| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1187 |
All predicted COG clusters |
|---|---|---|---|
| 1g037749m | 495 | hhsearch probability: 94.33 Identity: 24% subject length: 248 Length of aligned reigon: 45 Coverage over query: 428-473 Coverage over subject: 3-47 |
COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG0180, TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1384, LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0060, IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0215, CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0495, LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g007467m | 602 | hhsearch probability: 96.68 Identity: 23% subject length: 248 Length of aligned reigon: 145 Coverage over query: 104-271 Coverage over subject: 65-222 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2016, Predicted RNA-binding protein (contains PUA domain) [Translation, ribosomal structure and biogenesis] COG1258, Predicted pseudouridylate synthase [Translation, ribosomal structure and biogenesis] COG1370, Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit [Posttranslational modification, protein turnover, chaperones] COG5270, PUA domain (predicted RNA-binding domain) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1549, Queuine tRNA-ribosyltransferases, contain PUA domain [Translation, ribosomal structure and biogenesis] |
| 1g013857m | 435 | hhsearch probability: 94.82 Identity: 27% subject length: 248 Length of aligned reigon: 67 Coverage over query: 311-378 Coverage over subject: 65-143 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g009707m | 528 | hhsearch probability: 97.29 Identity: 27% subject length: 248 Length of aligned reigon: 150 Coverage over query: 311-522 Coverage over subject: 65-241 |
COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1258, Predicted pseudouridylate synthase [Translation, ribosomal structure and biogenesis] |
| 1g024598m | 265 | hhsearch probability: 91.98 Identity: 25% subject length: 248 Length of aligned reigon: 55 Coverage over query: 52-107 Coverage over subject: 12-73 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g024793m | 262 | hhsearch probability: 91.97 Identity: 26% subject length: 248 Length of aligned reigon: 57 Coverage over query: 52-109 Coverage over subject: 12-75 |
COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g026613m | 236 | hhsearch probability: 99.65 Identity: 11% subject length: 248 Length of aligned reigon: 112 Coverage over query: 7-137 Coverage over subject: 100-214 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g023907m | 275 | hhsearch probability: 99.68 Identity: 19% subject length: 248 Length of aligned reigon: 114 Coverage over query: 25-173 Coverage over subject: 97-211 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] |
| 1g041166m | 133 | hhsearch probability: 99.20 Identity: 20% subject length: 248 Length of aligned reigon: 111 Coverage over query: 2-120 Coverage over subject: 4-128 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g026204m | 241 | hhsearch probability: 99.84 Identity: 20% subject length: 248 Length of aligned reigon: 164 Coverage over query: 15-241 Coverage over subject: 28-195 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] |
| 1g046291m | 197 | hhsearch probability: 98.22 Identity: 24% subject length: 248 Length of aligned reigon: 46 Coverage over query: 108-154 Coverage over subject: 2-47 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] |
| 1g020744m | 322 | hhsearch probability: 97.95 Identity: 32% subject length: 248 Length of aligned reigon: 53 Coverage over query: 246-298 Coverage over subject: 2-55 |
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g023331m | 284 | hhsearch probability: 99.02 Identity: 18% subject length: 248 Length of aligned reigon: 115 Coverage over query: 110-281 Coverage over subject: 3-119 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g023330m | 284 | hhsearch probability: 99.02 Identity: 18% subject length: 248 Length of aligned reigon: 115 Coverage over query: 110-281 Coverage over subject: 3-119 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g020729m | 322 | hhsearch probability: 97.95 Identity: 32% subject length: 248 Length of aligned reigon: 53 Coverage over query: 246-298 Coverage over subject: 2-55 |
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g030157m | 182 | hhsearch probability: 98.08 Identity: 26% subject length: 248 Length of aligned reigon: 57 Coverage over query: 106-165 Coverage over subject: 2-58 |
COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0162, TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g023300m | 284 | hhsearch probability: 99.02 Identity: 18% subject length: 248 Length of aligned reigon: 115 Coverage over query: 110-281 Coverage over subject: 3-119 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g026574m | 236 | hhsearch probability: 98.05 Identity: 32% subject length: 248 Length of aligned reigon: 53 Coverage over query: 160-212 Coverage over subject: 2-55 |
COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g023319m | 284 | hhsearch probability: 99.02 Identity: 18% subject length: 248 Length of aligned reigon: 115 Coverage over query: 110-281 Coverage over subject: 3-119 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g020570m | 324 | hhsearch probability: 99.95 Identity: 22% subject length: 248 Length of aligned reigon: 192 Coverage over query: 70-324 Coverage over subject: 2-195 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g023659m | 279 | hhsearch probability: 98.98 Identity: 19% subject length: 248 Length of aligned reigon: 111 Coverage over query: 110-277 Coverage over subject: 3-115 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g011530m | 483 | hhsearch probability: 99.97 Identity: 19% subject length: 248 Length of aligned reigon: 208 Coverage over query: 110-402 Coverage over subject: 3-213 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] |
| 1g037167m | 353 | hhsearch probability: 100.00 Identity: 22% subject length: 248 Length of aligned reigon: 209 Coverage over query: 1-261 Coverage over subject: 3-213 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g042463m | 490 | hhsearch probability: 99.97 Identity: 17% subject length: 248 Length of aligned reigon: 206 Coverage over query: 105-394 Coverage over subject: 2-211 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] |
| 1g019431m | 341 | hhsearch probability: 100.00 Identity: 21% subject length: 248 Length of aligned reigon: 206 Coverage over query: 70-337 Coverage over subject: 2-208 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g015839m | 399 | hhsearch probability: 100.00 Identity: 20% subject length: 248 Length of aligned reigon: 205 Coverage over query: 79-316 Coverage over subject: 2-213 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g015203m | 411 | hhsearch probability: 100.00 Identity: 21% subject length: 248 Length of aligned reigon: 203 Coverage over query: 79-313 Coverage over subject: 2-210 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g018538m | 354 | hhsearch probability: 99.85 Identity: 20% subject length: 248 Length of aligned reigon: 142 Coverage over query: 111-311 Coverage over subject: 4-147 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] |
| 1g018524m | 354 | hhsearch probability: 100.00 Identity: 18% subject length: 248 Length of aligned reigon: 209 Coverage over query: 18-300 Coverage over subject: 1-210 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g018575m | 354 | hhsearch probability: 100.00 Identity: 18% subject length: 248 Length of aligned reigon: 209 Coverage over query: 18-300 Coverage over subject: 1-210 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g018562m | 354 | hhsearch probability: 100.00 Identity: 18% subject length: 248 Length of aligned reigon: 209 Coverage over query: 18-300 Coverage over subject: 1-210 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] |
| 1g022299m | 299 | hhsearch probability: 99.91 Identity: 25% subject length: 248 Length of aligned reigon: 178 Coverage over query: 70-297 Coverage over subject: 2-201 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g026355m | 240 | hhsearch probability: 99.87 Identity: 25% subject length: 248 Length of aligned reigon: 123 Coverage over query: 70-237 Coverage over subject: 2-126 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG4332, Uncharacterized protein conserved in bacteria [Function unknown] |
| 1g022339m | 298 | hhsearch probability: 99.94 Identity: 25% subject length: 248 Length of aligned reigon: 179 Coverage over query: 70-297 Coverage over subject: 2-201 |
COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown] COG0522, RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] COG2501, S4-like RNA binding protein [Replication, recombination, and repair] COG0130, TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] COG1471, RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] |
| 1g031089m | 166 | hhsearch probability: 100.00 Identity: 35% subject length: 248 Length of aligned reigon: 143 Coverage over query: 21-164 Coverage over subject: 99-243 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |
| 1g031054m | 166 | hhsearch probability: 100.00 Identity: 35% subject length: 248 Length of aligned reigon: 143 Coverage over query: 21-164 Coverage over subject: 99-243 |
COG1187, RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] COG0564, RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] |