Citrus Sinensis ID: 048342
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| 225452406 | 329 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.942 | 0.568 | 1e-100 | |
| 225457003 | 326 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.957 | 0.526 | 1e-95 | |
| 224060113 | 330 | predicted protein [Populus trichocarpa] | 0.962 | 0.930 | 0.531 | 1e-91 | |
| 356507258 | 348 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.908 | 0.511 | 2e-91 | |
| 449469701 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.851 | 0.504 | 1e-90 | |
| 224133574 | 347 | predicted protein [Populus trichocarpa] | 0.990 | 0.910 | 0.474 | 2e-89 | |
| 363807698 | 348 | uncharacterized protein LOC100804037 [Gl | 0.990 | 0.908 | 0.505 | 3e-89 | |
| 356558861 | 332 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.933 | 0.501 | 7e-87 | |
| 357135474 | 331 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.948 | 0.472 | 1e-86 | |
| 297793887 | 347 | hypothetical protein ARALYDRAFT_919578 [ | 0.981 | 0.902 | 0.504 | 9e-86 |
| >gi|225452406|ref|XP_002273842.1| PREDICTED: uncharacterized protein LOC100247330 [Vitis vinifera] gi|296087638|emb|CBI34894.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/338 (56%), Positives = 240/338 (71%), Gaps = 28/338 (8%)
Query: 1 MVGLIAADTTALSYWFNWRFFLCAIWILFCFGMSSFFIWKEECFDNFKSNGGGTQQDTCN 60
M+ + ADTT LSYW NWR LC IW+L +++F IWK E + KS T+QD
Sbjct: 1 MLLVETADTTTLSYWMNWRVLLCTIWVLTPMIVAAFIIWKYEGPKHPKSEREETEQDIDR 60
Query: 61 ----DDEWRPILKQVHPFWLLAFRVTAFCFLLTTLIVKVLINGGTIFFYYTQWTFTLLTI 116
+ WRP L+++HP WLLAFR+ +FCFLL TLI +V+I+GG +FFYYTQWTFTL+TI
Sbjct: 61 FFSVEKAWRPCLEEIHPCWLLAFRIISFCFLLATLIGEVVIHGGGMFFYYTQWTFTLVTI 120
Query: 117 YFGFGSLLSIYGCHRCHKISRGSIIVHHNGVAEDQRNS-IPLTNG------------GNT 163
YFGFGSLLSIYGC++ K+S GV + ++ S +PL G G+
Sbjct: 121 YFGFGSLLSIYGCYQYDKMS---------GVTDSEQGSYMPLLYGDGINKSRMRKTLGSP 171
Query: 164 QEK--FQASAVIRYLFQVLFQTIAGAVVLTDLVYWGVIFPFLTLEEYKLNLMTVNMHAIN 221
+E Q A+ +LFQV+FQ AGAV+LTD +YW +IFPFLT+++Y ++ MTVNMH +N
Sbjct: 172 EENSLLQTEAIWSHLFQVIFQINAGAVMLTDCIYWFIIFPFLTIKDYNMSFMTVNMHTLN 231
Query: 222 AFFLLGDTALNSMQFPWFRISYFILWTSIFVIFQWILHASVSIWWPYPFLELSSPFAPLW 281
A LL DTALN + FPWFRI+YF+LWT IFVIFQWI+HA VSIWWPYPFL+LSSPFAPLW
Sbjct: 232 AVLLLCDTALNCLPFPWFRIAYFVLWTGIFVIFQWIIHACVSIWWPYPFLDLSSPFAPLW 291
Query: 282 YLLVGLAHFPCYCIFALVMKLKHFLLSKWFAHSYQGLR 319
YL V L H PCY IFALV+++KH LLSKWF SYQ LR
Sbjct: 292 YLAVALMHIPCYAIFALVVEIKHNLLSKWFPQSYQCLR 329
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457003|ref|XP_002282364.1| PREDICTED: uncharacterized protein LOC100245004 [Vitis vinifera] gi|297733765|emb|CBI15012.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224060113|ref|XP_002300043.1| predicted protein [Populus trichocarpa] gi|222847301|gb|EEE84848.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356507258|ref|XP_003522386.1| PREDICTED: uncharacterized protein LOC100799543 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449469701|ref|XP_004152557.1| PREDICTED: uncharacterized protein LOC101203045 [Cucumis sativus] gi|449487859|ref|XP_004157836.1| PREDICTED: uncharacterized protein LOC101223623 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224133574|ref|XP_002321608.1| predicted protein [Populus trichocarpa] gi|222868604|gb|EEF05735.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|363807698|ref|NP_001242678.1| uncharacterized protein LOC100804037 [Glycine max] gi|255636033|gb|ACU18361.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|356558861|ref|XP_003547721.1| PREDICTED: uncharacterized protein LOC100815819 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357135474|ref|XP_003569334.1| PREDICTED: uncharacterized protein LOC100846204 [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|297793887|ref|XP_002864828.1| hypothetical protein ARALYDRAFT_919578 [Arabidopsis lyrata subsp. lyrata] gi|297310663|gb|EFH41087.1| hypothetical protein ARALYDRAFT_919578 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 319 | ||||||
| TAIR|locus:2166290 | 347 | AT5G62960 "AT5G62960" [Arabido | 0.981 | 0.902 | 0.504 | 2.6e-86 | |
| TAIR|locus:2019928 | 320 | AT1G10660 "AT1G10660" [Arabido | 0.949 | 0.946 | 0.490 | 6.8e-79 | |
| TAIR|locus:2089174 | 315 | AT3G27770 "AT3G27770" [Arabido | 0.934 | 0.946 | 0.485 | 1.4e-78 | |
| TAIR|locus:505006323 | 300 | AT2G47115 "AT2G47115" [Arabido | 0.714 | 0.76 | 0.431 | 1.3e-52 | |
| TAIR|locus:504956261 | 358 | AT1G70505 "AT1G70505" [Arabido | 0.727 | 0.648 | 0.412 | 1.2e-44 | |
| UNIPROTKB|G4N732 | 274 | MGG_03627 "Uncharacterized pro | 0.448 | 0.521 | 0.243 | 5.1e-06 |
| TAIR|locus:2166290 AT5G62960 "AT5G62960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 162/321 (50%), Positives = 216/321 (67%)
Query: 7 ADTTALSYWFNWRFFLCAIWILFCFGMSSFFIWKEECFDNFKSN-G---GGTQQDTCN-- 60
A+TT SYWFNWR +C IW+ +++F I+K E F +S+ G GG ++ + N
Sbjct: 27 ANTTESSYWFNWRVMICCIWMAIATVITAFLIFKYEGFRRKRSDVGEVDGGEKEWSGNVY 86
Query: 61 -DDEWRPILKQVHPFWLLAFRVTAFCFLLTTLIVKVLINGGTIFFYYTQWTFTLLTIYFG 119
D+ WRP L+ +HP WLLAFRV AF LL LIV L++G TIFFYYTQWTF L+T+YFG
Sbjct: 87 EDETWRPCLRNIHPAWLLAFRVVAFFVLLVMLIVIGLVDGPTIFFYYTQWTFGLITLYFG 146
Query: 120 FGSLLSIYGCHRCHKISRGSIIVHHNGVAEDQRNSIPLTNG-GNTQEKFQASAVIRYLFQ 178
GSLLS++GC++ +K + G + + ++ S N +Q + Y+FQ
Sbjct: 147 LGSLLSLHGCYQYNKRAAGDRVDSIEAIDSERARSKGADNTIQQSQYSSNPAGFWGYVFQ 206
Query: 179 VLFQTIAGAVVLTDLVYWGVIFPFLTLEEYKLNLMTVNMHAINAFFLLGDTALNSMQFPW 238
++FQ AGAV+LTD V+W +I PFL + +Y LN++ +NMH++NA FLLGD ALNS+ FP
Sbjct: 207 IIFQMNAGAVLLTDCVFWFIIVPFLEIHDYSLNVLVINMHSLNAIFLLGDAALNSLSFPC 266
Query: 239 FRISYFILWTSIFVIFQWILHASVSIWWPYPFLELSSPFAPLWYLLVGLAHFPCYCIFAL 298
FRI+YF WT +VIFQW LH+ V IWWPYPFL+LSS +APLWY V + H PCY FAL
Sbjct: 267 FRIAYFFFWTIAYVIFQWALHSLVHIWWPYPFLDLSSHYAPLWYFSVAVMHLPCYGAFAL 326
Query: 299 VMKLKHFLLSKWFAHSYQGLR 319
++KLKH LL +WF SYQ R
Sbjct: 327 LVKLKHRLLQRWFPESYQSPR 347
|
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| TAIR|locus:2019928 AT1G10660 "AT1G10660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2089174 AT3G27770 "AT3G27770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006323 AT2G47115 "AT2G47115" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504956261 AT1G70505 "AT1G70505" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4N732 MGG_03627 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00020705001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (329 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 319 | |||
| PF04750 | 201 | Far-17a_AIG1: FAR-17a/AIG1-like protein; InterPro: | 99.55 | |
| KOG3989 | 224 | consensus Beta-2-glycoprotein I [Extracellular str | 98.52 |
| >PF04750 Far-17a_AIG1: FAR-17a/AIG1-like protein; InterPro: IPR006838 This entry includes the hamster androgen-induced FAR-17a protein (Q60534 from SWISSPROT) [] | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.9e-14 Score=126.13 Aligned_cols=156 Identities=23% Similarity=0.387 Sum_probs=113.3
Q ss_pred cCCEEEEEehhhhHHHHHHHHHHHHHHHHhhhhhhcccccCccccccCCcccccCccccCCCCCCchhhhhhhhhhHHH-
Q 048342 98 NGGTIFFYYTQWTFTLLTIYFGFGSLLSIYGCHRCHKISRGSIIVHHNGVAEDQRNSIPLTNGGNTQEKFQASAVIRYL- 176 (319)
Q Consensus 98 ~g~~~F~YyT~Wtf~LltiYF~las~~S~~g~~~y~~~~~~~~v~~~~~~d~e~~~~~~~~~~~~~~~kr~~ag~w~~~- 176 (319)
.-|+.|.|+|+|+..+.++||+++.+... ++ + ++ ....
