Citrus Sinensis ID: 048621

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccccccEEEEEEEccccccEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHcccccEEEEEEccccEEEcccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHccccccccHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccEEEEEcccccc
ccccccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEcccccccccEEEEEEEEccEEEEEEEccccccccEEEEEEccccccccEEEcccccccccccccHHHHHHccHHHHHHHHHHccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHEcccccEEEEEcccccccEcccccccEEEEEEcccccccccccccHHcHHHHHHHHHHHHHHHHcccccccccccHHcHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEcHcccc
marheetpvptlASLKEVYGEGSQLEEAQLRFGNLKSKFIQIfghapdvyarspgrvnligehidyegysvlpmaIRQDTIVAIRKHVSGETEKVLKIANVsdkyslctypaepdqeldlkhhqwghyficgYKGFYEYVKAkgldvgppvgldilvdgivptgsglsssaaFVCSSTIALMAAFGVEVPKKEIAQLTCECERyigaqsggmDQAISIMAKSGFaelidfnpiratdvqlpaggTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFagkngsddpfLAVKEflheepymAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFkdtvysnlsdedKLRRLGdlmndshhscsvlyecscpelEELVTVCRdngalgarltgagwGGCAVVLVKESIVP
marheetpvptlaslKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKhvsgetekvlkianvsdkySLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFagkngsddpFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP
MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAkdiekiieekLssifanssssLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP
***************************AQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKII*******************AAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKE****
*****ET**PTLASLKEVYG**S******LRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP
********VPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP
*******PVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKES***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query456 2.2.26 [Sep-21-2011]
Q9SEE5496 Galactokinase OS=Arabidop yes no 0.984 0.905 0.767 0.0
Q54DN6501 Galactokinase OS=Dictyost yes no 0.932 0.848 0.395 6e-87
Q5XIG6458 N-acetylgalactosamine kin yes no 0.853 0.849 0.438 1e-83
Q5R6J8458 N-acetylgalactosamine kin yes no 0.868 0.864 0.426 1e-82
Q01415458 N-acetylgalactosamine kin yes no 0.868 0.864 0.426 2e-82
Q68FH4458 N-acetylgalactosamine kin yes no 0.861 0.858 0.424 1e-81
P04385528 Galactokinase OS=Saccharo yes no 0.855 0.738 0.364 3e-63
O42821504 Galactokinase OS=Candida N/A no 0.905 0.819 0.358 6e-59
Q9HDU2519 Galactokinase OS=Schizosa yes no 0.914 0.803 0.338 1e-57
P13045520 Protein GAL3 OS=Saccharom no no 0.894 0.784 0.348 4e-57
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=1 SV=2 Back     alignment and function desciption
 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/452 (76%), Positives = 400/452 (88%), Gaps = 3/452 (0%)

Query: 1   MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLI 60
           MA+ EE  VP   SL+ VYGEGS L+EA  RF  LK+ F  +FG +P ++ARSPGRVNLI
Sbjct: 1   MAKPEEVSVPIFTSLEPVYGEGSLLQEATQRFDVLKANFNDVFGASPQLFARSPGRVNLI 60

Query: 61  GEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDL 120
           GEHIDYEGYSVLPMAIRQDTI+AIRK    E +K L+IANV+DKY++CTYPA+PDQE+DL
Sbjct: 61  GEHIDYEGYSVLPMAIRQDTIIAIRK---CEDQKQLRIANVNDKYTMCTYPADPDQEIDL 117

Query: 121 KHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIA 180
           K+H+WGHYFIC YKGF+EY K+KG+++G PVGLD+LVDGIVPTGSGLSSSAAFVCS+TIA
Sbjct: 118 KNHKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIA 177

Query: 181 LMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQL 240
           +MA FG    KKE+AQLTCECER+IG QSGGMDQAISIMAK+GFAELIDFNP+RATDV+L
Sbjct: 178 IMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKL 237

Query: 241 PAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDV 300
           P GG+FVIAHSLAES KAVTAA NYNNRVVECRLA+I+LG+KLGM+P+EAISKVKTLSDV
Sbjct: 238 PDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSDV 297

Query: 301 EGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAK 360
           EGLCV+FAG  GS DP LAVKE+L EEPY A++IEKI+EEKL SI  N  +SL VLNAA 
Sbjct: 298 EGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAAT 357

Query: 361 HYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPEL 420
           H+KLHQRAAHVYSEA+RV+ FKDTV SNLSDE+KL++LGDLMN+SH+SCSVLYECSCPEL
Sbjct: 358 HFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPEL 417

Query: 421 EELVTVCRDNGALGARLTGAGWGGCAVVLVKE 452
           EELV VC++NGALGARLTGAGWGGCAV LVKE
Sbjct: 418 EELVQVCKENGALGARLTGAGWGGCAVALVKE 449
Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1 Back     alignment and function description
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1 Back     alignment and function description
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1 Back     alignment and function description
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1 Back     alignment and function description
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1 Back     alignment and function description
>sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL1 PE=1 SV=4 Back     alignment and function description
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1 Back     alignment and function description
>sp|Q9HDU2|GAL1_SCHPO Galactokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gal1 PE=3 SV=1 Back     alignment and function description
>sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
255556438499 galactokinase, putative [Ricinus communi 1.0 0.913 0.817 0.0
209978716500 galactokinase [Cucumis melo] 1.0 0.912 0.791 0.0
224108774496 predicted protein [Populus trichocarpa] 0.993 0.913 0.796 0.0
449516960499 PREDICTED: galactokinase-like [Cucumis s 1.0 0.913 0.789 0.0
225432012499 PREDICTED: galactokinase [Vitis vinifera 1.0 0.913 0.802 0.0
224101523496 predicted protein [Populus trichocarpa] 0.993 0.913 0.782 0.0
84468320496 putative galactose kinase [Trifolium pra 0.993 0.913 0.791 0.0
356565073497 PREDICTED: galactokinase-like [Glycine m 0.993 0.911 0.787 0.0
356521747497 PREDICTED: galactokinase-like [Glycine m 0.993 0.911 0.783 0.0
53747925497 galactokinase [Pisum sativum] 0.993 0.911 0.781 0.0
>gi|255556438|ref|XP_002519253.1| galactokinase, putative [Ricinus communis] gi|223541568|gb|EEF43117.1| galactokinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/456 (81%), Positives = 420/456 (92%)

Query: 1   MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLI 60
           MA+HEE PVP  +SL+ VYG+GSQLEEAQLRF  LKSKF+++FGH PDV+ARSPGRVNLI
Sbjct: 1   MAKHEELPVPLYSSLEPVYGDGSQLEEAQLRFDKLKSKFLEVFGHPPDVFARSPGRVNLI 60

Query: 61  GEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDL 120
           GEHIDYEGYSVLPMAIRQDTI+ IRKH + E +KVL+IANV+DKY+LCTYPA+PDQE+DL
Sbjct: 61  GEHIDYEGYSVLPMAIRQDTIIGIRKHDAAEGQKVLRIANVNDKYALCTYPADPDQEIDL 120

Query: 121 KHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIA 180
           K+H+WGHYFICGYKGFYE+ K KG+DVG  VGLD++VDGIVPTGSGLSSSAAFVCS+TIA
Sbjct: 121 KNHRWGHYFICGYKGFYEFAKTKGVDVGALVGLDVIVDGIVPTGSGLSSSAAFVCSATIA 180

Query: 181 LMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQL 240
           +MAAF V  PKKEIAQLTCECER+IG QSGGMDQAIS+MA++GFAELIDFNPIRATDVQL
Sbjct: 181 IMAAFNVNFPKKEIAQLTCECERHIGTQSGGMDQAISVMAQTGFAELIDFNPIRATDVQL 240

