| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG2739 |
All predicted COG clusters |
|---|---|---|---|
| 1g011992m | 473 | hhsearch probability: 96.75 Identity: 25% subject length: 105 Length of aligned reigon: 48 Coverage over query: 407-458 Coverage over subject: 16-63 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g009567m | 532 | hhsearch probability: 96.26 Identity: 25% subject length: 105 Length of aligned reigon: 48 Coverage over query: 466-517 Coverage over subject: 16-63 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g008652m | 558 | hhsearch probability: 96.42 Identity: 25% subject length: 105 Length of aligned reigon: 48 Coverage over query: 492-543 Coverage over subject: 16-63 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g008352m | 569 | hhsearch probability: 96.21 Identity: 25% subject length: 105 Length of aligned reigon: 48 Coverage over query: 503-554 Coverage over subject: 16-63 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g008556m | 561 | hhsearch probability: 96.34 Identity: 25% subject length: 105 Length of aligned reigon: 48 Coverage over query: 495-546 Coverage over subject: 16-63 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g009449m | 534 | hhsearch probability: 96.50 Identity: 31% subject length: 105 Length of aligned reigon: 49 Coverage over query: 470-522 Coverage over subject: 16-64 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g007404m | 605 | hhsearch probability: 96.51 Identity: 20% subject length: 105 Length of aligned reigon: 49 Coverage over query: 540-592 Coverage over subject: 16-64 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG3413, Predicted DNA binding protein [General function prediction only] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] |
| 1g010284m | 513 | hhsearch probability: 96.59 Identity: 24% subject length: 105 Length of aligned reigon: 46 Coverage over query: 452-501 Coverage over subject: 18-63 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010338m | 513 | hhsearch probability: 96.59 Identity: 24% subject length: 105 Length of aligned reigon: 46 Coverage over query: 452-501 Coverage over subject: 18-63 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010327m | 513 | hhsearch probability: 96.59 Identity: 24% subject length: 105 Length of aligned reigon: 46 Coverage over query: 452-501 Coverage over subject: 18-63 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g046578m | 379 | hhsearch probability: 97.14 Identity: 20% subject length: 105 Length of aligned reigon: 49 Coverage over query: 317-369 Coverage over subject: 17-65 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG3413, Predicted DNA binding protein [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair] |
| 1g010308m | 513 | hhsearch probability: 96.59 Identity: 24% subject length: 105 Length of aligned reigon: 46 Coverage over query: 452-501 Coverage over subject: 18-63 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g010835m | 499 | hhsearch probability: 96.92 Identity: 18% subject length: 105 Length of aligned reigon: 49 Coverage over query: 435-486 Coverage over subject: 16-64 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] |
| 1g010521m | 508 | hhsearch probability: 96.81 Identity: 18% subject length: 105 Length of aligned reigon: 50 Coverage over query: 444-496 Coverage over subject: 16-65 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g010527m | 508 | hhsearch probability: 96.81 Identity: 18% subject length: 105 Length of aligned reigon: 50 Coverage over query: 444-496 Coverage over subject: 16-65 |
COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] |
| 1g011454m | 485 | hhsearch probability: 97.09 Identity: 19% subject length: 105 Length of aligned reigon: 52 Coverage over query: 421-475 Coverage over subject: 16-67 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG3413, Predicted DNA binding protein [General function prediction only] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG2909, MalT ATP-dependent transcriptional regulator [Transcription] COG2390, DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription] |
| 1g009803m | 525 | hhsearch probability: 96.70 Identity: 20% subject length: 105 Length of aligned reigon: 49 Coverage over query: 460-512 Coverage over subject: 16-64 |
COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1342, Predicted DNA-binding proteins [General function prediction only] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] |
| 1g010092m | 518 | hhsearch probability: 96.74 Identity: 23% subject length: 105 Length of aligned reigon: 47 Coverage over query: 456-506 Coverage over subject: 17-63 |
COG0568, RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] COG1595, RpoE DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] COG4566, TtrR Response regulator [Signal transduction mechanisms] COG2771, CsgD DNA-binding HTH domain-containing proteins [Transcription] COG2197, CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] COG3413, Predicted DNA binding protein [General function prediction only] COG2739, Uncharacterized protein conserved in bacteria [Function unknown] COG1356, tfx Transcriptional regulator [DNA replication, recombination and repair] COG1342, Predicted DNA-binding proteins [General function prediction only] COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription] COG1191, FliA DNA-directed RNA polymerase specialized sigma subunit [Transcription] |