Psyllid ID: psy10065

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
MSTSIVHVQITMAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR
cccccHHHHHHHccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccEEccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccEEEEEcccccEEcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccc
ccccEEEEEEEEHcccccccccccHHHHccccccccccHHccccEEEccccccccEEEccccHHHHEEEcccccEEcccccHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccEEEccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccc
MSTSIVHVQITmaedwdadpaypsestggpvglssiaapaelpeiklfgrwscddvqvsdmSLQDYIAVKEKnakflphsagRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIInsgpredstrigragtvrrqavdvsplrrVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR
MSTSIVHVQITMAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIinsgpredstrigragtvrrqavdvsplrrvNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR
MSTSIVHVQITMAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR
*****VHVQITMA**********************IAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINS********IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA******
***************WDADPAYPSESTGG**********AELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRY**KRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELIN*AK*****
MSTSIVHVQITMAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR
***SIVHVQITMAEDWDA*******************A*AELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTSIVHVQITMAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQNR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query215 2.2.26 [Sep-21-2011]
Q24186228 40S ribosomal protein S5a yes N/A 0.911 0.859 0.822 1e-91
P46782204 40S ribosomal protein S5 yes N/A 0.827 0.872 0.888 3e-91
Q5E988204 40S ribosomal protein S5 yes N/A 0.827 0.872 0.888 3e-91
P97461204 40S ribosomal protein S5 yes N/A 0.823 0.867 0.887 1e-90
P24050204 40S ribosomal protein S5 yes N/A 0.841 0.887 0.856 6e-89
Q9VFE4230 40S ribosomal protein S5b no N/A 0.809 0.756 0.844 2e-86
P49041210 40S ribosomal protein S5 yes N/A 0.888 0.909 0.735 3e-83
Q08364210 40S ribosomal protein S5 N/A N/A 0.893 0.914 0.699 7e-80
O65731197 40S ribosomal protein S5 N/A N/A 0.795 0.868 0.773 1e-76
Q9ZUT9207 40S ribosomal protein S5- yes N/A 0.795 0.826 0.779 2e-76
>sp|Q24186|RS5A_DROME 40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=2 SV=1 Back     alignment and function desciption
 Score =  335 bits (860), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/197 (82%), Positives = 177/197 (89%), Gaps = 1/197 (0%)

Query: 19  DPAYPSESTGGPVGL-SSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFL 77
           +PA P E+      L +++ +  ELPEIKLFGRWSCDDV V+D+SLQDYI+VKEK A++L
Sbjct: 14  EPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYL 73

Query: 78  PHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPL 137
           PHSAGRYAAKRFRKAQCPIVERLT SLMM GRNN KKLMA RIVKH+FEIIHLLTGENPL
Sbjct: 74  PHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPL 133

Query: 138 QILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 197
           QILV+AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI
Sbjct: 134 QILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 193

Query: 198 AECVADELINAAKFNQN 214
           AEC+ADELINAAK + N
Sbjct: 194 AECLADELINAAKGSSN 210

Drosophila melanogaster (taxid: 7227)
>sp|P46782|RS5_HUMAN 40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4 Back     alignment and function description
>sp|Q5E988|RS5_BOVIN 40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3 Back     alignment and function description
>sp|P97461|RS5_MOUSE 40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3 Back     alignment and function description
>sp|P24050|RS5_RAT 40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=1 SV=3 Back     alignment and function description
>sp|Q9VFE4|RS5B_DROME 40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1 Back     alignment and function description
>sp|P49041|RS5_CAEEL 40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=3 SV=1 Back     alignment and function description
>sp|Q08364|RS5_PODCA 40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1 Back     alignment and function description
>sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query215
110671422221 putative S5e ribosomal protein [Diaphori 0.944 0.918 0.985 1e-114
242019255205 40S ribosomal protein S5, putative [Pedi 0.841 0.882 0.939 2e-95
322801454216 hypothetical protein SINV_07427 [Solenop 0.832 0.828 0.932 2e-95
307167667216 40S ribosomal protein S5 [Camponotus flo 0.832 0.828 0.932 2e-95
332026745216 40S ribosomal protein S5 [Acromyrmex ech 0.832 0.828 0.932 2e-95
66509908216 PREDICTED: 40S ribosomal protein S5 isof 0.920 0.916 0.857 3e-95
350417230216 PREDICTED: 40S ribosomal protein S5a-lik 0.902 0.898 0.865 6e-95
50344462212 S5e ribosomal protein [Timarcha balearic 0.902 0.915 0.857 6e-95
307645331199 ribosomal protein S5 [Micropterix calthe 0.855 0.924 0.913 1e-94
383863599216 PREDICTED: 40S ribosomal protein S5a-lik 0.902 0.898 0.865 2e-94
>gi|110671422|gb|ABG81962.1| putative S5e ribosomal protein [Diaphorina citri] Back     alignment and taxonomy information
 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/203 (98%), Positives = 201/203 (99%)

Query: 12  MAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKE 71
           MAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKE
Sbjct: 1   MAEDWDADPAYPSESTGGPVGLSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKE 60

Query: 72  KNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLL 131
           KNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLL
Sbjct: 61  KNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLL 120