Query: 241 PAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDV 300
           PAGGTFVIAHSLAES KAVTAATNYNNRVVECRLAAI+LG+KLGMKPQ+AI KVKTLSDV
Sbjct: 241 PAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLAAILLGVKLGMKPQDAILKVKTLSDV 300

Query: 301 EGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAK 360
           EGLCV+FAG   S DP +AVKEFL EEPY A++IEKI EE LSSIF+NS +SLDVL AAK
Sbjct: 301 EGLCVSFAGTRDSADPAVAVKEFLKEEPYSAEEIEKITEEDLSSIFSNSPTSLDVLKAAK 360

Query: 361 HYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPEL 420
           H+KLHQRAAHVYSEAKRV+AFKDTV S LSDEDKL++LGDLMN+SH+SCS+LYECSCPEL
Sbjct: 361 HFKLHQRAAHVYSEAKRVHAFKDTVSSKLSDEDKLKKLGDLMNESHYSCSILYECSCPEL 420

Query: 421 EELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP 456
           EELV VCR++GALGARLTGAGWGGCAV LVKE+IVP
Sbjct: 421 EELVKVCREHGALGARLTGAGWGGCAVALVKEAIVP 456

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|209978716|gb|ACJ04703.1| galactokinase [Cucumis melo] Back     alignment and taxonomy information
>gi|224108774|ref|XP_002314964.1| predicted protein [Populus trichocarpa] gi|222864004|gb|EEF01135.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449516960|ref|XP_004165514.1| PREDICTED: galactokinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225432012|ref|XP_002279647.1| PREDICTED: galactokinase [Vitis vinifera] gi|296083222|emb|CBI22858.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101523|ref|XP_002312315.1| predicted protein [Populus trichocarpa] gi|222852135|gb|EEE89682.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|84468320|dbj|BAE71243.1| putative galactose kinase [Trifolium pratense] Back     alignment and taxonomy information
>gi|356565073|ref|XP_003550769.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|356521747|ref|XP_003529513.1| PREDICTED: galactokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|53747925|emb|CAF34022.1| galactokinase [Pisum sativum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
TAIR|locus:2084344496 GALK [Arabidopsis thaliana (ta 0.984 0.905 0.743 2.3e-181
UNIPROTKB|F1P1D1461 GALK2 "Uncharacterized protein 0.866 0.856 0.440 2.9e-80
DICTYBASE|DDB_G0292112501 galK "galactokinase" [Dictyost 0.940 0.856 0.392 1.2e-79
UNIPROTKB|F1SQG6458 GALK2 "Uncharacterized protein 0.896 0.893 0.423 2.6e-79
UNIPROTKB|E2RDA6458 GALK2 "Uncharacterized protein 0.875 0.871 0.429 4.2e-79
RGD|1308691458 Galk2 "galactokinase 2" [Rattu 0.864 0.860 0.432 1.1e-78
UNIPROTKB|F1MFK7447 GALK2 "Uncharacterized protein 0.861 0.879 0.424 3e-78
MGI|MGI:1917226458 Galk2 "galactokinase 2" [Mus m 0.861 0.858 0.426 1.3e-77
UNIPROTKB|Q01415458 GALK2 "N-acetylgalactosamine k 0.875 0.871 0.425 7.1e-77
ZFIN|ZDB-GENE-041114-143457 galk2 "galactokinase 2" [Danio 0.859 0.857 0.430 9e-77
TAIR|locus:2084344 GALK [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1760 (624.6 bits), Expect = 2.3e-181, P = 2.3e-181
 Identities = 336/452 (74%), Positives = 385/452 (85%)

Query:     1 MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLI 60
             MA+ EE  VP   SL+ VYGEGS L+EA  RF  LK+ F  +FG +P ++ARSPGRVNLI
Sbjct:     1 MAKPEEVSVPIFTSLEPVYGEGSLLQEATQRFDVLKANFNDVFGASPQLFARSPGRVNLI 60

Query:    61 GEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDL 120
             GEHIDYEGYSVLPMAIRQDTI+AIRK    E +K L+IANV+DKY++CTYPA+PDQE+DL
Sbjct:    61 GEHIDYEGYSVLPMAIRQDTIIAIRKC---EDQKQLRIANVNDKYTMCTYPADPDQEIDL 117

Query:   121 KHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIA 180
             K+H+WGHYFIC YKGF+EY K+KG+++G PVGLD+LVDGIVPTGSGLSSSAAFVCS+TIA
Sbjct:   118 KNHKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIA 177

Query:   181 LMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQL 240
             +MA FG    KKE+AQLTCECER+IG QSGGMDQAISIMAK+GFAELIDFNP+RATDV+L
Sbjct:   178 IMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKL 237

Query:   241 PAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDV 300
             P GG+FVIAHSLAES KAVTAA NYNNRVVECRLA+I+LG+KLGM+P+EAISKVKTLSDV
Sbjct:   238 PDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSDV 297

Query:   301 EGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAXXXXXXXXXXLXXXXXXXXXXLDVLNAAK 360
             EGLCV+FAG  GS DP LAVKE+L EEPY A          L          L VLNAA 
Sbjct:   298 EGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAAT 357

Query:   361 HYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPEL 420
             H+KLHQRAAHVYSEA+RV+ FKDTV SNLSDE+KL++LGDLMN+SH+SCSVLYECSCPEL
Sbjct:   358 HFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPEL 417

Query:   421 EELVTVCRDNGALGARLTGAGWGGCAVVLVKE 452
             EELV VC++NGALGARLTGAGWGGCAV LVKE
Sbjct:   418 EELVQVCKENGALGARLTGAGWGGCAVALVKE 449
GO:0004335 "galactokinase activity" evidence=IEA;IGI;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006012 "galactose metabolic process" evidence=IEA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=IEA
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0046835 "carbohydrate phosphorylation" evidence=IEA;IDA
GO:0005829 "cytosol" evidence=IDA
UNIPROTKB|F1P1D1 GALK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292112 galK "galactokinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1SQG6 GALK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDA6 GALK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1308691 Galk2 "galactokinase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MFK7 GALK2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1917226 Galk2 "galactokinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q01415 GALK2 "N-acetylgalactosamine kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-143 galk2 "galactokinase 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P09608GAL1_KLULA2, ., 7, ., 1, ., 60.33330.90130.8170yesno
Q01415GALK2_HUMAN2, ., 7, ., 1, ., 1, 5, 70.42690.86840.8646yesno
Q5R6J8GALK2_PONAB2, ., 7, ., 1, ., 1, 5, 70.42690.86840.8646yesno
Q9SEE5GALK1_ARATH2, ., 7, ., 1, ., 60.76760.98460.9052yesno
Q9HDU2GAL1_SCHPO2, ., 7, ., 1, ., 60.33830.91440.8034yesno
Q68FH4GALK2_MOUSE2, ., 7, ., 1, ., 1, 5, 70.42410.86180.8580yesno
Q54DN6GALK_DICDI2, ., 7, ., 1, ., 60.39570.93200.8483yesno
Q5XIG6GALK2_RAT2, ., 7, ., 1, ., 1, 5, 70.43890.85300.8493yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.60.991
3rd Layer2.7.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_X0656
galactokinase (EC-2.7.1.6) (496 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00061661
galactose-1-phosphate uridylyltransferase (EC-2.7.7.10) (348 aa)
•  • •• 0.943
estExt_fgenesh4_pm.C_LG_III0678
hypothetical protein (1114 aa)
• •  •• 0.932
fgenesh4_pg.C_LG_I000259
hypothetical protein (1110 aa)
• •  •• 0.931
gw1.XIX.1583.1
alpha-galactosidase (380 aa)
     •  0.899
gw1.X.3030.1
alpha-galactosidase (EC-2.4.1.67) (369 aa)
     •  0.899
gw1.44.267.1
hypothetical protein (643 aa)
     •  0.899
fgenesh4_pm.C_LG_IV000085
hypothetical protein (379 aa)
     •  0.899
fgenesh4_pg.C_scaffold_164000005
alpha-galactosidase (EC-3.2.1.22) (367 aa)
     •  0.899
eugene3.00101110
alpha-galactosidase (EC-3.2.1.22) (386 aa)
     •  0.899
gw1.VI.1302.1
galactokinase (EC-2.7.1.6) (413 aa)
  •  • •0.841

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
PLN02521497 PLN02521, PLN02521, galactokinase 0.0
COG0153390 COG0153, GalK, Galactokinase [Carbohydrate transpo 3e-77
TIGR00131386 TIGR00131, gal_kin, galactokinase 4e-76
PRK05322387 PRK05322, PRK05322, galactokinase; Provisional 2e-51
PRK05101382 PRK05101, PRK05101, galactokinase; Provisional 6e-45
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 5e-43
pfam1050952 pfam10509, GalKase_gal_bdg, Galactokinase galactos 1e-24
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 2e-18
PLN02865423 PLN02865, PLN02865, galactokinase 5e-18
pfam0028867 pfam00288, GHMP_kinases_N, GHMP kinases N terminal 2e-13
PTZ00298328 PTZ00298, PTZ00298, mevalonate kinase; Provisional 1e-12
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 2e-11
PTZ00290468 PTZ00290, PTZ00290, galactokinase; Provisional 2e-11
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 5e-11
PRK00555363 PRK00555, PRK00555, galactokinase; Provisional 2e-10
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 3e-10
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 8e-10
pfam0854486 pfam08544, GHMP_kinases_C, GHMP kinases C terminal 4e-09
PRK03926302 PRK03926, PRK03926, mevalonate kinase; Provisional 3e-08
PTZ00290468 PTZ00290, PTZ00290, galactokinase; Provisional 2e-06
PRK03926302 PRK03926, PRK03926, mevalonate kinase; Provisional 8e-06
COG1685278 COG1685, COG1685, Archaeal shikimate kinase [Amino 6e-04
COG2605333 COG2605, COG2605, Predicted kinase related to gala 0.001
COG4542293 COG4542, PduX, Protein involved in propanediol uti 0.001
COG2605333 COG2605, COG2605, Predicted kinase related to gala 0.002
PLN02677387 PLN02677, PLN02677, mevalonate kinase 0.004
>gnl|CDD|215285 PLN02521, PLN02521, galactokinase Back     alignment and domain information 
 Score =  857 bits (2217), Expect = 0.0
 Identities = 343/456 (75%), Positives = 405/456 (88%), Gaps = 3/456 (0%)

Query: 1   MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLI 60
           MA+HEE PVP  +SL+ VYG+GS LEEA+LR+  LK+ F++++G  PD++ARSPGRVNLI
Sbjct: 1   MAKHEEEPVPVFSSLEPVYGDGSLLEEARLRYARLKAAFVEVYGAKPDLFARSPGRVNLI 60

Query: 61  GEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDL 120
           GEHIDYEGYSVLPMAIRQDTIVAIR+    E  K L+IANV+DKY+ CT+PA+PDQE+DL
Sbjct: 61  GEHIDYEGYSVLPMAIRQDTIVAIRRA---EGSKKLRIANVNDKYTTCTFPADPDQEVDL 117

Query: 121 KHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIA 180
            +H+WG+YFICGYKG +E++K+KG+DVGPPVGLD++VDG VPTGSGLSSSAA VCS+ IA
Sbjct: 118 ANHKWGNYFICGYKGVFEFLKSKGVDVGPPVGLDVVVDGTVPTGSGLSSSAALVCSAAIA 177

Query: 181 LMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQL 240
           +MAA G+   KKE+AQ TC+CER+IG QSGGMDQAISIMA+ G A+LIDFNP+RATDVQL
Sbjct: 178 IMAALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQL 237

Query: 241 PAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDV 300
           PAGGTFVIA+SLAES KAVTAATNYNNRVVECRLAAIVL +KLGM  +EAISKVKTLSDV
Sbjct: 238 PAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKLGMSAEEAISKVKTLSDV 297

Query: 301 EGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAK 360
           EGLCV+FAG +GS DP +AVKE LHE PY A++IE+I+ E L+SIF NS +SL VL AAK
Sbjct: 298 EGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAK 357

Query: 361 HYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPEL 420
           H+KLHQRA HVYSEAKRV+AF+DTV S+LS+E+KL++LGDLMN+SH+SCSVLYECSCPEL
Sbjct: 358 HFKLHQRAVHVYSEAKRVHAFRDTVSSSLSEEEKLKKLGDLMNESHYSCSVLYECSCPEL 417

Query: 421 EELVTVCRDNGALGARLTGAGWGGCAVVLVKESIVP 456
           EELV VCRDNGALGARLTGAGWGGCAV LVKE+IVP
Sbjct: 418 EELVKVCRDNGALGARLTGAGWGGCAVALVKEAIVP 453

Length = 497
>gnl|CDD|223231 COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|232841 TIGR00131, gal_kin, galactokinase Back     alignment and domain information
>gnl|CDD|235407 PRK05322, PRK05322, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|179937 PRK05101, PRK05101, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|204502 pfam10509, GalKase_gal_bdg, Galactokinase galactose-binding signature Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|215466 PLN02865, PLN02865, galactokinase Back     alignment and domain information
>gnl|CDD|215839 pfam00288, GHMP_kinases_N, GHMP kinases N terminal domain Back     alignment and domain information
>gnl|CDD|240351 PTZ00298, PTZ00298, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|240347 PTZ00290, PTZ00290, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|179063 PRK00555, PRK00555, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|219894 pfam08544, GHMP_kinases_C, GHMP kinases C terminal Back     alignment and domain information
>gnl|CDD|179677 PRK03926, PRK03926, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|240347 PTZ00290, PTZ00290, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|179677 PRK03926, PRK03926, mevalonate kinase; Provisional Back     alignment and domain information
>gnl|CDD|224599 COG1685, COG1685, Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|225325 COG2605, COG2605, Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>gnl|CDD|226917 COG4542, PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|225325 COG2605, COG2605, Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>gnl|CDD|215363 PLN02677, PLN02677, mevalonate kinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 456
PLN02521497 galactokinase 100.0
COG0153390 GalK Galactokinase [Carbohydrate transport and met 100.0
PLN02865423 galactokinase 100.0
PTZ00290468 galactokinase; Provisional 100.0
PRK05101382 galactokinase; Provisional 100.0
PRK05322387 galactokinase; Provisional 100.0
TIGR00131386 gal_kin galactokinase. The galactokinases found by 100.0
KOG0631489 consensus Galactokinase [Carbohydrate transport an 100.0
PRK00555363 galactokinase; Provisional 100.0
PRK03817351 galactokinase; Provisional 100.0
COG1577307 ERG12 Mevalonate kinase [Lipid metabolism] 100.0
TIGR01220358 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-typ 100.0
PLN02677387 mevalonate kinase 100.0
TIGR00549273 mevalon_kin mevalonate kinase. Paracoccus exhibits 100.0
PRK13412974 fkp bifunctional fucokinase/L-fucose-1-P-guanylylt 100.0
KOG1511397 consensus Mevalonate kinase MVK/ERG12 [Lipid trans 100.0
PTZ00298328 mevalonate kinase; Provisional 100.0
PRK03926302 mevalonate kinase; Provisional 100.0
COG2605333 Predicted kinase related to galactokinase and meva 100.0
TIGR01219454 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, 99.97
PRK00128286 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.95
PLN02451370 homoserine kinase 99.94
PRK02534312 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.93
TIGR00154293 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kin 99.93
PRK01212301 homoserine kinase; Provisional 99.91
COG0083299 ThrB Homoserine kinase [Amino acid transport and m 99.91
TIGR00191302 thrB homoserine kinase. P.aeruginosa homoserine ki 99.91
TIGR01920261 Shik_kin_archae shikimate kinase. This model repre 99.91
PRK03188300 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.89
PRK01123282 shikimate kinase; Provisional 99.87
PTZ00299336 homoserine kinase; Provisional 99.86
PRK14614280 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.85
PRK14608290 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.85
PRK14609269 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.85
PRK14611275 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.83
PRK14616287 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.82
PRK14612276 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.82
PRK14615296 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.82
PRK14613297 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.78
PRK00343271 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.78
TIGR00144324 beta_RFAP_syn beta-RFAP synthase. This protein fam 99.7
PRK14610283 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.65
PRK00650288 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.63
PF1050952 GalKase_gal_bdg: Galactokinase galactose-binding s 99.63
KOG4644948 consensus L-fucose kinase [Carbohydrate transport 99.61
COG1947289 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-p 99.59
PF0028867 GHMP_kinases_N: GHMP kinases N terminal domain; In 99.57
PRK05905258 hypothetical protein; Provisional 99.5
COG3890337 ERG8 Phosphomevalonate kinase [Lipid metabolism] 99.46
COG1685278 Archaeal shikimate kinase [Amino acid transport an 99.43
TIGR01240305 mevDPdecarb diphosphomevalonate decarboxylase. Alt 99.41
KOG4519459 consensus Phosphomevalonate kinase [Lipid transpor 99.34
PRK04181257 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.33
PF0854485 GHMP_kinases_C: GHMP kinases C terminal ; InterPro 99.21
COG1907312 Predicted archaeal sugar kinases [General function 99.11
COG4542293 PduX Protein involved in propanediol utilization, 99.05
COG1829283 Predicted archaeal kinase (sugar kinase superfamil 98.81
PLN02407343 diphosphomevalonate decarboxylase 98.67
KOG1537355 consensus Homoserine kinase [Amino acid transport 98.54
COG3407329 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid 98.48
KOG2833395 consensus Mevalonate pyrophosphate decarboxylase [ 98.45
>PLN02521 galactokinase Back     alignment and domain information 
Probab=100.00  E-value=3.8e-81  Score=649.44  Aligned_cols=452  Identities=76%  Similarity=1.226  Sum_probs=388.0

Q ss_pred             CCCCCCCCccccccchhhcCCchhhHHHHHHHHHHHHHHHHHhCCCCCEEEEecceecccccccccCCCeeeeeecccce
Q 048621            1 MARHEETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDT   80 (456)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~fg~~~~~~~~APgri~L~GEh~d~~G~~~l~~AI~~~~   80 (456)
                      |..|++-+||+|++|..+|.+.+.+++++.|+.++.+.|.+.||.+|++.++|||||+|+|||+||+|++||++||++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~F~~~fg~~p~~~~~APGRVnLiGEHtDy~gg~vLp~AI~~~~   80 (497)
T PLN02521          1 MAKHEEEPVPVFSSLEPVYGDGSLLEEARLRYARLKAAFVEVYGAKPDLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDT   80 (497)
T ss_pred             CCCCCCCCcceechhHHhcCCcchhHHHHHHHHHHHHHHHHHHCCCCCEEEECCceEEEeccceeecCCeEEEEEEcCcE
Confidence            77799999999999999999998888899999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecccCCCCCeEEEEecCCCCCceeeeCCCCccccccCCCcchhhhhHHHHHHHHHHHcCCCCCCCCceEEEEEec
Q 048621           81 IVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGI  160 (456)
Q Consensus        81 ~v~v~~~~~~~~~~~i~i~s~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~i~~v~~~l~~~g~~~~~~~g~~i~i~S~  160 (456)
                      +|.++++   +++..+++.+.+..+....|+++.....+.....|.+|+.+++++++..+.+.+.....+.||++.|.|+
T Consensus        81 ~v~~~~~---~~~~~i~i~s~~~~~~~~~~~~~~~~~~~~~~~~W~nYv~~~~~gv~~~l~~~~~~~~~~~g~~i~i~s~  157 (497)
T PLN02521         81 IVAIRRA---EGSKKLRIANVNDKYTTCTFPADPDQEVDLANHKWGNYFICGYKGVFEFLKSKGVDVGPPVGLDVVVDGT  157 (497)
T ss_pred             EEEEEEc---CCCCEEEEEECCCCCCceeeecCcccccccccccHHHHHHHHHHHHHHHHHHhccccCCCCCeEEEEecC
Confidence            9999998   5336788887654443334444321111224457999999999999999987765311245999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhhCCCCCcchhhhhhhccCCcEEEeecCCCceeeccC
Q 048621          161 VPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQL  240 (456)
Q Consensus       161 IP~g~GLGSSAA~~vA~~~al~~l~g~~ls~~el~~la~~~E~~~~~~~g~~D~~~s~~Gg~~~~~~i~~~~~~~~~~~~  240 (456)
                      ||+|+|||||||++||++.|++.+++.++++++++++|+.+|+++|++||+|||+++++|+.|+++++||+++.++++++
T Consensus       158 IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~~~g~~~g~mDq~as~~g~~g~al~~d~~~l~~~~v~~  237 (497)
T PLN02521        158 VPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCERHIGTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQL  237 (497)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhCccCCCCChHHHHHHHhcCCCcEEEEecCCCceEEeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEecCCccccccccccchhhHHHHHHHHHHHHhHHhCCCcchhhcccccccchhhhhhhhcCCCCCCchhHHH
Q 048621          241 PAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAV  320 (456)
Q Consensus       241 p~~~~~ll~~s~~~~~~~~~~~~~yn~R~~e~~~a~~~l~~~~~~~~~~~~~~~~~Lr~~~~~~~~~~g~~~~~~~~~~v  320 (456)
                      |.++.|+|++|++++.|+.++++.||.|++||+.|+++|+++++++.......+.+|||+.+++..+.+.....++...+
T Consensus       238 p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~~~~~~~~~~~~~~~~~Lrd~~~~~~~~~~~~~~~~~~~~~  317 (497)
T PLN02521        238 PAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKLGMSAEEAISKVKTLSDVEGLCVSFAGSHGSSDPAVAV  317 (497)
T ss_pred             CCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHHhhcCCcchhcccccCCHHHHHHHHhhhcccccchhhHHHh
Confidence            98999999999999999999999999999999999999998888754333334668999876544445555556678888


Q ss_pred             HhhhccCCCCHHHHHHHHhhhhhhhhhccCCchhhhhhhhhhHHHHHHHHHHHHHhhHHHHHHHHhcCCCChHHHHHHHH
Q 048621          321 KEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGD  400 (456)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~E~~rv~~~~~al~~~d~~~~~~~~lG~  400 (456)
                      +..+...+|+.++++++++..+.++.++..+....+...++|.+++|++|+++|+.||.+|+++|+++++.+.++..||+
T Consensus       318 ~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hvv~E~~RV~~~~~al~~~~~~~~~~~~lg~  397 (497)
T PLN02521        318 KELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHVYSEAKRVHAFRDTVSSSLSEEEKLKKLGD  397 (497)
T ss_pred             hhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhheecHHHHHHHHHHHHHhcCccchHHHHHHH
Confidence            88888889999999988775555555443333333334667789999999999999999999999987544556999999