T Consensus 30 ~~gg~~~fLT~~~~~~~~~~~~~~~~~d~-------~~--~----------------------------~~----l~~~~ 68 (201)
T PF04750_consen 30 SYGGRFKFLTNWSLVLQTIYFILALLCDL-------FS--S----------------------------RK----LRKLR 68 (201)
T ss_pred hhcCcceehhHHHHHHHHHHHHHHHHHHh-------cc--c----------------------------HH----HHHHH
Confidence 35678899999999999999988866554 10 0 00 0112
Q ss_pred HHHHHHHhhhhHhhhheeEEEEee--ccccccc-c---ccccccchhhhHHHHHHHHHHhhcCC--CCchhHHHHHHHHH
Q 048342 177 FQVLFQTIAGAVVLTDLVYWGVIF--PFLTLEE-Y---KLNLMTVNMHAINAFFLLGDTALNSM--QFPWFRISYFILWT 248 (319)
Q Consensus 177 ~qilfqt~a~a~~LtdiVyW~iL~--p~l~~~~-~---~lnf~~i~~H~lNavflL~D~~Ln~~--P~p~~h~~Y~vl~~ 248 (319)
-+.+++++...+++|+++||++.. |-+-.|+ . -...+|.++|++|++++++|..+.+. |.+..++......+
T Consensus 69 ~~~~~~~~~pl~~~V~~~yW~l~~~dp~lv~p~~~~~~ip~wln~~~H~~~~i~llid~~~~~~~~~~~~~~~~~~~~~~ 148 (201)
T PF04750_consen 69 DWLFYSLAFPLEFIVTVVYWSLYLIDPELVFPKWLDNVIPLWLNHSMHTLPLIFLLIDLFLFKHRYPSRKKALLISFAFG 148 (201)
T ss_pred HHHHHHHHHHHHhcchhhhhhHHhCCHHhcCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHH
Confidence 466788999999999999999642 2211121 1 12358999999999999999999885 55666888888899
Q ss_pred HHHHHHHHHHHhhccCccccccccCCCCCc-hhhHHHHHHHHHHHHHH
Q 048342 249 SIFVIFQWILHASVSIWWPYPFLELSSPFA-PLWYLLVGLAHFPCYCI 295 (319)
Q Consensus 249 ~~YviF~~I~ha~g~~~w~YpFLD~~~p~a-pl~y~~v~~~hi~~y~~ 295 (319)
.+|.+.....+...| .|||||||..++.. .+.+.+..++...+|.+
T Consensus 149 ~~Y~~~~~~~~~~~g-~wpYPfl~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (201)
T PF04750_consen 149 LAYIIWIEYIYYVNG-FWPYPFLDVLSPPGRVVFFAVSFLLAFLLYLL 195 (201)
T ss_pred HHHHhheeEEEeCCC-eeCCCCcCCCCcchhheehHHHHHHHHHHHHH
Confidence 999988777777756 89999999877654 55566666666555544
|
The function of these proteins is unknown but it is thought to have a central role in the fusion process during myogenesis, within the somatic mesoderm. This entry also includes homologous regions from a number of other metazoan proteins.; GO: 0016021 integral to membrane |
| >KOG3989 consensus Beta-2-glycoprotein I [Extracellular structures] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00