Citrus Sinensis ID: 048543

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSLRAKRNL
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccHHccccHcHEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEEEEEEHHEHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAAKIGSFRHSFAERSKERLlsrkgysdfglnstdddgsedgikcrcfRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFkeplsnvsqySIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSvcrglpgsyychqyfYSRLASFFLLTYCIVLVsgtsttffRTAFYRLVLIAVGAGICLVVNVCiypmwageDLHKLVVKFSKasllpwkcveyervpskILTYQASEFLMTQRIVVIDRLYSLRAKRNL
Flexible Loop (DISEMBL)
maakigsfrhsfaerskerllsrkgysdfglnstdddgsedgIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTyqaseflmtqriVVIDRLYSLRAKRNL
Low Complexity Region (SEG)
MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGlslalvslvvFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSLRAKRNL
Disordered region (IsUnstruct)
*****************************************GIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSL******
Disordered Region (DISOPRED)
************************************************RWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSL******
Disordered Region (DISEMBL)
MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSLRAKRNL
Disordered Region (DISPRO)
***************************DF*L*********DGIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSLRAKR**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVEYERVPSKILTYQASEFLMTQRIVVIDRLYSLRAKRNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
Q9C6L8	548	Aluminum-activated malate	yes	no	0.868	0.447	0.537	3e-69
Q9LS46	598	Aluminum-activated malate	no	no	0.914	0.431	0.468	2e-61
Q9SHM1	538	Aluminum-activated malate	no	no	0.769	0.403	0.489	3e-56
Q93Z29	537	Aluminum-activated malate	no	no	0.840	0.441	0.459	3e-53
Q9LPQ8	581	Putative aluminum-activat	no	no	0.865	0.419	0.432	1e-51
Q9LS22	543	Aluminum-activated malate	no	no	0.652	0.338	0.358	2e-27
Q9LS23	539	Aluminum-activated malate	no	no	0.606	0.317	0.357	2e-26
O49696	560	Aluminum-activated malate	no	no	0.620	0.312	0.368	7e-26
Q9SJE8	501	Aluminum-activated malate	no	no	0.563	0.317	0.361	8e-25
Q76LB1	459	Aluminum-activated malate	N/A	no	0.553	0.339	0.423	1e-24

>sp|Q9C6L8|ALMT4_ARATH Aluminum-activated malate transporter 4 OS=Arabidopsis thaliana GN=ALMT4 PE=3 SV=1

 Score =  261 bits (668), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 150/279 (53%), Positives = 185/279 (66%), Gaps = 34/279 (12%)

Query: 12  FAERSKERLLSRKGYSDFGLNST---DDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQ 68
            A++++E  LSRK  SDFG N +   DD  S    K RCFR+ SDG+   W  L +I  +
Sbjct: 1   MADQTREAFLSRKACSDFGFNDSNIIDDRRS----KFRCFRFCSDGITASWKALYDIGAK 56

Query: 69  FYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGAT 128
            Y+MGR D RK  F+ KMG++LAL S V++ KEPL + S+Y++WAILTVVVVFE+S+GAT
Sbjct: 57  LYEMGRSDRRKVYFSVKMGMALALCSFVIYLKEPLRDASKYAVWAILTVVVVFEYSIGAT 116

Query: 129 LNKGFNRALGTFSAGGLSLGIAELSVCRG------------LPGSYYCHQYFYSRLASF- 175
           L KGFNRA+GT SAGGL+LGIA LSV  G            + G    +   Y  + S+ 
Sbjct: 117 LVKGFNRAIGTLSAGGLALGIARLSVSAGEFEELIIIISIFIAGFSASYLKLYPAMKSYE 176

Query: 176 -----FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKL 229
                FLLTYCIVLVSG  S  FF TA+YR +LI VGAGICL VN+ I P+WAGEDLHKL
Sbjct: 177 YAFRVFLLTYCIVLVSGNNSRDFFSTAYYRFLLILVGAGICLGVNIFILPIWAGEDLHKL 236

Query: 230 VVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           VVK  K  A+ L        +CVEYER+PSKILTYQAS+
Sbjct: 237 VVKNFKSVANSLEGCVNGYLQCVEYERIPSKILTYQASD 275

Malate transporter.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS46|ALMT9_ARATH Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana GN=ALMT9 PE=2 SV=1

 Score =  236 bits (601), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/297 (46%), Positives = 191/297 (64%), Gaps = 39/297 (13%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDF---GLNSTDDDGSEDGIK-------CRCFRW 50
           MAAK GSFRH   E+ +ERLLS  G+SDF    + S D   +E+  +       C C   
Sbjct: 1   MAAKQGSFRHGILEK-RERLLSNNGFSDFRFTDIESNDLLENENCGRRTRLCCCCSCGN- 58

Query: 51  ISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYS 110
           +S+ +   + + +++  + ++MG  DPRK VF+AK+GL+L +V+L++F++EP  ++S+YS
Sbjct: 59  LSEKISGVYDDAKDVARKAWEMGVSDPRKIVFSAKIGLALTIVALLIFYQEPNPDLSRYS 118

Query: 111 IWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCH----- 165
           +WAILTVVVVFEF++GATL+KGFNRALGT SAGGL+LG+AELS   G     +C      
Sbjct: 119 VWAILTVVVVFEFTIGATLSKGFNRALGTLSAGGLALGMAELSTLFGDWEEIFCTLSIFC 178

Query: 166 -------QYFYSRLASF------FLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICL 211
                     Y  + ++      FLLTYC +L+SG  T  F   A  R +LIA+GAG+ L
Sbjct: 179 IGFLATFMKLYPSMKAYEYGFRVFLLTYCYILISGFRTGQFIEVAISRFLLIALGAGVSL 238

Query: 212 VVNVCIYPMWAGEDLHKLVVK--FSKASLLP------WKCVEYERVPSKILTYQASE 260
            VN+ IYP+WAGEDLH LVVK   + A+ L        +C+EYER+PSKILTYQASE
Sbjct: 239 GVNMFIYPIWAGEDLHNLVVKNFMNVATSLEGCVNGYLRCLEYERIPSKILTYQASE 295

Vacuolar malate channel. Has a higher selectivity for malate than for fumarate. Exhibits also a weak chloride conductance.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHM1|ALMT6_ARATH Aluminum-activated malate transporter 6 OS=Arabidopsis thaliana GN=ALMT6 PE=3 SV=1

 Score =  218 bits (556), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/276 (48%), Positives = 166/276 (60%), Gaps = 59/276 (21%)

Query: 12  FAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFYD 71
           F ++S+ERLLS+  YSD                  CFR I        TNL        +
Sbjct: 4   FHQQSRERLLSQNEYSDM-----------------CFRKI--------TNL-------CE 31

Query: 72  MGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNK 131
           +G  D R+  FA KMG++LAL S+V+F KEPL + S+YS+W ILTVVVVFE+SVGATL K
Sbjct: 32  LGHSDRRRIFFAVKMGMALALCSVVIFLKEPLHDASKYSVWGILTVVVVFEYSVGATLVK 91

Query: 132 GFNRALGTFSAGGLSLGIAELSV------------CRGLPGSYYCHQYFYSRLASF---- 175
           GFNRA+GT SAGGL+LGIA LSV            C  L G    +   +  +  +    
Sbjct: 92  GFNRAIGTVSAGGLALGIARLSVLSRDFEQTIIITCIFLAGFIASYSKLHPAMKPYEYAF 151

Query: 176 --FLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVK 232
             FLLT+CIVLVSG +T  FF TA+YR + I VGA  CLVVN+ I+P+WAGEDLHKLV  
Sbjct: 152 RVFLLTFCIVLVSGNNTGDFFSTAYYRFLFIVVGATTCLVVNIFIFPIWAGEDLHKLVAN 211

Query: 233 FSK--ASLLP------WKCVEYERVPSKILTYQASE 260
             K  A+ L        +CVEYERVPSKILTYQ S+
Sbjct: 212 NFKSVANSLEGCVNGYLQCVEYERVPSKILTYQTSD 247

Malate transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93Z29|ALMT5_ARATH Aluminum-activated malate transporter 5 OS=Arabidopsis thaliana GN=ALMT5 PE=2 SV=1

 Score =  209 bits (531), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/287 (45%), Positives = 171/287 (59%), Gaps = 50/287 (17%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           M  K+GS      E++ E+LL           S+D   S D  K RC  W +        
Sbjct: 1   MGGKMGSV----PEQNTEKLL---------WQSSDVADSRDS-KFRCCSWRA-------- 38

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
            L     + Y +G  D RK  F+ KMG++LAL S V+F KEPL + S++++WAILTVV++
Sbjct: 39  -LYEAPAKLYALGHSDRRKLYFSIKMGIALALCSFVIFLKEPLQDASKFAVWAILTVVLI 97

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG------------LPGSYYCHQYF 168
           FE+ VGATL KGFNRALGT  AGGL+LG+A+LSV  G            L G    +   
Sbjct: 98  FEYYVGATLVKGFNRALGTMLAGGLALGVAQLSVLAGEFEEVIIVICIFLAGFGASYLKL 157

Query: 169 YSRLASF------FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMW 221
           Y+ +  +      F LTYCIVLVSG  S  F  TA+YR++LI +GA ICL+VNV ++P+W
Sbjct: 158 YASMKPYEYAFRVFKLTYCIVLVSGNNSRDFLSTAYYRILLIGLGATICLLVNVFLFPIW 217

Query: 222 AGEDLHKLVVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           AGEDLHKLV K  K  A+ L        +CVEYER+PSKILTYQAS+
Sbjct: 218 AGEDLHKLVAKNFKNVANSLEGCVNGYLQCVEYERIPSKILTYQASD 264

Malate transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPQ8|ALMT3_ARATH Putative aluminum-activated malate transporter 3 OS=Arabidopsis thaliana GN=ALMT3 PE=3 SV=1

 Score =  203 bits (517), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/280 (43%), Positives = 169/280 (60%), Gaps = 36/280 (12%)

Query: 6   GSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNI 65
           GSFR S  +R    +L  +GYS    N  DDD +   ++C  + + SD +      L+++
Sbjct: 27  GSFRQSMRDR---LILQSRGYS----NVNDDDKT--SVRCCSYSYFSDKITGVVKKLKDV 77

Query: 66  FIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSV 125
            +  ++MG  DPRK +F+AKMGL+L L S+++FFK P   +S + +WAILTVVV+FEFS+
Sbjct: 78  LVTAWEMGTADPRKMIFSAKMGLALTLTSILIFFKIPGLELSGHYLWAILTVVVIFEFSI 137

Query: 126 GATLNKGFNRALGTFSAGGLSLGIAELSVCRG------LPGSYYCHQYF--YSRLAS--- 174
           GAT +KG NR LGT SAGGL+LG++ +S   G         S +   +F  Y++L     
Sbjct: 138 GATFSKGCNRGLGTLSAGGLALGMSWISEMTGNWADVFNAASIFVVAFFATYAKLYPTMK 197

Query: 175 -------FFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDL 226
                   FLLTYC V+VSG  T  F  TA  R +LIA+GA + L+VN CIYP+WAGEDL
Sbjct: 198 PYEYGFRVFLLTYCYVIVSGYKTGEFMETAVSRFLLIALGASVGLIVNTCIYPIWAGEDL 257

Query: 227 HKLVVK--FSKASLLP------WKCVEYERVPSKILTYQA 258
           H LV K   + A+ L        +CV Y+ +PS+IL Y+A
Sbjct: 258 HNLVAKNFVNVATSLEGCVNGYLECVAYDTIPSRILVYEA 297

Malate transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS22|ALMTE_ARATH Aluminum-activated malate transporter 14 OS=Arabidopsis thaliana GN=ALMT14 PE=2 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 117/223 (52%), Gaps = 39/223 (17%)

Query: 35  DDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVS 94
           +++GS   +K +        V+   T ++ I    + +G+ DPR+   A K+G+SL LVS
Sbjct: 13  EEEGSTKNMKTK--------VLELPTKIKKILKNIWKVGKDDPRRVKHALKVGVSLTLVS 64

Query: 95  LVVFFKEPL-SNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGI---- 149
           L+ +  EPL   +   +IWA++TVVVV EFS GATL KG NR LGT  AG L+  I    
Sbjct: 65  LL-YLMEPLFKGIGNSAIWAVMTVVVVLEFSAGATLCKGLNRGLGTLIAGSLAFFIEFVA 123

Query: 150 --------------------AELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTS 189
                               A ++  R +P  Y    Y Y  L   FLLT+ ++ VS   
Sbjct: 124 NDSGKIFRAIFIGAAVFIIGALITYLRFIP--YIKKNYDYGML--IFLLTFNLITVSSYR 179

Query: 190 T-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVV 231
             T  + A  R   IA+G GICL++++ ++P+W+GEDLHK  V
Sbjct: 180 VDTVIKIAHERFYTIAMGVGICLLMSLLVFPIWSGEDLHKSTV 222

Malate transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS23|ALMTD_ARATH Aluminum-activated malate transporter 13 OS=Arabidopsis thaliana GN=ALMT13 PE=2 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 25/196 (12%)

Query: 56  INFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAIL 115
           +N    ++ I    +++G++DPR+ + A K+G++L LVSL+   +     V + ++WA++
Sbjct: 27  LNLPKKMKKILRNLWNVGKEDPRRVIHALKVGVALTLVSLLYLMEPFFEGVGKNALWAVM 86

Query: 116 TVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG--LPG------------- 160
           TVVVV EFS GATL KG NR LGT  AG L+  I  +++  G  L G             
Sbjct: 87  TVVVVLEFSAGATLRKGLNRGLGTLIAGSLAFFIEWVAIHSGKILGGIFIGTSVFTIGSM 146

Query: 161 -------SYYCHQYFYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLV 212
                   Y    Y Y  L   FLLT+ ++ VS     T  + A  RL  I +G GICL 
Sbjct: 147 ITYMRFIPYIKKNYDYGMLV--FLLTFNLITVSSYRVDTVIKIAHERLYTIGMGIGICLF 204

Query: 213 VNVCIYPMWAGEDLHK 228
           +++  +P+W+G+DLHK
Sbjct: 205 MSLLFFPIWSGDDLHK 220

Malate transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|O49696|ALMTC_ARATH Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana GN=ALMT12 PE=2 SV=1

 Score =  117 bits (294), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 112/209 (53%), Gaps = 34/209 (16%)

Query: 49  RWISDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPL-SNVS 107
           +W+   V+     ++ I  + +++G++DPR+ + A K+GLSL LVSL+ +  EPL   + 
Sbjct: 20  KWM---VLEPSEKIKKIPKRLWNVGKEDPRRVIHALKVGLSLTLVSLL-YLMEPLFKGIG 75

Query: 108 QYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGI------------------ 149
             +IWA++TVVVV EFS GATL KG NR LGT  AG L+  I                  
Sbjct: 76  SNAIWAVMTVVVVLEFSAGATLCKGLNRGLGTLIAGSLAFFIEFVANDSGKVLRAIFIGT 135

Query: 150 ------AELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVL 202
                 A  +  R +P  Y    Y Y  +   FLLT+ ++ VS     +    A  R   
Sbjct: 136 AVFIIGAAATYIRFIP--YIKKNYDYGVV--IFLLTFNLITVSSYRVDSVINIAHDRFYT 191

Query: 203 IAVGAGICLVVNVCIYPMWAGEDLHKLVV 231
           IAVG GICL +++ ++P+W+GEDLHK  V
Sbjct: 192 IAVGCGICLFMSLLVFPIWSGEDLHKTTV 220

Malate-sensitive anion transporter permeable to chloride, nitrate, sulfate and malate. Involved in dark-, CO(2)-, abscisic acid- and water-deficient-induced stomatal closure. Belongs to the R-type anion channels.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJE8|ALMT2_ARATH Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana GN=ALMT2 PE=2 SV=2

 Score =  114 bits (285), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 21/180 (11%)

Query: 72  MGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNK 131
           +G++DPR+ V A K+GL+LALVS   +++    N    ++WA++TVVVVFEFSVGATL K
Sbjct: 14  VGKEDPRRVVHAFKVGLALALVSSFYYYQPLYDNFGVNAMWAVMTVVVVFEFSVGATLGK 73

Query: 132 GFNRALGTFSAGGLSLGIAELSVCRG-------------LPGSYYCHQYFYSRLAS---- 174
           G NRA+ T  AGGL +G   L+   G             +  +      F+ R+ +    
Sbjct: 74  GLNRAVATLVAGGLGIGAHHLASLSGPTVEPILLAIFVFVLAALSTFVRFFPRVKARYDY 133

Query: 175 ---FFLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLV 230
               F+LT+ ++ VSG         A  RL  + +G   C+++++ + P+WAG+DLH L+
Sbjct: 134 GVLIFILTFALISVSGFREDEILDLAHKRLSTVIMGGVSCVLISIFVCPVWAGQDLHSLL 193

Malate transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q76LB1|ALMT1_WHEAT Aluminum-activated malate transporter 1 OS=Triticum aestivum GN=ALMT1 PE=1 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 106/182 (58%), Gaps = 26/182 (14%)

Query: 73  GRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSN-VSQYSIWAILTVVVVFEFSVGATLNK 131
            R+DPR+   + K+GL+LALVS VV+F  PL N +   +IWA+LTVVVV E++VGATL+K
Sbjct: 46  AREDPRRVAHSLKVGLALALVS-VVYFVTPLFNGLGVSAIWAVLTVVVVMEYTVGATLSK 104

Query: 132 GFNRALGTFSAGGLSLG---IAELSV-C--RGLPGSYYCHQYFYSRLASF---------- 175
           G NRAL T  AG +++G   +AEL+  C  +G P       +F +  A+F          
Sbjct: 105 GLNRALATLVAGCIAVGAHQLAELAERCGDQGEPIVLTVLVFFVASAATFLRFIPEIKAK 164

Query: 176 -------FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLH 227
                  F+LT+ +V VS        + A  R   IAVG  ICL   V ++P+WAGED+H
Sbjct: 165 YDYGVTIFILTFGLVAVSSYRVEELIQLAHQRFYTIAVGVFICLCTTVFLFPVWAGEDVH 224

Query: 228 KL 229
           KL
Sbjct: 225 KL 226

Malate transporter critical for aluminum tolerance. Permeable to chloride, nitrate, sulfate and malate.

Triticum aestivum (taxid: 4565)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
297737842	1070	unnamed protein product [Vitis vinifera]	0.914	0.241	0.634	5e-92
225423929	583	PREDICTED: aluminum-activated malate tra	0.914	0.442	0.634	5e-92
147841618	559	hypothetical protein VITISV_002161 [Viti	0.914	0.461	0.634	5e-92
255576491	574	conserved hypothetical protein [Ricinus	0.914	0.449	0.638	2e-91
224101695	544	predicted protein [Populus trichocarpa]	0.918	0.476	0.625	1e-90
449435246	571	PREDICTED: aluminum-activated malate tra	0.914	0.451	0.618	1e-88
356574181	553	PREDICTED: aluminum-activated malate tra	0.890	0.453	0.547	3e-70
297851080	567	predicted protein [Arabidopsis lyrata su	0.868	0.432	0.544	1e-68
356498288	554	PREDICTED: aluminum-activated malate tra	0.890	0.453	0.562	2e-68
297734193	549	unnamed protein product [Vitis vinifera]	0.918	0.471	0.503	5e-68

>gi|297737842|emb|CBI27043.3| unnamed protein product [Vitis vinifera]

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 182/287 (63%), Positives = 215/287 (74%), Gaps = 29/287 (10%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           MAAK+GSFRHSF ERSKERLLSRKGYS+FGLNS+D  G ++ +KC CFRW +D +INFW 
Sbjct: 488 MAAKVGSFRHSFVERSKERLLSRKGYSEFGLNSSD--GGDEPVKCLCFRWRTDAIINFWN 545

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
            LQ+   + ++M R DPRK  FAAKMGLSLA+VSL +F KEPL +VSQYSIWAILTVVVV
Sbjct: 546 GLQDTASRLFEMARSDPRKVYFAAKMGLSLAIVSLFIFLKEPLKDVSQYSIWAILTVVVV 605

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG----------LPGSYYCHQY--F 168
           FEFSVGATL+KGFNRALGTFSAGGL+LGIAELS+  G          +  + +C  Y   
Sbjct: 606 FEFSVGATLSKGFNRALGTFSAGGLALGIAELSMLTGALEEVIIIISIFIAGFCASYCKL 665

Query: 169 YSRLASF------FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMW 221
           Y  +  +      FLLT+CIVLVSG TS+ F +TA YRL+ I VGAGICLVVN CI P+W
Sbjct: 666 YPEMKPYEYGFRVFLLTFCIVLVSGSTSSKFLQTALYRLLFIGVGAGICLVVNTCICPIW 725

Query: 222 AGEDLHKLVVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           AGEDLHKLVVK  +  A+ L        +CVEYER+PSKILTYQAS+
Sbjct: 726 AGEDLHKLVVKNFQGVATSLEGCVNEYLQCVEYERIPSKILTYQASD 772

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423929|ref|XP_002278978.1| PREDICTED: aluminum-activated malate transporter 4 [Vitis vinifera]

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 182/287 (63%), Positives = 215/287 (74%), Gaps = 29/287 (10%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           MAAK+GSFRHSF ERSKERLLSRKGYS+FGLNS+D  G ++ +KC CFRW +D +INFW 
Sbjct: 1   MAAKVGSFRHSFVERSKERLLSRKGYSEFGLNSSD--GGDEPVKCLCFRWRTDAIINFWN 58

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
            LQ+   + ++M R DPRK  FAAKMGLSLA+VSL +F KEPL +VSQYSIWAILTVVVV
Sbjct: 59  GLQDTASRLFEMARSDPRKVYFAAKMGLSLAIVSLFIFLKEPLKDVSQYSIWAILTVVVV 118

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG----------LPGSYYCHQY--F 168
           FEFSVGATL+KGFNRALGTFSAGGL+LGIAELS+  G          +  + +C  Y   
Sbjct: 119 FEFSVGATLSKGFNRALGTFSAGGLALGIAELSMLTGALEEVIIIISIFIAGFCASYCKL 178

Query: 169 YSRLASF------FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMW 221
           Y  +  +      FLLT+CIVLVSG TS+ F +TA YRL+ I VGAGICLVVN CI P+W
Sbjct: 179 YPEMKPYEYGFRVFLLTFCIVLVSGSTSSKFLQTALYRLLFIGVGAGICLVVNTCICPIW 238

Query: 222 AGEDLHKLVVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           AGEDLHKLVVK  +  A+ L        +CVEYER+PSKILTYQAS+
Sbjct: 239 AGEDLHKLVVKNFQGVATSLEGCVNEYLQCVEYERIPSKILTYQASD 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841618|emb|CAN68659.1| hypothetical protein VITISV_002161 [Vitis vinifera]

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 182/287 (63%), Positives = 215/287 (74%), Gaps = 29/287 (10%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           MAAK+GSFRHSF ERSKERLLSRKGYS+FGLNS+D  G ++ +KC CFRW +D +INFW 
Sbjct: 1   MAAKVGSFRHSFVERSKERLLSRKGYSEFGLNSSD--GGDEPVKCLCFRWRTDAIINFWN 58

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
            LQ+   + ++M R DPRK  FAAKMGLSLA+VSL +F KEPL +VSQYSIWAILTVVVV
Sbjct: 59  GLQDTASRLFEMARSDPRKVYFAAKMGLSLAIVSLFIFLKEPLKDVSQYSIWAILTVVVV 118

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG----------LPGSYYCHQY--F 168
           FEFSVGATL+KGFNRALGTFSAGGL+LGIAELS+  G          +  + +C  Y   
Sbjct: 119 FEFSVGATLSKGFNRALGTFSAGGLALGIAELSMLTGALEEVIIIISIFIAGFCASYCKL 178

Query: 169 YSRLASF------FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMW 221
           Y  +  +      FLLT+CIVLVSG TS+ F +TA YRL+ I VGAGICLVVN CI P+W
Sbjct: 179 YPEMKPYEYGFRVFLLTFCIVLVSGSTSSKFLQTALYRLLFIGVGAGICLVVNTCICPIW 238

Query: 222 AGEDLHKLVVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           AGEDLHKLVVK  +  A+ L        +CVEYER+PSKILTYQAS+
Sbjct: 239 AGEDLHKLVVKNFQGVATSLEGCVNEYLQCVEYERIPSKILTYQASD 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576491|ref|XP_002529137.1| conserved hypothetical protein [Ricinus communis] gi|223531416|gb|EEF33250.1| conserved hypothetical protein [Ricinus communis]

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 184/288 (63%), Positives = 213/288 (73%), Gaps = 30/288 (10%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           MAAK GSFRHSFAERSKERLLSRKGYSDF LNS+   G    IKCRCFR + D + N   
Sbjct: 1   MAAKTGSFRHSFAERSKERLLSRKGYSDFDLNSSYGGGEGGVIKCRCFRLLCDQINNSRN 60

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
            + +  ++ Y+MGR DPRK  FA KMGLSLALVSLV+F KEPL NV+QYSIWAILTVVVV
Sbjct: 61  AIHDAVVELYNMGRTDPRKVFFAVKMGLSLALVSLVIFLKEPLKNVNQYSIWAILTVVVV 120

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG------------LPGSYYCHQY- 167
           FEFSVGATLNKGFNRALGT SAGGL+LGIAELS+  G            + G  +C  Y 
Sbjct: 121 FEFSVGATLNKGFNRALGTLSAGGLALGIAELSLFAGNFVEVFVVISIFIAG--FCASYI 178

Query: 168 -FYSRLASF------FLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPM 220
             +  + S+      FLLTYCIV+VSG+S+TF  TAFYRL+LIAVGAGI LV+N+C++P+
Sbjct: 179 KLHPSMKSYEYGFRVFLLTYCIVMVSGSSSTFVETAFYRLLLIAVGAGIGLVINICVFPI 238

Query: 221 WAGEDLHKLVVKFSK---ASLLP-----WKCVEYERVPSKILTYQASE 260
           WAGEDLHKLVVK  K   ASL        +CVEYER+PSKILTYQAS+
Sbjct: 239 WAGEDLHKLVVKNFKGVAASLEGCVNGYLQCVEYERIPSKILTYQASD 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101695|ref|XP_002312386.1| predicted protein [Populus trichocarpa] gi|222852206|gb|EEE89753.1| predicted protein [Populus trichocarpa]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 179/286 (62%), Positives = 213/286 (74%), Gaps = 27/286 (9%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           MAAKIGS RHSF ERSKERL+SRK Y DFGLN +++D  E G KCRCF  +SD +++FW 
Sbjct: 1   MAAKIGSLRHSFEERSKERLISRKEYPDFGLNRSENDIEEAG-KCRCFGSLSDRIVSFWN 59

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
            ++N  I+ Y MG+ DPRK +FA KMGLSLALVSLV+F KEPL +VSQYSIWAILTVVVV
Sbjct: 60  GVRNSAIELYKMGQADPRKYLFAVKMGLSLALVSLVIFLKEPLKDVSQYSIWAILTVVVV 119

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPG------SYYCHQYFYSRLAS 174
           FEFSVGATLNKGFNRALGTFSAG L++GIAELS+  G  G      S +   +F S +  
Sbjct: 120 FEFSVGATLNKGFNRALGTFSAGALAIGIAELSLHVGALGEVLLVVSIFIAGFFASYIKL 179