Query: 132 TGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAF 191
           TGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAF
Sbjct: 121 TGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAF 180

Query: 192 RNIKTIAECVADELINAAKFNQN 214
           RNIKTIAECVADELINAAK + N
Sbjct: 181 RNIKTIAECVADELINAAKGSSN 203

Source: Diaphorina citri

Species: Diaphorina citri

Genus: Diaphorina

Family: Psyllidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242019255|ref|XP_002430077.1| 40S ribosomal protein S5, putative [Pediculus humanus corporis] gi|212515158|gb|EEB17339.1| 40S ribosomal protein S5, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|322801454|gb|EFZ22115.1| hypothetical protein SINV_07427 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307167667|gb|EFN61170.1| 40S ribosomal protein S5 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332026745|gb|EGI66854.1| 40S ribosomal protein S5 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|66509908|ref|XP_624084.1| PREDICTED: 40S ribosomal protein S5 isoform 2 [Apis mellifera] gi|380025811|ref|XP_003696661.1| PREDICTED: 40S ribosomal protein S5-like [Apis florea] Back     alignment and taxonomy information
>gi|350417230|ref|XP_003491320.1| PREDICTED: 40S ribosomal protein S5a-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|50344462|emb|CAH04317.1| S5e ribosomal protein [Timarcha balearica] Back     alignment and taxonomy information
>gi|307645331|gb|ADN83482.1| ribosomal protein S5 [Micropterix calthella] Back     alignment and taxonomy information
>gi|383863599|ref|XP_003707267.1| PREDICTED: 40S ribosomal protein S5a-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query215
ZFIN|ZDB-GENE-060825-73201 zgc:153322 "zgc:153322" [Danio 0.846 0.905 0.890 5.6e-84
ZFIN|ZDB-GENE-020419-12204 rps5 "ribosomal protein S5" [D 0.827 0.872 0.883 7.3e-84
UNIPROTKB|Q5E988204 RPS5 "40S ribosomal protein S5 0.827 0.872 0.888 1.2e-81
UNIPROTKB|E2RIQ8204 RPS5 "Uncharacterized protein" 0.827 0.872 0.888 1.2e-81
UNIPROTKB|P46782204 RPS5 "40S ribosomal protein S5 0.827 0.872 0.888 1.2e-81
UNIPROTKB|F2Z5E6204 RPS5 "Uncharacterized protein" 0.827 0.872 0.888 1.2e-81
FB|FBgn0002590228 RpS5a "Ribosomal protein S5a" 0.911 0.859 0.822 2.5e-81
MGI|MGI:1097682204 Rps5 "ribosomal protein S5" [M 0.823 0.867 0.887 6.6e-81
RGD|3601204 Rps5 "ribosomal protein S5" [R 0.823 0.867 0.875 1.2e-79
FB|FBgn0038277230 RpS5b "Ribosomal protein S5b" 0.809 0.756 0.844 4.3e-77
ZFIN|ZDB-GENE-060825-73 zgc:153322 "zgc:153322" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 162/182 (89%), Positives = 173/182 (95%)

Query:    33 LSSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKA 92
             +++  APAELPE+KLFGRWSC+DVQVSDMSLQDYIAVKE  AKF+PHSAGRYAAKRFRKA
Sbjct:     2 VATAPAPAELPEVKLFGRWSCEDVQVSDMSLQDYIAVKENYAKFIPHSAGRYAAKRFRKA 61

Query:    93 QCPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPRED 152
             QCPIVER+TNSLMMHGRNN KKLMAVRI+KHA EIIHLLTGENPLQ+LV AIINSGPRED
Sbjct:    62 QCPIVERVTNSLMMHGRNNGKKLMAVRIMKHAMEIIHLLTGENPLQVLVNAIINSGPRED 121

Query:   153 STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFN 212
             STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAK +
Sbjct:   122 STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGS 181

Query:   213 QN 214
              N
Sbjct:   182 SN 183
GO:0003735 "structural constituent of ribosome" evidence=IEA
GO:0005840 "ribosome" evidence=IEA
GO:0006412 "translation" evidence=IEA
GO:0003723 "RNA binding" evidence=IEA
GO:0015935 "small ribosomal subunit" evidence=IEA
GO:0005622 "intracellular" evidence=IEA
GO:0030529 "ribonucleoprotein complex" evidence=IEA
ZFIN|ZDB-GENE-020419-12 rps5 "ribosomal protein S5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E988 RPS5 "40S ribosomal protein S5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RIQ8 RPS5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P46782 RPS5 "40S ribosomal protein S5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z5E6 RPS5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0002590 RpS5a "Ribosomal protein S5a" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1097682 Rps5 "ribosomal protein S5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3601 Rps5 "ribosomal protein S5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0038277 RpS5b "Ribosomal protein S5b" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B0R8D0RS7_HALS3No assigned EC number0.43110.75340.7714yesN/A
A4FWF1RS7_METM5No assigned EC number0.48500.76270.8723yesN/A
Q54MA6RS5_DICDINo assigned EC number0.70760.78600.8894yesN/A
Q9YAU8RS7_AERPENo assigned EC number0.53890.76270.8yesN/A
B1YC67RS7_PYRNVNo assigned EC number0.49070.74410.7142yesN/A
P35026RS7_SULSONo assigned EC number0.50600.75340.8393yesN/A
P46782RS5_HUMANNo assigned EC number0.88880.82790.8725yesN/A
O65731RS5_CICARNo assigned EC number0.77320.79530.8680N/AN/A
P26783RS5_YEASTNo assigned EC number0.69460.76740.7333yesN/A
P14037RS7_METVSNo assigned EC number0.42610.80460.8917yesN/A
Q976B0RS7_SULTONo assigned EC number0.50650.68830.7628yesN/A
Q6LXI3RS7_METMPNo assigned EC number0.49100.76270.8723yesN/A
P49041RS5_CAEELNo assigned EC number0.73520.88830.9095yesN/A
Q8PUR6RS7_METMANo assigned EC number0.42070.74880.8518yesN/A
A1RSA1RS7_PYRILNo assigned EC number0.51530.74410.7142yesN/A
Q8U0M8RS7_PYRFUNo assigned EC number0.42850.75810.7581yesN/A
Q8TXJ3RS7_METKANo assigned EC number0.49700.78130.8527yesN/A
Q8SS72RS5_ENCCUNo assigned EC number0.48860.80930.8365yesN/A
Q9P3T6RS5B_SCHPONo assigned EC number0.67810.80.8472yesN/A
Q9VFE4RS5B_DROMENo assigned EC number0.84480.80930.7565noN/A
Q08364RS5_PODCANo assigned EC number0.69950.89300.9142N/AN/A
A6VGV4RS7_METM7No assigned EC number0.47300.76270.8723yesN/A
A8MBL5RS7_CALMQNo assigned EC number0.44240.75340.7232yesN/A
A0B563RS7_METTPNo assigned EC number0.41660.76740.8918yesN/A
Q24186RS5A_DROMENo assigned EC number0.82230.91160.8596yesN/A
P0CX01RS7_HALSANo assigned EC number0.43110.75340.7714yesN/A
P17198RS7_SULACNo assigned EC number0.50330.68370.7538yesN/A
P97461RS5_MOUSENo assigned EC number0.88700.82320.8676yesN/A
P32552RS7_HALMANo assigned EC number0.44510.73950.7718yesN/A
Q464Z2RS7_METBFNo assigned EC number0.40600.75340.8756yesN/A
Q8TRC2RS7_METACNo assigned EC number0.40850.74880.8518yesN/A
Q5E988RS5_BOVINNo assigned EC number0.88880.82790.8725yesN/A
B8D6G4RS7_DESK1No assigned EC number0.53330.68370.7424yesN/A
A0RUR1RS7_CENSYNo assigned EC number0.44940.77670.8391yesN/A
Q9ZUT9RS51_ARATHNo assigned EC number0.77900.79530.8260yesN/A
P24050RS5_RATNo assigned EC number0.85630.84180.8872yesN/A
O93631RS7_METBUNo assigned EC number0.39630.74880.8655yesN/A
Q8ZYK5RS7_PYRAENo assigned EC number0.50900.75340.7264yesN/A
O27130RS7_METTHNo assigned EC number0.44570.75810.8763yesN/A
Q7RVI1RS5_NEUCRNo assigned EC number0.74850.80460.8122N/AN/A
A9A9U5RS7_METM6No assigned EC number0.47300.76270.8723yesN/A
O14277RS5A_SCHPONo assigned EC number0.68820.78130.8275yesN/A
O28386RS7_ARCFUNo assigned EC number0.45930.78130.8659yesN/A
A6UV45RS7_META3No assigned EC number0.43020.78600.8989yesN/A
Q2NEK9RS7_METSTNo assigned EC number0.42420.75340.8663yesN/A
P51427RS52_ARATHNo assigned EC number0.76740.79530.8260noN/A
O24111RS5_NICPLNo assigned EC number0.83080.63250.8831N/AN/A
P54063RS7_METJANo assigned EC number0.49670.70690.7958yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
PTZ00091193 PTZ00091, PTZ00091, 40S ribosomal protein S5; Prov 1e-111
TIGR01028186 TIGR01028, S7_S5_E_A, ribosomal protein S7(archaea 5e-99
PRK04027195 PRK04027, PRK04027, 30S ribosomal protein S7P; Rev 1e-77
COG0049148 COG0049, RpsG, Ribosomal protein S7 [Translation, 8e-48
pfam00177149 pfam00177, Ribosomal_S7, Ribosomal protein S7p/S5e 9e-40
PRK05302156 PRK05302, PRK05302, 30S ribosomal protein S7; Vali 3e-12
TIGR01029154 TIGR01029, rpsG_bact, ribosomal protein S7, bacter 3e-12
CHL00053155 CHL00053, rps7, ribosomal protein S7 5e-10
>gnl|CDD|185439 PTZ00091, PTZ00091, 40S ribosomal protein S5; Provisional Back     alignment and domain information 
 Score =  314 bits (807), Expect = e-111
 Identities = 133/171 (77%), Positives = 150/171 (87%)

Query: 44  EIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNS 103
           E KLFG+WS DDVQVSD+SL+DYIAV  K + F+PH+AGRY  KRFRKAQCPIVERL NS
Sbjct: 5   EPKLFGKWSYDDVQVSDLSLKDYIAVTTKASVFVPHTAGRYQKKRFRKAQCPIVERLVNS 64

Query: 104 LMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVR 163
           LM HGRNN KKL+AVRIVKHAFEIIHLLT +NPLQ+LV A+ N GPREDSTR+G  G VR
Sbjct: 65  LMFHGRNNGKKLLAVRIVKHAFEIIHLLTDKNPLQVLVDAVQNGGPREDSTRVGSGGVVR 124

Query: 164 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
           RQAVDVSPLRRVNQAI+L+C GAREAAFRNIKTIAEC+ADE+INA+K + N
Sbjct: 125 RQAVDVSPLRRVNQAIYLICKGAREAAFRNIKTIAECLADEIINASKESSN 175

Length = 193
>gnl|CDD|211618 TIGR01028, S7_S5_E_A, ribosomal protein S7(archaeal)/S5(eukaryotic) Back     alignment and domain information
>gnl|CDD|235204 PRK04027, PRK04027, 30S ribosomal protein S7P; Reviewed Back     alignment and domain information
>gnl|CDD|223127 COG0049, RpsG, Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215771 pfam00177, Ribosomal_S7, Ribosomal protein S7p/S5e Back     alignment and domain information
>gnl|CDD|235398 PRK05302, PRK05302, 30S ribosomal protein S7; Validated Back     alignment and domain information
>gnl|CDD|233238 TIGR01029, rpsG_bact, ribosomal protein S7, bacterial/organelle Back     alignment and domain information
>gnl|CDD|176994 CHL00053, rps7, ribosomal protein S7 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 215
PTZ00091193 40S ribosomal protein S5; Provisional 100.0
PRK04027195 30S ribosomal protein S7P; Reviewed 100.0
TIGR01028186 S7_S5_E_A ribosomal protein S7(archaeal)/S5(eukary 100.0
KOG3291|consensus208 100.0
COG0049148 RpsG Ribosomal protein S7 [Translation, ribosomal 100.0
PRK05302156 30S ribosomal protein S7; Validated 100.0
TIGR01029154 rpsG_bact ribosomal protein S7, bacterial/organell 100.0
CHL00053155 rps7 ribosomal protein S7 100.0
PF00177148 Ribosomal_S7: Ribosomal protein S7p/S5e; InterPro: 100.0
>PTZ00091 40S ribosomal protein S5; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.1e-70  Score=463.58  Aligned_cols=173  Identities=77%  Similarity=1.177  Sum_probs=167.6

Q ss_pred             CcccceeccccCCCceeecCCcccceeccccccceecCCCCcccccccCccCChhHHHHHHHhhccccccchHHHHHHHH
Q psy10065         42 LPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIV  121 (215)
Q Consensus        42 ~~~~klF~kw~~~~v~v~D~~l~~yi~~~~k~~~~~phs~gr~~~krf~k~~~piverliN~LM~~g~n~GKK~~A~rIV  121 (215)
                      ..++|||||||++||+|+||||++||+++++.++++|||+|||++|+|+|++||||+||||.||++|+|+|||++|++||
T Consensus         3 ~~~~~lf~kw~~~~v~~~d~~l~~yi~~~~~~~~~~pht~gr~~~k~f~k~~~~iVerLiN~lM~~grn~GKK~~A~~IV   82 (193)
T PTZ00091          3 ANEPKLFGKWSYDDVQVSDLSLKDYIAVTTKASVFVPHTAGRYQKKRFRKAQCPIVERLVNSLMFHGRNNGKKLLAVRIV   82 (193)
T ss_pred             CccchhhCCcCcccCeecCcCHHHHhhcccCCceeeccccchhhcCccCcccCHHHHHHHHHHhccCccCCcHHHHHHHH
Confidence            45689999999999999999999999999988899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCChhHHHHHHHHhcCCccceEEeccCCeeeEEeeecChhHHHHHHHHHHHHHHHhhhcCCCCcHHHHH
Q psy10065        122 KHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECV  201 (215)
Q Consensus       122 ~~AfeiI~~~t~~nPiqVl~~AI~N~~P~~es~Rig~gG~~yqvPV~vsp~Rr~~lAiwlI~~~ar~~~~r~~ks~~e~L  201 (215)
                      |+||++|+++|++||+|||++||+|++|++|++|+++||++|||||||+|.||++|||+||++|||+++||++++|++||
T Consensus        83 ~~AfeiI~~~t~~nPiqVl~~AI~N~~P~~e~~ri~~GG~~yqvpVdVsp~Rr~~lAirwI~~~ar~~~fR~~ks~~e~L  162 (193)
T PTZ00091         83 KHAFEIIHLLTDKNPLQVLVDAVQNGGPREDSTRVGSGGVVRRQAVDVSPLRRVNQAIYLICKGAREAAFRNIKTIAECL  162 (193)
T ss_pred             HHHHHHHHHHHCCChHHHHHHHHHhCCCCeeeEEeecCCeEEEEeeecChHHHHHHHHHHHHHHHHhhcccCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999995555999999999999999999


Q ss_pred             HHHHHHHhcccCC
Q psy10065        202 ADELINAAKFNQN  214 (215)
Q Consensus       202 A~EII~Aa~~~g~  214 (215)
                      |+|||+|++|+|+
T Consensus       163 A~Eli~Aa~~~~~  175 (193)
T PTZ00091        163 ADEIINASKESSN  175 (193)
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999999965

