Citrus Sinensis ID: 048596

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFCCPGK
Secondary Structure (PSIPRED)
cccccccHHHHHccccccccccccHHccccHHHHHHHHHHHccHHHHccccccccccccccccccccccccccccccccccccccccccEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHEcccccccccEcHHHHHHHHHHHHHcccccccccHHHccccccccccccEEcccccccEEEccccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
matfqrsevsfrrqgssglvwqdafisgdlNQMRREQMKKATnsrelrhsqsdgsvgmmqnrqsnggiifrtskvlpdidppspkvsgcwfccpgk
Flexible Loop (DISEMBL)
matfqrsevsfrrqgssglvwqdafisgdlnQMRREQMKKatnsrelrhsqsdgsvgmmQNRQSNGGIIFRTSkvlpdidppspkvsgcwfccpgk
Low Complexity Region (SEG)
MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFCCPGK
Disordered region (IsUnstruct)
******************LVWQDAFI*****************************************IIFRTSKVL********KVSGCWFCC***
Disordered Region (DISOPRED)
*******************VWQ*******************************************************DIDPPSPKVSGCWFCCPG*
Disordered Region (DISEMBL)
****************SGLVWQDAFISGDLNQMRR******************GSVGMMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFCCPGK
Disordered Region (DISPRO)
******************LVWQDAFISGDLNQM************************************FRTSKVLPDIDPPSPKVSGCWFCCPGK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFCCPGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	96	2.2.26 [Sep-21-2011]
Q9XI29	148	Uncharacterized protein A	yes	no	0.947	0.614	0.376	3e-09

>sp|Q9XI29|Y1540_ARATH Uncharacterized protein At1g15400 OS=Arabidopsis thaliana GN=At1g15400 PE=1 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 26/117 (22%)

Query: 1   MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQ----------MRREQMKKATNSRE---- 46
           M   QRS +SFRRQGSSG+V+ D  I+ +LN+           R EQ K  + S E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 59

Query: 47  ------LRHSQSDGSV-GMMQNRQSNGGIIFR----TSKVLPDIDPPSPKVSGCWFC 92
                 LR  ++ G   G ++  +SNGG   R    T +V P +DPPSP++S C  C
Sbjct: 60  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCC 116


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.131    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,314,293
Number of Sequences: 539616
Number of extensions: 1064265
Number of successful extensions: 2610
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2608
Number of HSP's gapped (non-prelim): 5
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
225445444	114	PREDICTED: uncharacterized protein At1g1	0.958	0.807	0.5	2e-19
147821408	153	hypothetical protein VITISV_011678 [Viti	0.958	0.601	0.5	3e-19
414876092	118	TPA: hypothetical protein ZEAMMB73_71774	0.958	0.779	0.49	1e-15
226502847	118	uncharacterized protein LOC100278668 [Ze	0.958	0.779	0.49	2e-15
356519369	109	PREDICTED: uncharacterized protein At1g1	0.906	0.798	0.5	4e-15
357134448	120	PREDICTED: uncharacterized protein At1g1	0.958	0.766	0.456	6e-15
326533924	126	predicted protein [Hordeum vulgare subsp	0.916	0.698	0.494	6e-15
224058685	125	predicted protein [Populus trichocarpa]	1.0	0.768	0.415	1e-14
449469000	120	PREDICTED: uncharacterized protein At1g1	0.885	0.708	0.462	2e-14
356550604	115	PREDICTED: uncharacterized protein At1g1	0.968	0.808	0.446	2e-14

>gi|225445444|ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400 [Vitis vinifera]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 1  MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRR--EQMKKATNSRELRHSQSDGSVGM 58
          MA  QRSE+SFRRQGSSG VW D F++G LNQ ++  ++ ++   + E + SQS   + +
Sbjct: 1  MAGLQRSEISFRRQGSSGSVWDDKFLAGALNQAKQNDQEEEQKAEAGEAKLSQSPAPISV 60

Query: 59 MQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
          M+  +SNGG  ++T KV P IDPPSP+VSGC  C
Sbjct: 61 MERSRSNGGQAYKTVKVAPAIDPPSPRVSGCGLC 94