Q ss_pred             HHHHhHHhhhhhcCCCcHHHHHHHHHHHhCCCceeeecccCCcceEEEEecCCCC
Q 048621          401 LMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAVVLVKESIV  455 (456)
Q Consensus       401 Lm~~sh~~lr~l~~vS~peld~lv~~a~~~GalGaKltGaG~GG~~i~L~~~~~~  455 (456)
                      ||+++|.+||++|+||||++|.|+++|++.|++||||||||||||+|+|++++.+
T Consensus       398 lm~~sh~slr~~~~vS~~elD~lv~~a~~~Ga~GaRltGaG~GG~~i~lv~~~~~  452 (497)
T PLN02521        398 LMNESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGAGWGGCAVALVKEAIV  452 (497)
T ss_pred             HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCCcEEEECCCCCCeEEEEEECHHHH
Confidence            9999999999999999999999999999999999999999999999999987643

>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02865 galactokinase Back     alignment and domain information
>PTZ00290 galactokinase; Provisional Back     alignment and domain information
>PRK05101 galactokinase; Provisional Back     alignment and domain information
>PRK05322 galactokinase; Provisional Back     alignment and domain information
>TIGR00131 gal_kin galactokinase Back     alignment and domain information
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK00555 galactokinase; Provisional Back     alignment and domain information
>PRK03817 galactokinase; Provisional Back     alignment and domain information
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch Back     alignment and domain information
>PLN02677 mevalonate kinase Back     alignment and domain information
>TIGR00549 mevalon_kin mevalonate kinase Back     alignment and domain information
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional Back     alignment and domain information
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism] Back     alignment and domain information
>PTZ00298 mevalonate kinase; Provisional Back     alignment and domain information
>PRK03926 mevalonate kinase; Provisional Back     alignment and domain information
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch Back     alignment and domain information
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PLN02451 homoserine kinase Back     alignment and domain information
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Back     alignment and domain information
>PRK01212 homoserine kinase; Provisional Back     alignment and domain information
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00191 thrB homoserine kinase Back     alignment and domain information
>TIGR01920 Shik_kin_archae shikimate kinase Back     alignment and domain information
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK01123 shikimate kinase; Provisional Back     alignment and domain information
>PTZ00299 homoserine kinase; Provisional Back     alignment and domain information
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00144 beta_RFAP_syn beta-RFAP synthase Back     alignment and domain information
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry [] Back     alignment and domain information
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] Back     alignment and domain information
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2 Back     alignment and domain information
>PRK05905 hypothetical protein; Provisional Back     alignment and domain information
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism] Back     alignment and domain information
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase Back     alignment and domain information
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism] Back     alignment and domain information
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2 Back     alignment and domain information
>COG1907 Predicted archaeal sugar kinases [General function prediction only] Back     alignment and domain information
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only] Back     alignment and domain information
>PLN02407 diphosphomevalonate decarboxylase Back     alignment and domain information
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism] Back     alignment and domain information
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
2a2d_A478 X-Ray Structure Of Human N-Acetyl Galactosamine Kin 2e-80
3v5r_A505 Crystal Structure Of The Unliganded Form Of Gal3p L 1e-56
3v2u_C520 Crystal Structure Of The Yeast Gal Regulon Complex 1e-56
2aj4_A548 Crystal Structure Of Saccharomyces Cerevisiae Galac 1e-40
2aj4_A548 Crystal Structure Of Saccharomyces Cerevisiae Galac 1e-21
1pie_A419 Crystal Structure Of Lactococcus Lactis Galactokina 4e-24
1wuu_A399 Crystal Structure Of Human Galactokinase Complexed 3e-15
2cz9_A350 Crystal Structure Of Galactokinase From Pyrococcus 6e-11
2cz9_A350 Crystal Structure Of Galactokinase From Pyrococcus 3e-07
2hfu_A332 Crystal Structure Of L. Major Mevalonate Kinase In 3e-10
2hfs_A332 Crystal Structure Of L. Major Mevalonate Kinase Len 2e-09
1s4e_A352 Pyrococcus Furiosus Galactokinase In Complex With G 1e-08
1s4e_A352 Pyrococcus Furiosus Galactokinase In Complex With G 1e-07
1kkh_A317 Crystal Structure Of The Methanococcus Jannaschii M 1e-07
1vis_A324 Crystal Structure Of Mevalonate Kinase Length = 324 1e-07
2x7i_A308 Crystal Structure Of Mevalonate Kinase From Methici 6e-05
4hac_B321 Crystal Structure Of The Mevalonate Kinase From An 8e-04
4hac_A321 Crystal Structure Of The Mevalonate Kinase From An 8e-04
>pdb|2A2D|A Chain A, X-Ray Structure Of Human N-Acetyl Galactosamine Kinase Complexed With Mn-Amppnp And N-Acetyl Glactosamine Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/429 (41%), Positives = 249/429 (58%), Gaps = 31/429 (7%)
Query: 31  RFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSG 90
           R   LK  F   FG  P  Y R+PGRVN+IGEHIDY GYSVLPMA+ QD ++A+    + 
Sbjct: 38  RLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKT- 96
Query: 91  ETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPP 150
                L++AN +  Y   +  A  + ++D     W +YF+CG KG  E+     L     
Sbjct: 97  ---YALQLANTNPLYPDFSTSAN-NIQIDKTKPLWHNYFLCGLKGIQEHFGLSNL----- 147
Query: 151 VGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSG 210
            G++ LVDG +P  SGLSSS+A VC + +  +   G  + K E+A++  + ERYIG + G
Sbjct: 148 TGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGG 207
Query: 211 GMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVV 270
           GMDQ+IS +A+ G A+LI+F+P+RATDV+LP+G  FVIA+S  E  KA T  +++N RV+
Sbjct: 208 GMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAAT--SHFNIRVM 265
Query: 271 ECRLAAIVLGIKLGMKPQEAISKVKTLSDVEG-LCVAFAGKNGSDDPFLAVKEFLHEEPY 329
           ECRLAA +L     ++      KV  L +V+  L ++       ++  L  ++ LH EPY
Sbjct: 266 ECRLAAKLLAKYKSLQ----WDKVLRLEEVQAKLGISL------EEMLLVTEDALHPEPY 315
Query: 330 MAXXXXXXXXXXLXXXXXXXXX--XLDVLNAAKHYKLHQRAAHVYSEAKRVYAFKDTVYS 387
                       L             DVL     +KL+QRA HVYSEA RV  FK     
Sbjct: 316 NPEEICRCLGISLEELRTQILSPNTQDVL----IFKLYQRAKHVYSEAARVLQFKKICEE 371
Query: 388 NLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAV 447
             + E+ ++ LG+LMN SH SC  +YECSCPEL++LV +CR  GA G+RLTGAGWGGC V
Sbjct: 372 --APENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTV 429
Query: 448 VLVKESIVP 456
            +V    +P
Sbjct: 430 SMVPADKLP 438
>pdb|3V5R|A Chain A, Crystal Structure Of The Unliganded Form Of Gal3p Length = 505 Back     alignment and structure
>pdb|3V2U|C Chain C, Crystal Structure Of The Yeast Gal Regulon Complex Of The Repressor, Gal80p, And The Transducer, Gal3p, With Galactose And Atp Length = 520 Back     alignment and structure
>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Galactokinase In Complex With Galactose And Mg:amppnp Length = 548 Back     alignment and structure
>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Galactokinase In Complex With Galactose And Mg:amppnp Length = 548 Back     alignment and structure
>pdb|1PIE|A Chain A, Crystal Structure Of Lactococcus Lactis Galactokinase Complexed With Galactose Length = 419 Back     alignment and structure
>pdb|1WUU|A Chain A, Crystal Structure Of Human Galactokinase Complexed With Mgamppnp And Galactose Length = 399 Back     alignment and structure
>pdb|2CZ9|A Chain A, Crystal Structure Of Galactokinase From Pyrococcus Horikoshi Length = 350 Back     alignment and structure
>pdb|2CZ9|A Chain A, Crystal Structure Of Galactokinase From Pyrococcus Horikoshi Length = 350 Back     alignment and structure
>pdb|2HFU|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase In Complex With R-Mevalonate Length = 332 Back     alignment and structure
>pdb|2HFS|A Chain A, Crystal Structure Of L. Major Mevalonate Kinase Length = 332 Back     alignment and structure
>pdb|1S4E|A Chain A, Pyrococcus Furiosus Galactokinase In Complex With Galactose, Adp And Magnesium Length = 352 Back     alignment and structure
>pdb|1S4E|A Chain A, Pyrococcus Furiosus Galactokinase In Complex With Galactose, Adp And Magnesium Length = 352 Back     alignment and structure
>pdb|1KKH|A Chain A, Crystal Structure Of The Methanococcus Jannaschii Mevalonate Kinase Length = 317 Back     alignment and structure
>pdb|1VIS|A Chain A, Crystal Structure Of Mevalonate Kinase Length = 324 Back     alignment and structure
>pdb|2X7I|A Chain A, Crystal Structure Of Mevalonate Kinase From Methicillin- Resistant Staphylococcus Aureus Mrsa252 Length = 308 Back     alignment and structure
>pdb|4HAC|B Chain B, Crystal Structure Of The Mevalonate Kinase From An Archaeon Methanosarcina Mazei Length = 321 Back     alignment and structure
>pdb|4HAC|A Chain A, Crystal Structure Of The Mevalonate Kinase From An Archaeon Methanosarcina Mazei Length = 321 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 1e-147
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 1e-129
1pie_A419 Galactokinase; galactose, galactosemia, transferas 8e-88
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 2e-86
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 2e-82
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 4e-36
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 7e-20
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 2e-31
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 5e-20
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 9e-28
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 1e-21
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 1e-27
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 3e-26
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 4e-20
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 7e-23
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 4e-18
3k17_A365 LIN0012 protein; protein structure initiative II(P 2e-17
3k17_A365 LIN0012 protein; protein structure initiative II(P 5e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-16
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 2e-12
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 2e-07
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Length = 478 Back     alignment and structure
 Score =  427 bits (1098), Expect = e-147
 Identities = 181/453 (39%), Positives = 256/453 (56%), Gaps = 35/453 (7%)

Query: 14  SLKEVYGEGSQLEEA----------QLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEH 63
           S + +Y +G    E+            R   LK  F   FG  P  Y R+PGRVN+IGEH
Sbjct: 11  SSENLYFQGHMATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEH 70

Query: 64  IDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHH 123
           IDY GYSVLPMA+ QD ++A+           L++AN +  Y   +  A  + ++D    
Sbjct: 71  IDYCGYSVLPMAVEQDVLIAVEPV----KTYALQLANTNPLYPDFSTSAN-NIQIDKTKP 125

Query: 124 QWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMA 183
            W +YF+CG KG  E+       +    G++ LVDG +P  SGLSSS+A VC + +  + 
Sbjct: 126 LWHNYFLCGLKGIQEH-----FGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLT 180

Query: 184 AFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAG 243
             G  + K E+A++  + ERYIG + GGMDQ+IS +A+ G A+LI+F+P+RATDV+LP+G
Sbjct: 181 VLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSG 240

Query: 244 GTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGL 303
             FVIA+S  E  KA T+   +N RV+ECRLAA +L     ++      KV  L +V+  
Sbjct: 241 AVFVIANSCVEMNKAATSH--FNIRVMECRLAAKLLAKYKSLQWD----KVLRLEEVQAK 294

Query: 304 CVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYK 363
                     ++  L  ++ LH EPY  ++I + +   L  +     S          +K
Sbjct: 295 L-----GISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQD--VLIFK 347

Query: 364 LHQRAAHVYSEAKRVYAFKDTVYSNLSDEDKLRRLGDLMNDSHHSCSVLYECSCPELEEL 423
           L+QRA HVYSEA RV  FK       + E+ ++ LG+LMN SH SC  +YECSCPEL++L
Sbjct: 348 LYQRAKHVYSEAARVLQFKKICEE--APENMVQLLGELMNQSHMSCRDMYECSCPELDQL 405

Query: 424 VTVCRDNGALGARLTGAGWGGCAVVLVKESIVP 456
           V +CR  GA G+RLTGAGWGGC V +V    +P
Sbjct: 406 VDICRKFGAQGSRLTGAGWGGCTVSMVPADKLP 438
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Length = 520 Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Length = 419 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Length = 399 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Length = 350 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Length = 395 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query456
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 100.0
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 100.0
1pie_A419 Galactokinase; galactose, galactosemia, transferas 100.0
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 100.0
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 100.0
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 100.0
3gon_A335 Phosphomevalonate kinase; GHMP kinase superfamily, 100.0
3k17_A365 LIN0012 protein; protein structure initiative II(P 100.0
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 100.0
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 100.0
4hac_A321 Mevalonate kinase; GHMP, ATP binding, phosphorylat 100.0
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 100.0
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 100.0
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 100.0
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 100.0
1h72_C296 HK, homoserine kinase; transferase, threonine bios 99.97
2v8p_A271 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.94
3pyf_A306 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.94
3hul_A298 HSK, HK, homoserine kinase; structural genomics, p 99.93
2gs8_A317 Mevalonate pyrophosphate decarboxylase; streptococ 99.92
2ww4_A283 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 99.91
3qt5_A332 Mevalonate diphosphate decarboxylase; GHMP kinase 99.9
1uek_A275 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.89
1fi4_A416 Mevalonate 5-diphosphate decarboxylase; mixed alph 99.82
2hke_A380 Diphosphomevalonate decarboxylase, putative; meval 99.68
3lto_A323 Mevalonate diphosphate decarboxylase; protein stru 99.65
3f0n_A414 Mevalonate pyrophosphate decarboxylase; cholestero 99.5
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Back     alignment and structure
Probab=100.00  E-value=9.3e-79  Score=635.51  Aligned_cols=436  Identities=34%  Similarity=0.561  Sum_probs=364.5

Q ss_pred             CCCccccccchhhcCCchhhHHHHHHHHHHHHHHHHHhCCCCCEEEEecceecccccccccCCCeeeeeecccceEEEEE
Q 048621            6 ETPVPTLASLKEVYGEGSQLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIR   85 (456)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~fg~~~~~~~~APgri~L~GEh~d~~G~~~l~~AI~~~~~v~v~   85 (456)
                      .||||++.+|.+ |.+.    ++++||.++++.|++.||.+|+++++|||||+|+|||+||+||+||++||+++++++++
T Consensus         2 ~~~vp~~~~~~~-~~~~----~~~~R~~~l~~~F~~~fg~~p~~v~~APGRVnLiGEHtDyngG~VLp~AI~~~~~vav~   76 (520)
T 3v2u_C            2 NTNVPIFSSPVR-DLPR----SFEQKHLAVVDAFFQTYHVKPDFIARSPGRVNLIGEHIDYCDFSVLPLAIDVDMLCAVK   76 (520)
T ss_dssp             CCBCCEESCC----CCH----HHHHHHHHHHHHHHHHHSSCCSEEEEEEEEEEEECTTCGGGTCCBEEEEEEEEEEEEEE
T ss_pred             CCCCceeccccc-cCcH----HHHHHHHHHHHHHHHHhCCCCCEEEEcceeEEEeccCeeeCCCEEEEEEeecceEEEEE
Confidence            589999999999 9874    46789999999999999999999999999999999999999999999999999999999


Q ss_pred             ecccCCCCCeEEEEecCCCCCceeeeCCCC---ccccccCCCcchhhhhHHHHHHHHHHHc------CCCCCCCCceEEE
Q 048621           86 KHVSGETEKVLKIANVSDKYSLCTYPAEPD---QELDLKHHQWGHYFICGYKGFYEYVKAK------GLDVGPPVGLDIL  156 (456)
Q Consensus        86 ~~~~~~~~~~i~i~s~~~~~~~~~~~l~~~---~~~~~~~~~w~~~~~~~i~~v~~~l~~~------g~~~~~~~g~~i~  156 (456)
                      ++. .+ +..|++.|.+..+...+|+++..   ..+++....|.+|++++++++..++++.      |.   ...||++.
T Consensus        77 ~~~-~~-d~~i~i~S~~~~~~~~~~~l~~~~~~~~i~~~~~~W~~Yv~g~i~~v~~~l~~~~~~~~~g~---~~~G~~i~  151 (520)
T 3v2u_C           77 ILD-EK-NPSITLTNADPKFAQRKFDLPLDGSYMAIDPSVSEWSNYFKCGLHVAHSYLKKIAPERFNNT---PLVGAQIF  151 (520)
T ss_dssp             ECC-CS-SCEEEEEESSTTSCCEEEECCTTCCCCCCCTTSCCHHHHHHHHHHHHHHHHHHHCHHHHSSS---CCCCEEEE
T ss_pred             ecc-CC-CCEEEEEECCCCCCceEEEeccCccccccCcccccHHHHHHHHHHHHHHHHHhhcccccccC---CCCceEEE
Confidence            851 02 37899998775554456776322   2344445689999999998888888764      33   25899999


Q ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHhhhhCCCCCcchhhhhhhccCCcEEEeecCC-
Q 048621          157 VDGIVPTGSGLSSSAAFVCSSTIALMAAF---GVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNP-  232 (456)
Q Consensus       157 i~S~IP~g~GLGSSAA~~vA~~~al~~l~---g~~ls~~el~~la~~~E~~~~~~~g~~D~~~s~~Gg~~~~~~i~~~~-  232 (456)
                      |.|+||+|+||  |||++||++.|++.++   +.++++.+++++|+.+|+++|.+||+|||+++++|+.|+++++||++ 
T Consensus       152 i~s~vP~gsGL--SAA~~va~~~Al~~~~~g~~~~l~~~~la~la~~aE~~vG~~~G~mDQ~as~~G~~g~~l~id~~~~  229 (520)
T 3v2u_C          152 CQSDIPTGGGL--SSAFTCAAALATIRANMGKNFDISKKDLTRITAVAEHYVGVNNGGMDQATSVYGEEDHALYVEFRPK  229 (520)
T ss_dssp             EEECCCTTSSH--HHHHHHHHHHHHHHHHHCTTCCCBHHHHHHHHTTGGGGGTCCCCSHHHHHHHHCBTTBEEEEECSSS
T ss_pred             EecCCCCCCCH--HHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhCCCCchhhHHHHHhCCCCeEEEEEcCCC
Confidence            99999999999  9999999999999998   77899999999999999999999999999999999999999999999 


Q ss_pred             CceeeccCCC----CcEEEEEecCCccccccccccchhhHHHHHHHHHHHHhHHhCCCcc----hhhcccccccchhhhh
Q 048621          233 IRATDVQLPA----GGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQ----EAISKVKTLSDVEGLC  304 (456)
Q Consensus       233 ~~~~~~~~p~----~~~~ll~~s~~~~~~~~~~~~~yn~R~~e~~~a~~~l~~~~~~~~~----~~~~~~~~Lr~~~~~~  304 (456)
                      ++++++++|+    ++.|+|+||++.++|+.+++++||.|++||+.|+++|++++|++..    .......+||++.+.+
T Consensus       230 l~~~~v~~p~~~~~~~~~vI~ns~v~~~k~~la~s~YN~Rr~eCe~Aa~~L~~~~g~~~~~~~~~~~~~~~sLRdv~~~~  309 (520)
T 3v2u_C          230 LKATPFKFPQLKNHEISFVIANTLVKSNKFETAPTNYNLRVIEVTVAANALATRYSVALPSHKDNSNSERGNLRDFMDAY  309 (520)
T ss_dssp             CEEEEECCCCCSSCEEEEEEEECCCCCCHHHHTTTTHHHHHHHHHHHHHHHHHHTTBCCCCCCSCSSCTTCCHHHHHHHH
T ss_pred             ceeEEeeCCCccCCCeEEEEEECCCcccccccccchhhHHHHHHHHHHHHHHHhhCCcccccccccccccccHHHHhHhh
Confidence            9999999986    8999999999998999999999999999999999999999886411    1111224789886542


Q ss_pred             hh--------hcC-----CCCCCchhHHHHhhhccC--CCCHHHHHHHHhhhhhhhhhccCCchhhhhhhhhhHHHHHHH
Q 048621          305 VA--------FAG-----KNGSDDPFLAVKEFLHEE--PYMAKDIEKIIEEKLSSIFANSSSSLDVLNAAKHYKLHQRAA  369 (456)
Q Consensus       305 ~~--------~~g-----~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  369 (456)
                      ..        |.+     ..+.+++.+.+.+.+.+.  +|+.+++.+.++...+++.++++..+|+  +.++|.+++|++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~yt~~e~~~~l~~~~~~l~~~~l~~~~~--~~~~~~l~~RA~  387 (520)
T 3v2u_C          310 YARYENQAQPWNGDIGTGIERLLKMLQLVEESFSRKKSGFTVHEASTALNCSREEFTRDYLTTFPV--RFQVLKLYQRAK  387 (520)
T ss_dssp             HHHHCTTSCCCSSCHHHHHHHHHHHHHHHHHHHTTCTTCBCHHHHHHHTTSCHHHHHHHHTSSSCE--EESCBCHHHHHH
T ss_pred             hhhccccccccccchhhHHHHHHHHHHHHHHHhhhccccccHHHHHHhhcCChhhhhhhhcccccc--ccccHHHHHHHH
Confidence            11        110     011234555666667653  8999999999886656676677777775  556777999999


Q ss_pred             HHHHHHhhHHHHHHHHhcCC--CChHHHHHHHHHHHHhHHhhhhhcCCCcHHHHHHHHHHHhCCCceeeecccCCcceEE
Q 048621          370 HVYSEAKRVYAFKDTVYSNL--SDEDKLRRLGDLMNDSHHSCSVLYECSCPELEELVTVCRDNGALGARLTGAGWGGCAV  447 (456)
Q Consensus       370 ~~~~E~~rv~~~~~al~~~d--~~~~~~~~lG~Lm~~sh~~lr~l~~vS~peld~lv~~a~~~GalGaKltGaG~GG~~i  447 (456)
                      |+++|+.||++++++|++++  ++.++++.||+||+++|.+||++|+||||+||.|+++|++.|++||||||||||||+|
T Consensus       388 HVv~E~~Rv~~~~~al~~~~~~~~~~d~~~lg~lm~~sH~slr~~~~vS~peld~lv~~a~~~Ga~GarlTGaG~GGc~i  467 (520)
T 3v2u_C          388 HVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQASCDKLYECSCIETNQICSIALANGSFGSRLTGAGWGGCTI  467 (520)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHTTCSEEEECSSCSSSEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhCCCCEEEEecCCCCceEE
Confidence            99999999999999999863  1234699999999999999999999999999999999999999999999999999999


Q ss_pred             EEe---cCCCC
Q 048621          448 VLV---KESIV  455 (456)
Q Consensus       448 ~L~---~~~~~  455 (456)
                      +|+   +++.+
T Consensus       468 aLv~~~~~~~~  478 (520)
T 3v2u_C          468 HLVPSGANGNV  478 (520)
T ss_dssp             EEEEESTTCSH
T ss_pred             EEEcCCCHHHH
Confidence            999   65543
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Back     alignment and structure
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A Back     alignment and structure
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Back     alignment and structure
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei} Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Back     alignment and structure
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A* Back     alignment and structure
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* Back     alignment and structure
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A* Back     alignment and structure
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} Back     alignment and structure
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A* Back     alignment and structure
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A Back     alignment and structure
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5 Back     alignment and structure
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2 Back     alignment and structure
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} Back     alignment and structure
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} Back     alignment and structure
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 456
d1wuua1215 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapi 2e-44
d1piea1205 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lact 2e-39
d1s4ea1176 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococ 5e-36
d1kkha1180 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Met 2e-30
d1kvka1225 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus 3e-27
d1piea2183 d.58.26.7 (A:214-396) Galactokinase {Lactococcus l 3e-18
d1s4ea2171 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyro 3e-17
d1k47a1194 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) 7e-17
d1wuua2176 d.58.26.7 (A:217-392) Galactokinase {Human (Homo s 3e-16
d1kvka2169 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Ratt 8e-13
d1kkha2137 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon 8e-09
d1h72c1163 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Met 4e-05
d1k47a2135 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PM 4e-04
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 2e-44
 Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 10/219 (4%)

Query: 24  QLEEAQLRFGNLKSKFIQIFGHAPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVA 83
           +  +        +  F + FG  P++   +PGRVNLIGEH DY    VLPMA+   T++ 
Sbjct: 4   RQPQVAELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLV 63

Query: 84  IRKHVSGETEKVLKIANVSDKYSLCTYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAK 143
                 G    +       +   L        + L+    +W +Y     + +       
Sbjct: 64  GSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQYYPAA---- 119

Query: 144 GLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECE- 202
                P  G   +V   VP G GLSSSA+   ++   L             AQ+  + E 
Sbjct: 120 -----PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEH 174

Query: 203 RYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLP 241
            + G   G MDQ IS+M + G A LID   +  + V L 
Sbjct: 175 SFAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLS 213
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 205 Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 176 Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 180 Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 225 Back     information, alignment and structure
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 183 Back     information, alignment and structure
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 171 Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 194 Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 176 Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 169 Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 137 Back     information, alignment and structure
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 163 Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 135 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query456
d1piea1205 Galactokinase {Lactococcus lactis [TaxId: 1358]} 100.0
d1wuua1215 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1s4ea1176 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 100.0
d1piea2183 Galactokinase {Lactococcus lactis [TaxId: 1358]} 100.0
d1kkha1180 Mevalonate kinase {Archaeon Methanococcus jannasch 99.97
d1s4ea2171 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 99.97
d1wuua2176 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1kvka1225 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.96
d1k47a1194 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.95
d1h72c1163 Homoserine kinase {Archaeon Methanococcus jannasch 99.82
d1kvka2169 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.81
d1kkha2137 Mevalonate kinase {Archaeon Methanococcus jannasch 99.71
d1k47a2135 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.66
d1oj4a1163 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.16
d1ueka1148 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.06
d1fi4a1188 Mevalonate 5-diphosphate decarboxylase {Baker's ye 97.74
d1h72c2133 Homoserine kinase {Archaeon Methanococcus jannasch 96.73
d1ueka2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 92.64
d1oj4a2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 82.06
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=100.00  E-value=1.1e-39  Score=301.99  Aligned_cols=198  Identities=33%  Similarity=0.502  Sum_probs=169.1

Q ss_pred             HHHHHHHHHHHhCCCCCE-EEEecceecccccccccCCCeeeeeecccceEEEEEecccCCCCCeEEEEecCCC-CCcee
Q 048621           32 FGNLKSKFIQIFGHAPDV-YARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHVSGETEKVLKIANVSDK-YSLCT  109 (456)
Q Consensus        32 ~~~~~~~f~~~fg~~~~~-~~~APgri~L~GEh~d~~G~~~l~~AI~~~~~v~v~~~~~~~~~~~i~i~s~~~~-~~~~~  109 (456)
                      .+.+.+.|++.||..|++ .++|||||+|+|||+||+||+||++||++++++.++++   .| .++++.+.+.+ ....+
T Consensus         3 ~~~~~~~f~~~f~~~~~~~~~~aPgRv~L~GeH~Dy~gg~vl~~AI~~~~~v~~~~~---~d-~~i~i~s~~~~~~~~~~   78 (205)
T d1piea1           3 LSALTEKFAEVFGDTKEVEYFFSPGRINLIGEHTDYNGGYVFPASITIGTTGLARLR---ED-KKVKLYSENFPKLGVIE   78 (205)
T ss_dssp             HHHHHHHHHHHHSCCCSCEEEEEEEEEEEECCSCTTTTCEEEEEEEEEEEEEEEEEC---SS-SEEEEEETTCGGGCCEE
T ss_pred             HHHHHHHHHHHhCCCcceeEEEcceEEEEecCCeeECCCEeecccccceEEEEEecC---CC-CeeeeecCCCCccceee
Confidence            567899999999999984 88999999999999999999999999999999999999   65 88999886532 11122


Q ss_pred             eeCCCCccccccCCCcchhhhhHHHHHHHHHHHcCCCCCCCCceEEEEEecCCCCCCCCchHHHHHHHHHHHHHHhCCCC
Q 048621          110 YPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEV  189 (456)
Q Consensus       110 ~~l~~~~~~~~~~~~w~~~~~~~i~~v~~~l~~~g~~~~~~~g~~i~i~S~IP~g~GLGSSAA~~vA~~~al~~l~g~~l  189 (456)
                      ++.+..  .......|.+|+    ++++..+.+.+..  ...||++.|.|+||+|+|||||||++||++.|++.++++++
T Consensus        79 ~~~~~~--~~~~~~~~~~~~----~~~i~~l~~~~~~--~~~G~~i~i~s~iP~gsGLgSSAAl~va~~~al~~~~~~~~  150 (205)
T d1piea1          79 FDLDEV--EKKDGELWSNYV----KGMIVMLKGAGYE--IDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNV  150 (205)
T ss_dssp             EETTCT--TSCCTTCTHHHH----HHHHHHHHHTTCC--CCSCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCC
T ss_pred             cccccc--ccccccchhHHH----HHHHHHHHHhCCc--cccCeEEEEecCCccccccCccHHHHHHHHHHHHHHhCCCC
Confidence            333211  123456799998    4666677776653  35899999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhh-hhCCCCCcchhhhhhhccCCcEEEeecCCCceeeccCC
Q 048621          190 PKKEIAQLTCECER-YIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLP  241 (456)
Q Consensus       190 s~~el~~la~~~E~-~~~~~~g~~D~~~s~~Gg~~~~~~i~~~~~~~~~~~~p  241 (456)
                      ++.+++++|+++|+ ++|.+||.|||+++++||.|+++++||++.+++.+|+.
T Consensus       151 ~~~~ia~~a~~~E~~~~g~~~G~~Dq~as~~g~~~~~~~~d~~~~~~~~ip~~  203 (205)
T d1piea1         151 PRLELVQLGQKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVE  203 (205)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCCCSHHHHHHHHCBTTEEEEEETTTCCEEEEECC
T ss_pred             CHHHHHHHHHHHHHhhcCCCCcHHHHHHHHhcCCCeEEEEECCCCcEEecCcc
Confidence            99999999999997 78999999999999999999999999999988887653
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure