| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0564 |
All predicted COG clusters |
|---|---|---|---|
| 1g007467m | 602 | hhsearch probability: 96.58 Identity: 25% subject length: 289 Length of aligned reigon: 75 Coverage over query: 101-176 Coverage over subject: 84-172 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2016, Predicted RNA-binding protein (contains PUA domain) [Translation, ribosomal structure and biogenesis] COG1258, Predicted pseudouridylate synthase [Translation, ribosomal structure and biogenesis] COG1370, Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit [Posttranslational modification, protein turnover, chaperones] COG5270, PUA domain (predicted RNA-binding domain) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1549, Queuine tRNA-ribosyltransferases, contain PUA domain [Translation, ribosomal structure and biogenesis] |
| 1g009707m | 528 | hhsearch probability: 96.99 Identity: 28% subject length: 289 Length of aligned reigon: 79 Coverage over query: 302-383 Coverage over subject: 80-172 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1258, Predicted pseudouridylate synthase [Translation, ribosomal structure and biogenesis] |
| 1g011455m | 485 | hhsearch probability: 97.08 Identity: 28% subject length: 289 Length of aligned reigon: 81 Coverage over query: 300-383 Coverage over subject: 78-172 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g013857m | 435 | hhsearch probability: 97.34 Identity: 29% subject length: 289 Length of aligned reigon: 75 Coverage over query: 308-383 Coverage over subject: 84-172 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g030157m | 182 | hhsearch probability: 96.31 Identity: 21% subject length: 289 Length of aligned reigon: 52 Coverage over query: 105-160 Coverage over subject: 11-62 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g025838m | 247 | hhsearch probability: 90.92 Identity: 23% subject length: 289 Length of aligned reigon: 57 Coverage over query: 22-81 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g024793m | 262 | hhsearch probability: 95.33 Identity: 25% subject length: 289 Length of aligned reigon: 57 Coverage over query: 40-99 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g025354m | 254 | hhsearch probability: 91.26 Identity: 25% subject length: 289 Length of aligned reigon: 57 Coverage over query: 32-91 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g024598m | 265 | hhsearch probability: 95.13 Identity: 23% subject length: 289 Length of aligned reigon: 57 Coverage over query: 40-99 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g023289m | 284 | hhsearch probability: 91.61 Identity: 25% subject length: 289 Length of aligned reigon: 57 Coverage over query: 62-121 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g046291m | 197 | hhsearch probability: 97.10 Identity: 20% subject length: 289 Length of aligned reigon: 54 Coverage over query: 106-161 Coverage over subject: 10-63 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g026062m | 244 | hhsearch probability: 91.77 Identity: 25% subject length: 289 Length of aligned reigon: 57 Coverage over query: 22-81 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g024108m | 272 | hhsearch probability: 91.74 Identity: 23% subject length: 289 Length of aligned reigon: 57 Coverage over query: 40-99 Coverage over subject: 11-67 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g020744m | 322 | hhsearch probability: 97.83 Identity: 34% subject length: 289 Length of aligned reigon: 56 Coverage over query: 243-299 Coverage over subject: 9-64 |
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g020729m | 322 | hhsearch probability: 97.83 Identity: 34% subject length: 289 Length of aligned reigon: 56 Coverage over query: 243-299 Coverage over subject: 9-64 |
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g026574m | 236 | hhsearch probability: 97.94 Identity: 35% subject length: 289 Length of aligned reigon: 55 Coverage over query: 157-212 Coverage over subject: 9-63 |
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g031089m | 166 | hhsearch probability: 99.97 Identity: 24% subject length: 289 Length of aligned reigon: 116 Coverage over query: 20-136 Coverage over subject: 121-250 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g031054m | 166 | hhsearch probability: 99.97 Identity: 24% subject length: 289 Length of aligned reigon: 116 Coverage over query: 20-136 Coverage over subject: 121-250 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g042443m | 95 | hhsearch probability: 95.74 Identity: 31% subject length: 289 Length of aligned reigon: 26 Coverage over query: 69-95 Coverage over subject: 11-36 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g026613m | 236 | hhsearch probability: 100.00 Identity: 32% subject length: 289 Length of aligned reigon: 163 Coverage over query: 6-225 Coverage over subject: 122-289 