Citrus Sinensis ID: 048136

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------56
MAATSKLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
cccccHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccEEEEEEEccccEEEEEEccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEcccccccccccccccccccEEEEcEEEccccEEEEEEccccccEEEccccccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccEEEEccccccccccccccccEEccEEEcccccEEEEccccccccccccccccccccEEEcccccccccEEEccccccccccccEEEEcccccEEEEccccccccccccccccccEEEEEEcccccccccccccEEEEcccccccccccEEEEEEEcccccccccEEEEEEccccccccccccccEEEEcEEEEEccccccEEEEEEEccccccccccccEEEEEEccccccccEEEEEc
ccHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccccccHHHHEEEcccccEEEEEEccccccccccccccccccccccccHHHccccccEEEEEEEccccccEEEEEcccccEcccccEccccEEEEEcccccccEEEEEEccccccccccccccHcccccccccEEcccccEEEEEcccccccccccccccccccccccHHHHccccccccccccEEEEcccccEEEEEccccEEEcccccEEEEEcccccccccccccccccEEEccccccccccccccEEEEEcccccccccccccccccccccccccEEEEccccccccccccccccccccEEEcccccEEEEEccccccccccccccccccEEEEccccHHHcEEEEcccccccccccEEEEEcccccEEEEEcccccccccccccccEEEEEEEccccccccccccccEEEEcccccEEEcccEEEEEEEcccccccccEEEEEEcccccEcccccccEEEEEEEEccccccccccEEEEEEccccccccccccEEEEEEEccccccEEEEEEc
MAATSKLVFILAVLLLVSGhqasaaanddpapyflgkwellpnnpgisamhsvllpnvdeMVIFDATVWQisrlplpdykrpcpmhqnkatnvtnidcwchsvfynvntlqvtplkvitdtwcssggldvngnlistggflggsrttrylwgcptcdwteyptalkdGRWYATQALLAdgsflifggrdsfsyeyipaertenaysipfqfLRDTYDVlennlypfvylvpdgnlyifannrsilldpranyvlreypplpggarnypststsvllplKLYRDYYARVDAEVLicggsvpeafyfgEVEKrlvpalddcarmvvtspdpvwttekmptprvmsdgvllptgdvLLINgaelgsagwkdadkpcfkpllykpskppgsrftelapsdiprmyHSVAnllpdgrvfvggsndndgyqewakfptelrlekfsppylapeladrrpmilvdetekaapygkwvGIKVKSAEMLNEFDLMVTmiappfvthsISMNQRLIELAIIEikndvypgVHEVVVamppsgniappgyYMLSVVLkgipspsmwfqvk
MAATSKLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPplpggarnypststSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVvtspdpvwttekmptprvmSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPllykpskppgsrFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDetekaapygkwVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
MAATSKLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
*****KLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLY*****************IPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWF***
****SKL*FILAVLLLVSGHQASAAANDDP*PYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
MAATSKLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
*AATSKLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
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iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAATSKLVFILAVLLLVSGHQASAAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEKAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query559 2.2.26 [Sep-21-2011]
P0CS93680 Galactose oxidase OS=Gibb no no 0.699 0.575 0.246 1e-13
I1S2N3680 Galactose oxidase OS=Gibb no no 0.699 0.575 0.246 2e-13
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1 Back     alignment and function desciption
 Score = 78.6 bits (192), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 177/447 (39%), Gaps = 56/447 (12%)

Query: 120 DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLAD 179
           D +C    +D NG ++ TGG          L+   +  W   P  ++  R Y + A ++D
Sbjct: 266 DMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSD 321

Query: 180 GSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLEN-NLYPFVYLVPDGNLYIF 238
           G     GG    S+     E+    YS   +    T+  L N  + P   L  D      
Sbjct: 322 GRVFTIGG----SWSGGVFEKNGEVYSPSSK----TWTSLPNAKVNPM--LTADKQGLYR 371

Query: 239 ANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGS 298
           ++N + L   +   V +  P     A N+  TS S  +     R     V  + + CG +
Sbjct: 372 SDNHAWLFGWKKGSVFQAGPST---AMNWYYTSGSGDVKSAGKRQSNRGVAPDAM-CGNA 427

Query: 299 V------PEAFYFGEVEKRLVPALDDCARMVV-----TSPDPVWTTEKMPTPRVMSDGVL 347
           V       +   FG             A ++      TSP+ V+ +  +   R     V+
Sbjct: 428 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVV 487

Query: 348 LPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANL 407
           LP G   +  G   G   ++D+  P F P +Y P +     F +  P+ I R+YHS++ L
Sbjct: 488 LPDGSTFITGGQRRGIP-FEDS-TPVFTPEIYVPEQ---DTFYKQNPNSIVRVYHSISLL 542

Query: 408 LPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELAD--RRPMILVDETEKAAP 465
           LPDGRVF GG     G             + F+P YL     +   RP I    T+    
Sbjct: 543 LPDGRVFNGG-----GGLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKV 597

Query: 466 YGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVV 525
            G+   I + +   +++  L+    A    TH+++ +QR I L +     + Y       
Sbjct: 598 GGR---ITISTDSSISKASLIRYGTA----THTVNTDQRRIPLTLTNNGGNSYS------ 644

Query: 526 VAMPPSGNIAPPGYYMLSVV-LKGIPS 551
             +P    +A PGY+ML V+   G+PS
Sbjct: 645 FQVPSDSGVALPGYWMLFVMNSAGVPS 671
Catalyzes the sterospecific oxidation of primary alcohols to the corresponding aldehydes. The biologically relevant substrate of the enzyme is not known as the enzyme exhibits broad substrate specificity from small alcohols through sugars to oligo- and polysaccharides.
Gibberella zeae (taxid: 5518)
EC: 1EC: .EC: 1EC: .EC: 3EC: .EC: 9
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query559
255546401613 Galactose oxidase precursor, putative [R 0.928 0.846 0.538 1e-164
15220398615 glyoxal oxidase-related protein [Arabido 0.926 0.842 0.536 1e-161
297841411599 hypothetical protein ARALYDRAFT_475824 [ 0.926 0.864 0.536 1e-160
224142169522 predicted protein [Populus trichocarpa] 0.928 0.994 0.517 1e-157
297812139596 hypothetical protein ARALYDRAFT_488852 [ 0.921 0.864 0.531 1e-157
19310437594 AT5g19580/T20D1_100 [Arabidopsis thalian 0.919 0.865 0.526 1e-156
15241135594 glyoxal oxidase-related protein [Arabido 0.919 0.865 0.526 1e-156
224119812609 predicted protein [Populus trichocarpa] 0.928 0.852 0.517 1e-156
225445162647 PREDICTED: galactose oxidase-like [Vitis 0.932 0.805 0.496 1e-152
297738786 900 unnamed protein product [Vitis vinifera] 0.930 0.577 0.497 1e-151
>gi|255546401|ref|XP_002514260.1| Galactose oxidase precursor, putative [Ricinus communis] gi|223546716|gb|EEF48214.1| Galactose oxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/527 (53%), Positives = 378/527 (71%), Gaps = 8/527 (1%)

Query: 34  FLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNV 93
           + G WEL+  N G+SAMH++LLP  D+++++DAT+W+IS+LPLP+ +  C +  NK T  
Sbjct: 94  YKGDWELVSQNSGVSAMHAILLPKTDKVLMYDATIWKISKLPLPNDE--CRV-LNKTTG- 149

Query: 94  TNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGC 153
            + DCWCHSV +++ T ++TPL++ TDTWCSSGGLDVNGNL+STGG+ GG+ T RYL  C
Sbjct: 150 -DKDCWCHSVLFDIKTSELTPLELHTDTWCSSGGLDVNGNLVSTGGYQGGANTVRYLSTC 208

Query: 154 PTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLR 213
             C+W EYPTAL D RWY+TQA L DG +++ GGRD+FSYEYIPAE   NA    F FLR
Sbjct: 209 VGCNWREYPTALADRRWYSTQATLPDGGYIVVGGRDAFSYEYIPAEGKSNAKPYFFDFLR 268

Query: 214 DTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTS 273
            T D  ENNLYPFV+L  DGN++IFAN+RS+LL+P++N ++RE+P LPGG RNYP+++  
Sbjct: 269 QTSDPEENNLYPFVFLSTDGNVFIFANSRSVLLNPKSNKIVREFPVLPGGHRNYPASAMC 328

Query: 274 VLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTT 333
            LLP+KL+ +    + +EVLICGGS     Y    +     AL DCAR+ +T+ DPVW  
Sbjct: 329 ALLPIKLHAENQQEIPSEVLICGGSAHRDAYSKAEKHIFYTALQDCARIKITAKDPVWKR 388

Query: 334 EKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA 393
           E MPTPR+M D ++LPTGDVLL+NGA+ G++GW  A +P F P+LY P    G RFTELA
Sbjct: 389 ELMPTPRIMGDMMILPTGDVLLLNGAKRGASGWGFAREPNFTPVLYNPRAKRGLRFTELA 448

Query: 394 PSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRP 453
           PS+I RMYHS + +LPDG+V VGGSN N+GY   A +PTELR+EK+SPPYL   LA +RP
Sbjct: 449 PSNIARMYHSSSAVLPDGKVLVGGSNTNNGYIYDAIYPTELRIEKYSPPYLNANLAAKRP 508

Query: 454 MILVDETEKAAPYGKWVGIKVKSAEM-LNEFDLMVTMIAPPFVTHSISMNQRLIELAIIE 512
            I+V        YG    +++K   + + + DL VTM AP F TH +SMNQRLI+L + +
Sbjct: 509 EIVV--VLPVLFYGGEFMVQIKLKGLKVEQQDLKVTMYAPAFTTHGVSMNQRLIDLGLKK 566

Query: 513 IKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQVK 559
           ++++   G+H +    PPS  IAPPGYYMLSVV +G+PS S W Q+K
Sbjct: 567 VESNPLLGLHSIASVAPPSSTIAPPGYYMLSVVYQGVPSVSKWVQIK 613

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15220398|ref|NP_176897.1| glyoxal oxidase-related protein [Arabidopsis thaliana] gi|9828629|gb|AAG00252.1|AC002130_17 F1N21.11 [Arabidopsis thaliana] gi|27754377|gb|AAO22637.1| putative glyoxal oxidase (glx1) [Arabidopsis thaliana] gi|28394059|gb|AAO42437.1| putative glyoxal oxidase (glx1) [Arabidopsis thaliana] gi|332196502|gb|AEE34623.1| glyoxal oxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297841411|ref|XP_002888587.1| hypothetical protein ARALYDRAFT_475824 [Arabidopsis lyrata subsp. lyrata] gi|297334428|gb|EFH64846.1| hypothetical protein ARALYDRAFT_475824 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224142169|ref|XP_002324431.1| predicted protein [Populus trichocarpa] gi|222865865|gb|EEF02996.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297812139|ref|XP_002873953.1| hypothetical protein ARALYDRAFT_488852 [Arabidopsis lyrata subsp. lyrata] gi|297319790|gb|EFH50212.1| hypothetical protein ARALYDRAFT_488852 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|19310437|gb|AAL84955.1| AT5g19580/T20D1_100 [Arabidopsis thaliana] gi|24797058|gb|AAN64541.1| At5g19580/T20D1_100 [Arabidopsis thaliana] gi|110742638|dbj|BAE99231.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15241135|ref|NP_197459.1| glyoxal oxidase-related protein [Arabidopsis thaliana] gi|332005344|gb|AED92727.1| glyoxal oxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224119812|ref|XP_002331167.1| predicted protein [Populus trichocarpa] gi|222873250|gb|EEF10381.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445162|ref|XP_002280698.1| PREDICTED: galactose oxidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738786|emb|CBI28031.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query559
TAIR|locus:2019564615 GLOX1 "AT1G67290" [Arabidopsis 0.924 0.840 0.539 2.3e-151
TAIR|locus:2180791594 AT5G19580 "AT5G19580" [Arabido 0.917 0.863 0.529 2.1e-148
TAIR|locus:2005664547 AT1G75620 "AT1G75620" [Arabido 0.905 0.925 0.463 3.3e-111
TAIR|locus:2035408548 AT1G19900 "AT1G19900" [Arabido 0.962 0.981 0.437 4.8e-110
TAIR|locus:2076696547 AT3G57620 "AT3G57620" [Arabido 0.962 0.983 0.411 1.7e-107
TAIR|locus:2084480545 AT3G53950 "AT3G53950" [Arabido 0.899 0.922 0.426 1.1e-105
UNIPROTKB|G4MQZ0669 MGG_02368 "Galactose oxidase" 0.397 0.331 0.282 2.3e-08
TAIR|locus:2019564 GLOX1 "AT1G67290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
 Identities = 283/525 (53%), Positives = 362/525 (68%)

Query:    36 GKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTN 95
             G+WEL   N G+SAMH++L+P ++++  +DAT+W+IS++ LP    PC +   K   V  
Sbjct:    96 GQWELFMKNSGVSAMHAILMPLINKVQFYDATIWRISQIKLPPGV-PCHVFDAKKNKV-- 152