Query: 175 F------------FLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWA 222
           +            FLLTYCIV VSG+S++FF TA YRL+LIAVGA ICL VN+CI+P+WA
Sbjct: 180 YPTMKPYEYGFRVFLLTYCIVTVSGSSSSFFHTAVYRLLLIAVGAAICLAVNICIFPIWA 239

Query: 223 GEDLHKLVVK--FSKASLLP------WKCVEYERVPSKILTYQASE 260
           GEDLHKLVVK     A+ L        +CVEYER+PSKILTY+AS+
Sbjct: 240 GEDLHKLVVKNFNGVANSLEGCVNGYLQCVEYERIPSKILTYEASD 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435246|ref|XP_004135406.1| PREDICTED: aluminum-activated malate transporter 4-like [Cucumis sativus] gi|449493500|ref|XP_004159319.1| PREDICTED: aluminum-activated malate transporter 4-like [Cucumis sativus]

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 210/286 (73%), Gaps = 28/286 (9%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWT 60
           MA K GS R SF ++++E+LLSRKGYSDFGLNS D  GS D +KCRCFR +SD V N W 
Sbjct: 1   MAGKYGSIRQSFLDQNREKLLSRKGYSDFGLNSYD--GSGDNVKCRCFRTLSDAVTNLWK 58

Query: 61  NLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVV 120
             QN  ++ Y+MGR DPRK  FA KMGLSLAL SLV+FF++PL  V QYSIWAILTVVVV
Sbjct: 59  GCQNTSVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSIWAILTVVVV 118

Query: 121 FEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG------------LPG--SYYCHQ 166
           FEFSVGATL+KGFNRA+GT SAGGL+LGIAELS   G            L G  + YC  
Sbjct: 119 FEFSVGATLSKGFNRAIGTLSAGGLALGIAELSASAGAFKEVIIVISIFLAGFSASYCKL 178

Query: 167 YFYSRLASF----FLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWA 222
           Y   ++  +    FLLT+CIVLVSG++++FF TAFYRL+LIAVGA +CLVVN+CI P+W+
Sbjct: 179 YPPMKMYEYGFRVFLLTFCIVLVSGSTSSFFETAFYRLLLIAVGACMCLVVNICILPIWS 238

Query: 223 GEDLHKLVVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           GEDLHKLVVK  K  AS +        +CVEYERV SKILTYQAS+
Sbjct: 239 GEDLHKLVVKNFKNVASSVEGVVNEYLQCVEYERVSSKILTYQASD 284

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574181|ref|XP_003555230.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max]

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/292 (54%), Positives = 195/292 (66%), Gaps = 41/292 (14%)

Query: 1   MAAKIGSFRHSFAERSKERLLSRKGYSDF-GLNSTDDDGSEDGIKCRCF-RWISDGVINF 58
           MAA++GSFRHSF E+SKERLLS+K Y DF G N     G  D    R F   +SD V++F
Sbjct: 1   MAARVGSFRHSFLEKSKERLLSKKEYQDFVGFN-----GDHDASPKRSFLDALSDRVVSF 55

Query: 59  WTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVV 118
               ++   + Y+MGR D RK +FA K GLSLA+VSLV++ +E     S+YS+WAILTVV
Sbjct: 56  HNWSRDFASKLYEMGRSDRRKVLFAVKAGLSLAIVSLVIYIEE--EQFSKYSVWAILTVV 113

Query: 119 VVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG-------------LPGSYYCH 165
           VVFEFS+GATLNKGFNRALGTFSAG L+LGIA+LSV  G             + G  +C 
Sbjct: 114 VVFEFSIGATLNKGFNRALGTFSAGVLALGIAQLSVLVGRAFEELIIVVSIFIAG--FCA 171

Query: 166 QY--FYSRLASF------FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVC 216
            Y   Y  +  +      FLLT+CIVLVSG T   FF TAFYRLVLI +GAG+ L VN+C
Sbjct: 172 SYVKLYPAMKQYEYGFRVFLLTFCIVLVSGRTGLQFFSTAFYRLVLIGIGAGVSLSVNIC 231

Query: 217 IYPMWAGEDLHKLVVK--FSKASLLP------WKCVEYERVPSKILTYQASE 260
           IYP+W+GEDLHKLVVK     A+ L        +CVEYER+PSKIL YQAS+
Sbjct: 232 IYPIWSGEDLHKLVVKNFIGVAASLEGCVNGYLQCVEYERIPSKILVYQASD 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851080|ref|XP_002893421.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339263|gb|EFH69680.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/279 (54%), Positives = 187/279 (67%), Gaps = 34/279 (12%)

Query: 12  FAERSKERLLSRKGYSDFGLNST---DDDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQ 68
            A++++E LLSRKG SDFG N +   DD  S    K RCFR+ SDG+   W  L +I  +
Sbjct: 1   MADQTREALLSRKGCSDFGFNDSSIIDDRRS----KFRCFRFCSDGITASWKALYDIAAK 56

Query: 69  FYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGAT 128
            Y+MGR D RK  F+ KMG++LAL S V++ KEPL + S+Y++WAILTVVVVFE+S+GAT
Sbjct: 57  LYEMGRSDRRKVYFSVKMGMALALCSFVIYLKEPLRDASKYAVWAILTVVVVFEYSIGAT 116

Query: 129 LNKGFNRALGTFSAGGLSLGIAELSVCRG------------LPGSYYCHQYFYSRLASF- 175
           L KGFNRA+GT SAGGL+LGIA LSV  G            + G    +   Y  + S+ 
Sbjct: 117 LVKGFNRAVGTLSAGGLALGIARLSVSAGEFEELIIIISIFIAGFSASYLKLYPAMKSYE 176

Query: 176 -----FLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKL 229
                FLLTYCIVLVSG  S  FF TA+YR +LI VGAGICL VN+ I P+WAGEDLHKL
Sbjct: 177 YAFRVFLLTYCIVLVSGNNSRDFFSTAYYRFLLILVGAGICLGVNIFILPIWAGEDLHKL 236

Query: 230 VVKFSK--ASLLP------WKCVEYERVPSKILTYQASE 260
           VVK  K  A+ L        +CVEYER+PSKILTYQAS+
Sbjct: 237 VVKNFKSVANSLEGCVNGYLQCVEYERIPSKILTYQASD 275

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498288|ref|XP_003517985.1| PREDICTED: aluminum-activated malate transporter 4-like [Glycine max]

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 162/288 (56%), Positives = 187/288 (64%), Gaps = 37/288 (12%)

Query: 2   AAKIGSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTN 61
           AA+  S R  FAERSKERLLSRK +SD  LN T    +           +SD V  F   
Sbjct: 3   AARSVSLRQIFAERSKERLLSRKDFSDLRLNGTTATSASVATP----HALSDRVAQFGEG 58

Query: 62  LQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVF 121
           +   F +  +M R DPRK VFAAK GLSLALVSL ++ KE    +S+YSIWAILTVVVVF
Sbjct: 59  VGRFFRELREMARSDPRKVVFAAKAGLSLALVSLFIYIKE--EQLSKYSIWAILTVVVVF 116

Query: 122 EFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG------------LPGSYYCHQYF- 168
           EFSVGATLNKGFNR+LGT SAGGL+LGIAEL+V  G            + G  +C  Y  
Sbjct: 117 EFSVGATLNKGFNRSLGTISAGGLALGIAELAVLSGKFEELIIVLCIFIAG--FCASYVK 174

Query: 169 -------YSRLASFFLLTYCIVLVSG-TSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPM 220
                  Y      FLLT+CIVLVSG TS  FF TAFYRL+LIA+GAGICL VN+ IYP+
Sbjct: 175 LLPAMKTYEYGFRVFLLTFCIVLVSGRTSREFFSTAFYRLILIAIGAGICLFVNIFIYPI 234

Query: 221 WAGEDLHKLVVK-FS--KASLLP-----WKCVEYERVPSKILTYQASE 260
           W+GEDLHKLVVK F+   ASL        +CV YERVPSKIL YQAS+
Sbjct: 235 WSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVAYERVPSKILVYQASD 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734193|emb|CBI15440.3| unnamed protein product [Vitis vinifera]

 Score =  263 bits (673), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/288 (50%), Positives = 190/288 (65%), Gaps = 29/288 (10%)

Query: 1   MAAKIGSFRHSFAE-RSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFW 59
           M AK+GSFRH+FAE R ++RLLS KGYS+ G    +++       C  FR I     N+W
Sbjct: 1   MTAKLGSFRHTFAEKRERDRLLSCKGYSELGFVHLEENEEATPRWC-SFRSIRHKFANWW 59

Query: 60  TNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVV 119
              +++  + ++MG  DPRK VF+AKMGL+L L++L++F KEP+ ++ +YS+WAILTVVV
Sbjct: 60  KTTKDVAAKGWEMGLSDPRKIVFSAKMGLALMLITLLIFLKEPVKDLGRYSVWAILTVVV 119

Query: 120 VFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG----------LPGSYYCHQY-- 167
           VFEFS+GATL+KGFNR LGTFSAGGL+L +AELS   G          +    +C  Y  
Sbjct: 120 VFEFSIGATLSKGFNRGLGTFSAGGLALAMAELSTLAGKWEEVVIIISIFIIGFCATYAK 179

Query: 168 FYSRLASF------FLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPM 220
            Y  + ++      F LTYC ++VSG  T  F  TA  R +LIA+GAG+CL+VN+CIYP+
Sbjct: 180 LYPTMKAYEYGFRVFTLTYCFIMVSGYRTREFIETAITRFLLIALGAGVCLLVNICIYPI 239

Query: 221 WAGEDLHKLVVK--FSKASLLP------WKCVEYERVPSKILTYQASE 260
           WAGEDLH LV K     A+ L         CVEYERVPSKILTYQAS+
Sbjct: 240 WAGEDLHNLVAKNFMGVANSLEGCVNGYLNCVEYERVPSKILTYQASD 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2095067	598	ALMT9 "aluminum-activated mala	0.578	0.272	0.462	1.3e-55
TAIR|locus:2014119	581	AT1G18420 [Arabidopsis thalian	0.507	0.246	0.427	4.5e-47
TAIR|locus:2031160	548	AT1G25480 "AT1G25480" [Arabido	0.503	0.259	0.530	6.8e-35
TAIR|locus:2053878	538	ALMT6 "AT2G17470" [Arabidopsis	0.535	0.280	0.470	9.2e-27
TAIR|locus:2026935	537	AT1G68600 "AT1G68600" [Arabido	0.535	0.281	0.453	1.2e-23
TAIR|locus:2142295	543	AT5G46610 "AT5G46610" [Arabido	0.333	0.173	0.406	6.1e-22
TAIR|locus:2142290	539	AT5G46600 "AT5G46600" [Arabido	0.358	0.187	0.368	6.3e-22
TAIR|locus:2201791	501	AT1G08440 [Arabidopsis thalian	0.304	0.171	0.441	2.6e-21
TAIR|locus:2141065	560	ALMT12 "aluminum-activated, ma	0.287	0.144	0.433	1.7e-20
TAIR|locus:2039654	506	AT2G27240 [Arabidopsis thalian	0.315	0.175	0.393	2.8e-19

TAIR|locus:2095067 ALMT9 "aluminum-activated malate transporter 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 80/173 (46%), Positives = 111/173 (64%)

Query:     1 MAAKIGSFRHSFAERSKERLLSRKGYSDF---GLNSTD-----DDGSEDGIKCRCFRW-I 51
             MAAK GSFRH   E+ +ERLLS  G+SDF    + S D     + G    + C C    +
Sbjct:     1 MAAKQGSFRHGILEK-RERLLSNNGFSDFRFTDIESNDLLENENCGRRTRLCCCCSCGNL 59

Query:    52 SDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPLSNVSQYSI 111
             S+ +   + + +++  + ++MG  DPRK VF+AK+G          F++EP  ++S+YS+
Sbjct:    60 SEKISGVYDDAKDVARKAWEMGVSDPRKIVFSAKIGLALTIVALLIFYQEPNPDLSRYSV 119

Query:   112 WAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYC 164
             WAILTVVVVFEF++GATL+KGFNRALGT SAGGL+LG+AELS   G     +C
Sbjct:   120 WAILTVVVVFEFTIGATLSKGFNRALGTLSAGGLALGMAELSTLFGDWEEIFC 172

GO:0010044 "response to aluminum ion" evidence=IEA

GO:0005253 "anion channel activity" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0015743 "malate transport" evidence=IMP

TAIR|locus:2014119 AT1G18420 [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
 Identities = 65/152 (42%), Positives = 92/152 (60%)

Query:     6 GSFRHSFAERSKERLLSRKGYSDFGLNSTDDDGSEDGIKCRCFRWISDGVINFWTNLQNI 65
             GSFR S  +R    +L  +GYS    N  DDD  +  ++C  + + SD +      L+++
Sbjct:    27 GSFRQSMRDRL---ILQSRGYS----NVNDDD--KTSVRCCSYSYFSDKITGVVKKLKDV 77

Query:    66 FIQFYDMGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPLSNVSQYSIWAILTVVVVFEFSV 125
              +  ++MG  DPRK +F+AKMG          FFK P   +S + +WAILTVVV+FEFS+
Sbjct:    78 LVTAWEMGTADPRKMIFSAKMGLALTLTSILIFFKIPGLELSGHYLWAILTVVVIFEFSI 137

Query:   126 GATLNKGFNRALGTFSAGGLSLGIAELSVCRG 157
             GAT +KG NR LGT SAGGL+LG++ +S   G
Sbjct:   138 GATFSKGCNRGLGTLSAGGLALGMSWISEMTG 169

GO:0010044 "response to aluminum ion" evidence=IEA

TAIR|locus:2031160 AT1G25480 "AT1G25480" [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 6.8e-35, P = 6.8e-35
 Identities = 78/147 (53%), Positives = 99/147 (67%)

Query:    13 AERSKERLLSRKGYSDFGLNSTD--DDGSEDGIKCRCFRWISDGVINFWTNLQNIFIQFY 70
             A++++E  LSRK  SDFG N ++  DD      K RCFR+ SDG+   W  L +I  + Y
Sbjct:     2 ADQTREAFLSRKACSDFGFNDSNIIDDRRS---KFRCFRFCSDGITASWKALYDIGAKLY 58

Query:    71 DMGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLN 130
             +MGR D RK  F+ KMG          + KEPL + S+Y++WAILTVVVVFE+S+GATL 
Sbjct:    59 EMGRSDRRKVYFSVKMGMALALCSFVIYLKEPLRDASKYAVWAILTVVVVFEYSIGATLV 118

Query:   131 KGFNRALGTFSAGGLSLGIAELSVCRG 157
             KGFNRA+GT SAGGL+LGIA LSV  G
Sbjct:   119 KGFNRAIGTLSAGGLALGIARLSVSAG 145

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0010044 "response to aluminum ion" evidence=IEA

TAIR|locus:2053878 ALMT6 "AT2G17470" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
 Identities = 81/172 (47%), Positives = 100/172 (58%)

Query:   106 VSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSV--CRGLPG--- 160
             V +YS+ A  T+V  F  ++G T++ G   ALG      LS    +  +  C  L G   
Sbjct:    80 VFEYSVGA--TLVKGFNRAIG-TVSAG-GLALGIARLSVLSRDFEQTIIITCIFLAGFIA 135

Query:   161 SYY-CHQYF--YSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVC 216
             SY   H     Y      FLLT+CIVLVSG +T  FF TA+YR + I VGA  CLVVN+ 
Sbjct:   136 SYSKLHPAMKPYEYAFRVFLLTFCIVLVSGNNTGDFFSTAYYRFLFIVVGATTCLVVNIF 195

Query:   217 IYPMWAGEDLHKLVVK-F-SKASLLPW------KCVEYERVPSKILTYQASE 260
             I+P+WAGEDLHKLV   F S A+ L        +CVEYERVPSKILTYQ S+
Sbjct:   196 IFPIWAGEDLHKLVANNFKSVANSLEGCVNGYLQCVEYERVPSKILTYQTSD 247

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0015140 "malate transmembrane transporter activity" evidence=IDA

GO:0071423 "malate transmembrane transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2026935 AT1G68600 "AT1G68600" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 78/172 (45%), Positives = 99/172 (57%)

Query:   106 VSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAE--LSVCRGLPG--- 160
             + +Y + A  T+V  F  ++G  L  G   ALG      L+    E  + +C  L G   
Sbjct:    97 IFEYYVGA--TLVKGFNRALGTMLAGGL--ALGVAQLSVLAGEFEEVIIVICIFLAGFGA 152

Query:   161 SY---YCHQYFYSRLASFFLLTYCIVLVSGT-STTFFRTAFYRLVLIAVGAGICLVVNVC 216
             SY   Y     Y      F LTYCIVLVSG  S  F  TA+YR++LI +GA ICL+VNV 
Sbjct:   153 SYLKLYASMKPYEYAFRVFKLTYCIVLVSGNNSRDFLSTAYYRILLIGLGATICLLVNVF 212

Query:   217 IYPMWAGEDLHKLVVKFSK--ASLLPW------KCVEYERVPSKILTYQASE 260
             ++P+WAGEDLHKLV K  K  A+ L        +CVEYER+PSKILTYQAS+
Sbjct:   213 LFPIWAGEDLHKLVAKNFKNVANSLEGCVNGYLQCVEYERIPSKILTYQASD 264

GO:0005575 "cellular_component" evidence=ND

GO:0010044 "response to aluminum ion" evidence=IEA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

TAIR|locus:2142295 AT5G46610 "AT5G46610" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
 Identities = 39/96 (40%), Positives = 53/96 (55%)

Query:    55 VINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPL-SNVSQYSIWA 113
             V+   T ++ I    + +G+ DPR+   A K+G          +  EPL   +   +IWA
Sbjct:    25 VLELPTKIKKILKNIWKVGKDDPRRVKHALKVGVSLTLVSLL-YLMEPLFKGIGNSAIWA 83

Query:   114 ILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGI 149
             ++TVVVV EFS GATL KG NR LGT  AG L+  I
Sbjct:    84 VMTVVVVLEFSAGATLCKGLNRGLGTLIAGSLAFFI 119

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0010044 "response to aluminum ion" evidence=IEA

TAIR|locus:2142290 AT5G46600 "AT5G46600" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
 Identities = 38/103 (36%), Positives = 59/103 (57%)

Query:    56 INFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPL-SNVSQYSIWAI 114
             +N    ++ I    +++G++DPR+ + A K+G          +  EP    V + ++WA+
Sbjct:    27 LNLPKKMKKILRNLWNVGKEDPRRVIHALKVGVALTLVSLL-YLMEPFFEGVGKNALWAV 85

Query:   115 LTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG 157
             +TVVVV EFS GATL KG NR LGT  AG L+  I  +++  G
Sbjct:    86 MTVVVVLEFSAGATLRKGLNRGLGTLIAGSLAFFIEWVAIHSG 128

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0010044 "response to aluminum ion" evidence=IEA

TAIR|locus:2201791 AT1G08440 [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
 Identities = 38/86 (44%), Positives = 53/86 (61%)

Query:    72 MGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNK 131
             +G++DPR+ V A K+G          +++    N    ++WA++TVVVVFEFSVGATL K
Sbjct:    14 VGKEDPRRVVHAFKVGLALALVSSFYYYQPLYDNFGVNAMWAVMTVVVVFEFSVGATLGK 73

Query:   132 GFNRALGTFSAGGLSLGIAELSVCRG 157
             G NRA+ T  AGGL +G   L+   G
Sbjct:    74 GLNRAVATLVAGGLGIGAHHLASLSG 99

GO:0005886 "plasma membrane" evidence=ISM

GO:0010044 "response to aluminum ion" evidence=IEA

TAIR|locus:2141065 ALMT12 "aluminum-activated, malate transporter 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 36/83 (43%), Positives = 51/83 (61%)

Query:    68 QFYDMGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPL-SNVSQYSIWAILTVVVVFEFSVG 126
             + +++G++DPR+ + A K+G          +  EPL   +   +IWA++TVVVV EFS G
Sbjct:    36 RLWNVGKEDPRRVIHALKVGLSLTLVSLL-YLMEPLFKGIGSNAIWAVMTVVVVLEFSAG 94

Query:   127 ATLNKGFNRALGTFSAGGLSLGI 149
             ATL KG NR LGT  AG L+  I
Sbjct:    95 ATLCKGLNRGLGTLIAGSLAFFI 117

GO:0010044 "response to aluminum ion" evidence=IEA

GO:0008509 "anion transmembrane transporter activity" evidence=IDA

GO:0010118 "stomatal movement" evidence=IMP

GO:0012505 "endomembrane system" evidence=IDA

TAIR|locus:2039654 AT2G27240 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
 Identities = 35/89 (39%), Positives = 51/89 (57%)

Query:    72 MGRKDPRKAVFAAKMGXXXXXXXXXXFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNK 131
             + ++DPR+ V + K+G          +++    +    ++WA++TVVVVFEFSVGATL K
Sbjct:    14 VAKEDPRRVVHSFKVGLVLALVSSFYYYQPLYDSFGVNAMWAVMTVVVVFEFSVGATLGK 73

Query:   132 GFNRALGTFSAGGLSLGIAELSVCRGLPG 160
             G NR   T  AGGL +G   L+   G  G
Sbjct:    74 GLNRVAATLFAGGLGIGAHHLASMSGPTG 102

GO:0005886 "plasma membrane" evidence=ISM

GO:0010044 "response to aluminum ion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
pfam11744	399	pfam11744, ALMT, Aluminium activated malate transp	2e-64
pfam04632	649	pfam04632, FUSC, Fusaric acid resistance protein f	5e-05
pfam13515	125	pfam13515, FUSC_2, Fusaric acid resistance protein	9e-05
COG1289	674	COG1289, COG1289, Predicted membrane protein [Func	0.004

>gnl|CDD|221201 pfam11744, ALMT, Aluminium activated malate transporter

 Score =  206 bits (527), Expect = 2e-64
 Identities = 94/220 (42%), Positives = 125/220 (56%), Gaps = 31/220 (14%)

Query: 70  YDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATL 129
           +  G+ DPR+ + + K+GL+L LVSL+ F +     +   ++WAILTVVVVFEFSVGATL
Sbjct: 1   WKFGKDDPRRVIHSLKVGLALTLVSLLYFMRPLYDGLGVNAVWAILTVVVVFEFSVGATL 60

Query: 130 NKGFNRALGTFSAGGLSLGIAELSVCRGLPGSYY---CHQYFYSRLASF----------- 175
           +KG NR L T  AGGL+ G+  L+   G  G         +    LA+F           
Sbjct: 61  SKGLNRGLATLIAGGLAFGVHHLASSSGKIGEPIVIGVSVFLIGFLATFSRFHPAIKAYD 120

Query: 176 -----FLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKL 229
                FLLT+C+V VSG  T  F  TA  R + IA+GAGICL+V++ I+P+WAGEDLHKL
Sbjct: 121 YGFRVFLLTFCLVTVSGYRTGEFIETAHQRFLTIAIGAGICLIVSIFIFPIWAGEDLHKL 180

Query: 230 VVK--FSKASLLP------WKCVEYERVPSKILTYQASEF 261
           V K     A+ L       ++ VEYER    IL Y+    
Sbjct: 181 VAKNFEKLANSLEGCVDEYFEEVEYER---SILEYEDPSD 217

Length = 399

>gnl|CDD|218184 pfam04632, FUSC, Fusaric acid resistance protein family

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 35/143 (24%), Positives = 52/143 (36%), Gaps = 39/143 (27%)

Query: 112 WAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSV----------------C 155
           WA++TV +V +   GA L+K F R LGT      ++ +  L V                C
Sbjct: 29  WAMMTVFIVSQPLSGAVLSKSFYRVLGTLVGAAAAVALVALFVQAPLLFLLALALWIGLC 88

Query: 156 RGL------PGSYYCHQYFYSRLASFFLL---TYCIVLVSGTST--TFFRTAFYRLVLIA 204
             L        SY             F+L   T  I+ +   +   T F  A  R+  IA
Sbjct: 89  TALSLLDRNFRSY------------AFVLAGYTAAIIALPAVTDPETIFDIAVARVSEIA 136

Query: 205 VGAGICLVVNVCIYPMWAGEDLH 227
           +G     +V+   +P   G  L 
Sbjct: 137 LGILCAGLVSALFFPRSVGPALR 159

This family includes a conserved region found in two proteins associated with fusaric acid resistance,from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins. Length = 649

>gnl|CDD|222189 pfam13515, FUSC_2, Fusaric acid resistance protein-like

 Score = 41.0 bits (97), Expect = 9e-05
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 108 QYSIWAILTVVVVFEFSVGATLNKGFNRALGTF-----SAGGLSLGIAELSVCRGLPGSY 162
            +  WA LT V+V + ++GAT+ +   R LGT       A  L L  + L +   L    
Sbjct: 12  PHGYWAPLTAVIVLQPTLGATVRRAKQRILGTVLGVLLGALLLYLLPSPLQLILLLALLG 71

Query: 163 YCHQYFYSR--LASFFLLTYCIVLVSGTSTTF-FRTAFYRLVLIAVGAGICLVV 213
           +   YF  R    +   +T   +L++  +       A  RL+   +G  I L+V
Sbjct: 72  FLAFYFLGRNYALATIFITPLALLLASLAGGGPIELALLRLLDTLIGILIALLV 125

Length = 125

>gnl|CDD|224208 COG1289, COG1289, Predicted membrane protein [Function unknown]

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 28/145 (19%), Positives = 44/145 (30%), Gaps = 28/145 (19%)

Query: 74  RKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQY--SIWAILTVVVVFE-FSVGATLN 130
           R +      A +  L+L L                +    W +LT  VV +  + GAT  
Sbjct: 349 RLNSPALRHALRTALALLLGYAFWLA-------LGWPHGYWILLTAAVVCQPNAYGATRQ 401

Query: 131 KGFNRALGTFSAGGLSLGIAELSVCRGLPGSYYCHQYFYSRLASFFLLTYCIVLVSGTST 190
           +   R LGT     L L +                      +    LL     L+     
Sbjct: 402 RARQRILGTLLGLLLGLLVL---------------LLLLPLIPGLLLLLLLAALLFA--- 443

Query: 191 TFFRTAFYRLVLIAVGAGICLVVNV 215
              R A YRL  + +   +  +V +
Sbjct: 444 AGIRLAKYRLATLGITLLVLFLVGL 468

Length = 674

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
PF11744	406	ALMT: Aluminium activated malate transporter; Inte	100.0
KOG4711	625	consensus Predicted membrane protein [General func	99.97
TIGR01667	701	YCCS_YHJK integral membrane protein, YccS/YhfK fam	99.96
TIGR01666	704	YCCS hypothetical membrane protein, TIGR01666. Thi	99.96
PF04632	650	FUSC: Fusaric acid resistance protein family; Inte	99.92
PRK10631	652	p-hydroxybenzoic acid efflux subunit AaeB; Provisi	99.9
PRK11427	683	multidrug efflux system protein MdtO; Provisional	99.86
COG1289	674	Predicted membrane protein [Function unknown]	99.78
PF13515	128	FUSC_2: Fusaric acid resistance protein-like	99.69
PRK11427	683	multidrug efflux system protein MdtO; Provisional	99.53
PF06081	141	DUF939: Bacterial protein of unknown function (DUF	99.52
COG4129	332	Predicted membrane protein [Function unknown]	99.47
COG1289	674	Predicted membrane protein [Function unknown]	99.36
PF04632	650	FUSC: Fusaric acid resistance protein family; Inte	98.59
PF10337	459	DUF2422: Protein of unknown function (DUF2422); In	98.16
TIGR01666	704	YCCS hypothetical membrane protein, TIGR01666. Thi	97.63
PF12805	284	FUSC-like: FUSC-like inner membrane protein yccS	97.26
TIGR01667	701	YCCS_YHJK integral membrane protein, YccS/YhfK fam	97.05
PRK10631	652	p-hydroxybenzoic acid efflux subunit AaeB; Provisi	95.98
PF11168	140	DUF2955: Protein of unknown function (DUF2955); In	95.34
COG4129	332	Predicted membrane protein [Function unknown]	84.51

>PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana []

Probab=100.00  E-value=3.6e-39  Score=310.57  Aligned_cols=178  Identities=44%  Similarity=0.757  Sum_probs=162.3

Q ss_pred             HhcccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHH
Q 048543           70 YDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGI  149 (282)
Q Consensus        70 w~~~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l  149 (282)
                      |+++++||+++.|++|+|+|++++++++|..++|.+++.|++||+|||++||+|++|+|+.||+||++||++||++|+++
T Consensus         1 w~~g~~d~rr~~~~lkvglal~lvsl~~~~~~~~~~~~~~~~WavlTVvvvfe~tvGatl~KG~nR~lGTl~aG~La~~~   80 (406)
T PF11744_consen    1 WKFGKDDPRRVIHSLKVGLALTLVSLLYFVGPLYDGFGQNAMWAVLTVVVVFEPTVGATLSKGLNRGLGTLLAGILAFGV   80 (406)
T ss_pred             CcccccCcchhhhhHHHHHHHHHHHHHHHhhhhhhhhhhcchHHHhhhHhhccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCch-hHhH------H----HHhc---------chhhHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHH
Q 048543          150 AELSVCRGL-PGSY------Y----CHQY---------FYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAG  208 (282)
Q Consensus       150 ~~l~~~~g~-~~~v------f----~~t~---------~~~Y~~~v~~lT~~lV~v~~~~~-~~~~~a~~Ril~i~IG~~  208 (282)
                      .+++...|+ ...+      |    +++|         +|+|++.+|++||++|++++|++ +.+.++..|++.|++|++
T Consensus        81 ~~la~~~g~~~~~~~i~~~vFi~~~~atf~r~~P~~k~rydYg~~Vf~LTf~lV~vs~yr~~~~~~~A~~R~~~I~iGv~  160 (406)
T PF11744_consen   81 SWLASLSGDPGEPIVIGISVFIIGFIATFVRFIPKIKARYDYGGLVFILTFCLVAVSGYRTDEFLMLAVWRLLTIVIGVA  160 (406)
T ss_pred             HHHHHhcCccchhHHHHHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHhheeecCCcchHHHHHHHHHHHHHHHHH
Confidence            999877665 2111      2    3444         49999999999999999999999 999999999999999999


Q ss_pred             HHHHHhhcccCcchhHHHHHHHHHHHHHhhh--------hHHHhhhc
Q 048543          209 ICLVVNVCIYPMWAGEDLHKLVVKFSKASLL--------PWKCVEYE  247 (282)
Q Consensus       209 ial~v~~li~P~~a~~~L~~~va~~l~~~~~--------Yl~~v~~~  247 (282)
                      ++++++.+|||.|++++||+.+++++++-.+        |+++.+++
T Consensus       161 i~l~vsi~IfPvwAg~~Lh~~~a~~leklA~~le~~v~~y~~~~~~~  207 (406)
T PF11744_consen  161 ICLLVSIFIFPVWAGEDLHKLTAKNLEKLANSLEGCVEEYFKCSEDE  207 (406)
T ss_pred             HHHHHHHheeechhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhc
Confidence            9999999999999999999999999999333        77766655

; GO: 0010044 response to aluminum ion

>KOG4711 consensus Predicted membrane protein [General function prediction only]

Probab=99.97  E-value=3.5e-32  Score=272.03  Aligned_cols=218  Identities=42%  Similarity=0.703  Sum_probs=190.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHH
Q 048543           52 SDGVINFWTNLQNIFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNK  131 (282)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~w~~~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k  131 (282)
                      .++....-.|+.+..++.|+++..||+++.|++|++++++|++.+++..+++.+++.++.|++|||++|+++++|+|+.|
T Consensus        65 ~~k~~~~~~kv~~~~~~~~~~g~~dprrviha~KvglaltL~S~~y~~~~~~~~ig~~~~wai~tvvvv~e~svgatl~k  144 (625)
T KOG4711|consen   65 TDKELELSAKVSKIARNLWEVGKEDPRRVIHAFKVGLALTLVSFLYFMKPLYKGIGVNALWAILTVVVVFEFSVGATLSK  144 (625)
T ss_pred             cccccchHHHHHHHHhhhhhcCCCChhhhhhhhhccchhhhhhheeeccccccccchhhhheeeEEEEEEEeccchHHHH
Confidence            35566667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHHHHhhcCch-hHhH------H----HHhc--------chhhHHHHHHHHHHHHHHhcCCh-h
Q 048543          132 GFNRALGTFSAGGLSLGIAELSVCRGL-PGSY------Y----CHQY--------FYSRLASFFLLTYCIVLVSGTST-T  191 (282)
Q Consensus       132 ~~~RilGTllG~~lg~~l~~l~~~~g~-~~~v------f----~~t~--------~~~Y~~~v~~lT~~lV~v~~~~~-~  191 (282)
                      +++|.+||+.+|.+|+.+.+++...|+ ...+      |    .++|        +|+|+..+|.+||+++.++++++ +
T Consensus       145 glnr~v~tL~ag~l~l~~~~la~~~g~~~~~i~~~~~vF~~~~~~ty~~f~p~iK~y~y~~lIf~ltf~l~~vs~~r~~~  224 (625)
T KOG4711|consen  145 GLNRAVGTLSAGGLALGIERLAEISGKDNESIFIGITVFIAGAKATYSLFFPYIKAYEYGFLIFILTFCLVEVSGYRSDY  224 (625)
T ss_pred             hHHHHHHHhhhhhhhhhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhchhhhccchhhhHHHHHhhhheecccchhH
Confidence            999999999999999999988777763 2222      2    2333        78999999999999999999998 9


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHHHHHHHHHHHhhh--------------hHHHhhhccCCCCcccch
Q 048543          192 FFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLL--------------PWKCVEYERVPSKILTYQ  257 (282)
Q Consensus       192 ~~~~a~~Ril~i~IG~~ial~v~~li~P~~a~~~L~~~va~~l~~~~~--------------Yl~~v~~~~~~~~~l~y~  257 (282)
                      +++++..|++.|.+|..+|++++.|+||.|+|++||+.++++++....              |..|+++...+++.++||
T Consensus       225 ~~~~a~~Rl~~i~~g~~vcliis~f~~PiwAgedlh~l~~~n~~~~a~sleg~~~~~~~~~~~y~~~~~i~~~s~~~~~~  304 (625)
T KOG4711|consen  225 FLELALQRLLLIVIGGGVCLIISRFIFPIWAGEDLHKLDSKNFKNLASSLEGRKFTASCFNGEYFCVEKIEILSIPTFYK  304 (625)
T ss_pred             HHHHHHHHHHHHhhCcceeEEEEEEEeeccchhhhhhhhhhhhhhhhhhhcchhhhhhhhcchheeehhhhhcchhhhhh
Confidence            999999999999999999999999999999999999999999988333              445566778899999998


Q ss_pred             hhH---HHhhhHHHH
Q 048543          258 ASE---FLMTQRIVV  269 (282)
Q Consensus       258 ~~~---~~~~q~~~~  269 (282)
                      +++   ....++++.
T Consensus       305 s~~~~~~~~Gy~svl  319 (625)
T KOG4711|consen  305 SAAWYPLYNGYWSVL  319 (625)
T ss_pred             hcchhhhhcchhHHh
Confidence            531   233555553

>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family

Probab=99.96  E-value=2.6e-27  Score=242.53  Aligned_cols=189  Identities=15%  Similarity=0.131  Sum_probs=152.6

Q ss_pred             HHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHH
Q 048543           65 IFIQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGG  144 (282)
Q Consensus        65 ~~~~~w~~~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~  144 (282)
                      ...++.+....++..++||+|++++++++..++...+.     +||||+++|+++|+||++|+|+.|+.+|++||++|++
T Consensus       368 ~~~~l~~~l~~~S~~fRhAlR~ala~~~a~~i~~~l~l-----~~gyWi~lTv~~V~qP~~~~T~~R~~~Ri~GTl~G~l  442 (701)
T TIGR01667       368 ILPRLKSHLTPESPLFRHAVRLSLVVMLGYAILMGTAL-----HLGYWILLTTLFVCQPNYGATRLRLVQRIIGTVVGLV  442 (701)
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-----CcchHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHH
Confidence            34455555567777899999999999999888876553     7999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCchhHhH--H---H-Hhc-chhhHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHHHHHhhc
Q 048543          145 LSLGIAELSVCRGLPGSY--Y---C-HQY-FYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVC  216 (282)
Q Consensus       145 lg~~l~~l~~~~g~~~~v--f---~-~t~-~~~Y~~~v~~lT~~lV~v~~~~~-~~~~~a~~Ril~i~IG~~ial~v~~l  216 (282)
                      +|+++..+.+.+.....+  +   + ..+ +.+|++.++++|..+++...... +.++++..|++||+||++++++++++
T Consensus       443 lg~~l~~l~p~~~~~l~l~v~~~~~~~~~~~~~Y~~a~~fiT~~vll~~~l~~~~~~~~a~~Rl~DTliG~~iA~~~~~l  522 (701)
T TIGR01667       443 IGVALHFLIPSLEGQLTLMVITGVAFFAFRSKNYGWATVFITLLVLLCFNLLGLDGEQYILPRLIDTLIGCLIAWGAVSY  522 (701)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988775533211111  1   1 112 68999999999987776654444 66788999999999999999999999


Q ss_pred             ccCcchhHHHHHHHHHHHHHhhhhHHHhh--hccCCCCcccchh
Q 048543          217 IYPMWAGEDLHKLVVKFSKASLLPWKCVE--YERVPSKILTYQA  258 (282)
Q Consensus       217 i~P~~a~~~L~~~va~~l~~~~~Yl~~v~--~~~~~~~~l~y~~  258 (282)
                      +||.|+++++++.+++.++.+.+|++.+.  +...++..+.|+.
T Consensus       523 lwP~w~~~~l~~~~~~al~a~~~yl~~il~~~~~~~~~~~~yr~  566 (701)
T TIGR01667       523 LWPDWQSRLLRKMLHDALEANQRYLRLILSQYPQGKPDDLAYRI  566 (701)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHH
Confidence            99999999999999999999999999885  4444455566653

TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane

>TIGR01666 YCCS hypothetical membrane protein, TIGR01666

Probab=99.96  E-value=3.1e-27  Score=241.67  Aligned_cols=203  Identities=15%  Similarity=0.136  Sum_probs=160.0

Q ss_pred             HHHHhcccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHH
Q 048543           67 IQFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLS  146 (282)
Q Consensus        67 ~~~w~~~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg  146 (282)
                      +++.+....|+..++||+|++++++++..++...+.     +||||+++|+++|+||++|+|+.|+.+|++||++|+++|
T Consensus       368 ~~l~~~l~~~S~~fRhAlRlalal~~a~~i~~~l~l-----~~gyWi~LTv~~V~qP~~~~T~~R~~~Ri~GTllG~~lg  442 (704)
T TIGR01666       368 ARIFSHFTFESPLFRHAVRLSIVLFLGYAIIQFFGF-----NLGYWILLTTLFVCQPNYSATKVRLRQRIIGTLLGVVIG  442 (704)
T ss_pred             HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHhCC-----CCCchHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455566777899999999999999888876653     799999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCchhHhH--H----HHhc-chhhHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 048543          147 LGIAELSVCRGLPGSY--Y----CHQY-FYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYP  219 (282)
Q Consensus       147 ~~l~~l~~~~g~~~~v--f----~~t~-~~~Y~~~v~~lT~~lV~v~~~~~~~~~~a~~Ril~i~IG~~ial~v~~li~P  219 (282)
                      .++.++.+.......+  +    +..+ ..+|+..++++|..+++......+.++++..|++||+||+++++++++++||
T Consensus       443 ~~ll~l~p~~~~~l~liv~~~~l~~~~~~~~Y~~a~~fiT~~vll~~~l~g~~~~~~~~Rl~dTlIG~~iAl~a~~li~P  522 (704)
T TIGR01666       443 SPLLYFNPSLELQLVLVVLTGVLFFAFRSNNYSFATFFITLLVLLCFNVLGEGAAVLLPRLLDTLIGCAIAWAAVSYIWP  522 (704)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            9998885543111111  1    1122 7899999888999887765443356688999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHhhhhHHHhh--hccCCCCcccchhh----HHHhhhHHHHHHHHH
Q 048543          220 MWAGEDLHKLVVKFSKASLLPWKCVE--YERVPSKILTYQAS----EFLMTQRIVVIDRLY  274 (282)
Q Consensus       220 ~~a~~~L~~~va~~l~~~~~Yl~~v~--~~~~~~~~l~y~~~----~~~~~q~~~~~~r~~  274 (282)
                      .|+++++++.+++.++++.+|++.+.  +...++..+.|+..    -...++.+.+++|..
T Consensus       523 ~w~~~~l~~~~~~al~a~~~Yl~~vl~~~~~g~~~~~~yr~aRR~a~~~~a~l~~~~~~m~  583 (704)
T TIGR01666       523 DWQYLQLDKVSHQALRANAVYLLHIISQYQFGKSDDLKYRIARRNAHNYDAALSTTVSNMN  583 (704)
T ss_pred             chHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999985  44455566666432    224555555655543

This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.

>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate

Probab=99.92  E-value=9.2e-24  Score=213.68  Aligned_cols=167  Identities=22%  Similarity=0.234  Sum_probs=145.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCch
Q 048543           79 KAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGL  158 (282)
Q Consensus        79 ~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g~  158 (282)
                      ++.|++|+++|+.++.++++..++     ++|||+++||++|+||+.|++++|+++|++||++|+++|++++.++.+. +
T Consensus         1 ~~~~alr~~lA~~lAl~ia~~l~l-----~~p~WA~~tv~iV~qp~~G~~~~k~~~R~~GT~iGa~~~~~lv~~~~~~-p   74 (650)
T PF04632_consen    1 RLRFALRTALAAMLALYIAFWLQL-----PHPYWAAMTVFIVSQPSSGASLSKGLYRLIGTLIGAAAGLLLVALFPQS-P   74 (650)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCC-----CCcHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-H
Confidence            367999999999999999887664     8999999999999999999999999999999999999999998876655 3


Q ss_pred             hHhH-------HHHhc-------chhhHHHHHHHHHHHHHHhcCCh--hHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 048543          159 PGSY-------YCHQY-------FYSRLASFFLLTYCIVLVSGTST--TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWA  222 (282)
Q Consensus       159 ~~~v-------f~~t~-------~~~Y~~~v~~lT~~lV~v~~~~~--~~~~~a~~Ril~i~IG~~ial~v~~li~P~~a  222 (282)
                      +..+       +++.|       .+.|++.+..+|.++|.+.+..+  +.++++++|+.+|+||++++.+|+.++||.+.
T Consensus        75 ~l~~~~lal~i~~c~~~~~~~~~~~~y~~~lag~T~~iv~~~~~~~p~~~f~~a~~R~~ei~iGi~~a~~v~~l~~P~~~  154 (650)
T PF04632_consen   75 LLFLLALALWIGLCLYLSLLDRNFRSYAFMLAGYTAAIVALPAVGNPEQVFDLALWRVLEILIGILCATLVSMLFFPQRA  154 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhcccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccH
Confidence            4332       11222       68999999999999999887655  78999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhHHHhhhccCCC
Q 048543          223 GEDLHKLVVKFSKASLLPWKCVEYERVPS  251 (282)
Q Consensus       223 ~~~L~~~va~~l~~~~~Yl~~v~~~~~~~  251 (282)
                      ++.+++.+++.++...++++....++.++
T Consensus       155 ~~~l~~~l~~~l~~~~~~~~~~l~~~~~~  183 (650)
T PF04632_consen  155 RRQLRRRLAQRLADLARWLAALLDGDPDP  183 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            99999999999999999888876554443

It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane

>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional

Probab=99.90  E-value=5.1e-22  Score=201.45  Aligned_cols=166  Identities=19%  Similarity=0.169  Sum_probs=145.4

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhh---------ccChhhHHHHHHhhhhHHHHHHH
Q 048543           74 RKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVF---------EFSVGATLNKGFNRALGTFSAGG  144 (282)
Q Consensus        74 ~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~---------qps~GaT~~k~~~RilGTllG~~  144 (282)
                      .+++++++|++|+++|+.++..+++..++     ++||||.+||++|+         ||..|++++|+++|++||++|++
T Consensus         3 ~p~~~~~~falk~~lA~~LAL~ia~~l~L-----~~P~WA~~Tv~iv~~~~~~~~g~qp~~G~v~~K~~~Ri~GTliGa~   77 (652)
T PRK10631          3 SIANQRLRFAVKLAFAIVLALFVGFHFQL-----ETPRWAVLTAAIVAAGPAFAAGGEPFSGAIRYRGMLRIIGTFIGCI   77 (652)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCccHHHHHHHHHHcccccccccCCccchHHHHHHHHHHHHHHHHH
Confidence            45678899999999999999999887654     79999999999999         99999999999999999999999


Q ss_pred             HHHHHHHHhhcCchhHhH--------HHHh---c---chhhHHHHHHHHHHHHHHhcCCh--hHHHHHHHHHHHHHHHHH
Q 048543          145 LSLGIAELSVCRGLPGSY--------YCHQ---Y---FYSRLASFFLLTYCIVLVSGTST--TFFRTAFYRLVLIAVGAG  208 (282)
Q Consensus       145 lg~~l~~l~~~~g~~~~v--------f~~t---~---~~~Y~~~v~~lT~~lV~v~~~~~--~~~~~a~~Ril~i~IG~~  208 (282)
                      .|+++..++.+. ++...        +|..   +   ++.|++.+...|.++|.++...+  +.+++++.|+.+|+||++
T Consensus        78 ~~l~l~~~f~~~-p~l~~l~l~lWig~c~~~s~l~r~~~sY~~~LaGyTa~iI~~~~~~~p~~~f~~A~~R~~Ei~iGi~  156 (652)
T PRK10631         78 AALVIIIATIRA-PLLMILLCCIWAGFCTWISSLVRVENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIV  156 (652)
T ss_pred             HHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence            999998876654 34332        2322   1   57899999999999999887655  788999999999999999


Q ss_pred             HHHHHhhcccCcchhHHHHHHHHHHHHHhhhhHHHhh
Q 048543          209 ICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCVE  245 (282)
Q Consensus       209 ial~v~~li~P~~a~~~L~~~va~~l~~~~~Yl~~v~  245 (282)
                      ++.+|+.+++|...++++++.+.+.+....++++...
T Consensus       157 ca~lv~~l~~P~~~~~~l~~~l~~~~~~~~~~~~~~l  193 (652)
T PRK10631        157 CAILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCI  193 (652)
T ss_pred             HHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999887764

>PRK11427 multidrug efflux system protein MdtO; Provisional

Probab=99.86  E-value=2.3e-20  Score=189.15  Aligned_cols=172  Identities=15%  Similarity=0.039  Sum_probs=138.7

Q ss_pred             HHHhcccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHH
Q 048543           68 QFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSL  147 (282)
Q Consensus        68 ~~w~~~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~  147 (282)
                      -+|.....||..++|++|+.+++.++..++...+    + +++||+++|+++|+||+.|.|.+|+.+|++||++|+++|+
T Consensus       339 ~~~~dA~tNp~~~R~ALRt~lAa~La~~i~~~l~----w-~~pyWamLTvvIVsqP~~GaT~sRa~~RiiGTliGallA~  413 (683)
T PRK11427        339 SMVADAFTNPDYMRYALKTLLACLICYTFYSGVD----W-EGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILAL  413 (683)
T ss_pred             hhhHHhccCHHHHHHHHHHHHHHHHHHHHHHHcC----C-CccHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            4566666788899999999999998888876654    4 7999999999999999999999999999999999999999


Q ss_pred             HHHHHh-hcCchhH-h---H-----HH--Hh--c-chhhHHHHHHHHHHHHHHhc-CCh-hHHHHHHHHHHHHHHHHHHH
Q 048543          148 GIAELS-VCRGLPG-S---Y-----YC--HQ--Y-FYSRLASFFLLTYCIVLVSG-TST-TFFRTAFYRLVLIAVGAGIC  210 (282)
Q Consensus       148 ~l~~l~-~~~g~~~-~---v-----f~--~t--~-~~~Y~~~v~~lT~~lV~v~~-~~~-~~~~~a~~Ril~i~IG~~ia  210 (282)
                      ++..+. +...... .   +     +.  ..  . +++|++..+++|+.++.+.. ... .....+.+|+++|++|++++
T Consensus       414 ll~v~l~P~l~~~~~Llllllp~~llg~wv~~~~~R~sYa~~~ag~T~~li~L~~l~~p~~d~~~i~dRvl~tLLGi~iA  493 (683)
T PRK11427        414 LFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGILIGTVVS  493 (683)
T ss_pred             HHHHHhccccccHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhhcccCcccchHHHHHHHHHHHHHHHHH
Confidence            987543 2221111 1   1     11  11  1 77899998889988877643 222 23456678999999999999


Q ss_pred             HHHhhcccCcchhHHHHHHHHHHHHHhhhhHHHh
Q 048543          211 LVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCV  244 (282)
Q Consensus       211 l~v~~li~P~~a~~~L~~~va~~l~~~~~Yl~~v  244 (282)
                      .+++.++||.|.++.+++.+.+.++...+|++..
T Consensus       494 ~la~~lVwP~~~~~~L~~~l~~aLr~la~~l~~~  527 (683)
T PRK11427        494 AVIYTFVWPESEARTLPQKLAGALGMLSKVLRIP  527 (683)
T ss_pred             HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999864

>COG1289 Predicted membrane protein [Function unknown]

Probab=99.78  E-value=8.3e-18  Score=172.33  Aligned_cols=170  Identities=18%  Similarity=0.122  Sum_probs=139.9

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccC-hhhHHHHHHhhhhHHHHHHHHHHHHHH
Q 048543           73 GRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFS-VGATLNKGFNRALGTFSAGGLSLGIAE  151 (282)
Q Consensus        73 ~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps-~GaT~~k~~~RilGTllG~~lg~~l~~  151 (282)
                      .++++...+|++|+++++.++..+....+    + +++||+++|+++|++|+ +|+|.+|+.+|++||++|+++|+++..
T Consensus       348 ~~~~~~alr~a~R~ala~~~~~~~~~~~~----w-~~g~w~llt~~vV~~~~~~~~t~~r~~~ri~GTllg~~~g~~~l~  422 (674)
T COG1289         348 HRLNSPALRHALRTALALLLGYAFWLALG----W-PHGYWILLTAAVVCQPNAYGATRQRARQRILGTLLGLLLGLLVLL  422 (674)
T ss_pred             hCCcHHHHHHHHHHHHHHHHHHHHHHHhc----C-CccHHHHHHHHHHcCcccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45567778889999888888888776655    3 79999999999999999 999999999999999999999999887


Q ss_pred             HhhcCch--hHhH----HH--Hhc-chhhHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Q 048543          152 LSVCRGL--PGSY----YC--HQY-FYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMW  221 (282)
Q Consensus       152 l~~~~g~--~~~v----f~--~t~-~~~Y~~~v~~lT~~lV~v~~~~~-~~~~~a~~Ril~i~IG~~ial~v~~li~P~~  221 (282)
                      +.....+  +..+    +.  +.+ ..+|....+++|+.+.+..+... +...+...|++|+++|++|+++++.++||.|
T Consensus       423 ~~~p~~~~~l~~l~~~~~l~~~~~~~~~~~~a~~~i~l~v~~~~~l~~~~~~~~~~~r~~d~~iG~lIa~~~a~~v~~~~  502 (674)
T COG1289         423 LLLPLIPGLLLLLLLAALLFAAGIRLAKYRLATLGITLLVLFLVGLLGSNGPDYDLPRFLDTLLGSLIALALAFLVWPLW  502 (674)
T ss_pred             HhcccchhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7443322  1111    11  222 66777777777887777766555 8888999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhhhHHHhhhc
Q 048543          222 AGEDLHKLVVKFSKASLLPWKCVEYE  247 (282)
Q Consensus       222 a~~~L~~~va~~l~~~~~Yl~~v~~~  247 (282)
                      ....+++..++.++++.+|+......
T Consensus       503 ~~~~l~~~~~~~l~~~~~~l~~~~~~  528 (674)
T COG1289         503 RPRRLRRALRRALRALRRDLASALSR  528 (674)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999998887543

>PF13515 FUSC_2: Fusaric acid resistance protein-like

Probab=99.69  E-value=3e-16  Score=127.19  Aligned_cols=104  Identities=27%  Similarity=0.283  Sum_probs=87.4

Q ss_pred             CCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCchhHhH-------HHHhc--chhhHHHHHHH
Q 048543          108 QYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGSY-------YCHQY--FYSRLASFFLL  178 (282)
Q Consensus       108 ~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g~~~~v-------f~~t~--~~~Y~~~v~~l  178 (282)
                      +|++|+++|+++|++|+.++|.+|+.+|++||++|+++|+++..+.+.+  +...       ++..+  .++|....+++
T Consensus        12 ~~~~W~~it~~~v~~~~~~~~~~~~~~Ri~Gt~iG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~y~~~~~~~   89 (128)
T PF13515_consen   12 PHGYWAPITVVSVLSPSYGATVNRAIQRILGTLIGVVLGLLLLYLFPGN--YVLILIVFLLMFLIFYFLSKNYAIAQIFI   89 (128)
T ss_pred             CchHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            7999999999999999999999999999999999999999998775543  3322       22223  67898888899


Q ss_pred             HHHHHHHhcCC---h-hHHHHHHHHHHHHHHHHHHHHHH
Q 048543          179 TYCIVLVSGTS---T-TFFRTAFYRLVLIAVGAGICLVV  213 (282)
Q Consensus       179 T~~lV~v~~~~---~-~~~~~a~~Ril~i~IG~~ial~v  213 (282)
                      |+.++++.++.   + +.++.+.+|+.++++|+++++++
T Consensus        90 t~~~v~~~~~~~~~~~~~~~~~~~R~~~v~iG~~i~~~v  128 (128)
T PF13515_consen   90 TVMVVLLFSLIHPGNGDPWQLALERILDVLIGILIALLV  128 (128)
T ss_pred             HHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence            99988877652   3 77889999999999999999864

>PRK11427 multidrug efflux system protein MdtO; Provisional

Probab=99.53  E-value=4.3e-13  Score=136.54  Aligned_cols=161  Identities=12%  Similarity=-0.016  Sum_probs=128.0

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhc
Q 048543           76 DPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVC  155 (282)
Q Consensus        76 dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~  155 (282)
                      .|.+.-..+|..++.+++.+++...+.     ++++|+..||++|+||+.|.|.+|++.|++||++|+.+++++..+..+
T Consensus        26 ~P~r~~~~~r~~~a~~L~l~i~~~l~~-----P~~a~a~~~vfivsqp~~g~t~~kai~r~vgt~lg~~~~vll~~~~v~  100 (683)
T PRK11427         26 RPGRVPQTLQLWVGCLLVILISMTFEI-----PFLALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYG  100 (683)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHHHHheeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            355555669999999999888877654     799999999999999999999999999999999999999999877655


Q ss_pred             CchhHhH------HHHhc-----chhhHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHH-----HHHHHHHHHHHhhccc
Q 048543          156 RGLPGSY------YCHQY-----FYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVL-----IAVGAGICLVVNVCIY  218 (282)
Q Consensus       156 ~g~~~~v------f~~t~-----~~~Y~~~v~~lT~~lV~v~~~~~-~~~~~a~~Ril~-----i~IG~~ial~v~~li~  218 (282)
                      .+.+..+      +++.|     +.+|.+++..+|. ++.. ++.+ ....-+..|..+     +.+|++++.+||.++|
T Consensus       101 ~P~l~~l~ialw~~~~lyl~r~~rl~yvf~lag~ta-ii~~-~f~~v~~~~E~~~R~~e~~w~~i~~gi~ca~lV~~l~~  178 (683)
T PRK11427        101 YPLIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVA-IYGQ-TFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWF  178 (683)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH-HHHh-hcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhHhC
Confidence            4322221      23344     5599999988884 4411 2222 222233889988     9999999999999999


Q ss_pred             CcchhHHHHHHHHHHHHHhhhhHHH
Q 048543          219 PMWAGEDLHKLVVKFSKASLLPWKC  243 (282)
Q Consensus       219 P~~a~~~L~~~va~~l~~~~~Yl~~  243 (282)
                      |..-++.++..+.+.++..++++..
T Consensus       179 P~~~~~~l~~~l~~~l~~a~~~l~~  203 (683)
T PRK11427        179 PSRAINQMHQALNDRLDDAISHLTD  203 (683)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999998887655

>PF06081 DUF939: Bacterial protein of unknown function (DUF939); InterPro: IPR010343 This entry consists of several hypothetical bacterial proteins of unknown function

Probab=99.52  E-value=2.7e-13  Score=113.79  Aligned_cols=128  Identities=23%  Similarity=0.301  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCchhHh
Q 048543           82 FAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGS  161 (282)
Q Consensus        82 ~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g~~~~  161 (282)
                      ..+|+++|.+++..++.+.+.     ++++++.+++++.+|||...|++.+++|+.|+++|+++|+++..+.... ++..
T Consensus         6 r~iKtaiA~~la~~ia~~l~~-----~~~~~A~i~Ail~~q~T~~~S~~~~~~Ri~~~~iG~~~a~~~~~~~g~~-~~~~   79 (141)
T PF06081_consen    6 RTIKTAIAAFLAILIAQLLGL-----QYPFFAPIAAILSMQPTVYRSLKQGLNRILGTLIGALLALLFFLILGYN-PLSI   79 (141)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-----CchHHHHHHHhheeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc-HHHH
Confidence            568999999999999876643     6899999999999999999999999999999999999999998775433 3322


Q ss_pred             H---H-----HHhcchhhHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 048543          162 Y---Y-----CHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCI  217 (282)
Q Consensus       162 v---f-----~~t~~~~Y~~~v~~lT~~lV~v~~~~~~~~~~a~~Ril~i~IG~~ial~v~~li  217 (282)
                      .   +     +..++.+-+.....++...++.+  .++.+..+..|++++++|+++++++|+++
T Consensus        80 ~l~v~i~i~~~~~l~~~~~~~~a~v~~~~i~~~--~~~~~~~~~~r~l~t~iG~~va~lVN~~~  141 (141)
T PF06081_consen   80 GLAVIITIPICNWLKLGEGIIVAAVTFVHILLS--GSDSFSYALNRVLLTLIGIGVALLVNLLM  141 (141)
T ss_pred             HHHHHHHHHHHHHhCCCCeehHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            1   1     12225555555555555444432  23333449999999999999999999864

>COG4129 Predicted membrane protein [Function unknown]

Probab=99.47  E-value=8.1e-12  Score=118.33  Aligned_cols=149  Identities=17%  Similarity=0.134  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCchh
Q 048543           80 AVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLP  159 (282)
Q Consensus        80 ~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g~~  159 (282)
                      ....+|+|+|.+++.+++.+.++     +.+.-|.+|+++.++||...++.++++|+.|+.+|+++|.++..++... ++
T Consensus        10 g~RtlKt~ia~~La~~ia~~l~~-----~~~~~A~i~AV~~l~~t~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g~~-~~   83 (332)
T COG4129          10 GARTLKTGLAAGLALLIAHLLGL-----PQPAFAGISAVLCLSPTIKRSLKRALQRLLGNALGAILAVLFFLLFGQN-PI   83 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC-----CchHHHHHHHhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc-HH
Confidence            45679999999999999987654     6888999999999999999999999999999999999999998886533 44


Q ss_pred             Hh-H---H----HHhcchhhHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-hhHHHHHHH
Q 048543          160 GS-Y---Y----CHQYFYSRLASFFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMW-AGEDLHKLV  230 (282)
Q Consensus       160 ~~-v---f----~~t~~~~Y~~~v~~lT~~lV~v~~~~~~~~~~a~~Ril~i~IG~~ial~v~~li~P~~-a~~~L~~~v  230 (282)
                      .. +   +    +..+...-+.....++...+++....+.++...  |+++++||+++++++|.++.|.- +-+..++.+
T Consensus        84 ~~~v~~~i~i~~~~~~~~~~g~~~~~~~~~~ii~~~~~~~~~~~~--r~l~~~vG~~~a~lvn~~~~~~~~~~~~~~~kv  161 (332)
T COG4129          84 AFGVVLLIIIPLLVLLKLENGVVPITVGVLHILVAAMIPLFLIFN--RFLLVFVGVGVAFLVNLVMPPPDYELKLYRAKV  161 (332)
T ss_pred             HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHcccchhHHHH--HHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHH
Confidence            32 1   2    122245554443333333333333332333333  99999999999999999888765 444444444


Q ss_pred             HHHHHH
Q 048543          231 VKFSKA  236 (282)
Q Consensus       231 a~~l~~  236 (282)
                      ...++.
T Consensus       162 ~~~~~~  167 (332)
T COG4129         162 EAILAS  167 (332)
T ss_pred             HHHHHH
Confidence            444444

>COG1289 Predicted membrane protein [Function unknown]

Probab=99.36  E-value=3e-11  Score=124.12  Aligned_cols=162  Identities=21%  Similarity=0.162  Sum_probs=130.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhc
Q 048543           76 DPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVC  155 (282)
Q Consensus        76 dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~  155 (282)
                      ...+++|++|+.+++.++..++|..+.     ++++|+++|+.+|++|+.|+.+.|++.|++||++|..++.++..+..+
T Consensus         7 ~~~~~~~~lr~~~a~~la~~~~~~~~l-----~~~~~~~~~~~i~~~~~~~~~~~~~~~rli~tlig~~~~~~~~~~~~~   81 (674)
T COG1289           7 TNADWRYALRTFLAACLALALAFLLGL-----PQPSWAVSTVAIVSAPDSGAVLSKGLKRLIGTLIGFAVALLLVALLAQ   81 (674)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCC-----CCccHHHHHHHHHhCcCCCCHHHhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence            345799999999999999999988764     799999999999999999999999999999999999999999876544


Q ss_pred             CchhHhH--------HHHhc------chhhHHHHHHHHHHHHHHhc--CCh--hHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 048543          156 RGLPGSY--------YCHQY------FYSRLASFFLLTYCIVLVSG--TST--TFFRTAFYRLVLIAVGAGICLVVNVCI  217 (282)
Q Consensus       156 ~g~~~~v--------f~~t~------~~~Y~~~v~~lT~~lV~v~~--~~~--~~~~~a~~Ril~i~IG~~ial~v~~li  217 (282)
                      . ++..+        +|..+      ...|++.+.+.|..++. ..  ...  ..+..+++|+.++++|+.+.-.+....
T Consensus        82 ~-p~~f~~~~~~~~~l~~~~~~~~~~~~~~a~~la~yT~~~~~-~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~  159 (674)
T COG1289          82 E-PWLFLLLLTLWLGLCTAIGSLYRTIASYAFVLAGYTALIIG-PAPAIPEPELLFDGAVWRVVEILLGILCAPVVPLLE  159 (674)
T ss_pred             C-cHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhc-cccccccHHHHHHHHHHHHHHHHHHHHHhccchHhh
Confidence            3 24332        23222      67888888888988887 22  222  478899999999999999999999998


Q ss_pred             cCcchhHHHHHHHHHHHHHhhhhHHHh
Q 048543          218 YPMWAGEDLHKLVVKFSKASLLPWKCV  244 (282)
Q Consensus       218 ~P~~a~~~L~~~va~~l~~~~~Yl~~v  244 (282)
                      +|...++.|.+.+.......-.|....
T Consensus       160 ~~~~~~~~L~~~l~~~~~~~~~~~~~~  186 (674)
T COG1289         160 SPSRLYQALANYLEAKSRLFAQLLLAA  186 (674)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhhhhh
Confidence            999998888888877766644444433

>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate

Probab=98.59  E-value=2.4e-06  Score=86.99  Aligned_cols=154  Identities=14%  Similarity=0.018  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhh--ccChhhHHHHHHhhhhHHHHHHHHHHHHHHH-hh
Q 048543           78 RKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVF--EFSVGATLNKGFNRALGTFSAGGLSLGIAEL-SV  154 (282)
Q Consensus        78 ~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~--qps~GaT~~k~~~RilGTllG~~lg~~l~~l-~~  154 (282)
                      ..+.+++|.++++.+++++....    ++ +.+.-+++++.++.  -.+.+....+...++.|+++|+++|+++..+ .+
T Consensus       338 ~A~~~alra~la~~~~~l~Wi~t----~W-~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP  412 (650)
T PF04632_consen  338 LALRNALRAFLAILIAGLFWIAT----GW-PSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLP  412 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc----CC-ChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            34566667766666666665444    44 56777777766665  6788899999999999999999999987653 23


Q ss_pred             cCchhHhH--------HHHhc-----chhhHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 048543          155 CRGLPGSY--------YCHQY-----FYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPM  220 (282)
Q Consensus       155 ~~g~~~~v--------f~~t~-----~~~Y~~~v~~lT~~lV~v~~~~~-~~~~~a~~Ril~i~IG~~ial~v~~li~P~  220 (282)
                      +...+...        +...+     ++.|....+.+.|.+.+..++.. -.+....++.+-+++|++++.++..+++|.
T Consensus       413 ~~~~f~~L~l~l~~~l~~~~~~~~~p~~~~~g~~~~v~f~~~~~~~n~~~~d~~~f~n~~la~l~G~~~a~l~~~li~p~  492 (650)
T PF04632_consen  413 HLDGFPLLALVLAPFLFLGGLLMARPRTAYIGLGFAVFFLLLLGPGNPYSYDFATFLNRALAILLGIVIAALVFRLIRPF  492 (650)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            22222221        11222     56665556666666555455544 455678999999999999999999999998


Q ss_pred             chhHHHHHHHHHHHHH
Q 048543          221 WAGEDLHKLVVKFSKA  236 (282)
Q Consensus       221 ~a~~~L~~~va~~l~~  236 (282)
                      ......+...+...++
T Consensus       493 ~~~~~~rrl~~~~~~~  508 (650)
T PF04632_consen  493 SPEWRRRRLLRALRRD  508 (650)
T ss_pred             ChhHHHHHHHHHHHHH
Confidence            7766665555555444

It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane

>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi

Probab=98.16  E-value=0.0002  Score=70.84  Aligned_cols=169  Identities=17%  Similarity=0.117  Sum_probs=103.4

Q ss_pred             HHHhcccCCchHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhc-cChhhHHHHHHhhhhHHHHHHHHH
Q 048543           68 QFYDMGRKDPRKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFE-FSVGATLNKGFNRALGTFSAGGLS  146 (282)
Q Consensus        68 ~~w~~~~~dp~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~q-ps~GaT~~k~~~RilGTllG~~lg  146 (282)
                      ..|-.-..|.+.++--+|-+++..++.++....+...-+|+.+|.+++..+++.- -..|..+...+.=++|+.+|...+
T Consensus         4 p~W~~~~ld~~~~k~~~k~~i~~~i~~~l~~i~~~~~~~g~~~yl~~i~~~~~~p~~~~~~~~~~~~~~~~g~~~g~~~~   83 (459)
T PF10337_consen    4 PAWLLDHLDRRSLKIMFKCWIAPWIALILCQIPPVARWLGTAGYLAPIISVIVPPGRPRGKFLEAMILLLLGVCLGWAWG   83 (459)
T ss_pred             chhhhcCCCHHHHHHHHHHHHHHHHHHHHHhchHHHHHhcchhHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566556688888888999999999999887766555566788888766555432 246777777777777777777777


Q ss_pred             HHHHHHhhc---------------------Cc--hhHh-----------------H---H--HHhc-----c--hh-hHH
Q 048543          147 LGIAELSVC---------------------RG--LPGS-----------------Y---Y--CHQY-----F--YS-RLA  173 (282)
Q Consensus       147 ~~l~~l~~~---------------------~g--~~~~-----------------v---f--~~t~-----~--~~-Y~~  173 (282)
                      ++..+++..                     ++  +...                 +   |  +..|     +  +. +.+
T Consensus        84 ~l~~~~a~~aR~~~t~a~l~~~~~~~~~~~s~~~~~~~~~~~i~~G~~~~a~~saV~av~l~~~i~~~~~lRa~~p~~~~  163 (459)
T PF10337_consen   84 LLAMYIAVAARPHDTQARLQQLQQSAGACTSGPNPAACAQQLIFDGFFYDARASAVFAVFLFVFIYFHGWLRAKNPKLNF  163 (459)
T ss_pred             HHHHHHHHHHccCccHHHHHHHHHHhccccCCCChhHHHHHhhcccceecchHHHHHHHHHHHHHHHHHHHHHhCcchHH
Confidence            666555321                     11  0000                 0   1  1111     1  11 222


Q ss_pred             H-HH-HHHHHHHHHhcC--Ch-hHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHHHHHHHHHHH
Q 048543          174 S-FF-LLTYCIVLVSGT--ST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKA  236 (282)
Q Consensus       174 ~-v~-~lT~~lV~v~~~--~~-~~~~~a~~Ril~i~IG~~ial~v~~li~P~~a~~~L~~~va~~l~~  236 (282)
                      . ++ .+...+.+..+.  ++ ....++..=+.-.++|+++++++|.+|||...+..+.+.+.+.+..
T Consensus       164 ~~I~~~I~~~i~~t~g~~~p~~~~~~l~~~ll~P~~ig~ai~~~vslliFP~sss~~~~~~~~~~l~~  231 (459)
T PF10337_consen  164 PVIFGSIFVDIFLTYGPLFPTFFAYTLGKTLLKPFLIGIAIALVVSLLIFPESSSHVVLKSMEDYLRL  231 (459)
T ss_pred             HHHHHHHHHHHHHHhCcCcCcchHHHHHHHHHHHHHHHHHHHHHHheeecCCCchHHHHHHHHHHHHH
Confidence            2 11 112212222221  22 2334444445678899999999999999999997777776666655

Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.

>TIGR01666 YCCS hypothetical membrane protein, TIGR01666

Probab=97.63  E-value=0.0055  Score=63.93  Aligned_cols=159  Identities=11%  Similarity=0.043  Sum_probs=106.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCc
Q 048543           78 RKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG  157 (282)
Q Consensus        78 ~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g  157 (282)
                      .++.+++|+.+++..+.++.+..+.   . +-+.=+.+.++...-.+....+..-+++++-|++...++.....+.... 
T Consensus         6 ~~~~~~lri~ia~~~~~~~~~~~~~---~-~~~~~l~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-   80 (704)
T TIGR01666         6 AKVIYTIPIFIALNGAAVGIWFFDI---S-SQSMPLILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-   80 (704)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCc---h-hHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            4688999999999888777665441   1 2344456777766667777888888888889998888888877764433 


Q ss_pred             hhHhH-------HHHhc----chhhHHHHHHHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhH
Q 048543          158 LPGSY-------YCHQY----FYSRLASFFLLTYCIVL--VSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWAGE  224 (282)
Q Consensus       158 ~~~~v-------f~~t~----~~~Y~~~v~~lT~~lV~--v~~~~~~~~~~a~~Ril~i~IG~~ial~v~~li~P~~a~~  224 (282)
                      +|..+       |+++.    -..|+ .+.+.|..+..  +.+...  ....+...+.+++|++.-.+.+.+.++.|..+
T Consensus        81 p~lf~~~l~~~tf~~~mlga~G~Rya-~Iaf~tLliaiytmlg~~~--~~~w~~~pllll~GalwY~llsl~~~~l~p~r  157 (704)
T TIGR01666        81 PWLFAVGLTVSTFGFIMLGAVGQRYA-TIAFGSLLVALYTMLGYIE--VNVWFIQPVMLLCGTLWYSVVTLIVHLFFPNR  157 (704)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHHhcccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            34332       22222    12222 22222222111  112211  11235578889999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhHHHh
Q 048543          225 DLHKLVVKFSKASLLPWKCV  244 (282)
Q Consensus       225 ~L~~~va~~l~~~~~Yl~~v  244 (282)
                      .+++.+++.+.+-.+|++.-
T Consensus       158 p~q~~LA~~y~~La~yL~ak  177 (704)
T TIGR01666       158 PVQENLAKAFCQLAEYLETK  177 (704)
T ss_pred             hHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988998875

This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.

>PF12805 FUSC-like: FUSC-like inner membrane protein yccS

Probab=97.26  E-value=0.0083  Score=55.61  Aligned_cols=50  Identities=12%  Similarity=0.146  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchhHHHHHHHHHHHHHhhhhHHHh
Q 048543          195 TAFYRLVLIAVGAGICLVVNVCIYPMWAGEDLHKLVVKFSKASLLPWKCV  244 (282)
Q Consensus       195 ~a~~Ril~i~IG~~ial~v~~li~P~~a~~~L~~~va~~l~~~~~Yl~~v  244 (282)
                      -++.+.+.+++|+++.++.+.+.||.|..+..++.+++.+..-.+|++.-
T Consensus        70 ~~~~~~~l~~~Gglwy~~lsl~~~~l~p~r~~rqaLa~~y~~lA~yl~~k  119 (284)
T PF12805_consen   70 EALEHALLFLAGGLWYLLLSLLWWPLRPYRPVRQALAECYRALADYLRAK  119 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999999999999999885

>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family

Probab=97.05  E-value=0.072  Score=55.76  Aligned_cols=157  Identities=11%  Similarity=0.054  Sum_probs=98.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCc
Q 048543           78 RKAVFAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRG  157 (282)
Q Consensus        78 ~~~~~alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g  157 (282)
                      .++.+++|+.+++..+.++.+..+.   . ..+.=+.+.++..--.+....+.-=+++++-|++...++....++.... 
T Consensus         6 ~~~~~~l~v~ia~~~~~~~~~~~g~---~-~~~i~l~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~-   80 (701)
T TIGR01667         6 QKLVYCLPVFIALMGAELRIWWFGL---L-FLLIPLCLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK-   80 (701)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCC---c-cHHHHHHHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            4678999999999888776655432   1 2344455666655556666777666777777777777777766654333 


Q ss_pred             hhHhH-------HHHhc----chhhHHH----HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 048543          158 LPGSY-------YCHQY----FYSRLAS----FFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNVCIYPMWA  222 (282)
Q Consensus       158 ~~~~v-------f~~t~----~~~Y~~~----v~~lT~~lV~v~~~~~~~~~~a~~Ril~i~IG~~ial~v~~li~P~~a  222 (282)
                      +|..+       |+++.    -..|+..    +.+..|.+   .+...  ...-+.--+.+++|++.-.+.+.+.++.|.
T Consensus        81 p~~~~~~l~~~tf~~~mlga~G~r~~~I~f~~L~~aiytm---l~~~~--~~~w~~~pllll~GalwY~l~sll~~~l~p  155 (701)
T TIGR01667        81 PWLFPFLLTLLTFGFILLGALGQRYATIAFASLLAAIYTM---LGAGE--VPVWFIEPLLILAGTLWYGLLTLIWFLLFP  155 (701)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHH---cCccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            34332       22222    2233211    11112221   12222  111233566788899999999999888888


Q ss_pred             hHHHHHHHHHHHHHhhhhHHHh
Q 048543          223 GEDLHKLVVKFSKASLLPWKCV  244 (282)
Q Consensus       223 ~~~L~~~va~~l~~~~~Yl~~v  244 (282)
                      .+..++.+++.+.+-.+|++.-
T Consensus       156 ~rp~q~~La~~y~~La~yL~aK  177 (701)
T TIGR01667       156 NQPLQESLSRLYRELAEYLEAK  177 (701)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999988998775

TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane

>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional

Probab=95.98  E-value=0.81  Score=47.63  Aligned_cols=136  Identities=14%  Similarity=-0.061  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccccCCCCCchHHH-HHHHHhhcc-ChhhHHHHHHhhhhHHHHHHHHHHHHHHH-hhcC-c
Q 048543           82 FAAKMGLSLALVSLVVFFKEPLSNVSQYSIWAI-LTVVVVFEF-SVGATLNKGFNRALGTFSAGGLSLGIAEL-SVCR-G  157 (282)
Q Consensus        82 ~alK~aLalala~ll~~~~~~~~~~~~~~~WA~-lTvvvV~qp-s~GaT~~k~~~RilGTllG~~lg~~l~~l-~~~~-g  157 (282)
                      -++|.++++.+++.+...    .++ +.|.=++ ++++++.-. +...-..-+.+=+.||++|..+|.++... .+.. +
T Consensus       355 ~glRa~~ai~~~~~fWI~----TgW-~~Ga~a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~f~vLP~i~~  429 (652)
T PRK10631        355 NGWRTTLATALGTLFWLW----TGW-TSGSGAMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYFMVIIPNTQQ  429 (652)
T ss_pred             HHHHHHHHHHHHHHHHHH----ccC-chHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            345666666666555433    344 3444444 333333221 22223444566678999999999887543 2221 1


Q ss_pred             hhHhH------H--H-Hhc--chhhHHHHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 048543          158 LPGSY------Y--C-HQY--FYSRLASFFLLTYCIVLVSGTST-TFFRTAFYRLVLIAVGAGICLVVNVCIYPMWA  222 (282)
Q Consensus       158 ~~~~v------f--~-~t~--~~~Y~~~v~~lT~~lV~v~~~~~-~~~~~a~~Ril~i~IG~~ial~v~~li~P~~a  222 (282)
                      .+...      +  + ...  +..++..-+.+.++..+...... -.+...++--+-.++|+++++++..++-|.-.
T Consensus       430 ~f~lL~laLap~~~~~g~~~~~~~~~~lg~~i~f~~~l~l~n~~~~d~~~FlN~alA~v~Gi~~A~l~f~lirp~~~  506 (652)
T PRK10631        430 SMLLLCISLGVLGFFIGIEVQKRRLGSLGALASTINILVLDNPMTFHFSQFLDSALGQIVGCFLALIVILLVRDNSR  506 (652)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence            12111      1  1 122  34555333344444333333332 33455677788899999999999988877633

>PF11168 DUF2955: Protein of unknown function (DUF2955); InterPro: IPR022604 Some members in this group of proteins with unknown function are annotated as membrane proteins

Probab=95.34  E-value=0.41  Score=40.04  Aligned_cols=125  Identities=10%  Similarity=0.019  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHHHHHhhccccCCCCCchHHHHHHHHhhccChhhHHHHHHhhhhHHHHHHHHHHHHHHHhhcCchhHh-
Q 048543           83 AAKMGLSLALVSLVVFFKEPLSNVSQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLSLGIAELSVCRGLPGS-  161 (282)
Q Consensus        83 alK~aLalala~ll~~~~~~~~~~~~~~~WA~lTvvvV~qps~GaT~~k~~~RilGTllG~~lg~~l~~l~~~~g~~~~-  161 (282)
                      ++|.+++.+++..+++..++     +.|+-+.+-.++++.+.---+.+...+=++.+++-+..+..+..+..+.+ ... 
T Consensus         2 ~LRia~g~~l~l~~~~~~~~-----~~p~~~pvf~~~lL~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~ll~~~P-~~~~   75 (140)
T PF11168_consen    2 ALRIAFGVTLGLFLSKLFGW-----PLPFFAPVFPAILLGMVPPPPLKMLLQLLLVALLTALEGLLLSGLLQDYP-VVML   75 (140)
T ss_pred             eeehhHHHHHHHHHHHHHCC-----CchHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHH
Confidence            47888888888888877664     68888988888877666667778888888888888888888877654432 222 


Q ss_pred             --H---HHHhc-----chhhHHH-HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 048543          162 --Y---YCHQY-----FYSRLAS-FFLLTYCIVLVSGTSTTFFRTAFYRLVLIAVGAGICLVVNV  215 (282)
Q Consensus       162 --v---f~~t~-----~~~Y~~~-v~~lT~~lV~v~~~~~~~~~~a~~Ril~i~IG~~ial~v~~  215 (282)
                        +   ++..|     +-++.+. ...+...++...+.  .....+.++......+.+++.++.+
T Consensus        76 l~v~l~~~~~f~~~~~~~~~l~~~~~lv~~~ii~~f~~--~~~~~~~~l~~~l~~~~~iav~i~~  138 (140)
T PF11168_consen   76 LLVFLLFFWSFYRMSRGPKFLFGTMLLVGLSIIPVFAS--YNTADAEDLILSLVLAILIAVLIAA  138 (140)
T ss_pred             HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHh--cCcchHHHHHHHHHHHHHHHHHHHH
Confidence              1   22222     2233332 22222222222221  1224556777777888888777765

However, this cannot be confirmed.

>COG4129 Predicted membrane protein [Function unknown]

Probab=84.51  E-value=5.7  Score=38.11  Aligned_cols=30  Identities=37%  Similarity=0.176  Sum_probs=24.6

Q ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHhhcCc
Q 048543          128 TLNKGFNRALGTFSAGGLSLGIAELSVCRG  157 (282)
Q Consensus       128 T~~k~~~RilGTllG~~lg~~l~~l~~~~g  157 (282)
                      -..|...|++=|.+|+.+++.+..+...+.
T Consensus         5 ~~~~ig~RtlKt~ia~~La~~ia~~l~~~~   34 (332)
T COG4129           5 RMRKIGARTLKTGLAAGLALLIAHLLGLPQ   34 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            356788999999999999999988765553

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00