List of proteins associated with COG cluster: COG0328   RnhA Ribonuclease HI [DNA replication, recombination, and repair]
Protein ID
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analysis report

Similarity with COG COG0328
All predicted COG clusters
1g038308m 80 hhsearch probability: 95.03    Identity: 20%
subject length: 154   Length of aligned reigon: 44
Coverage over query: 11-55   Coverage over subject: 36-80
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g009997m 520 hhsearch probability: 99.76    Identity: 22%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 58-194   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
COG5220, TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
1g010003m 520 hhsearch probability: 99.76    Identity: 22%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 58-194   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
COG5220, TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
1g010007m 520 hhsearch probability: 99.76    Identity: 22%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 58-194   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
COG5220, TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
1g008441m 565 hhsearch probability: 99.86    Identity: 22%
subject length: 154   Length of aligned reigon: 129
Coverage over query: 155-294   Coverage over subject: 2-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG5540, RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5574, PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
COG5432, RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
COG5243, HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
1g039495m 327 hhsearch probability: 99.79    Identity: 22%
subject length: 154   Length of aligned reigon: 127
Coverage over query: 167-296   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g037050m 144 hhsearch probability: 99.83    Identity: 15%
subject length: 154   Length of aligned reigon: 118
Coverage over query: 2-122   Coverage over subject: 13-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG0590, CumB Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]
1g038317m 127 hhsearch probability: 99.94    Identity: 18%
subject length: 154   Length of aligned reigon: 122
Coverage over query: 1-126   Coverage over subject: 6-144
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG0295, Cdd Cytidine deaminase [Nucleotide transport and metabolism]
COG0590, CumB Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]
1g035454m 52 hhsearch probability: 98.23    Identity: 24%
subject length: 154   Length of aligned reigon: 41
Coverage over query: 2-42   Coverage over subject: 102-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g044837m 125 hhsearch probability: 99.88    Identity: 16%
subject length: 154   Length of aligned reigon: 116
Coverage over query: 1-119   Coverage over subject: 15-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG0590, CumB Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]
COG0295, Cdd Cytidine deaminase [Nucleotide transport and metabolism]
1g039849m 202 hhsearch probability: 99.69    Identity: 19%
subject length: 154   Length of aligned reigon: 109
Coverage over query: 90-202   Coverage over subject: 3-124
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g046558m 136 hhsearch probability: 99.83    Identity: 22%
subject length: 154   Length of aligned reigon: 110
Coverage over query: 22-135   Coverage over subject: 3-125
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG0295, Cdd Cytidine deaminase [Nucleotide transport and metabolism]
1g041278m 101 hhsearch probability: 96.97    Identity: 21%
subject length: 154   Length of aligned reigon: 42
Coverage over query: 45-86   Coverage over subject: 39-80
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g042421m 154 hhsearch probability: 99.93    Identity: 16%
subject length: 154   Length of aligned reigon: 125
Coverage over query: 25-153   Coverage over subject: 3-144
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g034727m 86 hhsearch probability: 99.64    Identity: 30%
subject length: 154   Length of aligned reigon: 83
Coverage over query: 2-85   Coverage over subject: 25-117
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g042834m 98 hhsearch probability: 99.72    Identity: 18%
subject length: 154   Length of aligned reigon: 79
Coverage over query: 6-87   Coverage over subject: 2-80
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG0295, Cdd Cytidine deaminase [Nucleotide transport and metabolism]
COG0590, CumB Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]
1g021019m 318 hhsearch probability: 99.93    Identity: 36%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 175-305   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG3341, Predicted double-stranded RNA/RNA-DNA hybrid binding protein [General function prediction only]
1g024506m 266 hhsearch probability: 99.79    Identity: 39%
subject length: 154   Length of aligned reigon: 84
Coverage over query: 175-261   Coverage over subject: 3-86
COG3341, Predicted double-stranded RNA/RNA-DNA hybrid binding protein [General function prediction only]
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g027994m 215 hhsearch probability: 99.95    Identity: 35%
subject length: 154   Length of aligned reigon: 129
Coverage over query: 72-202   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
1g021120m 317 hhsearch probability: 99.93    Identity: 36%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 175-304   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG3341, Predicted double-stranded RNA/RNA-DNA hybrid binding protein [General function prediction only]
1g021055m 318 hhsearch probability: 99.93    Identity: 36%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 175-305   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG3341, Predicted double-stranded RNA/RNA-DNA hybrid binding protein [General function prediction only]
1g021004m 318 hhsearch probability: 99.93    Identity: 36%
subject length: 154   Length of aligned reigon: 128
Coverage over query: 175-305   Coverage over subject: 3-146
COG0328, RnhA Ribonuclease HI [DNA replication, recombination, and repair]
COG3341, Predicted double-stranded RNA/RNA-DNA hybrid binding protein [General function prediction only]