Query:    96 IDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPT 155
              DCW HSV  ++NT  + PL + TDTWCSSGGL VNG L+STGGF GG+ T RYL  C  
Sbjct:   153 -DCWAHSVLVDINTGDIKPLALTTDTWCSSGGLTVNGTLVSTGGFQGGANTARYLSTCEN 211

Query:   156 CDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDT 215
             C W EYP AL   RWY+TQA L DG+F++ GGRD+ +YEYI  E   N      Q LR T
Sbjct:   212 CVWIEYPKALAARRWYSTQATLPDGTFIVVGGRDALNYEYILPEGQNNKKLYDSQLLRQT 271

Query:   216 YDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVL 275
              D  ENNLYPFV+L  DGNL+IFANNRSILL P+ N VL+E+P LPGGARNYP +++S L
Sbjct:   272 DDPEENNLYPFVWLNTDGNLFIFANNRSILLSPKTNKVLKEFPQLPGGARNYPGSASSAL 331

Query:   276 LPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK 335
             LP++LY    A + A+VL+CGG+  +A++  E  K    AL DCAR+ + S  PVW TE 
Sbjct:   332 LPIRLYVQNPAIIPADVLVCGGAKQDAYFRAERLKIYDWALKDCARLNINSAKPVWKTET 391

Query:   336 MPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPS 395
             MPT RVMSD V+LP G++L+INGA+ GS+GW  A +P F PLLYKP+KP G RF ELAPS
Sbjct:   392 MPTSRVMSDTVILPNGEILIINGAKRGSSGWHLAKEPNFAPLLYKPNKPLGQRFKELAPS 451

Query:   396 DIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMI 455
              IPR+YHS+A  LPDG+V VGGSN N+GYQ   ++PTELR+EKFSPPYL P LA+ RP I
Sbjct:   452 TIPRVYHSIAIALPDGKVLVGGSNTNNGYQFNVEYPTELRIEKFSPPYLDPALANMRPRI 511

Query:   456 LVDETEKAAPYGKWVGIKV--KSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEI 513
             +   T K   YG+   +K+  K   +  E ++MVTM+AP F THS+SMN RL+ L I  +
Sbjct:   512 VNTATPKQIKYGQMFDVKIELKQQNVAKE-NVMVTMLAPSFTTHSVSMNMRLLMLGINNV 570

Query:   514 KNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVLKGIPSPSMWFQV 558
             KN V    H++    PPSG +APPGYY+L  V  G+PS   W Q+
Sbjct:   571 KN-VGGDNHQIQAVAPPSGKLAPPGYYLLFAVYNGVPSVGEWIQI 614
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2180791 AT5G19580 "AT5G19580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005664 AT1G75620 "AT1G75620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035408 AT1G19900 "AT1G19900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076696 AT3G57620 "AT3G57620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084480 AT3G53950 "AT3G53950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MQZ0 MGG_02368 "Galactose oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT1G67290
glyoxal oxidase-related; glyoxal oxidase-related; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 10 plant structures; EXPRESSED DURING- L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Galactose oxidase/kelch, beta-propeller (InterPro-IPR011043), Galactose oxidase, beta-propeller (InterPro-IPR015916), Immunoglobulin E-set (InterPro-IPR014756), Glyoxal oxidase, N-terminal (InterPro-IPR009880), Region of u [...] (615 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT4G12920
aspartyl protease family protein; aspartyl protease family protein; FUNCTIONS IN- aspartic-type [...] (389 aa)
      • 0.819
AT2G47050
invertase/pectin methylesterase inhibitor family protein; invertase/pectin methylesterase inhib [...] (216 aa)
      • 0.819
AT1G62220
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (153 aa)
      • 0.679
AT1G62080
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (150 aa)
      • 0.679
AT3G14067
subtilase family protein; subtilase family protein; FUNCTIONS IN- identical protein binding, se [...] (777 aa)
      • 0.599
AT1G62500
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein; protease inhibitor [...] (297 aa)
      • 0.599
AT1G62060
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (150 aa)
      • 0.595
RPS11-BETA
RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structural constituent of ribosome; Encodes a putative [...] (159 aa)
      • 0.540
AT4G27170
2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4; 2S seed storage pr [...] (166 aa)
      • 0.537
AT4G22080
pectate lyase family protein; pectate lyase family protein; FUNCTIONS IN- lyase activity, pecta [...] (394 aa)
      • 0.504

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query559
pfam07250243 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-termi 1e-102
cd02851103 cd02851, E_set_GO_C, C-terminal Early set domain a 1e-21
pfam0911897 pfam09118, DUF1929, Domain of unknown function (DU 8e-20
>gnl|CDD|219349 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-terminus Back     alignment and domain information 
 Score =  307 bits (787), Expect = e-102
 Identities = 124/251 (49%), Positives = 158/251 (62%), Gaps = 11/251 (4%)

Query: 50  MHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNT 109
           MH  LL N +++++FD T +  S + LP    P     +       IDC  HSV Y+V T
Sbjct: 1   MHMQLLHN-NKVIMFDRTNFGPSNISLP----PGRCRPDPGDAPLKIDCSAHSVLYDVAT 55

Query: 110 LQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGC---PTCDWTEYPTALK 166
             + PL V TDTWCSSG L  +G L+ TGG   G R  RY   C    TCDW E+P  L 
Sbjct: 56  NTIRPLTVQTDTWCSSGALLSDGTLVQTGGDGDGERKVRYFSPCDSNDTCDWIEFPATLA 115

Query: 167 DGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPF 226
             RWYAT  +L DGSF+I GGR +F+YE+ P +  +N  +   +FLR+T D  ENNLYPF
Sbjct: 116 ARRWYATNQILPDGSFIIIGGRRAFNYEFFPKK-GQNPRASALRFLRETEDSQENNLYPF 174

Query: 227 VYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYA 286
           V+L+PDGNL+IFANNRSIL D R N V++E+P +PGG RNYPS+ +SVLLPL        
Sbjct: 175 VFLLPDGNLFIFANNRSILFDYRKNTVVKEFPQIPGGPRNYPSSGSSVLLPLDDRNP--D 232

Query: 287 RVDAEVLICGG 297
            + AEVL+CGG
Sbjct: 233 NLTAEVLVCGG 243

This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. Length = 243
>gnl|CDD|199882 cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase Back     alignment and domain information
>gnl|CDD|220118 pfam09118, DUF1929, Domain of unknown function (DUF1929) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 559
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
cd02851101 Galactose_oxidase_C_term Galactose oxidase C-termi 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PF0911898 DUF1929: Domain of unknown function (DUF1929); Int 100.0
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.97
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.97
PHA02790480 Kelch-like protein; Provisional 99.96
PLN02153341 epithiospecifier protein 99.96
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.96
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.96
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.95
PHA03098534 kelch-like protein; Provisional 99.95
PLN02153341 epithiospecifier protein 99.95
PHA02790480 Kelch-like protein; Provisional 99.95
PLN02193470 nitrile-specifier protein 99.95
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.94
PHA03098534 kelch-like protein; Provisional 99.93
PLN02193470 nitrile-specifier protein 99.93
KOG4693392 consensus Uncharacterized conserved protein, conta 99.75
KOG4693392 consensus Uncharacterized conserved protein, conta 99.73
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.56
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.42
KOG1230521 consensus Protein containing repeated kelch motifs 99.34
COG3055381 Uncharacterized protein conserved in bacteria [Fun 99.27
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.2
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.12
KOG1230521 consensus Protein containing repeated kelch motifs 99.09
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 98.98
COG3055381 Uncharacterized protein conserved in bacteria [Fun 98.95
PF1396450 Kelch_6: Kelch motif 98.75
PF1396450 Kelch_6: Kelch motif 98.46
smart0061247 Kelch Kelch domain. 98.42
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.32
smart0061247 Kelch Kelch domain. 98.17
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 98.04
PF1341549 Kelch_3: Galactose oxidase, central domain 98.01
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 98.01
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 97.86
PF1341549 Kelch_3: Galactose oxidase, central domain 97.77
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 97.53
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.42
KOG0286343 consensus G-protein beta subunit [General function 97.28
PLN02772 398 guanylate kinase 97.2
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 97.02
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 97.01
PLN02772398 guanylate kinase 96.78
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 96.76
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 95.79
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 95.49
KOG0310487 consensus Conserved WD40 repeat-containing protein 95.36
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 95.22
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 95.21
PRK13684334 Ycf48-like protein; Provisional 95.02
PF1385442 Kelch_5: Kelch motif 94.98
KOG0310487 consensus Conserved WD40 repeat-containing protein 94.96
KOG0315311 consensus G-protein beta subunit-like protein (con 94.95
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 94.78
KOG0315311 consensus G-protein beta subunit-like protein (con 94.2
PRK11028330 6-phosphogluconolactonase; Provisional 93.63
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 93.61
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 92.63
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 92.62
PRK11028330 6-phosphogluconolactonase; Provisional 92.51
PF1385442 Kelch_5: Kelch motif 92.4
PLN00181793 protein SPA1-RELATED; Provisional 91.96
KOG2437723 consensus Muskelin [Signal transduction mechanisms 91.89
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 91.87
KOG0271480 consensus Notchless-like WD40 repeat-containing pr 90.13
COG1520370 FOG: WD40-like repeat [Function unknown] 88.67
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 88.41
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 88.16
KOG2437723 consensus Muskelin [Signal transduction mechanisms 87.68
KOG0278334 consensus Serine/threonine kinase receptor-associa 86.74
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 86.3
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 85.27
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 85.08
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 85.07
KOG0286343 consensus G-protein beta subunit [General function 84.72
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 84.15
KOG0266456 consensus WD40 repeat-containing protein [General 83.83
KOG0649325 consensus WD40 repeat protein [General function pr 82.61
PTZ00421493 coronin; Provisional 81.6
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information 
Probab=100.00  E-value=8.5e-45  Score=354.69  Aligned_cols=237  Identities=45%  Similarity=0.819  Sum_probs=209.7

Q ss_pred             eEEEeecCCCeEEEEecccccccCCCCCCCCCCCCcc-ccccccccCCccceeeEEEeCCCCCEEeCccCCCcccccCee
Q 048136           50 MHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMH-QNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGL  128 (559)
Q Consensus        50 ~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~  128 (559)
                      ||++|+ +++||+++++.+.|+|++.||+  |+||.+ .+.   ..+.||++|+.+||+.|++++++...++.||+++++
T Consensus         1 mh~~~~-~~~~v~~~d~t~~g~s~~~~~~--~~c~~~~~~~---~~~~d~~a~s~~yD~~tn~~rpl~v~td~FCSgg~~   74 (243)
T PF07250_consen    1 MHMALL-HNNKVIMFDRTNFGPSNISLPD--GRCRDNPEDN---ALKFDGPAHSVEYDPNTNTFRPLTVQTDTFCSGGAF   74 (243)
T ss_pred             CeEeEc-cCCEEEEEeCCCcccccccCCC--CccccCcccc---ccccCceEEEEEEecCCCcEEeccCCCCCcccCcCC
Confidence            799999 9999999999999999999999  999976 322   236799999999999999999999999999999999


Q ss_pred             cCCCcEEEEcCCCCCCCeEEEEeCCC---CCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEEcCCCCCCCc
Q 048136          129 DVNGNLISTGGFLGGSRTTRYLWGCP---TCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAY  205 (559)
Q Consensus       129 l~dG~i~v~GG~~~g~~~v~~ydp~~---t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~yP~~~~~~~w  205 (559)
                      ++||+++++||+.+|.+.++.|+|+.   +++|.+.++.|..+|||+++++|+||+|+|+||+..+++|+||+... ...
T Consensus        75 L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~-~~~  153 (243)
T PF07250_consen   75 LPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGP-GPG  153 (243)
T ss_pred             CCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccC-CCC
Confidence            99999999999988889999999983   38899987669999999999999999999999999999999976431 122


Q ss_pred             ceeccccccccccccCCccceEEEeeCCcEEEEecCcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccc--ccccc
Q 048136          206 SIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPL--KLYRD  283 (559)
Q Consensus       206 ~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl--~~~~~  283 (559)
                      ...++++.++.+..+.++||++++++||+||+++++..++||++++++.+.+|.||++.|+||.+|++|||||  .+   
T Consensus       154 ~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n~v~~~lP~lPg~~R~YP~sgssvmLPl~~~~---  230 (243)
T PF07250_consen  154 PVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTNTVVRTLPDLPGGPRNYPASGSSVMLPLTDTP---  230 (243)
T ss_pred             ceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEEeCCCCeEEeeCCCCCCCceecCCCcceEEecCccCC---
Confidence            3345667666566788999999999999999999999999999999997789999999999999999999999  43   


Q ss_pred             cccccCcEEEEEcC
Q 048136          284 YYARVDAEVLICGG  297 (559)
Q Consensus       284 ~~~~~~gkI~v~GG  297 (559)
                      + +.+..+|+||||
T Consensus       231 ~-~~~~~evlvCGG  243 (243)
T PF07250_consen  231 P-NNYTAEVLVCGG  243 (243)
T ss_pred             C-CCCCeEEEEeCC
Confidence            2 236899999998

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>cd02851 Galactose_oxidase_C_term Galactose oxidase C-terminus domain Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF09118 DUF1929: Domain of unknown function (DUF1929); InterPro: IPR015202 This domain adopts a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>COG1520 FOG: WD40-like repeat [Function unknown] Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG0649 consensus WD40 repeat protein [General function prediction only] Back     alignment and domain information
>PTZ00421 coronin; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query559
2wq8_A661 Glycan Labelling Using Engineered Variants Of Galac 4e-15
2eic_A639 Crystal Structure Of Galactose Oxidase Mutant W290f 5e-15
2eib_A639 Crystal Structure Of Galactose Oxidase, W290h Mutan 9e-15
2eid_A639 Galactose Oxidase W290g Mutant Length = 639 1e-14
2eie_A639 Crystal Structure Of Galactose Oxidase Complexed Wi 1e-14
1t2x_A639 Glactose Oxidase C383s Mutant Identified By Directe 3e-14
1k3i_A656 Crystal Structure Of The Precursor Of Galactose Oxi 5e-14
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution Length = 661 Back     alignment and structure 
Iteration: 1

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 177/447 (39%), Gaps = 56/447 (12%)
Query: 120 DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLAD 179
           D +C    +D NG ++ TGG          L+   +  W   P  ++  R Y + A ++D
Sbjct: 247 DMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSD 302
Query: 180 GSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLEN-NLYPFVYLVPDGNLYIF 238
           G     GG  SFS      E+    YS   +    T+  L N  + P   L  D      
Sbjct: 303 GRVFTIGG--SFSGGVF--EKNGEVYSPSSK----TWTSLPNAKVNPM--LTADKQGLYK 352
Query: 239 ANNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGS 298
           ++N + L   +   V +  P     A N+  TS S  +     R     V  + + CG +
Sbjct: 353 SDNHAWLFGWKKGSVFQAGPST---AMNWYYTSGSGDVKSAGKRQSNRGVAPDAM-CGNA 408
Query: 299 V------PEAFYFGEVEKRLVPALDDCARMVV-----TSPDPVWTTEKMPTPRVMSDGVL 347
           V       +   FG             A ++      TSP+ V+ +  +   R     V+
Sbjct: 409 VMYDAVKGKILTFGGSPDYTDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVV 468
Query: 348 LPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANL 407
           LP G   +  G   G   ++D+  P F P +Y P +     F +  P+ I R YHS++ L
Sbjct: 469 LPDGSTFITGGQRRGII-FEDS-TPVFTPEIYVPEQ---DTFYKQNPNSIVRAYHSISLL 523
Query: 408 LPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELAD--RRPMILVDETEKAAP 465
           LPDGRVF GG     G             + F+P YL     +   RP I    T+    
Sbjct: 524 LPDGRVFNGG-----GGLCGDCTTNHFDAQIFTPNYLYDSNGNLATRPKITRTSTQSVKV 578
Query: 466 YGKWVGIKVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVV 525
            G+   I + +   +++  L+    A    TH+++ +QR I L +     + Y       
Sbjct: 579 GGR---ITISTDSSISKASLIRYGTA----THTVNTDQRRIPLTLTNNGGNSYS------ 625
Query: 526 VAMPPSGNIAPPGYYMLSVV-LKGIPS 551
             +P    +A PGY+ML V+   G+PS
Sbjct: 626 FQVPSDSGVALPGYWMLFVMNSAGVPS 652
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f Length = 639 Back     alignment and structure
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant Length = 639 Back     alignment and structure
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant Length = 639 Back     alignment and structure
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide Length = 639 Back     alignment and structure
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution Length = 639 Back     alignment and structure
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase Length = 656 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query559
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 5e-83
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 4e-05
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 Back     alignment and structure
 Score =  271 bits (692), Expect = 5e-83
 Identities = 102/546 (18%), Positives = 179/546 (32%), Gaps = 47/546 (8%)

Query: 24  AAANDDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPC 83
           A    +  P+       +      +A    L      + +                    
Sbjct: 145 AITEANGQPWTSIAEINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWS 204

Query: 84  PMHQNKATNVTNIDCWCHSVFYNVNT-LQVTPLKVITDTWCSSGGLDVNGNLISTGGFLG 142
               +             S   +       T      D +C    +D NG ++ TGG   
Sbjct: 205 SYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA 264

Query: 143 GSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAER-- 200
                  L+   +  W   P  ++  R Y + A ++DG     GG  S        E   
Sbjct: 265 KKT---SLYDSSSDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320

Query: 201 --TENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYVLREYP 258
             ++   S+P   +       +  LY       D + ++F   +  +     +  +  Y 
Sbjct: 321 PSSKTWTSLPNAKVNPMLTADKQGLYR-----SDNHAWLFGWKKGSVFQAGPSTAMNWYY 375

Query: 259 PLPGGA-RNYPSTSTSVLLPLKLYR---DYYARVDAEVLICGGSVPEAFYFGEVEKRLVP 314
               G  ++     ++  +           Y  V  ++L  GGS             ++ 
Sbjct: 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHII- 434

Query: 315 ALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCF 374
            L +      TSP+ V+ +  +   R     V+LP G   +  G   G         P F
Sbjct: 435 TLGEPG----TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE--DSTPVF 488

Query: 375 KPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTEL 434
            P +Y P +     F +  P+ I R+YHS++ LLPDGRVF GG                 
Sbjct: 489 TPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHF 540

Query: 435 RLEKFSPPYLAPELADRRPMILVDETE-KAAPYGKWVGIKVKSAEMLNEFDLMVTMIAPP 493
             + F+P YL     +      +  T  ++   G  + I   S+          ++I   
Sbjct: 541 DAQIFTPNYLYNSNGNLATRPKITRTSTQSVKVGGRITISTDSS------ISKASLIRYG 594

Query: 494 FVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVL-KGIPSP 552
             TH+++ +QR I L +         G +     +P    +A PGY+ML V+   G+PS 
Sbjct: 595 TATHTVNTDQRRIPLTL------TNNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSV 648

Query: 553 SMWFQV 558
           +   +V
Sbjct: 649 ASTIRV 654
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query559
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.98
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.97
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 99.97
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.97
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.97
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.96
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.94
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.92
3ow8_A321 WD repeat-containing protein 61; structural genomi 98.1
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 98.09
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 98.05
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 97.97
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.92
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.91
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 97.83
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.81
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.81
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 97.8
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 97.8
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 97.75
4e54_B435 DNA damage-binding protein 2; beta barrel, double 97.73
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.72
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.7
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.68
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 97.61
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.6
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.58
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 97.55
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 97.54
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 97.52
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 97.51
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 97.5
2ymu_A577 WD-40 repeat protein; unknown function, two domain 97.45
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 97.44
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 97.4
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 97.39
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 97.38
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.37
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 97.36
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.34
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 97.29
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 97.29
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 97.29
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.28
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 97.25
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 97.25
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 97.25
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 97.24
3jrp_A379 Fusion protein of protein transport protein SEC13 97.23
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 97.22
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 97.22
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 97.21
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 97.14
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 97.07
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 97.05
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 97.05
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 97.04
1nr0_A611 Actin interacting protein 1; beta propeller, WD40 97.04
2ymu_A577 WD-40 repeat protein; unknown function, two domain 97.03
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 96.99
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 96.99
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.98
3jrp_A379 Fusion protein of protein transport protein SEC13 96.96
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 96.94
4g56_B357 MGC81050 protein; protein arginine methyltransfera 96.93
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 96.92
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 96.92
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.92
2pm7_B297 Protein transport protein SEC13, protein transport 96.92
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 96.9
3jro_A 753 Fusion protein of protein transport protein SEC13 96.89
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 96.88
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 96.87
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 96.85
3sfz_A1249 APAF-1, apoptotic peptidase activating factor 1; a 96.84
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.84
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 96.81
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.79
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 96.79
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 96.78
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 96.77
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.76
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 96.75
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 96.75
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 96.75
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 96.73
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 96.7
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 96.67
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 96.67
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 96.65
2pm7_B297 Protein transport protein SEC13, protein transport 96.6
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 96.57
1nr0_A 611 Actin interacting protein 1; beta propeller, WD40 96.56
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 96.5
3jro_A 753 Fusion protein of protein transport protein SEC13 96.49
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 96.46
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 96.45
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 96.43
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 96.41
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 96.38
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 96.34
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 96.32
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 96.32
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 96.31
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 96.3
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 96.29
3v9f_A781 Two-component system sensor histidine kinase/RESP 96.28
4g56_B357 MGC81050 protein; protein arginine methyltransfera 96.28
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 96.22
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 96.14
4e54_B435 DNA damage-binding protein 2; beta barrel, double 96.12
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 96.11
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 96.09
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 96.09
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 96.06
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 96.01
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 95.94
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 95.85
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 95.82
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 95.8
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 95.74
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 95.73
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 95.72
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 95.7
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 95.65
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 95.65
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 95.61
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 95.49
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 95.45
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 95.4
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 95.38
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 95.31
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 95.29
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 95.29
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 95.29
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 95.25
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 95.24
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 95.24
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 95.17
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 95.11
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 94.92
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 94.91
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 94.84
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 94.84
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 94.83
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 94.7
3gre_A437 Serine/threonine-protein kinase VPS15; seven-blade 94.55
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 94.46
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 94.45
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 94.27
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 94.22
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 94.19
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 94.1
2xyi_A430 Probable histone-binding protein CAF1; transcripti 93.82
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 93.77
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 93.55
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 93.48
3mvd_K423 Regulator of chromosome condensation; protein-DNA 93.43
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 93.42
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 93.36
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 93.05
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 92.84
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 92.55
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 92.34
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 92.29
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 92.08
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 91.99
4a2l_A795 BT_4663, two-component system sensor histidine kin 91.79
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 91.37
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 91.29
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 90.64
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 90.47
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 89.69
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 89.24
2fp8_A322 Strictosidine synthase; six bladed beta propeller 88.99
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 88.65
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 88.0
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 87.39
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 87.26
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 86.37
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 86.36
2xyi_A430 Probable histone-binding protein CAF1; transcripti 85.67
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 85.03
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 84.67
2bkl_A695 Prolyl endopeptidase; mechanistic study, celiac sp 84.49
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 83.82
1qks_A567 Cytochrome CD1 nitrite reductase; enzyme, oxidored 83.6
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 81.62
3pe7_A388 Oligogalacturonate lyase; seven-bladed beta-propel 80.94
2p9w_A334 MAL S 1 allergenic protein; beta propeller; 1.35A 80.88
3kci_A389 Probable E3 ubiquitin-protein ligase HERC2; WD40, 80.73
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
Probab=100.00  E-value=5.1e-74  Score=647.61  Aligned_cols=452  Identities=22%  Similarity=0.322  Sum_probs=352.9

Q ss_pred             CCCCCCCCCcEEecCCCCCcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeC
Q 048136           28 DDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNV  107 (559)
Q Consensus        28 ~~~~~~~~g~W~~~~~~~~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp  107 (559)
                      .+.+++..++|+.+.+++ ....|+++++.+||||++||.+...  +.     +.             ......+.+||+
T Consensus       168 ~~~~dp~~~~W~~~~~~P-~~~~~~av~~~~g~l~v~GG~~~~~--~~-----~~-------------~~~~~~~~~yd~  226 (656)
T 1k3i_A          168 YTAPQPGLGRWGPTIDLP-IVPAAAAIEPTSGRVLMWSSYRNDA--FG-----GS-------------PGGITLTSSWDP  226 (656)
T ss_dssp             CCCCCTTSCEEEEEEECS-SCCSEEEEETTTTEEEEEEECCCTT--TC-----SC-------------CCSEEEEEEECT
T ss_pred             cccCCCCCCeeeeeccCC-CCceeEEEEecCCEEEEEecccccc--cc-----cC-------------CCCeEEEEEEeC
Confidence            445677899999988875 4677888883399999999975210  00     00             011245789999


Q ss_pred             CCCCEEeCccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEE
Q 048136          108 NTLQVTPLKVI---TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLI  184 (559)
Q Consensus       108 ~t~~w~~~~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~Vyv  184 (559)
                      .+++|++++.+   +..+|++.+++.||+||++||..+  .++++|||. +++|+++++ |+.+||+|++++++||+|||
T Consensus       227 ~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv  302 (656)
T 1k3i_A          227 STGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFT  302 (656)
T ss_dssp             TTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEE
T ss_pred             CCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc-CCceeECCC-CCccccccceEEecCCeEEE
Confidence            99999998766   456788788889999999999743  489999999 999999986 99999999999998999999


Q ss_pred             EcCC-CC----CceeEE-cCCCCCCCccee-----ccccccccccccCCccceEEEeeCCcEEEEec-----------Cc
Q 048136          185 FGGR-DS----FSYEYI-PAERTENAYSIP-----FQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-----------NR  242 (559)
Q Consensus       185 vGG~-~~----~s~E~y-P~~~~~~~w~~~-----~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-----------~~  242 (559)
                      +||. +.    .++|+| |.++   .|...     .|++..+        .. ..+..++++|++||           ..
T Consensus       303 ~GG~~~~~~~~~~~e~yd~~t~---~W~~~~~~~~~p~~~~~--------~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~  370 (656)
T 1k3i_A          303 IGGSWSGGVFEKNGEVYSPSSK---TWTSLPNAKVNPMLTAD--------KQ-GLYRSDNHAWLFGWKKGSVFQAGPSTA  370 (656)
T ss_dssp             ECCCCCSSSCCCCEEEEETTTT---EEEEETTSCSGGGCCCC--------TT-GGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred             EeCcccCCcccccceEeCCCCC---cceeCCCcccccccccc--------cc-ceeecCCceEEEECCCCcEEEecCccc
Confidence            9995 32    578999 8876   47764     4444321        11 12235888888885           34


Q ss_pred             EEEeeCCCCeEEEECCCCCCCC--CcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccC---
Q 048136          243 SILLDPRANYVLREYPPLPGGA--RNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALD---  317 (559)
Q Consensus       243 ~e~yDp~t~~W~~~~p~mp~~~--~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~---  317 (559)
                      +++||+.+++|.......+..+  ...++.+++++++.         .+++||++||.+....         ..+++   
T Consensus       371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~~---------~~~~~~~~  432 (656)
T 1k3i_A          371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQD---------SDATTNAH  432 (656)
T ss_dssp             EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSS---------SBCCCCEE
T ss_pred             eeeeecCCcceeecCCccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCCC---------CCcCCcce
Confidence            7899999999985332211000  01244577777652         4899999999752110         13445   


Q ss_pred             ceEEEEecCCCCceeee---cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCC
Q 048136          318 DCARMVVTSPDPVWTTE---KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAP  394 (559)
Q Consensus       318 s~~~~d~~~~~~~W~~~---~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~  394 (559)
                      ++++||+..  ++|+..   +|+.+|.++++++++||+|||+||...+. +|. +.+++.++|+|||+++   +|+.+++
T Consensus       433 ~v~~yd~~~--~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~  505 (656)
T 1k3i_A          433 IITLGEPGT--SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNP  505 (656)
T ss_dssp             EEECCSTTS--CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCC
T ss_pred             EEEcCCCCC--CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCC
Confidence            455666654  789874   89999999988899999999999986432 222 3456779999999999   9999999


Q ss_pred             CCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcceeeEEcCCCCCCC--cCCCCCcccccCCCCccCCCCeEEE
Q 048136          395 SDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPE--LADRRPMILVDETEKAAPYGKWVGI  472 (559)
Q Consensus       395 ~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Ppyl~~~--~~~~RP~i~~~~~p~~~~~g~~~~v  472 (559)
                      |+.+|.||+++++++||+|||+||+.++.+     .++++++|+|+||||+++  ..+.||+|++.+ |+.+.||++|+|
T Consensus       506 ~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~-----~~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~-~~~~~~g~~~~~  579 (656)
T 1k3i_A          506 NSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNYLYNSNGNLATRPKITRTS-TQSVKVGGRITI  579 (656)
T ss_dssp             CSSCCCTTEEEEECTTSCEEEEECCCCTTC-----SCCCCEEEEEECGGGBCTTSSBCCCCCEEEES-CSEEETTCEEEE
T ss_pred             CCCccccccHhhcCCCcEEEecCCCCCCCC-----CCCeeEEEEEeChhhccCCCCcCCCCcccccC-CceecCCCEEEE
Confidence            999999999999999999999999887643     235789999999999753  456799999843 889999999999


Q ss_pred             EEEeccccccceEEEEEEcCCcccccccCCcceEEeeeeeeecccCCCcEEEEEEcCCCCCccCCcceEEEEEc-CCCCC
Q 048136          473 KVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVL-KGIPS  551 (559)
Q Consensus       473 ~~~~~~~~~~~~~~v~l~~~~~~TH~~~~~qR~v~l~~~~~~~~~~~g~~~~~v~~P~~~~~~ppG~ymlf~~~-~gvPS  551 (559)
                      +++.      .+.+|+|||++|+||++|||||+|+|+++..      |+.+++|++|+|++||||||||||||+ +||||
T Consensus       580 ~~~~------~~~~~~l~~~~~~th~~~~~qr~~~l~~~~~------~~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps  647 (656)
T 1k3i_A          580 STDS------SISKASLIRYGTATHTVNTDQRRIPLTLTNN------GGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPS  647 (656)
T ss_dssp             EESS------CCSEEEEEECCEEETTBCSSCCEEECCEEEE------ETTEEEEECCSCTTTSCSEEEEEEEECTTSCBC
T ss_pred             EEec------cceEEEEEecCccccCcCCCCcEEecceEec------CCCEEEEECCCCCCcCCCcCeEEEEECCCCccc
Confidence            9874      2578999999999999999999999999864      235789999999999999999999996 99999


Q ss_pred             ccEEEEeC
Q 048136          552 PSMWFQVK  559 (559)
Q Consensus       552 ~~~~v~i~  559 (559)
                      +|+||+|+
T Consensus       648 ~~~~v~~~  655 (656)
T 1k3i_A          648 VASTIRVT  655 (656)
T ss_dssp             CCEEEEEE
T ss_pred             ccEEEEEe
Confidence            99999984
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} Back     alignment and structure
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} Back     alignment and structure
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 559
d1k3ia3387 b.69.1.1 (A:151-537) Galactose oxidase, central do 1e-28
d1k3ia1102 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal 2e-19
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 Back     information, alignment and structure

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score =  115 bits (288), Expect = 1e-28
 Identities = 69/423 (16%), Positives = 132/423 (31%), Gaps = 60/423 (14%)

Query: 35  LGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVT 94
           LG+W    + P I    + + P    ++++ +                            
Sbjct: 8   LGRWGPTIDLP-IVPAAAAIEPTSGRVLMWSSYRND--------------------AFGG 46

Query: 95  NIDCWCHSVFYNVNT---LQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLW 151
           +      +  ++ +T      T      D +C    +D NG ++ TGG     +T+ Y  
Sbjct: 47  SPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN-DAKKTSLY-- 103

Query: 152 GCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPAERTENAY------ 205
              + D       ++  R Y + A ++DG     GG  S        E    +       
Sbjct: 104 -DSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 162

Query: 206 ---SIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRAN-YVLREYPPLP 261
               +      D   +  ++ + +++    G+++    + ++     +    ++      
Sbjct: 163 PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQ 222

Query: 262 GGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCAR 321
                 P       +     +                        +       A      
Sbjct: 223 SNRGVAPDAMCGNAVMYDAVKGKI------------LTFGGSPDYQDSDATTNAHIITLG 270

Query: 322 MVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKP 381
              TSP+ V+ +  +   R     V+LP G   +  G   G     +   P F P +Y P
Sbjct: 271 EPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVP 328

Query: 382 SKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSP 441
            +     F +  P+ I R+YHS++ LLPDGRVF GG                   + F+P
Sbjct: 329 EQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTP 380

Query: 442 PYL 444
            YL
Sbjct: 381 NYL 383
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 102 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query559
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 100.0
d1k3ia1102 Galactose oxidase, C-terminal domain {Fungi (Fusar 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.96
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 99.95
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 98.09
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.79
d1tbga_340 beta1-subunit of the signal-transducing G protein 97.49
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.48
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 97.44
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 97.08
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 97.08
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 96.87
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 96.81
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 96.77
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 96.73
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 96.66
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 96.55
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 96.26
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 96.12
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 95.57
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 95.52
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 95.2
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 95.06
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 94.68
d1tbga_340 beta1-subunit of the signal-transducing G protein 94.55
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 94.43
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 94.17
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 94.02
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 93.64
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 93.04
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 92.75
d1yfqa_342 Cell cycle arrest protein BUB3 {Baker's yeast (Sac 91.84
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 91.29
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 91.06
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 90.72
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 90.39
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 90.22
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 88.12
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 87.68
d1a12a_401 Regulator of chromosome condensation RCC1 {Human ( 86.88
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 86.74
d1p22a2293 F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom 86.35
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 84.03
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 83.73
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 82.27
d1yfqa_342 Cell cycle arrest protein BUB3 {Baker's yeast (Sac 81.14
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 81.05
d2ghsa1295 Regucalcin {Agrobacterium tumefaciens [TaxId: 358] 80.89
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 80.75
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=100.00  E-value=3.3e-48  Score=403.13  Aligned_cols=358  Identities=21%  Similarity=0.321  Sum_probs=265.6

Q ss_pred             CCCCcEEecCCCCCcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeCCCCCE
Q 048136           33 YFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQV  112 (559)
Q Consensus        33 ~~~g~W~~~~~~~~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w  112 (559)
                      +..|+|+...+++ ..+.|+++++.+||||++||....  .+  .   +             .......+++|||++++|
T Consensus         6 p~~g~W~~~~~~p-~~~~~~a~~~~~gkv~v~GG~~~~--~~--~---~-------------~~~~~~~~~~yd~~t~~w   64 (387)
T d1k3ia3           6 PGLGRWGPTIDLP-IVPAAAAIEPTSGRVLMWSSYRND--AF--G---G-------------SPGGITLTSSWDPSTGIV   64 (387)
T ss_dssp             TTSCEEEEEEECS-SCCSEEEEETTTTEEEEEEECCCT--TT--C---S-------------CCCSEEEEEEECTTTCCB
T ss_pred             CCCCccCCcCCCC-ccccEEEEEeeCCEEEEEEeecCc--cc--C---C-------------CCCceeEEEEEECCCCcE
Confidence            5689999988874 556666666589999999997421  11  0   0             011234578999999999


Q ss_pred             EeCccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCC
Q 048136          113 TPLKVI---TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRD  189 (559)
Q Consensus       113 ~~~~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~  189 (559)
                      +.++.+   +..+|++++++.||+||++||..  .+++++|||. +++|++++. |+.+||+|+++++.||+||++||..
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~--~~~~~~yd~~-~~~w~~~~~-~~~~r~~~~~~~~~dG~v~v~GG~~  140 (387)
T d1k3ia3          65 SDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSW  140 (387)
T ss_dssp             CCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TTCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCC
T ss_pred             eecCCCCCCcccceeEEEEecCCcEEEeecCC--CcceeEecCc-cCccccccc-ccccccccceeeecCCceeeecccc
Confidence            987644   56789999999999999999973  4789999999 999999986 9999999999999999999999975


Q ss_pred             C-----CceeEE-cCCCCCCCcceeccccccc---cc---cccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEE
Q 048136          190 S-----FSYEYI-PAERTENAYSIPFQFLRDT---YD---VLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLR  255 (559)
Q Consensus       190 ~-----~s~E~y-P~~~~~~~w~~~~p~l~~~---~d---~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~  255 (559)
                      .     .++|+| |.++   .|....++....   ..   ......++.++...+|++|++|+.  ..+.||+.++.|. 
T Consensus       141 ~~~~~~~~v~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~-  216 (387)
T d1k3ia3         141 SGGVFEKNGEVYSPSSK---TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK-  216 (387)
T ss_dssp             CSSSCCCCEEEEETTTT---EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE-
T ss_pred             ccccccceeeeecCCCC---ceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEe-
Confidence            4     468999 8886   476543321110   00   012235677778889999999985  4678999999998 


Q ss_pred             ECCCCCCCCCc--ccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCC---CCc
Q 048136          256 EYPPLPGGARN--YPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSP---DPV  330 (559)
Q Consensus       256 ~~p~mp~~~~~--~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~---~~~  330 (559)
                      ..+.++.....  .++.+.+++++.         .++|||++||.......         ......+.++....   ...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~g~v~v~GG~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  278 (387)
T d1k3ia3         217 SAGKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQDS---------DATTNAHIITLGEPGTSPNT  278 (387)
T ss_dssp             EEEECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSSS---------BCCCCEEEEECCSTTSCCEE
T ss_pred             eccccccCcccCcccccccEEEeec---------cCCceEEEEeccCCCCC---------cccceeecccccccccCCCc
Confidence            45544432111  223456666542         48999999997632211         12233444554432   235


Q ss_pred             eeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECC
Q 048136          331 WTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLP  409 (559)
Q Consensus       331 W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llp  409 (559)
                      |+.. +|+.+|.++++++++||+|||+||...+...  ....+++++|+|||+++   +|+.+++|+.+|.+||+++|++
T Consensus       279 ~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~--~~~~~~~~ve~Ydp~~~---~W~~~~~~~~~R~~Hs~a~l~~  353 (387)
T d1k3ia3         279 VFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLP  353 (387)
T ss_dssp             EECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT--CCCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECT
T ss_pred             eeeccccccccccceeeeccCCeEEEECCcccCccC--CCCcEeceEEEEECCCC---eEEECCCCCCcccceEEEEECC
Confidence            6665 9999999999999999999999998743321  23456778999999999   9999999999999999999999


Q ss_pred             CCceEEeCCCCCCCCcccCCCCCcceeeEEcCCCCCCC
Q 048136          410 DGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPE  447 (559)
Q Consensus       410 dG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Ppyl~~~  447 (559)
                      ||||||+||+.++.     ....+.++|+|+|||||.+
T Consensus       354 dG~v~v~GG~~~~~-----~~~~~~~~e~y~Ppyl~~~  386 (387)
T d1k3ia3         354 DGRVFNGGGGLCGD-----CTTNHFDAQIFTPNYLYNS  386 (387)
T ss_dssp             TSCEEEEECCCCTT-----CSCCCCEEEEEECGGGBCT
T ss_pred             CCEEEEEeCCCcCC-----CCcccceEEEEcchhccCC
Confidence            99999999986653     2235779999999999864
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure