Citrus Sinensis ID: 048756

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccEEEEcccccEEEEccccHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccHHHcccccccccccccccEEEEEccccEEEccccccHHHHHHHHHHHcccccccccEEEEcccccccccccccccccHHcccccEEEEEcHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mggcfsssstsspsssspsspsstslkhSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQadqeeapswflcssdsllfddyipaldledeleadqiyfvlptsklqykLSASDMAALAVKASLALQNASTVIVHLnnsrrkinppaaaarnrispspapassfdfqfhhqkpvsranfgisrSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM
Flexible Loop (DISEMBL)
mggcfsssstsspsssspsspsstslkHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIvhlnnsrrkiNPPAAAARNRISPSPAPASSFDFQFHHQKPvsranfgisrsasvrkfqrytsrrtklavrsfrlrlatifegivm
Low Complexity Region (SEG)
MGGCFsssstsspsssspsspsstsLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKinppaaaarnrispspapassFDFQFHHQKPVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM
Disordered region (IsUnstruct)
*******************************KVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLN*************************************************VRKFQRYTSRRTKLAVRSFRLRLATIFEGI**
Disordered Region (DISOPRED)
MG**************************STAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQA*QEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV****************************************************************************************LATIFEGIVM
Disordered Region (DISEMBL)
*******************************KVLTLKGEVAEYKVPVIVSQVLAHQ**********PSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM
Disordered Region (DISPRO)
***************************HSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQN*********************************************************************TKLAVRSFRLRLATIFEGI**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
224083398	211	predicted protein [Populus trichocarpa]	0.894	0.924	0.474	3e-44
147811533	191	hypothetical protein VITISV_044257 [Viti	0.876	1.0	0.458	5e-42
225457701	191	PREDICTED: uncharacterized protein LOC10	0.876	1.0	0.449	1e-41
224065623	214	predicted protein [Populus trichocarpa]	0.917	0.934	0.463	6e-40
18411155	216	uncharacterized protein [Arabidopsis tha	0.899	0.907	0.454	2e-39
255539372	210	conserved hypothetical protein [Ricinus	0.926	0.961	0.460	5e-39
297845082	207	hypothetical protein ARALYDRAFT_889558 [	0.811	0.855	0.472	3e-37
449455746	217	PREDICTED: uncharacterized protein LOC10	0.811	0.815	0.471	5e-37
18394938	210	uncharacterized protein [Arabidopsis tha	0.811	0.842	0.461	2e-36
21553860	210	unknown [Arabidopsis thaliana]	0.811	0.842	0.470	4e-36

>gi|224083398|ref|XP_002307010.1| predicted protein [Populus trichocarpa] gi|222856459|gb|EEE94006.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/234 (47%), Positives = 141/234 (60%), Gaps = 39/234 (16%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MGGCFSSS              S  ++  TAKV+++ G++ EY +P  VSQVL  ++A+ 
Sbjct: 1   MGGCFSSSFLGE---------DSEQVRPQTAKVISIHGDLREYYLPAFVSQVLQAEIASS 51

Query: 61  ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV 120
           +    + SWFLC+SD LL+D+YIPALD +  L ADQIYFVLP SKLQ++L++SDMAALAV
Sbjct: 52  SSSSSSSSWFLCNSDLLLYDEYIPALDSDVPLHADQIYFVLPKSKLQHRLTSSDMAALAV 111

Query: 121 KASLALQNASTVIVHLNNSRRKINPPAAAARNRISP------------SPAPASSFDF-- 166
           KASLALQN+S               P    + RISP                  SFD   
Sbjct: 112 KASLALQNSSN------------KDPRRGKKARISPVLLVNPDHEHQGQNVVKVSFDRKP 159

Query: 167 --QFHHQKPVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM 218
             Q   ++P +   F  SRS SVRKFQ+YTSRR KLAVRSF+LRL TI+EG V+
Sbjct: 160 KPQVQQRQPANPIVF--SRSGSVRKFQKYTSRRAKLAVRSFKLRLTTIYEGTVL 211

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811533|emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/218 (45%), Positives = 135/218 (61%), Gaps = 27/218 (12%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MGGC SS  + S S+S+           +TAK+++L GE+ EY  PV VSQVL  +    
Sbjct: 1   MGGCVSSVGSYSNSTST-----------ATAKLISLHGELREYSAPVTVSQVLHFE---- 45

Query: 61  ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV 120
                + S F+C+SDSL +DDYIPA++ +DEL   QIYF+L   KLQY+LSAS+MAALAV
Sbjct: 46  ---SSSSSCFVCNSDSLYYDDYIPAMNADDELLPGQIYFLLSAXKLQYRLSASEMAALAV 102

Query: 121 KASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFG 180
           KAS+ALQN S    H  N++ +I+ P      ++  +        F    +KP      G
Sbjct: 103 KASIALQNHSKKAGHRRNNKSRIS-PVLEVNQKVMEAEVGGVKKSF----EKPA----LG 153

Query: 181 ISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM 218
           +SR  SVRK QR++SRR ++AVRSFRLRL TI+EG V+
Sbjct: 154 VSRHGSVRKLQRHSSRRARMAVRSFRLRLTTIYEGSVL 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457701|ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240987 [Vitis vinifera] gi|297745627|emb|CBI40792.3| unnamed protein product [Vitis vinifera]

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 27/218 (12%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MGGC SS  + S S+S+           +TAK+++L GE+ EY  PV VSQVL  +    
Sbjct: 1   MGGCVSSVGSYSNSTST-----------ATAKLISLHGELREYSAPVTVSQVLHFE---- 45

Query: 61  ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV 120
                + S F+C+SDSL +DDYIPA++ +DEL   QIYF+L  +KLQY+L+AS+MAALAV
Sbjct: 46  ---SSSSSCFVCNSDSLYYDDYIPAMNADDELLPGQIYFLLSATKLQYRLTASEMAALAV 102

Query: 121 KASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFG 180
           KAS+ALQN S    H  N++ +I+ P      ++  +        F    +KP      G
Sbjct: 103 KASIALQNHSKKAGHRRNNKSRIS-PVLEVNQKVMEAEVGGVKKSF----EKPA----LG 153

Query: 181 ISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM 218
           +SR  S+RK QR++SRR ++AVRSFRLRL TI+EG V+
Sbjct: 154 VSRHGSLRKLQRHSSRRARMAVRSFRLRLTTIYEGSVL 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065623|ref|XP_002301889.1| predicted protein [Populus trichocarpa] gi|222843615|gb|EEE81162.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 135/231 (58%), Gaps = 31/231 (13%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MG C SSS      S     P        TAKV+++ G++ EY +P  VSQVL  ++A+ 
Sbjct: 1   MGACVSSSYLGHHESHEQLRPK-------TAKVISIHGDLREYYLPAFVSQVLRSEIASS 53

Query: 61  ADQEEAPS-WFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALA 119
           +    + S WFLC+SD L +D+YIP L  +  L AD+IYFVLP SKLQ +L++SDMAALA
Sbjct: 54  SSSSSSSSSWFLCNSDHLSYDEYIPVLASDVPLHADEIYFVLPNSKLQRRLASSDMAALA 113

Query: 120 VKASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFH--------HQ 171
           VKASLALQN+S        SRR         + RISP    +   D Q H        H+
Sbjct: 114 VKASLALQNSSKK----GGSRR-------GKKARISPVLLVSPDHDHQQHNVIYQKRKHE 162

Query: 172 KPVSRA----NFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM 218
             V RA      G SRS S R F++YTSRR KLAVRSF+LRL TI+EGI +
Sbjct: 163 PQVQRAADSVAIGFSRSGSDRSFKKYTSRRAKLAVRSFKLRLTTIYEGIAL 213

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411155|ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana] gi|12323985|gb|AAG51956.1|AC015450_17 unknown protein; 83277-83927 [Arabidopsis thaliana] gi|21592540|gb|AAM64489.1| unknown [Arabidopsis thaliana] gi|23197634|gb|AAN15344.1| Unknown protein [Arabidopsis thaliana] gi|332197742|gb|AEE35863.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/231 (45%), Positives = 140/231 (60%), Gaps = 35/231 (15%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MG C S +     SSS+            TAK++T+ G++ EY VPV+ SQVL  +  + 
Sbjct: 1   MGLCVSVNRNEYVSSST------------TAKIVTINGDLREYDVPVLASQVLESESTSS 48

Query: 61  ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV 120
           +    + S+FLC+SDSL +DD+IPA++ ++ L+A+QIYFVLP SK QY+LSASDMAALAV
Sbjct: 49  SSSSSSSSYFLCNSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAV 108

Query: 121 KASLALQNASTVIVHLNNSRR--KINPPA----------AAARNRISPSPAPASSFDFQF 168
           KAS+A++ A+      N  RR  +I+P            AA  NRI      A++   Q 
Sbjct: 109 KASVAIEKAAG---KKNRRRRSGRISPVVTLNQANDNRIAAVNNRIG---GEATNMMMQK 162

Query: 169 ----HHQKPVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEG 215
               +   P    N G SRS SVRK +RYTS R KLAVRSFRLRL+TI+EG
Sbjct: 163 GKLPNRTTPFKDTN-GYSRSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEG 212

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539372|ref|XP_002510751.1| conserved hypothetical protein [Ricinus communis] gi|223551452|gb|EEF52938.1| conserved hypothetical protein [Ricinus communis]

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/226 (46%), Positives = 138/226 (61%), Gaps = 24/226 (10%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MG CFS S  S      P+           A V+++ G + +Y VPVI SQVL  + AA 
Sbjct: 1   MGSCFSCSVFSESDLLPPA-----------ANVVSINGTLRQYNVPVIASQVLDAE-AAS 48

Query: 61  ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV 120
           +    + S+FLC+SD L +DD IPALD + +L A+Q+YF+LP SKLQ +L+A DMAALAV
Sbjct: 49  SSSSSSTSFFLCNSDFLSYDDLIPALDSDAQLYANQLYFILPKSKLQNRLTAPDMAALAV 108

Query: 121 KASLALQNASTVIVHLNNSRRKINP-----PAAAARNRISPSPA---PASSFDFQFHHQK 172
           KAS+ALQNAS    H    + +I+P      +++ R+ ++P+     P  +F      Q 
Sbjct: 109 KASVALQNASKNEAH-RRKKARISPVLLVNQSSSQRHLLNPTSGDAYPRKTFQKAKGEQP 167

Query: 173 PVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM 218
           PV     G SRS SVR+  RYTSRR KLAVRSFRLRL TI+EG V+
Sbjct: 168 PVG---MGFSRSGSVRRLHRYTSRRAKLAVRSFRLRLTTIYEGTVL 210

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845082|ref|XP_002890422.1| hypothetical protein ARALYDRAFT_889558 [Arabidopsis lyrata subsp. lyrata] gi|297336264|gb|EFH66681.1| hypothetical protein ARALYDRAFT_889558 [Arabidopsis lyrata subsp. lyrata]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/203 (47%), Positives = 129/203 (63%), Gaps = 26/203 (12%)

Query: 30  TAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLE 89
           T K++T+ G++ EY VPVI SQVL  + AA +    + S+F+C SDSL +DD+IPA+  E
Sbjct: 17  TVKIVTVNGDLREYNVPVIASQVLEAESAAASSSSRSSSYFICDSDSLYYDDFIPAIKSE 76

Query: 90  DELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPPAAA 149
           + L+ADQIYFVLP SK Q +L+ASDMAALAVKAS+A+QN+    V   + RRK       
Sbjct: 77  EPLQADQIYFVLPISKRQNRLTASDMAALAVKASVAIQNS----VKKESRRRK------- 125

Query: 150 ARNRISPSPAPASSFD--------FQFHHQKPVS------RANFGISRSASVRKFQRYTS 195
            + RISP      S D              +P+       +A+ G +RS SVR  +RYTS
Sbjct: 126 -KVRISPVMMLTGSNDSLNGNGSETTVKKGRPLVSKTAPFKASSGYNRSGSVRNLRRYTS 184

Query: 196 RRTKLAVRSFRLRLATIFEGIVM 218
           +R KLAVRSFRL+L+TI+EG V+
Sbjct: 185 KRAKLAVRSFRLKLSTIYEGSVV 207

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455746|ref|XP_004145612.1| PREDICTED: uncharacterized protein LOC101220453 [Cucumis sativus] gi|449485238|ref|XP_004157109.1| PREDICTED: uncharacterized protein LOC101223391 [Cucumis sativus]

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 16/193 (8%)

Query: 30  TAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLE 89
           TAKV++L+G + EY VP+ VS+VL      +         FLC+SD L +DD+IP+L L+
Sbjct: 37  TAKVISLQGHLREYPVPISVSRVLQ----TENSSSSTSDSFLCNSDRLFYDDFIPSLPLD 92

Query: 90  DELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPPAAA 149
            +L  +QIYF+LP+S L ++L+A DMAALAVKA+LALQNAST  +HL        P    
Sbjct: 93  HQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNASTNNLHL--------PHNKG 144

Query: 150 ARNRISPSPAPASSFDFQFHHQKPVSRANFGISR----SASVRKFQRYTSRRTKLAVRSF 205
            R RISP     S  D Q  H+   + +    S+    S+SV+K QR TSRR K+AVRSF
Sbjct: 145 RRRRISPLFDLDSPNDQQNEHEHEHALSTNSNSKNNTTSSSVKKLQRLTSRRAKMAVRSF 204

Query: 206 RLRLATIFEGIVM 218
           +LRL+TI+EG V+
Sbjct: 205 KLRLSTIYEGTVL 217

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394938|ref|NP_564129.1| uncharacterized protein [Arabidopsis thaliana] gi|32815937|gb|AAP88353.1| At1g21010 [Arabidopsis thaliana] gi|110743853|dbj|BAE99761.1| hypothetical protein [Arabidopsis thaliana] gi|332191933|gb|AEE30054.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 127/206 (61%), Gaps = 29/206 (14%)

Query: 30  TAKVLTLKGEVAEYKVPVIVSQVL---AHQLAAQADQEEAPSWFLCSSDSLLFDDYIPAL 86
           T K++T+ G++ EY VPVI SQVL   +    + +      S+F+C SDSL +DD+IPA+
Sbjct: 17  TVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSYFICDSDSLYYDDFIPAI 76

Query: 87  DLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPP 146
             E+ L+ADQIYFVLP SK Q +L+ASDMAALAVKAS+A+QN+    V   + RRK    
Sbjct: 77  KSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNS----VKKESRRRK---- 128

Query: 147 AAAARNRISPSPAPASSFD--------------FQFHHQKPVSRANFGISRSASVRKFQR 192
               + RISP      S D                F  +    +A+ GI+RS SVR  +R
Sbjct: 129 ----KVRISPVMMLTGSNDSVNGNGSETTVKKGRPFVSKTAPVKASSGINRSGSVRNLRR 184

Query: 193 YTSRRTKLAVRSFRLRLATIFEGIVM 218
           YTS+R KLAVRSFRL+L+TI+EG V+
Sbjct: 185 YTSKRAKLAVRSFRLKLSTIYEGSVV 210

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553860|gb|AAM62953.1| unknown [Arabidopsis thaliana]

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 129/206 (62%), Gaps = 29/206 (14%)

Query: 30  TAKVLTLKGEVAEYKVPVIVSQVL---AHQLAAQADQEEAPSWFLCSSDSLLFDDYIPAL 86
           T K++T+ G++ EY VPVI SQVL   +    + +      S+F+C SDSL +DD+IPA+
Sbjct: 17  TVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSYFICDSDSLYYDDFIPAI 76

Query: 87  DLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKINPP 146
             E+ L+ADQIYFVLP SK Q +L+ASDMAALAVKAS+A+QN+    V   + RRK    
Sbjct: 77  KSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNS----VKKESRRRK---- 128

Query: 147 AAAARNRISPSPAPASSFD--------FQFHHQKP-VS-----RANFGISRSASVRKFQR 192
               + RISP      S D              +P VS     +A+ GI+RS SVR  +R
Sbjct: 129 ----KVRISPVMMLTGSNDSVNGNTSETTVKKGRPFVSKTAPFKASSGINRSGSVRNLRR 184

Query: 193 YTSRRTKLAVRSFRLRLATIFEGIVM 218
           YTS+R KLAVRSFRL+L+TI+EG V+
Sbjct: 185 YTSKRAKLAVRSFRLKLSTIYEGSVV 210

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
TAIR|locus:2011751	216	AT1G76600 "AT1G76600" [Arabido	0.467	0.472	0.549	2.5e-39
TAIR|locus:2037400	210	AT1G21010 "AT1G21010" [Arabido	0.848	0.880	0.474	1.7e-36
TAIR|locus:2154955	156	AT5G66580 "AT5G66580" [Arabido	0.444	0.621	0.401	1.6e-13
TAIR|locus:2115145	168	AT4G37240 "AT4G37240" [Arabido	0.403	0.523	0.418	2.4e-12
TAIR|locus:2077952	152	AT3G50800 "AT3G50800" [Arabido	0.399	0.572	0.402	1e-11

TAIR|locus:2011751 AT1G76600 "AT1G76600" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 56/102 (54%), Positives = 82/102 (80%)

Query:    29 STAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDL 88
             +TAK++T+ G++ EY VPV+ SQVL  +  + +    + S+FLC+SDSL +DD+IPA++ 
Sbjct:    17 TTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIPAIES 76

Query:    89 EDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNAS 130
             ++ L+A+QIYFVLP SK QY+LSASDMAALAVKAS+A++ A+
Sbjct:    77 DEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAA 118

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2037400 AT1G21010 "AT1G21010" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 94/198 (47%), Positives = 125/198 (63%)

Query:    30 TAKVLTLKGEVAEYKVPVIVSQVLAHQLAA--QADQEEAPS-WFLCSSDSLLFDDYIPAL 86
             T K++T+ G++ EY VPVI SQVL  + AA   +     PS +F+C SDSL +DD+IPA+
Sbjct:    17 TVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSYFICDSDSLYYDDFIPAI 76

Query:    87 DLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKXXXX 146
               E+ L+ADQIYFVLP SK Q +L+ASDMAALAVKAS+A+QN+    V   + RRK    
Sbjct:    77 KSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNS----VKKESRRRKKVRI 132

Query:   147 XXXXXXXXXXXXXXXXXFDFQFHHQKP-VSR-----ANFGISRSASVRKFQRYTSRRTKL 200
                               +      +P VS+     A+ GI+RS SVR  +RYTS+R KL
Sbjct:   133 SPVMMLTGSNDSVNGNGSETTVKKGRPFVSKTAPVKASSGINRSGSVRNLRRYTSKRAKL 192

Query:   201 AVRSFRLRLATIFEGIVM 218
             AVRSFRL+L+TI+EG V+
Sbjct:   193 AVRSFRLKLSTIYEGSVV 210

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2154955 AT5G66580 "AT5G66580" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 43/107 (40%), Positives = 65/107 (60%)

Query:    26 LKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPA 85
             L+  +AK++ L G + E+  PV V Q+L          ++ P+ F+C+SD + FDD + A
Sbjct:    10 LRSDSAKLILLDGTLQEFSSPVKVWQIL----------QKNPTSFVCNSDEMDFDDAVSA 59

Query:    86 LDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTV 132
             +   +EL + Q+YFVLP + L + L A +MAALAVKAS AL  +  V
Sbjct:    60 VAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGV 106

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2115145 AT4G37240 "AT4G37240" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 41/98 (41%), Positives = 57/98 (58%)

Query:    29 STAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDL 88
             +TAK++   G + E+  PV V  VL           + P  F+C+SD + FDD + A+  
Sbjct:    13 ATAKLILQDGRMMEFANPVKVGYVLL----------KYPMCFICNSDDMDFDDAVAAISA 62

Query:    89 EDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLAL 126
             ++EL+  QIYF LP   L+  L A +MAALAVKAS AL
Sbjct:    63 DEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSAL 100

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2077952 AT3G50800 "AT3G50800" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query:    30 TAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLE 89
             TAK++   G + E+  PV V Q+L          ++ P+ F+C+SD + FDD + A+   
Sbjct:    14 TAKLILPDGTLQEFSTPVKVWQIL----------QKNPTSFVCNSDDMDFDDAVLAVPGS 63

Query:    90 DELEADQIYFVLPTSKLQYKLSASDMAALAVKASLAL 126
             ++L   ++YFVLP + L + L A +MAALAVKAS AL
Sbjct:    64 EDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSAL 100


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.132   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       177   0.00084  109 3  11 22  0.50    31
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  135 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.02u 0.12s 15.14t   Elapsed:  00:00:01
  Total cpu time:  15.02u 0.12s 15.14t   Elapsed:  00:00:01
  Start:  Tue May 21 01:28:22 2013   End:  Tue May 21 01:28:23 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	218
pfam14009	181	pfam14009, DUF4228, Domain of unknown function (DU	2e-22

>gnl|CDD|222492 pfam14009, DUF4228, Domain of unknown function (DUF4228)

 Score = 89.7 bits (223), Expect = 2e-22
 Identities = 62/214 (28%), Positives = 89/214 (41%), Gaps = 33/214 (15%)

Query: 1   MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ 60
           MG C S     S +++             T KV+   G+V EY  PV  ++++       
Sbjct: 1   MGNCLSCCLAPSGAAA-------------TVKVVHPDGKVREYSRPVTAAELML------ 41

Query: 61  ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV 120
               E P  F+C SDSL     IPAL  +DELE  Q+YF+LP  +LQ  L+A DMA+LA 
Sbjct: 42  ----EYPGHFVCDSDSLYIGRRIPALPPDDELERGQLYFLLPAERLQSVLAAKDMASLAS 97

Query: 121 KASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFG 180
            AS AL++AS      +             R ++  S             ++ +   +  
Sbjct: 98  SASSALKSASAKRSSSSRPSPVRKSDGGVVRVKVVVSKE---------ELEELLEEGSVS 148

Query: 181 ISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFE 214
            S S           R      RS+R +L TI E
Sbjct: 149 ASLSELCET-PELRKRSRGSRSRSWRPKLETISE 181

This domain is found in plants. The function is not known. Length = 181

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	218
PF14009	181	DUF4228: Domain of unknown function (DUF4228)	100.0

>PF14009 DUF4228: Domain of unknown function (DUF4228)

Probab=100.00  E-value=8.2e-38  Score=251.83  Aligned_cols=107  Identities=45%  Similarity=0.671  Sum_probs=99.3

Q ss_pred             CCCccCCCCCCCCCCCCCCCCCCcCCCCCceEEEccCCcEEEecCCccHHHHHHHHHhhhcCcCCCCCeEEEccCCCCCC
Q 048756            1 MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFD   80 (218)
Q Consensus         1 MGnCvS~~~~~~~~~~~~~~~~~~~~~~~taKVV~~DG~v~ef~~PvtAseVL~~~~~~~~~~~~~P~~FVC~SD~L~~~   80 (218)
                      ||||+||...             ......++|||++||+|+||+.||+|+|||.+|          |+||||+++.+.++
T Consensus         1 MGn~~~~~~~-------------~~~~~~~vkvv~~~G~v~~~~~pv~a~evm~~~----------P~h~v~~~~~~~~~   57 (181)
T PF14009_consen    1 MGNCVSCCLA-------------SSSSAATVKVVHPDGKVEEFKRPVTAAEVMLEN----------PGHFVCDSDSFRFG   57 (181)
T ss_pred             CCCccccccc-------------ccCCCceEEEEcCCCcEEEeCCCcCHHHHHHHC----------CCCEEeccccccCC
Confidence            9999999753             123568999999999999999999999999999          99999999999999


Q ss_pred             CCCCCCCCccccccCCeEEEecCCccCCCCCHHHHHHHHHHHHHHHHhcc
Q 048756           81 DYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNAS  130 (218)
Q Consensus        81 ~~i~aL~~DeeLqpGqiYFlLP~s~l~~~LSa~dmAaLAvkAssAL~~~~  130 (218)
                      .++++|++||+|++||||||||+++++..+++.+|++++.+++.+.....
T Consensus        58 ~~~~~l~~d~~L~~G~~Y~llP~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (181)
T PF14009_consen   58 RRIKPLPPDEELQPGQIYFLLPMSRLQSVLSASDMASLASSASSASSSSS  107 (181)
T ss_pred             CcccCCCccCeecCCCEEEEEEccccCcccccchhcccccchhhcccccc
Confidence            99999999999999999999999999999999999999999988887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	218
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	5e-05

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 41.1 bits (95), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 9/35 (25%)

Query: 93  EADQIYFVLPTSKLQ--YKLSASDMA-ALAVKASL 124
           E   +       KLQ   KL A D A ALA+KA++
Sbjct: 18  EKQAL------KKLQASLKLYADDSAPALAIKATM 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	218
d1tkea1	62	Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi	83.83

>d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: TGS-like
family: TGS domain
domain: Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain
species: Escherichia coli [TaxId: 562]

Probab=83.83  E-value=0.46  Score=31.09  Aligned_cols=26  Identities=15%  Similarity=0.102  Sum_probs=23.4

Q ss_pred             eEEEccCCcEEEecCCccHHHHHHHH
Q 048756           31 AKVLTLKGEVAEYKVPVIVSQVLAHQ   56 (218)
Q Consensus        31 aKVV~~DG~v~ef~~PvtAseVL~~~   56 (218)
                      ++|.++||++++|...+|+.|+....
T Consensus         2 ~~ItlPDG~~~~~~~g~T~~diA~~I   27 (62)
T d1tkea1           2 PVITLPDGSQRHYDHAVSPMDVALDI   27 (62)
T ss_dssp             CEEECTTSCEEECSSCBCHHHHHHHH
T ss_pred             CEEECCCCCEEEcCCCCCHHHHHHHH
Confidence            46788999999999999999998876