Citrus Sinensis ID: 048323

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MQGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS
Secondary Structure (PSIPRED)
ccccEEEEEccccccEEEccEEEEEEEEccccEEEEHHHHHHHHHHHHHccccEEEEEEEEEEEEcccccccccEEcEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccccccEEEcEEEEEEEEccccEEEEccHHHHHHHHHHHHHHHHHEEEEHHHHHHcccHHHccHHHEEEEEEEcccHHHcEEEccccccc
Coil and Loop (DISEMBL)
mqgswivrqsdgstpcllgkavdcnyirgpklMLACSSTVANGVLGLVIGVITAVVVDMAFLVQanttgelperLIGAVRVSYIELKsaivpklepets
Flexible Loop (DISEMBL)
mqgswivrqsdgstpclLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQanttgelperlIGAVRVSYIElksaivpklepets
Low Complexity Region (SEG)
MQGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS
Disordered region (IsUnstruct)
*****IV****GSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIV********
Disordered Region (DISOPRED)
*QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAI**K******
Disordered Region (DISEMBL)
MQGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS
Disordered Region (DISPRO)
*QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKL*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
224074418	723	predicted protein [Populus trichocarpa]	0.989	0.135	0.823	5e-40
224139070	725	predicted protein [Populus trichocarpa]	0.989	0.135	0.813	3e-39
356496432	725	PREDICTED: uncharacterized protein LOC10	0.989	0.135	0.803	4e-39
255557651	727	lipid binding protein, putative [Ricinus	0.989	0.134	0.803	3e-38
359474679	715	PREDICTED: uncharacterized protein LOC10	0.979	0.135	0.792	5e-38
225427395	722	PREDICTED: uncharacterized protein LOC10	0.979	0.134	0.792	5e-38
225427393	716	PREDICTED: uncharacterized protein LOC10	0.979	0.135	0.792	5e-38
296088382	710	unnamed protein product [Vitis vinifera]	0.979	0.136	0.792	5e-38
356531485	722	PREDICTED: uncharacterized protein LOC10	0.989	0.135	0.784	6e-38
440583727	858	hypothetical protein [Lupinus angustifol	0.989	0.114	0.764	9e-38

>gi|224074418|ref|XP_002304367.1| predicted protein [Populus trichocarpa] gi|222841799|gb|EEE79346.1| predicted protein [Populus trichocarpa]

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 84/102 (82%), Positives = 90/102 (88%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLVIGVIT +VV
Sbjct: 622 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 681

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFLVQANTT ELPERLIGAVRVS+IEL SAIVPKL+P+TS
Sbjct: 682 DMAFLVQANTTEELPERLIGAVRVSHIELSSAIVPKLDPDTS 723

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139070|ref|XP_002326760.1| predicted protein [Populus trichocarpa] gi|222834082|gb|EEE72559.1| predicted protein [Populus trichocarpa]

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 83/102 (81%), Positives = 89/102 (87%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLVIGVIT +VV
Sbjct: 624 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 683

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFLVQANTT ELPERLIGAVRVS+IEL SAIVPKL+P+ S
Sbjct: 684 DMAFLVQANTTEELPERLIGAVRVSHIELSSAIVPKLDPDPS 725

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496432|ref|XP_003517072.1| PREDICTED: uncharacterized protein LOC100806401 [Glycine max]

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/102 (80%), Positives = 89/102 (87%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLVIGVIT +VV
Sbjct: 624 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVV 683

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFLVQANT  ELPERLIGAVR+S++ELKSAIVPKLEP+ S
Sbjct: 684 DMAFLVQANTPDELPERLIGAVRISHLELKSAIVPKLEPDPS 725

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557651|ref|XP_002519855.1| lipid binding protein, putative [Ricinus communis] gi|223540901|gb|EEF42459.1| lipid binding protein, putative [Ricinus communis]

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 82/102 (80%), Positives = 88/102 (86%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLVIGVIT +VV
Sbjct: 626 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 685

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFLVQANTT ELPERLIGAVRVS+IEL SAIVPKL+ + S
Sbjct: 686 DMAFLVQANTTEELPERLIGAVRVSHIELSSAIVPKLDQDPS 727

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474679|ref|XP_003631511.1| PREDICTED: uncharacterized protein LOC100246589 [Vitis vinifera]

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 4/101 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLV GVIT +VV
Sbjct: 613 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 672

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPET 98
           DMAFLVQANT  ELPERLIGAVRVS++EL SAIVPKL+P+T
Sbjct: 673 DMAFLVQANTVDELPERLIGAVRVSHVELSSAIVPKLDPDT 713

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427395|ref|XP_002262787.1| PREDICTED: uncharacterized protein LOC100246589 isoform 3 [Vitis vinifera]

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 4/101 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLV GVIT +VV
Sbjct: 620 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 679

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPET 98
           DMAFLVQANT  ELPERLIGAVRVS++EL SAIVPKL+P+T
Sbjct: 680 DMAFLVQANTVDELPERLIGAVRVSHVELSSAIVPKLDPDT 720

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427393|ref|XP_002262725.1| PREDICTED: uncharacterized protein LOC100246589 isoform 1 [Vitis vinifera]

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 4/101 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLV GVIT +VV
Sbjct: 614 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 673

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPET 98
           DMAFLVQANT  ELPERLIGAVRVS++EL SAIVPKL+P+T
Sbjct: 674 DMAFLVQANTVDELPERLIGAVRVSHVELSSAIVPKLDPDT 714

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088382|emb|CBI37373.3| unnamed protein product [Vitis vinifera]

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 4/101 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLV GVIT +VV
Sbjct: 608 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 667

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPET 98
           DMAFLVQANT  ELPERLIGAVRVS++EL SAIVPKL+P+T
Sbjct: 668 DMAFLVQANTVDELPERLIGAVRVSHVELSSAIVPKLDPDT 708

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531485|ref|XP_003534308.1| PREDICTED: uncharacterized protein LOC100808706 [Glycine max]

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 80/102 (78%), Positives = 88/102 (86%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLVIGVIT +VV
Sbjct: 621 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVV 680

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFLVQANT  ELPERLIGAVR+S++ELKSAI+PKLE + S
Sbjct: 681 DMAFLVQANTPDELPERLIGAVRISHLELKSAIIPKLESDPS 722

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|440583727|emb|CCH47229.1| hypothetical protein [Lupinus angustifolius]

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 78/102 (76%), Positives = 89/102 (87%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPC+LGKAVDCNYIRGPK +       SSTVANGVLGLV+GVIT +VV
Sbjct: 757 KGSWIVRQSVGSTPCILGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVVGVITTLVV 816

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFL+QANT  ELPE+LIGAVRVS++ELKSAIVPKL+P+ S
Sbjct: 817 DMAFLIQANTPDELPEKLIGAVRVSHLELKSAIVPKLDPDPS 858

Source: Lupinus angustifolius

Species: Lupinus angustifolius

Genus: Lupinus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
TAIR|locus:2117134	724	EDR2 "ENHANCED DISEASE RESISTA	0.969	0.132	0.78	1.4e-32
TAIR|locus:2163548	719	AT5G45560 [Arabidopsis thalian	0.969	0.133	0.76	2.2e-32
TAIR|locus:2183705	302	AT5G10750 "AT5G10750" [Arabido	0.969	0.317	0.465	1.7e-18
TAIR|locus:2057547	737	AT2G28320 [Arabidopsis thalian	0.898	0.120	0.483	6e-17
TAIR|locus:2102465	733	AT3G54800 [Arabidopsis thalian	0.898	0.121	0.462	1.2e-15
TAIR|locus:2182417	811	AT5G35180 [Arabidopsis thalian	0.909	0.110	0.425	2.9e-15
TAIR|locus:2198866	313	AT1G06050 "AT1G06050" [Arabido	1.0	0.316	0.384	5.2e-15
TAIR|locus:2179255	269	AT5G25020 "AT5G25020" [Arabido	0.919	0.338	0.364	2.4e-12
TAIR|locus:2179245	286	AT5G25010 "AT5G25010" [Arabido	0.919	0.318	0.385	3.4e-12
TAIR|locus:2149428	294	AT5G24990 "AT5G24990" [Arabido	0.919	0.309	0.343	1.1e-11

TAIR|locus:2117134 EDR2 "ENHANCED DISEASE RESISTANCE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 78/100 (78%), Positives = 84/100 (84%)

Query:     2 QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLAC----SSTVANGVLGLVIGVITAVVV 57
             +GSWIVRQS GSTPCLLGKAVDCNYIRGP  +       SSTVANGVLGLVIGVIT++VV
Sbjct:   625 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPTYLEIDVDIGSSTVANGVLGLVIGVITSLVV 684

Query:    58 DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPE 97
             +MAFLVQANT  E PERLIGAVRVS+IEL SAIVP LE E
Sbjct:   685 EMAFLVQANTAEEQPERLIGAVRVSHIELSSAIVPNLESE 724

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008289 "lipid binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2163548 AT5G45560 [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 2.2e-32, P = 2.2e-32
 Identities = 76/100 (76%), Positives = 85/100 (85%)

Query:     2 QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLAC----SSTVANGVLGLVIGVITAVVV 57
             +GSWIVRQS GSTPCLLGKAVDCNYIRGP  +       SSTVANGVLGLVIGVIT++VV
Sbjct:   620 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPTYLEIDVDIGSSTVANGVLGLVIGVITSLVV 679

Query:    58 DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPE 97
             +MAFLVQANT  ELPERLIGAVRVS++EL SAIVP L+ +
Sbjct:   680 EMAFLVQANTPEELPERLIGAVRVSHVELSSAIVPNLDSD 719

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008289 "lipid binding" evidence=ISS

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2183705 AT5G10750 "AT5G10750" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 47/101 (46%), Positives = 64/101 (63%)

Query:     1 MQGSWIVRQSDGS-TPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAV 55
             ++G W+V+ + G+ + CLLGKA+ CNY RGP          SS +A  +L L +G +T+V
Sbjct:   178 VKGPWVVKAAVGNYSACLLGKALTCNYHRGPNYFEIDVDISSSAIATAILRLALGYVTSV 237

Query:    56 VVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEP 96
              +DM FL +A T  ELPERLIGAVRV  +E+ SA V    P
Sbjct:   238 TIDMGFLAEAQTEEELPERLIGAVRVCQMEMSSAFVVDAPP 278

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057547 AT2G28320 [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 6.0e-17, P = 6.0e-17
 Identities = 45/93 (48%), Positives = 64/93 (68%)

Query:     2 QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLM-LAC---SSTVANGVLGLVIGVITAVVV 57
             +GSWIV+QS G   CL+G+A++ NY RG   + L     SSTVA GV+ LV+G +  +V+
Sbjct:   641 KGSWIVKQSVGKKACLIGQALEINYFRGKNYIELGVDIGSSTVARGVVSLVLGYLNKLVI 700

Query:    58 DMAFLVQANTTGELPERLIGAVRVSYIELKSAI 90
             +MAFL+QANT  ELPE L+G  R ++++   AI
Sbjct:   701 EMAFLIQANTEEELPEYLLGTCRFNHLDASKAI 733

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2102465 AT3G54800 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 43/93 (46%), Positives = 63/93 (67%)

Query:     2 QGSWIVRQSDGSTPCLLGKAVDCNYIRGPK-LMLAC---SSTVANGVLGLVIGVITAVVV 57
             +GSWIV+QS G   CL+G+ ++  Y RG   L L     SSTVA GV  LV+G +  +V+
Sbjct:   638 KGSWIVKQSVGKKACLVGQVLEVCYTRGKNYLELDIDVGSSTVARGVTNLVLGYLNNLVI 697

Query:    58 DMAFLVQANTTGELPERLIGAVRVSYIELKSAI 90
             +MAFL+QANT  ELPE L+G  R++Y+++  ++
Sbjct:   698 EMAFLIQANTVEELPELLLGTCRLNYLDVSKSV 730

GO:0005543 "phospholipid binding" evidence=IEA

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

TAIR|locus:2182417 AT5G35180 [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 2.9e-15, P = 2.9e-15
 Identities = 40/94 (42%), Positives = 63/94 (67%)

Query:     1 MQGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLAC----SSTVANGVLGLVIGVITAVV 56
             +QG W+V+++ G+  CLLGKAV C Y+R    +       SS VA  V+GLV+G +T+++
Sbjct:   714 VQGYWMVKRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAVARSVIGLVLGYVTSLI 773

Query:    57 VDMAFLVQANTTGELPERLIGAVRVSYIELKSAI 90
             VD+A L++     +LPE ++G VR++ IEL SA+
Sbjct:   774 VDLAILIEGKEESDLPEYILGTVRLNRIELDSAV 807

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2198866 AT1G06050 "AT1G06050" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 5.2e-15, P = 5.2e-15
 Identities = 40/104 (38%), Positives = 65/104 (62%)

Query:     1 MQGSWIVRQSDGSTP-CLLGKAVDCNYIRGPKLMLAC----SSTVANGVLGLVIGVITAV 55
             ++G WIVR++ G    C++G+A+ C Y+ G   +       SS VA+ ++ L  G +T +
Sbjct:   160 VKGPWIVRKAVGEQAICVIGRALSCKYVSGENFVEIDVDIGSSMVASAIVHLAFGYVTTL 219

Query:    56 VVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
              VD+AFL+++ T  ELPE+L+GAVR S ++ +SA   +L   TS
Sbjct:   220 TVDLAFLIESQTEAELPEKLLGAVRFSELQTESATSIELSSSTS 263

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2179255 AT5G25020 "AT5G25020" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 35/96 (36%), Positives = 57/96 (59%)

Query:     1 MQGSWIVRQSDGSTPCLL-GKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAV 55
             ++G W+V+ + G     + GKA+ C+Y RG           SS +   ++  ++G +T +
Sbjct:   144 VKGPWVVKAAAGKFGAFVAGKAMKCSYHRGDNYFEVDVDISSSAIMTALIRFMLGYVTYL 203

Query:    56 VVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIV 91
             +VD+ F+V+A T  ELPERLIG  R+ ++EL SA V
Sbjct:   204 MVDIGFVVEAQTEEELPERLIGGARICHMELSSAFV 239

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2179245 AT5G25010 "AT5G25010" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 3.4e-12, P = 3.4e-12
 Identities = 37/96 (38%), Positives = 55/96 (57%)

Query:     1 MQGSWIVRQSDGSTPCLL-GKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAV 55
             ++G W+V+ + G     L GK V C+Y RG            S + + ++ L +G +T +
Sbjct:   172 VKGPWVVKATAGKLGAFLAGKVVKCSYYRGANYFEVDVDFSISAIYSALVRLTLGYVTNL 231

Query:    56 VVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIV 91
             V D+ F+V+A T  ELPERLIG  RV Y+EL SA +
Sbjct:   232 VADVGFVVEAQTEEELPERLIGGGRVCYMELSSAFL 267

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2149428 AT5G24990 "AT5G24990" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 33/96 (34%), Positives = 56/96 (58%)

Query:     1 MQGSWIVRQSDGSTPCLL-GKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAV 55
             ++G W+V+ + G     + GKA+ C Y RG           SS +   ++  ++G +T +
Sbjct:   173 VKGPWVVKAAAGKFGAFVAGKAMKCTYYRGDNYFEVDVDISSSAIMTALIRFMLGYVTYL 232

Query:    56 VVDMAFLVQANTTGELPERLIGAVRVSYIELKSAIV 91
             +VD+ F+V+A T  ELPERLIG  R+ ++EL S+ +
Sbjct:   233 MVDIGFVVEAQTAEELPERLIGGARICHMELSSSFL 268


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        99   0.00091  102 3  11 22  0.38    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  493 (52 KB)
  Total size of DFA:  98 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.31u 0.14s 9.45t   Elapsed:  00:00:00
  Total cpu time:  9.31u 0.14s 9.45t   Elapsed:  00:00:00
  Start:  Fri May 10 22:02:57 2013   End:  Fri May 10 22:02:57 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_III000277 enhanced disease resistance protein (EDR2) (723 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	99
PLN00188	719	PLN00188, PLN00188, enhanced disease resistance pr	7e-59
pfam07059	215	pfam07059, DUF1336, Protein of unknown function (D	5e-32

>gnl|CDD|215094 PLN00188, PLN00188, enhanced disease resistance protein (EDR2); Provisional

 Score =  191 bits (486), Expect = 7e-59
 Identities = 82/102 (80%), Positives = 89/102 (87%), Gaps = 4/102 (3%)

Query: 2   QGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLMLA----CSSTVANGVLGLVIGVITAVVV 57
           +GSWIVRQS GSTPCLLGKAVDCNYIRGPK +       SSTVANGVLGLVIGVIT +VV
Sbjct: 618 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVV 677

Query: 58  DMAFLVQANTTGELPERLIGAVRVSYIELKSAIVPKLEPETS 99
           DMAFLVQANT  ELPERLIGAVRVS++EL SAIVPKL+P+TS
Sbjct: 678 DMAFLVQANTYEELPERLIGAVRVSHVELSSAIVPKLDPDTS 719

Length = 719

>gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336)

 Score =  110 bits (278), Expect = 5e-32
 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 5/89 (5%)

Query: 2   QGSWIVRQS-DGSTPCLLGKAVDCNYIRGPK-LMLAC---SSTVANGVLGLVIGVITAVV 56
           +GSWIVRQ      PCL+GKA  CNY RGP  L +     SS++A   L L +G +T +V
Sbjct: 127 KGSWIVRQLVYNEKPCLVGKAPQCNYYRGPNYLEIDVDIGSSSIARKGLELFLGYLTNLV 186

Query: 57  VDMAFLVQANTTGELPERLIGAVRVSYIE 85
           +D+AF +Q  T  ELPERL+GAVR++ I+
Sbjct: 187 LDLAFTIQGQTEEELPERLLGAVRLNKID 215

This family represents the C-terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function. Length = 215

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
PLN00188	719	enhanced disease resistance protein (EDR2); Provis	100.0
PF07059	227	DUF1336: Protein of unknown function (DUF1336); In	100.0

>PLN00188 enhanced disease resistance protein (EDR2); Provisional

Probab=100.00  E-value=1.3e-41  Score=292.15  Aligned_cols=99  Identities=83%  Similarity=1.201  Sum_probs=96.2

Q ss_pred             CccceEEEeccCCCceEecceeeeeEeeCCCeEE----EechHHHHHHHHhhhccceeEEEeeeEeeecCCCCCcccccc
Q 048323            1 MQGSWIVRQSDGSTPCLLGKAVDCNYIRGPKLML----ACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERLI   76 (99)
Q Consensus         1 ~~GpwiVr~aVg~~P~llGk~l~~~y~~g~nYlE----I~sS~iA~~i~~l~~g~~~~lvvD~gf~Ieg~~e~ELPE~lL   76 (99)
                      +||||||||+||+|||||||+++|+||+|+||||    |+||++|+++++||+||+++|+|||||+||||++|||||+||
T Consensus       617 v~GpWiVk~aVG~~p~llGk~l~~~Y~~g~nylEvdvDi~ss~va~~v~~l~~g~~~~lvvD~af~ie~~~~eELPE~ll  696 (719)
T PLN00188        617 PKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTYEELPERLI  696 (719)
T ss_pred             cCCceEEEeccCCcceEeeeecceeEecCCCeEEEEEeeccHHHHHHHHHHHHhhhhheEEEEEEEEecCChhhCchhhe
Confidence            6999999999999999999999999999999999    679999999999999999999999999999999999999999


Q ss_pred             ceEEecccccCcccCCCCCCCCC
Q 048323           77 GAVRVSYIELKSAIVPKLEPETS   99 (99)
Q Consensus        77 G~vRl~~ld~~~A~~~~~~~~~~   99 (99)
                      ||+|++++|+++|+.++++|.++
T Consensus       697 G~~Rl~~i~~~~A~~~~~~~~~~  719 (719)
T PLN00188        697 GAVRVSHVELSSAIVPKLDPDTS  719 (719)
T ss_pred             eeEEecccchhhccccCCCCCCC
Confidence            99999999999999999998764

>PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function

Probab=100.00  E-value=2.9e-40  Score=252.40  Aligned_cols=85  Identities=44%  Similarity=0.790  Sum_probs=82.6

Q ss_pred             CccceEEEecc-CCCceEecceeeeeEeeCCCeEE----EechHHHHHHHHhhhccceeEEEeeeEeeecCCCCCccccc
Q 048323            1 MQGSWIVRQSD-GSTPCLLGKAVDCNYIRGPKLML----ACSSTVANGVLGLVIGVITAVVVDMAFLVQANTTGELPERL   75 (99)
Q Consensus         1 ~~GpwiVr~aV-g~~P~llGk~l~~~y~~g~nYlE----I~sS~iA~~i~~l~~g~~~~lvvD~gf~Ieg~~e~ELPE~l   75 (99)
                      ++||||||++| |+|||||||+++|+||+|+||||    |+||++|++++++|+||+++|+|||||+|||+++|||||||
T Consensus       138 v~gpwivr~~v~~~kP~lig~~~~~~y~~g~~y~E~dvdi~ss~~a~~~~~~~~~~~~~lvvd~gf~ieg~~~~ELPE~l  217 (227)
T PF07059_consen  138 VNGPWIVRKAVYNGKPVLIGKKLQHRYFRGPNYLEIDVDIHSSYIARKVLHLVRGYLKKLVVDMGFVIEGQTEEELPERL  217 (227)
T ss_pred             cCCchhhhhhhcCCCceeecCccceEEeeCCCeEEEEEEeccHHHHHHHHHHHHhhhceEEEEEEEEecCCChhhCchhe
Confidence            57999999999 89999999999999999999999    45899999999999999999999999999999999999999


Q ss_pred             cceEEecccc
Q 048323           76 IGAVRVSYIE   85 (99)
Q Consensus        76 LG~vRl~~ld   85 (99)
                      |||+||+|||
T Consensus       218 Lg~~Rl~~id  227 (227)
T PF07059_consen  218 LGCVRLNHID  227 (227)
T ss_pred             EeEEEeeecC
Confidence            9999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00