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g023907m | 275 | hhsearch probability: 100.00 Identity: 35% subject length: 289 Length of aligned reigon: 191 Coverage over query: 1-264 Coverage over subject: 96-289 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g015839m | 399 | hhsearch probability: 100.00 Identity: 30% subject length: 289 Length of aligned reigon: 263 Coverage over query: 74-343 Coverage over subject: 7-278 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g026355m | 240 | hhsearch probability: 100.00 Identity: 49% subject length: 289 Length of aligned reigon: 146 Coverage over query: 61-237 Coverage over subject: 3-149 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g022339m | 298 | hhsearch probability: 100.00 Identity: 47% subject length: 289 Length of aligned reigon: 195 Coverage over query: 61-286 Coverage over subject: 3-198 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g018524m | 354 | hhsearch probability: 100.00 Identity: 29% subject length: 289 Length of aligned reigon: 283 Coverage over query: 10-343 Coverage over subject: 3-289 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g023659m | 279 | hhsearch probability: 99.95 Identity: 19% subject length: 289 Length of aligned reigon: 123 Coverage over query: 110-277 Coverage over subject: 13-138 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g011530m | 483 | hhsearch probability: 100.00 Identity: 24% subject length: 289 Length of aligned reigon: 261 Coverage over query: 108-429 Coverage over subject: 11-287 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] |
| 1g018575m | 354 | hhsearch probability: 100.00 Identity: 29% subject length: 289 Length of aligned reigon: 283 Coverage over query: 10-343 Coverage over subject: 3-289 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g019431m | 341 | hhsearch probability: 100.00 Identity: 44% subject length: 289 Length of aligned reigon: 244 Coverage over query: 61-341 Coverage over subject: 3-248 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g020570m | 324 | hhsearch probability: 100.00 Identity: 46% subject length: 289 Length of aligned reigon: 228 Coverage over query: 61-324 Coverage over subject: 3-231 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g015203m | 411 | hhsearch probability: 100.00 Identity: 30% subject length: 289 Length of aligned reigon: 264 Coverage over query: 73-343 Coverage over subject: 6-278 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g037167m | 353 | hhsearch probability: 100.00 Identity: 38% subject length: 289 Length of aligned reigon: 272 Coverage over query: 1-324 Coverage over subject: 13-289 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g023331m | 284 | hhsearch probability: 99.96 Identity: 17% subject length: 289 Length of aligned reigon: 129 Coverage over query: 110-283 Coverage over subject: 13-144 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g018538m | 354 | hhsearch probability: 100.00 Identity: 23% subject length: 289 Length of aligned reigon: 168 Coverage over query: 111-323 Coverage over subject: 14-186 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g022299m | 299 | hhsearch probability: 100.00 Identity: 47% subject length: 289 Length of aligned reigon: 194 Coverage over query: 61-285 Coverage over subject: 3-197 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g023330m | 284 | hhsearch probability: 99.96 Identity: 17% subject length: 289 Length of aligned reigon: 129 Coverage over query: 110-283 Coverage over subject: 13-144 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g041166m | 133 | hhsearch probability: 99.96 Identity: 31% subject length: 289 Length of aligned reigon: 105 Coverage over query: 19-130 Coverage over subject: 53-161 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g042463m | 490 | hhsearch probability: 100.00 Identity: 30% subject length: 289 Length of aligned reigon: 278 Coverage over query: 103-476 Coverage over subject: 10-289 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] |
| 1g026204m | 241 | hhsearch probability: 100.00 Identity: 47% subject length: 289 Length of aligned reigon: 193 Coverage over query: 15-241 Coverage over subject: 38-231 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] |
| 1g023300m | 284 | hhsearch probability: 99.96 Identity: 17% subject length: 289 Length of aligned reigon: 129 Coverage over query: 110-283 Coverage over subject: 13-144 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g018562m | 354 | hhsearch probability: 100.00 Identity: 29% subject length: 289 Length of aligned reigon: 283 Coverage over query: 10-343 Coverage over subject: 3-289 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g023319m | 284 | hhsearch probability: 99.96 Identity: 17% subject length: 289 Length of aligned reigon: 129 Coverage over query: 110-283 Coverage over subject: 13-144 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |