| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1530 |
All predicted COG clusters |
|---|---|---|---|
| 1g002054m | 974 | hhsearch probability: 92.50 Identity: 34% subject length: 487 Length of aligned reigon: 62 Coverage over query: 680-742 Coverage over subject: 34-102 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] |
| 1g021034m | 318 | hhsearch probability: 90.94 Identity: 33% subject length: 487 Length of aligned reigon: 58 Coverage over query: 260-318 Coverage over subject: 33-98 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g010232m | 514 | hhsearch probability: 90.82 Identity: 29% subject length: 487 Length of aligned reigon: 62 Coverage over query: 372-435 Coverage over subject: 34-102 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g005707m | 681 | hhsearch probability: 90.56 Identity: 27% subject length: 487 Length of aligned reigon: 67 Coverage over query: 257-324 Coverage over subject: 32-103 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g015066m | 414 | hhsearch probability: 93.71 Identity: 29% subject length: 487 Length of aligned reigon: 73 Coverage over query: 260-333 Coverage over subject: 33-113 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g011538m | 483 | hhsearch probability: 91.02 Identity: 31% subject length: 487 Length of aligned reigon: 62 Coverage over query: 372-435 Coverage over subject: 34-102 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g002487m | 916 | hhsearch probability: 92.08 Identity: 24% subject length: 487 Length of aligned reigon: 62 Coverage over query: 761-824 Coverage over subject: 35-103 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] |
| 1g030170m | 182 | hhsearch probability: 92.18 Identity: 18% subject length: 487 Length of aligned reigon: 93 Coverage over query: 59-157 Coverage over subject: 11-106 |
COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2183, Tex Transcriptional accessory protein [Transcription] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] |
| 1g044309m | 259 | hhsearch probability: 94.42 Identity: 19% subject length: 487 Length of aligned reigon: 59 Coverage over query: 87-148 Coverage over subject: 37-102 |
COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] |
| 1g005716m | 681 | hhsearch probability: 97.04 Identity: 22% subject length: 487 Length of aligned reigon: 79 Coverage over query: 271-350 Coverage over subject: 34-120 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] |
| 1g005219m | 708 | hhsearch probability: 100.00 Identity: 36% subject length: 487 Length of aligned reigon: 451 Coverage over query: 75-666 Coverage over subject: 1-485 |
COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] |
| 1g004669m | 738 | hhsearch probability: 100.00 Identity: 37% subject length: 487 Length of aligned reigon: 479 Coverage over query: 75-704 Coverage over subject: 1-483 |
COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] |
| 1g007008m | 621 | hhsearch probability: 100.00 Identity: 37% subject length: 487 Length of aligned reigon: 406 Coverage over query: 75-621 Coverage over subject: 1-409 |
COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] |
| 1g004498m | 748 | hhsearch probability: 100.00 Identity: 36% subject length: 487 Length of aligned reigon: 480 Coverage over query: 75-705 Coverage over subject: 1-484 |
COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g006020m | 664 | hhsearch probability: 100.00 Identity: 37% subject length: 487 Length of aligned reigon: 437 Coverage over query: 75-652 Coverage over subject: 1-440 |
COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] |