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821408|emb|CAN63503.1| hypothetical protein VITISV_011678 [Vitis vinifera]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 1  MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRR--EQMKKATNSRELRHSQSDGSVGM 58
          MA  QRSE+SFRRQGSSG VW D F++G LNQ ++  ++ ++   + E + SQS   + +
Sbjct: 1  MAGLQRSEISFRRQGSSGSVWDDKFLAGALNQAKQNDQEEEQKAEAGEAKLSQSPAPISV 60

Query: 59 MQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
          M+  +SNGG  ++T KV P IDPPSP+VSGC  C
Sbjct: 61 MERSRSNGGQAYKTVKVAPAIDPPSPRVSGCGLC 94

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414876092|tpg|DAA53223.1| TPA: hypothetical protein ZEAMMB73_717742 [Zea mays]

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 8/100 (8%)

Query: 1   MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGM-- 58
           MA  QRS  +FRR GSSGLVW +   S D +Q   E    AT+ +ELRHS+S GSVG+  
Sbjct: 1   MAGLQRSSQTFRRSGSSGLVWDERLTSQDDDQSGPEDADAATDLKELRHSRSVGSVGLQP 60

Query: 59  ------MQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
                  + R  + G  FRT +V P +DPPSPKV GC FC
Sbjct: 61  QPQPQPQRRRSDDSGQGFRTRRVAPALDPPSPKVPGCIFC 100

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226502847|ref|NP_001145339.1| uncharacterized protein LOC100278668 [Zea mays] gi|195654837|gb|ACG46886.1| hypothetical protein [Zea mays]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 59/100 (59%), Gaps = 8/100 (8%)

Query: 1   MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVG--- 57
           MA  QRS  +FRR GSSGLVW +   S D +Q   E    AT+ +ELRHS+S GSVG   
Sbjct: 1   MAGLQRSSQTFRRSGSSGLVWDERLTSQDDDQSGPEDADAATDLKELRHSRSVGSVGLQP 60

Query: 58  -----MMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
                  + R  + G  FRT +V P +DPPSPKV GC FC
Sbjct: 61  QPLPQPQRRRSDDSGQGFRTRRVAPALDPPSPKVPGCIFC 100

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519369|ref|XP_003528345.1| PREDICTED: uncharacterized protein At1g15400-like [Glycine max]

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 5/92 (5%)

Query: 1  MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQ 60
          MA  QRSEVSFRRQGSSGLVW D  +SG+LN   + +  K  +  +L  + +  +   +Q
Sbjct: 1  MAGLQRSEVSFRRQGSSGLVWDDKLLSGELN---KNEDPKGAHGGDLNLNLNVRTTPPIQ 57

Query: 61 NRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
            +SNGG  +RT KV P I+PPSPK+S C FC
Sbjct: 58 RSRSNGG--YRTGKVSPAIEPPSPKLSACGFC 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357134448|ref|XP_003568829.1| PREDICTED: uncharacterized protein At1g15400-like [Brachypodium distachyon]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 11/103 (10%)

Query: 1   MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRR----EQMKKATNSRELRHSQSDGSV 56
           MA  QRS  +FRR GSSGL+W +   S D NQ  +    E    + + +ELRHS+S GS+
Sbjct: 1   MAELQRSSQTFRRSGSSGLIWDEKLTSEDQNQRDQGATGEAEVNSLDFKELRHSRSVGSM 60

Query: 57  GMMQNRQSNGGI-------IFRTSKVLPDIDPPSPKVSGCWFC 92
           G  Q RQ + G+        FRT  V P +DPPSPKV+ C FC
Sbjct: 61  GAAQRRQCSDGVRSTDGNQAFRTRHVPPALDPPSPKVASCMFC 103

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326533924|dbj|BAJ93735.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 7/95 (7%)

Query: 1  MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQ 60
          MA  QRS ++FRR GSSG+VW +  +S + +Q            RELRHS+S GSVG  +
Sbjct: 1  MAGLQRSSLTFRRSGSSGMVWGERLMSDEHSQW----TSGEPEFRELRHSRSVGSVGAQR 56

Query: 61 NRQ---SNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
           R     +GG  FRT +V P IDPPSPKV GC FC
Sbjct: 57 RRNDGTEHGGQAFRTRRVAPAIDPPSPKVPGCIFC 91

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058685|ref|XP_002299602.1| predicted protein [Populus trichocarpa] gi|222846860|gb|EEE84407.1| predicted protein [Populus trichocarpa]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 17/113 (15%)

Query: 1   MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQM-------------RREQMKKATNSREL 47
           MA  QRS+VSFRRQGSSGL+W D +ISG+LNQ+             +R ++K   ++R  
Sbjct: 1   MAGLQRSDVSFRRQGSSGLIWDDRYISGELNQVNQKQEHEEQPKRDQRTEIKLENDARPS 60

Query: 48  RHSQSDGSVGMMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFCC----PGK 96
             S +  ++ + ++R + G   +RT +V P I+PPSPKV  C FC     PGK
Sbjct: 61  SRSATTPNITIERSRSNGGQRGYRTGRVSPAIEPPSPKVFTCGFCGAFGKPGK 113

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469000|ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400-like [Cucumis sativus] gi|449484181|ref|XP_004156808.1| PREDICTED: uncharacterized protein At1g15400-like [Cucumis sativus]

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/106 (46%), Positives = 60/106 (56%), Gaps = 21/106 (19%)

Query: 1  MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDG------ 54
          M   QRS VSFRRQGSSGLVW D F+SG+L Q         T+ +E   +Q  G      
Sbjct: 1  MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQT------ATTSEKESEENQDQGKSTAAA 54

Query: 55 --------SVGMMQNRQSNGGIIFRTSKVLPDIDPPSPKVSGCWFC 92
                  S+ + ++R SNGG  +RT KV P I+PPSPKVS C FC
Sbjct: 55 AAAAVEPISITIERSR-SNGGRGYRTGKVSPAIEPPSPKVSACGFC 99

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550604|ref|XP_003543675.1| PREDICTED: uncharacterized protein At1g15400-like [Glycine max]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)

Query: 1  MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKATNSRELRHSQSDGSVGMMQ 60
          MA  QRS VSFRRQGSSG VW D F+S +LN+++ +Q        E++      +    +
Sbjct: 1  MAGLQRSAVSFRRQGSSGFVWDDRFLSEELNKVKEDQNNNNDGGPEIKELHQVQTTPPPE 60

Query: 61 NRQSNGGII-FRTSKVLPDIDPPSPKVSGCWFCC 93
            +SNGG   +RT KV P I+PPSP++S C FC 
Sbjct: 61 RTRSNGGARGYRTGKVSPAIEPPSPRLSACGFCA 94

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
TAIR|locus:2016264	138	AT1G80180 "AT1G80180" [Arabido	0.427	0.297	0.523	1.3e-13
TAIR|locus:2147710	113	AT5G20100 "AT5G20100" [Arabido	0.812	0.690	0.428	1.9e-12
TAIR|locus:2037738	148	AT1G15400 "AT1G15400" [Arabido	0.593	0.385	0.380	3e-05

TAIR|locus:2016264 AT1G80180 "AT1G80180" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
 Identities = 22/42 (52%), Positives = 27/42 (64%)

Query:     1 MATFQRSEVSFRRQGSSGLVWQDAFISGDLNQMRREQMKKAT 42
             MA  QRS +SFRRQGSSG+VW D  I+ +L+Q      K  T
Sbjct:     1 MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGET 41

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0010375 "stomatal complex patterning" evidence=IMP

TAIR|locus:2147710 AT5G20100 "AT5G20100" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 42/98 (42%), Positives = 55/98 (56%)

Query:     5 QRSEVSFRRQGSSGLVWQDAFISGDL-NQMRREQM-------KKATNSRELRHSQSDGSV 56
             QRS  SFRRQGSSGL+W D F+SG++ N  R+E           A  +  ++ S SDG  
Sbjct:     4 QRSTASFRRQGSSGLIWNDRFLSGEIRNDERQEDRCNDHRDGSMAATTATVKRSASDGGC 63

Query:    57 GMMQNRQSNGGIIFRTSKVLPDIDPPSPKVS--GCWFC 92
             G       +GG   R  ++ P +DPPSPK+S  GC FC
Sbjct:    64 G-------HGG---RLGELSPALDPPSPKISAVGCGFC 91

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037738 AT1G15400 "AT1G15400" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query:    36 EQMKKATNSRELRHSQSDGSV-GMMQNRQSNGGIIFR----TSKVLPDIDPPSPKVSGCW 90
             EQ+K      +LR  ++ G   G ++  +SNGG   R    T +V P +DPPSP++S C 
Sbjct:    55 EQVKPIDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCG 114

Query:    91 FCC 93
              CC
Sbjct:   115 -CC 116

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0010260 "organ senescence" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016863001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (114 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00