Psyllid ID: psy10072

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIGHNMS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHccccHHHHHHHHcccccccccccccccccccHHHHHccccccccccccHHccccHHHHcc
Secondary Structure Prediction (SSPRO)
HHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccccHHHHccEEEEEccccc
Coil and Loop (DISEMBL)
mrnhirthtgekpykctfcpftaahsstMSYHLRIHqdlkvkcphcaykcvkqkdlnthierrhmpgdvLGHIQQMLEIGHNMS
Flexible Loop (DISEMBL)
mrnhirthtgekpykctFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIGHNMS
Low Complexity Region (SEG)
MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIGHNMS
Disordered region (IsUnstruct)
************PYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVK********************************
Disordered Region (DISOPRED)
MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIGHN**
Disordered Region (DISEMBL)
********TGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIGHNMS
Disordered Region (DISPRO)
MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIG****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQMLEIGHNMS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	84	2.2.26 [Sep-21-2011]
Q7TS63	1237	Zinc finger protein ZFAT	yes	N/A	0.738	0.050	0.406	2e-09
Q9P243	1243	Zinc finger protein ZFAT	no	N/A	0.738	0.049	0.406	3e-09
O54963	1069	RE1-silencing transcripti	no	N/A	0.726	0.057	0.387	5e-09
P52746	1687	Zinc finger protein 142 O	no	N/A	0.702	0.034	0.466	9e-09
Q6DBW0	419	Zinc finger protein Pegas	no	N/A	0.726	0.145	0.435	2e-08
Q9JKD9	465	Zinc finger and BTB domai	no	N/A	0.773	0.139	0.393	2e-08
Q13127	1097	RE1-silencing transcripti	no	N/A	0.726	0.055	0.387	3e-08
Q5ZLR2	421	Zinc finger protein Pegas	no	N/A	0.726	0.144	0.419	6e-08
Q9NPA5	681	Zinc finger protein 64 ho	no	N/A	0.797	0.098	0.442	7e-08
A4IFJ6	419	Zinc finger protein Pegas	no	N/A	0.726	0.145	0.419	7e-08

>sp|Q7TS63|ZFAT_MOUSE Zinc finger protein ZFAT OS=Mus musculus GN=Zfat PE=1 SV=2

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           ++ H+R HT EKPYKC+ C + +A  + ++ HLR H   K  C +C++ C+ +  L  HI
Sbjct: 286 LQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHI 345

Query: 61  ERRH 64
           ER H
Sbjct: 346 ERVH 349

May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated.
Mus musculus (taxid: 10090)

>sp|Q9P243|ZFAT_HUMAN Zinc finger protein ZFAT OS=Homo sapiens GN=ZFAT PE=1 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           ++ H+R HT EKPYKC  C + +A  + ++ HLR H   K  C +C++ C+ +  L  HI
Sbjct: 286 LQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHI 345

Query: 61  ERRH 64
           ER H
Sbjct: 346 ERVH 349

May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated.

Homo sapiens (taxid: 9606)

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER 62
           H+RTHTGE+PYKC  CP++++  + ++ H+R H   K  KC  C Y    Q ++  H  +
Sbjct: 293 HVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQ 352

Query: 63  RH 64
            H
Sbjct: 353 VH 354

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Rattus norvegicus (taxid: 10116)

>sp|P52746|ZN142_HUMAN Zinc finger protein 142 OS=Homo sapiens GN=ZNF142 PE=2 SV=4

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 4    HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
            H R HTGEKPY C  CP+  A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct: 1470 HSRIHTGEKPYHCHLCPYACADPSRLKYHMRIHKEERKYLCPECGYKCKWVNQLKYHMTK 1529

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6DBW0|IKZF5_DANRE Zinc finger protein Pegasus OS=Danio rerio GN=ikzf5 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER 62
           HIR HTGEKP++C  CPF +A+   +  H+R H   K  KC  C+++C  + +L+ H  R
Sbjct: 97  HIRIHTGEKPHRCHLCPFASAYERHLEAHMRSHTGEKPYKCELCSFRCSDRSNLSHHRRR 156

Query: 63  RH 64
           RH
Sbjct: 157 RH 158

DNA-binding protein that binds to the 5'GNNTGTNG-3' core sequence. Transcriptional repressor.

Danio rerio (taxid: 7955)

>sp|Q9JKD9|ZBT32_MOUSE Zinc finger and BTB domain-containing protein 32 OS=Mus musculus GN=Zbtb32 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           M  H R HTGEKP+ C+ CP  +   S M+ HLR H     +CP C   C     +  H+
Sbjct: 365 METHYRVHTGEKPFSCSLCPQRSRDFSAMTKHLRTHGAAPYRCPLCRAGCPSLASMQAHM 424

Query: 61  ERRHMP 66
            R H P
Sbjct: 425 -RGHSP 429

DNA-binding protein that binds to the to a 5'-TGTACAGTGT-3' core sequence. May function as a transcriptional transactivator and transcriptional repressor (By similarity). Probably exerts its repressor effect by preventing GATA3 from binding to DNA. May play a role in regulating the differentiation and activation of helper T-cells.

Mus musculus (taxid: 10090)

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER 62
           H+RTHTGE+PYKC  CP++++  + ++ H+R H   K  KC  C+Y    Q ++  H  +
Sbjct: 294 HVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQ 353

Query: 63  RH 64
            H
Sbjct: 354 VH 355

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Homo sapiens (taxid: 9606)

>sp|Q5ZLR2|IKZF5_CHICK Zinc finger protein Pegasus OS=Gallus gallus GN=IKZF5 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER 62
           HIR HTGEKP++C  CPF +A+   +  H+R H   K  KC  C+++C  + +L+ H  R
Sbjct: 100 HIRIHTGEKPHRCHLCPFASAYERHLEAHMRSHTGEKPYKCELCSFRCSDRSNLSHHRRR 159

Query: 63  RH 64
           +H
Sbjct: 160 KH 161

DNA-binding protein that binds to the 5'GNNTGTNG-3' core sequence. Transcriptional repressor.

Gallus gallus (taxid: 9031)

>sp|Q9NPA5|ZF64A_HUMAN Zinc finger protein 64 homolog, isoforms 1 and 2 OS=Homo sapiens GN=ZFP64 PE=1 SV=3

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH 59
           ++ H+R HTG KPYKC  C + AA SS+++ HLRIH D +  KC  C Y       L  H
Sbjct: 190 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 249

Query: 60  IERRHMPGDV 69
           + R H  GD 
Sbjct: 250 L-RSHT-GDA 257

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A4IFJ6|IKZF5_BOVIN Zinc finger protein Pegasus OS=Bos taurus GN=IKZF5 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER 62
           HIR HTGEKP++C  CPF +A+   +  H+R H   K  KC  C+++C  + +L+ H  R
Sbjct: 100 HIRIHTGEKPHRCHLCPFASAYERHLEAHMRSHTGEKPYKCELCSFRCSDRSNLSHHRRR 159

Query: 63  RH 64
           +H
Sbjct: 160 KH 161

DNA-binding protein that binds to the 5'GNNTGTNG-3' core sequence. Transcriptional repressor.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
308481332	350	hypothetical protein CRE_31234 [Caenorha	0.726	0.174	0.442	2e-09
327269310	1241	PREDICTED: zinc finger protein ZFAT-like	0.738	0.049	0.406	1e-08
118601156	1198	zinc finger and AT hook domain containin	0.75	0.052	0.406	1e-08
432908270	1135	PREDICTED: zinc finger protein ZFAT-like	0.702	0.051	0.435	1e-08
449495195	1232	PREDICTED: zinc finger protein ZFAT [Tae	0.738	0.050	0.406	2e-08
427795957	211	Putative re1-silencing transcription fac	0.714	0.284	0.491	2e-08
113931316	234	novel zinc finger protein [Xenopus (Silu	0.797	0.286	0.405	2e-08
111307825	222	LOC733928 protein [Xenopus (Silurana) tr	0.797	0.301	0.405	2e-08
260801935	258	hypothetical protein BRAFLDRAFT_147142 [	0.702	0.228	0.466	2e-08
391326883	567	PREDICTED: uncharacterized protein LOC10	0.821	0.121	0.436	3e-08

>gi|308481332|ref|XP_003102871.1| hypothetical protein CRE_31234 [Caenorhabditis remanei] gi|308260574|gb|EFP04527.1| hypothetical protein CRE_31234 [Caenorhabditis remanei]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 40/61 (65%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERR 63
           H+RTHTGEKP+ CT C  +   + T+  H+RIH  +K+KC HC + C +   L  H++R+
Sbjct: 218 HLRTHTGEKPFNCTKCSSSFTQNRTLLRHMRIHSGIKLKCKHCEFDCFRPAGLAEHVKRK 277

Query: 64  H 64
           H
Sbjct: 278 H 278

Source: Caenorhabditis remanei

Species: Caenorhabditis remanei

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|327269310|ref|XP_003219437.1| PREDICTED: zinc finger protein ZFAT-like [Anolis carolinensis]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           ++ H+R HT EKPYKC+FC + +A  + ++ HLR H   K  C +C + C+ +  L  H+
Sbjct: 285 LQAHLRIHTNEKPYKCSFCSYASAIKANLNVHLRKHTGEKFACDYCPFTCLSKGHLKVHV 344

Query: 61  ERRH 64
           ER H
Sbjct: 345 ERVH 348

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|118601156|ref|NP_001073041.1| zinc finger and AT hook domain containing [Xenopus (Silurana) tropicalis] gi|111305925|gb|AAI21282.1| zinc finger and AT hook domain containing [Xenopus (Silurana) tropicalis]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           ++ H+R HT EKPYKC+ C + +A  + +S H+R H   K  C HC + C+ +  L  H+
Sbjct: 266 LQAHLRIHTKEKPYKCSLCSYASAIKANLSVHMRKHTGEKFSCDHCTFSCLSKGHLKVHV 325

Query: 61  ERRH 64
           ER H
Sbjct: 326 ERVH 329

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432908270|ref|XP_004077797.1| PREDICTED: zinc finger protein ZFAT-like [Oryzias latipes]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERR 63
           H+RTHT EKP+KC  C + +A  + ++ HLR H   +  CPHC++ C+    L  HIER 
Sbjct: 288 HLRTHTQEKPFKCPHCDYASAIKANLNVHLRKHTGERFTCPHCSFSCLSPGHLKVHIERV 347

Query: 64  HM 65
           H+
Sbjct: 348 HL 349

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449495195|ref|XP_002188278.2| PREDICTED: zinc finger protein ZFAT [Taeniopygia guttata]

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           ++ H+R HT EKPYKC++C + +A  + ++ HLR H   K  C +C + C+ +  L  HI
Sbjct: 271 LQAHLRIHTNEKPYKCSYCSYASAIKANLNVHLRKHTGEKFSCDYCTFTCLSKGHLKVHI 330

Query: 61  ERRH 64
           ER H
Sbjct: 331 ERVH 334

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427795957|gb|JAA63430.1| Putative re1-silencing transcription factor, partial [Rhipicephalus pulchellus]

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH 59
           ++ H  TH GEKPYKCTFCP+TAA  S +  H+R H   K   C HC YKC ++  L +H
Sbjct: 98  LKIHRLTHIGEKPYKCTFCPYTAAEKSDLVTHVRTHTGEKPFTCKHCPYKCARKSHLASH 157

Query: 60  I 60
           +
Sbjct: 158 M 158

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|113931316|ref|NP_001039107.1| novel zinc finger protein [Xenopus (Silurana) tropicalis] gi|89268765|emb|CAJ83131.1| novel zinc finger protein [Xenopus (Silurana) tropicalis]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 3   NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE 61
            H+R HTGEKP+KC  C + +  +S++  H+R H   K  KC  C+Y C+++K L+ H+ 
Sbjct: 129 QHMRVHTGEKPFKCKLCSYASIDASSLRRHIRTHTSEKPYKCQQCSYSCIQKKSLDLHV- 187

Query: 62  RRHMPGDVL 70
           RRH  G++ 
Sbjct: 188 RRHHTGEMF 196

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|111307825|gb|AAI21338.1| LOC733928 protein [Xenopus (Silurana) tropicalis]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 3   NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE 61
            H+R HTGEKP+KC  C + +  +S++  H+R H   K  KC  C+Y C+++K L+ H+ 
Sbjct: 117 QHMRVHTGEKPFKCKLCSYASIDASSLRRHIRTHTSEKPYKCQQCSYSCIQKKSLDLHV- 175

Query: 62  RRHMPGDVL 70
           RRH  G++ 
Sbjct: 176 RRHHTGEMF 184

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260801935|ref|XP_002595850.1| hypothetical protein BRAFLDRAFT_147142 [Branchiostoma floridae] gi|229281099|gb|EEN51862.1| hypothetical protein BRAFLDRAFT_147142 [Branchiostoma floridae]

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQ-DLKVKCPHCAYKCVKQKDLNTHIER 62
           H+RTHTGE+PYKC  C ++ AHSST+  H+ IH+ + + +CPHC Y  V+++ L  H+ +
Sbjct: 82  HVRTHTGERPYKCPVCDWSFAHSSTLGTHMDIHRGNKRFQCPHCDYASVRKECLRLHLSK 141

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391326883|ref|XP_003737939.1| PREDICTED: uncharacterized protein LOC100898961 [Metaseiulus occidentalis]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH 59
           +R H R HTGE+P+KC  C ++++ SS +  HL+ H D +  KC  C Y C +   LNTH
Sbjct: 41  LRTHKRVHTGERPFKCHLCSYSSSQSSNLQQHLKRHSDERPFKCNLCEYSCKRGHQLNTH 100

Query: 60  IERRHMPGDVL 70
             R H+P D+L
Sbjct: 101 -RRTHIPRDIL 110

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
UNIPROTKB|E1C418	150	E1C418 "Uncharacterized protei	0.869	0.486	0.389	1e-11
UNIPROTKB|E1BVZ6	1746	E1BVZ6 "Uncharacterized protei	0.702	0.033	0.5	1.6e-11
ZFIN|ZDB-GENE-040801-209	419	ikzf5 "IKAROS family zinc fing	0.892	0.178	0.397	5e-11
UNIPROTKB|F1SRY7	1430	ZNF142 "Uncharacterized protei	0.702	0.041	0.466	5.4e-11
UNIPROTKB|I3LF03	1548	LOC100626772 "Uncharacterized	0.702	0.038	0.466	5.9e-11
UNIPROTKB|E2REA6	1747	ZNF142 "Uncharacterized protei	0.702	0.033	0.466	6.8e-11
UNIPROTKB|E1BNL0	1848	ZNF142 "Uncharacterized protei	0.702	0.031	0.466	7.2e-11
UNIPROTKB|J9P6V2	1849	ZNF142 "Uncharacterized protei	0.702	0.031	0.466	7.2e-11
UNIPROTKB|O42424	179	ZNF6 "ZNF6 protein" [Gallus ga	0.726	0.340	0.428	9.4e-11
UNIPROTKB|E1BYF2	1242	ZFAT "Uncharacterized protein"	0.761	0.051	0.390	9.4e-11

UNIPROTKB|E1C418 E1C418 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 30/77 (38%), Positives = 44/77 (57%)

Query:     1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTH 59
             +  H+RTHTGEKPY+CT C F  +    +  H R+H QD   +C  C Y+C + ++L  H
Sbjct:    25 LTRHLRTHTGEKPYRCTGCSFACSSLGNLKRHERVHSQDKPFQCAACDYRCNQSRNLKRH 84

Query:    60 IERRHMP-GDVLGHIQQ 75
             +    +P G+  G  QQ
Sbjct:    85 MLSHRLPEGE--GQHQQ 99

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BVZ6 E1BVZ6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 30/60 (50%), Positives = 37/60 (61%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
             HIR HTGEKPYKC  C +T A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct:  1519 HIRIHTGEKPYKCHLCKYTCADPSRLKYHMRIHKEERKYLCPDCGYKCKWVNQLKYHMTK 1578

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-040801-209 ikzf5 "IKAROS family zinc finger 5" [Danio rerio (taxid:7955)]

 Score = 160 (61.4 bits), Expect = 5.0e-11, P = 5.0e-11
 Identities = 33/83 (39%), Positives = 48/83 (57%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER 62
             HIR HTGEKP++C  CPF +A+   +  H+R H   K  KC  C+++C  + +L+ H  R
Sbjct:    97 HIRIHTGEKPHRCHLCPFASAYERHLEAHMRSHTGEKPYKCELCSFRCSDRSNLSHHRRR 156

Query:    63 RH----MPG--DVLGHIQQMLEI 79
             RH    M G    L H ++ML +
Sbjct:   157 RHKLLPMKGARSALSH-RKMLSV 178

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1SRY7 ZNF142 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 167 (63.8 bits), Expect = 5.4e-11, P = 5.4e-11
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
             H R HTGEKPY+C  CP+  A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct:  1213 HSRIHTGEKPYRCHLCPYACADPSRLKYHMRIHKEERKYLCPDCGYKCKWVNQLKYHMTK 1272

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3LF03 LOC100626772 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 167 (63.8 bits), Expect = 5.9e-11, P = 5.9e-11
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
             H R HTGEKPY+C  CP+  A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct:  1331 HSRIHTGEKPYRCHLCPYACADPSRLKYHMRIHKEERKYLCPDCGYKCKWVNQLKYHMTK 1390

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2REA6 ZNF142 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 167 (63.8 bits), Expect = 6.8e-11, P = 6.8e-11
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
             H R HTGEKPY+C  CP+  A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct:  1530 HSRIHTGEKPYRCHLCPYACADPSRLKYHMRIHKEERKYLCPDCGYKCKWVNQLKYHMTK 1589

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1BNL0 ZNF142 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
             H R HTGEKPY+C  CP+  A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct:  1631 HSRIHTGEKPYRCHLCPYACADPSRLKYHMRIHKEERKYLCPDCGYKCKWVNQLKYHMTK 1690

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P6V2 ZNF142 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 167 (63.8 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:     4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH-QDLKVKCPHCAYKCVKQKDLNTHIER 62
             H R HTGEKPY+C  CP+  A  S + YH+RIH ++ K  CP C YKC     L  H+ +
Sbjct:  1632 HSRIHTGEKPYRCHLCPYACADPSRLKYHMRIHKEERKYLCPDCGYKCKWVNQLKYHMTK 1691

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|O42424 ZNF6 "ZNF6 protein" [Gallus gallus (taxid:9031)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 27/63 (42%), Positives = 36/63 (57%)

Query:     1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRI-H-QDLKVKCPHCAYKCVKQKDLNT 58
             ++ H+RTHTGEKPY+C  C F  A  S +  H++  H  DL  KC HC      +K+L  
Sbjct:   114 LKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGNDLPFKCEHCPQAFTDEKELQQ 173

Query:    59 HIE 61
             H E
Sbjct:   174 HTE 176

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E1BYF2 ZFAT "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 164 (62.8 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 25/64 (39%), Positives = 40/64 (62%)

Query:     1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
             ++ H+R HT EKPYKC++C + +A  + ++ H+R H   K  C +C + C+ +  L  HI
Sbjct:   282 LQAHLRIHTNEKPYKCSYCNYASAIKANLNVHMRKHTGEKFSCDYCTFTCLSKGHLKVHI 341

Query:    61 ERRH 64
             ER H
Sbjct:   342 ERVH 345

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0002244 "hematopoietic progenitor cell differentiation" evidence=IEA

GO:0060712 "spongiotrophoblast layer development" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	84
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 32.4 bits (74), Expect = 0.002
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 1  MRNHIRTHTGEKPYKCTFCPFTAAH 25
          +R H+RTHTGEKPYKC  C  + + 
Sbjct: 2  LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
KOG2462|consensus	279		99.87
KOG2462|consensus	279		99.85
KOG3623|consensus	1007		99.51
KOG3623|consensus	1007		99.47
KOG3576|consensus	267		99.43
KOG1074|consensus	958		99.42
KOG3576|consensus	267		99.36
PHA00733	128	hypothetical protein	99.32
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.31
PHA02768	55	hypothetical protein; Provisional	99.27
KOG3608|consensus	467		99.07
KOG1074|consensus	958		99.04
KOG3608|consensus	467		98.95
PHA00616	44	hypothetical protein	98.75
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
PHA00732	79	hypothetical protein	98.69
PHA00616	44	hypothetical protein	98.67
PHA02768	55	hypothetical protein; Provisional	98.64
PLN03086	567	PRLI-interacting factor K; Provisional	98.62
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.45
PLN03086	567	PRLI-interacting factor K; Provisional	98.45
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.41
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.41
KOG3993|consensus	500		98.35
PHA00733	128	hypothetical protein	98.27
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.21
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.09
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.97
KOG3993|consensus	500		97.96
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.77
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.72
smart00355	26	ZnF_C2H2 zinc finger.	97.64
smart00355	26	ZnF_C2H2 zinc finger.	97.61
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.59
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.42
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.42
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.38
PRK04860	160	hypothetical protein; Provisional	97.32
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.22
PRK04860	160	hypothetical protein; Provisional	96.84
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.69
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.44
COG4049	65	Uncharacterized protein containing archaeal-type C	96.41
PHA00732	79	hypothetical protein	96.4
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	96.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.87
KOG2186|consensus	276		95.59
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	95.25
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	95.19
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.0
COG5048	467	FOG: Zn-finger [General function prediction only]	94.69
COG4049	65	Uncharacterized protein containing archaeal-type C	94.58
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	94.53
KOG2893|consensus	341		94.2
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.79
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	92.41
KOG1146|consensus	1406		92.28
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	92.15
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	91.95
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	91.61
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	91.43
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	91.27
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	91.17
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	91.15
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	91.12
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	91.12
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	91.01
PF14353	128	CpXC: CpXC protein	90.98
smart00531	147	TFIIE Transcription initiation factor IIE.	90.96
PF15269	54	zf-C2H2_7: Zinc-finger	90.95
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	90.73
cd00924	97	Cyt_c_Oxidase_Vb Cytochrome c oxidase subunit Vb.	90.05
smart00440	40	ZnF_C2C2 C2C2 Zinc finger. Nucleic-acid-binding mo	89.77
COG5048	467	FOG: Zn-finger [General function prediction only]	89.18
PRK06266	178	transcription initiation factor E subunit alpha; V	88.48
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.11
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	87.68
COG1571	421	Predicted DNA-binding protein containing a Zn-ribb	87.04
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	86.52
PLN02294	174	cytochrome c oxidase subunit Vb	86.03
TIGR01206	54	lysW lysine biosynthesis protein LysW. This very s	85.72
KOG4167|consensus	907		85.63
KOG2593|consensus	436		85.04
PRK09678	72	DNA-binding transcriptional regulator; Provisional	84.44
COG2331	82	Uncharacterized protein conserved in bacteria [Fun	84.0
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	83.93
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.58
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	82.94
KOG4173|consensus	253		82.89
PF01096	39	TFIIS_C: Transcription factor S-II (TFIIS); InterP	82.77
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	82.75
PF01780	90	Ribosomal_L37ae: Ribosomal L37ae protein family; I	82.62
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	82.44
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	82.28
PRK03824	135	hypA hydrogenase nickel incorporation protein; Pro	82.28
PF11672	102	DUF3268: Protein of unknown function (DUF3268); In	80.98
KOG3408|consensus	129		80.72
PF08274	30	PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR01	80.71
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	80.48

>KOG2462|consensus

Probab=99.87  E-value=6.3e-23  Score=112.71  Aligned_cols=72  Identities=26%  Similarity=0.483  Sum_probs=64.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhHH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQ   74 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   74 (84)
                      |+.|+|+|+  -++.|.+||+.|.++.-|+.|+++|+|++ |.|..|++.|.+.++|..||++|.+.+.|.|..+
T Consensus       177 LkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C  249 (279)
T KOG2462|consen  177 LKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRC  249 (279)
T ss_pred             HhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcch
Confidence            567888887  57999999999999999999999999988 9999999999999999999999999999988443

>KOG2462|consensus

Probab=99.85  E-value=2.7e-22  Score=110.27  Aligned_cols=62  Identities=40%  Similarity=0.779  Sum_probs=59.4

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |+.|+|+|||||||.|+.|++.|.+.++|..|+++|.+.+ |+|..|++.|...+.|.+|...
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            6789999999999999999999999999999999999988 9999999999999999999764

>KOG3623|consensus

Probab=99.51  E-value=4.1e-15  Score=91.16  Aligned_cols=65  Identities=15%  Similarity=0.225  Sum_probs=52.4

Q ss_pred             CCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhHH
Q psy10072         10 GEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQ   74 (84)
Q Consensus        10 ~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   74 (84)
                      .+.+|.|..|++.|.-.+.|.+|.--|+|.+ |+|..|.++|.....|+.|.+.|.||+||+|..+
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKC  956 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKC  956 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhh
Confidence            3457888888888888888888888888877 8888888888888888888888888888888655

>KOG3623|consensus

Probab=99.47  E-value=1.2e-14  Score=89.16  Aligned_cols=71  Identities=21%  Similarity=0.492  Sum_probs=61.1

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhh-hCCCCChhh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER-RHMPGDVLG   71 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~-~~~~~~~~~   71 (84)
                      |.+|.=-|+|.+||.|.+|.+.|..+..|.-|.+.|.|.+ |+|..|++.|...+++..||.- -.-=+||..
T Consensus       910 LaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMNHRYSYCKpyrE  982 (1007)
T KOG3623|consen  910 LARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMNHRYSYCKPYRE  982 (1007)
T ss_pred             HHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhccchhcccchhh
Confidence            4567778999999999999999999999999999999999 9999999999999999999863 233344443

>KOG3576|consensus

Probab=99.43  E-value=1.3e-14  Score=77.74  Aligned_cols=60  Identities=25%  Similarity=0.535  Sum_probs=31.3

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHh
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      .+|++-|...+.+.|..||+.|...-+|.+|+++|+|.. |+|..|++.|.+.-+|..|.+
T Consensus       134 nrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  134 NRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             HHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            344555555555555555555555555555555555544 555555555555555555544

>KOG1074|consensus

Probab=99.42  E-value=2.4e-14  Score=88.63  Aligned_cols=64  Identities=31%  Similarity=0.652  Sum_probs=58.4

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-----eeCC---CCccccccchHHHHHHhhhC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-----VKCP---HCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-----~~c~---~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |+.|.|+|+|++||+|++|++.|.++.+|..|+..|...+     +.|+   .|.+.|...-.|..|++.|.
T Consensus       621 LqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  621 LQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHL  692 (958)
T ss_pred             hhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeec
Confidence            6789999999999999999999999999999999887543     7899   89999999999999999987

>KOG3576|consensus

Probab=99.36  E-value=1.7e-13  Score=73.46  Aligned_cols=65  Identities=18%  Similarity=0.341  Sum_probs=60.2

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhHHH
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQ   75 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~   75 (84)
                      ...+.|.+|++.|....-|.+|++-|...+ +-|..||+.|.+.-.|++|.++|++..||.|..+.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~  180 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCE  180 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhh
Confidence            346899999999999999999999999988 99999999999999999999999999999996654

>PHA00733 hypothetical protein

Probab=99.32  E-value=3.4e-12  Score=64.84  Aligned_cols=61  Identities=20%  Similarity=0.494  Sum_probs=51.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      +|+..+ +.+||.|+.|++.|.....|..|++.+. .++.|..|++.|.....|..|+...+.
T Consensus        64 ~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h~-~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         64 KLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYTE-HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             hhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcCC-cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            444444 4789999999999999999999998662 239999999999999999999887654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.31  E-value=6.2e-13  Score=49.99  Aligned_cols=25  Identities=56%  Similarity=1.182  Sum_probs=22.4

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAH   25 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~   25 (84)
                      |.+||++|+|++||.|+.|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5789999999999999999998863

...

>PHA02768 hypothetical protein; Provisional

Probab=99.27  E-value=1.5e-12  Score=56.43  Aligned_cols=44  Identities=23%  Similarity=0.452  Sum_probs=39.0

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHH
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLN   57 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~   57 (84)
                      -|.|++||+.|...+.|..|++.|. .+++|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccceeE
Confidence            3799999999999999999999998 3489999999999877664

>KOG3608|consensus

Probab=99.07  E-value=9.8e-11  Score=67.49  Aligned_cols=83  Identities=24%  Similarity=0.546  Sum_probs=57.5

Q ss_pred             Chhhhh-hhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCC--CccccccchHHHHHHhhhC-CCC--ChhhhH-
Q psy10072          1 MRNHIR-THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPH--CAYKCVKQKDLNTHIERRH-MPG--DVLGHI-   73 (84)
Q Consensus         1 l~~h~~-~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~--C~~~f~~~~~l~~H~~~~~-~~~--~~~~~~-   73 (84)
                      |..|++ .|...|||.|..|+..+.+.+.|.+|...|....|+|..  |...+++...+.+|+..++ +..  +|.|.. 
T Consensus       279 L~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~C  358 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCC  358 (467)
T ss_pred             HHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecc
Confidence            356777 477778888888888888888888888877744488866  8888888778888877654 333  456633 


Q ss_pred             HHHHHhccCC
Q psy10072         74 QQMLEIGHNM   83 (84)
Q Consensus        74 ~~~~~~~~~~   83 (84)
                      +..+..|.++
T Consensus       359 dr~ft~G~~L  368 (467)
T KOG3608|consen  359 DRFFTSGKSL  368 (467)
T ss_pred             hhhhccchhH
Confidence            3455555543

>KOG1074|consensus

Probab=99.04  E-value=5.2e-11  Score=74.36  Aligned_cols=59  Identities=19%  Similarity=0.339  Sum_probs=54.9

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      ..|..|++.|...+.|..|+++|++.+ |.|..|++.|....+|+.||.+|.+..|..-.
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            689999999999999999999999999 99999999999999999999999888776543

>KOG3608|consensus

Probab=98.95  E-value=7.1e-10  Score=64.04  Aligned_cols=70  Identities=29%  Similarity=0.648  Sum_probs=57.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHh-cCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRI-HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~-~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |+.|++.|..-  |.|+.|+.+....+.|..|++. |...+ |+|+.|++.|...+.|.+|..+|. +..|.|..
T Consensus       253 L~~Hv~rHvn~--ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h  324 (467)
T KOG3608|consen  253 LKSHVVRHVNC--YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEH  324 (467)
T ss_pred             HHHHHHHhhhc--ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCC
Confidence            45677777554  8999999999999999999986 66666 999999999999999999998877 56676643

>PHA00616 hypothetical protein

Probab=98.75  E-value=3.1e-09  Score=44.17  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=16.1

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCChh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDVL   70 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~   70 (84)
                      |+|+.||+.|.+.+.+..|++.+++++++.
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            345555555555555555555555555543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=1.6e-08  Score=37.82  Aligned_cols=24  Identities=33%  Similarity=0.665  Sum_probs=21.3

Q ss_pred             hHHHHHHhcCCce-eeCCCCccccc
Q psy10072         28 TMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        28 ~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      +|..|++.|++.+ |.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4788999999988 99999999886

...

>PHA00732 hypothetical protein

Probab=98.69  E-value=2.7e-08  Score=46.69  Aligned_cols=46  Identities=33%  Similarity=0.612  Sum_probs=38.3

Q ss_pred             CeecCCCCccccChhhHHHHHHh-cCCceeeCCCCccccccchHHHHHHhhh
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRI-HQDLKVKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~-~~~~~~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      ||.|..|++.|.....|..|++. |.+  +.|..|++.|.   .+..|....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--CccCCCCCEeC---Chhhhhccc
Confidence            68899999999999999999984 554  58999999998   467887553

>PHA00616 hypothetical protein

Probab=98.67  E-value=7.4e-09  Score=43.04  Aligned_cols=33  Identities=15%  Similarity=0.158  Sum_probs=29.3

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      ||.|..||+.|...+.+..|++.+++.+ +.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999998877 77653

>PHA02768 hypothetical protein; Provisional

Probab=98.64  E-value=2e-08  Score=43.71  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=25.5

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |.|+.||+.|.+.++|..|++.|+  +++.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc   34 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKL   34 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccC
Confidence            899999999999999999999998  34444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.62  E-value=5.4e-08  Score=59.70  Aligned_cols=57  Identities=14%  Similarity=0.332  Sum_probs=23.8

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      +.+.|+.|++.|. ...+..|+..+. .++.|+ |+..+ ....|..|+..+.+++++.|.
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H-kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~  508 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH-EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCR  508 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC-CCccCC-CCCCc-chhHHHhhhhccCCCCceeCC
Confidence            3344444444443 233444444432 224444 44322 234444444444444444443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.45  E-value=5.4e-07  Score=39.36  Aligned_cols=49  Identities=27%  Similarity=0.616  Sum_probs=37.4

Q ss_pred             CeecCCCCccccChhhHHHHHHh-cCCc-e-eeCCCCccccccchHHHHHHhhhC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRI-HQDL-K-VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~-~~~~-~-~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      .|.|+.|++. .....|..|... |... + +.|+.|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4789999994 556789999764 6554 3 89999997644  48999988765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.45  E-value=1.9e-07  Score=57.41  Aligned_cols=69  Identities=16%  Similarity=0.319  Sum_probs=55.4

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCcccccc----------chHHHHHHhhhCCCCCh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVK----------QKDLNTHIERRHMPGDV   69 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~----------~~~l~~H~~~~~~~~~~   69 (84)
                      |..|+.+++  +++.|+ |++.+ ....|..|+..+.+.+ +.|..|++.+..          ...|..|.... +.+++
T Consensus       468 LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~  542 (567)
T PLN03086        468 MEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTA  542 (567)
T ss_pred             HHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcce
Confidence            357888874  789999 99765 5678999998888877 999999998842          34789998774 88899


Q ss_pred             hhhHH
Q psy10072         70 LGHIQ   74 (84)
Q Consensus        70 ~~~~~   74 (84)
                      .|..+
T Consensus       543 ~C~~C  547 (567)
T PLN03086        543 PCDSC  547 (567)
T ss_pred             Ecccc
Confidence            98655

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.41  E-value=2.2e-07  Score=33.54  Aligned_cols=20  Identities=30%  Similarity=0.762  Sum_probs=9.7

Q ss_pred             eCCCCccccccchHHHHHHh
Q psy10072         42 KCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        42 ~c~~C~~~f~~~~~l~~H~~   61 (84)
                      .|+.|++.|.....|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            44444444444444444444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.41  E-value=2.1e-07  Score=33.59  Aligned_cols=23  Identities=35%  Similarity=0.743  Sum_probs=21.0

Q ss_pred             eecCCCCccccChhhHHHHHHhc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=98.35  E-value=1.7e-07  Score=55.53  Aligned_cols=52  Identities=23%  Similarity=0.431  Sum_probs=44.6

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCC---------------------------------ce-eeCCCCccccccchHHHH
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQD---------------------------------LK-VKCPHCAYKCVKQKDLNT   58 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~---------------------------------~~-~~c~~C~~~f~~~~~l~~   58 (84)
                      -|+|++|++.|.-+.+|.-|.++|..                                 .. |.|..|++.|++...|+.
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            48999999999999999999988731                                 12 789999999999999999


Q ss_pred             HHhhhC
Q psy10072         59 HIERRH   64 (84)
Q Consensus        59 H~~~~~   64 (84)
                      |+.+|+
T Consensus       375 Hqlthq  380 (500)
T KOG3993|consen  375 HQLTHQ  380 (500)
T ss_pred             hHHhhh
Confidence            987765

>PHA00733 hypothetical protein

Probab=98.27  E-value=1.7e-07  Score=47.82  Aligned_cols=60  Identities=13%  Similarity=0.119  Sum_probs=44.1

Q ss_pred             CCCeecCCCCccccChhhHHHH------HHhcCCceeeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYH------LRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h------~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      .+++.|.+|...|..+..|..+      +..+...+|.|..|++.|.....|..|+..+  +.++.|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            5678899999888877665554      2223333399999999999999999999865  2345553

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.21  E-value=1.6e-06  Score=31.27  Aligned_cols=23  Identities=22%  Similarity=0.634  Sum_probs=11.7

Q ss_pred             eeCCCCccccccchHHHHHHhhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      |.|+.|++.|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45555555555555555555543

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.09  E-value=2.7e-06  Score=31.78  Aligned_cols=24  Identities=33%  Similarity=0.592  Sum_probs=12.5

Q ss_pred             CeecCCCCccccChhhHHHHHHhc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      ||.|..|++.|.....|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            345555555555555555555443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.00  E-value=7.6e-06  Score=29.39  Aligned_cols=23  Identities=26%  Similarity=0.670  Sum_probs=19.1

Q ss_pred             eecCCCCccccChhhHHHHHHhc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      |.|+.|++.|.....+..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999865

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.97  E-value=6.5e-06  Score=30.73  Aligned_cols=25  Identities=16%  Similarity=0.337  Sum_probs=22.5

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|..|++.|.....|..|++.|..
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            7899999999999999999987653

>KOG3993|consensus

Probab=97.96  E-value=1.2e-06  Score=52.04  Aligned_cols=52  Identities=17%  Similarity=0.314  Sum_probs=45.5

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|..|...|.+.-.|.+|.-...... |+|++|+++|.-..+|..|++.|..
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKP  320 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKP  320 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCC
Confidence            889999999999999998876555544 9999999999999999999998864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.77  E-value=3.5e-05  Score=32.94  Aligned_cols=29  Identities=28%  Similarity=0.568  Sum_probs=20.9

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      ..|+.|+..+++..+|.+|+...+..+|.
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             CCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            78999999999999999999888877763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.72  E-value=1.5e-05  Score=46.11  Aligned_cols=51  Identities=27%  Similarity=0.574  Sum_probs=41.3

Q ss_pred             CCCeecCC--CCccccChhhHHHHHHh-c---------C---------Cce-eeCCCCccccccchHHHHHHh
Q psy10072         11 EKPYKCTF--CPFTAAHSSTMSYHLRI-H---------Q---------DLK-VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        11 ~k~~~c~~--C~~~f~~~~~l~~h~~~-~---------~---------~~~-~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      +|||.|++  |.+.|...-.|.-|+.. |         .         ..+ |.|++|++.|.....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            59999986  99999999899888763 3         0         114 899999999999988988853

>smart00355 ZnF_C2H2 zinc finger

Probab=97.64  E-value=5e-05  Score=27.52  Aligned_cols=20  Identities=25%  Similarity=0.715  Sum_probs=10.0

Q ss_pred             eCCCCccccccchHHHHHHh
Q psy10072         42 KCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        42 ~c~~C~~~f~~~~~l~~H~~   61 (84)
                      .|..|++.|.....+..|+.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            34455555555555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=97.61  E-value=7e-05  Score=27.11  Aligned_cols=24  Identities=29%  Similarity=0.610  Sum_probs=21.1

Q ss_pred             eecCCCCccccChhhHHHHHHhcC
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      +.|..|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999988654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.59  E-value=6.2e-05  Score=36.36  Aligned_cols=23  Identities=22%  Similarity=0.647  Sum_probs=20.4

Q ss_pred             eeCCCCccccccchHHHHHHhhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      +.|..|++.|.....|..|++.+
T Consensus        51 ~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   51 FRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             EEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCccCCCCcCHHHHHHHHcCc
Confidence            78999999999999999999964

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.42  E-value=0.00021  Score=30.62  Aligned_cols=30  Identities=27%  Similarity=0.512  Sum_probs=21.0

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHHhcCC
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ..+.|..|++|+..+....+|.+|+....+
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            456799999999999999999999976544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.42  E-value=0.00015  Score=26.20  Aligned_cols=23  Identities=43%  Similarity=1.099  Sum_probs=13.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |+|..|+.... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776665 667777766643

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.38  E-value=0.00013  Score=26.51  Aligned_cols=21  Identities=24%  Similarity=0.653  Sum_probs=10.8

Q ss_pred             eecCCCCccccChhhHHHHHH
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      |.|..|++.|.....+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555544

>PRK04860 hypothetical protein; Provisional

Probab=97.32  E-value=0.00027  Score=37.52  Aligned_cols=35  Identities=31%  Similarity=0.710  Sum_probs=19.6

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      +|.|. |+.   ....+..|.+.+.+.+ |.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            45565 654   3444556666666555 66666665554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.22  E-value=0.00029  Score=25.59  Aligned_cols=23  Identities=17%  Similarity=0.481  Sum_probs=20.5

Q ss_pred             eeCCCCccccccchHHHHHHhhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      |.|..|.+.|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998753

>PRK04860 hypothetical protein; Provisional

Probab=96.84  E-value=0.00063  Score=36.12  Aligned_cols=25  Identities=36%  Similarity=0.596  Sum_probs=22.4

Q ss_pred             hhhhhhhcCCCCeecCCCCccccCh
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHS   26 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~   26 (84)
                      ++|.++|+++++|.|..|+..|...
T Consensus       132 rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        132 RRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             HHHHHHhcCCccEECCCCCceeEEe
Confidence            6899999999999999999988654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.69  E-value=0.00051  Score=25.51  Aligned_cols=21  Identities=19%  Similarity=0.496  Sum_probs=12.6

Q ss_pred             eeCCCCccccccchHHHHHHh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      |.|..|++.|.....+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            446666666666666665554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.44  E-value=0.0033  Score=22.98  Aligned_cols=20  Identities=15%  Similarity=0.403  Sum_probs=12.5

Q ss_pred             eecCCCCccccChhhHHHHHH
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      ..|+.|++.| ....|.+|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3577777777 4445666654

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=96.41  E-value=0.0019  Score=28.15  Aligned_cols=29  Identities=24%  Similarity=0.628  Sum_probs=21.8

Q ss_pred             CCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072         37 QDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        37 ~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      .|+. +.|+-|+..|+....+.+|....++
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3555 7888888888888888888776543

>PHA00732 hypothetical protein

Probab=96.40  E-value=0.0031  Score=29.68  Aligned_cols=25  Identities=32%  Similarity=0.712  Sum_probs=21.9

Q ss_pred             eeCCCCccccccchHHHHHHhh-hCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER-RHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~-~~~   65 (84)
                      |.|..|++.|.+...|..|++. |.+
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~   27 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL   27 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC
Confidence            6899999999999999999984 554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=96.31  E-value=0.0045  Score=24.15  Aligned_cols=22  Identities=23%  Similarity=0.593  Sum_probs=16.5

Q ss_pred             CeecCCCCccccChhhHHHHHH
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4778888888887777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.87  E-value=0.0072  Score=26.22  Aligned_cols=34  Identities=26%  Similarity=0.467  Sum_probs=24.2

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC-C-CChhhhHHH
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM-P-GDVLGHIQQ   75 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~-~-~~~~~~~~~   75 (84)
                      |.|+.|++. .+...|..|....+. + +.+.|.++.
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~   38 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICS   38 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCch
Confidence            789999995 556789999886543 2 356665554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2186|consensus

Probab=95.59  E-value=0.0098  Score=33.80  Aligned_cols=50  Identities=12%  Similarity=0.321  Sum_probs=38.4

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      .|.|..||....-+ .+.+|+....+..|.|.-|+..|.. ..+..|...-+
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc-chhhhhhhhcc
Confidence            37899999876654 5788988777755999999999998 55777765433

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=95.25  E-value=0.029  Score=22.45  Aligned_cols=34  Identities=21%  Similarity=0.357  Sum_probs=23.7

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ..|+.|+..|.....    .....+.+.+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~----~l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDD----KLPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHH----HcccCCcEEECCCCCcEee
Confidence            479999998877653    1223344589999998774

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=95.19  E-value=0.034  Score=22.14  Aligned_cols=33  Identities=18%  Similarity=0.343  Sum_probs=23.2

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCcccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKC   50 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f   50 (84)
                      ..|+.|+..|.-...    +....+.+.+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~----~ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDE----KIPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHH----HCCCCCcEEECCCCCCEe
Confidence            479999988877654    222334458999998876

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.00  E-value=0.033  Score=26.69  Aligned_cols=24  Identities=21%  Similarity=0.623  Sum_probs=21.2

Q ss_pred             CeecCCCCccccChhhHHHHHHhc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      .+.|..|++.|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            589999999999999999999864

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.69  E-value=0.0086  Score=35.60  Aligned_cols=60  Identities=27%  Similarity=0.409  Sum_probs=48.9

Q ss_pred             CCeecCCCCccccChhhHHHHHH--hcCCc--e-eeCC--CCccccccchHHHHHHhhhCCCCChhh
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLR--IHQDL--K-VKCP--HCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~--~~~~~--~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      .++.|..|...|.....+..|.+  .|.+.  + +.|+  .|++.|.+...+..|...+....+..+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            36788889999999888888888  78877  6 8888  799999999888888888777665544

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.58  E-value=0.016  Score=25.35  Aligned_cols=30  Identities=17%  Similarity=0.332  Sum_probs=25.3

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      ...|+.-+.|+.|+..|....+...|+...
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            456788899999999999999999998643

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=94.53  E-value=0.053  Score=21.60  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=22.5

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ..|+.|+..|......    ....+....|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~----~~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQ----LGANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHH----cCCCCCEEECCCCCCEEE
Confidence            5799999888666432    112223489999998764

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2893|consensus

Probab=94.20  E-value=0.011  Score=33.44  Aligned_cols=46  Identities=24%  Similarity=0.507  Sum_probs=34.4

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHH
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI   60 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~   60 (84)
                      .||| |=.|++.|.....|.+|++   .+-|+|-.|.+....-..|..|-
T Consensus         9 ~kpw-cwycnrefddekiliqhqk---akhfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQK---AKHFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhh---hccceeeeehhhhccCCCceeeh
Confidence            4565 6789999999999988876   33399999987665555566663

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.11  E-value=0.041  Score=21.38  Aligned_cols=24  Identities=25%  Similarity=0.688  Sum_probs=15.8

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      |.|..||..+....           .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~-----------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE-----------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc-----------CCCcCcCCCC
Confidence            67888886654332           2378888875

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.79  E-value=0.017  Score=34.10  Aligned_cols=26  Identities=27%  Similarity=0.715  Sum_probs=21.0

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHH
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      ...|||+|++|++.|.....|.-|..
T Consensus       394 ~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         394 AKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ccCCceeccccchhhccCccceeccc
Confidence            34599999999999998877776643

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=92.41  E-value=0.037  Score=30.88  Aligned_cols=43  Identities=23%  Similarity=0.542  Sum_probs=27.7

Q ss_pred             CCCeecCCCCccccChhhHHHHHHh---c-------CC-ce-----eeCCCCccccccc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRI---H-------QD-LK-----VKCPHCAYKCVKQ   53 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~---~-------~~-~~-----~~c~~C~~~f~~~   53 (84)
                      ++...|++|+..|....-.....+.   .       .+ .+     ..|+.||.++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            3567999999999877544433321   1       11 12     4899999877643

>KOG1146|consensus

Probab=92.28  E-value=0.093  Score=36.38  Aligned_cols=55  Identities=25%  Similarity=0.526  Sum_probs=44.5

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHHh-c-------------------------CCceeeCCCCccccccchHHHHHHh
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLRI-H-------------------------QDLKVKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~~-~-------------------------~~~~~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      +.-.+.+.|+.|+..|.....|..|++. |                         .+.+|.|..|...+....+|.+|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            4445789999999999999999999987 1                         0122788999999999999999987


Q ss_pred             h
Q psy10072         62 R   62 (84)
Q Consensus        62 ~   62 (84)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            5

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=92.15  E-value=0.14  Score=18.89  Aligned_cols=11  Identities=45%  Similarity=1.141  Sum_probs=7.3

Q ss_pred             eeCCCCccccc
Q psy10072         41 VKCPHCAYKCV   51 (84)
Q Consensus        41 ~~c~~C~~~f~   51 (84)
                      -.|+.||..|.
T Consensus        15 ~~Cp~CG~~F~   25 (26)
T PF10571_consen   15 KFCPHCGYDFE   25 (26)
T ss_pred             CcCCCCCCCCc
Confidence            36777777664

Several members are annotated as putative helicases.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=91.95  E-value=0.052  Score=21.87  Aligned_cols=30  Identities=27%  Similarity=0.615  Sum_probs=19.1

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYK   49 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~   49 (84)
                      |.|..||..|......      ..+....|+.|+..
T Consensus         6 y~C~~Cg~~fe~~~~~------~~~~~~~CP~Cg~~   35 (41)
T smart00834        6 YRCEDCGHTFEVLQKI------SDDPLATCPECGGD   35 (41)
T ss_pred             EEcCCCCCEEEEEEec------CCCCCCCCCCCCCc
Confidence            7899999887654332      11223678888863

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=91.61  E-value=0.19  Score=25.15  Aligned_cols=30  Identities=17%  Similarity=0.404  Sum_probs=21.7

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQ   53 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~   53 (84)
                      ..|+.||..|....          ..+..|+.||..|...
T Consensus        10 R~Cp~CG~kFYDLn----------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDLN----------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccCC----------CCCccCCCCCCccCcc
Confidence            38999998886531          2336899999888755

The function of members of this family is unknown.

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=91.43  E-value=0.15  Score=28.61  Aligned_cols=27  Identities=15%  Similarity=0.326  Sum_probs=20.7

Q ss_pred             CCCCeecCCCCccccChhhHHHHHHhc
Q psy10072         10 GEKPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        10 ~~k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      .+..|.|+.|+|.|.-...+.+|+...
T Consensus        74 ~~~K~~C~lc~KlFkg~eFV~KHI~nK  100 (214)
T PF04959_consen   74 DEDKWRCPLCGKLFKGPEFVRKHIFNK  100 (214)
T ss_dssp             SSEEEEE-SSS-EESSHHHHHHHHHHH
T ss_pred             cCCEECCCCCCcccCChHHHHHHHhhc
Confidence            445699999999999999999998763

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=91.27  E-value=0.17  Score=26.93  Aligned_cols=35  Identities=20%  Similarity=0.373  Sum_probs=23.6

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ....-|.|+.|+..|+....+.        ..|.|+.||....
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~--------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME--------LNFTCPRCGAMLD  139 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH--------cCCcCCCCCCEee
Confidence            3445688999988876655442        1389999987543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=91.17  E-value=0.068  Score=28.39  Aligned_cols=12  Identities=17%  Similarity=0.542  Sum_probs=9.1

Q ss_pred             eeCCCCcccccc
Q psy10072         41 VKCPHCAYKCVK   52 (84)
Q Consensus        41 ~~c~~C~~~f~~   52 (84)
                      ++|+.|++.|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            788888887754

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=91.15  E-value=0.2  Score=24.00  Aligned_cols=30  Identities=30%  Similarity=0.485  Sum_probs=20.3

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      .+|.|+.|++. ..       .+  .+.. |.|..|+..|.
T Consensus        34 ~~~~Cp~C~~~-~V-------kR--~a~GIW~C~kCg~~fA   64 (89)
T COG1997          34 AKHVCPFCGRT-TV-------KR--IATGIWKCRKCGAKFA   64 (89)
T ss_pred             cCCcCCCCCCc-ce-------ee--eccCeEEcCCCCCeec
Confidence            46899999865 11       12  1233 99999998875

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=91.12  E-value=0.31  Score=20.31  Aligned_cols=26  Identities=27%  Similarity=0.586  Sum_probs=18.3

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      .|.|..||..|...          .+....|+.|+.
T Consensus         2 ~Y~C~~Cg~~~~~~----------~~~~irC~~CG~   27 (44)
T smart00659        2 IYICGECGRENEIK----------SKDVVRCRECGY   27 (44)
T ss_pred             EEECCCCCCEeecC----------CCCceECCCCCc
Confidence            37899999877543          223378999985

present in RNA polymerase I, II and III

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=91.12  E-value=0.36  Score=21.49  Aligned_cols=11  Identities=18%  Similarity=0.558  Sum_probs=5.8

Q ss_pred             CeecCCCCccc
Q psy10072         13 PYKCTFCPFTA   23 (84)
Q Consensus        13 ~~~c~~C~~~f   23 (84)
                      .|.|+.||..-
T Consensus        27 ~F~CPnCGe~~   37 (61)
T COG2888          27 KFPCPNCGEVE   37 (61)
T ss_pred             EeeCCCCCcee
Confidence            35566665443

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=91.01  E-value=0.073  Score=22.73  Aligned_cols=29  Identities=31%  Similarity=0.675  Sum_probs=18.7

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      |.|..|+..|......      .......|+.|+.
T Consensus         6 y~C~~Cg~~fe~~~~~------~~~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKM------SDDPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEec------CCCCCCCCCCCCC
Confidence            7899999888754321      1122267888885

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PF14353 CpXC: CpXC protein

Probab=90.98  E-value=0.47  Score=24.21  Aligned_cols=43  Identities=21%  Similarity=0.380  Sum_probs=25.4

Q ss_pred             ecCCCCccccChh----------hHHHHHHhcCCce--eeCCCCccccccchHHHHH
Q psy10072         15 KCTFCPFTAAHSS----------TMSYHLRIHQDLK--VKCPHCAYKCVKQKDLNTH   59 (84)
Q Consensus        15 ~c~~C~~~f~~~~----------~l~~h~~~~~~~~--~~c~~C~~~f~~~~~l~~H   59 (84)
                      .|+.|+..|...-          .+..-  .-.|.-  +.|+.||..|.-...+.-|
T Consensus         3 tCP~C~~~~~~~v~~~I~~~~~p~l~e~--il~g~l~~~~CP~Cg~~~~~~~p~lY~   57 (128)
T PF14353_consen    3 TCPHCGHEFEFEVWTSINADEDPELKEK--ILDGSLFSFTCPSCGHKFRLEYPLLYH   57 (128)
T ss_pred             CCCCCCCeeEEEEEeEEcCcCCHHHHHH--HHcCCcCEEECCCCCCceecCCCEEEE
Confidence            6888887765331          12211  223433  8999999888755554444

>smart00531 TFIIE Transcription initiation factor IIE

Probab=90.96  E-value=0.31  Score=25.61  Aligned_cols=39  Identities=21%  Similarity=0.433  Sum_probs=24.5

Q ss_pred             CCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         10 GEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        10 ~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ...-|.|+.|+..|.....+..   ......|.|+.|+....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~---~d~~~~f~Cp~Cg~~l~  134 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL---LDMDGTFTCPRCGEELE  134 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh---cCCCCcEECCCCCCEEE
Confidence            3456899999988875432211   12222299999997554

>PF15269 zf-C2H2_7: Zinc-finger

Probab=90.95  E-value=0.21  Score=20.87  Aligned_cols=25  Identities=24%  Similarity=0.630  Sum_probs=20.1

Q ss_pred             Cce--eeCCCCccccccchHHHHHHhh
Q psy10072         38 DLK--VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        38 ~~~--~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |++  |+|-+|.......+.|..||..
T Consensus        16 gkp~~ykcfqcpftc~~kshl~nhmky   42 (54)
T PF15269_consen   16 GKPFKYKCFQCPFTCNEKSHLFNHMKY   42 (54)
T ss_pred             CCCccceeecCCcccchHHHHHHHHHH
Confidence            455  7899998888888888888865

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=90.73  E-value=0.28  Score=20.41  Aligned_cols=30  Identities=30%  Similarity=0.743  Sum_probs=20.1

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      .|.|+.||..|.....         ...+.|+.|+..+.
T Consensus         3 ~y~C~~CG~~~~~~~~---------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDEY---------GTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECCC---------CCceECCCCCCeEE
Confidence            5889999987755332         11379999986443

>cd00924 Cyt_c_Oxidase_Vb Cytochrome c oxidase subunit Vb

Probab=90.05  E-value=0.11  Score=25.42  Aligned_cols=20  Identities=25%  Similarity=0.517  Sum_probs=14.5

Q ss_pred             hhhhcCCCCeecCCCCccccC
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAH   25 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~   25 (84)
                      +..+.| +|.+|.+||..|..
T Consensus        72 ~~l~~g-~~~rC~eCG~~fkL   91 (97)
T cd00924          72 MWLEKG-KPKRCPECGHVFKL   91 (97)
T ss_pred             EEEeCC-CceeCCCCCcEEEE
Confidence            445566 68889889888754

Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit Vb is one of three mammalian subunits that lacks a transmembrane region. Subunit Vb is located on the matrix side of the membrane and binds the regulatory subunit of protein kinase A. The abnormally extended conformation is stable only in the CcO assembly.

>smart00440 ZnF_C2C2 C2C2 Zinc finger

Probab=89.77  E-value=0.08  Score=21.56  Aligned_cols=35  Identities=17%  Similarity=0.322  Sum_probs=18.6

Q ss_pred             ecCCCCccccChhhHHHHHHh-cCC-ce-eeCCCCccccc
Q psy10072         15 KCTFCPFTAAHSSTMSYHLRI-HQD-LK-VKCPHCAYKCV   51 (84)
Q Consensus        15 ~c~~C~~~f~~~~~l~~h~~~-~~~-~~-~~c~~C~~~f~   51 (84)
                      .|+.|+..-.....+  .++. ..+ .. |.|..|+..+.
T Consensus         2 ~Cp~C~~~~a~~~q~--Q~RsaDE~mT~fy~C~~C~~~w~   39 (40)
T smart00440        2 PCPKCGNREATFFQL--QTRSADEPMTVFYVCTKCGHRWR   39 (40)
T ss_pred             cCCCCCCCeEEEEEE--cccCCCCCCeEEEEeCCCCCEeC
Confidence            578887543222222  2232 222 23 79999987654

Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.18  E-value=0.13  Score=30.67  Aligned_cols=43  Identities=28%  Similarity=0.706  Sum_probs=36.1

Q ss_pred             Chhhhh--hhcCC--CCeecC--CCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          1 MRNHIR--THTGE--KPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         1 l~~h~~--~h~~~--k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      |..|.+  .|+++  +|+.|+  .|++.|.+...+..|...+.+.. +.+
T Consensus       305 l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         305 LTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             ccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            356777  79999  999999  79999999999999988888766 444

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=88.48  E-value=0.34  Score=26.40  Aligned_cols=34  Identities=18%  Similarity=0.472  Sum_probs=23.1

Q ss_pred             CCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         10 GEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        10 ~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ...-|.|+.|+..|+....+.        ..|.|+.||....
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~--------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME--------YGFRCPQCGEMLE  147 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh--------cCCcCCCCCCCCe
Confidence            345688999998876654321        1389999987543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.11  E-value=0.56  Score=23.25  Aligned_cols=25  Identities=32%  Similarity=0.801  Sum_probs=22.0

Q ss_pred             eeC----CCCccccccchHHHHHHhhhCC
Q psy10072         41 VKC----PHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c----~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|    ..|+........+..|.+.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            789    9999999999999999987664

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00614 ZnF_BED BED zinc finger

Probab=87.68  E-value=0.81  Score=19.36  Aligned_cols=21  Identities=29%  Similarity=0.653  Sum_probs=14.0

Q ss_pred             eeCCCCccccccc-----hHHHHHHh
Q psy10072         41 VKCPHCAYKCVKQ-----KDLNTHIE   61 (84)
Q Consensus        41 ~~c~~C~~~f~~~-----~~l~~H~~   61 (84)
                      -.|..|++.+...     ++|.+|+.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            5777777766543     57777776

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>COG1571 Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only]

Probab=87.04  E-value=0.47  Score=29.32  Aligned_cols=29  Identities=14%  Similarity=0.382  Sum_probs=20.9

Q ss_pred             ecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccch
Q psy10072         15 KCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQK   54 (84)
Q Consensus        15 ~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~   54 (84)
                      .|+.||....+           .|.. |.|+.|+..+....
T Consensus       352 ~Cp~Cg~~m~S-----------~G~~g~rC~kCg~~~~~~~  381 (421)
T COG1571         352 VCPRCGGRMKS-----------AGRNGFRCKKCGTRARETL  381 (421)
T ss_pred             CCCccCCchhh-----------cCCCCcccccccccCCccc
Confidence            79999875332           2554 99999998877553

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=86.52  E-value=0.59  Score=18.27  Aligned_cols=25  Identities=24%  Similarity=0.681  Sum_probs=14.8

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      .|.|..||..+....           .+..|+.|+.
T Consensus         2 ~~~C~~CG~i~~g~~-----------~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGEE-----------APEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECCc-----------CCCcCcCCCC
Confidence            478888886543221           1157777765

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PLN02294 cytochrome c oxidase subunit Vb

Probab=86.03  E-value=0.28  Score=26.49  Aligned_cols=21  Identities=19%  Similarity=0.476  Sum_probs=13.4

Q ss_pred             hhhhcCCCCeecCCCCccccCh
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAHS   26 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~~   26 (84)
                      +..+.| +|.+|++||..|...
T Consensus       134 f~L~kG-kp~RCpeCG~~fkL~  154 (174)
T PLN02294        134 FWLEKG-KSFECPVCTQYFELE  154 (174)
T ss_pred             EEecCC-CceeCCCCCCEEEEE
Confidence            334444 577888888777543

>TIGR01206 lysW lysine biosynthesis protein LysW

Probab=85.72  E-value=0.72  Score=20.16  Aligned_cols=31  Identities=16%  Similarity=0.361  Sum_probs=21.5

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      +.|+.|+..+.....       ..+....|+.|+..+.
T Consensus         3 ~~CP~CG~~iev~~~-------~~GeiV~Cp~CGaele   33 (54)
T TIGR01206         3 FECPDCGAEIELENP-------ELGELVICDECGAELE   33 (54)
T ss_pred             cCCCCCCCEEecCCC-------ccCCEEeCCCCCCEEE
Confidence            689999987755432       1244489999997664

This very small, poorly characterized protein has been shown essential in Thermus thermophilus for an unusual pathway of Lys biosynthesis from aspartate by way of alpha-aminoadipate (AAA) rather than diaminopimelate. It is found also in Deinococcus radiodurans and Pyrococcus horikoshii, which appear to share the AAA pathway.

>KOG4167|consensus

Probab=85.63  E-value=0.17  Score=33.22  Aligned_cols=25  Identities=24%  Similarity=0.466  Sum_probs=22.5

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|..|++.|.-..++..||+.|.-
T Consensus       793 FpCreC~kvF~KiKSrNAHMK~Hr~  817 (907)
T KOG4167|consen  793 FPCRECGKVFFKIKSRNAHMKTHRQ  817 (907)
T ss_pred             eehHHHHHHHHHHhhhhHHHHHHHH
Confidence            8999999999999999999988753

>KOG2593|consensus

Probab=85.04  E-value=0.87  Score=28.23  Aligned_cols=37  Identities=16%  Similarity=0.402  Sum_probs=25.1

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCcc
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAY   48 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~   48 (84)
                      +...-|.|+.|.+.|.....++   ......- |.|..|+-
T Consensus       124 t~~~~Y~Cp~C~kkyt~Lea~~---L~~~~~~~F~C~~C~g  161 (436)
T KOG2593|consen  124 TNVAGYVCPNCQKKYTSLEALQ---LLDNETGEFHCENCGG  161 (436)
T ss_pred             cccccccCCccccchhhhHHHH---hhcccCceEEEecCCC
Confidence            4456799999999987755432   3333333 89998875

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=84.44  E-value=0.56  Score=21.75  Aligned_cols=39  Identities=13%  Similarity=0.435  Sum_probs=22.3

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCce-eeCC--CCccccccch
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP--HCAYKCVKQK   54 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~--~C~~~f~~~~   54 (84)
                      +.|+.|+..-....+....  ....+. ++|.  .|+..|....
T Consensus         2 m~CP~Cg~~a~irtSr~~s--~~~~~~Y~qC~N~eCg~tF~t~e   43 (72)
T PRK09678          2 FHCPLCQHAAHARTSRYIT--DTTKERYHQCQNVNCSATFITYE   43 (72)
T ss_pred             ccCCCCCCccEEEEChhcC--hhhheeeeecCCCCCCCEEEEEE
Confidence            5799998765333321111  112233 6897  8999887543

>COG2331 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=84.00  E-value=0.44  Score=22.29  Aligned_cols=31  Identities=23%  Similarity=0.485  Sum_probs=20.4

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      |.|..|+..|    .+.+++.   +.+ -.|+.|+..++
T Consensus        13 Y~c~~cg~~~----dvvq~~~---ddplt~ce~c~a~~k   44 (82)
T COG2331          13 YECTECGNRF----DVVQAMT---DDPLTTCEECGARLK   44 (82)
T ss_pred             EeecccchHH----HHHHhcc---cCccccChhhChHHH
Confidence            7899998765    3344433   555 68888876543

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=83.93  E-value=1.6  Score=17.80  Aligned_cols=21  Identities=24%  Similarity=0.512  Sum_probs=11.4

Q ss_pred             eeCCCCcccccc----chHHHHHHh
Q psy10072         41 VKCPHCAYKCVK----QKDLNTHIE   61 (84)
Q Consensus        41 ~~c~~C~~~f~~----~~~l~~H~~   61 (84)
                      ..|..|++.+..    .++|..|+.
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHHH
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            567777765543    456666663

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.58  E-value=1.2  Score=23.04  Aligned_cols=32  Identities=6%  Similarity=-0.065  Sum_probs=22.0

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchH
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKD   55 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~   55 (84)
                      ..|+.||+.|....          ..+..|+.||..|.....
T Consensus        10 r~Cp~cg~kFYDLn----------k~p~vcP~cg~~~~~~~~   41 (129)
T TIGR02300        10 RICPNTGSKFYDLN----------RRPAVSPYTGEQFPPEEA   41 (129)
T ss_pred             ccCCCcCccccccC----------CCCccCCCcCCccCcchh
Confidence            47999998885431          223789999988765533

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=82.94  E-value=1.4  Score=19.59  Aligned_cols=9  Identities=22%  Similarity=0.648  Sum_probs=4.2

Q ss_pred             eecCCCCcc
Q psy10072         14 YKCTFCPFT   22 (84)
Q Consensus        14 ~~c~~C~~~   22 (84)
                      |.|+.||..
T Consensus        26 F~CPnCG~~   34 (59)
T PRK14890         26 FLCPNCGEV   34 (59)
T ss_pred             eeCCCCCCe
Confidence            445555443

>KOG4173|consensus

Probab=82.89  E-value=0.29  Score=27.35  Aligned_cols=48  Identities=23%  Similarity=0.498  Sum_probs=35.7

Q ss_pred             ecCCCCccccChhhHHHHHHh-c---------CCce-eeCC--CCccccccchHHHHHHhh
Q psy10072         15 KCTFCPFTAAHSSTMSYHLRI-H---------QDLK-VKCP--HCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        15 ~c~~C~~~f~~~~~l~~h~~~-~---------~~~~-~~c~--~C~~~f~~~~~l~~H~~~   62 (84)
                      .|..|.+.|++..-|..|+.. |         .|.. |+|.  .|+..|........|+-.
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            788999999988888888753 2         2445 8884  488888887777777654

>PF01096 TFIIS_C: Transcription factor S-II (TFIIS); InterPro: IPR001222 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.77  E-value=0.05  Score=22.03  Aligned_cols=10  Identities=20%  Similarity=0.610  Sum_probs=8.0

Q ss_pred             eeCCCCcccc
Q psy10072         41 VKCPHCAYKC   50 (84)
Q Consensus        41 ~~c~~C~~~f   50 (84)
                      |.|..|+..+
T Consensus        29 y~C~~C~~~w   38 (39)
T PF01096_consen   29 YVCCNCGHRW   38 (39)
T ss_dssp             EEESSSTEEE
T ss_pred             EEeCCCCCee
Confidence            7898898765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a zinc finger motif found in transcription factor IIs (TFIIS). In eukaryotes the initiation of transcription of protein encoding genes by polymerase II (Pol II) is modulated by general and specific transcription factors. The general transcription factors operate through common promoters elements (such as the TATA box). At least eight different proteins associate to form the general transcription factors: TFIIA, -IIB, -IID, -IIE, -IIF, -IIG, -IIH and -IIS []. During mRNA elongation, Pol II can encounter DNA sequences that cause reverse movement of the enzyme. Such backtracking involves extrusion of the RNA 3'-end into the pore, and can lead to transcriptional arrest. Escape from arrest requires cleavage of the extruded RNA with the help of TFIIS, which induces mRNA cleavage by enhancing the intrinsic nuclease activity of RNA polymerase (Pol) II, past template-encoded pause sites []. TFIIS extends from the polymerase surface via a pore to the internal active site. Two essential and invariant acidic residues in a TFIIS loop complement the Pol II active site and could position a metal ion and a water molecule for hydrolytic RNA cleavage. TFIIS also induces extensive structural changes in Pol II that would realign nucleic acids in the active centre. TFIIS is a protein of about 300 amino acids. It contains three regions: a variable N-terminal domain not required for TFIIS activity; a conserved central domain required for Pol II binding; and a conserved C-terminal C4-type zinc finger essential for RNA cleavage. The zinc finger folds in a conformation termed a zinc ribbon [] characterised by a three-stranded antiparallel beta-sheet and two beta-hairpins. A backbone model for Pol II-TFIIS complex was obtained from X-ray analysis. It shows that a beta hairpin protrudes from the zinc finger and complements the pol II active site []. Some viral proteins also contain the TFIIS zinc ribbon C-terminal domain. The Vaccinia virus protein, unlike its eukaryotic homologue, is an integral RNA polymerase subunit rather than a readily separable transcription factor []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding, 0006351 transcription, DNA-dependent; PDB: 3M4O_I 3S14_I 2E2J_I 4A3J_I 3HOZ_I 1TWA_I 3S1Q_I 3S1N_I 1TWG_I 3I4M_I ....

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=82.75  E-value=1.7  Score=15.83  Aligned_cols=19  Identities=21%  Similarity=0.485  Sum_probs=9.7

Q ss_pred             ecCCCCccccChhhHHHHHH
Q psy10072         15 KCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        15 ~c~~C~~~f~~~~~l~~h~~   34 (84)
                      .|+.|++.+ ....+..|..
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            466666665 3334444443

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF01780 Ribosomal_L37ae: Ribosomal L37ae protein family; InterPro: IPR002674 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=82.62  E-value=0.62  Score=22.56  Aligned_cols=31  Identities=32%  Similarity=0.761  Sum_probs=19.0

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ..|.|+.|++.-..        +...|. |.|..|++.|.
T Consensus        34 ~ky~Cp~Cgk~~vk--------R~a~GI-W~C~~C~~~~A   64 (90)
T PF01780_consen   34 AKYTCPFCGKTSVK--------RVATGI-WKCKKCGKKFA   64 (90)
T ss_dssp             S-BEESSSSSSEEE--------EEETTE-EEETTTTEEEE
T ss_pred             CCCcCCCCCCceeE--------EeeeEE-eecCCCCCEEe
Confidence            35889999875211        112222 89999998774

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This ribosomal protein is found in archaebacteria and eukaryotes []. Ribosomal protein L37 has a single zinc finger-like motif of the C2-C2 type [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 4A1E_Y 4A17_Y 4A1C_Y 4A1A_Y 3O58_g 3IZS_m 3O5H_g 1S1I_9 3IZR_m 1YSH_D ....

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=82.44  E-value=0.8  Score=16.54  Aligned_cols=11  Identities=36%  Similarity=1.083  Sum_probs=8.2

Q ss_pred             CCCeecCCCCc
Q psy10072         11 EKPYKCTFCPF   21 (84)
Q Consensus        11 ~k~~~c~~C~~   21 (84)
                      ..+|.|+.||.
T Consensus        14 ~v~f~CPnCG~   24 (24)
T PF07754_consen   14 AVPFPCPNCGF   24 (24)
T ss_pred             CceEeCCCCCC
Confidence            34788999874

It is likely to bind zinc via its four well-conserved cysteine residues.

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=82.28  E-value=0.92  Score=23.61  Aligned_cols=25  Identities=24%  Similarity=0.453  Sum_probs=16.0

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      ..|.+||+.|..   |.+|+..|++-.|
T Consensus        73 i~clecGk~~k~---LkrHL~~~~gltp   97 (132)
T PF05443_consen   73 IICLECGKKFKT---LKRHLRTHHGLTP   97 (132)
T ss_dssp             EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred             eEEccCCcccch---HHHHHHHccCCCH
Confidence            689999998875   4799999876554

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PRK03824 hypA hydrogenase nickel incorporation protein; Provisional

Probab=82.28  E-value=0.55  Score=24.42  Aligned_cols=15  Identities=20%  Similarity=0.259  Sum_probs=11.8

Q ss_pred             CCeecCCCCccccCh
Q psy10072         12 KPYKCTFCPFTAAHS   26 (84)
Q Consensus        12 k~~~c~~C~~~f~~~   26 (84)
                      ..+.|..||..|...
T Consensus        69 ~~~~C~~CG~~~~~~   83 (135)
T PRK03824         69 AVLKCRNCGNEWSLK   83 (135)
T ss_pred             eEEECCCCCCEEecc
Confidence            458999999887654

>PF11672 DUF3268: Protein of unknown function (DUF3268); InterPro: IPR021686 This entry is represented by Listeria phage P100, Gp150

Probab=80.98  E-value=1.1  Score=22.20  Aligned_cols=37  Identities=22%  Similarity=0.300  Sum_probs=20.0

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce--eeCCCCcc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK--VKCPHCAY   48 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~--~~c~~C~~   48 (84)
                      ||-.|+.||..-.....-...-......+  |.|..|+.
T Consensus         1 ~p~~CpYCg~~~~l~~~~~iYg~~~~~~~~~y~C~~C~A   39 (102)
T PF11672_consen    1 KPIICPYCGGPAELVDGSEIYGHRYDDGPYLYVCTPCDA   39 (102)
T ss_pred             CCcccCCCCCeeEEcccchhcCccCCCCceeEECCCCCc
Confidence            57789999975433322111111111223  89999875

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.

>KOG3408|consensus

Probab=80.72  E-value=0.99  Score=23.11  Aligned_cols=22  Identities=32%  Similarity=0.578  Sum_probs=20.2

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |-|..|.+-|.....|..|.+.
T Consensus        58 fyCi~CaRyFi~~~~l~~H~kt   79 (129)
T KOG3408|consen   58 FYCIECARYFIDAKALKTHFKT   79 (129)
T ss_pred             eehhhhhhhhcchHHHHHHHhc
Confidence            8999999999999999999764

>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues

Probab=80.71  E-value=1.1  Score=17.04  Aligned_cols=25  Identities=24%  Similarity=0.628  Sum_probs=10.9

Q ss_pred             ecCCCCccccChhhHHHHHHhcCCceeeCCCCccc
Q psy10072         15 KCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYK   49 (84)
Q Consensus        15 ~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~   49 (84)
                      .|+.|+..+..          ..+..+.|+.|+..
T Consensus         4 ~Cp~C~se~~y----------~D~~~~vCp~C~~e   28 (30)
T PF08274_consen    4 KCPLCGSEYTY----------EDGELLVCPECGHE   28 (30)
T ss_dssp             --TTT-----E----------E-SSSEEETTTTEE
T ss_pred             CCCCCCCccee----------ccCCEEeCCccccc
Confidence            57788766554          22333888888753

The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=80.48  E-value=1.5  Score=16.96  Aligned_cols=25  Identities=24%  Similarity=0.654  Sum_probs=13.6

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      |.|..|+..+....          +.+..|..||.
T Consensus         1 Y~C~~Cg~~~~~~~----------~~~irC~~CG~   25 (32)
T PF03604_consen    1 YICGECGAEVELKP----------GDPIRCPECGH   25 (32)
T ss_dssp             EBESSSSSSE-BST----------SSTSSBSSSS-
T ss_pred             CCCCcCCCeeEcCC----------CCcEECCcCCC
Confidence            46777877654221          22267777774

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	84
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-08
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-07
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-06
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		4e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		8e-04

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 1  MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH 59
          ++ H+R HTG KPYKC  C + AA SS+++ HLRIH D +  KC  C Y       L  H
Sbjct: 24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83
Query: 60 I 60
          +
Sbjct: 84 L 84

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H+RTHTGEKPYKC FC + AA  +++ YHL  H
Sbjct: 23 HLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1   MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH 59
           +R H RTHTGEKPYKC  C  + +    +  H R H   K  KCP C     ++  LN H
Sbjct: 121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYH-LRIHQD--LKVKCPHCAYKCVKQKDLNTHIER 62
          RTH+GEKPY+C  C      S TM  H L+ H +   K  CPHC     ++ DL  H+ +
Sbjct: 8  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67
Query: 63 RH 64
          +H
Sbjct: 68 QH 69

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 1  MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH 59
          ++ H RTHTGEKPYKC  C  + + SS +  H R H   K  KCP C     +   L+ H
Sbjct: 20 LQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPECGKSFSRSDHLSRH 79

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1  MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLN 57
          ++ H+RTHTGEKPYKCT+  C +  A S  ++ H R H   K  +C  C     +   L 
Sbjct: 33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92
Query: 58 THIER 62
           H++R
Sbjct: 93 LHMKR 97

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 1  MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVK---CPHCAYKCVKQKDLN 57
          +  H  +H+GEKPY C  C         MSYH+R H     K   C  C     +   LN
Sbjct: 23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN 82
Query: 58 THIERRH 64
           HI++ H
Sbjct: 83 GHIKQVH 89

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 3   NHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHI 60
           NHIR HTGEKP+ C F  C    A S  +  H R H   K     C ++   ++  N+  
Sbjct: 80  NHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF--KCEFEGCDRRFANSSD 137
Query: 61  ERRHM 65
            ++HM
Sbjct: 138 RKKHM 142

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	84
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-04

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVK---CPHCAYKCVKQKDLNT 58
           +  RTH+GEKPY+C  C      S TM  H+       V    CPHC     ++ DL  
Sbjct: 4  GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63

Query: 59 HIERRH 64
          H+ ++H
Sbjct: 64 HLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 6e-06
 Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 1  MRNHIRTHTGE--KPYKCTFCPFTAAHSSTMSYHLR 34
          M+ HI     E    + C  C    A  S +  HLR
Sbjct: 31 MKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 53.3 bits (129), Expect = 1e-11
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          R H R H  ++P+KC +C F     S +S H++  
Sbjct: 26 RIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 2e-10
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRH 64
           + +   P KC+ C ++ +  + +  H RIH   +  KC +C++   +  +L+ H+ ++ 
Sbjct: 2  SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKF 60

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 49.0 bits (118), Expect = 1e-09
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVK---CPHCAYKCVKQKD-LNTH 59
          H  +H+GEKPY C  C         MSYH+R H     K   C  C  K   + D LN H
Sbjct: 26 HKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG-KGFSRPDHLNGH 84

Query: 60 IERRH 64
          I++ H
Sbjct: 85 IKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.2 bits (90), Expect = 2e-05
 Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 1/40 (2%)

Query: 8  HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC 46
           +G     C  C         ++ H   H   K   CP C
Sbjct: 2  SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVC 41

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 35.9 bits (84), Expect = 1e-04
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 1  MRNHIRTHTGE--KPYKCTFCPFTAAHSSTMSYHL-RIH 36
          M  H+R+H G   KPY C  C    +    ++ H+ ++H
Sbjct: 51 MSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.6 bits (116), Expect = 1e-09
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 8  HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKV----KCPHCAYKCVKQKDLNTHIERR 63
           +G    +C  C FT    +++++H R H +        C  C  +  K   +  H  + 
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 64 H 64
          H
Sbjct: 62 H 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 3e-06
 Identities = 8/50 (16%), Positives = 15/50 (30%), Gaps = 3/50 (6%)

Query: 1  MRNHIRTHT---GEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCA 47
          +  H R H        + C FC        +++ H        +  P  +
Sbjct: 23 LNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES 72

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 48.2 bits (116), Expect = 3e-09
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC 46
          H+R HTG KPYKC  C + AA SS+++ HLRIH D +  KC  C
Sbjct: 27 HMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.5 bits (96), Expect = 3e-06
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 7  THTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +     P+KC  C    +    +  H+R H
Sbjct: 2  SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH 31

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 47.9 bits (115), Expect = 3e-09
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHC 46
            HIRTHTGEKP+ C  C    A S     H  I   L +     
Sbjct: 20 TTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 46.7 bits (112), Expect = 9e-09
 Identities = 17/33 (51%), Positives = 19/33 (57%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          HIRTHTGEKP+ C  C    A S     H +IH
Sbjct: 53 HIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 44.8 bits (107), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          HIR HTG+KP++C  C    + S  ++ H+R H
Sbjct: 25 HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 57

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.2 bits (108), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GEKPY C  C     H  T+  HLRIH
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 45.2 bits (108), Expect = 4e-08
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 2  RNHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKD-LN 57
          + H+RTHTGEKPY C    C +  A S  ++ H R H   +  +C  C  +   + D L 
Sbjct: 24 KAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD-RAFSRSDHLA 82

Query: 58 THIERRHM 65
           H+ +RH 
Sbjct: 83 LHM-KRHF 89

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.9 bits (107), Expect = 4e-08
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 4  HIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLKV-KCPHCAYKCVKQKDLNTHI 60
          H  +HT + PY+C    C    +  S +  H ++H      K   C++          H+
Sbjct: 22 HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81

Query: 61 ERRH 64
             H
Sbjct: 82 AECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 7/33 (21%), Positives = 11/33 (33%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR 34
          + H + H G    K   C F     +    H+ 
Sbjct: 50 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 1   MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQ---- 53
           +  H+R HTGEKP+KCTF  C  + +    +  HLR H   K   C H    C K     
Sbjct: 55  LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH--EGCSKAFSNA 112

Query: 54  KDLNTHIERRH 64
            D   H  R H
Sbjct: 113 SDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 37.6 bits (88), Expect = 8e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 4   HIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
             RTH+ EKPY C    C       S++  H++  
Sbjct: 119 QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 44.3 bits (106), Expect = 8e-08
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H+  H+  +PY C +C       S M  H  IH
Sbjct: 20 HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH 52

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 1e-07
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVK---CPHCAYKCVKQKD-LNTHIE 61
           T  GE  Y+C  C     H S    H        VK   CP C  K   +KD +  H+ 
Sbjct: 3  FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCF-KEFTRKDNMTAHV- 60

Query: 62 RRH 64
          +  
Sbjct: 61 KII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.5 bits (88), Expect = 2e-05
 Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 1  MRNHIRT--HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL 39
             H  T      K Y C FC         M+ H++I   +
Sbjct: 26 FCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 43.7 bits (104), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
           +  RTHTGEKPY C+ C  T      +  H + +
Sbjct: 4  GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 38

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.8 bits (94), Expect = 4e-06
 Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 5/48 (10%)

Query: 4  HIRTHTGE----KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC 46
          H + +         + C+ C  T    +TM+ H         V+  + 
Sbjct: 34 HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 3/19 (15%), Positives = 4/19 (21%)

Query: 1  MRNHIRTHTGEKPYKCTFC 19
          M  H     G    +    
Sbjct: 63 MARHADNCAGPDGVEGENS 81

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.0 bits (102), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKP++C  C    + S ++  HLR H
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-07
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C+ C    +H  ++S H RIH
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.0 bits (102), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC  C      +S+ + H R+H
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC+ C  +    S +  H + H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-07
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C  +  + S+++ H RIH
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          + H R HTG KP++C  C    + S  +  H R H
Sbjct: 55 KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 2  RNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNT 58
          + H R HTGEKPY+C F  C    + S  +  H R H  +K  +C  C  K  +   L T
Sbjct: 25 QMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT 84

Query: 59 HIERRH 64
          H  R H
Sbjct: 85 HT-RTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.1 bits (100), Expect = 9e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 2   RNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
           + H RTHTGEKP+ C +  C    A S  +  H  +H
Sbjct: 83  KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 8/34 (23%), Positives = 11/34 (32%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
                  +K + C FC      S  +  H R H
Sbjct: 7  GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH 40

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 4e-07
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          R+H   H+ EKP+KC  C      S T++ H  +H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKP+KC  C  +    S ++ H  +H
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GEKPY C  C  T +  S +S H R H
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD 38
           H R HTG KP++C  C  + + S  ++ H++ HQ+
Sbjct: 66  HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.0 bits (102), Expect = 3e-07
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 2  RNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKD-LN 57
          + H+RTHTGEKPYKCT+  C +  A S  ++ H R H   K  +C  C  +   + D L 
Sbjct: 34 KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN-RSFSRSDHLA 92

Query: 58 THIERRH 64
           H+ +RH
Sbjct: 93 LHM-KRH 98

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C  C    +H ++++ H R+H
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-07
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC  C     H+S +S H RIH
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 1   MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
           + NHIR HTGEKP+ C F  C    A S  +  H R H
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 42.3 bits (100), Expect = 1e-06
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 4   HIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK 40
           H RTHTGEKP+KC F  C    A+SS    H+ +H   K
Sbjct: 111 HKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 13/73 (17%), Positives = 20/73 (27%), Gaps = 13/73 (17%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH----------QDLKVKCPHCAYKCVK 52
          +       +       C  T +    +  H+ +                +CP    K  K
Sbjct: 15 SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE-GKSFK 73

Query: 53 QK-DLNTHIERRH 64
           K  L  HI R H
Sbjct: 74 AKYKLVNHI-RVH 85

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 2e-07
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TG++PY+C  C       S++  H R H
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC  C         +  H  +H
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC+ C       S +  H + H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TG KPY C  C    +  S+++ H  IH
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.1 bits (100), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKP+KC  C    +  S ++ H ++H
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY C  C  +   +S +  H R+H
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C       S+++ H   H
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY C  C     H S +  H RIH
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  G+K +KC  C  T   SS+++ H RIH
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 3e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   +  GEKPY C+ C    +  S +  H+R H
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.3 bits (77), Expect = 6e-04
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 4  HIRTHTGEKPYKCT 17
          H+RTH+GEKP   +
Sbjct: 31 HMRTHSGEKPSGPS 44

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.4 bits (101), Expect = 3e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
                  + YKC  C  + +HSS +S H R H
Sbjct: 9  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 41

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 6e-07
 Identities = 17/33 (51%), Positives = 19/33 (57%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H RTHTGEKPYKC  C       S +  H R+H
Sbjct: 37 HRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TG K ++CT C       ST+S H +IH
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.8 bits (99), Expect = 3e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GEKPY+C  C    +   ++  H+R+H
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 3e-07
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GEK +KC  C    + +S++  H  +H
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEK Y C  C  + + +  +  H R+H
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 4e-07
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
           +H      +KPYKC  C  +  +   ++ H  +H
Sbjct: 6  HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH 40

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TG KPY C  C       S +  H R H
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGE P+ C+ C     H + +  H +IH
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.3 bits (98), Expect = 4e-07
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKP++C  C  + + SS ++ H RIH
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.4 bits (98), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TG+KP++CT C  +      +  H RIH
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.8 bits (102), Expect = 4e-07
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H+  H G +PY C  C         +  H++IH
Sbjct: 28 HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.3 bits (93), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H++ HTG KPY+C  C          S+H  + 
Sbjct: 56 HMKIHTGIKPYECNICAKRFMWRD--SFHRHVT 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC 46
             +G+K Y C  C  +  H S    H+ +H  L+   C  C
Sbjct: 3  SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVC 43

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 34.7 bits (81), Expect = 5e-04
 Identities = 5/27 (18%), Positives = 8/27 (29%)

Query: 4   HIRTHTGEKPYKCTFCPFTAAHSSTMS 30
           H    +  K Y+          +S  S
Sbjct: 82  HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.1 bits (100), Expect = 5e-07
 Identities = 17/33 (51%), Positives = 20/33 (60%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H R HTGEKPYKC  C    + +S +  H RIH
Sbjct: 33 HQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.3 bits (98), Expect = 9e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
              H+GEKPY C  C    + SS +  H R+H
Sbjct: 5  SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C  C       S +  H R H
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-07
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + + EKPYKC  C         +  H R+H
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C  C    +  S+++ H  IH
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C         +  H ++H
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.4 bits (98), Expect = 5e-07
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TG KPY C+ C  T +  S +  H R H
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + +GEKP+KC  C      +S +  H R+H
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + +GEKP+KC  C      +S    H R H
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGE+ Y+C+ C       ST+S H RIH
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C+ C  +    S +  H +IH
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GEKPYKC  C       + +  H+ IH
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 41.1 bits (97), Expect = 6e-07
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 3  NHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
          +   + TGEKP+ CT+  C +  + S  +S H R H
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKP+ C  C    +    ++ H RIH
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 6e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + +GEKPYKC  C      +S ++ H RIH
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.6 bits (104), Expect = 6e-07
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 2   RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
           R H RTHTGEKPYKC  C  + +    +  H R H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.2 bits (103), Expect = 7e-07
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 2   RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             H RTHTGEKPYKC  C  + +    ++ H R H
Sbjct: 150 HTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.2 bits (103), Expect = 8e-07
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 2   RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             H RTHTGEKPYKC  C  + +  + +  H R H
Sbjct: 66  TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.2 bits (103), Expect = 8e-07
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
                  GEKPY C  C  + + S  ++ H R H
Sbjct: 10 VAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 6e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKP++C+ C       S +  H R H
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 33.2 bits (77), Expect = 7e-04
 Identities = 9/14 (64%), Positives = 10/14 (71%)

Query: 4  HIRTHTGEKPYKCT 17
          H RTHTGEKP   +
Sbjct: 31 HQRTHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C       S ++ H  IH
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC  C    + +S ++ H RIH
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 7e-07
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  G  PYKC+ C  + +    +  H R+H
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKP++C  C  + + +S +  H RIH
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 7e-07
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   +  GE+ ++C+ C      +S    H RIH
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPY+C  C    A  + ++ H RIH
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + +GEKPYKC  C         + +H R+H
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GEKPY+C+ C  + + S  ++ H   H
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-07
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C  C       + ++ H + H
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C+ C  +    S +  H RIH
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGE+ Y+C+ C    A  ST+  H RIH
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-07
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPY C  C       S +  H +IH
Sbjct: 2  SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GEKPY C +C      S+ +  H RIH
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + +GEKPY+C  C       S +  H R H
Sbjct: 2  SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGE+PY CT C       S +  H +IH
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY C  C  +    S ++ H RIH
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.2 bits (95), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEK YKC  C    + +S +S H +IH
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 2  RNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
          + H   HTGEKP++CTF  C    +    +  H+RIH
Sbjct: 51 KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 1  MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          MR H+ TH G + + C  C      SS +  H  +H
Sbjct: 23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH 57

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPY C  C      S+ ++ HLR+H
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C      SS +  H  +H
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GEKPYKC+ C       + ++ H RIH
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.9 bits (94), Expect = 2e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GEK + C  C     + S +  H R+H
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TG KPY+C  C    + +S ++ H R+H
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKP KCT C       S +  H R H
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.2 bits (95), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHL-RIH 36
          H R+HT EKPY C  C         +  H  +IH
Sbjct: 21 HYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C  C       S +  H +IH
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GEKP++C  C      +S +  H R+H
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GEK YKC  C    + SS +  H R+H
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGE PY+C  C    +    +  H R H
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 2e-06
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + +  K ++C  C       S ++ H RIH
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GE+P+KC  C       S ++ HLR+H
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GEKP+KC  C      +  ++ HLRIH
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.4 bits (93), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPY+C  C    + ++ +  H R+H
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C      +S ++ H RIH
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +G+KPY+C  C  T      ++ H R+H
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGEKPYKC  C      +S +  H  IH
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TG+KPYKC  C      +S ++ H  IH
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C      +S ++ H  IH
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 3e-06
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 4/49 (8%)

Query: 2  RNHIR-THTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPHC 46
           +H +  H  +K + C    C  +      +  H+++H D +   C   
Sbjct: 26 NHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   + TGE+P+KC  C  +   S+ +  H RIH
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C      +S ++ H  IH
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.8 bits (91), Expect = 4e-06
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +GEKPY C  C  T + ++ +  H ++H
Sbjct: 3  SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.6 bits (93), Expect = 4e-06
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          HIR HTG+KP++C  C    + S  ++ H+R H
Sbjct: 40 HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKPYKC  C      +S ++ H R+H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 5e-06
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGE PY+C  C    +    +  H + H
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 39.3 bits (92), Expect = 5e-06
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 2  RNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
          + H RTHTGEKP+ C++  C    A S  +S H R H
Sbjct: 36 KAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 22/36 (61%)

Query: 1  MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          ++ HIRTHT  +PY CT+C F+      ++ H++  
Sbjct: 17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 2/35 (5%)

Query: 4  HIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIH 36
          H  THTGEK + C    C       + M  H    
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 5/67 (7%)

Query: 2   RNHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLKV-KCPHCAYKCVKQK-DLN 57
           + H  +HT + PY+C    C    +  S +  H ++H      K   C+    K      
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS-FVGKTWTLYL 181

Query: 58  THIERRH 64
            H+   H
Sbjct: 182 KHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 8/36 (22%), Positives = 11/36 (30%), Gaps = 2/36 (5%)

Query: 3  NHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH 36
                   K Y C+F  C      +  +  HL  H
Sbjct: 2  GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH 37

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)

Query: 4  HIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIH 36
          H+  HTGEKP+ C    C         ++ H   H
Sbjct: 33 HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)

Query: 2   RNHIRTHTGEKPYKCTFCPFTA-AHSSTMSYHLRIHQD 38
           + H + H G    K   C F     +  + +    HQD
Sbjct: 153 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 4/40 (10%)

Query: 1   MRNHIRTHTGEK--PYKCTF--CPFTAAHSSTMSYHLRIH 36
           M+ H       K   Y C F  C       + +  H   H
Sbjct: 90  MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + TGEKP+KC  C  +      ++ H R+H
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 2   RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYH-LRIH 36
           R H+ +HTGE PYKC+ C         +  H +++H
Sbjct: 83  RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 8  HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQK-DLNTH 59
           +G    +C  C         +  H R H   K  +CP C  KC  +K +L  H
Sbjct: 2  SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCG-KCYFRKENLLEH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 38.6 bits (91), Expect = 2e-05
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR---IHQDLKV-KCPHCAYKCVKQK-DL 56
          + H R HTGEKP++C  C         +  H     +++  +V  C  C  +  +++ +L
Sbjct: 24 KVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQ-ETFRRRMEL 82

Query: 57 NTH 59
            H
Sbjct: 83 RLH 85

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 9e-06
 Identities = 8/33 (24%), Positives = 12/33 (36%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + T  K Y C  C         ++ H +IH
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 9e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             + +GE+PY C  C       S +  HL+ H
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 37.9 bits (89), Expect = 1e-05
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +GE PY+C+ C         +  H R H
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.6 bits (88), Expect = 1e-05
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +G++ Y+C  C  +     +++ H RIH
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.5 bits (88), Expect = 1e-05
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR-IH 36
          +   + TG+KPY+C  C      ++++  H R  H
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
            R  TG KP++C  C  + + S  ++ H + H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.4 bits (85), Expect = 4e-05
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +GEKP+ C+ C    +  S +  H + H
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 33.3 bits (77), Expect = 6e-04
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 4  HIRTHTGEKPYKCT 17
          H +TH  EKP   +
Sbjct: 29 HQQTHAEEKPSGPS 42

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 5e-05
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
             +  GE PY C  C  +     +++ H R  
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 35.1 bits (80), Expect = 4e-04
 Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 2  RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR-----IHQDLKVKCPHCAYKCVKQKDL 56
           ++ +    E  Y+C +C F     +  ++H+      +  +    C  C +   +   L
Sbjct: 7  HHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDAL 66

Query: 57 NTHIERRH 64
          + H  + H
Sbjct: 67 SEHNLKYH 74

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 34.1 bits (79), Expect = 4e-04
 Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHL-RIHQDLK-VKCPHC 46
          +   + +  KPY C  C    +    ++ H+ ++H   +  KC   
Sbjct: 2  SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 34.9 bits (80), Expect = 4e-04
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 1  MRNHIRTHTGEKPYKCT 17
          + NHIR HTGEK    +
Sbjct: 78 LVNHIRVHTGEKSGPSS 94

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 33.7 bits (77), Expect = 4e-04
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 3  NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +   +  GE P+KC+ C       + +  H R H
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.84
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.84
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.81
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.81
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.8
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.8
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.79
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.79
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.79
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.78
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.74
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.74
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.73
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.69
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.69
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.69
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.68
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.68
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.66
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.65
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.63
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.63
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.62
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.62
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.62
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.62
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.62
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.62
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.62
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.62
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.61
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.61
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.61
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.61
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.61
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.61
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.6
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.6
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.6
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.6
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.6
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.59
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.59
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.59
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.59
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.58
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.57
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.55
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.53
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.53
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.52
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.52
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.52
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.52
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.51
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.51
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.51
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.51
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.5
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.48
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.48
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.47
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.47
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.47
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.47
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.46
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.46
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.46
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.44
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.43
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.42
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.4
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.4
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.39
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.38
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.37
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.36
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.34
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.33
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.31
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.28
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.28
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.27
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.25
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.25
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.25
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.25
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.24
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.22
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.21
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.21
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.2
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.2
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.19
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.15
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.14
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.12
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.11
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.1
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	99.09
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.07
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.05
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.01
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.0
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	99.0
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.98
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.98
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.94
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.94
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.93
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.93
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.9
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.9
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.89
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.88
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.86
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.83
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.81
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.8
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.79
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.79
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.77
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.77
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.75
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.75
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.72
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.72
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.72
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.66
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.65
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.65
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.64
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.07
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.62
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.61
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.6
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.6
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.6
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.59
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.58
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.0
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.58
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.58
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.55
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.55
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.54
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.5
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.47
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.47
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.45
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.45
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.45
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.42
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.4
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.67
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.53
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.15
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.07
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.94
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.87
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.02
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.92
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.81
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.81
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.37
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.22
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.49
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	95.15
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.04
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	93.69
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	93.62
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	93.54
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	92.99
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	92.36
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	91.85
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	91.61
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	91.12
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	89.87
2odx_A	80	Cytochrome C oxidase polypeptide IV; all beta-prot	89.73
1wil_A	89	KIAA1045 protein; ring finger domain, structural g	89.48
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	89.1
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	88.95
3cc2_Z	116	50S ribosomal protein L37AE, 50S ribosomal protein	87.9
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	87.09
1v54_F	98	VI, cytochrome C oxidase polypeptide VB; oxidoredu	86.99
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	86.47
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	84.91
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	84.83
2lcq_A	165	Putative toxin VAPC6; PIN domain, Zn ribbon domain	83.74
2y69_F	129	Cytochrome C oxidase subunit 5B; electron transpor	83.69
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	83.66
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.63
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	82.61
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	82.2
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	81.21
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	81.08

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.87  E-value=1.3e-22  Score=90.29  Aligned_cols=57  Identities=30%  Similarity=0.588  Sum_probs=54.3

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      ||||.|.+|++.|.....|..|++.|++.+ |.|..|++.|.+.+.|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            799999999999999999999999999988 999999999999999999999999864

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.2e-22  Score=102.14  Aligned_cols=68  Identities=22%  Similarity=0.435  Sum_probs=53.6

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      |..|+++|++++||.|+.|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|++.+++++|
T Consensus        38 L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           38 LRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCT
T ss_pred             HHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCC
Confidence            4578888888888888888888888888888888877766 8888888888888888888887776654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=1.3e-22  Score=102.97  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=66.3

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      .|.++|.|+++|.|.+|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+.+|++++||.|..
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   83 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA   83 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCC
Confidence            45678999999999999999999999999999999887 999999999999999999999999999998843

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.3e-21  Score=90.54  Aligned_cols=73  Identities=27%  Similarity=0.513  Sum_probs=66.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCc----e-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL----K-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~----~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |..|+++|++++||.|..|++.|.....|..|++.+.+.    + |.|..|++.|.....|..|++.|+++.++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            568999999999999999999999999999999876543    4 999999999999999999999999999987743

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=1.3e-21  Score=94.69  Aligned_cols=71  Identities=18%  Similarity=0.292  Sum_probs=66.0

Q ss_pred             ChhhhhhhcCCCCeecCCCCcccc-ChhhHHHHHHhcCC-ce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAA-HSSTMSYHLRIHQD-LK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~-~~~~l~~h~~~~~~-~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      +..|+++|+++++|.|..|++.|. ....|..|++.|.+ .+ |.|..|++.|.....|..|++.|++++|+..
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            357999999999999999999999 99999999999887 66 9999999999999999999999999998654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.83  E-value=8.2e-21  Score=88.16  Aligned_cols=67  Identities=28%  Similarity=0.443  Sum_probs=62.8

Q ss_pred             hhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      ...+.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+++|++++||.|
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            445778899999999999999999999999999888 9999999999999999999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=8.6e-21  Score=92.63  Aligned_cols=70  Identities=27%  Similarity=0.471  Sum_probs=63.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVL   70 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~   70 (84)
                      |..|+++|.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++++||.
T Consensus        33 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           33 LLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            4678999999999999999999999999999999988877 999999999999999999999999988875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.82  E-value=2e-20  Score=86.84  Aligned_cols=66  Identities=35%  Similarity=0.689  Sum_probs=59.7

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHH-hcCCc-e-eeCCCCccccccchHHHHHHhhhCCC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR-IHQDL-K-VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~-~-~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      |.+|+++|++++||.|..|++.|.....|..|++ .|.+. + |.|..|++.|.....|..|++.++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            5689999999999999999999999999999997 67764 5 99999999999999999999986543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=2.1e-20  Score=88.81  Aligned_cols=67  Identities=28%  Similarity=0.592  Sum_probs=59.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |..|+++|.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|+++|++++
T Consensus        22 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             HHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            4679999999999999999999999999999999888877 999999999999999999999988765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.8e-20  Score=88.53  Aligned_cols=69  Identities=39%  Similarity=0.781  Sum_probs=60.5

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      |..|+++|.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|+++++.
T Consensus        24 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             HHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            4678899999999999999999999999999999888877 99999999999999999999988877654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.81  E-value=6.2e-20  Score=84.59  Aligned_cols=63  Identities=22%  Similarity=0.427  Sum_probs=59.8

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      .+.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4678899999999999999999999999999888 99999999999999999999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=6e-20  Score=84.26  Aligned_cols=65  Identities=29%  Similarity=0.463  Sum_probs=60.4

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      .+.++|++++||.|+.|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|+++.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            35678999999999999999999999999999999887 999999999999999999999988754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=9.7e-20  Score=83.12  Aligned_cols=64  Identities=22%  Similarity=0.498  Sum_probs=60.3

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChh
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVL   70 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~   70 (84)
                      .|+++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++++|.+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5788999999999999999999999999999888 999999999999999999999999988764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.80  E-value=3.9e-20  Score=98.20  Aligned_cols=73  Identities=33%  Similarity=0.547  Sum_probs=54.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |..|+++|.++++|.|+.|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++++||.|..
T Consensus        93 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  166 (190)
T 2i13_A           93 LRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPE  166 (190)
T ss_dssp             HHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCC
Confidence            3567777777777777777777777777777777777666 777777777777777777777777777777643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.80  E-value=4.9e-20  Score=91.39  Aligned_cols=71  Identities=31%  Similarity=0.544  Sum_probs=67.1

Q ss_pred             ChhhhhhhcCCCCeecC--CCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072          1 MRNHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |..|+++|.++++|.|+  .|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|+++++|.|
T Consensus        24 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           24 LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             HHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence            46899999999999999  79999999999999999998877 9999999999999999999999999999988

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=8.9e-20  Score=85.25  Aligned_cols=65  Identities=28%  Similarity=0.523  Sum_probs=58.6

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |..|+++|.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|++.|++
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            4679999999999999999999999999999999988877 9999999999999999999998864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=8.4e-20  Score=88.10  Aligned_cols=67  Identities=10%  Similarity=0.216  Sum_probs=60.4

Q ss_pred             hhhhhhhcCCCCeecCCCCccc-cChhhHHHHHHhcCCce-eeCCCCccccccchHHHHH-HhhhCCCCCh
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTA-AHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTH-IERRHMPGDV   69 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f-~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H-~~~~~~~~~~   69 (84)
                      ..|++.|.++++|.|+.|++.| .....|..|++.| +.+ |.|..|++.|.....|..| +.+|+++..+
T Consensus        23 ~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             HHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             HHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            5688899999999999999999 9999999999999 777 9999999999999999999 8888764433

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.79  E-value=6.5e-20  Score=94.64  Aligned_cols=72  Identities=33%  Similarity=0.590  Sum_probs=58.4

Q ss_pred             ChhhhhhhcCCCCeecCC--CCccccChhhHHHHHHhcCCce-eeCCC--CccccccchHHHHHHhhhCCCCChhhh
Q psy10072          1 MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |..|+++|+++++|.|..  |++.|.....|..|++.|.+.+ |.|..  |++.|.....|..|+++|++++||.|.
T Consensus        78 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           78 LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            456888888888888877  8888888888888888888776 88886  888888888888888888888888763

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.3e-19  Score=88.23  Aligned_cols=67  Identities=16%  Similarity=0.396  Sum_probs=60.8

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHH-hc---CCce-eeCCCCccccccchHHHHH-HhhhCCCCChhhhH
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLR-IH---QDLK-VKCPHCAYKCVKQKDLNTH-IERRHMPGDVLGHI   73 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~-~~---~~~~-~~c~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~   73 (84)
                      .-+|++||.|..|++.|.....|..|++ .|   .+.+ |.|..|++.|...+.|..| +++|++++||.|.+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            4578999999999999999999999997 48   4556 9999999999999999999 79999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.9e-19  Score=89.09  Aligned_cols=73  Identities=21%  Similarity=0.341  Sum_probs=66.1

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHh---cCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRI---HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~---~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |..|+++|.+++||.|+.|++.|.....|..|+..   +.+.+ |.|..|++.|.....|..|++.|++++||.|..
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   99 (124)
T 2dlq_A           23 LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS   99 (124)
T ss_dssp             HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSS
T ss_pred             HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            46899999999999999999999999999999985   45555 999999999999999999999999999998843

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=8.7e-20  Score=96.85  Aligned_cols=69  Identities=32%  Similarity=0.529  Sum_probs=33.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++++||.|
T Consensus        67 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  136 (190)
T 2i13_A           67 RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC  136 (190)
T ss_dssp             HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             HHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            44444444455555555555555445555544444433 4555555555554455555544444444444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=1.1e-20  Score=93.50  Aligned_cols=73  Identities=10%  Similarity=0.074  Sum_probs=65.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHh--cCCce--eeCCCCcccc--ccchHHHHHHhhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRI--HQDLK--VKCPHCAYKC--VKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~--~~~~~--~~c~~C~~~f--~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |..|+++|++++||.|..|++.|.....|..|++.  +.+.+  +.|..|++.|  .....|..|++.|.+++||.|..
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            67899999999999999999999999999999998  65544  5699999988  88999999999999999998854

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.3e-19  Score=80.06  Aligned_cols=61  Identities=26%  Similarity=0.590  Sum_probs=55.6

Q ss_pred             hhhhcCCCCeecCCCCccccChhhHHHHHHh-c-CCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAHSSTMSYHLRI-H-QDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~-~-~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      +++|++++||.|+.|++.|.....|..|++. | .+.+ |.|..|++.|...+.|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            5689999999999999999999999999987 7 4666 9999999999999999999998875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.77  E-value=7.4e-19  Score=87.74  Aligned_cols=71  Identities=25%  Similarity=0.420  Sum_probs=59.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC--CccccccchHHHHHHhhhCCCCChhhh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |..|+++| ++++|.|..|++.|.....|..|++.|.+.+ |.|..  |++.|.....|..|++.|+++++|.|.
T Consensus        23 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   96 (124)
T 1ubd_C           23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   96 (124)
T ss_dssp             HHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCC
T ss_pred             HHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECC
Confidence            45788888 7788888888888888888888888888777 88875  888888888888888888888888774

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.9e-18  Score=82.76  Aligned_cols=66  Identities=35%  Similarity=0.690  Sum_probs=47.1

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCc--e-eeCCCCccccccchHHHHHHh-hhCCC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL--K-VKCPHCAYKCVKQKDLNTHIE-RRHMP   66 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~--~-~~c~~C~~~f~~~~~l~~H~~-~~~~~   66 (84)
                      |..|+++|.++++|.|..|++.|.....|..|++.|.+.  + |.|..|++.|.....|..|++ .|.++
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            356777777777777777777777777777777776664  4 777777777777777777765 45443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.75  E-value=2.7e-18  Score=81.09  Aligned_cols=62  Identities=18%  Similarity=0.302  Sum_probs=55.7

Q ss_pred             hhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHh-hhCCC
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE-RRHMP   66 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~-~~~~~   66 (84)
                      +.++...++|.|++|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++ .|..|
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            445677889999999999999999999999999888 999999999999999999975 56655

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.5e-18  Score=85.09  Aligned_cols=61  Identities=25%  Similarity=0.569  Sum_probs=29.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhh
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      .|+++|.++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.+
T Consensus        27 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   88 (110)
T 2csh_A           27 RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSC   88 (110)
T ss_dssp             HHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             HHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHc
Confidence            44444444444555555555544444555544444444 45555555554444455554443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=3.9e-18  Score=82.25  Aligned_cols=64  Identities=39%  Similarity=0.764  Sum_probs=44.2

Q ss_pred             ChhhhhhhcCCCCeecC--CCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhC
Q psy10072          1 MRNHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |..|+++|.++++|.|+  .|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+++|.
T Consensus        33 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhC
Confidence            34667777777777774  47777777777777777666665 777777777777777777776664

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=2.7e-18  Score=79.69  Aligned_cols=64  Identities=19%  Similarity=0.410  Sum_probs=56.3

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCC---ce-eeCCCCccccccchHHHHHHh-hhCCCCChh
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD---LK-VKCPHCAYKCVKQKDLNTHIE-RRHMPGDVL   70 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~---~~-~~c~~C~~~f~~~~~l~~H~~-~~~~~~~~~   70 (84)
                      .|++++||.|..|++.|.....|..|++.|.+   .+ |.|..|++.|.....|..|++ .|..+.+..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            48899999999999999999999999999875   55 999999999999999999995 566666543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.74  E-value=3.8e-18  Score=74.86  Aligned_cols=56  Identities=30%  Similarity=0.641  Sum_probs=49.0

Q ss_pred             CCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072         10 GEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        10 ~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |++||.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            5789999999999999999999999999877 9999999999999999999998764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.1e-18  Score=88.21  Aligned_cols=73  Identities=32%  Similarity=0.542  Sum_probs=65.3

Q ss_pred             ChhhhhhhcCCCCeecCC--CCccccChhhHHHHHHhcCCce-eeCCC--CccccccchHHHHHH-hhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHI-ERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~~   73 (84)
                      |..|+++|++++||.|..  |++.|.....|..|++.|.+.+ |.|..  |++.|.....|..|+ ..|.+++||.|.+
T Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            467999999999999985  9999999999999999998877 99998  999999999999998 7899999998864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.5e-18  Score=82.85  Aligned_cols=67  Identities=24%  Similarity=0.386  Sum_probs=62.6

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ..|+++++|.| .|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|+++++|.|..
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI   70 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC
Confidence            36899999999 99999999999999999999887 999999999999999999999999999998853

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.73  E-value=2.6e-18  Score=85.76  Aligned_cols=69  Identities=32%  Similarity=0.627  Sum_probs=59.9

Q ss_pred             ChhhhhhhcCCCCeecCC--CCccccChhhHHHHHHhcCCce-eeCC--CCccccccchHHHHHHhhhCCCCCh
Q psy10072          1 MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      |..|+++|.++++|.|..  |++.|.....|..|++.|.+.+ |.|.  .|++.|.....|..|+++|++++++
T Consensus        50 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           50 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            468999999999999985  9999999999999999999877 9995  5999999999999999999998875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=5.5e-18  Score=80.20  Aligned_cols=63  Identities=35%  Similarity=0.752  Sum_probs=48.5

Q ss_pred             ChhhhhhhcCCCCeecC--CCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhh
Q psy10072          1 MRNHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      |..|+++|.++++|.|+  .|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|++.|
T Consensus        23 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             HHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             HHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            35677778888888886  58888888878888877777766 78888888888888888887765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.73  E-value=3.6e-18  Score=84.59  Aligned_cols=63  Identities=32%  Similarity=0.650  Sum_probs=59.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC--CCCccccccchHHHHHHhhh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC--PHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c--~~C~~~f~~~~~l~~H~~~~   63 (84)
                      |..|+++|.++++|.|..|++.|.....|..|++.|.+.+ |.|  +.|++.|.....|..|+++|
T Consensus        54 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           54 LKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            4689999999999999999999999999999999999887 999  89999999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.5e-18  Score=84.89  Aligned_cols=68  Identities=13%  Similarity=0.230  Sum_probs=45.1

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ++++|+++++|.|..|++.|.....|..|++.|. .+|.|..|++.|.....|..|+. |.+++||.|..
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~   74 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE   74 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGG
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCcc
Confidence            4566677777777777777777777777766662 22677777777776667777764 66666666643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.3e-17  Score=79.92  Aligned_cols=67  Identities=24%  Similarity=0.473  Sum_probs=62.3

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      .+.+++||.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+..|+++++|.|..
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   69 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI   69 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC
Confidence            3577899999999999999999999999999877 999999999999999999999999999998854

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=5.5e-18  Score=82.82  Aligned_cols=69  Identities=13%  Similarity=0.185  Sum_probs=62.5

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHh-hhCCCCChhhh
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE-RRHMPGDVLGH   72 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~   72 (84)
                      |..|+++|.  ++|.|..|++.|.....|..|+. |.+.+ |.|..|++.|.....|..|++ .|.++++|.+.
T Consensus        32 l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           32 QGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            467899984  68999999999999999999996 88877 999999999999999999997 89999998763

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.71  E-value=3.5e-17  Score=71.70  Aligned_cols=55  Identities=22%  Similarity=0.566  Sum_probs=51.9

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      ||.|..|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|++.|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999999999999999887 999999999999999999999988765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.7e-17  Score=76.33  Aligned_cols=65  Identities=22%  Similarity=0.432  Sum_probs=60.3

Q ss_pred             cCCCCeecCC--CCccccChhhHHHHHH-hcCCce-eeCCC--CccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          9 TGEKPYKCTF--CPFTAAHSSTMSYHLR-IHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         9 ~~~k~~~c~~--C~~~f~~~~~l~~h~~-~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +++++|.|..  |++.|.....|..|++ .|.+.+ |.|..  |++.|.....|..|+++|++++||.|..
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   73 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   73 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence            5788999987  9999999999999998 688877 99999  9999999999999999999999999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=4.3e-17  Score=77.96  Aligned_cols=65  Identities=15%  Similarity=0.337  Sum_probs=60.3

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCC--CChhhhH
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMP--GDVLGHI   73 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~--~~~~~~~   73 (84)
                      +++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|+++  ++|.|..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS   70 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence            57899999999999999999999999998887 99999999999999999999999987  8898843

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.69  E-value=1.4e-17  Score=83.73  Aligned_cols=63  Identities=16%  Similarity=0.393  Sum_probs=56.8

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      ..|+ .|++++||.|..|++.|.....|..|++.| ..+|.|..|++.|...+.|..|++.|++.
T Consensus        64 ~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           64 YRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3455 689999999999999999999999999999 44499999999999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.69  E-value=3.3e-17  Score=86.91  Aligned_cols=72  Identities=25%  Similarity=0.416  Sum_probs=48.0

Q ss_pred             ChhhhhhhcCCCCeecC--CCCccccChhhHHHHH-HhcC-Cce-eeC--CCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072          1 MRNHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHL-RIHQ-DLK-VKC--PHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~--~C~~~f~~~~~l~~h~-~~~~-~~~-~~c--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |..|+++|.++++|.|.  .|++.|.....|..|+ ..|. +.. |.|  ..|++.|.....|..|++.|++++||.|.
T Consensus        60 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  138 (190)
T 1tf6_A           60 LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP  138 (190)
T ss_dssp             HHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCC
T ss_pred             HHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCC
Confidence            34566777777777776  6777777777777776 4452 333 677  66777777777777777777777777664

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.69  E-value=3.1e-17  Score=76.90  Aligned_cols=62  Identities=23%  Similarity=0.482  Sum_probs=53.1

Q ss_pred             ChhhhhhhcCCCCeecCC--CCccccChhhHHHHHHhcCCceeeCCC---CccccccchHHHHHHhhhC
Q psy10072          1 MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLKVKCPH---CAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~c~~---C~~~f~~~~~l~~H~~~~~   64 (84)
                      |..|+++|++++||.|+.  |++.|.....|..|++.|.+  |.|..   |++.|.....|..|++.|+
T Consensus        19 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           19 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            467888898889999987  99999998889999888877  88888   9999998888999888764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=2e-17  Score=78.37  Aligned_cols=64  Identities=28%  Similarity=0.525  Sum_probs=58.3

Q ss_pred             CCCCeecC--CCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         10 GEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        10 ~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++||.|+  .|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|++++||.|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   67 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI   67 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC
Confidence            57899998  69999999999999999998877 999999999999999999999999999998854

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.69  E-value=2.4e-17  Score=85.01  Aligned_cols=73  Identities=18%  Similarity=0.326  Sum_probs=66.0

Q ss_pred             Chhhhhh-hcCCCC--------eecCCCCccccChhhHHHHHHhcCCce-eeCCC--CccccccchHHHHHHhhhCCCCC
Q psy10072          1 MRNHIRT-HTGEKP--------YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus         1 l~~h~~~-h~~~k~--------~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      |..|+++ |.++.+        |.|..|++.|.....|..|++.|.+.+ |.|..  |++.|.....|..|++.|++++|
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~  120 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP  120 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            4679987 877765        789999999999999999999998877 99998  99999999999999999999999


Q ss_pred             hhhhH
Q psy10072         69 VLGHI   73 (84)
Q Consensus        69 ~~~~~   73 (84)
                      |.|.+
T Consensus       121 ~~C~~  125 (155)
T 2rpc_A          121 FKCEF  125 (155)
T ss_dssp             BCCSS
T ss_pred             ccCCC
Confidence            98864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=4.9e-20  Score=84.46  Aligned_cols=67  Identities=18%  Similarity=0.261  Sum_probs=60.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |..|+++|.+++||.|..|++.|.....|..      ..+|.|..|++.|.....|..|++.|++++||.|..
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            5789999999999999999999999887765      333999999999999999999999999999998853

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.1e-17  Score=74.75  Aligned_cols=59  Identities=27%  Similarity=0.544  Sum_probs=54.4

Q ss_pred             hhhcCCCCeecC--CCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhC
Q psy10072          6 RTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus         6 ~~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      .+|.++++|.|+  .|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            368899999997  69999999999999999999887 999999999999999999998874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.5e-17  Score=83.87  Aligned_cols=65  Identities=32%  Similarity=0.665  Sum_probs=60.6

Q ss_pred             ChhhhhhhcCCCCeecCC--CCccccChhhHHHHH-HhcCCce-eeCCC--CccccccchHHHHHHhhhCC
Q psy10072          1 MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHL-RIHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~-~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |..|+++|++++||.|+.  |++.|.....|..|+ +.|.+.+ |.|..  |++.|.....|..|++.+++
T Consensus        85 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           85 LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            468999999999999998  999999999999998 7898887 99988  99999999999999998874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=3.8e-17  Score=77.36  Aligned_cols=64  Identities=23%  Similarity=0.505  Sum_probs=56.5

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhHHH
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQQ   75 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~   75 (84)
                      ++||.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+..+++ .++.|..+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~   65 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVE   65 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHH
Confidence            578999999999999999999999998877 9999999999999999999998885 677775543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.68  E-value=1.2e-16  Score=77.75  Aligned_cols=66  Identities=21%  Similarity=0.313  Sum_probs=61.2

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ..++++|.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|++.|+++++|.|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   78 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE   78 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC
Confidence            456789999999999999999999999999887 999999999999999999999999999998854

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.1e-16  Score=69.84  Aligned_cols=55  Identities=20%  Similarity=0.381  Sum_probs=50.3

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHH-hhhCCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHI-ERRHMP   66 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~-~~~~~~   66 (84)
                      +||.|..|++.|.....|..|++.|.+.+ |.|..|++.|...+.|..|+ ..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            58999999999999999999999999888 99999999999999999997 466654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=6.3e-17  Score=75.42  Aligned_cols=61  Identities=25%  Similarity=0.434  Sum_probs=57.5

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ||.|..|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+..|+++++|.|..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   62 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV   62 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC
Confidence            6899999999999999999999998877 999999999999999999999999999998854

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.2e-16  Score=78.57  Aligned_cols=66  Identities=23%  Similarity=0.503  Sum_probs=58.9

Q ss_pred             Chhhhhh---hcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhh-hCCC
Q psy10072          1 MRNHIRT---HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIER-RHMP   66 (84)
Q Consensus         1 l~~h~~~---h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~-~~~~   66 (84)
                      |..|++.   +.++++|.|+.|++.|.....|..|++.|.+.+ |.|..|++.|.....|..|+.. |.++
T Consensus        51 l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           51 LLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            4578874   688899999999999999999999999999888 9999999999999999999985 5554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.65  E-value=2e-16  Score=83.87  Aligned_cols=71  Identities=21%  Similarity=0.402  Sum_probs=63.6

Q ss_pred             ChhhhhhhcCCCCeec--CCCCccccChhhHHHHHHhcCCce-eeCC--CCccccccchHHHHHH-hhh-CCCCChhh
Q psy10072          1 MRNHIRTHTGEKPYKC--TFCPFTAAHSSTMSYHLRIHQDLK-VKCP--HCAYKCVKQKDLNTHI-ERR-HMPGDVLG   71 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c--~~C~~~f~~~~~l~~h~~~~~~~~-~~c~--~C~~~f~~~~~l~~H~-~~~-~~~~~~~~   71 (84)
                      |..|+++|.++++|.|  ..|++.|.....|..|++.|.+.+ |.|.  .|++.|.....|..|+ ..| .++++|.|
T Consensus        30 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  107 (190)
T 1tf6_A           30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVC  107 (190)
T ss_dssp             HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEE
T ss_pred             HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeC
Confidence            4689999999999999  889999999999999999999877 9999  8999999999999999 455 36778877

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.63  E-value=6.9e-18  Score=79.94  Aligned_cols=64  Identities=31%  Similarity=0.459  Sum_probs=59.1

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccccccchHHHHHHhhhC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |..|+++|++++||.|..|++.|.....|..|++.+.+.++.|..|++.|.....|..|++..+
T Consensus        19 L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           19 LTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            4689999999999999999999999999999999988755999999999999999999998754

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=7.3e-16  Score=69.44  Aligned_cols=59  Identities=24%  Similarity=0.434  Sum_probs=53.4

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC-CCccccccchHHHHHHhhhCCCCC
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP-HCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~-~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      ..+++||.|..|++.|. ...|..|++. .+.+ |.|. .|++.|...+.|..|+++|....|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45789999999999999 9999999998 7766 9999 999999999999999999887665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=2.7e-16  Score=66.12  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=41.3

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +.|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            368999999999999999999999999999999999887 999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=3e-16  Score=66.02  Aligned_cols=45  Identities=29%  Similarity=0.367  Sum_probs=41.0

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .+|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            368999999999999999999999999999999999887 999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=1.4e-16  Score=67.11  Aligned_cols=45  Identities=24%  Similarity=0.332  Sum_probs=41.2

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      ++|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            368999999999999999999999999999999998877 999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=2.6e-16  Score=66.17  Aligned_cols=44  Identities=34%  Similarity=0.551  Sum_probs=40.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=3.4e-16  Score=65.78  Aligned_cols=45  Identities=29%  Similarity=0.442  Sum_probs=41.4

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +.|+++|++++||.|+.|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            368999999999999999999999999999999999887 999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=3e-16  Score=66.01  Aligned_cols=45  Identities=27%  Similarity=0.389  Sum_probs=41.4

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +.|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            368999999999999999999999999999999999887 999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=3.3e-16  Score=65.84  Aligned_cols=44  Identities=27%  Similarity=0.408  Sum_probs=41.2

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=2.9e-16  Score=66.02  Aligned_cols=45  Identities=33%  Similarity=0.364  Sum_probs=41.3

Q ss_pred             hhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          2 RNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      ..|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            1 GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            368999999999999999999999999999999999887 999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=3.5e-16  Score=65.75  Aligned_cols=44  Identities=25%  Similarity=0.331  Sum_probs=41.2

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.62  E-value=2.9e-16  Score=66.07  Aligned_cols=44  Identities=27%  Similarity=0.434  Sum_probs=40.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=3e-16  Score=65.98  Aligned_cols=44  Identities=30%  Similarity=0.375  Sum_probs=40.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999999999999999888 999877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=3.3e-16  Score=65.86  Aligned_cols=44  Identities=25%  Similarity=0.344  Sum_probs=40.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=3e-16  Score=66.02  Aligned_cols=44  Identities=20%  Similarity=0.204  Sum_probs=40.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.61  E-value=3.4e-16  Score=65.82  Aligned_cols=44  Identities=23%  Similarity=0.371  Sum_probs=40.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=4.3e-16  Score=64.94  Aligned_cols=43  Identities=23%  Similarity=0.374  Sum_probs=39.5

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      |+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6889999999999999999999999999999999887 999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.61  E-value=5.5e-16  Score=65.20  Aligned_cols=44  Identities=27%  Similarity=0.415  Sum_probs=41.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            58999999999999999999999999999999999887 999877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.61  E-value=3.3e-16  Score=65.85  Aligned_cols=44  Identities=30%  Similarity=0.400  Sum_probs=40.3

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999999999999998877 999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=3.9e-16  Score=65.65  Aligned_cols=44  Identities=32%  Similarity=0.478  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            68999999999999999999999999999999999877 999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.60  E-value=4.2e-16  Score=65.54  Aligned_cols=44  Identities=32%  Similarity=0.404  Sum_probs=40.4

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999998887 999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=4.8e-16  Score=65.33  Aligned_cols=44  Identities=27%  Similarity=0.350  Sum_probs=40.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=4.2e-16  Score=65.55  Aligned_cols=44  Identities=30%  Similarity=0.407  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=3.1e-16  Score=65.97  Aligned_cols=44  Identities=27%  Similarity=0.325  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999998877 999876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=1e-15  Score=73.13  Aligned_cols=60  Identities=15%  Similarity=0.122  Sum_probs=54.7

Q ss_pred             CeecCCCCccccChhhHHHHHHh-cCCce---------eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRI-HQDLK---------VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~-~~~~~---------~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      .+.|..|++.|.....|..|++. |.+.+         |.|..|++.|.....|..|+++|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46799999999999999999997 87754         68999999999999999999999999999884

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=4.3e-16  Score=65.50  Aligned_cols=44  Identities=39%  Similarity=0.496  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|+.|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            58999999999999999999999999999999999887 999877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=4.4e-16  Score=65.44  Aligned_cols=44  Identities=34%  Similarity=0.511  Sum_probs=41.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999888 999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=3.6e-16  Score=65.76  Aligned_cols=44  Identities=30%  Similarity=0.431  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999998877 999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=4e-16  Score=65.62  Aligned_cols=44  Identities=27%  Similarity=0.424  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=4.6e-16  Score=65.38  Aligned_cols=44  Identities=34%  Similarity=0.489  Sum_probs=41.1

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=4.3e-16  Score=65.47  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.60  E-value=1.5e-16  Score=71.00  Aligned_cols=53  Identities=15%  Similarity=0.344  Sum_probs=46.9

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHH
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDL   56 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l   56 (84)
                      |..|+++|++++||.|+.|++.|.....|.   +.|.+.+ |.|..|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            578999999999999999999999888775   7788877 9999999999877654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.7e-16  Score=65.11  Aligned_cols=44  Identities=27%  Similarity=0.453  Sum_probs=40.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.6e-16  Score=65.14  Aligned_cols=44  Identities=32%  Similarity=0.401  Sum_probs=40.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999877 999876

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.60  E-value=4.3e-16  Score=69.14  Aligned_cols=40  Identities=30%  Similarity=0.561  Sum_probs=37.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |..|+++|+|++||.|.+|++.|.....|..|++.|++++
T Consensus        20 L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           20 LSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             HHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             HHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5789999999999999999999999999999999999864

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.60  E-value=5.5e-16  Score=65.15  Aligned_cols=44  Identities=30%  Similarity=0.407  Sum_probs=40.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            58999999999999999999999999999999999887 999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.4e-16  Score=64.76  Aligned_cols=44  Identities=27%  Similarity=0.372  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48999999999999999999999999999999999887 999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=7e-16  Score=64.84  Aligned_cols=44  Identities=16%  Similarity=0.110  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999999999999999999999999999887 999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=5.7e-16  Score=65.16  Aligned_cols=44  Identities=30%  Similarity=0.374  Sum_probs=40.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999999999999999999999999998877 999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.59  E-value=9.1e-16  Score=64.51  Aligned_cols=44  Identities=23%  Similarity=0.349  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            58899999999999999999999999999999999887 999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=8.5e-16  Score=71.20  Aligned_cols=51  Identities=18%  Similarity=0.441  Sum_probs=47.5

Q ss_pred             Chhhhh-hhcCCCCeecCC--CCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072          1 MRNHIR-THTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus         1 l~~h~~-~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      |..|++ .|+++++|.|..  |++.|.....|..|++.|.+.+ |.|..|++.|.
T Consensus        25 L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           25 LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             HHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            568999 799999999999  9999999999999999999888 99999999884

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=8.2e-16  Score=64.62  Aligned_cols=44  Identities=27%  Similarity=0.308  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999999999999999999999999999887 999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.1e-16  Score=64.86  Aligned_cols=44  Identities=25%  Similarity=0.321  Sum_probs=40.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48899999999999999999999999999999999877 999877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=8.9e-16  Score=64.55  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999999999999999999999999999887 999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=5e-16  Score=65.29  Aligned_cols=44  Identities=32%  Similarity=0.418  Sum_probs=40.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999887 999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.3e-16  Score=64.78  Aligned_cols=44  Identities=30%  Similarity=0.421  Sum_probs=39.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999998877 888764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.4e-16  Score=78.60  Aligned_cols=68  Identities=15%  Similarity=0.172  Sum_probs=59.5

Q ss_pred             Chhhhhh--hcCCCCee-cCCCCccc--cChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072          1 MRNHIRT--HTGEKPYK-CTFCPFTA--AHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus         1 l~~h~~~--h~~~k~~~-c~~C~~~f--~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      |..|+++  |.+.+++. |..|++.|  .....|..|++.|.+.+ |.|..|++.|.....|..|++.++....
T Consensus        35 L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           35 LTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             HHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            4678998  77777665 99999999  88899999999999887 9999999999999999999998775543

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=8.1e-16  Score=64.64  Aligned_cols=44  Identities=27%  Similarity=0.326  Sum_probs=40.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|+.|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999999999999999999999999998877 998876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=4.1e-16  Score=65.56  Aligned_cols=44  Identities=32%  Similarity=0.449  Sum_probs=40.2

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            68999999999999999999999999999999998877 999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=3.3e-16  Score=65.87  Aligned_cols=44  Identities=27%  Similarity=0.410  Sum_probs=40.3

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999998887 999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=7.6e-16  Score=64.73  Aligned_cols=44  Identities=25%  Similarity=0.392  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|+.|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            58899999999999999999999999999999999887 999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1e-15  Score=64.40  Aligned_cols=44  Identities=30%  Similarity=0.448  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48899999999999999999999999999999998877 999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.5e-15  Score=64.00  Aligned_cols=44  Identities=25%  Similarity=0.383  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHH-hcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR-IHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++ .|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            58999999999999999999999999999999 899887 999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.4e-15  Score=63.96  Aligned_cols=44  Identities=27%  Similarity=0.444  Sum_probs=40.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999998887 999877

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.55  E-value=9.6e-15  Score=68.89  Aligned_cols=63  Identities=24%  Similarity=0.443  Sum_probs=58.1

Q ss_pred             CCCeecCC--CCccccChhhHHHHHHhcCCce-eeCC--CCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         11 EKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        11 ~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      .++|.|..  |++.|.....|..|++.|.+.+ |.|.  .|++.|.....|..|+..|++++||.|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            46799999  9999999999999999999877 9997  69999999999999999999999998854

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=4.1e-15  Score=62.46  Aligned_cols=44  Identities=30%  Similarity=0.449  Sum_probs=39.1

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999999999999999999999999998877 888754

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.53  E-value=6e-15  Score=60.77  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=34.4

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      |+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            6788888888889889888888888888888888776 7764

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.53  E-value=2.8e-14  Score=68.56  Aligned_cols=64  Identities=22%  Similarity=0.450  Sum_probs=58.5

Q ss_pred             CCCCeecCC--CCccccChhhHHHHHHhcCCce-eeCC--CCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         10 GEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        10 ~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ..++|.|..  |++.|.....|..|++.|.+.+ |.|.  .|++.|.....|..|++.|++++||.|..
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   80 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV   80 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC
Confidence            457899996  9999999999999999999877 9996  69999999999999999999999998854

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=4.9e-15  Score=62.20  Aligned_cols=43  Identities=26%  Similarity=0.467  Sum_probs=38.1

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999998877 88863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.53  E-value=6.1e-15  Score=61.92  Aligned_cols=43  Identities=33%  Similarity=0.464  Sum_probs=37.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999888877 88763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=8.2e-15  Score=60.31  Aligned_cols=41  Identities=24%  Similarity=0.422  Sum_probs=35.6

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      |+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6788999999999999999999999999998888877 7763

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6.1e-15  Score=61.91  Aligned_cols=43  Identities=33%  Similarity=0.440  Sum_probs=37.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999888877 88863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6.7e-15  Score=61.75  Aligned_cols=43  Identities=33%  Similarity=0.434  Sum_probs=38.1

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58899999999999999999999999999999888877 88763

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=5.4e-15  Score=62.08  Aligned_cols=43  Identities=26%  Similarity=0.434  Sum_probs=37.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999998888877 88763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=6.6e-15  Score=61.18  Aligned_cols=42  Identities=29%  Similarity=0.431  Sum_probs=36.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            68889999999999999999999999999998888876 7764

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=7e-15  Score=61.67  Aligned_cols=42  Identities=31%  Similarity=0.430  Sum_probs=36.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            58889999999999999999999999999988888877 8876

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=5.6e-15  Score=62.00  Aligned_cols=43  Identities=28%  Similarity=0.461  Sum_probs=37.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999998888877 88763

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=8.2e-15  Score=60.94  Aligned_cols=42  Identities=21%  Similarity=0.373  Sum_probs=36.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            58889999999999999999999999999998888876 7764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=8.7e-15  Score=61.37  Aligned_cols=43  Identities=30%  Similarity=0.456  Sum_probs=38.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999988877 88763

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=4.8e-15  Score=61.64  Aligned_cols=42  Identities=21%  Similarity=0.381  Sum_probs=37.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            58899999999999999999999999999999988877 8774

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=9e-15  Score=61.38  Aligned_cols=43  Identities=26%  Similarity=0.388  Sum_probs=37.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58889999999999999999999999999999888877 88763

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.51  E-value=3.3e-14  Score=64.79  Aligned_cols=58  Identities=22%  Similarity=0.406  Sum_probs=52.0

Q ss_pred             hhhcCCCCeecCC--CCccccChhhHHHHHHhcCCce-eeCCC--CccccccchHHHHHHhhh
Q psy10072          6 RTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHIERR   63 (84)
Q Consensus         6 ~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~   63 (84)
                      ......++|.|..  |++.|.....|..|++.|.+.+ |.|..  |++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456778999988  9999999999999999999888 99964  999999999999998764

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1e-14  Score=61.20  Aligned_cols=42  Identities=24%  Similarity=0.430  Sum_probs=37.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            58899999999999999999999999999999998877 8886

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.9e-15  Score=61.34  Aligned_cols=43  Identities=28%  Similarity=0.415  Sum_probs=37.5

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999998888877 88763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.2e-15  Score=61.33  Aligned_cols=42  Identities=33%  Similarity=0.475  Sum_probs=37.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            58889999999999999999999999999998888877 8875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.51  E-value=1.7e-14  Score=62.55  Aligned_cols=47  Identities=19%  Similarity=0.365  Sum_probs=43.0

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHH-hcCCce-eeCCCCcccccc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLR-IHQDLK-VKCPHCAYKCVK   52 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~~-~~c~~C~~~f~~   52 (84)
                      ..|++++||.|.+|++.|.....|..|++ .|.+.+ |.|..|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            46788999999999999999999999997 899888 999999999975

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=5.9e-15  Score=61.96  Aligned_cols=42  Identities=29%  Similarity=0.426  Sum_probs=37.1

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            68899999999999999999999999999998888877 8775

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.1e-14  Score=61.17  Aligned_cols=43  Identities=30%  Similarity=0.418  Sum_probs=37.4

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58889999999999999999999999999988888877 88763

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=7.4e-15  Score=61.65  Aligned_cols=42  Identities=31%  Similarity=0.516  Sum_probs=37.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            58899999999999999999999999999999888877 8876

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8e-15  Score=61.51  Aligned_cols=43  Identities=33%  Similarity=0.451  Sum_probs=37.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58889999999999999999999999999998888877 88763

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.3e-15  Score=61.46  Aligned_cols=42  Identities=33%  Similarity=0.439  Sum_probs=37.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            58899999999999999999999999999999888877 8876

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.7e-15  Score=61.38  Aligned_cols=43  Identities=33%  Similarity=0.447  Sum_probs=36.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58888999999999999999999888999988888777 87763

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=8.6e-15  Score=60.82  Aligned_cols=42  Identities=26%  Similarity=0.335  Sum_probs=36.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            58889999999999999999999999999998888877 7774

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.3e-14  Score=60.94  Aligned_cols=43  Identities=30%  Similarity=0.428  Sum_probs=38.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999998877 88763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1e-14  Score=61.12  Aligned_cols=42  Identities=33%  Similarity=0.510  Sum_probs=36.6

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            58889999999999999999999999999988888777 8875

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.2e-14  Score=60.98  Aligned_cols=42  Identities=24%  Similarity=0.437  Sum_probs=37.2

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            58889999999999999999999999999998888877 8876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.4e-14  Score=60.72  Aligned_cols=43  Identities=35%  Similarity=0.502  Sum_probs=38.1

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      ++++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5778999999999999999999999999999888877 888876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=8.7e-15  Score=61.37  Aligned_cols=43  Identities=35%  Similarity=0.492  Sum_probs=36.4

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPH   45 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~   45 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58888999999999999999998888888888888776 87753

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=7.9e-15  Score=60.99  Aligned_cols=42  Identities=17%  Similarity=0.230  Sum_probs=34.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            58888888888888888888888888888888888766 7663

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.2e-14  Score=61.00  Aligned_cols=42  Identities=31%  Similarity=0.454  Sum_probs=35.4

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|.+|++.|.....|..|++.|.+.+ |.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            47888888899999999998888888888888888776 7775

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=7.4e-15  Score=60.46  Aligned_cols=41  Identities=24%  Similarity=0.519  Sum_probs=33.9

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            47888888888888888888888888888888887766 665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.5e-14  Score=60.62  Aligned_cols=42  Identities=31%  Similarity=0.462  Sum_probs=37.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            58899999999999999999999999999999988877 8875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=7.1e-15  Score=61.68  Aligned_cols=42  Identities=29%  Similarity=0.479  Sum_probs=37.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            68899999999999999999999999999998888776 8775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.1e-14  Score=61.16  Aligned_cols=42  Identities=29%  Similarity=0.472  Sum_probs=37.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            58899999999999999999999999999999988776 8876

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.47  E-value=2.6e-14  Score=58.74  Aligned_cols=40  Identities=20%  Similarity=0.349  Sum_probs=33.4

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      |+++|++++||.|..|++.|.....|..|++.|.+.+ |.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            6788888888888888888888888888888888766 765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.1e-14  Score=60.21  Aligned_cols=42  Identities=29%  Similarity=0.363  Sum_probs=36.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCC-ce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD-LK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~-~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+ .+ |.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            588889999999999999999998899999888887 66 7775

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.3e-14  Score=60.87  Aligned_cols=43  Identities=26%  Similarity=0.343  Sum_probs=38.1

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .+++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678999999999999999999999999999988777 898876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.8e-14  Score=59.85  Aligned_cols=42  Identities=31%  Similarity=0.572  Sum_probs=35.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47888899999999999999999888999988888777 8775

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=5.2e-14  Score=65.71  Aligned_cols=53  Identities=21%  Similarity=0.368  Sum_probs=50.1

Q ss_pred             Ceec--CCCCccccChhhHHHHHHhcCCce-eeCCC--CccccccchHHHHHHhhhCC
Q psy10072         13 PYKC--TFCPFTAAHSSTMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        13 ~~~c--~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~   65 (84)
                      ||.|  +.|++.|.....|..|++.|.+.+ |.|..  |++.|.....|..|++.|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899  999999999999999999998877 99988  99999999999999999887

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.4e-14  Score=59.08  Aligned_cols=41  Identities=27%  Similarity=0.435  Sum_probs=35.2

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      .|+++|++++||.|.+|++.|.....|..|++.|.+.+ |.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            58889999999999999999999999999988888766 655

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.4e-14  Score=59.64  Aligned_cols=40  Identities=28%  Similarity=0.456  Sum_probs=31.9

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      |+++|++++||.|..|++.|.....|..|++.|.+.+ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            6778888888888888888888888888888777665 655

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.46  E-value=4.4e-14  Score=58.95  Aligned_cols=42  Identities=33%  Similarity=0.661  Sum_probs=38.3

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCA   47 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~   47 (84)
                      ..|++++||.|.+|++.|.....|..|++.|.+.+ |.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            46899999999999999999999999999999888 9999885

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.2e-14  Score=60.44  Aligned_cols=41  Identities=20%  Similarity=0.295  Sum_probs=35.7

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      .|+++|++++||.|.+|++.|.....|..|++.|.+.+ |.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            58889999999999999999999999999988888776 776

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.9e-14  Score=59.27  Aligned_cols=40  Identities=35%  Similarity=0.573  Sum_probs=31.4

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      |+++|++++||.|..|++.|.....|..|++.|.+.+ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            6778888888888888888888888888887777665 654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.4e-14  Score=58.43  Aligned_cols=42  Identities=17%  Similarity=0.181  Sum_probs=36.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            47888999999999999999999999999988888877 7773

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.4e-14  Score=65.55  Aligned_cols=64  Identities=22%  Similarity=0.279  Sum_probs=56.0

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |..|+++|.+++|+.|+.|++.|. ...|..|+ .+.+.+ +.|..|++.|. ...|..|+.++.++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            568999999999999999999995 78899999 777776 99999999877 488999999887764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=9.6e-14  Score=58.56  Aligned_cols=44  Identities=32%  Similarity=0.475  Sum_probs=38.8

Q ss_pred             hhhhhhcCCCCeecC--CCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072          3 NHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      .|.++|++++||.|.  .|++.|.....|..|++.|.+.+ |.|..|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999998  89999999999999999998877 898876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.42  E-value=3.8e-14  Score=61.40  Aligned_cols=49  Identities=22%  Similarity=0.310  Sum_probs=37.5

Q ss_pred             ccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072         21 FTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        21 ~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      +.|.....|..|++.|.+.+ |.|..|++.|...+.|..|+.+|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666667777777777766 88888888888888888888888877776

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.2e-13  Score=57.64  Aligned_cols=41  Identities=29%  Similarity=0.476  Sum_probs=33.7

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      +.++|++++||.|..|++.|.....|..|++.|.+.+ |.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            5677888888888888888888888888888888776 7775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.40  E-value=1.9e-13  Score=57.81  Aligned_cols=42  Identities=14%  Similarity=0.125  Sum_probs=37.0

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCcc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAY   48 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~   48 (84)
                      .|.++++|.|.+|++.|.....|..|++.|.+.+ |.|..|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4778889999999999999999999999998877 99999875

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.2e-13  Score=57.06  Aligned_cols=41  Identities=24%  Similarity=0.273  Sum_probs=32.9

Q ss_pred             hhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          4 HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         4 h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      .+++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4677888888888888888888888888888887776 7775

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.39  E-value=2.4e-13  Score=58.82  Aligned_cols=40  Identities=20%  Similarity=0.350  Sum_probs=37.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |..|+++|++++||.|..|++.|.....|..|++.|.+.+
T Consensus        12 l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A           12 TEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             hhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            5679999999999999999999999999999999998865

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.1e-13  Score=62.86  Aligned_cols=43  Identities=40%  Similarity=0.607  Sum_probs=40.0

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      |..|+++|++++||.|..|++.|.....|..|++.|.+.+ |.|
T Consensus        34 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           34 LSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4689999999999999999999999999999999999877 876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.37  E-value=5.5e-13  Score=53.25  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=32.8

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      .|+++|++++||.|+.|++.|.....|..|++.|.+
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            378999999999999999999999999999988875

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=6.5e-13  Score=54.85  Aligned_cols=39  Identities=13%  Similarity=0.235  Sum_probs=28.5

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      ++|++++||.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            45777777777777777777777777777777666 6664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.34  E-value=3.5e-13  Score=55.30  Aligned_cols=40  Identities=10%  Similarity=0.120  Sum_probs=36.1

Q ss_pred             HHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         33 LRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        33 ~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      ++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45677777 99999999999999999999999999999873

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=7.2e-13  Score=54.10  Aligned_cols=38  Identities=21%  Similarity=0.443  Sum_probs=23.6

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      ++|++++||.|..|++.|.....|..|++.|.+.+ |.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            35666666666666666666666666666666554 544

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.3e-13  Score=56.89  Aligned_cols=42  Identities=12%  Similarity=0.082  Sum_probs=37.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999964

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.4e-13  Score=56.87  Aligned_cols=42  Identities=14%  Similarity=0.090  Sum_probs=37.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.7e-13  Score=56.70  Aligned_cols=42  Identities=14%  Similarity=0.055  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999863

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.8e-13  Score=57.29  Aligned_cols=42  Identities=12%  Similarity=0.081  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.32  E-value=2.3e-13  Score=56.96  Aligned_cols=42  Identities=14%  Similarity=0.059  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|.+++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999853

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.32  E-value=2.5e-13  Score=56.78  Aligned_cols=42  Identities=14%  Similarity=0.067  Sum_probs=37.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=2.4e-13  Score=56.92  Aligned_cols=42  Identities=10%  Similarity=0.017  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999853

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.32  E-value=2e-13  Score=57.10  Aligned_cols=42  Identities=14%  Similarity=0.079  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.5e-13  Score=56.86  Aligned_cols=41  Identities=10%  Similarity=0.063  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456778877 99999999999999999999999999999985

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2e-13  Score=57.10  Aligned_cols=42  Identities=14%  Similarity=0.071  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999864

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.6e-13  Score=56.33  Aligned_cols=42  Identities=12%  Similarity=0.034  Sum_probs=38.0

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-13  Score=57.03  Aligned_cols=42  Identities=10%  Similarity=0.013  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456677777 999999999999999999999999999999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.7e-13  Score=56.70  Aligned_cols=42  Identities=12%  Similarity=0.067  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456777777 999999999999999999999999999999853

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=56.55  Aligned_cols=42  Identities=12%  Similarity=0.082  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.1e-13  Score=54.77  Aligned_cols=39  Identities=13%  Similarity=0.147  Sum_probs=35.6

Q ss_pred             HHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         33 LRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        33 ~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      ++.|.+.+ |.|..|++.|...+.|..|+++|.+++||.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45677777 9999999999999999999999999999987

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.9e-13  Score=55.44  Aligned_cols=42  Identities=10%  Similarity=0.098  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-13  Score=56.97  Aligned_cols=42  Identities=14%  Similarity=0.048  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-13  Score=56.80  Aligned_cols=42  Identities=14%  Similarity=0.023  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456677777 999999999999999999999999999999864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.30  E-value=1.7e-12  Score=59.30  Aligned_cols=40  Identities=38%  Similarity=0.737  Sum_probs=37.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |..|+++|+++++|.|..|++.|.....|..|++.|.+.+
T Consensus        33 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           33 LASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             HHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             HHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999999998765

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.6e-13  Score=56.35  Aligned_cols=42  Identities=17%  Similarity=0.074  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.4e-13  Score=54.79  Aligned_cols=41  Identities=12%  Similarity=0.094  Sum_probs=37.0

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+.+|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            556788877 99999999999999999999999999999873

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.5e-13  Score=56.43  Aligned_cols=42  Identities=14%  Similarity=-0.005  Sum_probs=37.4

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            345677777 999999999999999999999999999999863

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.1e-13  Score=56.18  Aligned_cols=42  Identities=14%  Similarity=0.097  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456678877 999999999999999999999999999999863

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.3e-13  Score=56.97  Aligned_cols=42  Identities=10%  Similarity=0.011  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|.+++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.2e-13  Score=55.62  Aligned_cols=41  Identities=15%  Similarity=0.113  Sum_probs=37.0

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456677877 99999999999999999999999999999984

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=8.8e-13  Score=54.61  Aligned_cols=41  Identities=12%  Similarity=0.100  Sum_probs=36.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+..|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            456788877 99999999999999999999999999999873

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.2e-13  Score=56.49  Aligned_cols=42  Identities=14%  Similarity=0.043  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            456678877 999999999999999999999999999999853

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=9.7e-13  Score=54.98  Aligned_cols=42  Identities=19%  Similarity=0.110  Sum_probs=37.5

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456677777 999999999999999999999999999999863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9e-13  Score=55.05  Aligned_cols=42  Identities=14%  Similarity=0.088  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            456778777 999999999999999999999999999999853

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=6.7e-13  Score=54.46  Aligned_cols=40  Identities=18%  Similarity=0.264  Sum_probs=35.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            345677777 9999999999999999999999999999986

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=8.1e-13  Score=54.15  Aligned_cols=40  Identities=15%  Similarity=0.210  Sum_probs=35.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            345677777 9999999999999999999999999999976

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.6e-13  Score=55.02  Aligned_cols=41  Identities=15%  Similarity=0.154  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            456777777 99999999999999999999999999999984

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1e-12  Score=54.91  Aligned_cols=42  Identities=12%  Similarity=0.056  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            556788877 999999999999999999999999999998853

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.2e-13  Score=54.77  Aligned_cols=40  Identities=23%  Similarity=0.314  Sum_probs=35.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            345677777 9999999999999999999999999999976

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=8.5e-13  Score=54.66  Aligned_cols=41  Identities=12%  Similarity=0.023  Sum_probs=36.8

Q ss_pred             HHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         33 LRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        33 ~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45677777 999999999999999999999999999998853

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.9e-13  Score=55.06  Aligned_cols=42  Identities=12%  Similarity=0.056  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456778777 999999999999999999999999999999853

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.1e-13  Score=56.17  Aligned_cols=42  Identities=14%  Similarity=0.082  Sum_probs=37.5

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456678877 999999999999999999999999999999853

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.3e-13  Score=54.98  Aligned_cols=40  Identities=20%  Similarity=0.286  Sum_probs=36.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            456678877 9999999999999999999999999999976

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.2e-13  Score=55.39  Aligned_cols=41  Identities=15%  Similarity=0.043  Sum_probs=37.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            456778877 99999999999999999999999999999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.2e-12  Score=54.20  Aligned_cols=41  Identities=15%  Similarity=0.135  Sum_probs=36.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+.+|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            456678777 99999999999999999999999999999873

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8e-13  Score=55.21  Aligned_cols=42  Identities=14%  Similarity=0.139  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.2e-12  Score=54.70  Aligned_cols=42  Identities=14%  Similarity=0.092  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999853

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.6e-13  Score=55.31  Aligned_cols=41  Identities=12%  Similarity=0.046  Sum_probs=37.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            456788877 99999999999999999999999999999985

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=54.74  Aligned_cols=42  Identities=12%  Similarity=0.058  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999853

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=1.3e-12  Score=54.53  Aligned_cols=42  Identities=12%  Similarity=-0.052  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999863

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.28  E-value=8.8e-13  Score=55.13  Aligned_cols=42  Identities=12%  Similarity=0.025  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.6e-13  Score=55.34  Aligned_cols=41  Identities=17%  Similarity=0.098  Sum_probs=37.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556788877 99999999999999999999999999999985

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.28  E-value=9.9e-13  Score=54.98  Aligned_cols=42  Identities=17%  Similarity=0.105  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=54.91  Aligned_cols=42  Identities=14%  Similarity=0.018  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999853

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=6.1e-13  Score=55.64  Aligned_cols=41  Identities=20%  Similarity=0.101  Sum_probs=36.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCC-CCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHM-PGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~-~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456677777 9999999999999999999999999 9999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.1e-13  Score=54.85  Aligned_cols=41  Identities=12%  Similarity=0.084  Sum_probs=36.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            456778877 99999999999999999999999999999873

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=54.91  Aligned_cols=41  Identities=12%  Similarity=0.138  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            456777777 99999999999999999999999999999985

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=54.84  Aligned_cols=42  Identities=10%  Similarity=0.032  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|.+++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=3.7e-13  Score=63.78  Aligned_cols=59  Identities=15%  Similarity=0.233  Sum_probs=48.2

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      .+.++|++++||.|..|++.|.....|..|++.|.+.+ |.|..|.+    ...|..|++.+.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            34567999999999999999999999999999999887 99987654    4445566666655

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.27  E-value=1.1e-12  Score=54.86  Aligned_cols=42  Identities=14%  Similarity=0.012  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            556788877 999999999999999999999999999999853

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.4e-12  Score=54.48  Aligned_cols=42  Identities=14%  Similarity=0.046  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456788877 999999999999999999999999999998853

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=54.83  Aligned_cols=42  Identities=14%  Similarity=0.040  Sum_probs=37.5

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456678877 999999999999999999999999999999853

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9.1e-13  Score=55.06  Aligned_cols=41  Identities=17%  Similarity=0.079  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456777777 99999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.4e-13  Score=54.81  Aligned_cols=41  Identities=10%  Similarity=0.097  Sum_probs=36.9

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            456788877 99999999999999999999999999999873

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.5e-12  Score=54.36  Aligned_cols=42  Identities=12%  Similarity=-0.024  Sum_probs=37.5

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456678777 999999999999999999999999999999853

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=54.91  Aligned_cols=42  Identities=14%  Similarity=0.025  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999853

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=54.00  Aligned_cols=42  Identities=12%  Similarity=-0.049  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999853

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=54.85  Aligned_cols=42  Identities=14%  Similarity=0.052  Sum_probs=37.8

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556788877 999999999999999999999999999999853

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=54.76  Aligned_cols=42  Identities=12%  Similarity=-0.001  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556788877 999999999999999999999999999998853

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.3e-12  Score=54.58  Aligned_cols=41  Identities=12%  Similarity=-0.016  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456778877 99999999999999999999999999999885

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=54.43  Aligned_cols=42  Identities=17%  Similarity=0.086  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            456777877 999999999999999999999999999999853

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=54.90  Aligned_cols=41  Identities=12%  Similarity=0.151  Sum_probs=37.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            556788877 99999999999999999999999999999885

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=54.67  Aligned_cols=40  Identities=13%  Similarity=0.040  Sum_probs=36.2

Q ss_pred             HHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         33 LRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        33 ~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      ++.|.+.+ |.|..|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45677777 99999999999999999999999999999985

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=54.30  Aligned_cols=42  Identities=14%  Similarity=0.138  Sum_probs=38.0

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566788877 999999999999999999999999999998853

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=4.1e-12  Score=55.20  Aligned_cols=39  Identities=33%  Similarity=0.818  Sum_probs=36.0

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |..|+++|++++||.|+.|++.|.....|..|++.|.+.
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A           17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             HHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             HHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            468999999999999999999999999999999988764

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.2e-12  Score=54.73  Aligned_cols=42  Identities=17%  Similarity=0.081  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999999853

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=54.90  Aligned_cols=42  Identities=14%  Similarity=0.047  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999853

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-12  Score=54.59  Aligned_cols=42  Identities=12%  Similarity=0.033  Sum_probs=37.4

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            456678877 999999999999999999999999999998853

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.5e-12  Score=54.43  Aligned_cols=42  Identities=14%  Similarity=0.070  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456778877 999999999999999999999999999998853

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1e-12  Score=54.86  Aligned_cols=42  Identities=12%  Similarity=-0.009  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999999853

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=3.5e-12  Score=60.06  Aligned_cols=39  Identities=23%  Similarity=0.524  Sum_probs=35.1

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHH-hcCCc
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLR-IHQDL   39 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~   39 (84)
                      |.+|+++|++++||.|..|++.|.....|..|++ .|.++
T Consensus        44 L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           44 QERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             HHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             HhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            5789999999999999999999999999999975 57654

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=54.48  Aligned_cols=42  Identities=14%  Similarity=0.057  Sum_probs=37.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            455677777 999999999999999999999999999998853

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=7.2e-12  Score=58.52  Aligned_cols=50  Identities=16%  Similarity=0.230  Sum_probs=44.1

Q ss_pred             ChhhhhhhcCC----CCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCcccc
Q psy10072          1 MRNHIRTHTGE----KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKC   50 (84)
Q Consensus         1 l~~h~~~h~~~----k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f   50 (84)
                      |..|+++|.+.    ++|.|..|++.|.....|..|++.|.+.+ +.|..|+..|
T Consensus        31 l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           31 LDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            46788877665    79999999999999999999999999888 9999998765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=54.69  Aligned_cols=42  Identities=14%  Similarity=0.063  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            456678777 999999999999999999999999999998853

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.2e-12  Score=53.47  Aligned_cols=40  Identities=13%  Similarity=0.052  Sum_probs=36.1

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            456778877 9999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=54.32  Aligned_cols=42  Identities=14%  Similarity=0.061  Sum_probs=37.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456778877 999999999999999999999999999998853

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.2e-12  Score=50.59  Aligned_cols=35  Identities=11%  Similarity=0.355  Sum_probs=28.0

Q ss_pred             hhhhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |++|++++||.|..|++.|.....|..|++.|.+.
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            45788888888888888888888888888877654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2e-12  Score=54.01  Aligned_cols=42  Identities=12%  Similarity=0.039  Sum_probs=37.4

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            456678777 999999999999999999999999999999853

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=53.79  Aligned_cols=42  Identities=12%  Similarity=0.054  Sum_probs=37.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|++++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345677877 999999999999999999999999999998853

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.6e-12  Score=54.28  Aligned_cols=42  Identities=12%  Similarity=0.037  Sum_probs=37.5

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|..
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            456678877 999999999999999999999999999999853

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.6e-12  Score=53.83  Aligned_cols=41  Identities=10%  Similarity=-0.016  Sum_probs=36.3

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            345677777 99999999999999999999999999999873

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=54.76  Aligned_cols=41  Identities=12%  Similarity=0.101  Sum_probs=37.1

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556788877 99999999999999999999999999999884

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-12  Score=54.35  Aligned_cols=42  Identities=14%  Similarity=0.054  Sum_probs=37.7

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456788877 999999999999999999999999999998853

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-12  Score=54.46  Aligned_cols=42  Identities=14%  Similarity=0.060  Sum_probs=37.4

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+++|++++||.|..
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            456677877 999999999999999999999999999998853

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.3e-12  Score=54.59  Aligned_cols=41  Identities=15%  Similarity=0.071  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|+..|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456778877 99999999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=54.31  Aligned_cols=40  Identities=15%  Similarity=0.146  Sum_probs=36.4

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+.+|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            456678777 9999999999999999999999999999987

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7.3e-12  Score=51.01  Aligned_cols=37  Identities=16%  Similarity=0.265  Sum_probs=33.9

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhh
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLG   71 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~   71 (84)
                      .|.+.+ |.|..|++.|.....|..|++.|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            466777 9999999999999999999999999999976

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=6e-12  Score=57.22  Aligned_cols=40  Identities=43%  Similarity=0.671  Sum_probs=36.6

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |..|+++|++++||.|+.|++.|.....|..|++.|.+.+
T Consensus        30 L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           30 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             HHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             HHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            5689999999999999999999999999999999887653

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2e-12  Score=54.08  Aligned_cols=40  Identities=8%  Similarity=0.071  Sum_probs=36.0

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4567777 999999999999999999999999999999863

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=9.2e-12  Score=59.79  Aligned_cols=39  Identities=21%  Similarity=0.520  Sum_probs=36.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHH-HHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYH-LRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h-~~~~~~~~   40 (84)
                      |..|+++| +++||.|.+|++.|.....|..| ++.|++.+
T Consensus        51 L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           51 LKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             HHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            56899999 99999999999999999999999 88898877

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-12  Score=54.84  Aligned_cols=41  Identities=12%  Similarity=0.131  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |++.|.+.+ |.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456778877 99999999999999999999999999999985

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.6e-12  Score=54.37  Aligned_cols=42  Identities=12%  Similarity=-0.009  Sum_probs=37.2

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++.|++++||.|.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345677777 999999999999999999999999999999853

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=7.7e-12  Score=49.93  Aligned_cols=35  Identities=14%  Similarity=0.467  Sum_probs=29.2

Q ss_pred             hhhhcCCCCeecCCCCccccChhhHHHH-HHhcCCc
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAHSSTMSYH-LRIHQDL   39 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~~~~l~~h-~~~~~~~   39 (84)
                      |++|++++||.|..|++.|.....|..| ++.|.+.
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4678889999999999999999999999 7777653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=3.9e-12  Score=61.76  Aligned_cols=47  Identities=23%  Similarity=0.418  Sum_probs=41.1

Q ss_pred             Chhhhh-hh---cCCCCeecCCCCccccChhhHHHH-HHhcCCce-eeCCCCc
Q psy10072          1 MRNHIR-TH---TGEKPYKCTFCPFTAAHSSTMSYH-LRIHQDLK-VKCPHCA   47 (84)
Q Consensus         1 l~~h~~-~h---~~~k~~~c~~C~~~f~~~~~l~~h-~~~~~~~~-~~c~~C~   47 (84)
                      |..|++ .|   ++++||.|.+|++.|.....|..| ++.|.+.+ |.|..+.
T Consensus        34 L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           34 FTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             HHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             HHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            467997 59   668999999999999999999999 78999988 9997643

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.5e-12  Score=53.70  Aligned_cols=41  Identities=17%  Similarity=0.061  Sum_probs=36.7

Q ss_pred             HHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         33 LRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        33 ~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      ++.|.+.+ |.|..|++.|.....|..|++.|.+++||.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            45677777 999999999999999999999999999998853

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.2e-12  Score=53.51  Aligned_cols=42  Identities=12%  Similarity=0.054  Sum_probs=37.4

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHh-hhCCCCChhhhH
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE-RRHMPGDVLGHI   73 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~~   73 (84)
                      |++.|.+.+ |.|..|++.|...+.|..|++ .|.+++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            456778877 999999999999999999999 999999998853

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.20  E-value=8.9e-12  Score=54.09  Aligned_cols=37  Identities=54%  Similarity=1.139  Sum_probs=34.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      |..|+++|++++||.|+.|++.|.....|..|++.|.
T Consensus        20 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           20 LNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             HHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4689999999999999999999999999999998764

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=5.1e-12  Score=52.09  Aligned_cols=38  Identities=13%  Similarity=0.180  Sum_probs=34.8

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      .|.+.+ |.|..|++.|...+.|..|++.|++++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            466777 99999999999999999999999999999985

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=1.1e-11  Score=56.02  Aligned_cols=40  Identities=30%  Similarity=0.720  Sum_probs=36.7

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |..|+++|+++++|.|..|++.|.....|..|++.|.+.+
T Consensus        25 L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A           25 LRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             HHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999999999999887654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=1.2e-11  Score=58.82  Aligned_cols=44  Identities=18%  Similarity=0.272  Sum_probs=40.2

Q ss_pred             Chhhhhh-hcCCCC--------eecCCCCccccChhhHHHHHHhcCCce-eeCC
Q psy10072          1 MRNHIRT-HTGEKP--------YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus         1 l~~h~~~-h~~~k~--------~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      |..|+++ |+++++        |.|..|++.|.....|..|++.|.+.+ |.|.
T Consensus        41 L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             HHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4689998 999888        999999999999999999999999887 9886

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.15  E-value=2.8e-11  Score=48.74  Aligned_cols=30  Identities=17%  Similarity=0.333  Sum_probs=14.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCChh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDVL   70 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~   70 (84)
                      |.|..|++.|...+.|..|++.|++++||.
T Consensus         7 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            7 YTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            444444444444444555544444444443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=50.85  Aligned_cols=39  Identities=18%  Similarity=0.201  Sum_probs=35.2

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      +.|.+.+ |.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3567777 99999999999999999999999999999884

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4.5e-11  Score=47.23  Aligned_cols=34  Identities=24%  Similarity=0.639  Sum_probs=27.8

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +.|++++||.|..|++.|.....|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3578888888888888888888888888887764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.1e-11  Score=51.68  Aligned_cols=40  Identities=15%  Similarity=0.032  Sum_probs=35.9

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4577777 999999999999999999999999999999853

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.14  E-value=4.5e-11  Score=46.91  Aligned_cols=33  Identities=24%  Similarity=0.650  Sum_probs=22.9

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +|++++||.|..|++.|.....|..|++.|.+.
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            356777777777777777777777777666553

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.13  E-value=5.2e-11  Score=46.63  Aligned_cols=32  Identities=22%  Similarity=0.420  Sum_probs=22.1

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |++++||.|..|++.|.....|..|++.|.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            56677777777777777777777777666543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.6e-11  Score=47.78  Aligned_cols=34  Identities=21%  Similarity=0.564  Sum_probs=27.2

Q ss_pred             hhhcCCCCeecCCCCccccCh-hhHHHHHHhcCCc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHS-STMSYHLRIHQDL   39 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~-~~l~~h~~~~~~~   39 (84)
                      ++|++++||.|..|++.|... ..|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            467888888888888888888 8888888877654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=3.9e-11  Score=52.55  Aligned_cols=39  Identities=33%  Similarity=0.685  Sum_probs=34.9

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHH-HhcCCc
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHL-RIHQDL   39 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~-~~~~~~   39 (84)
                      |..|+++|++++||.|+.|++.|.....|..|+ ..|.+.
T Consensus        18 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           18 LKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             HHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             HHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            468999999999999999999999999999997 567654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=6.6e-11  Score=46.65  Aligned_cols=34  Identities=32%  Similarity=0.695  Sum_probs=27.5

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .+|++++||.|..|++.|.....|..|++.|.+.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3578888888888888888888888888877764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=3.3e-11  Score=54.75  Aligned_cols=37  Identities=38%  Similarity=0.837  Sum_probs=34.2

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcC
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      |..|+++|.+++||.|..|++.|.....|..|++.|+
T Consensus        37 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           37 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             HHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            4689999999999999999999999999999998764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=8.9e-11  Score=47.29  Aligned_cols=33  Identities=21%  Similarity=0.533  Sum_probs=26.8

Q ss_pred             hhcCCCCeecCC--CCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .+++++||.|+.  |++.|...+.|..|++.|++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467888888875  888888888888888888764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=7e-11  Score=46.64  Aligned_cols=33  Identities=18%  Similarity=0.366  Sum_probs=25.9

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .|++++||.|..|++.|.....|..|++.|.+.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            577788888888888888888888888777654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.10  E-value=9.9e-11  Score=47.05  Aligned_cols=36  Identities=17%  Similarity=0.390  Sum_probs=31.8

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHHhcCCce-eeC
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKC   43 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c   43 (84)
                      |++++||.|..|++.|.....|..|++.|.+.+ |.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            678999999999999999999999999999876 643

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.3e-11  Score=51.49  Aligned_cols=40  Identities=13%  Similarity=0.081  Sum_probs=35.9

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +.|.+.+ |.|..|++.|.....|..|++.|++++||.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4577777 999999999999999999999999999998853

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=99.09  E-value=6.8e-11  Score=49.57  Aligned_cols=37  Identities=16%  Similarity=0.326  Sum_probs=29.2

Q ss_pred             hhhhhhcCCCCeecC--CCCccccChhhHHHHHHhcCCc
Q psy10072          3 NHIRTHTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .|...|++++||.|.  .|++.|.....|..|++.|.+.
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            456678888888885  6888888888888888887764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.07  E-value=9.9e-11  Score=49.31  Aligned_cols=34  Identities=26%  Similarity=0.537  Sum_probs=26.4

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHH-hcCCce
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLR-IHQDLK   40 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~~   40 (84)
                      +|++++||.|..|++.|.....|..|++ .|.+..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4788888888888888888888888888 777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.9e-10  Score=45.27  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=26.3

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .|++++||.|..|++.|.....|..|++.|.+.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            467788888888888888888888888877654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1e-11  Score=59.70  Aligned_cols=52  Identities=13%  Similarity=0.183  Sum_probs=45.3

Q ss_pred             cccChhhHHHHHHhcCCce-eeCCCCccccc-cchHHHHHHhhhCC-CCChhhhH
Q psy10072         22 TAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV-KQKDLNTHIERRHM-PGDVLGHI   73 (84)
Q Consensus        22 ~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~-~~~~l~~H~~~~~~-~~~~~~~~   73 (84)
                      .+.....+..|++.|.+.+ |.|..|++.|. ....|..|++.|++ +++|.|..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~   59 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH   59 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC
Confidence            4555667788999999888 99999999999 99999999999998 89998854

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=2.9e-10  Score=51.33  Aligned_cols=31  Identities=19%  Similarity=0.293  Sum_probs=18.5

Q ss_pred             eeCCC--CccccccchHHHHHH-hhhCCCCChhh
Q psy10072         41 VKCPH--CAYKCVKQKDLNTHI-ERRHMPGDVLG   71 (84)
Q Consensus        41 ~~c~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~   71 (84)
                      |.|..  |++.|.+.++|..|+ ++|++++|+.|
T Consensus        28 YkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           28 YRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             eECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            66643  666666666666665 35666666655

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=6.3e-11  Score=49.81  Aligned_cols=38  Identities=18%  Similarity=0.103  Sum_probs=34.0

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +.+.+ |.|..|++.|.....|..|+++|++++||.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP   45 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC
Confidence            44555 999999999999999999999999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.3e-10  Score=48.15  Aligned_cols=39  Identities=15%  Similarity=0.296  Sum_probs=35.0

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      .|.+.+ |.|..|++.|.....|..|+++|+++++|.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            466767 999999999999999999999999999998853

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.1e-10  Score=44.69  Aligned_cols=33  Identities=24%  Similarity=0.549  Sum_probs=24.9

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .|++++||.|..|++.|.....|..|++.|.+.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            466777888888888888888888887777654

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.7e-11  Score=49.05  Aligned_cols=40  Identities=13%  Similarity=0.193  Sum_probs=35.6

Q ss_pred             HhcCCce-eeCC--CCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         34 RIHQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        34 ~~~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +.|.+.+ |.|.  .|++.|.....|..|+++|.+++||.|..
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4567777 9998  89999999999999999999999999853

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=4.6e-10  Score=50.41  Aligned_cols=43  Identities=9%  Similarity=0.080  Sum_probs=35.7

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      ..+.+++||.|.+|++.|.....|..|++.|++....+..++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~   48 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDL   48 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccC
Confidence            3578899999999999999999999999999987655555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.6e-10  Score=51.46  Aligned_cols=39  Identities=15%  Similarity=0.335  Sum_probs=33.9

Q ss_pred             hhcCCCCeecCC--CCccccChhhHHHHH-HhcCCce-eeCCC
Q psy10072          7 THTGEKPYKCTF--CPFTAAHSSTMSYHL-RIHQDLK-VKCPH   45 (84)
Q Consensus         7 ~h~~~k~~~c~~--C~~~f~~~~~l~~h~-~~~~~~~-~~c~~   45 (84)
                      .++|+|||.|..  |++.|...+.|..|+ +.|++.+ +-|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            368999999975  999999999999997 6899887 77765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.2e-10  Score=46.22  Aligned_cols=34  Identities=18%  Similarity=0.365  Sum_probs=30.6

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      .|.+.+ |.|..|++.|...+.|..|++.|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467777 9999999999999999999999998875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=99.00  E-value=1.7e-10  Score=45.95  Aligned_cols=26  Identities=19%  Similarity=0.314  Sum_probs=22.0

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHH
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHL   33 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~   33 (84)
                      +.+++||.|.+|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            56788888888888888888888887

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.00  E-value=4.5e-10  Score=43.83  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=29.5

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      |.+.+ |.|..|++.|.+.+.|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            45666 9999999999999999999999998765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.98  E-value=6.1e-10  Score=43.51  Aligned_cols=33  Identities=9%  Similarity=0.180  Sum_probs=29.5

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      |.+.+ |.|..|++.|...+.|..|++.|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            55666 9999999999999999999999998765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=3.5e-10  Score=50.35  Aligned_cols=38  Identities=29%  Similarity=0.517  Sum_probs=33.7

Q ss_pred             Chhhhhh-h-cCCCCeecCCCCccccChhhHHHHHHhcCC
Q psy10072          1 MRNHIRT-H-TGEKPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus         1 l~~h~~~-h-~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      |..|+++ | ++++||.|+.|++.|.....|..|++.+.+
T Consensus        26 l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           26 FCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             HHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4679988 7 689999999999999999999999987654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.94  E-value=2.9e-10  Score=45.03  Aligned_cols=35  Identities=23%  Similarity=0.471  Sum_probs=30.5

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      |++.|.+.+ |.|..|++.|.....|..|++.|.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            456678877 99999999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.94  E-value=8.2e-10  Score=42.77  Aligned_cols=29  Identities=24%  Similarity=0.665  Sum_probs=15.8

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      |.|..|++.|...+.|..|+.+|++++||
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            45555555555555555555555555554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.93  E-value=3.5e-10  Score=51.18  Aligned_cols=36  Identities=47%  Similarity=0.898  Sum_probs=32.2

Q ss_pred             ChhhhhhhcCCCCeecCC--CCccccChhhHHHHHHhc
Q psy10072          1 MRNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~   36 (84)
                      |..|+++|++++||.|..  |++.|.....|..|++.|
T Consensus        35 L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           35 LKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             HHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             HHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            468999999999999964  999999999999998754

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=4.9e-10  Score=44.61  Aligned_cols=30  Identities=23%  Similarity=0.487  Sum_probs=15.3

Q ss_pred             cCCCCeecC--CCCccccChhhHHHHHHhcCC
Q psy10072          9 TGEKPYKCT--FCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus         9 ~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ++++||.|.  .|++.|.....|..|++.|.+
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            445555555  355555555555555554443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.90  E-value=1e-09  Score=43.54  Aligned_cols=33  Identities=24%  Similarity=0.285  Sum_probs=25.2

Q ss_pred             hhcCCCCeecC--CCCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCT--FCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~--~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .|++++||.|.  .|++.|...+.|..|++.|.+.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            36778888887  4888888888888888777654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=7.8e-10  Score=49.34  Aligned_cols=38  Identities=16%  Similarity=0.297  Sum_probs=34.0

Q ss_pred             ChhhhhhhcCCCCeecC-CCCccccChhhHHHHHHhcCCc
Q psy10072          1 MRNHIRTHTGEKPYKCT-FCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~-~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |..|+++ ++++||.|+ .|++.|.....|..|++.|...
T Consensus        25 L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A           25 IQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             HHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             HHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            4679999 999999999 9999999999999999987643

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=6.8e-10  Score=47.71  Aligned_cols=39  Identities=18%  Similarity=0.182  Sum_probs=34.1

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHh-hhCCCCChhhhHH
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIE-RRHMPGDVLGHIQ   74 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~~~   74 (84)
                      +.+.+ |.|..|++.|.....|..|++ +|.+++||.|..+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C   47 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW   47 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCC
Confidence            45556 999999999999999999997 8999999998653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.7e-10  Score=50.98  Aligned_cols=40  Identities=23%  Similarity=0.425  Sum_probs=34.7

Q ss_pred             ChhhhhhhcC---CCCeecCCCCccccChhhHHHHHH-hcCCce
Q psy10072          1 MRNHIRTHTG---EKPYKCTFCPFTAAHSSTMSYHLR-IHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~---~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~~   40 (84)
                      |..|+++|++   +++|.|..|++.|.....|..|++ .|.+..
T Consensus        23 L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A           23 LNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             HHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             HHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            5689999986   899999999999999999999995 566554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=42.21  Aligned_cols=31  Identities=26%  Similarity=0.506  Sum_probs=28.1

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce-ee
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VK   42 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~   42 (84)
                      +||.|.+|++.|.....|..|++.|.+.+ |.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999876 53

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=2.3e-09  Score=42.60  Aligned_cols=34  Identities=21%  Similarity=0.383  Sum_probs=30.0

Q ss_pred             cCCce-eeCC--CCccccccchHHHHHHhhhCCCCCh
Q psy10072         36 HQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        36 ~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      |.+.+ |.|.  .|++.|...+.|..|++.|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            34556 9999  6999999999999999999999887

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.83  E-value=3.9e-09  Score=39.44  Aligned_cols=27  Identities=30%  Similarity=0.736  Sum_probs=17.6

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            566666666666666666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.5e-09  Score=41.12  Aligned_cols=33  Identities=27%  Similarity=0.556  Sum_probs=28.8

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      .|.+.+ |.|..|++.|.....|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            356666 999999999999999999999998763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.81  E-value=4.8e-09  Score=38.48  Aligned_cols=26  Identities=46%  Similarity=0.968  Sum_probs=18.3

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      ++||.|..|++.|.....|..|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35677777777777777777776655

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=4.1e-09  Score=41.32  Aligned_cols=33  Identities=15%  Similarity=0.095  Sum_probs=28.4

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      .|.+.+ |.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            355666 999999999999999999999988753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.6e-09  Score=41.75  Aligned_cols=33  Identities=27%  Similarity=0.460  Sum_probs=28.6

Q ss_pred             hcCCce-eeCCCCccccccc-hHHHHHHhhhCCCC
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQ-KDLNTHIERRHMPG   67 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~-~~l~~H~~~~~~~~   67 (84)
                      .|.+.+ |.|..|++.|... +.|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            466666 9999999999999 99999999988753

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.80  E-value=2e-09  Score=53.71  Aligned_cols=59  Identities=17%  Similarity=0.199  Sum_probs=45.5

Q ss_pred             CCeecCCCCcccc------ChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhH
Q psy10072         12 KPYKCTFCPFTAA------HSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHI   73 (84)
Q Consensus        12 k~~~c~~C~~~f~------~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   73 (84)
                      +++.|..|.+.|.      ....|..|+ .|.+.+ |.|..|++.|.....|..|++.|  ++||.|..
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~  105 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV  105 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTT
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCC
Confidence            4456666665554      555666676 466666 99999999999999999999998  88898854

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.79  E-value=4.7e-09  Score=38.78  Aligned_cols=26  Identities=31%  Similarity=0.729  Sum_probs=17.7

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      +||.|..|++.|.....|..|++.|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777766554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=5.8e-09  Score=40.86  Aligned_cols=33  Identities=24%  Similarity=0.482  Sum_probs=28.6

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      .|.+.+ |.|..|++.|.....|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            356666 999999999999999999999988753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.79  E-value=4.8e-09  Score=38.99  Aligned_cols=26  Identities=23%  Similarity=0.654  Sum_probs=13.8

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            45555555555555555555554443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=5.8e-09  Score=40.81  Aligned_cols=32  Identities=22%  Similarity=0.265  Sum_probs=28.2

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.+.+ |.|..|++.|.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            55666 999999999999999999999998764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.77  E-value=4e-09  Score=38.80  Aligned_cols=26  Identities=31%  Similarity=0.729  Sum_probs=17.9

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      ++||.|..|++.|.....|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777776654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.77  E-value=8.8e-09  Score=38.20  Aligned_cols=26  Identities=23%  Similarity=0.556  Sum_probs=16.3

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            56666666666666666666665554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.1e-09  Score=41.71  Aligned_cols=32  Identities=19%  Similarity=0.409  Sum_probs=27.9

Q ss_pred             hcCCce-eeCCCCccccccchHHHHH-HhhhCCC
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTH-IERRHMP   66 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H-~~~~~~~   66 (84)
                      .|.+.+ |.|..|++.|...+.|..| +..|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467777 9999999999999999999 8888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1e-08  Score=40.13  Aligned_cols=32  Identities=16%  Similarity=0.209  Sum_probs=27.8

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +.+.+ |.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            44556 999999999999999999999998763

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.75  E-value=7.2e-09  Score=47.37  Aligned_cols=38  Identities=32%  Similarity=0.599  Sum_probs=32.7

Q ss_pred             Chhhhh-hhcCC-CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072          1 MRNHIR-THTGE-KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus         1 l~~h~~-~h~~~-k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      |..|++ .|.++ ++|.|+.|++.|.....|..|++.+.+
T Consensus        31 L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           31 MKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             HHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             HHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            467987 68775 899999999999999999999987543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.75  E-value=1.2e-08  Score=38.80  Aligned_cols=28  Identities=25%  Similarity=0.536  Sum_probs=18.5

Q ss_pred             CCeecC--CCCccccChhhHHHHHHhcCCc
Q psy10072         12 KPYKCT--FCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        12 k~~~c~--~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +||.|.  .|++.|.....|..|++.|.+.
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566676  6777777666677776666553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.2e-08  Score=40.93  Aligned_cols=31  Identities=23%  Similarity=0.478  Sum_probs=27.0

Q ss_pred             cCCce-eeCCC--CccccccchHHHHHHhhhCCC
Q psy10072         36 HQDLK-VKCPH--CAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        36 ~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +.+.+ |.|..  |++.|.+.+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            44566 99986  999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.72  E-value=8.6e-09  Score=38.15  Aligned_cols=27  Identities=30%  Similarity=0.525  Sum_probs=17.1

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            356666666666666666666665544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.72  E-value=9.1e-09  Score=43.11  Aligned_cols=34  Identities=15%  Similarity=0.234  Sum_probs=27.5

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHh-hhCCCCCh
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIE-RRHMPGDV   69 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~-~~~~~~~~   69 (84)
                      |.+.+ |.|..|++.|.....|..|++ .|.++.+-
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            56667 999999999999999999999 88876654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.72  E-value=8.1e-09  Score=38.25  Aligned_cols=26  Identities=38%  Similarity=0.667  Sum_probs=15.3

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            55666666666666666666555544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.70  E-value=1.5e-08  Score=38.29  Aligned_cols=28  Identities=29%  Similarity=0.637  Sum_probs=16.6

Q ss_pred             CCeecC--CCCccccChhhHHHHHHhcCCc
Q psy10072         12 KPYKCT--FCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        12 k~~~c~--~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +||.|.  .|++.|.....|..|++.|.+.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            355665  6666666666666666655543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=2.6e-09  Score=50.46  Aligned_cols=39  Identities=15%  Similarity=0.242  Sum_probs=35.2

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhh
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      ..|.+.+ |.|..|++.|.....|..|+++|++++||.|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~   57 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK   57 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc
Confidence            4577777 99999999999999999999999999999884

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.65  E-value=2.6e-08  Score=37.02  Aligned_cols=25  Identities=32%  Similarity=0.883  Sum_probs=12.1

Q ss_pred             CeecCCCCccccChhhHHHHHHhcC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      ||.|..|++.|.....|..|++.|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHc
Confidence            4445555555554444554544443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.65  E-value=1e-09  Score=42.19  Aligned_cols=29  Identities=21%  Similarity=0.558  Sum_probs=20.4

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      |.|..|++.|...+.|..|+++|++++|+
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            56777777777777777777777776664

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.64  E-value=3.3e-09  Score=44.27  Aligned_cols=36  Identities=14%  Similarity=0.247  Sum_probs=30.4

Q ss_pred             HHHhcCCce-eeCC--CCccccccchHHHHHHhhhCCCC
Q psy10072         32 HLRIHQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        32 h~~~~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +...|.+.+ |.|.  .|++.|...+.|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            345577777 9995  79999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=3.3e-09  Score=39.54  Aligned_cols=26  Identities=27%  Similarity=0.625  Sum_probs=14.7

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555666655555555555555543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.07  E-value=3.5e-09  Score=39.65  Aligned_cols=27  Identities=37%  Similarity=0.759  Sum_probs=16.4

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            456666666666666666666655544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.62  E-value=2.6e-08  Score=36.28  Aligned_cols=24  Identities=38%  Similarity=0.787  Sum_probs=11.9

Q ss_pred             eecCCCCccccChhhHHHHHHhcC
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      |.|..|++.|.....|..|++.|.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555555555555544443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.61  E-value=1.3e-08  Score=40.34  Aligned_cols=24  Identities=17%  Similarity=0.303  Sum_probs=21.9

Q ss_pred             CCce-eeCCCCccccccchHHHHHH
Q psy10072         37 QDLK-VKCPHCAYKCVKQKDLNTHI   60 (84)
Q Consensus        37 ~~~~-~~c~~C~~~f~~~~~l~~H~   60 (84)
                      .+++ |.|..|++.|.+.++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566 99999999999999999998

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.60  E-value=2.5e-08  Score=37.21  Aligned_cols=26  Identities=23%  Similarity=0.547  Sum_probs=13.8

Q ss_pred             CeecCCCCccccChhhHHHH-HHhcCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYH-LRIHQD   38 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h-~~~~~~   38 (84)
                      ||.|..|++.|.....|..| ++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 344443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.60  E-value=5e-08  Score=36.06  Aligned_cols=27  Identities=22%  Similarity=0.513  Sum_probs=24.9

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|...+.|..|++.|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            899999999999999999999998763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.60  E-value=1.1e-09  Score=42.12  Aligned_cols=29  Identities=21%  Similarity=0.408  Sum_probs=26.3

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      +||.|..|++.|.....|..|++.|.+.+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999988765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.59  E-value=4.1e-08  Score=36.47  Aligned_cols=28  Identities=25%  Similarity=0.675  Sum_probs=25.6

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      |.|..|++.|...+.|..|+..|+++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            7899999999999999999999987754

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.58  E-value=5.8e-08  Score=36.04  Aligned_cols=27  Identities=15%  Similarity=0.306  Sum_probs=24.9

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|.....|..|++.|++++
T Consensus         4 ~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            4 YQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             EECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            899999999999999999999988753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=5.9e-09  Score=37.88  Aligned_cols=25  Identities=40%  Similarity=0.729  Sum_probs=15.7

Q ss_pred             CCeecCCCCccccChhhHHHHHHhc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      +||.|..|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666666544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.58  E-value=1.8e-09  Score=47.69  Aligned_cols=41  Identities=17%  Similarity=0.178  Sum_probs=34.1

Q ss_pred             HHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCChhhhHH
Q psy10072         31 YHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDVLGHIQ   74 (84)
Q Consensus        31 ~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   74 (84)
                      .|++.|.+.+ |.|..|++.|.....|.   ..|.+++||.|..+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C   45 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFC   45 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSS
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCC
Confidence            3566788877 99999999999988776   78999999998643

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.58  E-value=4.7e-08  Score=38.51  Aligned_cols=32  Identities=19%  Similarity=0.213  Sum_probs=27.4

Q ss_pred             cCCce-eeCC--CCccccccchHHHHHHhhhCCCC
Q psy10072         36 HQDLK-VKCP--HCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        36 ~~~~~-~~c~--~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +.+.+ |.|.  .|++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45666 9998  59999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.55  E-value=5.9e-08  Score=35.80  Aligned_cols=27  Identities=19%  Similarity=0.374  Sum_probs=24.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|...+.|..|++.|++++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999998753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=6.1e-08  Score=43.41  Aligned_cols=33  Identities=12%  Similarity=0.242  Sum_probs=28.9

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      +.+.+ |.|..|++.|.+...|..|+++|+++..
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            44556 9999999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.54  E-value=5.9e-08  Score=35.28  Aligned_cols=26  Identities=23%  Similarity=0.415  Sum_probs=23.2

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      |.|..|++.|...+.|..|++.|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            68999999999999999999988763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=7.6e-08  Score=35.45  Aligned_cols=27  Identities=19%  Similarity=0.429  Sum_probs=24.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|.....|..|++.|.+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             ccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            899999999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.50  E-value=9.4e-08  Score=35.22  Aligned_cols=25  Identities=24%  Similarity=0.489  Sum_probs=15.8

Q ss_pred             CeecC--CCCccccChhhHHHHHHhcC
Q psy10072         13 PYKCT--FCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        13 ~~~c~--~C~~~f~~~~~l~~h~~~~~   37 (84)
                      ||.|.  .|++.|.....|..|++.|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  66666666666666666554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=8.4e-08  Score=35.28  Aligned_cols=27  Identities=33%  Similarity=0.658  Sum_probs=24.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|.....|..|++.|++++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            789999999999999999999988764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.47  E-value=1.9e-07  Score=35.28  Aligned_cols=27  Identities=22%  Similarity=0.421  Sum_probs=24.7

Q ss_pred             eeCC--CCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCP--HCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~--~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|.  .|++.|...+.|..|+++|++++
T Consensus         4 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            4 YSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            8898  89999999999999999998763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.46  E-value=1.5e-07  Score=34.26  Aligned_cols=24  Identities=13%  Similarity=0.423  Sum_probs=22.3

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.|..|++.|...+.|..|++.|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            4 FSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHCC
T ss_pred             ccCCCcChhhCCHHHHHHHHHHcc
Confidence            899999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=1.5e-07  Score=34.43  Aligned_cols=25  Identities=16%  Similarity=0.365  Sum_probs=23.0

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|..|++.|...+.|..|++.|++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHhcCC
Confidence            8999999999999999999988763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.45  E-value=1.5e-07  Score=35.34  Aligned_cols=27  Identities=15%  Similarity=0.369  Sum_probs=24.5

Q ss_pred             eeCC--CCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCP--HCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~--~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|.  .|++.|...+.|..|+++|++++
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            7887  89999999999999999998764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.4e-09  Score=49.08  Aligned_cols=36  Identities=11%  Similarity=0.090  Sum_probs=33.4

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCC
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHC   46 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C   46 (84)
                      +++|.|..|++.|.....|..|++.|.+.+ |.|..|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            679999999999999999999999999887 999887

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=1.2e-07  Score=34.58  Aligned_cols=24  Identities=21%  Similarity=0.654  Sum_probs=22.2

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.|..|++.|...+.|..|++.|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            4 YRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             EEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcC
Confidence            899999999999999999998763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=2.9e-08  Score=36.82  Aligned_cols=27  Identities=15%  Similarity=0.353  Sum_probs=24.5

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|...+.|..|++.|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            789999999999999999999987753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=2e-07  Score=34.57  Aligned_cols=27  Identities=15%  Similarity=0.137  Sum_probs=23.9

Q ss_pred             eeCCCCccccccchHHHHH-HhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTH-IERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H-~~~~~~~~   67 (84)
                      |.|..|++.|...+.|..| +..|.+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             cCCcccCcccCChHHHHHHHHHHccCCC
Confidence            7899999999999999999 67887753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.4e-08  Score=35.99  Aligned_cols=26  Identities=19%  Similarity=0.376  Sum_probs=24.1

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      |.|..|++.|...+.|..|++.|+++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            89999999999999999999998765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=33.84  Aligned_cols=24  Identities=25%  Similarity=0.596  Sum_probs=21.9

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.|..|++.|...+.|..|++.|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            889999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.15  E-value=1.5e-06  Score=31.73  Aligned_cols=25  Identities=20%  Similarity=0.380  Sum_probs=22.8

Q ss_pred             eeCC--CCccccccchHHHHHHhhhCC
Q psy10072         41 VKCP--HCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~--~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|.  .|++.|...+.|..|+++|++
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            7899  999999999999999998763

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.07  E-value=2e-05  Score=34.92  Aligned_cols=51  Identities=24%  Similarity=0.408  Sum_probs=40.8

Q ss_pred             eecCCCCccccChhhHHHHHH-hcCCc-------eeeCC--CCccccccchHHHHHHhhhC
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLR-IHQDL-------KVKCP--HCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~-~~~~~-------~~~c~--~C~~~f~~~~~l~~H~~~~~   64 (84)
                      ..+..|++.|.....|..|+. .|.+.       .|.|.  .|++.+.....|..|++..+
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            345689999999999999984 67542       27885  79998888889999998643

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=9.3e-07  Score=40.35  Aligned_cols=38  Identities=13%  Similarity=0.219  Sum_probs=32.3

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |..|+ .|.+++|+.|+.|++.|.. ..|..|+..+.+.+
T Consensus        32 L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           32 LKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             HHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             HHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            45788 8999999999999998874 78999999887654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.87  E-value=2.3e-06  Score=42.63  Aligned_cols=27  Identities=22%  Similarity=0.383  Sum_probs=18.1

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHH
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      |+|++||.|..|++.|.....|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            566666667777777766666666655

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.02  E-value=0.00016  Score=36.07  Aligned_cols=28  Identities=21%  Similarity=0.330  Sum_probs=24.1

Q ss_pred             hcCCce-eeCCCCccccccchHHHHHHhh
Q psy10072         35 IHQDLK-VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        35 ~~~~~~-~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      .++|.+ |.|..|++.|.+.+.|..|++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            355666 9999999999999999999864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.92  E-value=0.00085  Score=27.71  Aligned_cols=24  Identities=13%  Similarity=0.174  Sum_probs=20.1

Q ss_pred             CCeecCCCCccccChhhHHHHHHh
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRI   35 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~   35 (84)
                      .++.|+.|+..|.....|..|+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            567889999989888888888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.81  E-value=0.0016  Score=32.56  Aligned_cols=51  Identities=18%  Similarity=0.287  Sum_probs=40.1

Q ss_pred             CCCeecCCCCccccChhhHHHHHH--hc-------------------------------CCce-eeCCCCccccccchHH
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLR--IH-------------------------------QDLK-VKCPHCAYKCVKQKDL   56 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~--~~-------------------------------~~~~-~~c~~C~~~f~~~~~l   56 (84)
                      .+++.|..|+..|.....+..|..  .|                               .+.. |.|..|.+.|.....+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            367899999999999888887772  12                               1122 6799999999999999


Q ss_pred             HHHHh
Q psy10072         57 NTHIE   61 (84)
Q Consensus        57 ~~H~~   61 (84)
                      ..|..
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.81  E-value=0.0013  Score=27.20  Aligned_cols=26  Identities=19%  Similarity=0.300  Sum_probs=22.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +.|+.|++.|.....|..||..--++
T Consensus        13 ~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             eeCCcccccccchHHHHhhhhhcCcc
Confidence            89999999999999999999864443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.37  E-value=0.012  Score=30.58  Aligned_cols=57  Identities=16%  Similarity=0.232  Sum_probs=39.2

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      ..+..|+.|+..+ ....+..|....-... ..|..|+..+.. ..+..|...+.++.++
T Consensus       108 ~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          108 FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             ceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            3567899998877 4556888886555544 789999887764 4578998887776544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.22  E-value=0.0053  Score=26.92  Aligned_cols=35  Identities=20%  Similarity=0.657  Sum_probs=27.7

Q ss_pred             Chhhh-hhhcCCC------CeecC--CCCccccChhhHHHHHHh
Q psy10072          1 MRNHI-RTHTGEK------PYKCT--FCPFTAAHSSTMSYHLRI   35 (84)
Q Consensus         1 l~~h~-~~h~~~k------~~~c~--~C~~~f~~~~~l~~h~~~   35 (84)
                      |..|+ +.|.+.+      +|.|.  .|++.+.....|..|++.
T Consensus        19 l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A           19 LQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             HHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             HHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            35677 4787765      78886  999999888899999875

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.49  E-value=0.021  Score=21.93  Aligned_cols=24  Identities=29%  Similarity=0.538  Sum_probs=16.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.|+.|.+.+.....|..|-...|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            677777777777777777765443

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=95.15  E-value=0.03  Score=25.65  Aligned_cols=48  Identities=15%  Similarity=0.399  Sum_probs=35.5

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHh
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      .-|.|..|+.++.-+ .+..|...-.+.. |.|..|++.|... .+..|-.
T Consensus         9 V~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~~-~y~~Hts   57 (79)
T 1wjv_A            9 VFFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWGD-DYKSHVK   57 (79)
T ss_dssp             CEEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEGG-GTTTCCC
T ss_pred             eEEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCCC-CEeCEee
Confidence            458899999776544 6888976655644 9999999999853 4566643

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=95.04  E-value=0.02  Score=21.58  Aligned_cols=24  Identities=33%  Similarity=0.577  Sum_probs=17.5

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      ..|..|.+.|..-.+|..|++..+
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            567777777777777777777544

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=93.69  E-value=0.052  Score=25.38  Aligned_cols=27  Identities=19%  Similarity=0.329  Sum_probs=17.2

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCChh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDVL   70 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~~   70 (84)
                      ..|.+||+.|.   .|.+|+..+++..|..
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCHHH
Confidence            56777777766   3567777766555543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=93.62  E-value=0.088  Score=20.38  Aligned_cols=22  Identities=18%  Similarity=0.259  Sum_probs=12.6

Q ss_pred             CeecCCCCccccChhhHHHHHH
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      +..|..|+..|....++..|.+
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhe
Confidence            4556666666665555555554

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=93.54  E-value=0.07  Score=22.61  Aligned_cols=20  Identities=20%  Similarity=0.497  Sum_probs=16.9

Q ss_pred             eecCCCCccccChhhHHHHH
Q psy10072         14 YKCTFCPFTAAHSSTMSYHL   33 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~   33 (84)
                      -.|..|+..|.....++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            48999999998888888886

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=92.99  E-value=0.05  Score=26.33  Aligned_cols=12  Identities=42%  Similarity=0.908  Sum_probs=8.9

Q ss_pred             CCeecCCCCccc
Q psy10072         12 KPYKCTFCPFTA   23 (84)
Q Consensus        12 k~~~c~~C~~~f   23 (84)
                      .|+.|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            567777777777

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=92.36  E-value=0.11  Score=20.49  Aligned_cols=26  Identities=19%  Similarity=0.264  Sum_probs=18.7

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      -.+.|+.|++.+.. ....-|...|.+
T Consensus         8 ~~~~C~~C~~~i~~-~~~~EH~D~H~A   33 (39)
T 2i5o_A            8 DQVPCEKCGSLVPV-WDMPEHMDYHFA   33 (39)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHHHHHHH
T ss_pred             CCcccccccCcCCc-ccccchhhHHHH
Confidence            45789999988877 455777776653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=91.85  E-value=0.1  Score=26.00  Aligned_cols=27  Identities=15%  Similarity=0.310  Sum_probs=22.9

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHH
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      +.+...+.|..|+.+|.....+..|..
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            345667899999999999999998875

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=91.61  E-value=0.052  Score=24.99  Aligned_cols=38  Identities=24%  Similarity=0.440  Sum_probs=24.0

Q ss_pred             CeecCCCCccccChhhHHHHHHh-cC------C---------c-eeeCCCCccccc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRI-HQ------D---------L-KVKCPHCAYKCV   51 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~-~~------~---------~-~~~c~~C~~~f~   51 (84)
                      ...|+.||....+.. |...+.. -+      +         . .|+|+.|+..|-
T Consensus         8 ~~~~PlCG~~L~W~e-LIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFy   62 (95)
T 2k5c_A            8 MAKCPICGSPLKWEE-LIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFY   62 (95)
T ss_dssp             CEECSSSCCEECHHH-HHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEE
T ss_pred             cccCCcCCCccCHHH-HHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHh
Confidence            468999998876654 3333321 11      0         1 279999998774

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=91.12  E-value=0.066  Score=21.98  Aligned_cols=36  Identities=19%  Similarity=0.490  Sum_probs=20.6

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcC-CceeeCCCCccc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQ-DLKVKCPHCAYK   49 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~-~~~~~c~~C~~~   49 (84)
                      +.|.|..||..+.....-.  ..+.. ...|.|+.|+..
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~--t~f~~lP~dw~CP~Cg~~   39 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN--VPFDQLPDDWCCPVCGVS   39 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT--CCGGGSCTTCBCTTTCCB
T ss_pred             CEEECCCCCeEEeCCcCCC--cchhhCCCCCcCcCCCCc
Confidence            4689999998776432100  11111 112899999853

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=89.87  E-value=0.31  Score=17.77  Aligned_cols=21  Identities=29%  Similarity=0.754  Sum_probs=15.4

Q ss_pred             eeCCCCccccccchHHHHHHh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      +.|+.|.....+...+..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            778888877777777777743

>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}

Probab=89.73  E-value=0.075  Score=24.46  Aligned_cols=19  Identities=11%  Similarity=0.169  Sum_probs=12.1

Q ss_pred             hhhcCCCCeecCCCCccccC
Q psy10072          6 RTHTGEKPYKCTFCPFTAAH   25 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~   25 (84)
                      ..+.| ++.+|.+||..|..
T Consensus        50 ~l~~g-~~~RC~eCG~~fkL   68 (80)
T 2odx_A           50 KPTVN-EVARCWECGSVYKL   68 (80)
T ss_dssp             CCCTT-CEEECSSSCCEEEE
T ss_pred             EecCC-CCeECCCCCeEEEE
Confidence            34444 57777778777654

>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3

Probab=89.48  E-value=0.23  Score=23.10  Aligned_cols=42  Identities=17%  Similarity=0.301  Sum_probs=24.4

Q ss_pred             hcCCCCeecCCCCccccChhhHHHH------------HHhcCCceeeCCCCcccc
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYH------------LRIHQDLKVKCPHCAYKC   50 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h------------~~~~~~~~~~c~~C~~~f   50 (84)
                      ++.+..+.|..|++.|...- |.+-            .+.|+...|.|..|...+
T Consensus        24 ~t~~~l~pCRvC~RvfH~~C-L~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~   77 (89)
T 1wil_A           24 WTAESLFPCRVCTRVFHDGC-LRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNIN   77 (89)
T ss_dssp             CCSSCCSSCSSSSSCCCHHH-HHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCC
T ss_pred             ccccceeccccccccccHhh-cccccccccHHHHHHHHccCCCCCccccccchhh
Confidence            34566788999998886542 3321            111222338888886543

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=89.10  E-value=0.11  Score=24.12  Aligned_cols=30  Identities=23%  Similarity=0.471  Sum_probs=19.9

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCc-eeeCCCCccccc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDL-KVKCPHCAYKCV   51 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~-~~~c~~C~~~f~   51 (84)
                      ..|.|+.||.....          ..+. .|.|+.|+..|.
T Consensus        26 ~~y~Cp~CG~~~v~----------r~atGiW~C~~Cg~~~a   56 (83)
T 1vq8_Z           26 EDHACPNCGEDRVD----------RQGTGIWQCSYCDYKFT   56 (83)
T ss_dssp             SCEECSSSCCEEEE----------EEETTEEEETTTCCEEE
T ss_pred             ccCcCCCCCCccee----------ccCCCeEECCCCCCEec
Confidence            46899999974211          1122 399999998764

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=88.95  E-value=0.36  Score=25.78  Aligned_cols=36  Identities=19%  Similarity=0.485  Sum_probs=25.9

Q ss_pred             hHHHHHHhc--CCce------eeCCCCccccccchHHHHHHhhhC
Q psy10072         28 TMSYHLRIH--QDLK------VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        28 ~l~~h~~~~--~~~~------~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      .|..|++..  +|+.      |+|..|++ |-...++.+|++.|.
T Consensus       134 rlieHlK~~~~~GqDyvFWQFYKCe~CgK-YvDId~~~~Hlk~Hg  177 (226)
T 2czr_A          134 ALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  177 (226)
T ss_dssp             HHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHhccccCcceEEEEEEehhhcCc-eecHHHHHHHHHHcC
Confidence            467777643  3432      59999998 556778999998875

>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z

Probab=87.90  E-value=0.26  Score=24.28  Aligned_cols=30  Identities=20%  Similarity=0.411  Sum_probs=18.9

Q ss_pred             CCeecCCCCcc-ccChhhHHHHHHhcCCceeeCCCCccccc
Q psy10072         12 KPYKCTFCPFT-AAHSSTMSYHLRIHQDLKVKCPHCAYKCV   51 (84)
Q Consensus        12 k~~~c~~C~~~-f~~~~~l~~h~~~~~~~~~~c~~C~~~f~   51 (84)
                      ..|.|+.|++. +....         . ..|.|..|++.|.
T Consensus        59 akytCPfCGk~~vKR~a---------v-GIW~C~~Cgk~fA   89 (116)
T 3cc2_Z           59 EDHACPNCGEDRVDRQG---------T-GIWQCSYCDYKFT   89 (116)
T ss_dssp             SCEECSSSCCEEEEEEE---------T-TEEEETTTCCEEE
T ss_pred             cCCcCCCCCCceeEecC---------c-eeEECCCCCCEEE
Confidence            35888888862 22211         1 2389999998764

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=87.09  E-value=0.22  Score=22.20  Aligned_cols=48  Identities=19%  Similarity=0.445  Sum_probs=30.9

Q ss_pred             CCCeec-CCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHH
Q psy10072         11 EKPYKC-TFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHI   60 (84)
Q Consensus        11 ~k~~~c-~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~   60 (84)
                      ..+..| ..|+..+... .+..|+...-... ..|..|+..+... .|..|.
T Consensus        14 ~~~v~C~~~C~~~v~r~-~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H~   63 (76)
T 2yuc_A           14 FNVIPCPNRCPMKLSRR-DLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESHE   63 (76)
T ss_dssp             CSCCBCTTCCSCBCCSS-SSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHTT
T ss_pred             CcccCCCccccHHhhHh-HHHhhCHhhCCCcceECCCCCCccCHH-HHHHHH
Confidence            356678 5788776554 5666665333333 7899998877644 467775

>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...

Probab=86.99  E-value=0.16  Score=24.32  Aligned_cols=20  Identities=25%  Similarity=0.458  Sum_probs=13.5

Q ss_pred             hhhhcCCCCeecCCCCccccC
Q psy10072          5 IRTHTGEKPYKCTFCPFTAAH   25 (84)
Q Consensus         5 ~~~h~~~k~~~c~~C~~~f~~   25 (84)
                      +..+.|+ |.+|++||..|..
T Consensus        72 ~~l~~g~-~~RC~eCG~~fkL   91 (98)
T 1v54_F           72 FWLHKGE-AQRCPSCGTHYKL   91 (98)
T ss_dssp             EEEESSS-CEECTTTCCEEEE
T ss_pred             EEEeCCC-ceECCCCCeEEEE
Confidence            3345554 8888888887754

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=86.47  E-value=0.37  Score=23.66  Aligned_cols=27  Identities=22%  Similarity=0.495  Sum_probs=18.2

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCcee-eCCCCccc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLKV-KCPHCAYK   49 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~-~c~~C~~~   49 (84)
                      ..|.|..||..|...           ...+ .|+.|+..
T Consensus        72 ~~~~C~~CG~~~e~~-----------~~~~~~CP~Cgs~   99 (119)
T 2kdx_A           72 VELECKDCSHVFKPN-----------ALDYGVCEKCHSK   99 (119)
T ss_dssp             CEEECSSSSCEECSC-----------CSTTCCCSSSSSC
T ss_pred             ceEEcCCCCCEEeCC-----------CCCCCcCccccCC
Confidence            358899999887652           1126 78888754

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=84.91  E-value=0.47  Score=25.55  Aligned_cols=26  Identities=27%  Similarity=0.554  Sum_probs=17.6

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      ...|.|..||..+..            ..++.|+.|+.
T Consensus       169 ~~~~~C~~CG~i~~g------------~~p~~CP~C~~  194 (202)
T 1yuz_A          169 DKFHLCPICGYIHKG------------EDFEKCPICFR  194 (202)
T ss_dssp             CCEEECSSSCCEEES------------SCCSBCTTTCC
T ss_pred             CcEEEECCCCCEEcC------------cCCCCCCCCCC
Confidence            346889999876541            12278888875

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=84.83  E-value=0.72  Score=25.01  Aligned_cols=22  Identities=27%  Similarity=0.389  Sum_probs=11.7

Q ss_pred             CeecCCCCccccC-hhhHHHHHH
Q psy10072         13 PYKCTFCPFTAAH-SSTMSYHLR   34 (84)
Q Consensus        13 ~~~c~~C~~~f~~-~~~l~~h~~   34 (84)
                      |..|..|+..|.+ -..|..|+.
T Consensus       169 ~L~C~~C~~~f~n~~~~LK~HL~  191 (204)
T 3sp4_A          169 DLKCWRCGETFGRHFTKLKAHLQ  191 (204)
T ss_dssp             CCBCTTTCCBCTTCHHHHHHHHH
T ss_pred             CceeCCCCchhhcccHHHHHHHH
Confidence            4555555555554 455555544

>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}

Probab=83.74  E-value=0.49  Score=24.47  Aligned_cols=26  Identities=27%  Similarity=0.501  Sum_probs=18.4

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCce-eeCCCCcccc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKC   50 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f   50 (84)
                      .|.|..|++.|...            .+ ..|+.||...
T Consensus       132 ~y~C~~Cg~~~~~~------------~~~~~Cp~CG~~~  158 (165)
T 2lcq_A          132 RYVCIGCGRKFSTL------------PPGGVCPDCGSKV  158 (165)
T ss_dssp             CEEESSSCCEESSC------------CGGGBCTTTCCBE
T ss_pred             EEECCCCCCcccCC------------CCCCcCCCCCCcc
Confidence            58899999888643            22 4788888653

>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}

Probab=83.69  E-value=0.28  Score=24.66  Aligned_cols=19  Identities=21%  Similarity=0.422  Sum_probs=13.0

Q ss_pred             hhhcCCCCeecCCCCccccC
Q psy10072          6 RTHTGEKPYKCTFCPFTAAH   25 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~   25 (84)
                      ..+.| +|.+|++||..|..
T Consensus       104 ~L~kg-~p~RCpeCG~~fkL  122 (129)
T 2y69_F          104 WLHKG-EAQRCPSCGTHYKL  122 (129)
T ss_dssp             EEESS-SCEECTTTCCEEEE
T ss_pred             EEeCC-CceeCCCCCeEEEE
Confidence            34455 48888888887754

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=83.66  E-value=0.62  Score=20.82  Aligned_cols=27  Identities=26%  Similarity=0.555  Sum_probs=15.4

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      ..|.|..|+..|...          .+....|+.|+.
T Consensus        27 v~Y~C~~CG~~~e~~----------~~d~irCp~CG~   53 (70)
T 1twf_L           27 LKYICAECSSKLSLS----------RTDAVRCKDCGH   53 (70)
T ss_dssp             CCEECSSSCCEECCC----------TTSTTCCSSSCC
T ss_pred             EEEECCCCCCcceeC----------CCCCccCCCCCc
Confidence            346777777766443          112246777765

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.63  E-value=0.86  Score=20.71  Aligned_cols=25  Identities=20%  Similarity=0.417  Sum_probs=18.4

Q ss_pred             eeCCCCccccc-------cchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCV-------KQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~-------~~~~l~~H~~~~~~   65 (84)
                      -.|..|++.+.       -.++|.+|+...|.
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~   60 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHR   60 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCH
Confidence            57888887775       36789999876554

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=82.61  E-value=1.2  Score=22.07  Aligned_cols=25  Identities=16%  Similarity=0.339  Sum_probs=18.9

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      ..|..|...|.....+..|++..|+
T Consensus        16 ~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           16 TPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             eeEecCCCcccCHHHHHHHHHHhcC
Confidence            6788888888777778888776554

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=82.20  E-value=0.81  Score=24.00  Aligned_cols=25  Identities=36%  Similarity=0.851  Sum_probs=15.9

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCceeeCCCCcc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAY   48 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~   48 (84)
                      ..|.|+.||..+..            ..+-.|+.|+.
T Consensus       137 ~~~~C~~CG~i~~~------------~~p~~CP~Cg~  161 (170)
T 3pwf_A          137 KVYICPICGYTAVD------------EAPEYCPVCGA  161 (170)
T ss_dssp             CEEECTTTCCEEES------------CCCSBCTTTCC
T ss_pred             CeeEeCCCCCeeCC------------CCCCCCCCCCC
Confidence            45888888876641            12247888874

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=81.21  E-value=1.9  Score=19.40  Aligned_cols=30  Identities=20%  Similarity=0.548  Sum_probs=19.6

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      ..|.|+.|++.- .        . -.+.- |.|..|++.|.
T Consensus        25 ~ky~C~fCgk~~-v--------k-R~a~GIW~C~~C~~~~A   55 (72)
T 3jyw_9           25 ARYDCSFCGKKT-V--------K-RGAAGIWTCSCCKKTVA   55 (72)
T ss_dssp             SCBCCSSCCSSC-B--------S-BCSSSCBCCSSSCCCCC
T ss_pred             cCccCCCCCCce-e--------E-ecCCCeEECCCCCCEEe
Confidence            458899998652 1        1 11223 89999998774

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=81.08  E-value=1.9  Score=18.88  Aligned_cols=29  Identities=17%  Similarity=0.461  Sum_probs=20.1

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCceeeCCCCccc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLKVKCPHCAYK   49 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~c~~C~~~   49 (84)
                      ...|.|..|+..+...          .+....|+.|+..
T Consensus        19 ~v~Y~C~~Cg~~~~l~----------~~~~iRC~~CG~R   47 (63)
T 3h0g_L           19 TMIYLCADCGARNTIQ----------AKEVIRCRECGHR   47 (63)
T ss_dssp             CCCCBCSSSCCBCCCC----------SSSCCCCSSSCCC
T ss_pred             CeEEECCCCCCeeecC----------CCCceECCCCCcE
Confidence            3568999999887643          1233789999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	84
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	3e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-04
d2dmda1	28	g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {	7e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 7e-08
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD 38
          RTHTGEKPY C+ C  T      +  H + + D
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 4e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
            R  TG KP++C  C  + + S  ++ H + H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (91), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 4  HIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
                  + YKC  C  + +HSS +S H R H
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 1e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 8  HTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          H+GEKPY C  C    + SS +  H R+H
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 2e-06
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 6  RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH 36
          RTH+GEKPY+C  C      S TM  H+   
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 1e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 8  HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD 38
           +G++P+ C  C       +  + HL++H D
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 19/26 (73%)

Query: 11 EKPYKCTFCPFTAAHSSTMSYHLRIH 36
          E+P+KC  CP+ + +SS ++ HLR H
Sbjct: 1  ERPFKCQICPYASRNSSQLTVHLRSH 26

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 4e-04
 Identities = 5/18 (27%), Positives = 11/18 (61%)

Query: 1  MRNHIRTHTGEKPYKCTF 18
          ++ H++ H+  + Y C F
Sbjct: 19 LKEHMKLHSDTRDYICEF 36

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (72), Expect = 7e-04
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 12 KPYKCTFCPFTAAHSSTMSYHLRIHQD 38
          KPYKC  C + AA SS+++ HLRIH D
Sbjct: 2  KPYKCKTCDYAAADSSSLNKHLRIHSD 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.4 bits (72), Expect = 8e-04
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 11 EKPYKCTFCPFTAAHSSTMSYHLRIH 36
          +KP++C  C    + S  ++ H+R H
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.0 bits (68), Expect = 0.004
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 12 KPYKCTFCPFTAAHSSTMSYHLRIH 36
          K + C  CP     S  +S H++ H
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTH 25

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	84
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.82
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.67
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.64
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.6
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.6
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.5
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.49
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.46
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.41
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.4
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.39
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.39
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.34
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.33
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.27
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.23
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.19
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.13
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.08
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.05
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.02
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.96
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.91
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.91
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.89
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.89
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.84
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.74
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.69
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.59
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.56
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.51
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.36
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.33
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.3
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.29
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.13
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.1
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.08
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.0
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.89
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.87
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.79
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.71
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.71
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.71
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.67
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.67
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.65
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.63
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.61
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.56
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.54
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.46
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.42
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.38
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.21
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.19
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.17
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.0
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.92
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.89
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.58
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.53
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.48
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.48
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.42
d1y0jb1	36	U-shaped transcription factor, different fingers {	96.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.14
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.08
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.79
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.77
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.6
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.26
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.75
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.45
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.36
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.29
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	94.19
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	93.12
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.74
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	89.56
d1fu9a_	36	U-shaped transcription factor, different fingers {	89.3
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.85
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.72
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	86.97
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.79
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	86.35
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	83.68
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	81.5

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.9e-20  Score=80.38  Aligned_cols=52  Identities=27%  Similarity=0.512  Sum_probs=49.6

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccccchHHHHHHhhh
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      ||||.| +||+.|.....|..|++.|++.+ |.|..|++.|.+.+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 59999999999999999999998 99999999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-17  Score=66.50  Aligned_cols=37  Identities=30%  Similarity=0.435  Sum_probs=35.0

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +|+++|++++||.|.+||+.|...++|..|++.|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6999999999999999999999999999999999874

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=9.2e-17  Score=63.58  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=33.4

Q ss_pred             hhhhhhcCCCCeecCCCCccccChhhHHHHHHhcCC
Q psy10072          3 NHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus         3 ~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      .|+|+|+|+|||.|.+|++.|...+.|..|++.|.+
T Consensus         1 gh~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            388999999999999999999999999999998864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.5e-16  Score=61.48  Aligned_cols=35  Identities=40%  Similarity=0.742  Sum_probs=31.6

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhcCCce
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      |+|+|++||.|.+|++.|...+.|..|++.|.+..
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            68999999999999999999999999999887653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.4e-16  Score=59.83  Aligned_cols=33  Identities=39%  Similarity=0.689  Sum_probs=30.1

Q ss_pred             hhcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          7 THTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         7 ~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +|+|+|||.|.+|++.|...+.|..|++.|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=1.1e-14  Score=56.57  Aligned_cols=32  Identities=25%  Similarity=0.681  Sum_probs=28.2

Q ss_pred             hcCCCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072          8 HTGEKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus         8 h~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |+|++||.|.+|++.|....+|..|++.|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999888754

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=9.8e-15  Score=57.20  Aligned_cols=31  Identities=45%  Similarity=0.831  Sum_probs=27.5

Q ss_pred             hhhcCCCCeecCCCCccccChhhHHHHHHhc
Q psy10072          6 RTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus         6 ~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      |+|+|++||.|+.|++.|..+.+|..|++.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            5799999999999999999999999997643

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.1e-14  Score=62.02  Aligned_cols=36  Identities=28%  Similarity=0.589  Sum_probs=33.8

Q ss_pred             ChhhhhhhcCCCCeecCCCCccccChhhHHHHHHhc
Q psy10072          1 MRNHIRTHTGEKPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus         1 l~~h~~~h~~~k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      |..|+++|+|++||.|.+|++.|...+.|..|++.|
T Consensus        18 l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          18 RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             HHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             hHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            578999999999999999999999999999999865

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.3e-14  Score=57.67  Aligned_cols=32  Identities=19%  Similarity=0.272  Sum_probs=20.3

Q ss_pred             eeCCCCccccccchHHHHHHh-hhCCCCChhhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIE-RRHMPGDVLGH   72 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~   72 (84)
                      |+|..|++.|.+.++|..|++ +|++++||.|+
T Consensus         6 y~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             ccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            666666666666666666654 46666666664

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.3e-13  Score=54.70  Aligned_cols=36  Identities=25%  Similarity=0.536  Sum_probs=32.5

Q ss_pred             CCCCeecCCCCccccChhhHHHHHH-hcCCce-eeCCC
Q psy10072         10 GEKPYKCTFCPFTAAHSSTMSYHLR-IHQDLK-VKCPH   45 (84)
Q Consensus        10 ~~k~~~c~~C~~~f~~~~~l~~h~~-~~~~~~-~~c~~   45 (84)
                      .+|||.|.+||+.|....+|..|++ .|++++ |+|..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            5799999999999999999999986 699988 99863

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=5.2e-14  Score=58.14  Aligned_cols=38  Identities=18%  Similarity=0.459  Sum_probs=29.8

Q ss_pred             hhhhhhhcCCCCeecCC--CCccccChhhHHHHHHhcCCce
Q psy10072          2 RNHIRTHTGEKPYKCTF--CPFTAAHSSTMSYHLRIHQDLK   40 (84)
Q Consensus         2 ~~h~~~h~~~k~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   40 (84)
                      ..|+ .|+|++||.|..  |++.|...+.|..|++.|+|++
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4455 488888888866  8888888888888888888753

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=9e-14  Score=51.34  Aligned_cols=28  Identities=29%  Similarity=0.726  Sum_probs=21.7

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ||||.|.+|++.|..++.|..|++.|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5778888888888888888888877764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2e-14  Score=57.06  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=32.8

Q ss_pred             HHHHhcCCce-eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         31 YHLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        31 ~h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +|++.|++.+ |.|..|++.|.+.++|..|+++|++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3667889888 99999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.34  E-value=5.3e-13  Score=49.70  Aligned_cols=28  Identities=21%  Similarity=0.515  Sum_probs=17.9

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +||.|++|++.|...+.|..|++.|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4666666666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5.7e-13  Score=49.58  Aligned_cols=28  Identities=32%  Similarity=0.634  Sum_probs=17.5

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |||.|.+|++.|...+.|..|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4566666666666666666666666654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=7.7e-13  Score=50.59  Aligned_cols=31  Identities=19%  Similarity=0.239  Sum_probs=29.1

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      |++.+ |+|..|++.|.+.+.|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            77888 99999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=4.9e-13  Score=48.26  Aligned_cols=25  Identities=44%  Similarity=0.747  Sum_probs=18.8

Q ss_pred             CCeecCCCCccccChhhHHHHHHhc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      |||.|.+||+.|...+.|.+|++.|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5777777777777777777777765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2.3e-12  Score=50.35  Aligned_cols=34  Identities=32%  Similarity=0.604  Sum_probs=30.6

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +.|+|++ |+|..|++.|.+.+.|..|+++|+.+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            4688888 999999999999999999999998753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.23  E-value=3.5e-12  Score=47.44  Aligned_cols=28  Identities=18%  Similarity=0.362  Sum_probs=26.3

Q ss_pred             eeeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +|.|..|++.|.+.+.|..|+++|++|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            4899999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.1e-12  Score=50.31  Aligned_cols=32  Identities=22%  Similarity=0.438  Sum_probs=26.0

Q ss_pred             eeCCC--CccccccchHHHHHHhhhCCCCChhhh
Q psy10072         41 VKCPH--CAYKCVKQKDLNTHIERRHMPGDVLGH   72 (84)
Q Consensus        41 ~~c~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~   72 (84)
                      |.|+.  |++.|.+...|.+|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56655  888888888888888888888888875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.9e-12  Score=50.88  Aligned_cols=34  Identities=24%  Similarity=0.503  Sum_probs=30.6

Q ss_pred             HHHhcCCce-eeCCCCccccccchHHHHHHhhhCC
Q psy10072         32 HLRIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        32 h~~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.+.|++++ |+|..|++.|.+.++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            457899988 9999999999999999999998854

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=5.2e-12  Score=46.90  Aligned_cols=28  Identities=25%  Similarity=0.635  Sum_probs=26.2

Q ss_pred             eeeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +|.|..|++.|.+.+.|..|+++|++++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            3899999999999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=1.2e-11  Score=47.80  Aligned_cols=31  Identities=10%  Similarity=0.233  Sum_probs=28.2

Q ss_pred             cCCce-eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         36 HQDLK-VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        36 ~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      ++|++ |+|..|++.|.+.++|..|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777 99999999999999999999999864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.3e-11  Score=45.37  Aligned_cols=26  Identities=23%  Similarity=0.452  Sum_probs=24.4

Q ss_pred             eeeCCCCccccccchHHHHHHhhhCC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      +|+|..|++.|.+.++|..|+++|+|
T Consensus         3 Py~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           3 PFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCcCEecccccccccCCCccC
Confidence            49999999999999999999999975

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.2e-11  Score=47.45  Aligned_cols=33  Identities=24%  Similarity=0.480  Sum_probs=28.5

Q ss_pred             HhcCCce-eeCCCCccccccchHHHHHHhhhCCC
Q psy10072         34 RIHQDLK-VKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        34 ~~~~~~~-~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      ++|+|++ |+|..|++.|.+.++|..|+..++.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3688888 99999999999999999998765543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=6.2e-11  Score=44.19  Aligned_cols=27  Identities=41%  Similarity=0.737  Sum_probs=18.4

Q ss_pred             CCeecCC--CCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~~~~~~   38 (84)
                      |||.|+.  |++.|..++.|..|++.|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            4666765  77777777777777776665

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.9e-11  Score=43.50  Aligned_cols=25  Identities=20%  Similarity=0.339  Sum_probs=23.2

Q ss_pred             eeeCCCCccccccchHHHHHHhhhC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      +|+|.+||+.|.+.+.|..|+++|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            4899999999999999999999874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=8.3e-12  Score=51.39  Aligned_cols=39  Identities=13%  Similarity=0.309  Sum_probs=33.0

Q ss_pred             hHHHHHHhcCCce-eeCCC--CccccccchHHHHHHhhhCCCC
Q psy10072         28 TMSYHLRIHQDLK-VKCPH--CAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        28 ~l~~h~~~~~~~~-~~c~~--C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      .+..|+. |.+.+ |.|..  |++.|...++|..|+++|++++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555654 77777 99977  9999999999999999999975

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=8.6e-11  Score=43.83  Aligned_cols=27  Identities=37%  Similarity=0.780  Sum_probs=15.4

Q ss_pred             CCeecCC--CCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~~~~~~   38 (84)
                      |||.|+.  |++.|...+.|..|++.|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4555544  66666666666666555554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.6e-10  Score=43.38  Aligned_cols=28  Identities=29%  Similarity=0.637  Sum_probs=16.3

Q ss_pred             CCeecC--CCCccccChhhHHHHHHhcCCc
Q psy10072         12 KPYKCT--FCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        12 k~~~c~--~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            355563  4666666666666666666554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=4.4e-10  Score=42.40  Aligned_cols=28  Identities=25%  Similarity=0.654  Sum_probs=20.7

Q ss_pred             CCCeecCC--CCccccChhhHHHHHHhcCC
Q psy10072         11 EKPYKCTF--CPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        11 ~k~~~c~~--C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ++||.|..  |++.|...+.|..|++.|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  77777777777777777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=4.3e-10  Score=41.84  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=24.8

Q ss_pred             eeeCCC--CccccccchHHHHHHhhhCCC
Q psy10072         40 KVKCPH--CAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        40 ~~~c~~--C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +|.|..  |++.|.+.++|..|+++|++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            388988  999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=2.3e-10  Score=42.23  Aligned_cols=27  Identities=33%  Similarity=0.810  Sum_probs=17.5

Q ss_pred             CCeecCC--CCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~~~~~~   38 (84)
                      |||.|..  |++.|...+.|..|++.|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666655  66777666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=5.1e-10  Score=41.67  Aligned_cols=27  Identities=19%  Similarity=0.384  Sum_probs=24.6

Q ss_pred             eeeCCC--CccccccchHHHHHHhhhCCC
Q psy10072         40 KVKCPH--CAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        40 ~~~c~~--C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +|.|..  |++.|.+.++|..|+++|++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            388976  999999999999999999885

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.6e-10  Score=43.50  Aligned_cols=31  Identities=19%  Similarity=0.568  Sum_probs=28.3

Q ss_pred             eecCC--CCccccChhhHHHHHHhcCCce-eeCC
Q psy10072         14 YKCTF--CPFTAAHSSTMSYHLRIHQDLK-VKCP   44 (84)
Q Consensus        14 ~~c~~--C~~~f~~~~~l~~h~~~~~~~~-~~c~   44 (84)
                      |.|+.  |++.|.....|..|++.|++++ |+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67765  9999999999999999999988 9986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.2e-09  Score=40.93  Aligned_cols=28  Identities=14%  Similarity=0.349  Sum_probs=25.0

Q ss_pred             eeeCC--CCccccccchHHHHHHhhhCCCC
Q psy10072         40 KVKCP--HCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        40 ~~~c~--~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      +|.|+  .|++.|.+.++|..|+++|++++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            37884  69999999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=9.8e-10  Score=40.13  Aligned_cols=26  Identities=35%  Similarity=0.778  Sum_probs=18.6

Q ss_pred             CCeecCC--CCccccChhhHHHHHHhcC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~~~~~   37 (84)
                      +||.|+.  |++.|...++|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677765  7777777777777777663

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=5.5e-09  Score=37.06  Aligned_cols=27  Identities=37%  Similarity=0.668  Sum_probs=19.6

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcC
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      ++||.|..||+.|..+....+|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777776653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=6.9e-09  Score=38.16  Aligned_cols=29  Identities=21%  Similarity=0.187  Sum_probs=26.1

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCCCh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPGDV   69 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~~~   69 (84)
                      ..|..||+.|+....|.+|.-.|.+|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            68899999999999999998889999987

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=6.8e-09  Score=35.73  Aligned_cols=23  Identities=26%  Similarity=0.537  Sum_probs=11.2

Q ss_pred             eCCCCccccccchHHHHHHhhhC
Q psy10072         42 KCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        42 ~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      +|+.|++.|+..+.|..|++.|+
T Consensus         3 kc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             ccchhhhHhcchhHHHHHhhccC
Confidence            34445555555555555544443

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=2.2e-08  Score=35.98  Aligned_cols=29  Identities=41%  Similarity=0.849  Sum_probs=23.9

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      ++||.|+.|...|..+.-...|++.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57888999988888888888888887763

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=1.4e-08  Score=37.34  Aligned_cols=26  Identities=27%  Similarity=0.534  Sum_probs=23.3

Q ss_pred             eeeCCC--CccccccchHHHHHHhhhCC
Q psy10072         40 KVKCPH--CAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        40 ~~~c~~--C~~~f~~~~~l~~H~~~~~~   65 (84)
                      +|.|..  |++.|...++|.+|+++|++
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            388977  99999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.2e-08  Score=34.43  Aligned_cols=26  Identities=27%  Similarity=0.588  Sum_probs=24.0

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      |+.|+.|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=4e-08  Score=36.85  Aligned_cols=27  Identities=26%  Similarity=0.498  Sum_probs=24.2

Q ss_pred             eeeCCC--CccccccchHHHHHHhhhCCC
Q psy10072         40 KVKCPH--CAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        40 ~~~c~~--C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +|.|..  |++.|.+.++|.+|+++|+..
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            388977  999999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2e-08  Score=36.56  Aligned_cols=25  Identities=28%  Similarity=0.591  Sum_probs=22.2

Q ss_pred             eeeCCC--CccccccchHHHHHHhhhC
Q psy10072         40 KVKCPH--CAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        40 ~~~c~~--C~~~f~~~~~l~~H~~~~~   64 (84)
                      +|.|..  |++.|.+.++|.+|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            378876  9999999999999999885

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=2.5e-07  Score=32.33  Aligned_cols=24  Identities=21%  Similarity=0.353  Sum_probs=13.4

Q ss_pred             eCCCCccccccchHHHHHHhhhCC
Q psy10072         42 KCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        42 ~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      .|.+|++.|...+.|++|+-+|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=2.6e-07  Score=33.07  Aligned_cols=26  Identities=27%  Similarity=0.655  Sum_probs=18.6

Q ss_pred             CCeecCC--CCccccChhhHHHHHHhcC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~~~~~   37 (84)
                      |||.|..  |++.+..+++|.+|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5777765  7777777777777777543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=3.3e-07  Score=32.17  Aligned_cols=27  Identities=41%  Similarity=1.038  Sum_probs=15.3

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      +||.|..|...-..++.|..|.+.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666665555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=3.5e-07  Score=31.93  Aligned_cols=27  Identities=22%  Similarity=0.274  Sum_probs=24.1

Q ss_pred             CeecCCCCccccChhhHHHHHHhcCCc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      .+.|.+||+.|..++.|.+|+..|++.
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            368999999999999999999988864

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.8e-07  Score=31.90  Aligned_cols=26  Identities=35%  Similarity=0.701  Sum_probs=15.9

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      |.|+.|+....-++.|.+|++.|++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45666666666666666666666553

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=8e-07  Score=31.37  Aligned_cols=25  Identities=16%  Similarity=0.372  Sum_probs=22.8

Q ss_pred             eeeCCCCccccccchHHHHHHhhhC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      +|.|..|++.|.......+|..+|.
T Consensus         3 Pf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           3 PFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             Ccccchhhhhhhcchhhhhhhhhcc
Confidence            4999999999999999999988874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=8.2e-07  Score=31.29  Aligned_cols=27  Identities=22%  Similarity=0.380  Sum_probs=24.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|+.|+....-++.|..|++.|+++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            689999999999999999999999863

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.6e-06  Score=33.45  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=18.1

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHH
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      +|-|||.|..|++.|-+..++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            45677777777777777777766654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=9.5e-07  Score=32.33  Aligned_cols=30  Identities=20%  Similarity=0.242  Sum_probs=26.9

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCCce-e
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQDLK-V   41 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~   41 (84)
                      +...|..||+.|.....|.+|...|.+++ |
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            56789999999999999999999999876 5

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=1.6e-06  Score=29.82  Aligned_cols=25  Identities=20%  Similarity=0.283  Sum_probs=13.3

Q ss_pred             ecCCCCccccChhhHHHHHHhcCCc
Q psy10072         15 KCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        15 ~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +|+.|.+.|..+..|..|.+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=2.3e-06  Score=29.38  Aligned_cols=27  Identities=26%  Similarity=0.485  Sum_probs=24.0

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      .+|+.|.+.|.+...|+.|.+.|++++
T Consensus         1 vqcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           1 VECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             CcCcchHHHHHHhHhhhhccccccCCC
Confidence            058999999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=3.1e-06  Score=29.39  Aligned_cols=25  Identities=60%  Similarity=1.133  Sum_probs=15.0

Q ss_pred             CCeecCCCCccccChhhHHHHHHhc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      +|+.|..|...-...+.|.+|++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5666666666555566666666554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.00  E-value=2.7e-06  Score=28.77  Aligned_cols=23  Identities=26%  Similarity=0.476  Sum_probs=15.6

Q ss_pred             eeCCCCccccccchHHHHHHhhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~   63 (84)
                      |+|..|.+.|-..+.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666777777777777776665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.5e-06  Score=30.76  Aligned_cols=27  Identities=33%  Similarity=0.682  Sum_probs=20.3

Q ss_pred             CCeecCC--CCccccChhhHHHHH-HhcCC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHL-RIHQD   38 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~-~~~~~   38 (84)
                      +||.|..  |.+.|+..++..+|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5788876  888888888888886 66643

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=7.1e-06  Score=28.68  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=24.5

Q ss_pred             eeeCCCCccccccchHHHHHHhhhCCC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~~~   66 (84)
                      +|+|..|....+..+.|..|++.|++.
T Consensus         3 pfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             cceeeecccccCCchheEEeeecccCc
Confidence            499999999999999999999999873

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.89  E-value=8.4e-06  Score=31.06  Aligned_cols=24  Identities=25%  Similarity=0.724  Sum_probs=11.7

Q ss_pred             CeecCCCCccccChhhHHHHHHhc
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      .|.|..|++.|.+...|-.|++.|
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTT
T ss_pred             ccCCCCCCCccCCcccccchHhhh
Confidence            344555555555544444454444

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=6e-06  Score=29.03  Aligned_cols=23  Identities=30%  Similarity=0.928  Sum_probs=17.4

Q ss_pred             CeecCCCCccccChhhHHHHHHh
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRI   35 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~   35 (84)
                      ||.|..|...|.++.+|.+|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57777787777777777777764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=1.6e-05  Score=28.03  Aligned_cols=22  Identities=27%  Similarity=0.762  Sum_probs=10.5

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |+|..|.......++|+.|+.+
T Consensus         3 y~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHH
T ss_pred             ccccccccccccchhhhhhhhc
Confidence            4444444444444455555443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.71  E-value=1.9e-05  Score=30.04  Aligned_cols=27  Identities=15%  Similarity=0.348  Sum_probs=24.7

Q ss_pred             eeCCCCccccccchHHHHHHhhhCCCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHMPG   67 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~~~   67 (84)
                      |.|..|++.|.....|--|++.|..++
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             cCCCCCCCccCCcccccchHhhhcchH
Confidence            999999999999999999999987654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1.3e-05  Score=27.01  Aligned_cols=24  Identities=38%  Similarity=0.787  Sum_probs=21.6

Q ss_pred             eecCCCCccccChhhHHHHHHhcC
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      |.|..|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999998764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=28.77  Aligned_cols=26  Identities=15%  Similarity=0.522  Sum_probs=23.6

Q ss_pred             eeeCCCCccccccchHHHHHHhhhCC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      +|.|+.|...|...+.+.-|.+.|.+
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CcccchHHHHhhccccceEeeecccC
Confidence            38999999999999999999998865

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.67  E-value=2.8e-05  Score=27.20  Aligned_cols=24  Identities=29%  Similarity=0.706  Sum_probs=13.3

Q ss_pred             CeecCC--CCccccChhhHHHHHHhc
Q psy10072         13 PYKCTF--CPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        13 ~~~c~~--C~~~f~~~~~l~~h~~~~   36 (84)
                      ||.|+.  |++.|..++-|.+|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555543  666666666666555443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=2.8e-05  Score=27.24  Aligned_cols=25  Identities=16%  Similarity=0.371  Sum_probs=14.6

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|..|...|+..-.|..|+-.|++
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            5556666666655556666555554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.65  E-value=2.4e-05  Score=27.51  Aligned_cols=27  Identities=22%  Similarity=0.431  Sum_probs=17.4

Q ss_pred             CCeecCC--CCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTF--CPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~--C~~~f~~~~~l~~h~~~~~~   38 (84)
                      +||.|.+  |.+.|.....|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            4666654  77777777667777666654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=3e-05  Score=27.59  Aligned_cols=25  Identities=20%  Similarity=0.458  Sum_probs=21.4

Q ss_pred             eeCCC--CccccccchHHHHHHhhhCC
Q psy10072         41 VKCPH--CAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~--C~~~f~~~~~l~~H~~~~~~   65 (84)
                      |.|..  |++.|...++|..|++.+++
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            77765  99999999999999987654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=3.5e-05  Score=26.66  Aligned_cols=25  Identities=28%  Similarity=0.636  Sum_probs=22.7

Q ss_pred             eeeCCCCccccccchHHHHHHhhhC
Q psy10072         40 KVKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        40 ~~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      +++|..|+..-...++|..|+++|.
T Consensus         3 p~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CcccccccchhcchhhHhhhhhccc
Confidence            3899999999999999999999874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=7.5e-05  Score=26.11  Aligned_cols=29  Identities=21%  Similarity=0.442  Sum_probs=26.1

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCCc
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQDL   39 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~~   39 (84)
                      +..|.|..|...|...-.|..|+..|+|.
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.54  E-value=4.1e-05  Score=27.48  Aligned_cols=21  Identities=19%  Similarity=0.368  Sum_probs=11.1

Q ss_pred             eeCCCCccccccchHHHHHHh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      |.|..|++.|...+-+.+|++
T Consensus         2 f~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHT
T ss_pred             cccccccchhhHHHHHHHHHH
Confidence            445555555555555555544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=7.3e-05  Score=26.30  Aligned_cols=25  Identities=36%  Similarity=0.910  Sum_probs=22.7

Q ss_pred             CCeecCCCCccccChhhHHHHHHhc
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      +||.|..|......+++|..|+.+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            6899999999999999999999863

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=7.3e-05  Score=28.69  Aligned_cols=24  Identities=21%  Similarity=0.569  Sum_probs=21.0

Q ss_pred             Cce-eeCCCCccccccchHHHHHHh
Q psy10072         38 DLK-VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        38 ~~~-~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      |.+ |.|..|++.|.+.+++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            455 999999999999999999854

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.38  E-value=9.2e-05  Score=26.55  Aligned_cols=22  Identities=23%  Similarity=0.585  Sum_probs=20.0

Q ss_pred             CeecCCCCccccChhhHHHHHH
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      ||.|..|++.|....-+.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            7999999999999998888875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00012  Score=27.70  Aligned_cols=27  Identities=22%  Similarity=0.509  Sum_probs=18.2

Q ss_pred             CCCCeec--CCCCccccChhhHHHHHHhc
Q psy10072         10 GEKPYKC--TFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        10 ~~k~~~c--~~C~~~f~~~~~l~~h~~~~   36 (84)
                      .+|||.|  +-|+..|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3677777  45777777777777666544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.21  E-value=0.00017  Score=25.12  Aligned_cols=23  Identities=26%  Similarity=0.586  Sum_probs=20.0

Q ss_pred             eeCCC--CccccccchHHHHHHhhh
Q psy10072         41 VKCPH--CAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        41 ~~c~~--C~~~f~~~~~l~~H~~~~   63 (84)
                      |.|+.  |++.|...+.|++|..+|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            78854  999999999999998776

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00017  Score=25.29  Aligned_cols=22  Identities=23%  Similarity=0.738  Sum_probs=11.2

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |+|..|.....+.++|..|+..
T Consensus         3 FkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           3 FKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             cccceecccccCcchHHHHHHH
Confidence            4555555444555555555443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00011  Score=25.29  Aligned_cols=22  Identities=27%  Similarity=0.670  Sum_probs=17.6

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |+|..|++.|....+|..|...
T Consensus         2 f~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHHH
Confidence            6788888888888888888543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.00022  Score=24.48  Aligned_cols=23  Identities=17%  Similarity=0.340  Sum_probs=20.3

Q ss_pred             CeecCCCCccccChhhHHHHHHh
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRI   35 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~   35 (84)
                      ||.|..||+.+-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            78999999999999999988753

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00018  Score=25.24  Aligned_cols=24  Identities=33%  Similarity=0.991  Sum_probs=21.4

Q ss_pred             CCeecCCCCccccChhhHHHHHHh
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRI   35 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~   35 (84)
                      +||.|..|...-...++|.+|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999888899999999864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00032  Score=27.82  Aligned_cols=27  Identities=15%  Similarity=0.235  Sum_probs=22.7

Q ss_pred             CCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ..+.|..|++.|.....|.+|...|..
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            357899999999999999999887754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.92  E-value=0.00041  Score=23.23  Aligned_cols=21  Identities=33%  Similarity=0.792  Sum_probs=16.4

Q ss_pred             eeCCCCccccccchHHHHHHh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~   61 (84)
                      |+|..|...|.+...|..|+-
T Consensus         3 ykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHH
Confidence            678888888888888877764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00044  Score=24.13  Aligned_cols=22  Identities=18%  Similarity=0.600  Sum_probs=20.5

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |.|..|...|...++|..||..
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHS
T ss_pred             cccceeeeeEeeccchhHhhhh
Confidence            7899999999999999999975

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.58  E-value=0.0015  Score=21.90  Aligned_cols=20  Identities=20%  Similarity=0.783  Sum_probs=9.9

Q ss_pred             eCCCCccccccchHHHHHHh
Q psy10072         42 KCPHCAYKCVKQKDLNTHIE   61 (84)
Q Consensus        42 ~c~~C~~~f~~~~~l~~H~~   61 (84)
                      .|+.|-+.|.+.+++..|..
T Consensus         3 pcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           3 PCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             ECTTTCCEESCHHHHHHHHH
T ss_pred             CCchhhHHhccccCceEEEE
Confidence            45555555555555544443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0015  Score=23.80  Aligned_cols=25  Identities=24%  Similarity=0.380  Sum_probs=15.5

Q ss_pred             CeecCCCCccccChhhHHHHHHhcC
Q psy10072         13 PYKCTFCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        13 ~~~c~~C~~~f~~~~~l~~h~~~~~   37 (84)
                      .|.|..|+++|.......+|-....
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            3566777777776666666655433

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0019  Score=22.24  Aligned_cols=23  Identities=30%  Similarity=0.741  Sum_probs=12.3

Q ss_pred             eecCCCCccccChhhHHHHHHhc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIH   36 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~   36 (84)
                      -.|++|....+.+..|..|.+.|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34555555555555555555544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0018  Score=23.61  Aligned_cols=24  Identities=13%  Similarity=0.454  Sum_probs=20.9

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.|..|++.|.....+.+|.....
T Consensus         5 fvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeecccccchhcchHHHHHhhhcC
Confidence            899999999999999999976544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00098  Score=26.37  Aligned_cols=24  Identities=17%  Similarity=0.358  Sum_probs=21.6

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.|..|++.|.....|..|...|.
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeccccccccCCHHHHhHhHHhcC
Confidence            899999999999999999977664

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.36  E-value=0.00099  Score=24.09  Aligned_cols=23  Identities=22%  Similarity=0.416  Sum_probs=18.5

Q ss_pred             CCeecCCCCccccChhhHHHHHH
Q psy10072         12 KPYKCTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        12 k~~~c~~C~~~f~~~~~l~~h~~   34 (84)
                      ..|.|..||..|+..+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            34778889999988888888865

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0016  Score=23.92  Aligned_cols=19  Identities=21%  Similarity=0.072  Sum_probs=10.5

Q ss_pred             cccccchHHHHHHhhhCCC
Q psy10072         48 YKCVKQKDLNTHIERRHMP   66 (84)
Q Consensus        48 ~~f~~~~~l~~H~~~~~~~   66 (84)
                      +.|.....|..|++.|++|
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3455555566666665553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0039  Score=21.32  Aligned_cols=22  Identities=32%  Similarity=0.874  Sum_probs=13.1

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |+|+.|+-.....+.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5566666666666666666543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.79  E-value=0.002  Score=23.53  Aligned_cols=23  Identities=30%  Similarity=0.673  Sum_probs=12.4

Q ss_pred             CCCeecCCCCccccChhhHHHHH
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHL   33 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~   33 (84)
                      +..|+|..|.+++...+++.+|-
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHH
Confidence            34455555555555555555553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0041  Score=21.39  Aligned_cols=19  Identities=11%  Similarity=0.321  Sum_probs=13.6

Q ss_pred             CccccccchHHHHHHhhhC
Q psy10072         46 CAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        46 C~~~f~~~~~l~~H~~~~~   64 (84)
                      |.+.|++.+.+..|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7777777777777776653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.60  E-value=0.011  Score=23.14  Aligned_cols=30  Identities=27%  Similarity=0.544  Sum_probs=20.9

Q ss_pred             ceeeCCCCccccccchHHHHHHhhhCCCCC
Q psy10072         39 LKVKCPHCAYKCVKQKDLNTHIERRHMPGD   68 (84)
Q Consensus        39 ~~~~c~~C~~~f~~~~~l~~H~~~~~~~~~   68 (84)
                      .+-.|+.|+...++..+|.+|...-+-.+|
T Consensus        23 qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            336788888888888888888776554444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.013  Score=20.32  Aligned_cols=22  Identities=18%  Similarity=0.469  Sum_probs=12.8

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |.|..|++..+....++.|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            4566666666666556555443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.01  Score=24.94  Aligned_cols=38  Identities=18%  Similarity=0.408  Sum_probs=25.1

Q ss_pred             cCCCCeecCCCCccccChhhHHHHHHhcCCce-eeCCCCccc
Q psy10072          9 TGEKPYKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYK   49 (84)
Q Consensus         9 ~~~k~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~   49 (84)
                      +...-|.|+.|++.|......   +....... |.|..|+-.
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~---~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEAN---QLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHH---HHEETTTTEEBCSSSCCB
T ss_pred             ccCCceECCCCCCCcchhhHH---HhcCcCCCeEEecCCCCE
Confidence            344569999999998765432   23333333 999998754

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.45  E-value=0.017  Score=19.53  Aligned_cols=20  Identities=20%  Similarity=0.321  Sum_probs=13.4

Q ss_pred             CCCccccccchHHHHHHhhh
Q psy10072         44 PHCAYKCVKQKDLNTHIERR   63 (84)
Q Consensus        44 ~~C~~~f~~~~~l~~H~~~~   63 (84)
                      ..|++.|.....|+.|+-.|
T Consensus         7 e~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeecc
Confidence            34777777777777776554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.0045  Score=26.50  Aligned_cols=20  Identities=20%  Similarity=0.428  Sum_probs=9.6

Q ss_pred             eecCCCCccccChhhHHHHH
Q psy10072         14 YKCTFCPFTAAHSSTMSYHL   33 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~   33 (84)
                      |.|..|++.|.+...|..|.
T Consensus        16 fYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHT
T ss_pred             EecccccCccCCHHHHHHHH
Confidence            44455555555444444443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.0073  Score=25.83  Aligned_cols=22  Identities=27%  Similarity=0.590  Sum_probs=20.2

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |-|..|++.|.+...|..|.+.
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            8999999999999999999764

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.19  E-value=0.0073  Score=25.44  Aligned_cols=24  Identities=25%  Similarity=0.616  Sum_probs=16.8

Q ss_pred             eeCCCCccccccchHHHHHHhhhC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      |+|..|+..|.....|..|+..|.
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhcc
Confidence            777777777777777777765554

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.058  Score=21.18  Aligned_cols=20  Identities=20%  Similarity=0.497  Sum_probs=15.9

Q ss_pred             eecCCCCccccChhhHHHHH
Q psy10072         14 YKCTFCPFTAAHSSTMSYHL   33 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~   33 (84)
                      -.|..|+..|+...+++.|+
T Consensus         7 ~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccCcccceeeeeecchHhhh
Confidence            57888888888887777775

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.053  Score=22.75  Aligned_cols=28  Identities=25%  Similarity=0.679  Sum_probs=24.6

Q ss_pred             CCCeecCCCCccccChhhHHHHHHhcCC
Q psy10072         11 EKPYKCTFCPFTAAHSSTMSYHLRIHQD   38 (84)
Q Consensus        11 ~k~~~c~~C~~~f~~~~~l~~h~~~~~~   38 (84)
                      ...|.|..|...|.....|..|...|+.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3469999999999999999999988874

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=89.56  E-value=0.14  Score=25.83  Aligned_cols=36  Identities=19%  Similarity=0.485  Sum_probs=25.6

Q ss_pred             hHHHHHHhc--CCce------eeCCCCccccccchHHHHHHhhhC
Q psy10072         28 TMSYHLRIH--QDLK------VKCPHCAYKCVKQKDLNTHIERRH   64 (84)
Q Consensus        28 ~l~~h~~~~--~~~~------~~c~~C~~~f~~~~~l~~H~~~~~   64 (84)
                      .|..|+...  +|+.      |+|..|++ |-...++.+|++.|.
T Consensus       126 rlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         126 ALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcC
Confidence            466777642  3432      59999998 556778999998875

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.30  E-value=0.18  Score=18.40  Aligned_cols=19  Identities=21%  Similarity=0.384  Sum_probs=10.0

Q ss_pred             cCCCCccccChhhHHHHHH
Q psy10072         16 CTFCPFTAAHSSTMSYHLR   34 (84)
Q Consensus        16 c~~C~~~f~~~~~l~~h~~   34 (84)
                      |..|+..|....++..|..
T Consensus        11 C~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHH
T ss_pred             HhhCCceehhHHHHHHHHH
Confidence            5555555555555555544

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.85  E-value=0.18  Score=17.21  Aligned_cols=18  Identities=22%  Similarity=0.311  Sum_probs=10.7

Q ss_pred             CCccccccchHHHHHHhh
Q psy10072         45 HCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        45 ~C~~~f~~~~~l~~H~~~   62 (84)
                      -|++.|+....|.-|...
T Consensus         7 gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTCCEESSHHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHHH
Confidence            366666666666655543

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.72  E-value=0.28  Score=16.76  Aligned_cols=22  Identities=18%  Similarity=0.643  Sum_probs=13.2

Q ss_pred             eeCC--CCccccccchHHHHHHhh
Q psy10072         41 VKCP--HCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~--~C~~~f~~~~~l~~H~~~   62 (84)
                      |.|.  .|+..|....++..|...
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHHhh
Confidence            4453  366667766666666543

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.97  E-value=0.32  Score=17.53  Aligned_cols=22  Identities=18%  Similarity=0.398  Sum_probs=18.3

Q ss_pred             eeCCCCccccccchHHHHHHhh
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIER   62 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~   62 (84)
                      |-|..|.+-......+.+|+..
T Consensus         8 yiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           8 YLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeehhhhhhhCCHHHHHHHHHh
Confidence            8888898888888888888764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.79  E-value=0.23  Score=17.31  Aligned_cols=20  Identities=20%  Similarity=0.235  Sum_probs=9.4

Q ss_pred             CCCccccChhhHHHHHHhcC
Q psy10072         18 FCPFTAAHSSTMSYHLRIHQ   37 (84)
Q Consensus        18 ~C~~~f~~~~~l~~h~~~~~   37 (84)
                      .|+..|.....|..|+-.|+
T Consensus        10 dC~A~ynk~wkL~AHLckHT   29 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHT   29 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHH
T ss_pred             CcchhhccchhhhHHhhhhc
Confidence            35545544444554444443

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=86.35  E-value=0.11  Score=19.38  Aligned_cols=30  Identities=3%  Similarity=-0.293  Sum_probs=18.9

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      +.|+.||..|..        .+...+. -.|..|+...-
T Consensus         3 ~vc~~cG~~Yh~--------~~~pPk~~g~CD~cg~~L~   33 (37)
T d2ak3a2           3 WIHPGSGRVYNI--------EFNPPKTMGIDDLTGEPLV   33 (37)
T ss_dssp             EEETTTTEEEET--------TTBCCSSTTBCTTTCCBCB
T ss_pred             eeeCCcCChhhh--------ccCCccccCCccCCCCcCE
Confidence            568888887753        2333444 68888876543

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.68  E-value=0.44  Score=22.51  Aligned_cols=25  Identities=16%  Similarity=0.339  Sum_probs=21.1

Q ss_pred             eeCCCCccccccchHHHHHHhhhCC
Q psy10072         41 VKCPHCAYKCVKQKDLNTHIERRHM   65 (84)
Q Consensus        41 ~~c~~C~~~f~~~~~l~~H~~~~~~   65 (84)
                      ..|..|.+.|.....+..|++..|.
T Consensus        16 ~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          16 TPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             ceecccCCccCCHHHHHHHHHHhhC
Confidence            6889999999988889999887655

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.50  E-value=0.29  Score=18.24  Aligned_cols=30  Identities=7%  Similarity=-0.163  Sum_probs=18.2

Q ss_pred             eecCCCCccccChhhHHHHHHhcCCce-eeCCCCccccc
Q psy10072         14 YKCTFCPFTAAHSSTMSYHLRIHQDLK-VKCPHCAYKCV   51 (84)
Q Consensus        14 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~c~~C~~~f~   51 (84)
                      +.|+.||..|...        +...+. -.|..|+..+.
T Consensus         3 r~C~~cG~~Yh~~--------~~ppk~~g~CD~cg~~L~   33 (38)
T d1akya2           3 LIHPASGRSYHKI--------FNPPKEDMKDDVTGEALV   33 (38)
T ss_dssp             EECTTTCCEEETT--------TBCCSSTTBCTTTCCBCB
T ss_pred             cCCcCccchhhhh--------ccCcCcCCccCCCCCEee
Confidence            5688888877542        223333 57888875443