| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0568 |
All predicted COG clusters |
|---|---|---|---|
| 1g010521m | 508 | hhsearch probability: 91.32 Identity: 31% subject length: 342 Length of aligned reigon: 32 Coverage over query: 191-222 Coverage over subject: 67-98 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g010527m | 508 | hhsearch probability: 91.32 Identity: 31% subject length: 342 Length of aligned reigon: 32 Coverage over query: 191-222 Coverage over subject: 67-98 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g011577m | 482 | hhsearch probability: 93.76 Identity: 24% subject length: 342 Length of aligned reigon: 33 Coverage over query: 253-285 Coverage over subject: 65-97 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g014764m | 419 | hhsearch probability: 96.78 Identity: 21% subject length: 342 Length of aligned reigon: 144 Coverage over query: 210-395 Coverage over subject: 183-328 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g013447m | 443 | hhsearch probability: 95.57 Identity: 30% subject length: 342 Length of aligned reigon: 33 Coverage over query: 191-223 Coverage over subject: 67-99 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g014852m | 417 | hhsearch probability: 97.14 Identity: 19% subject length: 342 Length of aligned reigon: 48 Coverage over query: 346-394 Coverage over subject: 280-327 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g011992m | 473 | hhsearch probability: 98.56 Identity: 21% subject length: 342 Length of aligned reigon: 82 Coverage over query: 224-324 Coverage over subject: 146-227 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g016321m | 391 | hhsearch probability: 92.21 Identity: 31% subject length: 342 Length of aligned reigon: 32 Coverage over query: 191-222 Coverage over subject: 67-98 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g020126m | 330 | hhsearch probability: 93.24 Identity: 31% subject length: 342 Length of aligned reigon: 32 Coverage over query: 191-222 Coverage over subject: 67-98 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g022167m | 301 | hhsearch probability: 93.63 Identity: 31% subject length: 342 Length of aligned reigon: 32 Coverage over query: 191-222 Coverage over subject: 67-98 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g011454m | 485 | hhsearch probability: 100.00 Identity: 38% subject length: 342 Length of aligned reigon: 291 Coverage over query: 190-482 Coverage over subject: 8-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g012691m | 458 | hhsearch probability: 100.00 Identity: 42% subject length: 342 Length of aligned reigon: 164 Coverage over query: 291-455 Coverage over subject: 8-192 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g014193m | 429 | hhsearch probability: 100.00 Identity: 39% subject length: 342 Length of aligned reigon: 171 Coverage over query: 254-424 Coverage over subject: 8-198 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g014241m | 428 | hhsearch probability: 100.00 Identity: 38% subject length: 342 Length of aligned reigon: 172 Coverage over query: 253-424 Coverage over subject: 7-199 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g019251m | 344 | hhsearch probability: 99.73 Identity: 23% subject length: 342 Length of aligned reigon: 116 Coverage over query: 218-336 Coverage over subject: 8-143 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g012710m | 458 | hhsearch probability: 100.00 Identity: 42% subject length: 342 Length of aligned reigon: 164 Coverage over query: 291-455 Coverage over subject: 8-192 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g016077m | 395 | hhsearch probability: 99.42 Identity: 34% subject length: 342 Length of aligned reigon: 104 Coverage over query: 291-395 Coverage over subject: 8-132 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g016759m | 383 | hhsearch probability: 99.97 Identity: 32% subject length: 342 Length of aligned reigon: 161 Coverage over query: 222-382 Coverage over subject: 8-189 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g017616m | 368 | hhsearch probability: 99.96 Identity: 32% subject length: 342 Length of aligned reigon: 146 Coverage over query: 222-367 Coverage over subject: 8-174 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g008352m | 569 | hhsearch probability: 100.00 Identity: 36% subject length: 342 Length of aligned reigon: 314 Coverage over query: 253-566 Coverage over subject: 7-342 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g008556m | 561 | hhsearch probability: 100.00 Identity: 36% subject length: 342 Length of aligned reigon: 314 Coverage over query: 245-558 Coverage over subject: 7-342 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g018065m | 361 | hhsearch probability: 99.51 Identity: 35% subject length: 342 Length of aligned reigon: 108 Coverage over query: 253-360 Coverage over subject: 7-134 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g020252m | 328 | hhsearch probability: 99.80 Identity: 32% subject length: 342 Length of aligned reigon: 117 Coverage over query: 211-328 Coverage over subject: 8-145 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g012567m | 460 | hhsearch probability: 100.00 Identity: 38% subject length: 342 Length of aligned reigon: 234 Coverage over query: 210-444 Coverage over subject: 7-261 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g019233m | 344 | hhsearch probability: 99.73 Identity: 23% subject length: 342 Length of aligned reigon: 116 Coverage over query: 218-336 Coverage over subject: 8-143 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g017761m | 366 | hhsearch probability: 99.98 Identity: 31% subject length: 342 Length of aligned reigon: 153 Coverage over query: 210-365 Coverage over subject: 7-185 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g017044m | 378 | hhsearch probability: 99.88 Identity: 33% subject length: 342 Length of aligned reigon: 126 Coverage over query: 253-378 Coverage over subject: 7-159 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g010284m | 513 | hhsearch probability: 100.00 Identity: 35% subject length: 342 Length of aligned reigon: 313 Coverage over query: 197-512 Coverage over subject: 5-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010338m | 513 | hhsearch probability: 100.00 Identity: 35% subject length: 342 Length of aligned reigon: 313 Coverage over query: 197-512 Coverage over subject: 5-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010835m | 499 | hhsearch probability: 100.00 Identity: 40% subject length: 342 Length of aligned reigon: 270 Coverage over query: 191-496 Coverage over subject: 67-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g011324m | 488 | hhsearch probability: 100.00 Identity: 35% subject length: 342 Length of aligned reigon: 234 Coverage over query: 254-487 Coverage over subject: 8-262 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g016880m | 381 | hhsearch probability: 99.97 Identity: 33% subject length: 342 Length of aligned reigon: 160 Coverage over query: 222-381 Coverage over subject: 8-188 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g012638m | 459 | hhsearch probability: 100.00 Identity: 29% subject length: 342 Length of aligned reigon: 224 Coverage over query: 230-453 Coverage over subject: 17-261 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g009567m | 532 | hhsearch probability: 100.00 Identity: 36% subject length: 342 Length of aligned reigon: 313 Coverage over query: 217-529 Coverage over subject: 8-342 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g010327m | 513 | hhsearch probability: 100.00 Identity: 35% subject length: 342 Length of aligned reigon: 313 Coverage over query: 197-512 Coverage over subject: 5-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g008652m | 558 | hhsearch probability: 100.00 Identity: 36% subject length: 342 Length of aligned reigon: 313 Coverage over query: 243-555 Coverage over subject: 8-342 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g010308m | 513 | hhsearch probability: 100.00 Identity: 35% subject length: 342 Length of aligned reigon: 313 Coverage over query: 197-512 Coverage over subject: 5-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g007404m | 605 | hhsearch probability: 100.00 Identity: 42% subject length: 342 Length of aligned reigon: 312 Coverage over query: 291-603 Coverage over subject: 8-342 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG3413, Predicted DNA binding protein [General function prediction only] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] |
| 1g016894m | 381 | hhsearch probability: 99.97 Identity: 33% subject length: 342 Length of aligned reigon: 160 Coverage over query: 222-381 Coverage over subject: 8-188 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] |
| 1g009803m | 525 | hhsearch probability: 100.00 Identity: 42% subject length: 342 Length of aligned reigon: 312 Coverage over query: 211-523 Coverage over subject: 8-342 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] |
| 1g013472m | 442 | hhsearch probability: 100.00 Identity: 30% subject length: 342 Length of aligned reigon: 220 Coverage over query: 221-440 Coverage over subject: 7-247 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g010092m | 518 | hhsearch probability: 100.00 Identity: 35% subject length: 342 Length of aligned reigon: 314 Coverage over query: 197-518 Coverage over subject: 5-342 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |
| 1g009449m | 534 | hhsearch probability: 100.00 Identity: 33% subject length: 342 Length of aligned reigon: 312 Coverage over query: 222-533 Coverage over subject: 8-342 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g046578m | 379 | hhsearch probability: 100.00 Identity: 39% subject length: 342 Length of aligned reigon: 250 Coverage over query: 129-378 Coverage over subject: 88-341 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |