Citrus Sinensis ID: 048307

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
Protein Sequence
MTNDEENPLIGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVNETEVQETWSDKARAGGQAARGMQEKTHATREVLI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHEEEEEEEEEEEEEcccccccccccEEEEccEEEcccEEEEccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHEEcccccccccccccccccccHHHHHHcccccccccHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEEEcccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHEccccccccccccccccccccHHHHHccccccccccHHcccccEHcc
Coil and Loop (DISEMBL)
mtndeenpligkinpRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSavgvlpcgscfkfidhdlLTFVTMRRFASAAIIVYLSLFAnselsiavspflhqpwpliKTWFSLLTILGGSLLYIMGEMSKLKheitnksdwysfEVILplgfscffggftvlggavNKSLNVVINLAFWDKHSTRVGTLGLLICMLggvtyqqsptnkpravneteVQETWSDKARAGGQAARGMQEKTHATREVLI
Flexible Loop (DISEMBL)
mtndeenpligkinprIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTyqqsptnkpravnetevqetwsdkaraggqaargmqekthatrevli
Low Complexity Region (SEG)
MTNDEENPLIGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVNETEVQETWSDKaraggqaargMQEKTHATREVLI
Disordered region (IsUnstruct)
*********IGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTY**********************************************
Disordered Region (DISOPRED)
*************************SLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVT********************************************VLI
Disordered Region (DISEMBL)
********LIGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQ*********************************************
Disordered Region (DISPRO)
******************RMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQS*******************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTNDEENPLIGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVNETEVQETWSDKARAGGQAARGMQEKTHATREVLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	271	2.2.26 [Sep-21-2011]
Q9S845	372	GDP-mannose transporter G	yes	no	0.549	0.400	0.532	1e-39
Q84L08	341	GDP-mannose transporter G	no	no	0.767	0.609	0.316	6e-22

>sp|Q9S845|GONS3_ARATH GDP-mannose transporter GONST3 OS=Arabidopsis thaliana GN=GONST3 PE=2 SV=1

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 108/171 (63%), Gaps = 22/171 (12%)

Query: 2   TNDEENPLIGKI-NPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAY 60
           TNDEEN  + ++ N       TWY+    +AS+YGVAAGYCLSASLL+IINKWA MKF Y
Sbjct: 3   TNDEENGTVIEVKNVPEPSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPY 62

Query: 61  PEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSEL---- 116
           P ALTA++Y TSA GVL C    K I+HD L  +TM RF  AA+I YLSLF NSEL    
Sbjct: 63  PGALTAMQYFTSAAGVLLCAQ-MKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSELLLHA 121

Query: 117 ----------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
                           +I  + FLHQPWP +KTW SL TI GGSLLY+  +
Sbjct: 122 NVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTD 172

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84L08|GONS4_ARATH GDP-mannose transporter GONST4 OS=Arabidopsis thaliana GN=GONST4 PE=2 SV=1

 Score =  104 bits (260), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 130/310 (41%), Gaps = 102/310 (32%)

Query: 39  GYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRR 98
           GY L +SLLA+INK A   F YP  LTAL+YLT  V V   G     I+HD  T+ T ++
Sbjct: 20  GYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYLLGKS-GLINHDPFTWDTAKK 78

Query: 99  FASAAIIVYLSLFANSEL--------------------SIAVSPFLHQPWPLIKTWFSLL 138
           F  AAI+ YL++F N+ L                    +IA + F  QP P   T+ SL+
Sbjct: 79  FLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIADTVFRSQPLPSRLTFLSLV 138

Query: 139 TILGGSLLY---------------------IMGEMSKLKHEITN---------------- 161
            IL G++ Y                     I  EM  +KH ++N                
Sbjct: 139 VILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHMVSNIKLNIWGLVLYNNLLS 198

Query: 162 ----KSDWY---SFEVIL------------PLGF-----SCFFG---------------- 181
                  W+    F  +             P  F     SC FG                
Sbjct: 199 LMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFSSVAASCVFGFLISYFGFAARNAISA 258

Query: 182 -GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQS-PTNKP-RAVNE 238
             FTV  G VNK L VVIN+  WDKH+T VG + LL  + GGV YQQS   +KP   V+E
Sbjct: 259 TAFTV-TGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGGVGYQQSVKLDKPIEKVSE 317

Query: 239 TEVQETWSDK 248
            + ++   D+
Sbjct: 318 KDSEKGEEDE 327

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
357469005	650	GDP-mannose transporter [Medicago trunca	0.867	0.361	0.428	5e-57
359490162	422	PREDICTED: LOW QUALITY PROTEIN: GDP-mann	0.885	0.568	0.409	1e-51
296084219	341	unnamed protein product [Vitis vinifera]	0.841	0.668	0.409	4e-51
296089237	389	unnamed protein product [Vitis vinifera]	0.553	0.385	0.519	2e-39
225444217	374	PREDICTED: GDP-mannose transporter GONST	0.553	0.401	0.519	3e-39
255547792	392	GDP-mannose transporter, putative [Ricin	0.553	0.382	0.516	4e-39
147821912	626	hypothetical protein VITISV_022803 [Viti	0.553	0.239	0.514	1e-38
224107633	371	predicted protein [Populus trichocarpa]	0.553	0.404	0.511	3e-38
15223013	372	golgi nucleotide sugar transporter 3 [Ar	0.549	0.400	0.532	7e-38
297842389	372	integral membrane family protein [Arabid	0.549	0.400	0.532	3e-37

>gi|357469005|ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula] gi|355505842|gb|AES86984.1| GDP-mannose transporter [Medicago truncatula]

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 174/336 (51%), Gaps = 101/336 (30%)

Query: 5   EENPLIGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEAL 64
           E+NP    +N        WY S+ H+ S+YGVAAGYCLSASLL+IINKWA MKF YP AL
Sbjct: 201 EKNP-TSNMNVNDGVAGNWYTSIVHQVSVYGVAAGYCLSASLLSIINKWAVMKFPYPGAL 259

Query: 65  TALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSEL-------- 116
           TAL+Y TSA GVL CG   K ++HD L  +TM RF  AA+I YLSLF NSEL        
Sbjct: 260 TALQYFTSAAGVLLCG-WLKVVEHDKLDLMTMWRFLPAAVIFYLSLFTNSELLLHANVDT 318

Query: 117 ------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGEMS----------- 153
                       ++  S FLH+PWP +KTW SL TI  GS+LY+  +             
Sbjct: 319 FIVFRSPVPIFVAVGESVFLHRPWPSLKTWASLGTIFAGSVLYVATDYQFTFAAYMWAVA 378

Query: 154 ----------KLKHEIT---------------------------------------NKSD 164
                      +KH +T                                       ++SD
Sbjct: 379 YLVSMTIDFVYIKHVVTTIELNTWGLVLYNNIEALLLFPLELLIMGELKKIKHEITDESD 438

Query: 165 WYSFEVILPLGFSCFFG-----------------GFTVLGGAVNKSLNVVINLAFWDKHS 207
           W+SF V+LP+  SC FG                 GFTVL G VNK L V+INL  WDKHS
Sbjct: 439 WHSFPVVLPVALSCLFGVAISFFGFSCRRAISATGFTVL-GIVNKLLTVMINLVIWDKHS 497

Query: 208 TRVGTLGLLICMLGGVTYQQSPTNKPRAVNETEVQE 243
           T VGT+GLLICMLGGV YQQS T+KP+A  +   QE
Sbjct: 498 TWVGTVGLLICMLGGVMYQQS-TSKPKAAIQETRQE 532

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490162|ref|XP_003634045.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose transporter GONST3-like [Vitis vinifera]

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/352 (40%), Positives = 175/352 (49%), Gaps = 112/352 (31%)

Query: 1   MTNDEENPLIGKINPR---------IARMMTWYNSLGHRASIYGVAAGYCLSASLLAIIN 51
           M+NDEENP    + PR              T   +L  +ASIYGVA GYC+SASLL+IIN
Sbjct: 1   MSNDEENP--KAVEPRKGSETLSSSTQNPATCCKALLRQASIYGVALGYCISASLLSIIN 58

Query: 52  KWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLF 111
           KWA M+F YP ALTAL+Y TS  GVL  G   K IDH  L   T+ RF  AA++ Y+S+F
Sbjct: 59  KWAVMRFPYPGALTALQYFTSVAGVL-IGGWLKLIDHGGLHGHTLWRFFPAAVLFYISIF 117

Query: 112 ANSEL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
            NSEL                    ++  + FLHQPWP +KTW SL TI GGS+LY++ +
Sbjct: 118 TNSELLLHSNVDTFIVVRSAVPIFVAVGETLFLHQPWPSVKTWLSLATIFGGSVLYVLTD 177

Query: 152 -----------------MS----KLKHEITN--------------------------KSD 164
                            MS     +KH + N                            +
Sbjct: 178 NQFSVMAYSWGVAYLVSMSIDFVYIKHVVMNIGLKTWGLVLYNNLEALLLFPLELLVMGE 237

Query: 165 W------------YSFEVILPLGFSCFFG-----------------GFTVLGGAVNKSLN 195
           W            YSFEV+LP+G SC FG                 GFTVL G VNK L 
Sbjct: 238 WEKLRHEVHEWNWYSFEVVLPVGLSCLFGLSISFFGFSCRRVISATGFTVL-GTVNKLLT 296

Query: 196 VVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNK---PRAVNETEVQET 244
           VVINL  WDKHS  VGT+GLLICM+GGV YQQS +NK   P A     VQ++
Sbjct: 297 VVINLVVWDKHSKFVGTVGLLICMMGGVMYQQSTSNKSLRPAAKKXRIVQDS 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084219|emb|CBI24607.3| unnamed protein product [Vitis vinifera]

 Score =  207 bits (527), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/337 (40%), Positives = 167/337 (49%), Gaps = 109/337 (32%)

Query: 1   MTNDEENPLIGKINPR---------IARMMTWYNSLGHRASIYGVAAGYCLSASLLAIIN 51
           M+NDEENP    + PR              T   +L  +ASIYGVA GYC+SASLL+IIN
Sbjct: 1   MSNDEENP--KAVEPRKGSETLSSSTQNPATCCKALLRQASIYGVALGYCISASLLSIIN 58

Query: 52  KWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLF 111
           KWA M+F YP ALTAL+Y TS  GVL  G   K IDH  L   T+ RF  AA++ Y+S+F
Sbjct: 59  KWAVMRFPYPGALTALQYFTSVAGVL-IGGWLKLIDHGGLHGHTLWRFFPAAVLFYISIF 117

Query: 112 ANSEL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMG- 150
            NSEL                    ++  + FLHQPWP +KTW SL TI GGS+LY++  
Sbjct: 118 TNSELLLHSNVDTFIVVRSAVPIFVAVGETLFLHQPWPSVKTWLSLATIFGGSVLYVLTD 177

Query: 151 --------------------EMSKLKHEITN--------------------------KSD 164
                               +   +KH + N                            +
Sbjct: 178 NQFSVMAYSWGVAYLVSMSIDFVYIKHVVMNIGLKTWGLVLYNNLEALLLFPLELLVMGE 237

Query: 165 W------------YSFEVILPLGFSCFFG-----------------GFTVLGGAVNKSLN 195
           W            YSFEV+LP+G SC FG                 GFTVL G VNK L 
Sbjct: 238 WEKLRHEVHEWNWYSFEVVLPVGLSCLFGLSISFFGFSCRRVISATGFTVL-GTVNKLLT 296

Query: 196 VVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNK 232
           VVINL  WDKHS  VGT+GLLICM+GGV YQQS +NK
Sbjct: 297 VVINLVVWDKHSKFVGTVGLLICMMGGVMYQQSTSNK 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089237|emb|CBI39009.3| unnamed protein product [Vitis vinifera]

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/177 (51%), Positives = 113/177 (63%), Gaps = 27/177 (15%)

Query: 1   MTNDEENPLI-----GKINPRIARMM-TWYNSLGHRASIYGVAAGYCLSASLLAIINKWA 54
           M+NDEENP +     G  NP  + +  TWY+    +ASIYG+AAGYC+SASLL+IINKWA
Sbjct: 16  MSNDEENPKVRASQKGPENPSSSEIQATWYSGFLQQASIYGIAAGYCISASLLSIINKWA 75

Query: 55  TMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANS 114
            MKF YP ALTAL+Y TSA GV+ CG  FK I+HD L   TM RF  AA+I YLSLF NS
Sbjct: 76  VMKFPYPGALTALQYFTSAAGVVICG-WFKIIEHDPLDRSTMWRFLPAAVIFYLSLFTNS 134

Query: 115 EL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
           EL                    +I  + +L QPWP +KTW SL TI GGS+LY++ +
Sbjct: 135 ELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLSLATIFGGSVLYVLTD 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444217|ref|XP_002271444.1| PREDICTED: GDP-mannose transporter GONST3-like [Vitis vinifera]

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/177 (51%), Positives = 113/177 (63%), Gaps = 27/177 (15%)

Query: 1   MTNDEENPLI-----GKINPRIARMM-TWYNSLGHRASIYGVAAGYCLSASLLAIINKWA 54
           M+NDEENP +     G  NP  + +  TWY+    +ASIYG+AAGYC+SASLL+IINKWA
Sbjct: 1   MSNDEENPKVRASQKGPENPSSSEIQATWYSGFLQQASIYGIAAGYCISASLLSIINKWA 60

Query: 55  TMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANS 114
            MKF YP ALTAL+Y TSA GV+ CG  FK I+HD L   TM RF  AA+I YLSLF NS
Sbjct: 61  VMKFPYPGALTALQYFTSAAGVVICG-WFKIIEHDPLDRSTMWRFLPAAVIFYLSLFTNS 119

Query: 115 EL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
           EL                    +I  + +L QPWP +KTW SL TI GGS+LY++ +
Sbjct: 120 ELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKTWLSLATIFGGSVLYVLTD 176

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547792|ref|XP_002514953.1| GDP-mannose transporter, putative [Ricinus communis] gi|223546004|gb|EEF47507.1| GDP-mannose transporter, putative [Ricinus communis]

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/178 (51%), Positives = 113/178 (63%), Gaps = 28/178 (15%)

Query: 1   MTNDEENPLIG--KINPRIARMM-----TWYNSLGHRASIYGVAAGYCLSASLLAIINKW 53
           M+ D ENP +G  +  P  + +      TWY+ L  + SIYG+AAGYCLSASLL+IINKW
Sbjct: 19  MSGDVENPKVGENQKGPGASSLANDIQATWYSGLLRQTSIYGIAAGYCLSASLLSIINKW 78

Query: 54  ATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFAN 113
           A MKF YP ALTAL+Y TSA GVL CG  FK ++HD L  +TM RF  AAI+ YLSLF N
Sbjct: 79  AVMKFPYPGALTALQYFTSAAGVLACG-WFKLVEHDRLDLLTMWRFLPAAIMFYLSLFTN 137

Query: 114 SEL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
           SEL                    +I  + FLHQPWP +KTW SL TI GGS+LY++ +
Sbjct: 138 SELLLHANVDTFIVFRSVVPIFVAIGETLFLHQPWPALKTWLSLTTIFGGSVLYVLTD 195

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821912|emb|CAN61662.1| hypothetical protein VITISV_022803 [Vitis vinifera]

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/177 (51%), Positives = 112/177 (63%), Gaps = 27/177 (15%)

Query: 1   MTNDEENPLI-----GKINPRIARMM-TWYNSLGHRASIYGVAAGYCLSASLLAIINKWA 54
           M+NDEENP +     G  NP  + +  TWY+    +ASIYG+AAGYC+SASLL+IINKWA
Sbjct: 253 MSNDEENPKVRASQKGPENPSSSEIQATWYSGFLQQASIYGIAAGYCISASLLSIINKWA 312

Query: 55  TMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANS 114
            MKF YP ALTAL+Y TSA GV+ CG  FK I+HD L   TM RF  AA+I YLSLF NS
Sbjct: 313 VMKFPYPGALTALQYFTSAAGVVICG-WFKIIEHDPLDRSTMWRFLPAAVIFYLSLFTNS 371

Query: 115 EL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
           EL                    +I  + +L QPWP +K W SL TI GGS+LY++ +
Sbjct: 372 ELLLHANVDTFIVFRSAVPIFVAIGETLYLKQPWPTMKMWLSLATIFGGSVLYVLTD 428

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107633|ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1| predicted protein [Populus trichocarpa]

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/178 (51%), Positives = 110/178 (61%), Gaps = 28/178 (15%)

Query: 1   MTNDEENPL-------IGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKW 53
           M+ D ENP         G  +P      TWY+ L  + SIYG+AAGYC+SASLL+IINKW
Sbjct: 1   MSADMENPKAEEEQKGTGSASPANETPATWYSGLLKQTSIYGIAAGYCISASLLSIINKW 60

Query: 54  ATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFAN 113
           A MKF YP ALTAL+Y TSA GVL CG C K ++HD L  +TM RF  AAI+ YLSLF N
Sbjct: 61  AIMKFPYPGALTALQYFTSAAGVLVCGWC-KVLEHDSLDLLTMWRFLPAAIMFYLSLFTN 119

Query: 114 SEL--------------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
           SEL                    +I  + FLHQPWP +KTW SL TI GGS+LY++ +
Sbjct: 120 SELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLKTWLSLSTIFGGSVLYVLTD 177

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223013|ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana] gi|75198562|sp|Q9S845.1|GONS3_ARATH RecName: Full=GDP-mannose transporter GONST3; AltName: Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 gi|6554485|gb|AAF16667.1|AC012394_16 unknown protein; 69155-70273 [Arabidopsis thaliana] gi|6573714|gb|AAF17634.1|AC009978_10 T23E18.26 [Arabidopsis thaliana] gi|29329821|emb|CAD83087.1| GONST3 Golgi Nucleotide sugar transporter [Arabidopsis thaliana] gi|332197705|gb|AEE35826.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]

 Score =  163 bits (413), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 108/171 (63%), Gaps = 22/171 (12%)

Query: 2   TNDEENPLIGKI-NPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAY 60
           TNDEEN  + ++ N       TWY+    +AS+YGVAAGYCLSASLL+IINKWA MKF Y
Sbjct: 3   TNDEENGTVIEVKNVPEPSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPY 62

Query: 61  PEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSEL---- 116
           P ALTA++Y TSA GVL C    K I+HD L  +TM RF  AA+I YLSLF NSEL    
Sbjct: 63  PGALTAMQYFTSAAGVLLCAQ-MKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSELLLHA 121

Query: 117 ----------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
                           +I  + FLHQPWP +KTW SL TI GGSLLY+  +
Sbjct: 122 NVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTD 172

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842389|ref|XP_002889076.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297334917|gb|EFH65335.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 106/171 (61%), Gaps = 22/171 (12%)

Query: 2   TNDEEN-PLIGKINPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAY 60
           TNDEEN  LI   N       TWY+    +AS+YGVAAGYCLSASLL+IINKWA MKF Y
Sbjct: 3   TNDEENGTLIEVKNVPEPSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPY 62

Query: 61  PEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSEL---- 116
           P ALTA++Y TSA GV  C    K I+HD L  +TM RF  AA+I YLSLF NSEL    
Sbjct: 63  PGALTAMQYFTSAAGVFLCAQ-MKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSELLLHA 121

Query: 117 ----------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
                           +I  + +LHQPWP +KTW SL TI GGSLLY+  +
Sbjct: 122 NVDTFIVFRSAVPIFVAIGETLYLHQPWPSVKTWGSLATIFGGSLLYVFTD 172

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
TAIR|locus:2014634	372	GONST3 "golgi nucleotide sugar	0.420	0.306	0.603	6.8e-72
TAIR|locus:2147655	341	GONST4 "golgi nucleotide sugar	0.284	0.225	0.487	1.1e-21

TAIR|locus:2014634 GONST3 "golgi nucleotide sugar transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 6.8e-72, Sum P(3) = 6.8e-72
 Identities = 70/116 (60%), Positives = 82/116 (70%)

Query:     2 TNDEENPLIGKI-NPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAY 60
             TNDEEN  + ++ N       TWY+    +AS+YGVAAGYCLSASLL+IINKWA MKF Y
Sbjct:     3 TNDEENGTVIEVKNVPEPSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPY 62

Query:    61 PEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSEL 116
             P ALTA++Y TSA GVL C    K I+HD L  +TM RF  AA+I YLSLF NSEL
Sbjct:    63 PGALTAMQYFTSAAGVLLCAQ-MKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSEL 117

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0015780 "nucleotide-sugar transport" evidence=IGI

TAIR|locus:2147655 GONST4 "golgi nucleotide sugar transporter 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
 Identities = 38/78 (48%), Positives = 49/78 (62%)

Query:    39 GYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRR 98
             GY L +SLLA+INK A   F YP  LTAL+YLT  V V   G     I+HD  T+ T ++
Sbjct:    20 GYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYLLGKS-GLINHDPFTWDTAKK 78

Query:    99 FASAAIIVYLSLFANSEL 116
             F  AAI+ YL++F N+ L
Sbjct:    79 FLPAAIVFYLAIFTNTNL 96

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035195001 SubName- Full=Chromosome chr10 scaffold_76, whole genome shotgun sequence; (396 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	271
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.96
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.8
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.79
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.67
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.55
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.27
KOG1580	337	consensus UDP-galactose transporter related protei	98.4
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.34
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	97.83
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.73
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.56
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.45
KOG1581	327	consensus UDP-galactose transporter related protei	97.38
PLN00411	358	nodulin MtN21 family protein; Provisional	97.3
PRK11689	295	aromatic amino acid exporter; Provisional	97.02
PRK11272	292	putative DMT superfamily transporter inner membran	97.01
KOG1582	367	consensus UDP-galactose transporter related protei	96.38
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	96.35
PRK15430	296	putative chloramphenical resistance permease RarD;	96.34
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.3
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	93.98
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.24
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	92.42
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	86.29
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	83.82
COG2510	140	Predicted membrane protein [Function unknown]	81.77
PRK09541	110	emrE multidrug efflux protein; Reviewed	81.4
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	81.3

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6.9e-41  Score=310.26  Aligned_cols=208  Identities=26%  Similarity=0.404  Sum_probs=185.3

Q ss_pred             hchhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHH--HHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHH
Q 048307           27 LGHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTA--LRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAI  104 (271)
Q Consensus        27 ~~~~~~~~~~v~~Y~~~S~~mv~lNK~vL~~Fp~P~~L~~--~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsl  104 (271)
                      ..++.+...++++||++|++|+++||++++++|+|..++.  .|+++|++++.++++ +|.+++||+|++++|||+|+++
T Consensus         7 ~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~l~~~~~kk~~P~~~   85 (314)
T KOG1444|consen    7 SKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRPLDLRTAKKWFPVSL   85 (314)
T ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCCcChHHHHHHccHHH
Confidence            3456677899999999999999999999976666655555  999999999999988 9999999999999999999999


Q ss_pred             HHHHHHHhhhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHH------------H-----
Q 048307          105 IVYLSLFANSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLL------------Y-----  147 (271)
Q Consensus       105 lFv~~L~tn~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~------------y-----  147 (271)
                      +|++|+++|+++|+                    +|.+|+|.+ |+++++.|+..|++|+.+            |     
T Consensus        86 lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~  164 (314)
T KOG1444|consen   86 LFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALA  164 (314)
T ss_pred             HHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhccccceecchhHHHHHH
Confidence            99999999999998                    898888865 899999999999999874            3     


Q ss_pred             ----HhhhHHHHHHHhcc--C----------------------------------CCCcchhHHHHHHHHHHHH------
Q 048307          148 ----IMGEMSKLKHEITN--K----------------------------------SDWYSFEVILPLGFSCFFG------  181 (271)
Q Consensus       148 ----~~~~~~y~K~~l~~--~----------------------------------~~w~~~~~~~~l~~S~v~G------  181 (271)
                          .+.+++|+||.++.  .                                  ++|.++.++..+.+||++|      
T Consensus       165 n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~  244 (314)
T KOG1444|consen  165 NCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYT  244 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHH
Confidence                46888999998753  1                                  2355678889999999999      


Q ss_pred             -----------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccCCCCCCC
Q 048307          182 -----------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVN  237 (271)
Q Consensus       182 -----------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~~~~~~~  237 (271)
                                 |+|++| ++||++++++++++||+|+++.|++|++++++||+.|+|++.|+++.++
T Consensus       245 s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  245 SFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence                       899999 9999999999999999999999999999999999999999976655444

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.96  E-value=9.1e-29  Score=220.80  Aligned_cols=191  Identities=18%  Similarity=0.357  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHh--hcCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHHHHHHH
Q 048307           34 YGVAAGYCLSASLLAIINKWAT--MKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLF  111 (271)
Q Consensus        34 ~~~v~~Y~~~S~~mv~lNK~vL--~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllFv~~L~  111 (271)
                      ..+++.||.+|+.|++.|||++  .+|++...+++.|.++|++.+.+++. +|.++++   .+.+|+|+|++++.+.|||
T Consensus         8 ~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~fR---~t~aK~WfpiSfLLv~MIy   83 (309)
T COG5070           8 LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEFR---LTKAKKWFPISFLLVVMIY   83 (309)
T ss_pred             chHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhee---hhhhhhhcCHHHHHHHHHH
Confidence            3678999999999999999999  48999999999999999999999877 8877655   7899999999999999999


Q ss_pred             hhhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHH-------------------H-----
Q 048307          112 ANSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLL-------------------Y-----  147 (271)
Q Consensus       112 tn~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~-------------------y-----  147 (271)
                      +++|+|+                    +|.+++|.+. +.....|+.+|+++++.                   |     
T Consensus        84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~v-tsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~  162 (309)
T COG5070          84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRV-TSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFT  162 (309)
T ss_pred             hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCcc-chhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEeh
Confidence            9999998                    8888899886 66779999999998762                   3     


Q ss_pred             ----HhhhHHHHHHHhc--c------------------------CCCCcc--------hhHHHHHHHHHHHH--------
Q 048307          148 ----IMGEMSKLKHEIT--N------------------------KSDWYS--------FEVILPLGFSCFFG--------  181 (271)
Q Consensus       148 ----~~~~~~y~K~~l~--~------------------------~~~w~~--------~~~~~~l~~S~v~G--------  181 (271)
                          .++...-+|+.++  +                        +++|.+        ...+.++.+||++.        
T Consensus       163 NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~sa  242 (309)
T COG5070         163 NCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSA  242 (309)
T ss_pred             hhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccc
Confidence                2355556666542  1                        367863        33455889999888        


Q ss_pred             ---------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeeccc
Q 048307          182 ---------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPT  230 (271)
Q Consensus       182 ---------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~  230 (271)
                               |++++| .+||.|.++.|.++||.|.+...++++++|.++|.+|+++|-
T Consensus       243 WcvrVtSSTtySMvG-ALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks  299 (309)
T COG5070         243 WCVRVTSSTTYSMVG-ALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS  299 (309)
T ss_pred             eeEeehhhhHHHHHH-HhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence                     999999 999999999999999999999999999999999999999994

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=6.4e-28  Score=220.35  Aligned_cols=210  Identities=15%  Similarity=0.174  Sum_probs=177.3

Q ss_pred             hchhhhHHHHHHHHHHHHHHHHHHHHHHh----hcCCchHHHHHHHHHHHHHHHHhccccc----cceec--CCCChhHH
Q 048307           27 LGHRASIYGVAAGYCLSASLLAIINKWAT----MKFAYPEALTALRYLTSAVGVLPCGSCF----KFIDH--DLLTFVTM   96 (271)
Q Consensus        27 ~~~~~~~~~~v~~Y~~~S~~mv~lNK~vL----~~Fp~P~~L~~~Q~~vt~~il~vl~~~~----g~v~~--~~~~~~~~   96 (271)
                      ..++-.+..++..|+.+||.++|+||+++    ..++.|.|++++||+++..+|.++++..    +..++  -++|.+++
T Consensus        23 ~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~  102 (347)
T KOG1442|consen   23 EANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATA  102 (347)
T ss_pred             HHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHH
Confidence            44566788999999999999999999998    3699999999999999999999976622    22233  34677799


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHH----------
Q 048307           97 RRFASAAIIVYLSLFANSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLL----------  146 (271)
Q Consensus        97 ~k~lPlsllFv~~L~tn~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~----------  146 (271)
                      |+++|++++|++||.+|+.||+                    +.|+++||+ ++....+||++|++|+..          
T Consensus       103 r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqk-Ts~~~~~~C~lIi~GF~lGvdqE~~~~~  181 (347)
T KOG1442|consen  103 RQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQK-TSFFALGCCLLIILGFGLGVDQEGSTGT  181 (347)
T ss_pred             HhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccc-cccccceeehhheehheeccccccccCc
Confidence            9999999999999999999999                    789999998 599999999999999751          


Q ss_pred             -------H-------HhhhHHHHHHHhccC--CCC---------------------------------cchhHHHHHHHH
Q 048307          147 -------Y-------IMGEMSKLKHEITNK--SDW---------------------------------YSFEVILPLGFS  177 (271)
Q Consensus       147 -------y-------~~~~~~y~K~~l~~~--~~w---------------------------------~~~~~~~~l~~S  177 (271)
                             +       ++.+.+|+|+.++..  ..|                                 ....||..|++|
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence                   1       568889999876431  112                                 146789999999


Q ss_pred             HHHH-----------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccCCCCCCCc
Q 048307          178 CFFG-----------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVNE  238 (271)
Q Consensus       178 ~v~G-----------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~~~~~~~~  238 (271)
                      |++|                 ||++.| +++.+.++++++.++++..+..||-|..+.++|+.+|+++|-+..++..+
T Consensus       262 glfgF~mgyvTg~QIK~TSplThnISg-TAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~  338 (347)
T KOG1442|consen  262 GLFGFAMGYVTGWQIKVTSPLTHNISG-TAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA  338 (347)
T ss_pred             HHHHHHhhheeeEEEEecccceeeecH-hHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence            9999                 999999 99999999999999999999999999999999999999999543333333

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.80  E-value=7.1e-18  Score=159.78  Aligned_cols=198  Identities=18%  Similarity=0.189  Sum_probs=152.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHhccccccceecCCCC--hhHHHHHHHHHHHH
Q 048307           29 HRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLT--FVTMRRFASAAIIV  106 (271)
Q Consensus        29 ~~~~~~~~v~~Y~~~S~~mv~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~--~~~~~k~lPlsllF  106 (271)
                      ...++...++.|..+|+..++.||+++..+|+|..++++|++++.+++.++.. ++..+.++++  ++..++.+|+++++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            46778889999999999999999999999999999999999999877766543 5555556664  34789999999998


Q ss_pred             HHHHHhhhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHHH-------------------
Q 048307          107 YLSLFANSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLLY-------------------  147 (271)
Q Consensus       107 v~~L~tn~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~y-------------------  147 (271)
                      .+...+...+++                    ..++++|++ ++++.++++.++++|+...                   
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek-~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~  203 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQF-LNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN  203 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHH
Confidence            765443334444                    667788887 7999999999999998621                   


Q ss_pred             --HhhhHHHHHHHhccCC----CCc----------------------------------------c---hhHHHHHHHHH
Q 048307          148 --IMGEMSKLKHEITNKS----DWY----------------------------------------S---FEVILPLGFSC  178 (271)
Q Consensus       148 --~~~~~~y~K~~l~~~~----~w~----------------------------------------~---~~~~~~l~~S~  178 (271)
                        .+.+.++.|+.+++.+    ++.                                        +   ..++..++++|
T Consensus       204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~  283 (350)
T PTZ00343        204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG  283 (350)
T ss_pred             HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence              3466677887664211    000                                        0   01111233444


Q ss_pred             HHH-----------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          179 FFG-----------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       179 v~G-----------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      +..                 |+++.| .++.++++++++++|+++.|+.+++|..+.++|.++|++.|
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~-~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVAN-TLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHH-HHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            443                 889999 99999999999999999999999999999999999999875

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.79  E-value=4.1e-18  Score=156.72  Aligned_cols=199  Identities=18%  Similarity=0.186  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHHHHHHHh
Q 048307           33 IYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFA  112 (271)
Q Consensus        33 ~~~~v~~Y~~~S~~mv~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllFv~~L~t  112 (271)
                      ..+.++.|.++|++++++||+++..|++|.++++.|++++++++.++.+ .+..+.+++++++.++++|+++++.+....
T Consensus         3 ~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817         3 TGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4577899999999999999999988999999999999999888887633 455567788999999999999999888877


Q ss_pred             hhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHHH---------------------Hhhh
Q 048307          113 NSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLLY---------------------IMGE  151 (271)
Q Consensus       113 n~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~y---------------------~~~~  151 (271)
                      ++.+|+                    .+++++||+ ++++.+++++++++|+...                     .+.+
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~-~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQE-FPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence            777776                    778888886 7999999999999997521                     2456


Q ss_pred             HHHHHHHhc--cCCCCc-------------------------------------ch-hHHH-HHHHHH--H--------H
Q 048307          152 MSKLKHEIT--NKSDWY-------------------------------------SF-EVIL-PLGFSC--F--------F  180 (271)
Q Consensus       152 ~~y~K~~l~--~~~~w~-------------------------------------~~-~~~~-~l~~S~--v--------~  180 (271)
                      .++.||..+  +.+.+.                                     .. ..+. .+..++  .        .
T Consensus       161 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (302)
T TIGR00817       161 NIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM  240 (302)
T ss_pred             HHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678888665  322211                                     00 0111 111111  1        0


Q ss_pred             H-------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccCCCC
Q 048307          181 G-------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPR  234 (271)
Q Consensus       181 G-------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~~~~  234 (271)
                      +       |+++.| .++.+.+++.+++++|++.|+.+++|..+.+.|..+|++.|.+|++
T Consensus       241 ~l~~~sa~t~sv~~-~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       241 LLGRVSPLTHSVGN-CMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHccCCchHHHHHh-hhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence            1       889999 9999999999999999999999999999999999999999855444

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.67  E-value=4.2e-18  Score=159.98  Aligned_cols=202  Identities=18%  Similarity=0.230  Sum_probs=160.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHhccccccceecCCCChh-HHHHHHHHHHH
Q 048307           29 HRASIYGVAAGYCLSASLLAIINKWATM--KFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFV-TMRRFASAAII  105 (271)
Q Consensus        29 ~~~~~~~~v~~Y~~~S~~mv~lNK~vL~--~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~-~~~k~lPlsll  105 (271)
                      +..+.+.+...|.++|+..++.||+++.  +||+|.+++..|..++++...++.. +|..+.++.+.+ ..++.+|++++
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~~~~~~~~~~~~~~llpl~~~   92 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKV-LKLVPPSKISSKLPLRTLLPLGLV   92 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCCCccccccchHHHHHHHHH
Confidence            4556778899999999999999999996  9999999999999999888888655 999988887665 79999999999


Q ss_pred             HHHHHHhhhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHH------------H------
Q 048307          106 VYLSLFANSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLL------------Y------  147 (271)
Q Consensus       106 Fv~~L~tn~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~------------y------  147 (271)
                      |.+++.+++-+|+                    .++++.+++ .++++++++..+++|+..            +      
T Consensus        93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~-~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s  171 (316)
T KOG1441|consen   93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKT-YSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMIS  171 (316)
T ss_pred             HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCC-CcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHH
Confidence            9999987777766                    666666665 799999999999999641            1      


Q ss_pred             ---HhhhHHHHHHHhcc----C------------------CCCc----------------chhHHHHHHHHHHHH-----
Q 048307          148 ---IMGEMSKLKHEITN----K------------------SDWY----------------SFEVILPLGFSCFFG-----  181 (271)
Q Consensus       148 ---~~~~~~y~K~~l~~----~------------------~~w~----------------~~~~~~~l~~S~v~G-----  181 (271)
                         .+.+.++.|+++..    .                  .+|.                +..++..++.| +++     
T Consensus       172 ~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nl  250 (316)
T KOG1441|consen  172 NLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNL  250 (316)
T ss_pred             HHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHH
Confidence               34556677776521    0                  0221                11122222333 444     


Q ss_pred             ------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccCCCC
Q 048307          182 ------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPR  234 (271)
Q Consensus       182 ------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~~~~  234 (271)
                                  ||+|.| ..|.++.++.++++|+++.|+.|.+|+.++++|-.+|+++|.++++
T Consensus       251 s~f~~ig~tSalT~~V~g-~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  251 SAFLVIGRTSALTYSVAG-HMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHcccCchhhhhhc-cceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence                        999999 9999999999999999999999999999999999999999965443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.55  E-value=2.1e-13  Score=126.33  Aligned_cols=191  Identities=17%  Similarity=0.184  Sum_probs=143.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHHHHHHHhh
Q 048307           36 VAAGYCLSASLLAIINKWATM--KFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFAN  113 (271)
Q Consensus        36 ~v~~Y~~~S~~mv~lNK~vL~--~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllFv~~L~tn  113 (271)
                      .+..|+.|....++.+|..-.  ..++|.++++.|++++++...+.....+   .++.++...++++|+++++.++...+
T Consensus         5 ~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen    5 VAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHHHHHHHHH
Confidence            456677777777777776653  3357999999999999988887544222   45666778999999999999999988


Q ss_pred             hhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHHH--------------------------
Q 048307          114 SELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLLY--------------------------  147 (271)
Q Consensus       114 ~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~y--------------------------  147 (271)
                      +.+|+                    .+++++||+ .+++.+++++++++|...+                          
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~-y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~  160 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKR-YSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLL  160 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHH
Confidence            88887                    788889998 5888899999999997632                          


Q ss_pred             -----HhhhHHHHHHHhcc--CCCC--------------------------c--------chhHHHHHHHHHHHH-----
Q 048307          148 -----IMGEMSKLKHEITN--KSDW--------------------------Y--------SFEVILPLGFSCFFG-----  181 (271)
Q Consensus       148 -----~~~~~~y~K~~l~~--~~~w--------------------------~--------~~~~~~~l~~S~v~G-----  181 (271)
                           -+....+-+|..++  .+.|                          .        .+..+..+++.+++|     
T Consensus       161 ~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~  240 (303)
T PF08449_consen  161 LSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQF  240 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence                 11223444554421  1111                          1        122333344444444     


Q ss_pred             ------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccC
Q 048307          182 ------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTN  231 (271)
Q Consensus       182 ------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~  231 (271)
                                  |.++++ +++|.++.++++++|+++.|+.+|+|+.+.+.|..+|++.+.+
T Consensus       241 ~i~~~~~~~~al~~t~v~-t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  241 FIFYLIKKFSALTTTIVT-TLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHHhcCchhhhhHH-HHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence                        789999 9999999999999999999999999999999999999999943

; GO: 0055085 transmembrane transport

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.27  E-value=4.6e-11  Score=111.41  Aligned_cols=201  Identities=16%  Similarity=0.213  Sum_probs=142.1

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHhcccccccee---cCCCChh-HHHHHHHHH
Q 048307           28 GHRASIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFID---HDLLTFV-TMRRFASAA  103 (271)
Q Consensus        28 ~~~~~~~~~v~~Y~~~S~~mv~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~---~~~~~~~-~~~k~lPls  103 (271)
                      ++...+.+.++.|-++|+++.+.||+.-.+|++|.+++.+|+++-........+....-.   ..+++|+ ..|+..|.+
T Consensus        12 ~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta   91 (349)
T KOG1443|consen   12 MNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA   91 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh
Confidence            455666677799999999999999999999999999999999876666555433121111   3588988 689999999


Q ss_pred             HHHHHHHHhhhhhhh-------------------heeeeecccCCchHHHHHHHHHHHHHHH------------H-----
Q 048307          104 IIVYLSLFANSELSI-------------------AVSPFLHQPWPLIKTWFSLLTILGGSLL------------Y-----  147 (271)
Q Consensus       104 llFv~~L~tn~~~L~-------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~------------y-----  147 (271)
                      +.=.+-|.-++.+|+                   .--+++|-+.+++.-.+.+++|..|.+.            .     
T Consensus        92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~  171 (349)
T KOG1443|consen   92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLA  171 (349)
T ss_pred             hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHH
Confidence            998888877777766                   1112356555788777777777777641            1     


Q ss_pred             ---Hh-hhHHHHHHHhccC--------------CCCc--------------------c-------hhHHH---HHHHHHH
Q 048307          148 ---IM-GEMSKLKHEITNK--------------SDWY--------------------S-------FEVIL---PLGFSCF  179 (271)
Q Consensus       148 ---~~-~~~~y~K~~l~~~--------------~~w~--------------------~-------~~~~~---~l~~S~v  179 (271)
                         ++ ..-.+.+.++.+.              ++|.                    +       ...+-   .+.+.|+
T Consensus       172 aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~  251 (349)
T KOG1443|consen  172 ASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGL  251 (349)
T ss_pred             HHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHH
Confidence               11 2234666655432              1221                    0       00110   1111122


Q ss_pred             HH-----------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          180 FG-----------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       180 ~G-----------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      .+                 |.|+.| +.|.+++.+.+.++-+++.|..||.|..+|+.|-..|.+.|
T Consensus       252 laF~l~~sEflLl~~Ts~ltlSIaG-I~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~  317 (349)
T KOG1443|consen  252 LAFLLEFSEFLLLSRTSSLTLSIAG-IVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEP  317 (349)
T ss_pred             HHHHHHHHHHheeeeccceeeeHHH-HHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCc
Confidence            22                 889999 99999999999999999999999999999999999996654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.40  E-value=5.3e-06  Score=75.89  Aligned_cols=161  Identities=15%  Similarity=0.218  Sum_probs=109.7

Q ss_pred             cCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHHHHHHHhhhhhhh------------------
Q 048307           57 KFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSELSI------------------  118 (271)
Q Consensus        57 ~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllFv~~L~tn~~~L~------------------  118 (271)
                      +|.+...+.++||++-.+...++-.   .-+-.+.|..-.+...--++-|.+...+++.+|+                  
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~---ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV  125 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFL---IRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV  125 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhhee---ecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence            5999999999999998888877533   1123455556667778888999987777777777                  


Q ss_pred             --heeeeecccCCchHHHHHHHHHHHHHHH--H-----------H--hhh----------------HHHHHHHhc-----
Q 048307          119 --AVSPFLHQPWPLIKTWFSLLTILGGSLL--Y-----------I--MGE----------------MSKLKHEIT-----  160 (271)
Q Consensus       119 --~~~~~lg~~~ps~~v~ls~~liv~Ga~~--y-----------~--~~~----------------~~y~K~~l~-----  160 (271)
                        +..++.+++ -+|+.+.|+++|+.|+..  |           .  -++                ...+|...+     
T Consensus       126 MilGVl~~~Ks-Y~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~  204 (337)
T KOG1580|consen  126 MILGVLFAHKS-YHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTS  204 (337)
T ss_pred             eeeehhhhccc-ccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchh
Confidence              556666666 499999999999999863  3           0  011                122222111     


Q ss_pred             ---cCCCC----------------cc-------hhHH---HHHHHHHHHH--------------HHhhhhHHHHHHHHHH
Q 048307          161 ---NKSDW----------------YS-------FEVI---LPLGFSCFFG--------------GFTVLGGAVNKSLNVV  197 (271)
Q Consensus       161 ---~~~~w----------------~~-------~~~~---~~l~~S~v~G--------------T~svvG~~lnk~~~~v  197 (271)
                         ..+-|                +-       +..+   ..+.+.+.+|              |-|++- +..|+.+++
T Consensus       205 MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivT-TTRKfFTil  283 (337)
T KOG1580|consen  205 MMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVT-TTRKFFTIL  283 (337)
T ss_pred             hHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEe-ehHHHHHHH
Confidence               01223                21       1111   1233333444              557787 889999999


Q ss_pred             HHHHhcCcccchhhHHHHHHHHhhh
Q 048307          198 INLAFWDKHSTRVGTLGLLICMLGG  222 (271)
Q Consensus       198 ~~v~~fd~~~S~~~~~gi~i~l~gg  222 (271)
                      +++++|++|.+..+|+|-.+.+.|-
T Consensus       284 ~SVllf~npls~rQwlgtvlVF~aL  308 (337)
T KOG1580|consen  284 ISVLLFNNPLSGRQWLGTVLVFSAL  308 (337)
T ss_pred             HHHHHhcCcCcHHHHHHHHHHHHHh
Confidence            9999999999999999988776553

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.34  E-value=1.3e-06  Score=71.96  Aligned_cols=45  Identities=22%  Similarity=0.582  Sum_probs=44.2

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheee
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQ  227 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~  227 (271)
                      |++++| .+|.++++++++++|+++.|+.++.|+.++++|+++|+|
T Consensus       109 t~~v~~-~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen  109 TYSVLG-NVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHH-HHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            999999 999999999999999999999999999999999999997

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=97.83  E-value=2.1e-05  Score=73.25  Aligned_cols=189  Identities=14%  Similarity=0.148  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHhc-cccccceecCCCChhH-HHHHHHHHHHHHHHHH
Q 048307           35 GVAAGYCLSASLLAIINKWATMKFA-YPEALTALRYLTSAVGVLPC-GSCFKFIDHDLLTFVT-MRRFASAAIIVYLSLF  111 (271)
Q Consensus        35 ~~v~~Y~~~S~~mv~lNK~vL~~Fp-~P~~L~~~Q~~vt~~il~vl-~~~~g~v~~~~~~~~~-~~k~lPlsllFv~~L~  111 (271)
                      .+.++-++||....+ - ++..+.| +-+.+++.|.++.++-=.+. ++ ++     ....++ .|.++-+-.+|...=.
T Consensus         8 i~~vf~GCcsnvv~l-E-~L~~~~pgsgNLITFaqFlFia~eGlif~sk-f~-----~~k~kiplk~Y~i~V~mFF~vnv   79 (330)
T KOG1583|consen    8 ISLVFGGCCSNVVFL-E-LLVRNEPGSGNLITFAQFLFIATEGLIFTSK-FF-----TVKPKIPLKDYAITVAMFFIVNV   79 (330)
T ss_pred             HHHHHHhhhchHHHH-H-HHHHhCCCCeeehHHHHHHHHHHhceeeecc-cc-----ccCCCCchhhhheehheeeeeee
Confidence            444556666654433 2 2445555 56889999987644322221 22 22     222333 3445544444444334


Q ss_pred             hhhhhhh---------------------heeeeecccCCchHHHHHHHHHHHHHHHH-----------------------
Q 048307          112 ANSELSI---------------------AVSPFLHQPWPLIKTWFSLLTILGGSLLY-----------------------  147 (271)
Q Consensus       112 tn~~~L~---------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~y-----------------------  147 (271)
                      +|+.+|+                     ..++++|+++ |.+-+.|++++..|.+..                       
T Consensus        80 ~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Y-s~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~  158 (330)
T KOG1583|consen   80 TNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRY-SLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD  158 (330)
T ss_pred             eccceeeecccceEEEEEecCcHHHHHHHHHHhcccee-ehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc
Confidence            7778777                     5677899986 999999999999997632                       


Q ss_pred             ----------------HhhhH------H---HHHHHhcc-------------------CCCCc----------------c
Q 048307          148 ----------------IMGEM------S---KLKHEITN-------------------KSDWY----------------S  167 (271)
Q Consensus       148 ----------------~~~~~------~---y~K~~l~~-------------------~~~w~----------------~  167 (271)
                                      .++++      .   |.||--+.                   .++|.                -
T Consensus       159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~v  238 (330)
T KOG1583|consen  159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKV  238 (330)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccc
Confidence                            11221      1   11111000                   01221                1


Q ss_pred             hhHHHHHHHHHHHH-----------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeeccc
Q 048307          168 FEVILPLGFSCFFG-----------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPT  230 (271)
Q Consensus       168 ~~~~~~l~~S~v~G-----------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~  230 (271)
                      |..|..++.+|+.-                 |.|++= .+.|.+.-+++++.|++|+|+..|+|-.+.++|.++|+... 
T Consensus       239 P~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvl-tlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~-  316 (330)
T KOG1583|consen  239 PSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVL-TLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW-  316 (330)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEee-eHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH-
Confidence            55566666665543                 667787 89999999999999999999999999999999999999888 


Q ss_pred             CCCC
Q 048307          231 NKPR  234 (271)
Q Consensus       231 ~~~~  234 (271)
                      ++||
T Consensus       317 ~~~~  320 (330)
T KOG1583|consen  317 NHPK  320 (330)
T ss_pred             cCcc
Confidence            5666

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.73  E-value=0.0041  Score=59.51  Aligned_cols=64  Identities=16%  Similarity=0.252  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccCCCCCCCccchhhcchhhhhhccc
Q 048307          191 NKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVNETEVQETWSDKARAGGQ  254 (271)
Q Consensus       191 nk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~~~~~~~~~~~~~~~~~~~~~~~~  254 (271)
                      -+.-..++++++|++++++.-++|..+.++|-++|+..+.+..+...++.+++.++++++++.+
T Consensus       269 sd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (334)
T PF06027_consen  269 SDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEARRNERKQELEEGQDEDGPD  332 (334)
T ss_pred             hhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccchhhccccccccccccccc
Confidence            3566678899999999999999999999999999998885444444444444444455544443

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.56  E-value=0.0095  Score=52.95  Aligned_cols=166  Identities=8%  Similarity=-0.037  Sum_probs=105.4

Q ss_pred             HHHHHHHhhcCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHH-HHHHHhhhhhhh--------
Q 048307           48 AIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIV-YLSLFANSELSI--------  118 (271)
Q Consensus        48 v~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllF-v~~L~tn~~~L~--------  118 (271)
                      -+..|+.+.+..-|..+.+.+++.+.+++....+ .+      .+++..++.+..+.+. .+....-..+++        
T Consensus         5 ~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~-~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         5 GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLR-RR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH-hc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            3568888877777899999999988877766433 22      2334444555554432 222111112222        


Q ss_pred             ------------heeeeecccCCchHHHHHHHHHHHHHHHH----------------------HhhhHHHHHHHhccCC-
Q 048307          119 ------------AVSPFLHQPWPLIKTWFSLLTILGGSLLY----------------------IMGEMSKLKHEITNKS-  163 (271)
Q Consensus       119 ------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~y----------------------~~~~~~y~K~~l~~~~-  163 (271)
                                  ...+++||+ ++++.+.++.+.+.|....                      .+.+..+.|+..++.+ 
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~-~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~  156 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKER-PRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP  156 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence                        667778876 7999999999988886521                      2344566666543211 


Q ss_pred             -------------------------CCc--chhHHHHHHHHHHHH------------------HHhhhhHHHHHHHHHHH
Q 048307          164 -------------------------DWY--SFEVILPLGFSCFFG------------------GFTVLGGAVNKSLNVVI  198 (271)
Q Consensus       164 -------------------------~w~--~~~~~~~l~~S~v~G------------------T~svvG~~lnk~~~~v~  198 (271)
                                               +..  +...+..+...|+++                  +.++.. ...-+..+++
T Consensus       157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~ll  235 (260)
T TIGR00950       157 ELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA-LAEPLVALLL  235 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHHHHHHH
Confidence                                     000  122332333333333                  556667 7788999999


Q ss_pred             HHHhcCcccchhhHHHHHHHHhhh
Q 048307          199 NLAFWDKHSTRVGTLGLLICMLGG  222 (271)
Q Consensus       199 ~v~~fd~~~S~~~~~gi~i~l~gg  222 (271)
                      +++++|++.++..++|..+.+.|.
T Consensus       236 ~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       236 GLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999988774

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.45  E-value=0.022  Score=52.56  Aligned_cols=47  Identities=17%  Similarity=0.155  Sum_probs=40.2

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      ..++.. .+.-+..++.+++++|++.++..++|..+.+.|.+++....
T Consensus       237 ~as~~~-~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        237 TFGTLM-SMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHH-HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            445566 67778889999999999999999999999999999997554

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.38  E-value=0.0026  Score=60.00  Aligned_cols=188  Identities=12%  Similarity=0.107  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHHHHh-------------hcCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHH
Q 048307           37 AAGYCLSASLLAIINKWAT-------------MKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAA  103 (271)
Q Consensus        37 v~~Y~~~S~~mv~lNK~vL-------------~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPls  103 (271)
                      -+++|++.|-..++-=-++             .+|..|.|+.++|-+++.++-+..-+   ..+.+....+-..+.--++
T Consensus        14 ~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~---~~k~~~~~~apl~~y~~is   90 (327)
T KOG1581|consen   14 LLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK---WWKKELSGVAPLYKYSLIS   90 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh---cccccCCCCCchhHHhHHH
Confidence            3556777666666655555             15889999999999999988877533   3333333333344444444


Q ss_pred             HHHHHHHHhhhhhhh--------------------heeeeecccCCchHHHHHHHHHHHHHHHH----------------
Q 048307          104 IIVYLSLFANSELSI--------------------AVSPFLHQPWPLIKTWFSLLTILGGSLLY----------------  147 (271)
Q Consensus       104 llFv~~L~tn~~~L~--------------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~y----------------  147 (271)
                      +.=...=+.+.++|+                    -..++.|++. +..-+++.++|.+|+-.+                
T Consensus        91 ~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky-~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n  169 (327)
T KOG1581|consen   91 FTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKY-SSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN  169 (327)
T ss_pred             HHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCcc-CcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence            333333334455555                    3345567875 777788999999986421                


Q ss_pred             -------HhhhHH---HH----HHHhcc--C------------------------CCCc--------chhHHHHHHHHHH
Q 048307          148 -------IMGEMS---KL----KHEITN--K------------------------SDWY--------SFEVILPLGFSCF  179 (271)
Q Consensus       148 -------~~~~~~---y~----K~~l~~--~------------------------~~w~--------~~~~~~~l~~S~v  179 (271)
                             +.++..   ++    .++.+.  +                        .+|.        .+.++.-+++=|.
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence                   111110   00    001000  0                        1221        1444433333344


Q ss_pred             HH-----------------HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          180 FG-----------------GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       180 ~G-----------------T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      +|                 |++.+= +..|++.++++.+.|+.+.++.+|+|+.+.+.|=.+=.+-|
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~-ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k  315 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIM-TTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLK  315 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHH-HHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHH
Confidence            44                 777777 88999999999999999999999999988776544433555

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.30  E-value=0.033  Score=53.55  Aligned_cols=45  Identities=13%  Similarity=0.138  Sum_probs=36.9

Q ss_pred             hhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          184 TVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       184 svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      ++.- .+.-+..+++++++.+++.++..++|..+.+.|-.+-+..+
T Consensus       286 s~~~-~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        286 AIFK-PLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHH-hHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            3344 56667888999999999999999999999999988866544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.02  E-value=0.11  Score=48.01  Aligned_cols=47  Identities=6%  Similarity=-0.019  Sum_probs=37.8

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      ..++.. ..+-+..++.+++++||+.|+..++|..+.+.|.++-...+
T Consensus       243 ~~s~~~-~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        243 LLATAS-YFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHH-HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            345555 66778889999999999999999999999999876654433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.01  E-value=0.18  Score=46.43  Aligned_cols=191  Identities=14%  Similarity=0.109  Sum_probs=111.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHHH--HH
Q 048307           32 SIYGVAAGYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVY--LS  109 (271)
Q Consensus        32 ~~~~~v~~Y~~~S~~mv~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllFv--~~  109 (271)
                      .+...++.+.+-++.- +.=|+.+.+.| |..+++..++.+.+++.+... .+.  ....+++..+..+.++++..  .+
T Consensus         9 ~~~~~~~~~~iWg~~~-~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~-~~~--~~~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272          9 LFGALFALYIIWGSTY-LVIRIGVESWP-PLMMAGVRFLIAGILLLAFLL-LRG--HPLPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHHhhHH-HHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHH-HhC--CCCCcHHHHHHHHHHHHHHHHHHH
Confidence            3444445555555433 34466666554 888999999988777655433 221  11234555555566665431  11


Q ss_pred             HH--hhh-hh--------hh---------heeeeecccCCchHHHHHHHHHHHHHHH-------------H---------
Q 048307          110 LF--ANS-EL--------SI---------AVSPFLHQPWPLIKTWFSLLTILGGSLL-------------Y---------  147 (271)
Q Consensus       110 L~--tn~-~~--------L~---------~~~~~lg~~~ps~~v~ls~~liv~Ga~~-------------y---------  147 (271)
                      .+  ... +.        +.         ..++ +||+ ++++.++++.+-+.|...             .         
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~  161 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASAS  161 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHH
Confidence            11  111 10        11         3344 5775 899999998888888641             1         


Q ss_pred             HhhhHHHHHHHhcc-----------------------C-CCC---cchhHHHHHHHHHHHH------------------H
Q 048307          148 IMGEMSKLKHEITN-----------------------K-SDW---YSFEVILPLGFSCFFG------------------G  182 (271)
Q Consensus       148 ~~~~~~y~K~~l~~-----------------------~-~~w---~~~~~~~~l~~S~v~G------------------T  182 (271)
                      .+.+..+.||....                       . +++   .+...|..+..-++++                  +
T Consensus       162 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~  241 (292)
T PRK11272        162 WAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPAL  241 (292)
T ss_pred             HHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence            23445566664211                       0 112   1233343333333333                  3


Q ss_pred             HhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeeccc
Q 048307          183 FTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPT  230 (271)
Q Consensus       183 ~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~  230 (271)
                      .++.. ...-....+.+.++++|+.|+..++|..+.+.|.++.+..+.
T Consensus       242 ~s~~~-~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        242 ATSYA-YVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHH-HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            45555 677788889999999999999999999999999988876553

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.38  E-value=0.37  Score=45.46  Aligned_cols=47  Identities=15%  Similarity=0.138  Sum_probs=38.5

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      +...+- ++.|.+|+++++++|.+|+|..-..|.++.++|=.+=-|+|
T Consensus       288 ~aatvT-TaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  288 IAATVT-TARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHH-HhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            333444 78899999999999999999998888888888877766666

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=96.35  E-value=0.011  Score=45.71  Aligned_cols=99  Identities=15%  Similarity=0.116  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHhccccccceecCCCChhHHHHHHHHHHHH-HHHHHhhhhhhh-----
Q 048307           45 SLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIV-YLSLFANSELSI-----  118 (271)
Q Consensus        45 ~~mv~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~~~~~~~~~~~k~lPlsllF-v~~L~tn~~~L~-----  118 (271)
                      ....+.+|....++| |...+++++..+.+ +.++....+..+.++.+.+.....+.++++. ......-..+++     
T Consensus         4 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~   81 (126)
T PF00892_consen    4 AIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS   81 (126)
T ss_pred             eeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence            345678898888876 67788888888775 3332221332224666666666666666652 222222222222     


Q ss_pred             ---------------heeeeecccCCchHHHHHHHHHHHHHHH
Q 048307          119 ---------------AVSPFLHQPWPLIKTWFSLLTILGGSLL  146 (271)
Q Consensus       119 ---------------~~~~~lg~~~ps~~v~ls~~liv~Ga~~  146 (271)
                                     .+++++|++ |+.+.+.++.+++.|.+.
T Consensus        82 ~~~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l  123 (126)
T PF00892_consen   82 IVSILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVL  123 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHH
Confidence                           777888886 899999999999999763

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.34  E-value=0.4  Score=44.18  Aligned_cols=44  Identities=5%  Similarity=0.155  Sum_probs=34.7

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhhee
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQ  226 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs  226 (271)
                      +.+... -+.-+..++.+.+++||+.|+..++|..+.+.|..+..
T Consensus       241 ~~s~~~-~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        241 TLGFFQ-YIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            334455 66677788899999999999999999988877766654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.30  E-value=0.89  Score=41.91  Aligned_cols=45  Identities=16%  Similarity=0.110  Sum_probs=35.0

Q ss_pred             hhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          184 TVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       184 svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      ++.. .+.-+..++.+++++|++.++..++|..+.+.|..+=.+.+
T Consensus       245 s~~~-~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        245 APLS-LLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHH-HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            4444 55557778889999999999999999998888777644444

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=93.98  E-value=1.1  Score=43.13  Aligned_cols=43  Identities=28%  Similarity=0.328  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccCC
Q 048307          190 VNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNK  232 (271)
Q Consensus       190 lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~~  232 (271)
                      +-.+++.+.++.+||-+.|..=++|..+++.+-.+|+..|.+.
T Consensus       285 ~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  285 VAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            3356778889999999999999999999999999999777543

>TIGR00803 nst UDP-galactose transporter

Probab=93.24  E-value=0.17  Score=44.56  Aligned_cols=43  Identities=16%  Similarity=0.285  Sum_probs=40.8

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhhe
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTY  225 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lY  225 (271)
                      +.+++. ..+|++++++++++||++.|+..++|..+.+.|..+|
T Consensus       180 ~~~~~~-~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       180 TKSFVT-ALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            778888 9999999999999999999999999999999998887

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=92.42  E-value=8.4  Score=35.05  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhh
Q 048307          191 NKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVT  224 (271)
Q Consensus       191 nk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~l  224 (271)
                      .-+...+.++++++|+.++..++|..+.++|..+
T Consensus       247 ~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       247 SIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            3477788899999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=86.29  E-value=9.4  Score=34.77  Aligned_cols=26  Identities=15%  Similarity=0.419  Sum_probs=22.3

Q ss_pred             heeeeecccCCchHHHHHHHHHHHHHH
Q 048307          119 AVSPFLHQPWPLIKTWFSLLTILGGSL  145 (271)
Q Consensus       119 ~~~~~lg~~~ps~~v~ls~~liv~Ga~  145 (271)
                      +.++++||+. +.+-|.|++++.+|..
T Consensus        60 ~s~~~L~r~l-s~~qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   60 FSVLLLKRRL-SRRQWLALFLLVAGVV   85 (244)
T ss_pred             HHHHHHHccc-chhhHHHHHHHHHHHh
Confidence            6678899985 8889999999999976

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=83.82  E-value=12  Score=30.82  Aligned_cols=47  Identities=11%  Similarity=0.217  Sum_probs=37.9

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      .|.+-. -..-..++++++++|+++.|+.+++|+.+-+.|.+.-+...
T Consensus        59 AYavw~-GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         59 AYALWE-GIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            555543 34577889999999999999999999999999988875444

>COG2510 Predicted membrane protein [Function unknown]

Probab=81.77  E-value=12  Score=31.57  Aligned_cols=95  Identities=14%  Similarity=0.088  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHhcccccccee-cCCCChhHHHHHHHHHHHHHHH---HHhhhhhhh---
Q 048307           46 LLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFID-HDLLTFVTMRRFASAAIIVYLS---LFANSELSI---  118 (271)
Q Consensus        46 ~mv~lNK~vL~~Fp~P~~L~~~Q~~vt~~il~vl~~~~g~v~-~~~~~~~~~~k~lPlsllFv~~---L~tn~~~L~---  118 (271)
                      +..+.-|.-+.+.+ |.+=++...++..+.+.......|..+ ....+.   |.|+-+.+-=+..   -..=.++|+   
T Consensus        17 L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~---k~~lflilSGla~glswl~Yf~ALk~G~   92 (140)
T COG2510          17 LTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGP---KSWLFLILSGLAGGLSWLLYFRALKKGK   92 (140)
T ss_pred             HHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCc---ceehhhhHHHHHHHHHHHHHHHHHhcCC
Confidence            45688898887766 555555555554444443222233332 222332   3333222211111   111122333   


Q ss_pred             -----------------heeeeecccCCchHHHHHHHHHHHHHH
Q 048307          119 -----------------AVSPFLHQPWPLIKTWFSLLTILGGSL  145 (271)
Q Consensus       119 -----------------~~~~~lg~~~ps~~v~ls~~liv~Ga~  145 (271)
                                       +..+|+|++ ++.+.++.+.+|++|++
T Consensus        93 as~VvPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gai  135 (140)
T COG2510          93 ASRVVPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAI  135 (140)
T ss_pred             cceEEEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCee
Confidence                             677889997 89999999999999974

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=81.40  E-value=9.5  Score=30.77  Aligned_cols=46  Identities=11%  Similarity=0.279  Sum_probs=37.4

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeec
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQS  228 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~a  228 (271)
                      .|.+-. -..-..+++.+.++|+++.|+..++|+.+-+.|.+.-+-.
T Consensus        59 AYavw~-GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         59 AYAIWS-GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            555543 3447788999999999999999999999999998887543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=81.30  E-value=3.1  Score=37.94  Aligned_cols=49  Identities=20%  Similarity=0.281  Sum_probs=45.4

Q ss_pred             HHhhhhHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecccC
Q 048307          182 GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTN  231 (271)
Q Consensus       182 T~svvG~~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak~~  231 (271)
                      ||.+.. ..+.+.++++++++.+.+.|..+|+++.+-.+|..+.+.....
T Consensus        45 t~qvl~-q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   45 TFQVLS-QSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHH-hhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            899999 8999999999999999999999999999999999998887743

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	271
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	90.92

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=90.92  E-value=0.18  Score=41.13  Aligned_cols=41  Identities=12%  Similarity=0.238  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHHHhcCcccchhhHHHHHHHHhhhhheeecc
Q 048307          189 AVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSP  229 (271)
Q Consensus       189 ~lnk~~~~v~~v~~fd~~~S~~~~~gi~i~l~gg~lYs~ak  229 (271)
                      .+.-+.++++++++++++.|+..++|+.+.+.|.++.+..+
T Consensus        65 ~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           65 GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34467888999999999999999999999999999887544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00