>PRK04027 30S ribosomal protein S7P; Reviewed Back     alignment and domain information
>TIGR01028 S7_S5_E_A ribosomal protein S7(archaeal)/S5(eukaryotic) Back     alignment and domain information
>KOG3291|consensus Back     alignment and domain information
>COG0049 RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05302 30S ribosomal protein S7; Validated Back     alignment and domain information
>TIGR01029 rpsG_bact ribosomal protein S7, bacterial/organelle Back     alignment and domain information
>CHL00053 rps7 ribosomal protein S7 Back     alignment and domain information
>PF00177 Ribosomal_S7: Ribosomal protein S7p/S5e; InterPro: IPR023798 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
2zkq_g204 Structure Of A Mammalian Ribosomal 40s Subunit With 2e-92
3iz6_F200 Localization Of The Small Subunit Ribosomal Protein 4e-76
3izb_F225 Localization Of The Small Subunit Ribosomal Protein 7e-66
3jyv_G186 Structure Of The 40s Rrna And Proteins And PE TRNA 5e-65
3zey_2190 High-resolution Cryo-electron Microscopy Structure 5e-60
2xzm_G200 Crystal Structure Of The Eukaryotic 40s Ribosomal S 3e-58
3j0l_T192 Core Of Mammalian 80s Pre-Ribosome In Complex With 5e-58
1s1h_G150 Structure Of The Ribosomal 80s-Eef2-Sordarin Comple 6e-54
3j20_H215 Promiscuous Behavior Of Proteins In Archaeal Riboso 1e-33
1iqv_A218 Crystal Structure Analysis Of The Archaebacterial R 4e-33
1hus_A155 Ribosomal Protein S7 Length = 155 6e-07
1rss_A151 Ribosomal Protein S7 From Thermus Thermophilus Leng 4e-05
1fjg_G156 Structure Of The Thermus Thermophilus 30s Ribosomal 5e-05
1i94_G155 Crystal Structures Of The Small Ribosomal Subunit W 5e-05
1qd7_F135 Partial Model For 30s Ribosomal Subunit Length = 13 5e-05
1eg0_D146 Fitting Of Components With Known Structure Into An 6e-05
1fka_G151 Structure Of Functionally Activated Small Ribosomal 6e-05
3gty_S149 Promiscuous Substrate Recognition In Folding And As 2e-04
>pdb|2ZKQ|GG Chain g, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 204 Back     alignment and structure 
Iteration: 1

 Score =  334 bits (856), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/180 (88%), Positives = 170/180 (94%), Gaps = 2/180 (1%)
Query: 37  AAPA--ELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQC 94
           AAPA  E P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQC
Sbjct: 7   AAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQC 66
Query: 95  PIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDST 154
           PIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGENPLQ+LV AIINSGPREDST
Sbjct: 67  PIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
Query: 155 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKFNQN 214
           RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAK + N
Sbjct: 127 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSN 186
>pdb|3IZ6|F Chain F, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 200 Back     alignment and structure
>pdb|3IZB|F Chain F, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 225 Back     alignment and structure
>pdb|3JYV|G Chain G, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 186 Back     alignment and structure
>pdb|3ZEY|2 Chain 2, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 190 Back     alignment and structure
>pdb|2XZM|G Chain G, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 200 Back     alignment and structure
>pdb|3J0L|T Chain T, Core Of Mammalian 80s Pre-Ribosome In Complex With Trnas Fitted To A 9.8a Cryo-Em Map: Classic Pre State 1 Length = 192 Back     alignment and structure
>pdb|1S1H|G Chain G, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i. Length = 150 Back     alignment and structure
>pdb|3J20|H Chain H, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (30s Ribosomal Subunit) Length = 215 Back     alignment and structure
>pdb|1IQV|A Chain A, Crystal Structure Analysis Of The Archaebacterial Ribosomal Protein S7 Length = 218 Back     alignment and structure
>pdb|1HUS|A Chain A, Ribosomal Protein S7 Length = 155 Back     alignment and structure
>pdb|1RSS|A Chain A, Ribosomal Protein S7 From Thermus Thermophilus Length = 151 Back     alignment and structure
>pdb|1FJG|G Chain G, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin Length = 156 Back     alignment and structure
>pdb|1I94|G Chain G, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 Length = 155 Back     alignment and structure
>pdb|1QD7|F Chain F, Partial Model For 30s Ribosomal Subunit Length = 135 Back     alignment and structure
>pdb|1FKA|G Chain G, Structure Of Functionally Activated Small Ribosomal Subunit At 3.3 A Resolution Length = 151 Back     alignment and structure
>pdb|3GTY|S Chain S, Promiscuous Substrate Recognition In Folding And Assembly Activities Of The Trigger Factor Chaperone Length = 149 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query215
2zkq_g204 40S ribosomal protein S5E; protein-RNA complex, 40 1e-100
3u5c_F225 RP14, S2, YS8, 40S ribosomal protein S5; translati 4e-99
2xzm_G200 Ribosomal protein S7 containing protein; ribosome, 1e-98
1iqv_A218 Ribosomal protein S7; RNA-binding, decoding center 2e-91
3bbn_G155 Ribosomal protein S7; small ribosomal subunit, spi 5e-14
3gty_S149 TF, 30S ribosomal protein S7; chaperone-client com 5e-13
1hus_A155 Ribosomal protein S7; RNA-binding protein, decodin 6e-13
1rss_A151 Ribosomal protein S7; RNA-binding, translation; 1. 7e-13
3i1m_G179 30S ribosomal protein S7; ribosome structure, prot 8e-13
3r8n_G151 30S ribosomal protein S7; protein biosynthesis, RN 2e-12
>2zkq_g 40S ribosomal protein S5E; protein-RNA complex, 40S ribosomal subunit, ribosomal protei complex; 8.70A {Canis familiaris} Length = 204 Back     alignment and structure
 Score =  288 bits (738), Expect = e-100
 Identities = 157/177 (88%), Positives = 168/177 (94%)

Query: 34  SSIAAPAELPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQ 93
           ++  A AE P+IKLFG+WS DDVQ++D+SLQDYIAVKEK AK+LPHSAGRYAAKRFRKAQ
Sbjct: 6   TAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQ 65

Query: 94  CPIVERLTNSLMMHGRNNAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDS 153
           CPIVERLTNS+MMHGRNN KKLM VRIVKHAFEIIHLLTGENPLQ+LV AIINSGPREDS
Sbjct: 66  CPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDS 125

Query: 154 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 210
           TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAK
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAK 182
>3u5c_F RP14, S2, YS8, 40S ribosomal protein S5; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_F 3o30_D 3o2z_D 3u5g_F 3jyv_G* 2noq_F 1s1h_G 3iz6_F Length = 225 Back     alignment and structure
>2xzm_G Ribosomal protein S7 containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_G 3j0o_T 3j0l_T Length = 200 Back     alignment and structure
>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1 Length = 218 Back     alignment and structure
>3bbn_G Ribosomal protein S7; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1 Length = 155 Back     alignment and structure
>3gty_S TF, 30S ribosomal protein S7; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} Length = 149 Back     alignment and structure
>1hus_A Ribosomal protein S7; RNA-binding protein, decoding center,; 2.50A {Geobacillus stearothermophilus} SCOP: a.75.1.1 Length = 155 Back     alignment and structure
>1rss_A Ribosomal protein S7; RNA-binding, translation; 1.90A {Thermus thermophilus} SCOP: a.75.1.1 PDB: 1n32_G* 1i95_G* 1i96_G* 1i97_G* 1i94_G 1j5e_G* 1n33_G* 1n34_G 1n36_G 1pns_G 1pnx_G 1voq_G 1vos_G 1vov_G 1vox_G 1voz_G 2e5l_G 2zm6_G 3fic_G* 3mr8_G ... Length = 151 Back     alignment and structure
>3i1m_G 30S ribosomal protein S7; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_G* 3e1a_U 3e1c_U 1vs5_G 3i1o_G 3i1q_G 3i1s_G 3i1z_G 3i21_G 3izv_K* 3izw_K* 3kc4_G 3or9_G 3ora_G 3uoq_G* 2qal_G* 1p6g_G 1p87_G 2aw7_G 2avy_G ... Length = 179 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query215
3u5c_F225 RP14, S2, YS8, 40S ribosomal protein S5; translati 100.0
2xzm_G200 Ribosomal protein S7 containing protein; ribosome, 100.0
2zkq_g204 40S ribosomal protein S5E; protein-RNA complex, 40 100.0
1iqv_A218 Ribosomal protein S7; RNA-binding, decoding center 100.0
3r8n_G151 30S ribosomal protein S7; protein biosynthesis, RN 100.0
1rss_A151 Ribosomal protein S7; RNA-binding, translation; 1. 100.0
1hus_A155 Ribosomal protein S7; RNA-binding protein, decodin 100.0
3i1m_G179 30S ribosomal protein S7; ribosome structure, prot 100.0
3gty_S149 TF, 30S ribosomal protein S7; chaperone-client com 100.0
3bbn_G155 Ribosomal protein S7; small ribosomal subunit, spi 100.0
>3u5c_F RP14, S2, YS8, 40S ribosomal protein S5; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_F 3o30_D 3o2z_D 3u5g_F 3jyv_G* 2noq_F 1s1h_G 3iz6_F Back     alignment and structure
Probab=100.00  E-value=1e-67  Score=457.76  Aligned_cols=171  Identities=68%  Similarity=1.036  Sum_probs=165.1

Q ss_pred             CcccceeccccCCCceeecCCcccceeccccccceecCCCCcccccccCccCChhHHHHHHHhhccccccchHHHHHHHH
Q psy10065         42 LPEIKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRNNAKKLMAVRIV  121 (215)
Q Consensus        42 ~~~~klF~kw~~~~v~v~D~~l~~yi~~~~k~~~~~phs~gr~~~krf~k~~~piverliN~LM~~g~n~GKK~~A~rIV  121 (215)
                      +.++|||||||++||+|+||||++||+|+  +++++|||+|||++|||.|++||+|+||||+||++|+|+|||++|++||
T Consensus        37 ~~~~~lf~kw~~~~v~v~d~~l~~yi~~~--~~~~~pht~gr~~~krf~K~~~piv~rliN~LM~~~~~~GKKs~A~~Iv  114 (225)
T 3u5c_F           37 QTEIKLFNKWSFEEVEVKDASLVDYVQVR--QPIFVAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRII  114 (225)
T ss_dssp             HHSSCCSSSCCCSSCCCSSTTTBTTBCCC--SCCSSSCCCCCCSSSTTGGGGSCHHHHHHHHHSCSGGGSSCHHHHHHHH
T ss_pred             chhhhhcCCCCCcceEEeccchhheeecc--CCceecccCCCccccCCCCCCCcHHHHHHHHHHhcCccCCcHHHHHHHH
Confidence            56899999999999999999999999998  2489999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCChhHHHHHHHHhcCCccceEEeccCCeeeEEeeecChhHHHHHHHHHHHHHHHhhhcCCCCcHHHHH
Q psy10065        122 KHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECV  201 (215)
Q Consensus       122 ~~AfeiI~~~t~~nPiqVl~~AI~N~~P~~es~Rig~gG~~yqvPV~vsp~Rr~~lAiwlI~~~ar~~~~r~~ks~~e~L  201 (215)
                      |+||++|+++|++|||+||++||+|++|++|++|+|+||++|||||+|+|.||++|||+||+++||+++||++++|++||
T Consensus       115 y~AfeiI~~kT~~nPl~Vl~~AI~Nv~P~vesrRvg~gG~tyqVPVeV~p~Rr~~LAiRWIi~aark~~~R~~ksmaerL  194 (225)
T 3u5c_F          115 KHTLDIINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETL  194 (225)
T ss_dssp             HHHHHHHHHTTCSCHHHHHHHHHHTTSCSEEEECCCSSSSCCCEEEECCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred             HHHHHHHHHhcCCCceeHHHHHHHhCCCCeeEEEeccCCEEEEEeeecCHHHHHHHHHHHHHHHHHhhccCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999995555999999999999999999


Q ss_pred             HHHHHHHhcccCC
Q psy10065        202 ADELINAAKFNQN  214 (215)
Q Consensus       202 A~EII~Aa~~~g~  214 (215)
                      |+|||||++|+|+
T Consensus       195 A~ELidAa~~~G~  207 (225)
T 3u5c_F          195 AEELINAAKGSST  207 (225)
T ss_dssp             HHHHHHHHTTCSS
T ss_pred             HHHHHHHHhCCCc
Confidence            9999999999996
>2xzm_G Ribosomal protein S7 containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_G 3j0o_T 3j0l_T Back     alignment and structure
>2zkq_g 40S ribosomal protein S5E; protein-RNA complex, 40S ribosomal subunit, ribosomal protei complex; 8.70A {Canis familiaris} Back     alignment and structure
>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1 Back     alignment and structure
>1rss_A Ribosomal protein S7; RNA-binding, translation; 1.90A {Thermus thermophilus} SCOP: a.75.1.1 PDB: 1n32_G* 1i95_G* 1i96_G* 1i97_G* 1i94_G 1j5e_G* 1n33_G* 1n34_G 1n36_G 1pns_G 1pnx_G 1voq_G 1vos_G 1vov_G 1vox_G 1voz_G 2e5l_G 2zm6_G 3fic_G* 3mr8_G ... Back     alignment and structure
>1hus_A Ribosomal protein S7; RNA-binding protein, decoding center,; 2.50A {Geobacillus stearothermophilus} SCOP: a.75.1.1 Back     alignment and structure
>3i1m_G 30S ribosomal protein S7; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_G* 3e1a_U 3e1c_U 1vs5_G 3i1o_G 3i1q_G 3i1s_G 3i1z_G 3i21_G 3izv_K* 3izw_K* 3kc4_G 3or9_G 3ora_G 3uoq_G* 4gaq_G* 4gas_G* 2qal_G* 1p6g_G 1p87_G ... Back     alignment and structure
>3gty_S TF, 30S ribosomal protein S7; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} Back     alignment and structure
>3bbn_G Ribosomal protein S7; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 215
d1iqva_201 a.75.1.1 (A:) Ribosomal protein S7 {Archaeon Pyroc 6e-70
d1husa_139 a.75.1.1 (A:) Ribosomal protein S7 {Bacillus stear 5e-28
d1rssa_145 a.75.1.1 (A:) Ribosomal protein S7 {Thermus thermo 4e-27
d2qalg1150 a.75.1.1 (G:2-151) Ribosomal protein S7 {Escherich 1e-25
>d1iqva_ a.75.1.1 (A:) Ribosomal protein S7 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 201 Back     information, alignment and structure

class: All alpha proteins
fold: Ribosomal protein S7
superfamily: Ribosomal protein S7
family: Ribosomal protein S7
domain: Ribosomal protein S7
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  210 bits (535), Expect = 6e-70
 Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 19/182 (10%)

Query: 45  IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSL 104
           IK+ GRWS +DV+V D SL+ YI ++    + LPH+ GR+A K F KA   IVERL N +
Sbjct: 1   IKVMGRWSTEDVEVKDPSLKPYINLE---PRLLPHTHGRHAKKHFGKANVHIVERLINKV 57

Query: 105 MMHGRN----------------NAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSG 148
           M  G +                N+KK+ A  +VK AF+II   TG+NP+Q+LV AI N+ 
Sbjct: 58  MRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAA 117

Query: 149 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 208
           PRED+T +   G     AVD+SPLRR++ A+  +  GA    +R   + AE +A+E+I A
Sbjct: 118 PREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILA 177

Query: 209 AK 210
           A 
Sbjct: 178 AN 179
>d1husa_ a.75.1.1 (A:) Ribosomal protein S7 {Bacillus stearothermophilus [TaxId: 1422]} Length = 139 Back     information, alignment and structure
>d1rssa_ a.75.1.1 (A:) Ribosomal protein S7 {Thermus thermophilus [TaxId: 274]} Length = 145 Back     information, alignment and structure
>d2qalg1 a.75.1.1 (G:2-151) Ribosomal protein S7 {Escherichia coli [TaxId: 562]} Length = 150 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query215
d1iqva_201 Ribosomal protein S7 {Archaeon Pyrococcus horikosh 100.0
d2qalg1150 Ribosomal protein S7 {Escherichia coli [TaxId: 562 100.0
d1husa_139 Ribosomal protein S7 {Bacillus stearothermophilus 100.0
d1rssa_145 Ribosomal protein S7 {Thermus thermophilus [TaxId: 100.0
>d1iqva_ a.75.1.1 (A:) Ribosomal protein S7 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
class: All alpha proteins
fold: Ribosomal protein S7
superfamily: Ribosomal protein S7
family: Ribosomal protein S7
domain: Ribosomal protein S7
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=3.3e-66  Score=440.72  Aligned_cols=168  Identities=46%  Similarity=0.694  Sum_probs=143.7

Q ss_pred             cceeccccCCCceeecCCcccceeccccccceecCCCCcccccccCccCChhHHHHHHHhhccccc--------------
Q psy10065         45 IKLFGRWSCDDVQVSDMSLQDYIAVKEKNAKFLPHSAGRYAAKRFRKAQCPIVERLTNSLMMHGRN--------------  110 (215)
Q Consensus        45 ~klF~kw~~~~v~v~D~~l~~yi~~~~k~~~~~phs~gr~~~krf~k~~~piverliN~LM~~g~n--------------  110 (215)
                      ||||||||++||+|+||||++||+|+|   .++|||+|||++|+|.|++|||||||||.||++|+|              
T Consensus         1 iklf~kw~~~~v~v~d~~l~~yi~~~~---~~~pht~gr~~~~~f~k~~~~iVERlin~lM~~G~~~~~~~~~~~~~~h~   77 (201)
T d1iqva_           1 IKVMGRWSTEDVEVKDPSLKPYINLEP---RLLPHTHGRHAKKHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHR   77 (201)
T ss_dssp             CCBTTTBCCTTCCCCCTTTGGGSBCSC---C------------------CBHHHHHHHHHHTTCCC--------------
T ss_pred             CCccCCcCCccceEcCcchhheeecCc---eeecccccchhhhhcccccchHHHHHHHHhhhccccccccccccchhccc
Confidence            799999999999999999999999999   689999999999999999999999999999999998              


Q ss_pred             --cchHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHhcCCccceEEeccCCeeeEEeeecChhHHHHHHHHHHHHHHHh
Q psy10065        111 --NAKKLMAVRIVKHAFEIIHLLTGENPLQILVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE  188 (215)
Q Consensus       111 --~GKK~~A~rIV~~AfeiI~~~t~~nPiqVl~~AI~N~~P~~es~Rig~gG~~yqvPV~vsp~Rr~~lAiwlI~~~ar~  188 (215)
                        +|||++|++||++||++|+++|++||++||++||+|++|++|++++++||++|||||||+|.||++|||+||++||++
T Consensus        78 ~~~GKK~~A~kIv~~A~~iI~~kt~~nPl~Vl~~AI~N~~P~~Ev~~~r~GG~~yqvPv~vsp~Rr~~lAirwI~~~ar~  157 (201)
T d1iqva_          78 SLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASA  157 (201)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHSCSCEEEEEEETTEEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCccHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHhhcceEEEEEEecCCcccccCeeeCHHHHHHHHHHHHHHHHHH
Confidence              899999999999999999999999999999999999999999999999999999999999999999999555599999


Q ss_pred             hhcCCCCcHHHHHHHHHHHHhcccCCC
Q psy10065        189 AAFRNIKTIAECVADELINAAKFNQNR  215 (215)
Q Consensus       189 ~~~r~~ks~~e~LA~EII~Aa~~~g~s  215 (215)
                      +++|+.++|++|||+|||+|++|+|++
T Consensus       158 ~~~r~~ks~~e~LA~Eii~Aa~~~~ks  184 (201)
T d1iqva_         158 KCYRTKMSFAEALAEEIILAANKDPKS  184 (201)
T ss_dssp             HHHHSSSCHHHHHHHHHHHHHTTCTTC
T ss_pred             hcCCCCCCHHHHHHHHHHHHHcCCCCc
Confidence            999999999999999999999998764
>d2qalg1 a.75.1.1 (G:2-151) Ribosomal protein S7 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1husa_ a.75.1.1 (A:) Ribosomal protein S7 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1rssa_ a.75.1.1 (A:) Ribosomal protein S7 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure