Psyllid ID: psy10075

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MKQEDEILNHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF
Secondary Structure (PSIPRED)
cccccHHHHHcccccHHHHcccccccccccccHHccccccccccccccccccccccccccHHcccccHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccHHccccccHHHHccccccccccccccccccccccccccHHHHHHccccccccccccccccHHHcccccHHHHHHHcccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEccccHHHHHHccccccccccccccccEccccHHHHHHHHcccccccEcccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHccEccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHHccccccccccccccccccccccHHHHHHccccccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccEEEcccccccccccccccc
Coil and Loop (DISEMBL)
MKQEDEILNHSrecafvsrlddsYNFICILCNYHAENFENIYlhlpshfeqklfscdlceyqtntKIYIRRHMLKIHLRQrnlecslcdstfsdnmDLKKHIQrkhtndrpfscnfcdyksktkyditshslrkhskgdkphkcticestYLTKVELKNHILKIhqgqtrfqcsfcdrrfyfknectkhylehhtnekpfkctlcSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHinkkhandedkpftcehcdskfckkydmkmhmsrahyglkpfkcsfceykcttkfglKSHVTRihsnqkyfcgscnfsctsnTDLLEHVqtnhiivgesssrdFIIHSFVKNAMYHCQITLNAF
Flexible Loop (DISEMBL)
mkqedeilnhSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHiqrkhtndrpfscNFCDYKSKTKYDITShslrkhskgdkphkcTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYlehhtnekpfkCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKhandedkpftcEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF
Low Complexity Region (SEG)
MKQEDEILNHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF
Disordered region (IsUnstruct)
***********RECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDIT*************HKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHA***DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITL***
Disordered Region (DISOPRED)
*****************SRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF
Disordered Region (DISEMBL)
MKQEDEILNHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDI*************PHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF
Disordered Region (DISPRO)
***EDEILNHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLN*F
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKQEDEILNHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
O62836	800	Zinc finger X-chromosomal	yes	N/A	0.817	0.381	0.310	2e-34
P17012	799	Zinc finger X-chromosomal	yes	N/A	0.817	0.381	0.307	3e-34
P17010	805	Zinc finger X-chromosomal	no	N/A	0.817	0.378	0.310	3e-34
Q52V16	801	Zinc finger Y-chromosomal	N/A	N/A	0.831	0.387	0.309	3e-34
Q6B4Z5	801	Zinc finger Y-chromosomal	no	N/A	0.831	0.387	0.309	4e-34
P08048	801	Zinc finger Y-chromosomal	no	N/A	0.831	0.387	0.306	5e-34
P23607	742	Zinc finger autosomal pro	no	N/A	0.766	0.385	0.314	2e-33
Q95LI3	801	Zinc finger Y-chromosomal	no	N/A	0.817	0.380	0.307	3e-33
Q9NTW7	645	Zinc finger protein 64 ho	no	N/A	0.761	0.440	0.332	7e-32
Q01611	794	Zinc finger Y-chromosomal	N/A	N/A	0.699	0.328	0.310	4e-31

>sp|O62836|ZFX_BOVIN Zinc finger X-chromosomal protein OS=Bos taurus GN=ZFX PE=2 SV=2

 Score =  146 bits (369), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 485 CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 544

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK + P KC
Sbjct: 545 CVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSK-EMPFKC 602

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L IHQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 603 DICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDM 661

Query: 205 CSYKAKRNFELKQHIL-----RIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDED 259
           C     R  ELK+H+      ++HQ        C +CD+  +   +L  HI   H   +D
Sbjct: 662 CDKGFHRPSELKKHVAAHKGKKMHQ--------CRHCDFKIADPFVLSRHILSVHT--KD 711

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-K 318
            PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    
Sbjct: 712 LPFRCKRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYP 770

Query: 319 YFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
           + C  C       ++  +H+  +H  VG
Sbjct: 771 HRCEYCKKGFRRPSEKNQHIMRHHKEVG 798

Probable transcriptional activator.
Bos taurus (taxid: 9913)

>sp|P17012|ZFX_MOUSE Zinc finger X-chromosomal protein OS=Mus musculus GN=Zfx PE=1 SV=2

 Score =  146 bits (368), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 484 CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 543

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK + P KC
Sbjct: 544 CVECGKGFRHPSELKKHM-RIHTGEKPYECQYCEYRSADSSNLKTHVKTKHSK-EMPFKC 601

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L +HQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 602 DICLLTFSDTKEVQQHAL-VHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDM 660

Query: 205 CSYKAKRNFELKQHIL-----RIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDED 259
           C     R  ELK+H+      ++HQ        C +CD+  +   +L  HI   H   +D
Sbjct: 661 CDKGFHRPSELKKHVAAHKGKKMHQ--------CRHCDFKIADPFVLSRHILSVHT--KD 710

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-K 318
            PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    
Sbjct: 711 LPFRCKRCRKGFRQQSELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYP 769

Query: 319 YFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
           + C  C       ++  +H+  +H  VG
Sbjct: 770 HRCEYCKKGFRRPSEKNQHIMRHHKEVG 797

Probable transcriptional activator.

Mus musculus (taxid: 10090)

>sp|P17010|ZFX_HUMAN Zinc finger X-chromosomal protein OS=Homo sapiens GN=ZFX PE=2 SV=2

 Score =  146 bits (368), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 490 CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 549

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK + P KC
Sbjct: 550 CVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSK-EMPFKC 607

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L IHQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 608 DICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDM 666

Query: 205 CSYKAKRNFELKQHIL-----RIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDED 259
           C     R  ELK+H+      ++HQ        C +CD+  +   +L  HI   H   +D
Sbjct: 667 CDKGFHRPSELKKHVAAHKGKKMHQ--------CRHCDFKIADPFVLSRHILSVHT--KD 716

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-K 318
            PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    
Sbjct: 717 LPFRCKRCRKGFRQQSELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYP 775

Query: 319 YFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
           + C  C       ++  +H+  +H  VG
Sbjct: 776 HRCEYCKKGFRRPSEKNQHIMRHHKEVG 803

Probable transcriptional activator.

Homo sapiens (taxid: 9606)

>sp|Q52V16|ZFY_GORGO Zinc finger Y-chromosomal protein OS=Gorilla gorilla gorilla GN=ZFY PE=3 SV=1

 Score =  146 bits (368), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 13/323 (4%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 486 CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 545

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK + P KC
Sbjct: 546 CVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSK-EMPFKC 603

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L +HQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 604 DICLLTFSDTKEVQQHTL-VHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEM 662

Query: 205 CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTC 264
           C     R  ELK+H+  +H+   +  + C +CD+  +   +L  HI   H   +D PF C
Sbjct: 663 CEKGFHRPSELKKHVA-VHKG--KKMHQCRHCDFKIADPFVLSRHILSVHT--KDLPFRC 717

Query: 265 EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-KYFCGS 323
           + C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    + C  
Sbjct: 718 KRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEY 776

Query: 324 CNFSCTSNTDLLEHVQTNHIIVG 346
           C       ++  +H+  +H  VG
Sbjct: 777 CKKGFRRPSEKNQHIMRHHKEVG 799

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Gorilla gorilla gorilla (taxid: 9595)

>sp|Q6B4Z5|ZFY_PANTR Zinc finger Y-chromosomal protein OS=Pan troglodytes GN=ZFY PE=2 SV=1

 Score =  145 bits (367), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 13/323 (4%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 486 CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 545

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK + P KC
Sbjct: 546 CVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSK-EMPLKC 603

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L +HQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 604 DICLLTFSDTKEVQQHTL-VHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEM 662

Query: 205 CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTC 264
           C     R  ELK+H+  +H+   +  + C +CD+  +   +L  HI   H   +D PF C
Sbjct: 663 CEKGFHRPSELKKHVA-VHKG--KKMHQCRHCDFKIADPFVLSRHILSVHT--KDLPFRC 717

Query: 265 EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-KYFCGS 323
           + C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    + C  
Sbjct: 718 KRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEY 776

Query: 324 CNFSCTSNTDLLEHVQTNHIIVG 346
           C       ++  +H+  +H  VG
Sbjct: 777 CKKGFRRPSEKNQHIMRHHKEVG 799

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Pan troglodytes (taxid: 9598)

>sp|P08048|ZFY_HUMAN Zinc finger Y-chromosomal protein OS=Homo sapiens GN=ZFY PE=1 SV=3

 Score =  145 bits (366), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 13/323 (4%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 486 CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 545

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +L+KH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK + P KC
Sbjct: 546 CVECGKGFRHPSELRKHM-RIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSK-EMPFKC 603

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L +HQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 604 DICLLTFSDTKEVQQHTL-VHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEM 662

Query: 205 CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTC 264
           C     R  ELK+H+  +H+   +  + C +CD+  +   +L  HI   H   +D PF C
Sbjct: 663 CEKGFHRPSELKKHVA-VHKG--KKMHQCRHCDFKIADPFVLSRHILSVHT--KDLPFRC 717

Query: 265 EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-KYFCGS 323
           + C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    + C  
Sbjct: 718 KRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEY 776

Query: 324 CNFSCTSNTDLLEHVQTNHIIVG 346
           C       ++  +H+  +H  VG
Sbjct: 777 CKKGFRRPSEKNQHIMRHHKEVG 799

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Homo sapiens (taxid: 9606)

>sp|P23607|ZFA_MOUSE Zinc finger autosomal protein OS=Mus musculus GN=Zfa PE=2 SV=1

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 152/296 (51%), Gaps = 10/296 (3%)

Query: 52  KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRP 111
           K+  C  CEY+T  +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P
Sbjct: 454 KMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFCHPSELKKHM-RIHTGEKP 512

Query: 112 FSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRF 171
           + C +C+Y+S    ++ +H   KHSK + P KC IC  T+    E++ H L +HQ     
Sbjct: 513 YECQYCEYRSTDSSNLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-VHQESKTH 570

Query: 172 QCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEY 231
           QC  CD +    ++  +H +  HT + P KC +C     R  ELK+H+   H+   +  +
Sbjct: 571 QCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVA-AHKG--KKTH 627

Query: 232 HCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPF 291
            C +CD+  +   +L  HI   H   +D PF C+ C ++F ++ ++K HM + H G K +
Sbjct: 628 QCRHCDFKIADPFVLSRHILSVHT--KDLPFRCKRCRTRFRQQSELKKHM-KTHSGQKVY 684

Query: 292 KCSFCEYKCTTKFGLKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
           +C +C+Y  T   G K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct: 685 QCEYCDYSTTDASGFKRHVISIHTKDYPHCCEHCKKGFRRPSEKNQHIMRHHKEVG 740

Probable transcriptional activator. ZFA is an expressed retroposon derived from an alternative transcript of the ZFX gene.

Mus musculus (taxid: 10090)

>sp|Q95LI3|ZFY_BOVIN Zinc finger Y-chromosomal protein OS=Bos taurus GN=ZFY PE=2 SV=1

 Score =  143 bits (360), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 159/328 (48%), Gaps = 23/328 (7%)

Query: 28  CILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE 84
           C  C  H  +   ++ H   H E+   K+  C  CEY+T  +  + RH+L +H +     
Sbjct: 486 CDDCGKHFSHAGALFTHKMVHKEKGASKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHI 545

Query: 85  CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    ++ +H   KHSK +   KC
Sbjct: 546 CVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSK-EMSFKC 603

Query: 145 TICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
            IC  T+    E++ H L IHQ     QC  CD +    ++  +H +  HT + P KC +
Sbjct: 604 DICLLTFSDTKEVQQHAL-IHQESKTHQCVHCDHKSSNSSDLKRHIISVHTKDYPHKCDM 662

Query: 205 CSYKAKRNFELKQHIL-----RIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDED 259
           C     R  ELK+H+      ++HQ        C +CD+  +   +L  HI   H   +D
Sbjct: 663 CDKGFHRPSELKKHVAAHKGKKMHQ--------CRHCDFKIADPFVLSRHILSVHT--KD 712

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ-K 318
            PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+    
Sbjct: 713 LPFRCKRCKKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYP 771

Query: 319 YFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
           + C  C       ++  +H+  +H  VG
Sbjct: 772 HRCEYCKKGFRRPSEKNQHITRHHKEVG 799

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Bos taurus (taxid: 9913)

>sp|Q9NTW7|ZF64B_HUMAN Zinc finger protein 64 homolog, isoforms 3 and 4 OS=Homo sapiens GN=ZFP64 PE=2 SV=3

 Score =  138 bits (347), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 156/349 (44%), Gaps = 65/349 (18%)

Query: 35  AENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLR----QRNLECSLCDS 90
           A   +++  HL  H   K   C++C      K + R+  LK H+R     +  +C  CD 
Sbjct: 156 AYGMKDMERHLKIHTGDKPHKCEVC-----GKCFSRKDKLKTHMRCHTGVKPYKCKTCDY 210

Query: 91  TFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKG----DKPHK-CT 145
             +D+  L KH+ R H+++RPF C  C Y S+    +T H LR H+      D P   C 
Sbjct: 211 AAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTVH-LRSHTASELDDDVPKANCL 268

Query: 146 ICESTYLTKV-------------------------------------ELKNHILKIHQGQ 168
             EST   K                                      +L  H L+IH G 
Sbjct: 269 STESTDTPKAPVITLPSEAREQMATLGERTFNCCYPGCHFKTVHGMKDLDRH-LRIHTGD 327

Query: 169 TRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIE 228
              +C FCD+ F  K+  T H +  HT+ KP KC LC Y A  +  LK+H LRIH D  E
Sbjct: 328 KPHKCEFCDKCFSRKDNLTMH-MRCHTSVKPHKCHLCDYAAVDSSSLKKH-LRIHSD--E 383

Query: 229 AEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL 288
             Y C  C Y   + + L  H+    ++  D PF C  C +KF    D+K HM   H G 
Sbjct: 384 RPYKCQLCPYASRNSSQLTVHLR---SHTGDTPFQCWLCSAKFKISSDLKRHMI-VHSGE 439

Query: 289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEH 337
           KPFKC FC+ +CT K  LKSH+   H+   + C  C F      DLLEH
Sbjct: 440 KPFKCEFCDVRCTMKANLKSHIRIKHT---FKCLHCAFQGRDRADLLEH 485

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q01611|ZFY1_XENLA Zinc finger Y-chromosomal protein 1 OS=Xenopus laevis GN=zfy1 PE=2 SV=1

 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 22/283 (7%)

Query: 41  IYLHLPSHFEQ---KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMD 97
           ++ H  +H E+   K+  C  C+Y+T  +  + RH+L +H +     C  C   F    +
Sbjct: 492 LFAHKLTHNEKAGNKMHICKFCDYETAEQGLLNRHLLAVHSKSFPHICVECGKGFRHPSE 551

Query: 98  LKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVEL 157
           LKKH+ R HT ++P+ C +CDY+S    ++ +H   KHSK + P KC IC  T+    +L
Sbjct: 552 LKKHM-RTHTGEKPYLCQYCDYRSADSSNLKTHVKTKHSK-EMPFKCDICLQTFTDSKDL 609

Query: 158 KNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQ 217
           + H + +HQ     QC  CD +    ++  +H +  HT + P KC +C     R  ELK+
Sbjct: 610 QEHAI-LHQESKNHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEVCEKGFHRPSELKK 668

Query: 218 HIL-----RIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFC 272
           H       ++HQ        C +C++  +   +L  HI   H   ++ P+ C+ C   F 
Sbjct: 669 HEAAHKGKKMHQ--------CRHCEFHIADPFVLSRHILSVHT--KELPYRCKRCKKGFR 718

Query: 273 KKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
           ++ ++K HM + H G K ++C +CEY  T   G K HV  IH+
Sbjct: 719 QQIELKKHM-KTHSGKKVYQCEYCEYNTTDASGFKRHVISIHT 760

Probable transcriptional activator.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
260786741	519	hypothetical protein BRAFLDRAFT_198833 [	0.825	0.593	0.302	1e-41
260823044	540	hypothetical protein BRAFLDRAFT_71718 [B	0.828	0.572	0.309	3e-39
260787847	928	hypothetical protein BRAFLDRAFT_125436 [	0.833	0.335	0.311	5e-39
260806350	299	hypothetical protein BRAFLDRAFT_252916 [	0.798	0.996	0.319	6e-39
260813382	410	hypothetical protein BRAFLDRAFT_243962 [	0.806	0.734	0.330	9e-39
260806225	603	hypothetical protein BRAFLDRAFT_79782 [B	0.844	0.522	0.304	1e-38
260823016	581	hypothetical protein BRAFLDRAFT_71733 [B	0.823	0.528	0.326	1e-38
260781009	392	hypothetical protein BRAFLDRAFT_63005 [B	0.804	0.765	0.333	1e-38
260837226	551	hypothetical protein BRAFLDRAFT_93649 [B	0.847	0.573	0.325	1e-38
260795993	476	hypothetical protein BRAFLDRAFT_275725 [	0.747	0.586	0.333	2e-38

>gi|260786741|ref|XP_002588415.1| hypothetical protein BRAFLDRAFT_198833 [Branchiostoma floridae] gi|229273577|gb|EEN44426.1| hypothetical protein BRAFLDRAFT_198833 [Branchiostoma floridae]

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 162/347 (46%), Gaps = 39/347 (11%)

Query: 26  FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
           ++C  C Y   N  ++  H+ +H   K F CD C+Y T  K ++  HM   H  ++   C
Sbjct: 85  YMCDECGYRTSNRYSLSQHMRTHTGVKPFKCDRCDYSTAQKCHLSEHMKTKHTGEKAYMC 144

Query: 86  SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
           + C    S +    +H+ R HT ++P+ C+ CDY +  KY +  H + KH+ G++P+KC 
Sbjct: 145 TECGYRTSHSSSFSRHM-RTHTGEKPYKCDLCDYSAAQKYPLDQHIMVKHT-GERPYKCD 202

Query: 146 ICESTYLTKVELKNHI-------------------------------LKIHQGQTRFQCS 174
            C+ +   K  L  HI                               ++ H G+  ++C 
Sbjct: 203 QCDYSAAQKGTLDQHIMVNHTGERPYKSYMCTECGYRTSHSSSFSRHMRTHTGEKPYKCD 262

Query: 175 FCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCT 234
            CD     K    +H +  HT E+P+KC  C Y A +   L QHI+  H    E  Y C 
Sbjct: 263 LCDYSAAQKYPLDQHIMVKHTGERPYKCDQCDYSAAQKGTLDQHIMVNHTG--ERPYKCD 320

Query: 235 YCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS 294
            CDY  + +  L +HI  KH    +KP+ C+ C  +   +Y++  HM R H G+KPFKC 
Sbjct: 321 QCDYSATKKGTLDTHIMVKHTG--EKPYMCDECGFRTAIRYNLSQHM-RTHTGVKPFKCD 377

Query: 295 FCEYKCTTKFGLKSHVTRIHSNQK-YFCGSCNFSCTSNTDLLEHVQT 340
            C+Y    K  L  HV   H+ +K Y C  C +    N +L  H++T
Sbjct: 378 RCDYSTAQKGNLNIHVKTKHTGEKAYMCTECGYRTGHNANLSRHMRT 424

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823044|ref|XP_002603993.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae] gi|229289318|gb|EEN60004.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 161/320 (50%), Gaps = 11/320 (3%)

Query: 21  DDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQ 80
           D+   +IC  C Y A +   +  H+ +H  +K ++CD C++ T+ K  + RH+   H  +
Sbjct: 142 DNDKPYICAECGYRATHKCTLAYHMRTHTGEKPYNCDHCDFSTSHKSNLDRHIAAKHTGE 201

Query: 81  RNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDK 140
           +   C  C         L +H+ R HT +RP+ C+ CDY +  K D+  H L KH+ G++
Sbjct: 202 KPYMCGGCGYRTIYRSHLSRHM-RTHTGERPYKCDKCDYSAAQKGDLDKH-LVKHT-GEQ 258

Query: 141 PHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPF 200
           P  C  C      K  L  H ++ H+G   ++C  C  R  +K+  ++H +  HT EKP+
Sbjct: 259 PFICGECGYRSAQKSNLSTH-MRTHRGDKPYKCDQCGYRTAWKSHLSQH-MRTHTGEKPY 316

Query: 201 KCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDK 260
           KC  C Y A +     QH+++    + E  Y C  CDY  + ++ L +H   KH+ +  K
Sbjct: 317 KCDQCDYSAAQKSTFDQHVIK---HSGEKPYKCDQCDYSAAQKSTLDNHTVAKHSGE--K 371

Query: 261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYF 320
           P+ C  C  +   K D+  HM R H G KP+KC  C+Y    K  L  H+ +   ++ Y 
Sbjct: 372 PYICGECGYRAVHKSDLSKHM-RTHTGEKPYKCDQCDYSAAQKSTLDQHLRKHTGDKPYM 430

Query: 321 CGSCNFSCTSNTDLLEHVQT 340
           CG C +     ++L  H++T
Sbjct: 431 CGECGYRTAQKSNLSTHMRT 450

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260787847|ref|XP_002588963.1| hypothetical protein BRAFLDRAFT_125436 [Branchiostoma floridae] gi|229274135|gb|EEN44974.1| hypothetical protein BRAFLDRAFT_125436 [Branchiostoma floridae]

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 13/324 (4%)

Query: 22  DSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQR 81
           D   ++C  C Y A    ++ +H+ +H  +K + CD C+Y    K  + RH + IH   +
Sbjct: 48  DEKPYMCAECGYRAARKSDLSIHMRTHTGEKPYKCDQCDYSAADKSTLNRHRV-IHTGDK 106

Query: 82  NLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKP 141
              C  C    +    L +H+ R HT ++P+ C+ CDY +  K  +  H L KH+ GDKP
Sbjct: 107 PYMCGECGYRATQKWHLSQHM-RTHTGEKPYKCDQCDYSAARKCSLDRH-LTKHT-GDKP 163

Query: 142 HKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFK 201
           + C  C      K  L  H ++IH GQ  F+C  CD     K    +H L  HT +KP+ 
Sbjct: 164 YMCGECGYRTARKCHLSEH-MRIHTGQKPFKCDQCDYSAAQKCNLDQH-LAKHTGDKPYM 221

Query: 202 CTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKP 261
           C  C Y+    + +  H +R H  +    Y C  CDY  + ++ L  H+ +   +  DKP
Sbjct: 222 CGQCGYRTAHKYAISIH-MRTHTGD--KPYKCDQCDYSAADKSTLNRHLAR---HTGDKP 275

Query: 262 FTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFC 321
           + C  C  +  +K+++  HM R H G KP+KC  C+Y  T K  L  H+     ++ Y C
Sbjct: 276 YMCGECGYRATQKWNLSNHM-RTHTGEKPYKCDQCDYSSTQKCNLDKHLAIHTGDKPYMC 334

Query: 322 GSCNFSCTSNTDLLEHVQTNHIIV 345
           G C +S    + L +H++T+ + V
Sbjct: 335 GECGYSVAQKSTLSQHMRTHTVSV 358

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260806350|ref|XP_002598047.1| hypothetical protein BRAFLDRAFT_252916 [Branchiostoma floridae] gi|229283318|gb|EEN54059.1| hypothetical protein BRAFLDRAFT_252916 [Branchiostoma floridae]

 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 12/310 (3%)

Query: 26  FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
           F+C  C Y   +  N+  H+ +H  +K + CDLC+Y    K  +  HM + H  +R  +C
Sbjct: 1   FVCGECGYRTGDRSNLSKHMRTHTGEKPYKCDLCDYSAALKSSLSVHM-RTHTGERPYKC 59

Query: 86  SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
             CD + +   +L  H+  KHT D+P+ C  C Y++  +  ++ H +R HS G+KP+KC 
Sbjct: 60  DQCDYSATRKSNLDNHVAAKHTGDKPYMCGECGYRTAQRSHLSRH-MRTHS-GEKPYKCD 117

Query: 146 ICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLC 205
            C+ +   K  L++HI   H G+  F C  C  R   +++ ++H +  HT EKP+KC  C
Sbjct: 118 QCDYSAAQKPHLEHHIAAQHTGEKPFMCGECGYRTVNRSDLSRH-MRTHTGEKPYKCEQC 176

Query: 206 SYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCE 265
            Y A +   L+ HI   H    E  + C  C Y    R+ L  H+     +   KP+ CE
Sbjct: 177 DYSAAQKPHLENHIAAQHTG--EKPFMCGECGYRTVYRSDLSRHMR---THTGKKPYKCE 231

Query: 266 HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK-YFCGSC 324
            CD    +K  +  H  + H G KP+ C  C Y+   +  L  H+ R H+ +K Y CG C
Sbjct: 232 QCDYYAARKSHLDEHRMK-HTGEKPYMCGVCGYRTAHQSYLSKHM-RTHTGEKPYMCGEC 289

Query: 325 NFSCTSNTDL 334
           ++S     +L
Sbjct: 290 DYSAAQKINL 299

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260813382|ref|XP_002601397.1| hypothetical protein BRAFLDRAFT_243962 [Branchiostoma floridae] gi|229286692|gb|EEN57409.1| hypothetical protein BRAFLDRAFT_243962 [Branchiostoma floridae]

 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 166/315 (52%), Gaps = 14/315 (4%)

Query: 26  FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
           ++C  C Y       + LH+ +H  +K + CD CEY    K  + +H+ K H  ++   C
Sbjct: 102 YMCGECGYRTAQRCTLSLHMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRK-HTGEKPYMC 160

Query: 86  SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
             C    +    L +H+ R HT ++P+ C+ CDY +  K  + +H++ KHS G+KP+ C 
Sbjct: 161 GECGFRTTHKESLSRHM-RTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHS-GEKPYMCG 218

Query: 146 ICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLC 205
            C    + K +L  H ++ H G+  ++C  CD     K+   +H L  HT EKP+ C  C
Sbjct: 219 ECGYRAVHKSDLSKH-MRTHTGEKPYKCDQCDYSAAQKSTLDQH-LRKHTGEKPYMCGEC 276

Query: 206 SYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCE 265
            Y+A R  +L Q ++RIH    E  Y C  CDY  + R+ L+ H  K   +  +KP+ C 
Sbjct: 277 GYRAARKSDLIQ-LMRIH--TGERPYKCDQCDYSAARRSALEKHQTK---HTGEKPYMCG 330

Query: 266 HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK-YFCGSC 324
            C  +  KK ++  H +R H G KP+KC  C+Y    K  L  H+ RIH+ +K Y C  C
Sbjct: 331 ECGYRTTKKSNLSRH-TRTHTGEKPYKCDQCDYSAARKSTLSRHM-RIHTGEKPYKCDQC 388

Query: 325 NFSCTSNTDLLEHVQ 339
           ++S T  + L++H++
Sbjct: 389 DYSATEKSTLVKHIR 403

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260806225|ref|XP_002597985.1| hypothetical protein BRAFLDRAFT_79782 [Branchiostoma floridae] gi|229283255|gb|EEN53997.1| hypothetical protein BRAFLDRAFT_79782 [Branchiostoma floridae]

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 40/355 (11%)

Query: 26  FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
           F C LC+Y     +N+  H+  H   K   C+LC+Y T  K  ++RH +  H  ++  +C
Sbjct: 94  FCCELCDYSTVRKQNLRRHITKHTGDKPHKCELCDYSTAVKKDLKRH-IATHTGEKPYKC 152

Query: 86  SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
            +C    +D   L+ H+  KHT ++PF C  CDY + TK ++ +H++ +HS G+KPHKC 
Sbjct: 153 DVCSYAAADKRYLRDHMT-KHTGEKPFQCEECDYFAATKGNLAAHTMARHS-GEKPHKCE 210

Query: 146 ICESTYLTKVELKN-----------------------------HILKIHQGQTRFQCSFC 176
           +C      K  L+                              HIL +H G+  + C +C
Sbjct: 211 VCGYAAALKGGLRQHMAKHAVVKPHKCDLCDYAGTLKAHLKTHHILSVHNGERPYHCGYC 270

Query: 177 DRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYC 236
           D     K+    H    H  E+ ++C  C Y A+++  L +H++  H  NI   + CT C
Sbjct: 271 DFSAARKDGLYVHIRTVHGGERAYQCQFCEYSAQQSGHLTEHVMAKH-SNIRP-HKCTLC 328

Query: 237 DYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC 296
           D+   ++  LK HI   H    +KP++CE C     +K  +K+HM++ H G KP+KC  C
Sbjct: 329 DFSSVTKKSLKRHIMTNHTG--EKPYSCELCSYAASEKSLLKLHMAK-HTGEKPYKCKMC 385

Query: 297 EYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSR 351
           +Y    K  L SH+    S + Y C  C++S    + L  H+    I  GE   R
Sbjct: 386 DYSSAKKGCLNSHMVIHTSEKPYNCDMCDYSTIGMSHLKLHMA---IHTGEKPFR 437

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823016|ref|XP_002603979.1| hypothetical protein BRAFLDRAFT_71733 [Branchiostoma floridae] gi|229289304|gb|EEN59990.1| hypothetical protein BRAFLDRAFT_71733 [Branchiostoma floridae]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 161/322 (50%), Gaps = 15/322 (4%)

Query: 26  FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
           ++C  C Y  E   N+  H+ +H  +K + CD C+Y    K  + +H L+IH  ++   C
Sbjct: 84  YMCGECGYRTEKKSNLSQHIRTHTGEKPYKCDQCDYSAARKSSLDKH-LQIHSGEKPYMC 142

Query: 86  SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
             C    +   DL +H+ R HT ++ + C+ CDY +  K ++  H LRKHS G+KP+ C 
Sbjct: 143 GECGYRTAQKSDLSRHM-RTHTGEKLYKCDQCDYSAAQKPNLDRH-LRKHS-GEKPYMCG 199

Query: 146 ICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLC 205
            C      KV L  H ++ H G+  ++C  CD     ++   KH L  HT EKP+ C  C
Sbjct: 200 ECGYRTNYKVSLSGH-MRTHTGEKPYKCDQCDYSAAVQSTLDKH-LAKHTGEKPYMCGEC 257

Query: 206 SYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCE 265
            Y+  +  +L +H +RIH    +  Y C  CDY  + +  L  H+ K   N  +KP+ C 
Sbjct: 258 GYRVTQKSDLSKH-MRIH--TGDKPYKCGQCDYSAAQKGHLDQHLIKH--NGGEKPYMCG 312

Query: 266 HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCN 325
            C  +   K  +  HM R H G KP+KC  C+Y    K  L  H  +    + Y CG C 
Sbjct: 313 ECGYRTAWKSHLFQHM-RTHTGEKPYKCDQCDYSAAQKGLLDQHRMKHTDKRPYMCGECG 371

Query: 326 FSCTSNTDLLEHVQTNHIIVGE 347
           +  T  +DL++H++   I  GE
Sbjct: 372 YRATQKSDLVKHMR---IHTGE 390

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260781009|ref|XP_002585621.1| hypothetical protein BRAFLDRAFT_63005 [Branchiostoma floridae] gi|229270639|gb|EEN41632.1| hypothetical protein BRAFLDRAFT_63005 [Branchiostoma floridae]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 163/318 (51%), Gaps = 18/318 (5%)

Query: 26  FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
           + C  C+Y A    N+ LHL  H  +K + C  C Y+   K  + RHM K H  ++  +C
Sbjct: 28  YKCDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHM-KTHTGEKPFKC 86

Query: 86  SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
             C+ + +    L KH+  KHT ++P+ C  C  ++  K+ + +H +R H+ G+KP+KC 
Sbjct: 87  DQCNYSAAQKSSLDKHLL-KHTGEKPYMCGECGLRTALKFTLLNH-MRTHT-GEKPYKCD 143

Query: 146 ICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLC 205
            C+ +   K  L++HI K H G+  + C  C  R   K+  +KH +  HT EKP+KC  C
Sbjct: 144 QCDYSAARKSTLEDHITK-HTGEKPYMCGECGYRTAKKSHLSKH-MRTHTGEKPYKCDQC 201

Query: 206 SYKAKRNFELKQHI---LRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPF 262
            Y A      K H+   +R H    E  Y C  CDY  + ++ L  H+ K   +  +KP+
Sbjct: 202 DYSA---TSYKSHLSVHMRTH--TGEKPYKCDQCDYAAARKSHLDQHLTK---HTGEKPY 253

Query: 263 TCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCG 322
            C  C  +  +K  +  HM R H G KP+KC  C+Y    K  L  H+T+   N+ Y CG
Sbjct: 254 MCGECGYRTTQKSTLSKHM-RTHTGEKPYKCDQCDYSAADKSSLDFHLTKHTGNKPYNCG 312

Query: 323 SCNFSCTSNTDLLEHVQT 340
            C +     +DLL+H +T
Sbjct: 313 ECGYRTRHKSDLLKHTRT 330

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260837226|ref|XP_002613606.1| hypothetical protein BRAFLDRAFT_93649 [Branchiostoma floridae] gi|229298992|gb|EEN69615.1| hypothetical protein BRAFLDRAFT_93649 [Branchiostoma floridae]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 155/326 (47%), Gaps = 10/326 (3%)

Query: 14  CAFVSRLDDSYN-FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRH 72
           CA  S+ +       C  C Y   N   +  H+ +H  ++ F C  CEY    K  +  H
Sbjct: 4   CAGKSKSEGKVKKLTCQFCEYKGVNSSRLEEHVRTHTGERPFQCQQCEYSARQKRVLEMH 63

Query: 73  MLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSL 132
           +   H  +R   C  CD + + +  L  H++  HT +RPF C  CD+ S  K  +  H +
Sbjct: 64  IRIKHTGERPYRCKHCDFSAASSTVLTNHVRATHTGERPFQCALCDFSSIYKASLQHHIM 123

Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLE 192
            KHS   +PHKCT C+   + K  L  H++  H     ++C  CD      +E  +H + 
Sbjct: 124 AKHS-SHRPHKCTECDFATVGKSILNRHMVN-HADVKPYRCELCDHSTNTNHELKRH-MA 180

Query: 193 HHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINK 252
            HT EKP KC  C Y +     LK+H+L +H D  E  Y C  CDY   SR  LK H  K
Sbjct: 181 THTGEKPHKCDFCDYSSTIKSSLKRHVLALHTD--EKPYKCDVCDYTAVSRYSLKQHAVK 238

Query: 253 KHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTR 312
              +  +KP+ C+ CD     K  +  HM + H G KP+KC  C Y  T    LK+H+T 
Sbjct: 239 ---HTGEKPYKCDTCDYATAVKSSLTTHMKK-HTGKKPYKCEICGYSATLLQYLKNHMTN 294

Query: 313 IHSNQKYFCGSCNFSCTSNTDLLEHV 338
              ++ Y C  C ++ ++   L EH+
Sbjct: 295 HTGDKPYKCELCEYAASTKKRLQEHM 320

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260795993|ref|XP_002592989.1| hypothetical protein BRAFLDRAFT_275725 [Branchiostoma floridae] gi|229278213|gb|EEN49000.1| hypothetical protein BRAFLDRAFT_275725 [Branchiostoma floridae]

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 151/291 (51%), Gaps = 12/291 (4%)

Query: 50  EQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTND 109
           + KL+ C  CEY+T  K++   HM  IH  ++  +CS CD + +    LK+H+  KH+ D
Sbjct: 4   DDKLYMCGECEYRTARKVHFSAHMA-IHTGEKPYKCSHCDYSAAQKGTLKRHLA-KHSGD 61

Query: 110 RPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQT 169
           +P+ C  C Y++  K +++ H +R H+ G+KP+KC  C+ +   K  LK H+   H  + 
Sbjct: 62  KPYMCGQCGYRTAQKRNLSEH-MRTHT-GEKPYKCDQCDYSAARKSTLKQHLAFTHSSEK 119

Query: 170 RFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEA 229
            F C  C  R   K+  ++H +  HT EKPFKC  C Y A R      H+L+      E 
Sbjct: 120 PFMCGKCGYRAAEKSRLSQH-MRTHTGEKPFKCDFCDYSAARKCTFDTHLLK---HKGEK 175

Query: 230 EYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
            Y C  CD+  S ++ L  H+ +   +  DKP+ C  C  +  +K  +  HM R H G K
Sbjct: 176 PYKCDQCDFSASQKSYLNKHLAR---HTGDKPYMCGECGYRTTQKAYLSQHM-RTHTGEK 231

Query: 290 PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQT 340
           P+KC  C+Y    K  L SH+    +++ Y CG C +     + L  H++T
Sbjct: 232 PYKCDQCDYSAALKSTLDSHIATHTNDKPYMCGECGYRTAQKSTLSGHMRT 282

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
UNIPROTKB|P08048	801	ZFY "Zinc finger Y-chromosomal	0.876	0.408	0.298	6.8e-48
ZFIN|ZDB-GENE-070705-205	473	si:ch73-138e16.6 "si:ch73-138e	0.804	0.634	0.346	1.8e-46
UNIPROTKB|F1M952	748	Zfx "Protein Zfx" [Rattus norv	0.876	0.437	0.304	2.2e-46
UNIPROTKB|E9PEP7	755	ZFX "Zinc finger X-chromosomal	0.876	0.433	0.304	2.4e-46
ZFIN|ZDB-GENE-071004-66	346	zgc:173816 "zgc:173816" [Danio	0.809	0.872	0.347	3e-46
UNIPROTKB|F1MPG2	799	ZFX "Zinc finger X-chromosomal	0.876	0.409	0.304	3.5e-46
UNIPROTKB|F1LMV1	799	Zfx "Protein Zfx" [Rattus norv	0.876	0.409	0.304	3.5e-46
UNIPROTKB|O62836	800	ZFX "Zinc finger X-chromosomal	0.876	0.408	0.304	3.6e-46
UNIPROTKB|F1PB02	800	LOC100856749 "Uncharacterized	0.876	0.408	0.304	3.6e-46
UNIPROTKB|F1SPY3	800	F1SPY3 "Uncharacterized protei	0.876	0.408	0.304	3.6e-46

UNIPROTKB|P08048 ZFY "Zinc finger Y-chromosomal protein" [Homo sapiens (taxid:9606)]

 Score = 490 (177.5 bits), Expect = 6.8e-48, Sum P(2) = 6.8e-48
 Identities = 102/342 (29%), Positives = 167/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   469 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 526

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +L+KH+ R HT ++P+ C +C+Y+S    
Sbjct:   527 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHM-RIHTGEKPYQCQYCEYRSADSS 585

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L +HQ     QC  CD +    ++
Sbjct:   586 NLKTHIKTKHSK-EMPFKCDICLLTFSDTKEVQQHTL-VHQESKTHQCLHCDHKSSNSSD 643

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+  +H+   +  + C +CD+  +   +
Sbjct:   644 LKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVA-VHKG--KKMHQCRHCDFKIADPFV 700

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   701 LSRHILSVHT--KDLPFRCKRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASG 757

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   758 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 799

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-070705-205 si:ch73-138e16.6 "si:ch73-138e16.6" [Danio rerio (taxid:7955)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 111/320 (34%), Positives = 166/320 (51%)

Query:    26 FICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC 85
             F+C  C+       ++  HL  H  +K + C  CE +      ++ H  +IH  ++  +C
Sbjct:   155 FMCFACDKAFLTAGHLKRHLMIHTGEKPYKCSHCEMRFTRTESMKAHE-RIHTGEKPYKC 213

Query:    86 SLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCT 145
             S CD  FS +  LK H +R HT ++PF C+FC         + +H  R H+ G+KP+ C+
Sbjct:   214 SHCDMGFSRSESLKMH-ERIHTGEKPFKCSFCIMTFSRSESLKTHE-RIHT-GEKPYGCS 270

Query:   146 ICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLC 205
              C+S +    +LK H  +IH G+  +QCS+C++RF        H + H T EKPFKC  C
Sbjct:   271 YCDSRFNLAKDLKIHE-RIHTGEKPYQCSYCEKRFSQLQNLKTHEMSH-TGEKPFKCAFC 328

Query:   206 SYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCE 265
               +  R+  LK H +RIH    +  Y C+YC+   S    LK H  + H  +  KPFTC+
Sbjct:   329 EKQFTRSESLKAH-MRIHIG--DKPYSCSYCESTFSLSRDLKIH-ERTHTGE--KPFTCD 382

Query:   266 HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCE--YKCTTKFGLKSHVTRIHSNQK-YFCG 322
             HC   F +  ++K HM   H      KC  C+  Y C +K  LK+H+ R+H+ +K + C 
Sbjct:   383 HCLKSFSQLSNLKQHMI-VHTRENAHKCDQCDEAYSCASK--LKAHL-RVHTREKPHSCS 438

Query:   323 SCNFSCTSNTDLLEHVQTNH 342
              C  S T   DL EH Q +H
Sbjct:   439 ECGQSFTLMYDLTEH-QKSH 457

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1M952 Zfx "Protein Zfx" [Rattus norvegicus (taxid:10116)]

 Score = 490 (177.5 bits), Expect = 2.2e-46, P = 2.2e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   416 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 473

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   474 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYECQYCEYRSADSS 532

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   533 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 590

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   591 LKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 647

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   648 LSRHILSVHT--KDLPFRCKRCRKGFRQQSELKKHM-KTHSGRKVYQCEYCEYSTTDASG 704

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   705 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 746

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E9PEP7 ZFX "Zinc finger X-chromosomal protein" [Homo sapiens (taxid:9606)]

 Score = 490 (177.5 bits), Expect = 2.4e-46, P = 2.4e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   423 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 480

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   481 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSS 539

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   540 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 597

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   598 LKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 654

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   655 LSRHILSVHT--KDLPFRCKRCRKGFRQQSELKKHM-KTHSGRKVYQCEYCEYSTTDASG 711

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   712 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 753

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

ZFIN|ZDB-GENE-071004-66 zgc:173816 "zgc:173816" [Danio rerio (taxid:7955)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 113/325 (34%), Positives = 166/325 (51%)

Query:    22 DSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQR 81
             D  +F C  C       +++ +H+  H  +K F+C  C           +HM +IH  ++
Sbjct:     5 DRNDFTCSQCGKSLRGKQSLKIHMRIHTGEKPFTCTQCGKSCRDLSNHNKHM-RIHTGEK 63

Query:    82 NLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---G 138
               +C  C  TF    +LK H+ R HT ++P+SC+ C  KS T+      +LR H K   G
Sbjct:    64 THKCDQCGKTFLRASELKNHL-RVHTKEKPYSCSECG-KSFTQQT----NLRTHQKIHTG 117

Query:   139 DKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEK 198
              K + C  CE T++T VELK H +  H G+  ++CS C++RF        H   +HT EK
Sbjct:   118 VKEYLCFECEKTFITAVELKRHQMN-HTGEKPYKCSHCNKRFSHTGHLKTHE-RNHTGEK 175

Query:   199 PFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDE 258
             P+KC+ C  +  ++  LK+H  RIH    E  Y C++CD   S    LK H  + H  + 
Sbjct:   176 PYKCSHCDKRFSQSENLKRHE-RIHTG--EKPYKCSHCDKRFSQPENLKRH-ERIHTGE- 230

Query:   259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
              KP+ C HCD +F    DMK H  R H G KP+ CS C+ + +    LK+H  RIH+ +K
Sbjct:   231 -KPYKCSHCDKRFSVSGDMKRH-ERIHTGEKPYMCSHCDKRFSHTGHLKTH-ERIHTGEK 287

Query:   319 -YFCGSCN--FSCTSNTDLLEHVQT 340
              Y C  C+  FS  +N    E + T
Sbjct:   288 PYTCSHCDKRFSQPANLKTHERIHT 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1MPG2 ZFX "Zinc finger X-chromosomal protein" [Bos taurus (taxid:9913)]

 Score = 490 (177.5 bits), Expect = 3.5e-46, P = 3.5e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   467 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 524

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   525 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSS 583

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   584 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 641

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   642 LKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 698

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   699 LSRHILSVHT--KDLPFRCKRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASG 755

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   756 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 797

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1LMV1 Zfx "Protein Zfx" [Rattus norvegicus (taxid:10116)]

 Score = 490 (177.5 bits), Expect = 3.5e-46, P = 3.5e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   467 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 524

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   525 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYECQYCEYRSADSS 583

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   584 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 641

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   642 LKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 698

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   699 LSRHILSVHT--KDLPFRCKRCRKGFRQQSELKKHM-KTHSGRKVYQCEYCEYSTTDASG 755

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   756 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 797

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|O62836 ZFX "Zinc finger X-chromosomal protein" [Bos taurus (taxid:9913)]

 Score = 490 (177.5 bits), Expect = 3.6e-46, P = 3.6e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   468 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 525

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   526 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSS 584

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   585 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 642

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   643 LKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 699

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   700 LSRHILSVHT--KDLPFRCKRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASG 756

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   757 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 798

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PB02 LOC100856749 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 490 (177.5 bits), Expect = 3.6e-46, P = 3.6e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   468 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 525

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   526 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSS 584

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   585 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 642

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   643 LKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 699

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   700 LSRHILSVHT--KDLPFRCKRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASG 756

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   757 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 798

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1SPY3 F1SPY3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 490 (177.5 bits), Expect = 3.6e-46, P = 3.6e-46
 Identities = 104/342 (30%), Positives = 166/342 (48%)

Query:     9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ---KLFSCDLCEYQTNT 65
             NH       S+ + +    C  C  H  +   ++ H   H E+   K+  C  CEY+T  
Sbjct:   468 NHLESHKLTSKAEKAIE--CDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAE 525

Query:    66 KIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKY 125
             +  + RH+L +H +     C  C   F    +LKKH+ R HT ++P+ C +C+Y+S    
Sbjct:   526 QGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHM-RIHTGEKPYQCQYCEYRSADSS 584

Query:   126 DITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
             ++ +H   KHSK + P KC IC  T+    E++ H L IHQ     QC  CD +    ++
Sbjct:   585 NLKTHVKTKHSK-EMPFKCDICLLTFSDTKEVQQHAL-IHQESKTHQCLHCDHKSSNSSD 642

Query:   186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
               +H +  HT + P KC +C     R  ELK+H+   H+   +  + C +CD+  +   +
Sbjct:   643 LKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAA-HKG--KKMHQCRHCDFKIADPFV 699

Query:   246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
             L  HI   H   +D PF C+ C   F ++ ++K HM + H G K ++C +CEY  T   G
Sbjct:   700 LSRHILSVHT--KDLPFRCKRCRKGFRQQNELKKHM-KTHSGRKVYQCEYCEYSTTDASG 756

Query:   306 LKSHVTRIHSNQ-KYFCGSCNFSCTSNTDLLEHVQTNHIIVG 346
              K HV  IH+    + C  C       ++  +H+  +H  VG
Sbjct:   757 FKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVG 798

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	373
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.003

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 127 ITSHSLRKHSKGDKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKN 184
           I + S     K  KP+KC +  C   Y  +  LK H+L  HQ Q   +    ++   F  
Sbjct: 335 IDTPSRMLKVKDGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSA 394

Query: 185 ECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
           +           +KP++C +C  + K    LK H    H
Sbjct: 395 K-----------DKPYRCEVCDKRYKNLNGLKYHRKHSH 422

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
KOG3608|consensus	467		99.94
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.94
KOG1074|consensus	958		99.93
KOG1074|consensus	958		99.92
KOG2462|consensus	279		99.91
KOG3623|consensus	1007		99.86
KOG3623|consensus	1007		99.85
KOG3576|consensus	267		99.64
KOG3576|consensus	267		99.56
PLN03086	567	PRLI-interacting factor K; Provisional	99.23
PHA00733	128	hypothetical protein	99.17
PLN03086	567	PRLI-interacting factor K; Provisional	99.05
PHA00733	128	hypothetical protein	99.05
KOG3993|consensus	500		98.82
PHA02768	55	hypothetical protein; Provisional	98.79
KOG3993|consensus	500		98.68
PHA02768	55	hypothetical protein; Provisional	98.65
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.42
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.39
PHA00732	79	hypothetical protein	98.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.23
KOG1146|consensus	1406		98.22
PHA00616	44	hypothetical protein	98.21
PHA00732	79	hypothetical protein	98.18
PHA00616	44	hypothetical protein	98.13
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.05
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.86
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.76
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.73
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.6
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.59
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.46
KOG1146|consensus	1406		97.43
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.37
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.36
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.32
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.31
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.13
KOG2482|consensus	423		96.83
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.75
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.75
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.68
smart00355	26	ZnF_C2H2 zinc finger.	96.55
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.45
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.43
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.35
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.17
KOG2482|consensus	423		96.17
smart00355	26	ZnF_C2H2 zinc finger.	96.13
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.02
KOG2231|consensus	669		95.87
PRK04860	160	hypothetical protein; Provisional	95.83
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.35
PRK04860	160	hypothetical protein; Provisional	94.67
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.59
KOG4173|consensus	253		94.21
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.62
KOG2785|consensus	390		93.48
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.43
KOG2231|consensus	669		93.17
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.16
KOG2785|consensus	390		93.14
KOG4173|consensus	253		92.78
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.47
KOG2893|consensus	341		91.6
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	90.87
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	90.46
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	90.28
COG5048	467	FOG: Zn-finger [General function prediction only]	88.88
KOG2893|consensus	341		88.86
COG4049	65	Uncharacterized protein containing archaeal-type C	88.78
COG4049	65	Uncharacterized protein containing archaeal-type C	88.3
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	87.61
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.28
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.17
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	85.25
PHA00626	59	hypothetical protein	85.25
COG5048	467	FOG: Zn-finger [General function prediction only]	84.26
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	83.78
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.77
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	83.24
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	83.14
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.81
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	82.76
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	81.91
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	81.8
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	80.56
COG1592	166	Rubrerythrin [Energy production and conversion]	80.43

>KOG3608|consensus

Probab=99.94  E-value=4.7e-27  Score=193.62  Aligned_cols=226  Identities=27%  Similarity=0.564  Sum_probs=194.3

Q ss_pred             ccc--CCCCccccChHHHHHhhhcccCC-----------CC-CCcc--cccccccccCHHHHHHHHhhhccCCCceeccc
Q psy10075        112 FSC--NFCDYKSKTKYDITSHSLRKHSK-----------GD-KPHK--CTICESTYLTKVELKNHILKIHQGQTRFQCSF  175 (373)
Q Consensus       112 ~~C--~~C~~~f~~~~~l~~h~~~~h~~-----------~~-~~~~--C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~  175 (373)
                      |.|  ..|+..|.+...+.+|+ -.|..           ++ ..+.  +..|-+.+.++..|+.|+ +.|++++...|+.
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV-~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~  212 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHV-VKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACPH  212 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHH-HHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecch
Confidence            455  45888888888888883 23321           22 2233  456999999999999997 8999999999999


Q ss_pred             ccccccchhHHHhhhhhcc-CCCCccccCCCchhccCcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhhhhhccC
Q psy10075        176 CDRRFYFKNECTKHYLEHH-TNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKH  254 (373)
Q Consensus       176 C~~~f~~~~~l~~H~~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  254 (373)
                      ||..|..+..|..|.++.. ....+|+|..|.+.|.+...|..|+ +.|    ..-|+|+.|..+....++|..|++..|
T Consensus       213 Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv-~rH----vn~ykCplCdmtc~~~ssL~~H~r~rH  287 (467)
T KOG3608|consen  213 CGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHV-VRH----VNCYKCPLCDMTCSSASSLTTHIRYRH  287 (467)
T ss_pred             HHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHH-HHh----hhcccccccccCCCChHHHHHHHHhhh
Confidence            9999999999999975543 3457999999999999999999998 666    457999999999999999999998888


Q ss_pred             CCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCC-Cc--ccCCCCCCCcc
Q psy10075        255 ANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSN-QK--YFCGSCNFSCT  329 (373)
Q Consensus       255 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~-~~--~~C~~C~~~f~  329 (373)
                      ..  ++||+|..|++.|.+.+.|..|+ ..|. +..|+|..  |.+.|.+..+|++|++.+|.+ .+  |.|..|++-|.
T Consensus       288 s~--dkpfKCd~Cd~~c~~esdL~kH~-~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft  363 (467)
T KOG3608|consen  288 SK--DKPFKCDECDTRCVRESDLAKHV-QVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFT  363 (467)
T ss_pred             cc--CCCccccchhhhhccHHHHHHHH-Hhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhc
Confidence            76  99999999999999999999999 7888 77899999  999999999999999999843 33  99999999999


Q ss_pred             ChhHHHHHHHhhccccccc
Q psy10075        330 SNTDLLEHVQTNHIIVGES  348 (373)
Q Consensus       330 ~~~~l~~H~~~~H~~~~~~  348 (373)
                      +..+|..|++..|++..+.
T Consensus       364 ~G~~L~~HL~kkH~f~~Ps  382 (467)
T KOG3608|consen  364 SGKSLSAHLMKKHGFRLPS  382 (467)
T ss_pred             cchhHHHHHHHhhcccCCC
Confidence            9999999999999865543

>KOG2462|consensus

Probab=99.94  E-value=2.1e-27  Score=190.93  Aligned_cols=140  Identities=24%  Similarity=0.505  Sum_probs=125.7

Q ss_pred             CCCccccCCCchhccCcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChh
Q psy10075        196 NEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKY  275 (373)
Q Consensus       196 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~  275 (373)
                      ....|+|+.||+.+.+.++|.+|.+..-.....+.+.|+.|++.|.+...|..|++++.     -+..|.+|||.|...+
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-----l~c~C~iCGKaFSRPW  201 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-----LPCECGICGKAFSRPW  201 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-----CCcccccccccccchH
Confidence            44678999999999999999999744444455778999999999999999999996443     4689999999999999


Q ss_pred             HHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        276 DMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       276 ~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      .|+-|+ +.|+||+||.|+.|++.|.++++|+.||++|-+.++|+|+.|++.|....-|-+|...-
T Consensus       202 LLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  202 LLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             Hhhccc-ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            999999 99999999999999999999999999999999999999999999999999999997653

>KOG3608|consensus

Probab=99.94  E-value=2.8e-26  Score=189.04  Aligned_cols=257  Identities=25%  Similarity=0.536  Sum_probs=189.2

Q ss_pred             ceecCC--CCccccC-hhhHhhccccCCC----------------------------------CCcccc--CcCcccccc
Q psy10075         25 NFICIL--CNYHAEN-FENIYLHLPSHFE----------------------------------QKLFSC--DLCEYQTNT   65 (373)
Q Consensus        25 ~~~C~~--C~~~f~~-~~~l~~H~~~h~~----------------------------------~~~~~C--~~C~~~f~~   65 (373)
                      .+.|..  |++...+ ...|.+|+..|.=                                  ...|.|  ..|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            567754  8877655 5789999876630                                  012445  458888888


Q ss_pred             hHHHHHHhhhhhcc------------C-CccccCc--cccccCCchHHHHHHhhhcCCCCCcccCCCCccccChHHHHHh
Q psy10075         66 KIYIRRHMLKIHLR------------Q-RNLECSL--CDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSH  130 (373)
Q Consensus        66 ~~~l~~H~~~~h~~------------~-~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h  130 (373)
                      ...+..|+ ..|+-            + ..+.|..  |-+.+.++..|+.|+ +.|++++...|+.|+.-|.+...|.+|
T Consensus       149 ~~ef~dHV-~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~Cg~~F~~~tkl~DH  226 (467)
T KOG3608|consen  149 IVEFQDHV-VKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACPHCGELFRTKTKLFDH  226 (467)
T ss_pred             HHHHHHHH-HHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecchHHHHhccccHHHHH
Confidence            88888884 44421            1 2355644  777788888888884 778888888888888888888888888


Q ss_pred             hhcccCCCCCCcccccccccccCHHHHHHHHhhhccCCCceecccccccccchhHHHhhhhhccCCCCccccCCCchhcc
Q psy10075        131 SLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAK  210 (373)
Q Consensus       131 ~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~  210 (373)
                      +++.......+|.|..|.+.|.+...|..|+ ..|  ..-|+|+.|+.+....++|..|+...|..++||+|..|++.+.
T Consensus       227 ~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv-~rH--vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~  303 (467)
T KOG3608|consen  227 LRRQTELNTNSFQCAQCFKRFATEKLLKSHV-VRH--VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCV  303 (467)
T ss_pred             HHhhhhhcCCchHHHHHHHHHhHHHHHHHHH-HHh--hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhc
Confidence            7776666667888888888888888888886 555  4567888888888888888888877788888888888888888


Q ss_pred             CcHHHHHHHHHhcCCCCccceecCC--CcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        211 RNFELKQHILRIHQDNIEAEYHCTY--CDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       211 ~~~~l~~H~~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +.++|.+|+ ..|.   +..|.|+.  |...+.+...+..|+.++|.+....+|.|-.|++.|++-.+|..|+.+.|.-.
T Consensus       304 ~esdL~kH~-~~HS---~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  304 RESDLAKHV-QVHS---KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             cHHHHHHHH-Hhcc---ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhccc
Confidence            888888887 4665   45677766  88888888888888877777777777888888888888888888876666544


Q ss_pred             CC
Q psy10075        289 KP  290 (373)
Q Consensus       289 ~~  290 (373)
                      .|
T Consensus       380 ~P  381 (467)
T KOG3608|consen  380 LP  381 (467)
T ss_pred             CC
Confidence            33

>KOG1074|consensus

Probab=99.93  E-value=4.6e-27  Score=213.88  Aligned_cols=200  Identities=25%  Similarity=0.488  Sum_probs=153.5

Q ss_pred             CCcccccccccccCHHHHHHHHhhhccCCCceecccccccccchhHHHhhhhhccCC----CCccccC---CCchhccCc
Q psy10075        140 KPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN----EKPFKCT---LCSYKAKRN  212 (373)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~----~~~~~C~---~C~~~f~~~  212 (373)
                      .+..|-.|.++..-..+|+.|. +.|+|++||+|.+||+.|..+.+|..|+ ..|..    ..++.||   +|.+.|...
T Consensus       604 dPNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             Cccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhccccccc
Confidence            4678999999999999999998 8999999999999999999999999997 44433    3568899   999999999


Q ss_pred             HHHHHHHHHhcCCC-----------CccceecCCCcccccChHHHhhhhhccCCC-------------CCC----CCeec
Q psy10075        213 FELKQHILRIHQDN-----------IEAEYHCTYCDYICSSRTILKSHINKKHAN-------------DED----KPFTC  264 (373)
Q Consensus       213 ~~l~~H~~~~h~~~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-------------~~~----~~~~C  264 (373)
                      ..|..|+ +.|...           ....-.|..|.+.|.+...+..++..+-..             .++    .+..+
T Consensus       682 V~lpQhI-riH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e  760 (958)
T KOG1074|consen  682 VTLPQHI-RIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPE  760 (958)
T ss_pred             ccccceE-EeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccc
Confidence            9999998 777521           112357899999998888888777443110             011    13556


Q ss_pred             CCCCccccChhHHHHhhhhh----------------------ccCCC---------------------------------
Q psy10075        265 EHCDSKFCKKYDMKMHMSRA----------------------HYGLK---------------------------------  289 (373)
Q Consensus       265 ~~C~~~f~~~~~L~~H~~~~----------------------H~~~~---------------------------------  289 (373)
                      ..|+..+.....+..+-...                      +++++                                 
T Consensus       761 ~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg  840 (958)
T KOG1074|consen  761 NSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEG  840 (958)
T ss_pred             cccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccc
Confidence            66776665554443332100                      00000                                 


Q ss_pred             --------------------------------------CccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccCh
Q psy10075        290 --------------------------------------PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSN  331 (373)
Q Consensus       290 --------------------------------------~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~  331 (373)
                                                            .-.|..|++.|.+.++|..|+++|.++++|.|.+|++.|..+
T Consensus       841 ~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttr  920 (958)
T KOG1074|consen  841 LATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTR  920 (958)
T ss_pred             cccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhh
Confidence                                                  056999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhhc
Q psy10075        332 TDLLEHVQTNH  342 (373)
Q Consensus       332 ~~l~~H~~~~H  342 (373)
                      .+|++||.+|+
T Consensus       921 gnLKvHMgtH~  931 (958)
T KOG1074|consen  921 GNLKVHMGTHM  931 (958)
T ss_pred             hhhhhhhcccc
Confidence            99999999997

>KOG1074|consensus

Probab=99.92  E-value=2.1e-26  Score=209.54  Aligned_cols=48  Identities=35%  Similarity=0.768  Sum_probs=40.0

Q ss_pred             cccCccccccCCchHHHHHHhhhcCCCCCcccCCCCccccChHHHHHhh
Q psy10075         83 LECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHS  131 (373)
Q Consensus        83 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~  131 (373)
                      .+|..|.+.|...+.|+.| .++|++++||+|.+|+..|.++.+|+.|.
T Consensus       354 hkCr~CakvfgS~SaLqiH-lRSHTGERPfqCnvCG~~FSTkGNLKvH~  401 (958)
T KOG1074|consen  354 HKCRFCAKVFGSDSALQIH-LRSHTGERPFQCNVCGNRFSTKGNLKVHF  401 (958)
T ss_pred             chhhhhHhhcCchhhhhhh-hhccCCCCCeeecccccccccccceeeee
Confidence            5688888888888888888 47888888888888888888888888883

>KOG2462|consensus

Probab=99.91  E-value=3.1e-25  Score=178.49  Aligned_cols=126  Identities=23%  Similarity=0.507  Sum_probs=117.1

Q ss_pred             ccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhh
Q psy10075        228 EAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLK  307 (373)
Q Consensus       228 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  307 (373)
                      ...|.|++||+.+.+.++|.+|.+.+-..+..+.+.|+.|++.|.....|.+|+ ++|+  -+.+|.+||+.|...=-|.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHh-hccC--CCcccccccccccchHHhh
Confidence            456999999999999999999998888888888999999999999999999999 8886  6799999999999999999


Q ss_pred             hhhhhccCCCcccCCCCCCCccChhHHHHHHHhhcccccccccchhHHHHHHHhhhhHhhhccccC
Q psy10075        308 SHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSSRDFIIHSFVKNAMYHCQITLNAF  373 (373)
Q Consensus       308 ~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  373 (373)
                      -|+++|.|++||.|+.|++.|.++.||+.||++|   .+              .+.|+|+.|+|+|
T Consensus       205 GHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTH---S~--------------~K~~qC~~C~KsF  253 (279)
T KOG2462|consen  205 GHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTH---SD--------------VKKHQCPRCGKSF  253 (279)
T ss_pred             cccccccCCCCccCCcccchhcchHHHHHHHHhh---cC--------------CccccCcchhhHH
Confidence            9999999999999999999999999999999999   32              3579999999998

>KOG3623|consensus

Probab=99.86  E-value=2.3e-22  Score=180.59  Aligned_cols=107  Identities=28%  Similarity=0.597  Sum_probs=90.9

Q ss_pred             CcceecCCCCccccChhhHhhccc-cCC-CCCccccCcCcccccchHHHHHHhhhhhcc-------------CCccccCc
Q psy10075         23 SYNFICILCNYHAENFENIYLHLP-SHF-EQKLFSCDLCEYQTNTKIYIRRHMLKIHLR-------------QRNLECSL   87 (373)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-------------~~~~~C~~   87 (373)
                      ...+.|+.|.+.+.....|..|++ .|. .+..|.|..|..+|..+..|.+|| ..|..             .+.|+|..
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCtE  286 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCTE  286 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhccccccc
Confidence            345789999999999999999965 333 345699999999999999999996 45522             35699999


Q ss_pred             cccccCCchHHHHHHhhhcCCCCCcccCCCCccccChHHHHHhh
Q psy10075         88 CDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHS  131 (373)
Q Consensus        88 C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~  131 (373)
                      |++.|..+..|..|+ ++|.|++||.|+.|.+.|.....+..||
T Consensus       287 CgKAFKfKHHLKEHl-RIHSGEKPfeCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  287 CGKAFKFKHHLKEHL-RIHSGEKPFECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             cchhhhhHHHHHhhh-eeecCCCCcCCcccccccccCCcccccc
Confidence            999999999999995 8999999999999999999999999994

>KOG3623|consensus

Probab=99.85  E-value=2.5e-22  Score=180.35  Aligned_cols=78  Identities=22%  Similarity=0.554  Sum_probs=75.2

Q ss_pred             eecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQT  340 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  340 (373)
                      |.|..|+|+|...+.|.+|. ..|+|.+||+|.+|.+.|..+..|..|.+.|-|+++|+|..|++.|......-.||.-
T Consensus       895 yaCDqCDK~FqKqSSLaRHK-YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHK-YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhh-hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhcc
Confidence            99999999999999999999 9999999999999999999999999999999999999999999999999999999763

>KOG3576|consensus

Probab=99.64  E-value=7.1e-17  Score=123.61  Aligned_cols=114  Identities=28%  Similarity=0.660  Sum_probs=87.7

Q ss_pred             cceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhh
Q psy10075        229 AEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKS  308 (373)
Q Consensus       229 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~  308 (373)
                      ..|.|.+|++.|.-.-.|.+|++- |  ...+.|.|..||+.|.....|.+|+ +.|++.+||+|..|++.|+.+-+|..
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kc-h--~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKC-H--SDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhh-c--cHHHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhHHHHhhccHHH
Confidence            346677777777666666666642 2  2256677888888888888888888 78888888888888888888888888


Q ss_pred             hhhhccCCC-----------cccCCCCCCCccChhHHHHHHHhhccccc
Q psy10075        309 HVTRIHSNQ-----------KYFCGSCNFSCTSNTDLLEHVQTNHIIVG  346 (373)
Q Consensus       309 H~~~~h~~~-----------~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  346 (373)
                      |++..|+..           .|.|..||+.-...+.+..|++.+|+...
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            887777643           39999999999999999999999987553

>KOG3576|consensus

Probab=99.56  E-value=1.2e-15  Score=117.02  Aligned_cols=131  Identities=22%  Similarity=0.377  Sum_probs=89.8

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDN   95 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~   95 (373)
                      .+....+...|.|.+|++.|.....|.+|++-|..-+.+-|.-||+.|+.-.+|.+| ...|.+-+||+|..|++.|..+
T Consensus       108 t~gsssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh-~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  108 TIGSSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRH-TRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             cccCCCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhh-hccccCccccchhhhhHHHHhh
Confidence            334444566677888888887777777888777777777777777777777777777 4677777777777777777777


Q ss_pred             hHHHHHHhhhcCCCCCcccCCCCccccChHHHHHhhhcccCCCCCCcccccccccccCHHHHHHHHhhhccC
Q psy10075         96 MDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQG  167 (373)
Q Consensus        96 ~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  167 (373)
                      -.|..|++.+|.....|             .+.+-       .++.|.|..||..-.....+..|+...|..
T Consensus       187 csleshl~kvhgv~~~y-------------ayker-------r~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  187 CSLESHLKKVHGVQHQY-------------AYKER-------RAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             ccHHHHHHHHcCchHHH-------------HHHHh-------hhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            77777777777543222             11111       345677777777777777777776444433

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.23  E-value=3.6e-11  Score=109.93  Aligned_cols=146  Identities=20%  Similarity=0.396  Sum_probs=108.4

Q ss_pred             eecccccccccchhHHHhhhhhccCCCCccccCC--CchhccCcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhh
Q psy10075        171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKS  248 (373)
Q Consensus       171 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  248 (373)
                      -.|+.|..... ...|..|. . +..-..-.|+.  |+..|.... +            ++.+.|+.|++.|. ...|..
T Consensus       408 V~C~NC~~~i~-l~~l~lHe-~-~C~r~~V~Cp~~~Cg~v~~r~e-l------------~~H~~C~~Cgk~f~-~s~Lek  470 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHE-A-YCSRHNVVCPHDGCGIVLRVEE-A------------KNHVHCEKCGQAFQ-QGEMEK  470 (567)
T ss_pred             EECCCCCCccc-hhHHHHHH-h-hCCCcceeCCcccccceeeccc-c------------ccCccCCCCCCccc-hHHHHH
Confidence            46888877766 44566774 3 34445566874  888773322 2            33458999999885 678899


Q ss_pred             hhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCccccc----------chhhhhhhhhhccCCCc
Q psy10075        249 HINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCT----------TKFGLKSHVTRIHSNQK  318 (373)
Q Consensus       249 H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~----------~~~~l~~H~~~~h~~~~  318 (373)
                      |+...|     .++.|+ ||+.+ ....|..|+ ..|...+++.|++|++.|.          ..+.|..|.. ..+..+
T Consensus       471 H~~~~H-----kpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~-~CG~rt  541 (567)
T PLN03086        471 HMKVFH-----EPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHES-ICGSRT  541 (567)
T ss_pred             HHHhcC-----CCccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHH-hcCCcc
Confidence            986543     579999 99765 668999998 7888899999999999884          1347889984 468888


Q ss_pred             ccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      +.|..||+.+.. ..|..|+...|.
T Consensus       542 ~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        542 APCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             eEccccCCeeee-hhHHHHHHHhhc
Confidence            999999988776 468888887764

>PHA00733 hypothetical protein

Probab=99.17  E-value=3.5e-11  Score=89.59  Aligned_cols=85  Identities=16%  Similarity=0.333  Sum_probs=62.1

Q ss_pred             CCCeecCCCCccccChhHHHHh--hh--hhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHH
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMH--MS--RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDL  334 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H--~~--~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l  334 (373)
                      .+++.|.+|+..|.....|..+  +.  ..+.+.+||.|+.|++.|.+...|..|++.+  ..+|.|..|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            5556666666666665555554  10  1333477888888888888888888888643  3458999999999999999


Q ss_pred             HHHHHhhcccc
Q psy10075        335 LEHVQTNHIIV  345 (373)
Q Consensus       335 ~~H~~~~H~~~  345 (373)
                      ..|+...|+|.
T Consensus       116 ~~H~~~~h~~~  126 (128)
T PHA00733        116 LDHVCKKHNIC  126 (128)
T ss_pred             HHHHHHhcCcc
Confidence            99999998864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.05  E-value=6e-10  Score=102.09  Aligned_cols=147  Identities=17%  Similarity=0.359  Sum_probs=106.2

Q ss_pred             CcccccccccccCHHHHHHHHhhhccCCCceeccc--ccccccchhHHHhhhhhccCCCCccccCCCchhccCcHHHHHH
Q psy10075        141 PHKCTICESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQH  218 (373)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  218 (373)
                      ...|+.|.+.... ..|..|.  .+.....-.|+.  |+..|. +..+..|          +.|+.|++.|. ...|..|
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe--~~C~r~~V~Cp~~~Cg~v~~-r~el~~H----------~~C~~Cgk~f~-~s~LekH  471 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHE--AYCSRHNVVCPHDGCGIVLR-VEEAKNH----------VHCEKCGQAFQ-QGEMEKH  471 (567)
T ss_pred             eEECCCCCCccch-hHHHHHH--hhCCCcceeCCcccccceee-ccccccC----------ccCCCCCCccc-hHHHHHH
Confidence            3578888876553 4566774  444455667874  888885 3333333          47999999985 5778999


Q ss_pred             HHHhcCCCCccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCcccc----------ChhHHHHhhhhhccCC
Q psy10075        219 ILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFC----------KKYDMKMHMSRAHYGL  288 (373)
Q Consensus       219 ~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~----------~~~~L~~H~~~~H~~~  288 (373)
                      +...|     .++.|+ ||+.+ .+..|..|+..   +-+.+++.|+.|++.|.          ....|..|. ... +.
T Consensus       472 ~~~~H-----kpv~Cp-Cg~~~-~R~~L~~H~~t---hCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE-~~C-G~  539 (567)
T PLN03086        472 MKVFH-----EPLQCP-CGVVL-EKEQMVQHQAS---TCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHE-SIC-GS  539 (567)
T ss_pred             HHhcC-----CCccCC-CCCCc-chhHHHhhhhc---cCCCCceeCCCCCCccccCccccchhhhhhhHHHHH-Hhc-CC
Confidence            85433     678999 99755 66899999742   23478999999999985          245899998 554 78


Q ss_pred             CCccCCCCcccccchhhhhhhhhhccC
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +++.|..|++.+ ....|..|+...|.
T Consensus       540 rt~~C~~Cgk~V-rlrdm~~H~~~~h~  565 (567)
T PLN03086        540 RTAPCDSCGRSV-MLKEMDIHQIAVHQ  565 (567)
T ss_pred             cceEccccCCee-eehhHHHHHHHhhc
Confidence            889999999987 46678888866654

>PHA00733 hypothetical protein

Probab=99.05  E-value=2e-10  Score=85.58  Aligned_cols=85  Identities=16%  Similarity=0.300  Sum_probs=61.1

Q ss_pred             ccceecCCCcccccChHHHhhh--hhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhh
Q psy10075        228 EAEYHCTYCDYICSSRTILKSH--INKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG  305 (373)
Q Consensus       228 ~~~~~C~~C~~~f~~~~~l~~H--~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~  305 (373)
                      .+++.|.+|+..|.+...|..+  +..+....+.+||.|+.|++.|.....|..|+ +.|  +.+|.|..|++.|.....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHI-RYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHH-hcC--CcCccCCCCCCccCCHHH
Confidence            5667777777777766666555  22222333477888888888888888888888 444  356888888888888888


Q ss_pred             hhhhhhhccC
Q psy10075        306 LKSHVTRIHS  315 (373)
Q Consensus       306 l~~H~~~~h~  315 (373)
                      |..|+...|+
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            8888866664

>KOG3993|consensus

Probab=98.82  E-value=2.5e-09  Score=91.76  Aligned_cols=53  Identities=13%  Similarity=0.051  Sum_probs=41.8

Q ss_pred             ccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        291 FKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      -.|++|+..+.++..=..+.+.-+..+.|.|.+|.-.|.+..+|..|+..-|.
T Consensus       431 ~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  431 ELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             cCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence            34777777777776666666556666779999999999999999999988774

>PHA02768 hypothetical protein; Provisional

Probab=98.79  E-value=2.6e-09  Score=64.97  Aligned_cols=44  Identities=23%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLK  307 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  307 (373)
                      .|.|+.||+.|+..+.|..|+ +.|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~-r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHL-RKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHH-HhcC--CcccCCcccceecccceeE
Confidence            477888888888888888888 5565  5788888888887666654

>KOG3993|consensus

Probab=98.68  E-value=5e-09  Score=89.98  Aligned_cols=198  Identities=16%  Similarity=0.223  Sum_probs=106.7

Q ss_pred             cccCCCCccccChHHHHHhhhcccCCCCCCcccccccccccCHHHHHHHHhhhccCCCceec-ccc-cccccchhHHHhh
Q psy10075        112 FSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQC-SFC-DRRFYFKNECTKH  189 (373)
Q Consensus       112 ~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C-~~C-~~~f~~~~~l~~H  189 (373)
                      |.|.+|...|.+...|..|  +.-..-...|+|++|+++|+-..+|..|. ++|-....-.= ..= .+.-.....+...
T Consensus       268 yiCqLCK~kYeD~F~LAQH--rC~RIV~vEYrCPEC~KVFsCPANLASHR-RWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQH--RCPRIVHVEYRCPECDKVFSCPANLASHR-RWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhc--cCCeeEEeeecCCcccccccCchhhhhhh-cccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            7777787777777777777  23222344577888888888777887774 66632211000 000 0000000000000


Q ss_pred             hhhc---cCCCCccccCCCchhccCcHHHHHHHHHhcCCCCccc--------------eecCCCcccccChHHHhhhhhc
Q psy10075        190 YLEH---HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAE--------------YHCTYCDYICSSRTILKSHINK  252 (373)
Q Consensus       190 ~~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~--------------~~C~~C~~~f~~~~~l~~H~~~  252 (373)
                       ...   ...+.-|.|.+|++.|++...|+.|+...|.....+.              +.+..+...+.....-..+. .
T Consensus       345 -a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~v-l  422 (500)
T KOG3993|consen  345 -AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEV-L  422 (500)
T ss_pred             -ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccce-e
Confidence             000   0223468899999999999999999755553321110              22333332222211111111 0


Q ss_pred             cCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCC
Q psy10075        253 KHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       253 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  316 (373)
                      .+... .....++.|+..+..+..=..+. +.-.....|.|.+|...|.+...|.+|+..-|..
T Consensus       423 ~~a~s-ael~~pp~~~~ppsss~~sgg~~-rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  423 YVAGS-AELELPPYDGSPPSSSGSSGGYG-RLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             eeecc-ccccCCCCCCCCcccCCCCCccc-cccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence            11111 12246788887777765544444 2223345689999999999999999999666643

>PHA02768 hypothetical protein; Provisional

Probab=98.65  E-value=1e-08  Score=62.40  Aligned_cols=44  Identities=9%  Similarity=0.319  Sum_probs=39.2

Q ss_pred             CccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHH
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLL  335 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~  335 (373)
                      -|.|+.||+.|+..++|..|+++|.  .+|+|..|++.|....+|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999998876  6899999999999877664

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.42  E-value=2.6e-07  Score=57.73  Aligned_cols=49  Identities=24%  Similarity=0.604  Sum_probs=29.8

Q ss_pred             ccCCCCcccccchhhhhhhhhhccCCCc--ccCCCCCCCccChhHHHHHHHhhc
Q psy10075        291 FKCSFCEYKCTTKFGLKSHVTRIHSNQK--YFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~--~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      |.||+|++. .+..+|..|+...|..+.  +.|++|...+.  .+|..|+..+|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            566666663 345666666666665432  66777766433  36777766665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.39  E-value=1.6e-07  Score=48.72  Aligned_cols=25  Identities=40%  Similarity=0.999  Sum_probs=20.3

Q ss_pred             HHHHhhhhhccCCCCccCCCCccccc
Q psy10075        276 DMKMHMSRAHYGLKPFKCSFCEYKCT  301 (373)
Q Consensus       276 ~L~~H~~~~H~~~~~~~C~~C~~~f~  301 (373)
                      +|..|+ +.|++++||.|+.|++.|.
T Consensus         1 ~l~~H~-~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHM-RTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHH-HHHSSSSSEEESSSSEEES
T ss_pred             CHHHHh-hhcCCCCCCCCCCCcCeeC
Confidence            477888 6788888888888888875

...

>PHA00732 hypothetical protein

Probab=98.24  E-value=9.1e-07  Score=59.55  Aligned_cols=44  Identities=27%  Similarity=0.531  Sum_probs=27.9

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  310 (373)
                      ||.|+.|++.|.+...|..|++..|.+   +.|+.|++.|.   .+..|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhh
Confidence            466777777777777777776334542   46777777764   466666

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.23  E-value=1.4e-06  Score=54.37  Aligned_cols=50  Identities=26%  Similarity=0.456  Sum_probs=28.5

Q ss_pred             eecCCCCccccChhHHHHhhhhhccCC-CCccCCCCcccccchhhhhhhhhhcc
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHYGL-KPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      |.||.|++ ..+...|..|....|..+ +.+.||+|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            56666666 334556666665555543 3466666665533  36666665554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG1146|consensus

Probab=98.22  E-value=1.2e-06  Score=86.16  Aligned_cols=101  Identities=21%  Similarity=0.357  Sum_probs=77.4

Q ss_pred             hhhhcccccce--eecCCCCcceecCCCCccccChhhHhhccccCC-------------------------CCCccccCc
Q psy10075          6 EILNHSRECAF--VSRLDDSYNFICILCNYHAENFENIYLHLPSHF-------------------------EQKLFSCDL   58 (373)
Q Consensus         6 ~~~~~~~~~~~--~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~~C~~   58 (373)
                      ..+.+.+....  +.+++-++.|+|+.|+..|...+.|..|++..+                         +.++|.|..
T Consensus       444 ~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~  523 (1406)
T KOG1146|consen  444 PLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRA  523 (1406)
T ss_pred             hhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCccccee
Confidence            34444555444  555666799999999999999999999998722                         236799999


Q ss_pred             CcccccchHHHHHHhhhh-hc-----------------------------------c------CCccccCccccccCCch
Q psy10075         59 CEYQTNTKIYIRRHMLKI-HL-----------------------------------R------QRNLECSLCDSTFSDNM   96 (373)
Q Consensus        59 C~~~f~~~~~l~~H~~~~-h~-----------------------------------~------~~~~~C~~C~~~f~~~~   96 (373)
                      |...+..+..|..|++.. |.                                   +      ...|.|..|+....-..
T Consensus       524 C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniar  603 (1406)
T KOG1146|consen  524 CNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIAR  603 (1406)
T ss_pred             eeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhh
Confidence            999999999999997432 20                                   0      12489999999988888


Q ss_pred             HHHHHHhhhc
Q psy10075         97 DLKKHIQRKH  106 (373)
Q Consensus        97 ~l~~H~~~~h  106 (373)
                      .|..||..++
T Consensus       604 nlrihmtss~  613 (1406)
T KOG1146|consen  604 NLRIHMTASP  613 (1406)
T ss_pred             ccccccccCC
Confidence            8988876554

>PHA00616 hypothetical protein

Probab=98.21  E-value=3.8e-07  Score=52.72  Aligned_cols=31  Identities=19%  Similarity=0.380  Sum_probs=15.4

Q ss_pred             eecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      |+|+.||+.|...++|..|+ +.|++++++.|
T Consensus         2 YqC~~CG~~F~~~s~l~~H~-r~~hg~~~~~~   32 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHL-LSVHKQNKLTL   32 (44)
T ss_pred             CccchhhHHHhhHHHHHHHH-HHhcCCCccce
Confidence            45555555555555555555 44444444444

>PHA00732 hypothetical protein

Probab=98.18  E-value=1.1e-06  Score=59.18  Aligned_cols=47  Identities=36%  Similarity=0.638  Sum_probs=40.1

Q ss_pred             CccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ||.|..|++.|.+.++|..|++.+|.+  +.|+.|++.|.   .+..|+.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--CccCCCCCEeC---Chhhhhccc
Confidence            589999999999999999999755543  58999999998   588888665

>PHA00616 hypothetical protein

Probab=98.13  E-value=9.2e-07  Score=51.13  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=28.8

Q ss_pred             CccCCCCcccccchhhhhhhhhhccCCCcccCC
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCG  322 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  322 (373)
                      ||+|+.||+.|..+++|..|++++|+..++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            688999999999999999999889988887765

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.05  E-value=1e-06  Score=45.63  Aligned_cols=17  Identities=24%  Similarity=0.782  Sum_probs=7.3

Q ss_pred             hhccCCccccCcccccc
Q psy10075         76 IHLRQRNLECSLCDSTF   92 (373)
Q Consensus        76 ~h~~~~~~~C~~C~~~f   92 (373)
                      .|.++++|.|+.|++.|
T Consensus         8 ~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    8 THTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHSSSSSEEESSSSEEE
T ss_pred             hcCCCCCCCCCCCcCee
Confidence            34444444444444443

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.86  E-value=7.8e-06  Score=58.93  Aligned_cols=73  Identities=23%  Similarity=0.346  Sum_probs=20.5

Q ss_pred             ecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        263 TCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       263 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      .|..|+..|.+...|..|+...|.-..+     ....+.....+..++. ......+.|.+|+..|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~-~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLR-KKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc-----cccccccccccccccc-cccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4788888888888888888667754432     1122234455555542 22233588999999999999999998865

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.76  E-value=1.6e-05  Score=40.34  Aligned_cols=24  Identities=33%  Similarity=0.693  Sum_probs=15.5

Q ss_pred             ccCCCCCCCccChhHHHHHHHhhc
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      |.|++|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            467777777777777777777664

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.73  E-value=1.3e-05  Score=40.27  Aligned_cols=22  Identities=32%  Similarity=0.637  Sum_probs=13.3

Q ss_pred             ccCCCCCCCccChhHHHHHHHh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQT  340 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~  340 (373)
                      |.|+.|++.|.++.+|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.60  E-value=4e-05  Score=38.45  Aligned_cols=20  Identities=35%  Similarity=0.851  Sum_probs=11.7

Q ss_pred             eecCCCCccccChhHHHHhh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~  281 (373)
                      |.|+.|++.|.+...|..|+
T Consensus         1 y~C~~C~~~f~~~~~l~~H~   20 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHM   20 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHH
Confidence            45555666666666666555

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.59  E-value=2.9e-05  Score=64.77  Aligned_cols=52  Identities=33%  Similarity=0.742  Sum_probs=39.8

Q ss_pred             CCCeecCC--CCccccChhHHHHhhhhhcc------------------CCCCccCCCCcccccchhhhhhhh
Q psy10075        259 DKPFTCEH--CDSKFCKKYDMKMHMSRAHY------------------GLKPFKCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       259 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~------------------~~~~~~C~~C~~~f~~~~~l~~H~  310 (373)
                      ++||+|++  |.|.|++...|..|+.--|-                  ..+||+|+.|++++.+...|+.|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            58999987  99999999999999854452                  236677777777777777777775

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.46  E-value=0.00011  Score=37.21  Aligned_cols=20  Identities=35%  Similarity=0.855  Sum_probs=9.1

Q ss_pred             eecCCCCccccChhHHHHhh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~  281 (373)
                      |.|++|++.|.+...|..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~   20 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHM   20 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHH
Confidence            34555555555555555554

...

>KOG1146|consensus

Probab=97.43  E-value=2.7e-05  Score=77.14  Aligned_cols=75  Identities=21%  Similarity=0.471  Sum_probs=48.3

Q ss_pred             cCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHHHHHHhhhcC------------------------CCCC
Q psy10075         56 CDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHT------------------------NDRP  111 (373)
Q Consensus        56 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~------------------------~~~~  111 (373)
                      |.-++..+.+...+.-|+...+...+.++|+.|++.|.....|..||+..|.                        +..+
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            3444455555555555555556666778888888888888888888766553                        2345


Q ss_pred             cccCCCCccccChHHHHHh
Q psy10075        112 FSCNFCDYKSKTKYDITSH  130 (373)
Q Consensus       112 ~~C~~C~~~f~~~~~l~~h  130 (373)
                      |.|..|...+....+|..|
T Consensus       519 ~~C~~C~~stttng~Lsih  537 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIH  537 (1406)
T ss_pred             ccceeeeeeeecchHHHHH
Confidence            6666666666666666666

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.37  E-value=0.00013  Score=52.50  Aligned_cols=22  Identities=27%  Similarity=0.711  Sum_probs=13.6

Q ss_pred             CeecCCCCccccChhHHHHhhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMS  282 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~  282 (373)
                      .+.|..|++.|.+...|..||+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHc
Confidence            4666666666666666666664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.36  E-value=7.1e-05  Score=39.20  Aligned_cols=24  Identities=25%  Similarity=0.512  Sum_probs=15.5

Q ss_pred             ccCCCCCCCccChhHHHHHHHhhc
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      |+|..|++.|.+..+|..|++.|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            566666666666666666666554

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.32  E-value=0.00014  Score=38.07  Aligned_cols=25  Identities=24%  Similarity=0.363  Sum_probs=18.1

Q ss_pred             ceecCCCCccccChhhHhhccccCC
Q psy10075         25 NFICILCNYHAENFENIYLHLPSHF   49 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~   49 (373)
                      ||.|..|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5677777777777777777776653

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.31  E-value=0.00014  Score=60.91  Aligned_cols=24  Identities=38%  Similarity=0.881  Sum_probs=22.2

Q ss_pred             CCCCeecCCCCccccChhHHHHhh
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      ..+||+|++|+|+|++...|..|+
T Consensus       395 ~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         395 KDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCCceeccccchhhccCccceecc
Confidence            469999999999999999999997

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.13  E-value=0.00025  Score=35.86  Aligned_cols=24  Identities=29%  Similarity=0.769  Sum_probs=14.5

Q ss_pred             ccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      |+|+.|++... +.+|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777776666 6677777766653

>KOG2482|consensus

Probab=96.83  E-value=0.0027  Score=53.98  Aligned_cols=185  Identities=16%  Similarity=0.234  Sum_probs=87.7

Q ss_pred             HHHHHHHhhhccCCCceeccccccccc-chhHHHhhhhhccCCC---------------------CccccCCCchhccCc
Q psy10075        155 VELKNHILKIHQGQTRFQCSFCDRRFY-FKNECTKHYLEHHTNE---------------------KPFKCTLCSYKAKRN  212 (373)
Q Consensus       155 ~~l~~H~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~~---------------------~~~~C~~C~~~f~~~  212 (373)
                      ..|+++.+..-......+|-.|...+. .++.+..|+...|.-.                     ..+.|-+|.+.|+.+
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdk  208 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDK  208 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCc
Confidence            345555432223345578888876654 5677777765554311                     236677777777777


Q ss_pred             HHHHHHHHHh-cCCCCccc------eecCC--Cccccc-ChHHH--------hhhhhccCC--CCCCCC--eecCCCCcc
Q psy10075        213 FELKQHILRI-HQDNIEAE------YHCTY--CDYICS-SRTIL--------KSHINKKHA--NDEDKP--FTCEHCDSK  270 (373)
Q Consensus       213 ~~l~~H~~~~-h~~~~~~~------~~C~~--C~~~f~-~~~~l--------~~H~~~~~~--~~~~~~--~~C~~C~~~  270 (373)
                      ..|+.||+.. |.....+.      |.=..  =|+... ..+.+        .++-..+..  ..+..+  ..|-.|...
T Consensus       209 ntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~  288 (423)
T KOG2482|consen  209 NTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNF  288 (423)
T ss_pred             HHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccc
Confidence            7777777432 21100100      11100  011110 00000        000000000  011112  578888888


Q ss_pred             ccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        271 FCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       271 f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ..+...|..||+.+|.-.---.=+-=+-.|..+-.+..=+++  ....-.|..|..+|..+..|+.||..+
T Consensus       289 ~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRk--q~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  289 YENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRK--QKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             hhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHH--HhhccccccccccccCcchhhhhcccc
Confidence            777888888887767321000000000111111112111111  111246888889999999999997743

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.75  E-value=0.002  Score=54.78  Aligned_cols=132  Identities=26%  Similarity=0.461  Sum_probs=78.1

Q ss_pred             cccCC--CchhccCcHHHHHHHHHhcCCCCccceecCCC---ccccc------ChHHHhhhhhccCCCCCCCCe-ecCCC
Q psy10075        200 FKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCTYC---DYICS------SRTILKSHINKKHANDEDKPF-TCEHC  267 (373)
Q Consensus       200 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C---~~~f~------~~~~l~~H~~~~~~~~~~~~~-~C~~C  267 (373)
                      |.||.  |......-..|..|....|..     +.|.+|   .+.|.      +...|..|...-..+.|-+.. .|..|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~-----~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF-----VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc-----EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc
Confidence            55554  444444445666666554432     555555   23333      344566665322222222222 58888


Q ss_pred             CccccChhHHHHhhhhhccCCCCccCCCCcc-------cccchhhhhhhhhhccCCCcccCCC--CC----CCccChhHH
Q psy10075        268 DSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY-------KCTTKFGLKSHVTRIHSNQKYFCGS--CN----FSCTSNTDL  334 (373)
Q Consensus       268 ~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~h~~~~~~C~~--C~----~~f~~~~~l  334 (373)
                      ...|..-..|..|++..|.     +|-+|.+       .|.+-.+|..|.+..|    |.|.+  |.    +.|+....|
T Consensus       227 ~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el  297 (493)
T COG5236         227 KIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTEL  297 (493)
T ss_pred             cceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHH
Confidence            8888888888888866662     2555543       5666678888874333    44442  32    568888899


Q ss_pred             HHHHHhhcccc
Q psy10075        335 LEHVQTNHIIV  345 (373)
Q Consensus       335 ~~H~~~~H~~~  345 (373)
                      ++|+...|++.
T Consensus       298 ~~h~~~~h~~~  308 (493)
T COG5236         298 LEHLTRFHKVN  308 (493)
T ss_pred             HHHHHHHhhcc
Confidence            99998888854

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.75  E-value=0.0009  Score=39.65  Aligned_cols=32  Identities=19%  Similarity=0.229  Sum_probs=18.5

Q ss_pred             CCcceecCCCCccccChhhHhhccccCCCCCc
Q psy10075         22 DSYNFICILCNYHAENFENIYLHLPSHFEQKL   53 (373)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   53 (373)
                      ++.|-+|++|+.+++...+|.+|+.+.++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            56677777777777777777777766555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.68  E-value=0.00081  Score=33.96  Aligned_cols=23  Identities=43%  Similarity=0.940  Sum_probs=10.4

Q ss_pred             ccCCCCcccccchhhhhhhhhhcc
Q psy10075        291 FKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      |+|+.|++... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555444 445555554443

>smart00355 ZnF_C2H2 zinc finger

Probab=96.55  E-value=0.0023  Score=32.70  Aligned_cols=23  Identities=35%  Similarity=0.639  Sum_probs=18.5

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57888888888888888888754

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.45  E-value=0.0012  Score=33.75  Aligned_cols=22  Identities=32%  Similarity=0.807  Sum_probs=15.2

Q ss_pred             ccCCCCCCCccChhHHHHHHHh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQT  340 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~  340 (373)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577777777777777777654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.43  E-value=0.0015  Score=38.74  Aligned_cols=22  Identities=23%  Similarity=0.644  Sum_probs=7.2

Q ss_pred             CCeecCCCCccccChhHHHHhh
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      .|-.|++|+..+.+..+|.+|+
T Consensus        23 ~PatCP~C~a~~~~srnLrRHl   44 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHL   44 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHH
T ss_pred             CCCCCCcchhhccchhhHHHHH
Confidence            3334444444444444444444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.35  E-value=0.0038  Score=53.15  Aligned_cols=132  Identities=21%  Similarity=0.426  Sum_probs=84.4

Q ss_pred             ceecCC--CCccccChhhHhhccccCCCCCccccCcCc---------ccccchHHHHHHhhhhhccCCc----cccCccc
Q psy10075         25 NFICIL--CNYHAENFENIYLHLPSHFEQKLFSCDLCE---------YQTNTKIYIRRHMLKIHLRQRN----LECSLCD   89 (373)
Q Consensus        25 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~l~~H~~~~h~~~~~----~~C~~C~   89 (373)
                      .|.|+.  |..+......|..|++..++  .+.|.+|-         ....+...|..| ...-..+..    -.|..|+
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H-~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDH-KNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeeccccccc-ccCCccccCcCCCchhhhcc
Confidence            366776  77777778888889876554  25565553         223566777888 333332322    4588999


Q ss_pred             cccCCchHHHHHHhhhcCCCCCcccCCCC----ccccChHHHHHhhhcccCCCCCCccccc--cc----ccccCHHHHHH
Q psy10075         90 STFSDNMDLKKHIQRKHTNDRPFSCNFCD----YKSKTKYDITSHSLRKHSKGDKPHKCTI--CE----STYLTKVELKN  159 (373)
Q Consensus        90 ~~f~~~~~l~~H~~~~h~~~~~~~C~~C~----~~f~~~~~l~~h~~~~h~~~~~~~~C~~--C~----~~f~~~~~l~~  159 (373)
                      ..|.+-..|..|++..|.  +-+.|+.-+    .-|.+...|..|....|      |.|..  |-    .+|.....|..
T Consensus       228 ~~FYdDDEL~~HcR~~HE--~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h------y~ct~qtc~~~k~~vf~~~~el~~  299 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE--ACHICDMVGPIRYQYFKSYEDLEAHFRNAH------YCCTFQTCRVGKCYVFPYHTELLE  299 (493)
T ss_pred             ceecChHHHHHHHHhhhh--hhhhhhccCccchhhhhCHHHHHHHhhcCc------eEEEEEEEecCcEEEeccHHHHHH
Confidence            999999999999877763  223333222    23777788888844333      44432  21    57888888888


Q ss_pred             HHhhhccC
Q psy10075        160 HILKIHQG  167 (373)
Q Consensus       160 H~~~~h~~  167 (373)
                      |+.+.|..
T Consensus       300 h~~~~h~~  307 (493)
T COG5236         300 HLTRFHKV  307 (493)
T ss_pred             HHHHHhhc
Confidence            88777743

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.17  E-value=0.0024  Score=32.54  Aligned_cols=22  Identities=32%  Similarity=0.564  Sum_probs=13.2

Q ss_pred             eecCCCCccccChhhHhhcccc
Q psy10075         26 FICILCNYHAENFENIYLHLPS   47 (373)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~   47 (373)
                      |.|++|+++|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666543

>KOG2482|consensus

Probab=96.17  E-value=0.0092  Score=50.85  Aligned_cols=149  Identities=19%  Similarity=0.297  Sum_probs=79.7

Q ss_pred             hhHHHhhhhhccCCCCccccCCCchhcc-CcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhhhhhccCCCCCCCC
Q psy10075        183 KNECTKHYLEHHTNEKPFKCTLCSYKAK-RNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKP  261 (373)
Q Consensus       183 ~~~l~~H~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  261 (373)
                      +..|..+++..-......+|-.|+..+. .++.+..|+-..|.-+...|-       .......|..|++..     -..
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpD-------niVyvnelLehLkek-----L~r  195 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPD-------NIVYVNELLEHLKEK-----LER  195 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCc-------ceeeHHHHHHHHHHH-----Hhh
Confidence            5677777766545556678999987654 456778888777765443331       111223445554321     123


Q ss_pred             eecCCCCccccChhHHHHhhhhh-ccCCCC--------ccCCC--Ccccccc-hhhhhhhhh-------------hccCC
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRA-HYGLKP--------FKCSF--CEYKCTT-KFGLKSHVT-------------RIHSN  316 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~-H~~~~~--------~~C~~--C~~~f~~-~~~l~~H~~-------------~~h~~  316 (373)
                      +.|-.|.+.|..+..|..||+.. |..-.|        |.=.+  =|++..- .+.+.+-..             ..++.
T Consensus       196 ~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a  275 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDA  275 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCC
Confidence            56777777777777777777432 322222        00000  0111110 011100000             00111


Q ss_pred             Cc--ccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        317 QK--YFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       317 ~~--~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      .+  .+|-.|.....+...|.+||+..|-
T Consensus       276 ~a~~v~CLfC~~~~en~~~l~eHmk~vHe  304 (423)
T KOG2482|consen  276 EALSVVCLFCTNFYENPVFLFEHMKIVHE  304 (423)
T ss_pred             CccceEEEeeccchhhHHHHHHHHHHHHH
Confidence            22  5888888888888888889888875

>smart00355 ZnF_C2H2 zinc finger

Probab=96.13  E-value=0.0046  Score=31.55  Aligned_cols=19  Identities=37%  Similarity=0.716  Sum_probs=9.9

Q ss_pred             ecCCCCccccChhHHHHhh
Q psy10075        263 TCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       263 ~C~~C~~~f~~~~~L~~H~  281 (373)
                      .|+.|++.|.....|..|+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        2 RCPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCCcchhCCHHHHHHHH
Confidence            4555555555555555555

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.02  E-value=0.0047  Score=32.14  Aligned_cols=22  Identities=23%  Similarity=0.428  Sum_probs=17.6

Q ss_pred             eecCCCCccccChhhHhhcccc
Q psy10075         26 FICILCNYHAENFENIYLHLPS   47 (373)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~   47 (373)
                      |.|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=95.87  E-value=0.022  Score=54.07  Aligned_cols=120  Identities=25%  Similarity=0.446  Sum_probs=60.9

Q ss_pred             eecccccccccchhHHHhhhhhccCCCCccccCCCchhccCcHHHHHHHHHhcCCCCccceecCCCc---cc------cc
Q psy10075        171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCD---YI------CS  241 (373)
Q Consensus       171 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~---~~------f~  241 (373)
                      +.|.+|++.+.-.        .     ..-.|..| -.|.+...|+.|+...|..     +.|..|-   +.      ..
T Consensus       100 ~~C~~C~~~~~~~--------~-----~~~~~~~c-~~~~s~~~Lk~H~~~~H~~-----~~c~lC~~~~kif~~e~k~Y  160 (669)
T KOG2231|consen  100 HSCHICDRRFRAL--------Y-----NKKECLHC-TEFKSVENLKNHMRDQHKL-----HLCSLCLQNLKIFINERKLY  160 (669)
T ss_pred             hhcCccccchhhh--------c-----ccCCCccc-cchhHHHHHHHHHHHhhhh-----hccccccccceeeeeeeehe
Confidence            6688887776411        0     01125555 5555666677776555533     3333331   11      12


Q ss_pred             ChHHHhhhhhccCC-CCCCCC-eecCCCCccccChhHHHHhhhhhccCCCCccCCCCc------ccccchhhhhhhhhhc
Q psy10075        242 SRTILKSHINKKHA-NDEDKP-FTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCE------YKCTTKFGLKSHVTRI  313 (373)
Q Consensus       242 ~~~~l~~H~~~~~~-~~~~~~-~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~------~~f~~~~~l~~H~~~~  313 (373)
                      +...|..|++.-.. ....+. -.|..|...|-....|..|++..|     |.|..|.      ..|.+-..|..|.+..
T Consensus       161 t~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  161 TRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             hHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhc
Confidence            44556666543222 111111 356677777777777777775555     4455552      2444556666666433


Q ss_pred             c
Q psy10075        314 H  314 (373)
Q Consensus       314 h  314 (373)
                      |
T Consensus       236 H  236 (669)
T KOG2231|consen  236 H  236 (669)
T ss_pred             C
Confidence            3

>PRK04860 hypothetical protein; Provisional

Probab=95.83  E-value=0.0056  Score=47.57  Aligned_cols=39  Identities=23%  Similarity=0.575  Sum_probs=29.7

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKF  304 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~  304 (373)
                      +|.|. |+.   ....+..|. ++|+++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEEec
Confidence            58887 876   666778888 8888888888888888776443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.35  E-value=0.0095  Score=30.96  Aligned_cols=19  Identities=26%  Similarity=0.560  Sum_probs=8.1

Q ss_pred             cCCCCcccccchhhhhhhh
Q psy10075        292 KCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       292 ~C~~C~~~f~~~~~l~~H~  310 (373)
                      .|..|++.|.+...+..|+
T Consensus         3 ~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    3 YCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             BBTTTTBBBSSHHHHHCCT
T ss_pred             CcccCCCCcCCHHHHHHHH
Confidence            3444444444444444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.67  E-value=0.014  Score=45.47  Aligned_cols=40  Identities=18%  Similarity=0.543  Sum_probs=34.2

Q ss_pred             CCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChh
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNT  332 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~  332 (373)
                      -+|.|. |+.   ....+.+|.+.+.++.+|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            479998 987   6788999998888889999999999887543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.59  E-value=0.034  Score=28.24  Aligned_cols=19  Identities=21%  Similarity=0.352  Sum_probs=10.8

Q ss_pred             cCCCCCCCccChhHHHHHHH
Q psy10075        320 FCGSCNFSCTSNTDLLEHVQ  339 (373)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~  339 (373)
                      .|++||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 4455655543

>KOG4173|consensus

Probab=94.21  E-value=0.012  Score=46.40  Aligned_cols=83  Identities=25%  Similarity=0.508  Sum_probs=43.9

Q ss_pred             ccccCC--CchhccCcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhhhhhccCC-------CCCCCCeecCC--C
Q psy10075        199 PFKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHA-------NDEDKPFTCEH--C  267 (373)
Q Consensus       199 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-------~~~~~~~~C~~--C  267 (373)
                      .+.|++  |...|.+......|....|.+      .|..|.+.|.+.--|..|+.++|.       ..|...|.|-+  |
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            355554  555555555555555444433      566666666666666666554442       12344455532  6


Q ss_pred             CccccChhHHHHhhhhhccC
Q psy10075        268 DSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       268 ~~~f~~~~~L~~H~~~~H~~  287 (373)
                      +..|.+...-..|+-..|.-
T Consensus       153 t~KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhhhhhhHHHHhccC
Confidence            66666655555555445543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.62  E-value=0.095  Score=38.16  Aligned_cols=25  Identities=24%  Similarity=0.549  Sum_probs=21.1

Q ss_pred             ccC----CCCCCCccChhHHHHHHHhhcc
Q psy10075        319 YFC----GSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       319 ~~C----~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      |.|    ..|++...+...+.+|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            888    8888888888888888888874

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=93.48  E-value=0.14  Score=44.90  Aligned_cols=22  Identities=18%  Similarity=0.403  Sum_probs=18.9

Q ss_pred             CcccccccccccCHHHHHHHHh
Q psy10075        141 PHKCTICESTYLTKVELKNHIL  162 (373)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~  162 (373)
                      .|.|..|...|.+...-+.|++
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyK   24 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYK   24 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhh
Confidence            5889999999999888888874

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.43  E-value=0.054  Score=30.04  Aligned_cols=21  Identities=33%  Similarity=0.592  Sum_probs=11.6

Q ss_pred             ceecCCCCccccChhhHhhcc
Q psy10075         25 NFICILCNYHAENFENIYLHL   45 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~   45 (373)
                      +|.|++|++.|.+...+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            455555555555555555554

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231|consensus

Probab=93.17  E-value=0.25  Score=47.26  Aligned_cols=19  Identities=26%  Similarity=0.553  Sum_probs=9.7

Q ss_pred             cCCCchhccCcHHHHHHHH
Q psy10075        202 CTLCSYKAKRNFELKQHIL  220 (373)
Q Consensus       202 C~~C~~~f~~~~~l~~H~~  220 (373)
                      |..|...|.....|.+|+.
T Consensus       185 C~~C~~~fld~~el~rH~~  203 (669)
T KOG2231|consen  185 CKFCHERFLDDDELYRHLR  203 (669)
T ss_pred             chhhhhhhccHHHHHHhhc
Confidence            4455555555555555543

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.16  E-value=0.069  Score=29.23  Aligned_cols=10  Identities=20%  Similarity=0.893  Sum_probs=4.5

Q ss_pred             eecCCCCccc
Q psy10075        262 FTCEHCDSKF  271 (373)
Q Consensus       262 ~~C~~C~~~f  271 (373)
                      |+|.+||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            3444444443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2785|consensus

Probab=93.14  E-value=0.1  Score=45.57  Aligned_cols=142  Identities=18%  Similarity=0.273  Sum_probs=89.8

Q ss_pred             ccccCCCchhccCcHHHHHHHHH-hcCCC---------------------------------CccceecCCCcccccChH
Q psy10075        199 PFKCTLCSYKAKRNFELKQHILR-IHQDN---------------------------------IEAEYHCTYCDYICSSRT  244 (373)
Q Consensus       199 ~~~C~~C~~~f~~~~~l~~H~~~-~h~~~---------------------------------~~~~~~C~~C~~~f~~~~  244 (373)
                      -|.|.-|...|.+....+.|+.+ .|.-+                                 ...++.|..|++.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            47899999999998888888743 33111                                 122478999999999888


Q ss_pred             HHhhhhhccC-CCCCC-------------CCee-------------cCCCCccccChhHHHHhhhhh------------c
Q psy10075        245 ILKSHINKKH-ANDED-------------KPFT-------------CEHCDSKFCKKYDMKMHMSRA------------H  285 (373)
Q Consensus       245 ~l~~H~~~~~-~~~~~-------------~~~~-------------C~~C~~~f~~~~~L~~H~~~~------------H  285 (373)
                      +...|+.... .....             ..+.             +..+...+........+. ..            -
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~-~dd~~Edi~~d~~~e  161 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEE-EDDEEEDIEEDGDDE  161 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhc-cCcchhhhhhccchh
Confidence            8888875321 10000             1111             222222222211122221 00            0


Q ss_pred             cCCCCccCCCCcccccchhhhhhhhhhccCC-----------------------CcccCCCCC---CCccChhHHHHHHH
Q psy10075        286 YGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN-----------------------QKYFCGSCN---FSCTSNTDLLEHVQ  339 (373)
Q Consensus       286 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~  339 (373)
                      ....|-.|-.|+..+.+...-..||..+|+-                       .-+.|-.|+   +.|.+....+.||.
T Consensus       162 ~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  162 DELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             cccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            0112467899999999999999999888872                       137888998   99999999999987


Q ss_pred             hh
Q psy10075        340 TN  341 (373)
Q Consensus       340 ~~  341 (373)
                      ..
T Consensus       242 ~K  243 (390)
T KOG2785|consen  242 DK  243 (390)
T ss_pred             hc
Confidence            43

>KOG4173|consensus

Probab=92.78  E-value=0.039  Score=43.58  Aligned_cols=81  Identities=23%  Similarity=0.487  Sum_probs=45.7

Q ss_pred             cceecCC--CcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhc---------cCCCCccCCC--
Q psy10075        229 AEYHCTY--CDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAH---------YGLKPFKCSF--  295 (373)
Q Consensus       229 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H---------~~~~~~~C~~--  295 (373)
                      ..+.|+.  |...|.+......|.+.-|.+      .|..|.+.|.+...|..|+...|         .|...|+|-.  
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEg  151 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEG  151 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHh
Confidence            3455554  555666666666665444433      46666666666666666664444         2344566654  


Q ss_pred             CcccccchhhhhhhhhhccC
Q psy10075        296 CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       296 C~~~f~~~~~l~~H~~~~h~  315 (373)
                      |+..|.+..+-..|+...|.
T Consensus       152 Ct~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  152 CTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhhhhHHHHhcc
Confidence            66666666666666654443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.47  E-value=0.11  Score=28.78  Aligned_cols=23  Identities=22%  Similarity=0.645  Sum_probs=18.2

Q ss_pred             cccCCCCCCCccChhHHHHHHHh
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQT  340 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~  340 (373)
                      +|.|.+|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46788888888888888888664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=91.60  E-value=0.046  Score=44.21  Aligned_cols=45  Identities=27%  Similarity=0.571  Sum_probs=20.8

Q ss_pred             cCccccccCCchHHHHHHhhhcCCCCCcccCCCCccccChHHHHHhhhcc
Q psy10075         85 CSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRK  134 (373)
Q Consensus        85 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~  134 (373)
                      |..|+..|.+..-|++|.+..     -|+|..|.+.+.+---|..|..++
T Consensus        13 cwycnrefddekiliqhqkak-----hfkchichkkl~sgpglsihcmqv   57 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK-----HFKCHICHKKLFSGPGLSIHCMQV   57 (341)
T ss_pred             eeecccccchhhhhhhhhhhc-----cceeeeehhhhccCCCceeehhhh
Confidence            555555555555555553222     255555555444443444443333

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=90.87  E-value=0.34  Score=30.00  Aligned_cols=11  Identities=18%  Similarity=0.833  Sum_probs=5.7

Q ss_pred             cceecCCCccc
Q psy10075        229 AEYHCTYCDYI  239 (373)
Q Consensus       229 ~~~~C~~C~~~  239 (373)
                      ..|.|+.||..
T Consensus        26 v~F~CPnCGe~   36 (61)
T COG2888          26 VKFPCPNCGEV   36 (61)
T ss_pred             eEeeCCCCCce
Confidence            34555555543

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=90.46  E-value=0.43  Score=29.68  Aligned_cols=11  Identities=18%  Similarity=0.809  Sum_probs=6.2

Q ss_pred             cceecCCCccc
Q psy10075        229 AEYHCTYCDYI  239 (373)
Q Consensus       229 ~~~~C~~C~~~  239 (373)
                      ..|.|+.||..
T Consensus        24 ~~F~CPnCG~~   34 (59)
T PRK14890         24 VKFLCPNCGEV   34 (59)
T ss_pred             CEeeCCCCCCe
Confidence            44666666654

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=90.28  E-value=0.35  Score=35.19  Aligned_cols=56  Identities=21%  Similarity=0.527  Sum_probs=45.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCC-----------------------------------------CccC----
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK-----------------------------------------PFKC----  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~-----------------------------------------~~~C----  293 (373)
                      .+..+|..|+..... +++..|++..|....                                         -|.|    
T Consensus         9 ~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~   87 (109)
T PF12013_consen    9 YRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDP   87 (109)
T ss_pred             CCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCC
Confidence            566899999998866 889999974542110                                         1899    


Q ss_pred             CCCcccccchhhhhhhhhhccC
Q psy10075        294 SFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       294 ~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      ..|++.+.+...|..|++.+|+
T Consensus        88 ~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   88 PHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCcEeccHHHHHHHHHHhcC
Confidence            9999999999999999988875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.88  E-value=0.24  Score=45.99  Aligned_cols=60  Identities=23%  Similarity=0.333  Sum_probs=33.0

Q ss_pred             ceecCCCCccccChhhHhhccc--cCCCC--CccccC--cCcccccchHHHHHHhhhhhccCCcccc
Q psy10075         25 NFICILCNYHAENFENIYLHLP--SHFEQ--KLFSCD--LCEYQTNTKIYIRRHMLKIHLRQRNLEC   85 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C   85 (373)
                      ++.|..|...|.....|.+|..  .|.++  +++.|+  .|++.|.....+..| ...|....++.+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRH-ILLHTSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCC-cccccCCCcccc
Confidence            4555566666666666666655  45555  555555  455555555555555 344444443333

>KOG2893|consensus

Probab=88.86  E-value=0.14  Score=41.48  Aligned_cols=42  Identities=31%  Similarity=0.575  Sum_probs=19.0

Q ss_pred             cCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhh
Q psy10075        264 CEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       264 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  310 (373)
                      |=.|++.|.....|..|++..|     |+|-+|.+..-+-..|..|-
T Consensus        13 cwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeeh
Confidence            4444444444444444443333     44555544444444444443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.78  E-value=0.15  Score=30.90  Aligned_cols=24  Identities=25%  Similarity=0.584  Sum_probs=10.3

Q ss_pred             ccCCCCCCCccChhHHHHHHHhhc
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      ++|+.|+..|....+...|+...|
T Consensus        18 lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          18 LRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eeCCchhHHHHHhHHHHHHhhHHh
Confidence            444444444444444444444433

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.30  E-value=0.3  Score=29.63  Aligned_cols=30  Identities=20%  Similarity=0.475  Sum_probs=21.0

Q ss_pred             CCCCccccCCCchhccCcHHHHHHHHHhcC
Q psy10075        195 TNEKPFKCTLCSYKAKRNFELKQHILRIHQ  224 (373)
Q Consensus       195 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  224 (373)
                      .++..+.||-|+..|....+..+|....|.
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            456667777777777777777777766553

>TIGR00622 ssl1 transcription factor ssl1

Probab=87.61  E-value=1.8  Score=31.27  Aligned_cols=47  Identities=15%  Similarity=0.318  Sum_probs=24.6

Q ss_pred             CCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        293 CSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       293 C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |--|...|........  .......+|+|+.|...|-..=++..|...|
T Consensus        58 C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        58 CFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ccCcCCCCCCcccccc--cccccccceeCCCCCCccccccchhhhhhcc
Confidence            6666666654321110  0011223477777777777666666665554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.28  E-value=0.2  Score=41.39  Aligned_cols=22  Identities=27%  Similarity=0.433  Sum_probs=12.2

Q ss_pred             CCeecCCCCccccChhHHHHhh
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      +.+.||+|+..|..........
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCc
Confidence            3456666666666654443333

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.17  E-value=0.47  Score=26.12  Aligned_cols=9  Identities=22%  Similarity=0.748  Sum_probs=3.9

Q ss_pred             eecCCCCcc
Q psy10075        262 FTCEHCDSK  270 (373)
Q Consensus       262 ~~C~~C~~~  270 (373)
                      |+|.+||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            344444433

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=85.25  E-value=0.76  Score=28.53  Aligned_cols=14  Identities=21%  Similarity=0.389  Sum_probs=7.4

Q ss_pred             CccccCCCchhccC
Q psy10075        198 KPFKCTLCSYKAKR  211 (373)
Q Consensus       198 ~~~~C~~C~~~f~~  211 (373)
                      ..|.||.||.....
T Consensus        26 v~F~CPnCGe~~I~   39 (61)
T COG2888          26 VKFPCPNCGEVEIY   39 (61)
T ss_pred             eEeeCCCCCceeee
Confidence            34566666644433

>PHA00626 hypothetical protein

Probab=85.25  E-value=0.41  Score=29.17  Aligned_cols=12  Identities=17%  Similarity=0.539  Sum_probs=5.7

Q ss_pred             CeecCCCCcccc
Q psy10075        261 PFTCEHCDSKFC  272 (373)
Q Consensus       261 ~~~C~~C~~~f~  272 (373)
                      .|.|+.||..|+
T Consensus        23 rYkCkdCGY~ft   34 (59)
T PHA00626         23 DYVCCDCGYNDS   34 (59)
T ss_pred             ceEcCCCCCeec
Confidence            344555554443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=84.26  E-value=0.54  Score=43.64  Aligned_cols=150  Identities=21%  Similarity=0.328  Sum_probs=81.5

Q ss_pred             CceecccccccccchhHHHhhhhh-ccCCC--CccccC--CCchhccCcHHHHHHHHHhcCCCCccceec--CCCccccc
Q psy10075        169 TRFQCSFCDRRFYFKNECTKHYLE-HHTNE--KPFKCT--LCSYKAKRNFELKQHILRIHQDNIEAEYHC--TYCDYICS  241 (373)
Q Consensus       169 ~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C--~~C~~~f~  241 (373)
                      .++.|..|...|.....+..|... .|.++  .++.|+  .|++.|.+...+..|. ..|..  ..++.+  ..+...+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~  364 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI-LLHTS--ISPAKEKLLNSSSKFS  364 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCc-ccccC--CCccccccccCccccc
Confidence            356777777777777777777532 56666  777777  6777777777777775 45544  222222  22333333


Q ss_pred             ChHHHhhhhh--ccCCCCCCCCeecC--CCCccccChhHHHHhhhhhccCCC--CccCCCCcccccchhhhhhhhhhccC
Q psy10075        242 SRTILKSHIN--KKHANDEDKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLK--PFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       242 ~~~~l~~H~~--~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~--~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      ....-..+..  ..........+.+.  .|...+.....+..|. ..|....  .+.+..|...+.....+..|.+.+..
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (467)
T COG5048         365 PLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHI-ITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTN  443 (467)
T ss_pred             cccCCCCccchhhccCccCCccccccccchhhhhcccccccccc-ccccccCCcCCCCCcchhhccCccccccccccccc
Confidence            2221100000  00011122333332  2555666666666666 5555444  45666777777777777777755555


Q ss_pred             CCcccCC
Q psy10075        316 NQKYFCG  322 (373)
Q Consensus       316 ~~~~~C~  322 (373)
                      ..++.|.
T Consensus       444 ~~~~~~~  450 (467)
T COG5048         444 HAPLLCS  450 (467)
T ss_pred             CCceeec
Confidence            5544443

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=83.78  E-value=0.93  Score=26.65  Aligned_cols=10  Identities=20%  Similarity=0.836  Sum_probs=4.3

Q ss_pred             eecCCCCccc
Q psy10075        262 FTCEHCDSKF  271 (373)
Q Consensus       262 ~~C~~C~~~f  271 (373)
                      |+|..||..|
T Consensus         3 Y~C~~Cg~~~   12 (44)
T smart00659        3 YICGECGREN   12 (44)
T ss_pred             EECCCCCCEe
Confidence            4444444443

present in RNA polymerase I, II and III

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.77  E-value=0.44  Score=39.40  Aligned_cols=23  Identities=9%  Similarity=0.151  Sum_probs=17.0

Q ss_pred             CcceecCCCCccccChhhHhhcc
Q psy10075         23 SYNFICILCNYHAENFENIYLHL   45 (373)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~   45 (373)
                      ++.+.||+|+..|.+........
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCc
Confidence            56789999999998876554433

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=83.24  E-value=0.81  Score=25.74  Aligned_cols=11  Identities=18%  Similarity=0.763  Sum_probs=5.7

Q ss_pred             Ccccccccccc
Q psy10075        141 PHKCTICESTY  151 (373)
Q Consensus       141 ~~~C~~C~~~f  151 (373)
                      ..+|+.|+..|
T Consensus        25 ~vrC~~C~~~f   35 (37)
T PF13719_consen   25 KVRCPKCGHVF   35 (37)
T ss_pred             EEECCCCCcEe
Confidence            45555555544

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=83.14  E-value=0.38  Score=37.17  Aligned_cols=16  Identities=19%  Similarity=0.260  Sum_probs=10.7

Q ss_pred             ccCCCCCCCccChhHH
Q psy10075        319 YFCGSCNFSCTSNTDL  334 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l  334 (373)
                      |+|+.||+.|.+...+
T Consensus        29 ~~c~~c~~~f~~~e~~   44 (154)
T PRK00464         29 RECLACGKRFTTFERV   44 (154)
T ss_pred             eeccccCCcceEeEec
Confidence            6777777777765543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.81  E-value=0.71  Score=33.27  Aligned_cols=15  Identities=27%  Similarity=0.877  Sum_probs=7.3

Q ss_pred             CCeecCCCCccccCh
Q psy10075        260 KPFTCEHCDSKFCKK  274 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~  274 (373)
                      .|.+|+.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            344555555555433

The function of members of this family is unknown.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=82.76  E-value=0.79  Score=25.61  Aligned_cols=11  Identities=18%  Similarity=0.806  Sum_probs=5.7

Q ss_pred             Ccccccccccc
Q psy10075        141 PHKCTICESTY  151 (373)
Q Consensus       141 ~~~C~~C~~~f  151 (373)
                      ..+|+.|+.+|
T Consensus        25 ~v~C~~C~~~f   35 (36)
T PF13717_consen   25 KVRCSKCGHVF   35 (36)
T ss_pred             EEECCCCCCEe
Confidence            45555555544

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=81.91  E-value=1.1  Score=26.56  Aligned_cols=10  Identities=20%  Similarity=0.999  Sum_probs=5.3

Q ss_pred             eecCCCCccc
Q psy10075        262 FTCEHCDSKF  271 (373)
Q Consensus       262 ~~C~~C~~~f  271 (373)
                      |+|+.||..|
T Consensus         4 y~C~~CG~~~   13 (46)
T PRK00398          4 YKCARCGREV   13 (46)
T ss_pred             EECCCCCCEE
Confidence            5555555544

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=81.80  E-value=0.87  Score=25.70  Aligned_cols=10  Identities=20%  Similarity=0.786  Sum_probs=4.9

Q ss_pred             cccccccccc
Q psy10075        142 HKCTICESTY  151 (373)
Q Consensus       142 ~~C~~C~~~f  151 (373)
                      ..|+.|+..|
T Consensus        26 v~C~~C~~~~   35 (38)
T TIGR02098        26 VRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEE
Confidence            4455555444

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR00622 ssl1 transcription factor ssl1

Probab=80.56  E-value=2.8  Score=30.28  Aligned_cols=19  Identities=32%  Similarity=0.691  Sum_probs=10.2

Q ss_pred             CcccccccccccCHHHHHH
Q psy10075        141 PHKCTICESTYLTKVELKN  159 (373)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~  159 (373)
                      |..|+.|+....+...|.+
T Consensus        15 P~~CpiCgLtLVss~HLAR   33 (112)
T TIGR00622        15 PVECPICGLTLILSTHLAR   33 (112)
T ss_pred             CCcCCcCCCEEeccchHHH
Confidence            4556666555555544443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=80.43  E-value=1.2  Score=34.72  Aligned_cols=24  Identities=29%  Similarity=0.704  Sum_probs=14.9

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcc
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY  298 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~  298 (373)
                      .|+|++||..              +.++.|-+||+||.
T Consensus       134 ~~vC~vCGy~--------------~~ge~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT--------------HEGEAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc--------------ccCCCCCcCCCCCC
Confidence            5777777643              33456677777763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	373
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-12
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		6e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		7e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-07
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		6e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		4e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-04
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		3e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 12/185 (6%)
Query: 73  MLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSL 132
              +   ++   C  C  +FS +  L +H QR HT ++P+ C  C      K D+T H  
Sbjct: 12  QAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQ- 69
Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLE 192
           R H+ G+KP+KC  C  ++  +  L+ H  + H G+  + C  C + F        H   
Sbjct: 70  RTHT-GEKPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRT 127
Query: 193 HHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTIL----KS 248
            HT EKP+KC  C     R   L  H  R H    E  Y C  C    S R  L    ++
Sbjct: 128 -HTGEKPYKCPECGKSFSREDNLHTH-QRTH--TGEKPYKCPECGKSFSRRDALNVHQRT 183
Query: 249 HINKK 253
           H  KK
Sbjct: 184 HTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 164 IHQGQTRFQCSFCDRRFYFKNECTKHYLEH---HTNEKPFKCTLCSYKAKRNFELKQHIL 220
           +  G+  + C  C + F   +    H  EH   HT EKP+KC  C     ++F  K+ + 
Sbjct: 15  LEPGEKPYACPECGKSFSRSD----HLAEHQRTHTGEKPYKCPECG----KSFSDKKDLT 66
Query: 221 RIHQDNI-EAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKM 279
           R  + +  E  Y C  C    S R  L++H   +  +  +KP+ C  C   F +   ++ 
Sbjct: 67  RHQRTHTGEKPYKCPECGKSFSQRANLRAH---QRTHTGEKPYACPECGKSFSQLAHLRA 123
Query: 280 HMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK-YFCGSCNFSCTSNTDLLEHV 338
           H  R H G KP+KC  C    + +  L +H  R H+ +K Y C  C  S +    L  H 
Sbjct: 124 HQ-RTHTGEKPYKCPECGKSFSREDNLHTHQ-RTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 339 QT 340
           +T
Sbjct: 182 RT 183

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +    EL  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 59
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 60  EKPFACDICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +    +L  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 59
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 60  EKPFACDICGRKFARSDERKRH 81

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 82  NLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRK-HSKGDK 140
            +EC  C   F     LK H  RKHT ++PF C  C      K ++  H  R   ++ ++
Sbjct: 7   GVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 141 PHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
              C++C+ T+  ++EL+ H++  H G+  ++CS C ++F  K +   H ++ H+ 
Sbjct: 66  VFTCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 114 CNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILK--IHQGQTRF 171
           C  C  K  +KY +  H+ RKH+ G+KP +C  C   Y  K  L  H  +  +++ +  F
Sbjct: 10  CPTCHKKFLSKYYLKVHN-RKHT-GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 172 QCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQD 225
            CS C   F  + E   H + H T E P+KC+ CS +  +  +L+ H++++H  
Sbjct: 68  TCSVCQETFRRRMELRLHMVSH-TGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 167 GQTRFQCSFCDRRFYFKNECTKHYLE----HHTNEKPFKCTLCSYKAKRNFELKQHILRI 222
           G +  +C  C ++F      +K+YL+     HT EKPF+C  C     R   L +H  R 
Sbjct: 4   GSSGVECPTCHKKFL-----SKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN 58
Query: 223 HQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMS 282
             +  E  + C+ C      R  L+ H+    ++  + P+ C  C  +F +K D++ HM 
Sbjct: 59  CMNRSEQVFTCSVCQETFRRRMELRLHMV---SHTGEMPYKCSSCSQQFMQKKDLQSHMI 115
Query: 283 RAHYG 287
           + H G
Sbjct: 116 KLHSG 120

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +    EL  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 59
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 60  EKPFACDICGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +    EL  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 58
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 59  EKPFACDICGRKFARSDERKRH 80

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +    EL  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 59
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 60  EKPFACDICGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +     L  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 59
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 60  EKPFACDICGRKFARSDERKRH 81

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 136 SKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHT 195
           S    PHKC +C   +  K +LK H ++ H G   ++C  CD      +   KH L  H+
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHS 60
Query: 196 NEKPFKCTLCSYKAKRNFELKQHILRIHQDN 226
           +E+PFKC +C Y ++ + +L  H LR H  +
Sbjct: 61  DERPFKCQICPYASRNSSQLTVH-LRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 255 ANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH 314
           ++    P  CE C   F +K  +K HM R H G+KP+KC  C+Y       L  H+ RIH
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHL-RIH 59
Query: 315 SNQKYF-CGSCNFSCTSNTDLLEHVQTNHIIVGESSS 350
           S+++ F C  C ++  +++ L  H++++    G SS 
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSSG 96

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +     L  HI +IH GQ  FQC  C R F   +  T H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTG 59
Query: 197 EKPFKCTLCSYKAKRNFELKQH 218
           EKPF C +C  K  R+ E K+H
Sbjct: 60  EKPFACDICGRKFARSDERKRH 81

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
           H+ EKP++C +C  +  ++  +K HIL+ H +N+ A++HC +CD + + ++ L  H+ K+
Sbjct: 10  HSGEKPYECYICHARFTQSGTMKMHILQKHTENV-AKFHCPHCDTVIARKSDLGVHLRKQ 68
Query: 254 HA 255
           H+
Sbjct: 69  HS 70

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 88  CDSTFSDNMDLKKHIQRKHTND--RPFSCNFCD-----YKSKTKYDITSHSLRKHSKGDK 140
           C   F     L  HI  +H +   + F C++          K +Y +  H +R+H+ G+K
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-MRRHT-GEK 66
Query: 141 PHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCS--FCDRRFYFKNECTKHYLEHHTN 196
           PHKCT   C  +Y     LK H L+ H G+  + C    C + F   ++  KH    H+N
Sbjct: 67  PHKCTFEGCRKSYSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Query: 197 EKPFKCTL--CSYKAKRNFELKQHILRIH 223
           EKP+ C L  C+ +      L++H+  +H
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +  K  L  HI +IH GQ  FQC  C R F  +     H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQQASLNAH-IRTHTG 59
Query: 197 EKPFKCTLCSYK 208
           EKPF C +C  K
Sbjct: 60  EKPFACDICGRK 71

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 259 DKPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
           ++P+ C  E CD +F +K ++  H+ R H G KPF+C  C    + +  L +H+ R H+ 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQQASLNAHI-RTHTG 59
Query: 317 QKYF 320
           +K F
Sbjct: 60  EKPF 63

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTN 196
           ++P+ C +  C+  +  K  L  HI +IH GQ  FQC  C R F       +H +  HT 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQHTGLNQH-IRTHTG 59
Query: 197 EKPFKCTLCSYK 208
           EKPF C +C  K
Sbjct: 60  EKPFACDICGRK 71

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 259 DKPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
           ++P+ C  E CD +F +K ++  H+ R H G KPF+C  C    +   GL  H+ R H+ 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQHTGLNQHI-RTHTG 59
Query: 317 QKYF 320
           +K F
Sbjct: 60  EKPF 63

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 107 TNDRPFSCNF--CDYKSKTKYDITSHSLRKHSKGDKPHKCTI--CESTYLTKVELKNHIL 162
           +  RPF C +  C+ +      +  HS RKH+ G+KP++C    CE  +    +LK H  
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHT-GEKPYQCDFKDCERRFSRSDQLKRHQR 59
Query: 163 KIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL--CSYKAKRNFELKQH 218
           + H G   FQC  C R+F  +++  K +   HT EKPF C    C  K  R+ EL +H
Sbjct: 60  R-HTGVKPFQCKTCQRKFS-RSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 236 CDYI-CSSRTILKSHI---NKKHANDEDKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLK 289
           C Y  C+ R    SH+   ++KH  +  KP+ C+   C+ +F +   +K H  R H G+K
Sbjct: 9   CAYPGCNKRYFKLSHLQMHSRKHTGE--KPYQCDFKDCERRFSRSDQLKRHQRR-HTGVK 65
Query: 290 PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYF---CGSCNFSCTSNTDLLEH 337
           PF+C  C+ K +    LK+H TR H+ +K F     SC      + +L+ H
Sbjct: 66  PFQCKTCQRKFSRSDHLKTH-TRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 139 DKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEK 198
           +KP+KC  C  ++     L+ H  + H G+  ++C  C + F   ++  KH    HT EK
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKH-QRTHTGEKPYKCPECGKSFSQSSDLQKHQRT-HTGEK 59
Query: 199 PFKCTLCSYKAKRNFELKQHILRIHQD 225
           P+KC  C     R+  L +H  R HQ+
Sbjct: 60  PYKCPECGKSFSRSDHLSRH-QRTHQN 85

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 59  CEYQTNTKIYIRRHMLKIHL---RQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCN 115
           C ++  TK++     ++ HL     R   C+ C   F ++  LK+H Q  HT ++PF C 
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRH-QLVHTGEKPFQCT 66
Query: 116 F--CDYKSKTKYDITSHSLRKHSKGDKPHKCTI--CESTYLTKVELKNHIL 162
           F  C  +    +++ +H +R H+ GD+P+ C    C   +     LK+HIL
Sbjct: 67  FEGCGKRFSLDFNLRTH-VRIHT-GDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELK-----QHILRIHQD 225
           FQC  C R F   +  T H +  HT EKPF C +C  K  R+ E K     QHIL I +D
Sbjct: 4   FQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILED 62
Query: 226 NIE 228
            +E
Sbjct: 63  KVE 65

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 82  NLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKG-DK 140
            + C +C   F D   L +H +  H+ ++P+SC  C  + K K D  S+ +R H     K
Sbjct: 7   GVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRK-DRMSYHVRSHDGSVGK 64
Query: 141 PHKCTICESTYLTKVELKNHILKIHQGQT 169
           P+ C  C   +     L  HI ++H G +
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 167 GQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDN 226
           G +   C  C + F       +H L H + EKP+ C +C  + KR   +  H+ R H  +
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSH-SGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGS 61
Query: 227 IEAEYHCTYCDYICSSRTILKSHINKKHAN 256
           +   Y C  C    S    L  HI + H+ 
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
           DKP+ C+ C + F  K ++  H +  H G KP++C+ C  +      LK+H TRIHS +K
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGEK 72

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 59  CEYQTNTKIYIRRHMLKIHLR----QRNLECSL--CDSTFSDNMDLKKHIQRKHTNDRPF 112
           C+Y   TK+Y +   LK HLR    ++  +C+   CD  F+ + +L +H  RKHT  +PF
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPF 76
Query: 113 SCNFCD 118
            C  C+
Sbjct: 77  QCGVCN 82

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 144 CTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCT 203
           C +C+ +Y+    L+ H   IH  + ++ C +C++ F      TKH + HHT E+ ++C 
Sbjct: 25  CIVCKRSYVCLTSLRRH-FNIHSWEKKYPCRYCEKVFPLAEYRTKHEI-HHTGERRYQCL 82
Query: 204 LCSYKAKRNFE-LKQHILRIHQDNIEAE 230
            C  K+  N++ +  HI  +H  +   +
Sbjct: 83  ACG-KSFINYQFMSSHIKSVHSQDPSGD 109

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 82  NLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKP 141
           + +C +C  +F  +  L  H+   H++ RP+ C +C  +   K D+  H+      G+KP
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLI-HSDTRPYPCQYCGKRFHQKSDMKKHTFIH--TGEKP 57
Query: 142 HKCTICESTYLTKVELKNHILK 163
           HKC +C   +     L  H  K
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRK 79

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 144 CTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCT 203
           C IC  ++     L  H+L IH     + C +C +RF+ K++  KH    HT EKP KC 
Sbjct: 4   CKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGEKPHKCQ 61
Query: 204 LCSYKAKRNFELKQH 218
           +C     ++  L  H
Sbjct: 62  VCGKAFSQSSNLITH 76

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 264 CEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH 314
           C +C   F   Y + +H+ R H G KP+KC FCEY    K  L+ H+ R H
Sbjct: 7   CSYCGKFFRSNYYLNIHL-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNI 227
           F C  C R F  +    +HY   HTNEKP+ C LC+    R   L +H  +IH  N+
Sbjct: 3   FVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 88  CDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKS--------KTKYDITSHSLRKHSKGD 139
           CD TFS   +L  H+  +H      + + C ++         K KY + +H +R H+ G+
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH-IRVHT-GE 88
Query: 140 KPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYLEHHT 195
           KP  C    C   +     LK H  + H G+  F+C F  CDRRF   ++  KH +  HT
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIH-KRTHTGEKPFKCEFEGCDRRFANSSDRKKH-MHVHT 146
Query: 196 NEK 198
           ++K
Sbjct: 147 SDK 149

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	373
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	5e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	9e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	6e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	6e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	8e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-04
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	4e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.0 bits (167), Expect = 5e-14
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 13/151 (8%)

Query: 84  ECSLCDSTFSDNMDLKKHI--QRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---G 138
               C   F     L  HI  +  H   + F C++     + +     + L  H +   G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 139 DKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYLEHH 194
           +KPHKCT   C  +Y     LK H+ + H G+  + C    C + F   ++  KH    H
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 195 TNEKPFKCTL--CSYKAKRNFELKQHILRIH 223
           +NEKP+ C L  C+ +      L++H+ +  
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHV-KTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 43/190 (22%), Positives = 63/190 (33%), Gaps = 51/190 (26%)

Query: 140 KPHKCTICESTYLTKVELKNHILK--IHQGQTRFQCSFCDRRFYFKNECTKHYLEH---- 193
              +   C   + ++ +L +HI    IH  +  F C +       +    ++ L      
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 194 HTNEKPFKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHIN 251
           HT EKP KCT   C     R   LK H+ R H                            
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTG-------------------------- 94

Query: 252 KKHANDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKF----G 305
                  +KP+ CEH  C   F    D   H +R H   KP+ C      CT ++     
Sbjct: 95  -------EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPG--CTKRYTDPSS 145

Query: 306 LKSHVTRIHS 315
           L+ HV +   
Sbjct: 146 LRKHV-KTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 20/158 (12%)

Query: 197 EKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRT-----ILKSHIN 251
           E   +   CS +     +L  HI   H      E+ C +       R      +L  H+ 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM- 59

Query: 252 KKHANDEDKPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG---- 305
           ++H  +  KP  C  E C   + +  ++K H+ R+H G KP+ C      C+  F     
Sbjct: 60  RRHTGE--KPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCE--HEGCSKAFSNASD 114

Query: 306 LKSHVTRIHSNQK-YFCGS--CNFSCTSNTDLLEHVQT 340
              H  R HSN+K Y C    C    T  + L +HV+T
Sbjct: 115 RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 231 YHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKK-----YDMKMHMSRAH 285
                C     S+  L  HIN +H + E K F C         +     Y + +HM R H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRH 62

Query: 286 YGLKPFKCSFCEYKCTTKF----GLKSHVTRIHSNQK-YFC--GSCNFSCTSNTDLLEHV 338
            G KP KC+F    C   +     LK+H+ R H+ +K Y C    C+ + ++ +D  +H 
Sbjct: 63  TGEKPHKCTFEG--CRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQ 119

Query: 339 QTNH 342
              H
Sbjct: 120 NRTH 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 63.7 bits (156), Expect = 7e-13
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 4/125 (3%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
            +     +C  C  K    + LK H  R H    E  + C  C      +  L  H  + 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTG--EKPFECPKCGKCYFRKENLLEHEARN 58

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRI 313
             N  ++ FTC  C   F ++ ++++HM  +H G  P+KCS C  +   K  L+SH+ ++
Sbjct: 59  CMNRSEQVFTCSVCQETFRRRMELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL 117

Query: 314 HSNQK 318
           HS   
Sbjct: 118 HSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 58.7 bits (143), Expect = 5e-11
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%)

Query: 106 HTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNH--ILK 163
            +      C  C  K  +KY +  H  RKH+ G+KP +C  C   Y  K  L  H     
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVH-NRKHT-GEKPFECPKCGKCYFRKENLLEHEARNC 59

Query: 164 IHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
           +++ +  F CS C   F  + E   H +  HT E P+KC+ CS +  +  +L+ H++++H
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK------ 137
           EC  C   F     LK H  RKHT ++PF C  C      K      +L +H        
Sbjct: 9   ECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCG-----KCYFRKENLLEHEARNCMNR 62

Query: 138 GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNE 197
            ++   C++C+ T+  ++EL+ H +  H G+  ++CS C ++F  K +   H ++ H+  
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

Query: 198 K 198
            
Sbjct: 122 S 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 52.9 bits (128), Expect = 5e-09
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 37/154 (24%)

Query: 138 GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKH--YLEHHT 195
           G    +C  C   +L+K  LK H  + H G+  F+C  C + ++ K    +H      + 
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 196 NEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHA 255
           +E+ F C++C    +R  EL+ H +  H                                
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLH-MVSHTG------------------------------ 91

Query: 256 NDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
              + P+ C  C  +F +K D++ HM + H G  
Sbjct: 92  ---EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.7 bits (112), Expect = 7e-07
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 13/122 (10%)

Query: 52  KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRK---HTN 108
               C  C  +  +K Y++ H  + H  ++  EC  C   +    +L +H + +   + +
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEH-EARNCMNRS 63

Query: 109 DRPFSCNFCDYKSKTKYDITSHSLRKHSK---GDKPHKCTICESTYLTKVELKNHILKIH 165
           ++ F+C+ C      +       LR H     G+ P+KC+ C   ++ K +L++H++K+H
Sbjct: 64  EQVFTCSVCQ-----ETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

Query: 166 QG 167
            G
Sbjct: 119 SG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.0 bits (105), Expect = 6e-06
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSH--VTRIHSNQ 317
               C  C  KF  KY +K+H  R H G KPF+C  C      K  L  H     ++ ++
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 318 K-YFCGSCNFSCTSNTDLLEH 337
           + + C  C  +     +L  H
Sbjct: 65  QVFTCSVCQETFRRRMELRLH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 61.1 bits (149), Expect = 1e-11
 Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 18/141 (12%)

Query: 76  IHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKS---------KTKYD 126
           I   Q +     CD TFS   +L  H         P   N   Y           K KY 
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTH-VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77

Query: 127 ITSHSLRKHSKGDKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYF 182
           + +H +R H+ G+KP  C    C   +     LK H  + H G+  F+C F  CDRRF  
Sbjct: 78  LVNH-IRVHT-GEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKPFKCEFEGCDRRFAN 134

Query: 183 KNECTKHYLEHHTNEKPFKCT 203
            ++  KH +  HT++K    +
Sbjct: 135 SSDRKKH-MHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 20/141 (14%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIH-------QDNIEAEYHCTYCDYICSSRTIL 246
              +       C        EL  H+  +         +++     C        ++  L
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 247 KSHINKKHANDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKF 304
            +HI + H    +KPF C    C   F +  ++K+H  R H G KPFKC F    C  +F
Sbjct: 79  VNHI-RVHTG--EKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEG--CDRRF 132

Query: 305 GLKSHVT---RIHSNQK-YFC 321
              S       +H++ K    
Sbjct: 133 ANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 39/144 (27%), Positives = 52/144 (36%), Gaps = 21/144 (14%)

Query: 164 IHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKA---------KRNFE 214
           I + Q       CDR F   +E   H +       P +     Y           K  ++
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTH-VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77

Query: 215 LKQHILRIHQDNIEAEYHCTY--CDYICSSRTILKSHINKKHANDEDKPFTCEH--CDSK 270
           L  HI R+H    E  + C +  C  I +    LK H  + H  +  KPF CE   CD +
Sbjct: 78  LVNHI-RVHTG--EKPFPCPFPGCGKIFARSENLKIHK-RTHTGE--KPFKCEFEGCDRR 131

Query: 271 FCKKYDMKMHMSRAHYGLKPFKCS 294
           F    D K HM   H   K    S
Sbjct: 132 FANSSDRKKHM-HVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.4 bits (90), Expect = 9e-04
 Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 241 SSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY-- 298
           SS   +K  ++ K  ++       + CD  F   +++  H+    +   P + +   Y  
Sbjct: 5   SSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYWE 63

Query: 299 ---KCTTKFGLKSHVT---RIHSNQK-YFC--GSCN--FSCTSN 331
              +    F  K  +    R+H+ +K + C    C   F+ + N
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSEN 107

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 59.8 bits (146), Expect = 9e-11
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 129 SHSLRKHSK---GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNE 185
           S S    +    G+KP+ C  C  ++     L  H  + H G+  ++C  C + F  K +
Sbjct: 6   SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKD 64

Query: 186 CTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTI 245
            T+H    HT EKP+KC  C     +   L+ H  R H    E  Y C  C    S    
Sbjct: 65  LTRH-QRTHTGEKPYKCPECGKSFSQRANLRAH-QRTH--TGEKPYACPECGKSFSQLAH 120

Query: 246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFG 305
           L++H  + H    +KP+ C  C   F ++ ++  H  R H G KP+KC  C    + +  
Sbjct: 121 LRAH-QRTHT--GEKPYKCPECGKSFSREDNLHTHQ-RTHTGEKPYKCPECGKSFSRRDA 176

Query: 306 LKSHVTRIHSNQK 318
           L  H  R H+ +K
Sbjct: 177 LNVH-QRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 59.0 bits (144), Expect = 1e-10
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 12/143 (8%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---GDK 140
            C  C  +FS +  L +H QR HT ++P+ C  C  KS +        L +H +   G+K
Sbjct: 23  ACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECG-KSFSD----KKDLTRHQRTHTGEK 76

Query: 141 PHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPF 200
           P+KC  C  ++  +  L+ H  + H G+  + C  C + F        H    HT EKP+
Sbjct: 77  PYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPY 134

Query: 201 KCTLCSYKAKRNFELKQHILRIH 223
           KC  C     R   L  H  R H
Sbjct: 135 KCPECGKSFSREDNLHTH-QRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.8 bits (141), Expect = 3e-10
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 12/143 (8%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---GDK 140
           +C  C  +FSD  DL +H QR HT ++P+ C  C  KS ++      +LR H +   G+K
Sbjct: 51  KCPECGKSFSDKKDLTRH-QRTHTGEKPYKCPECG-KSFSQ----RANLRAHQRTHTGEK 104

Query: 141 PHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPF 200
           P+ C  C  ++     L+ H  + H G+  ++C  C + F  ++    H    HT EKP+
Sbjct: 105 PYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPY 162

Query: 201 KCTLCSYKAKRNFELKQHILRIH 223
           KC  C     R   L  H  R H
Sbjct: 163 KCPECGKSFSRRDALNVH-QRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 51.3 bits (124), Expect = 6e-08
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 9/145 (6%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
              EKP+ C  C     R+  L +H  R H    E  Y C  C    S +  L  H  + 
Sbjct: 16  EPGEKPYACPECGKSFSRSDHLAEH-QRTHTG--EKPYKCPECGKSFSDKKDLTRH-QRT 71

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRI 313
           H    +KP+ C  C   F ++ +++ H  R H G KP+ C  C    +    L++H  R 
Sbjct: 72  HTG--EKPYKCPECGKSFSQRANLRAHQ-RTHTGEKPYACPECGKSFSQLAHLRAH-QRT 127

Query: 314 HSNQK-YFCGSCNFSCTSNTDLLEH 337
           H+ +K Y C  C  S +   +L  H
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTH 152

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.1 bits (131), Expect = 7e-10
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYG--LKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ 317
           KP+ C  C ++F +   MKMH+    +   +  F C  C+     K  L  H+ + HS  
Sbjct: 14  KPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72

Query: 318 KYFCG 322
               G
Sbjct: 73  GPSSG 77

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 215 LKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKK 274
                 R H    E  Y C  C    +    +K HI  +   +    F C HCD+   +K
Sbjct: 3   SGSS-GRTHSG--EKPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARK 58

Query: 275 YDMKMHMSRAHYGLKPF 291
            D+ +H+ + H    P 
Sbjct: 59  SDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 98  LKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVEL 157
                 R H+ ++P+ C  C  +      +  H L+KH++      C  C++    K +L
Sbjct: 3   SGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 158 KNHILKIHQG 167
             H+ K H  
Sbjct: 62  GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 131 SLRKHSK---GDKPHKCTICESTYLTKVELKNHILKIHQGQTR--FQCSFCDRRFYFKNE 185
           S     +   G+KP++C IC + +     +K HI      +    F C  CD     K++
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSD 60

Query: 186 CTKHYLEHHTNEKPF 200
              H  + H+   P 
Sbjct: 61  LGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 157 LKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHT-NEKPFKCTLCSYKAKRNFEL 215
             +   + H G+  ++C  C  RF        H L+ HT N   F C  C     R  +L
Sbjct: 3   SGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 216 KQHILRIH 223
             H+ + H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 278 KMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH---SNQKYFCGSCNFSCTSNTDL 334
                R H G KP++C  C  + T    +K H+       +  K+ C  C+      +DL
Sbjct: 4   GSSG-RTHSGEKPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 335 LEHVQTNH 342
             H++  H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 54  FSCDLCEYQTNTKIYIRRHMLKIHLRQRNLE------CSLCDSTFSDNMDLKKHIQRKHT 107
           + C +C        + +   +K+H+ Q++ E      C  CD+  +   DL  H++++H+
Sbjct: 16  YECYICH-----ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70

Query: 108 NDRPFS 113
              P S
Sbjct: 71  YSGPSS 76

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 20/192 (10%)

Query: 163 KIHQGQTRFQCSF--CDRRFYFKNECTKHYLEHHTNEKPFKCT--LCSYKAKRNFELKQH 218
            +     R+ CSF  C   +    +   H L  HT EKPF C    C         L +H
Sbjct: 5   ALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRH 63

Query: 219 ILRIHQDNIEAEYHCT--YCDYICSSRTILKSHINKKHANDEDKPFTC--EHCDSKFCKK 274
               H    E  + C    CD   +++  +K H   +  N +   + C  E+C   F K 
Sbjct: 64  S-LTHTG--EKNFTCDSDGCDLRFTTKANMKKHF-NRFHNIKICVYVCHFENCGKAFKKH 119

Query: 275 YDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVT---RIHSNQK-YFCGSCNFSCTS 330
             +K+H   +H    P++C      C  +F L S +    ++H+        SC+F   +
Sbjct: 120 NQLKVHQ-FSHTQQLPYECP--HEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKT 176

Query: 331 NTDLLEHVQTNH 342
            T  L+HV   H
Sbjct: 177 WTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 47/193 (24%), Positives = 67/193 (34%), Gaps = 20/193 (10%)

Query: 133 RKHSKGDKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCS--FCDRRFYFKNECTK 188
                  K + C+   C + Y    +L+ H L  H G+  F C    C++ F   +  T+
Sbjct: 5   ALPV-VYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 189 HYLEHHTNEKPFKCT--LCSYKAKRNFELKQHILRIHQDNIEAEYHCTY--CDYICSSRT 244
           H L  HT EK F C    C  +      +K+H      +     Y C +  C        
Sbjct: 63  HSL-THTGEKNFTCDSDGCDLRFTTKANMKKHF-NRFHNIKICVYVCHFENCGKAFKKHN 120

Query: 245 ILKSHINKKHANDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTT 302
            LK H    H      P+ C H  CD +F     +K H  + H G    K   C      
Sbjct: 121 QLKVHQ-FSHTQQ--LPYECPHEGCDKRFSLPSRLKRHE-KVHAGYPCKKDDSCS-FVGK 175

Query: 303 KF-GLKSHVTRIH 314
            +     HV   H
Sbjct: 176 TWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 15/172 (8%)

Query: 66  KIYIRRHMLKIHLR----QRNLECS--LCDSTFSDNMDLKKHIQRKHTNDRPFSCN--FC 117
             Y +   L+ HL     ++   C    C+  F+    L +H    HT ++ F+C+   C
Sbjct: 22  AAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTGEKNFTCDSDGC 80

Query: 118 DYKSKTKYDITSHSLRKHSKGDKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCS- 174
           D +  TK ++  H  R H+     + C    C   +    +LK H    H  Q  ++C  
Sbjct: 81  DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPH 139

Query: 175 -FCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQD 225
             CD+RF   +   +H  + H      K   CS+  K      +H+   HQD
Sbjct: 140 EGCDKRFSLPSRLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.6 bits (124), Expect = 5e-09
 Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 4/72 (5%)

Query: 138 GDKPHKCTICESTYLTKVELKNHILKIH---QGQTRFQCSFCDRRFYFKNECTKHYLEHH 194
           G    +C IC  T   K  L  H  + H       RF C FC +RF   +    H  + H
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 195 TNEKPFKCTLCS 206
                       
Sbjct: 63  PALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 8e-09
 Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 4/68 (5%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAH---YGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
               CE C     +K  +  H  R H        F C FC  +      + +H ++ H  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 317 QKYFCGSC 324
                   
Sbjct: 65  LLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 16/66 (24%), Positives = 22/66 (33%)

Query: 231 YHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKP 290
             C  C + C  +  L  H  K         F CE C  +F K   +  H S++H  L  
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 291 FKCSFC 296
                 
Sbjct: 68  APQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 12/73 (16%), Positives = 19/73 (26%), Gaps = 3/73 (4%)

Query: 106 HTNDRPFSCNFCDYKSKTKYDITSHSLRKHS--KGDKPHKCTICESTYLTKVELKNHILK 163
            +      C  C +  + K  +  H  RKH+         C  C   +     +  H  K
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 164 IHQGQTRFQCSFC 176
            H           
Sbjct: 61  SHPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 5/62 (8%)

Query: 285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK----YFCGSCNFSCTSNTDLLEHVQT 340
             G    +C  C + C  K  L  H  R H+       + C  C         +  H   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 341 NH 342
           +H
Sbjct: 61  SH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 2/63 (3%)

Query: 165 HQGQTRFQCSFCDRRFYFKNECTKHYLEH--HTNEKPFKCTLCSYKAKRNFELKQHILRI 222
             G +  QC  C      K     H  +H        F C  C  + ++   +  H  + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 223 HQD 225
           H  
Sbjct: 62  HPA 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 10/69 (14%), Positives = 17/69 (24%), Gaps = 4/69 (5%)

Query: 52  KLFSCDLCEYQTNTKIYIRRHMLKIHLRQ---RNLECSLCDSTFSDNMDLKKHIQRKHTN 108
               C++C +    K  +  H  + H          C  C   F     +  H  + H  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 109 DRPFSCNFC 117
                    
Sbjct: 65  LLLAPQESS 73

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 136 SKGDKPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYL 191
            +  + H C    C   Y     LK H L+ H G+  ++C++  CD RF   +E T+HY 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDELTRHY- 67

Query: 192 EHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQD 225
             HT  KPF+C +C+    R+  L  H+ + HQ+
Sbjct: 68  RKHTGAKPFQCGVCNRSFSRSDHLALHM-KRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 59  CEYQTNTKIYIRRHMLKIHLR----QRNLECSL--CDSTFSDNMDLKKHIQRKHTNDRPF 112
           C+Y   TK+Y +   LK HLR    ++  +C+   CD  F+ + +L +H  RKHT  +PF
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH-YRKHTGAKPF 76

Query: 113 SCNFCDYKSKTKYDITSHSLRKHSK 137
            C  C+     +    S  L  H K
Sbjct: 77  QCGVCN-----RSFSRSDHLALHMK 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
             +  P KC +C     R  +LK H+ R H       Y C  CDY  +  + L  H+ + 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTG--VKPYKCKTCDYAAADSSSLNKHL-RI 58

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC 293
           H+  +++PF C+ C         + +H+ R+H G      
Sbjct: 59  HS--DERPFKCQICPYASRNSSQLTVHL-RSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.3 bits (106), Expect = 3e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 138 GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNE 197
              PHKC +C   +  K +LK H+ + H G   ++C  CD      +   KH L  H++E
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSDE 62

Query: 198 KPFKCTLCSYKAKRNFELKQHILRIH 223
           +PFKC +C Y ++ + +L  H LR H
Sbjct: 63  RPFKCQICPYASRNSSQLTVH-LRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 47  SHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKH 106
           S        C++C    + K  ++ HM + H   +  +C  CD   +D+  L KH  R H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKH-LRIH 59

Query: 107 TNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKC 144
           +++RPF C  C Y S+    +T H LR H+ GD     
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVH-LRSHT-GDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.4 bits (101), Expect = 1e-05
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK- 318
            P  CE C   F +K  +K HM R H G+KP+KC  C+Y       L  H+ RIHS+++ 
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERP 64

Query: 319 YFCGSCN--FSCTSN 331
           + C  C      +S 
Sbjct: 65  FKCQICPYASRNSSQ 79

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 16/127 (12%)

Query: 195 TNEKPFKCT--LCSYKAKRNFELKQHILRIHQDNIEAEYHCTY--CDYICSSRTILKSHI 250
           + ++PF C    C+ +  +   L+ H  R H    E  Y C +  C+   S    LK H 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTG--EKPYQCDFKDCERRFSRSDQLKRHQ 58

Query: 251 NKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHV 310
            ++H     KPF C+ C  KF +   +K H  R H G KPF C +    C  KF     +
Sbjct: 59  -RRHTGV--KPFQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPS--CQKKFARSDEL 112

Query: 311 T---RIH 314
                +H
Sbjct: 113 VRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 39/138 (28%), Positives = 54/138 (39%), Gaps = 34/138 (24%)

Query: 88  CDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTIC 147
           C+  +     L+ H  RKHT ++P+ C+F D                            C
Sbjct: 14  CNKRYFKLSHLQMH-SRKHTGEKPYQCDFKD----------------------------C 44

Query: 148 ESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL--C 205
           E  +    +LK H  + H G   FQC  C R+F   +    H    HT EKPF C    C
Sbjct: 45  ERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHLKTH-TRTHTGEKPFSCRWPSC 102

Query: 206 SYKAKRNFELKQHILRIH 223
             K  R+ EL +H   +H
Sbjct: 103 QKKFARSDELVRHH-NMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 138 GDKPHKCT--ICESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYLEH 193
             +P  C    C   Y     L+ H  + H G+  +QC F  C+RRF   ++  +H    
Sbjct: 3   EKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRR 60

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
           HT  KPF+C  C  K  R+  LK H  R H
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHT-RTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 59  CEYQTNTKIYIRRHMLKIHLR----QRNLECSL--CDSTFSDNMDLKKHIQRKHTNDRPF 112
           C Y    K Y +   L++H R    ++  +C    C+  FS +  LK+H QR+HT  +PF
Sbjct: 9   CAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHTGVKPF 67

Query: 113 SCNFCDYKSKTKYDITSHSLRKHSK---GDKPHKCTICE 148
            C  C      +    S  L+ H++   G+KP  C    
Sbjct: 68  QCKTCQ-----RKFSRSDHLKTHTRTHTGEKPFSCRWPS 101

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.7 bits (115), Expect = 1e-07
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 134 KHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEH 193
              +  + ++C +C +   + +E  +H       +    C +C  RF+      +H  E 
Sbjct: 9   SPVENKEVYQCRLCNAKLSSLLEQGSHE---RLCRNAAVCPYCSLRFFSPELKQEH--ES 63

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEA 229
               K   C  C    K +F + +H + +H  N  A
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMA 99

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.3 bits (93), Expect = 9e-05
 Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 51  QKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDR 110
           ++++ C LC  + ++ +    H     L +    C  C   F      ++H        +
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHE---RLCRNAAVCPYCSLRFFSPELKQEH--ESKCEYK 68

Query: 111 PFSCNFCDYKSKTKYDITSHSLRKHSK 137
             +C  C    K+ + I  H +  H++
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVEVHNQ 95

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 7/90 (7%)

Query: 228 EAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYG 287
           +  Y C  C+   SS     SH              C +C  +F      + H   +   
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCRNA-----AVCPYCSLRFFSPELKQEH--ESKCE 66

Query: 288 LKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ 317
            K   C  C     + F +  H   +H+  
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 196 NEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHA 255
           N++ ++C LC+ K     E   H  R+ ++       C YC     S  + + H +K   
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSH-ERLCRNAAV----CPYCSLRFFSPELKQEHESKC-- 65

Query: 256 NDEDKPFTCEHCDSKFCKKYDMKMHMSRAH 285
             E K  TC  C   F   + +  H    H
Sbjct: 66  --EYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
             P  C  C      K  +++H  R H   +PFKC++C +       L  H+ +      
Sbjct: 7   GHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 104 RKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILK 163
              ++  P  C+ C Y   +K  +  H  R H   D+P KC  C         L  H +K
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIH-ERIHC-TDRPFKCNYCSFDTKQPSNLSKH-MK 58

Query: 164 IHQGQTRFQCS 174
              G      S
Sbjct: 59  KFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHK 143
           +CS C  + S    L+ H +R H  DRPF CN+C + +K   +++ H ++K   GD    
Sbjct: 11  KCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKFH-GDMSGP 67

Query: 144 CT 145
            +
Sbjct: 68  SS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 165 HQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
                  +CS C      K     H    H  ++PFKC  CS+  K+   L +H ++  
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK-YFCGSCNFSCTSNTDLLEHVQT 340
            +     P KCS C Y C++K  L+ H  RIH   + + C  C+F     ++L +H++ 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLE 192
              S    P KC+ C  +  +K  L+ H  +IH     F+C++C       +  +KH ++
Sbjct: 2   SSGS-SGHPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKH-MK 58

Query: 193 HHTNEKPFKCT 203
               +     +
Sbjct: 59  KFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 47  SHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKH 106
           S        C  C Y  ++K  +R H  +IH   R  +C+ C        +L KH  +K 
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF 60

Query: 107 TNDRPFSC 114
             D     
Sbjct: 61  HGDMSGPS 68

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 21/102 (20%), Positives = 33/102 (32%), Gaps = 2/102 (1%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
            T    F+C  CS       EL  H +       +  +     +    S+   +S +  +
Sbjct: 14  FTGASKFRCKDCSAAYDTLVELTVH-MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME 72

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHM-SRAHYGLKPFKCS 294
              D  K   C +C   F    D+ +HM    HY       S
Sbjct: 73  GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 1/93 (1%)

Query: 163 KIHQGQTRFQCSFCDRRFYFKNECTKHYLE-HHTNEKPFKCTLCSYKAKRNFELKQHILR 221
            I  G ++F+C  C   +    E T H  E  H  +   +    + K       +  +  
Sbjct: 12  SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM 71

Query: 222 IHQDNIEAEYHCTYCDYICSSRTILKSHINKKH 254
             +++ +    C YC +   S   L  H+ K  
Sbjct: 72  EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.3 bits (96), Expect = 5e-05
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHM-SRAHY---GLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
             F C+ C + +    ++ +HM    HY     +    +   +    K  L     +  +
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 316 NQKYFCGSCNFSCTSNTDLLEH-VQTNH 342
            +   C  C  S  S  DL  H ++T H
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 4/112 (3%)

Query: 93  SDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYL 152
           S     K +     T    F C  C     T  ++T H        D  H+         
Sbjct: 2   SSGSSGKLY-GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 153 TKVELKNHIL--KIHQGQTRFQCSFCDRRFYFKNECTKHYL-EHHTNEKPFK 201
           +K   ++ +        Q   +C +C   F    + + H +   H  +    
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.2 bits (88), Expect = 6e-04
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 75  KIHLRQRNLECSLCDSTFSDNMDLKKHIQR-KHTNDRPFSCNFCDYKSKTKYDITS-HSL 132
            I        C  C + +   ++L  H+    H  D     +  + K  +K    S   +
Sbjct: 12  SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM 71

Query: 133 RKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQ 168
                  K  KC  C  ++ +  +L  H++K    Q
Sbjct: 72  EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ 107

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 48.0 bits (114), Expect = 2e-07
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 76  IHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYK--------SKTKYDI 127
           I   Q +     CD TFS   +L  H+  +H      + + C ++         K KY +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 128 TSHSLRKHSKGDKPHKCT 145
            +H +R H+ G+K    +
Sbjct: 79  VNH-IRVHT-GEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.7 bits (95), Expect = 6e-05
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 138 GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRR---FYFKNECTKHYLEHH 194
                    C+ T+ T  EL  H+   H G        C         K+   K+ L +H
Sbjct: 22  AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81

Query: 195 ----TNEKPFKCT 203
               T EK    +
Sbjct: 82  IRVHTGEKSGPSS 94

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 164 IHQGQTRFQCSFCDRRFYFKNECTKHYL-EHHTNEKPFKCTLCSYKAKRNFELKQHILRI 222
             +G+  ++C  C R +   +   +HY+  H  N K + C  C  +  R   +  H+ +I
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KI 62

Query: 223 H 223
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 259 DKPFTCEHCDSKFCKKYDMKMHM-SRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH 314
           +  + C+ C   +    +   H  +     +K + C FC  + T K  + +HV +I 
Sbjct: 8   EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 102 IQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHI 161
           ++     +  + C  C        +   H +  H +  K + C  C   +  K  +  H+
Sbjct: 1   MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 162 LKIHQG 167
            KI   
Sbjct: 61  -KIIHK 65

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 25/88 (28%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKY 319
           KPF C  C   F +   +  H+ R H G KPF C  C  K       K H   I      
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRH-RDIQHILPI 59

Query: 320 FCGSCNFSCTSNTDLLEHVQTNHIIVGE 347
                    + N  L   V     +VGE
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 140 KPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKP 199
           KP +C IC   +     L  HI + H G+  F C  C R+F   +E  +H    H    P
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQH--ILP 58

Query: 200 FKCTLCSYKAKRNFELKQHI--LRIH 223
                      +N+ L+  +  L+  
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 10/88 (11%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK--GDKP 141
           +C +C   FS +  L  H  R HT ++PF+C+ C      +    S   ++H       P
Sbjct: 5   QCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICG-----RKFARSDERKRHRDIQHILP 58

Query: 142 HKCTICESTYLTKVELKNHI--LKIHQG 167
                 E        L+N +  LK   G
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAE 230
           FQC  C R F   +  T H +  HT EKPF C +C  K  R+ E K+H   I        
Sbjct: 4   FQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHR-DIQH---ILP 58

Query: 231 YHCTYCDYICSSRTILKSHI 250
                 + + S    L++ +
Sbjct: 59  ILEDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 231 YHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKP 290
           + C  C    S    L +HI + H  +  KPF C+ C  KF +  + K H       + P
Sbjct: 4   FQCRICMRNFSRSDHLTTHI-RTHTGE--KPFACDICGRKFARSDERKRHR-DIQ-HILP 58

Query: 291 FKCSFCEYKCTTKFGLKSHVT--RIHSNQK 318
                 E   +  + L++ V   +    ++
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 198 KPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHAND 257
           KPF+C +C     R+  L  HI R H    E  + C  C    +     K H        
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHI-RTHTG--EKPFACDICGRKFARSDERKRHR-DIQH-- 55

Query: 258 EDKPFTCEHCDSKFCKKYDMKMHMS--RAHYGLK 289
              P   +  +    K Y ++  ++  +   G +
Sbjct: 56  -ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 137 KGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCS--FCDRRFYFKNECTKHYLEHH 194
                     C  TY     LK H L+ H G+  + C    C  +F   +E T+HY   H
Sbjct: 3   TATHTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKH 60

Query: 195 TNEKPFKCTLCSYKAKRNFELKQHILRIH 223
           T  +PF+C  C     R+  L  H+ + H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHM-KRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 59  CEYQTNTKIYIRRHMLKIHLR----QRNLECSL--CDSTFSDNMDLKKHIQRKHTNDRPF 112
           C+Y    K Y +   LK HLR    ++   C    C   F+ + +L +H  RKHT  RPF
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH-YRKHTGHRPF 66

Query: 113 SCNFCD 118
            C  CD
Sbjct: 67  QCQKCD 72

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 11/94 (11%)

Query: 105 KHTNDRPFSCNFCDYKSKTKYDITSH---SLRKHSKGDKPHKCTI--CESTYLTKVELKN 159
           K T         C  K+ TK   +SH    LR H+ G+KP+ C    C   +    EL  
Sbjct: 1   KRTATHTCDYAGCG-KTYTK---SSHLKAHLRTHT-GEKPYHCDWDGCGWKFARSDELTR 55

Query: 160 HILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEH 193
           H  + H G   FQC  CDR F   +    H   H
Sbjct: 56  H-YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 97  DLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVE 156
                 +      + F C FC       Y++  H  R H+  ++P+ C IC   +  +  
Sbjct: 4   GSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHE-RTHT-DERPYTCDICHKAFRRQDH 60

Query: 157 LKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCT 203
           L++H   IH  +  F+C  C + F        H    H         
Sbjct: 61  LRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVHK-TLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
              +K F C  C     +++ L  H  R H D  E  Y C  C      +  L+ H    
Sbjct: 12  SKTKKEFICKFCGRHFTKSYNLLIH-ERTHTD--ERPYTCDICHKAFRRQDHLRDH-RYI 67

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS 294
           H+   +KPF C+ C   FC+   + +H    H        +
Sbjct: 68  HSK--EKPFKCQECGKGFCQSRTLAVHK-TLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 37.8 bits (89), Expect = 6e-04
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 10/94 (10%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---GDK 140
            C  C   F+ + +L  H +R HT++RP++C+ C      K       LR H      +K
Sbjct: 19  ICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICH-----KAFRRQDHLRDHRYIHSKEK 72

Query: 141 PHKCTICESTYLTKVELKNHILKIHQGQTRFQCS 174
           P KC  C   +     L  H   +H   +    +
Sbjct: 73  PFKCQECGKGFCQSRTLAVH-KTLHMQTSSPTAA 105

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 8/71 (11%)

Query: 260 KPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVT---RIH 314
               C+   C   F  +  +  H    H   K F C   E  C   F  K H+    ++H
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP--EPACGKSFNFKKHLKEHMKLH 63

Query: 315 SNQK-YFCGSC 324
           S+ + Y C   
Sbjct: 64  SDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 88  CDSTFSDNMDLKKHIQRKHTNDRPFSCNF--CDYKSKTKYDITSHSLRKHSK---GDKPH 142
           C   FS+   L  H + +H + + FSC    C      K       L++H K     + +
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACG-----KSFNFKKHLKEHMKLHSDTRDY 69

Query: 143 KCTIC 147
            C   
Sbjct: 70  ICEFS 74

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 43.2 bits (103), Expect = 6e-06
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 140 KPHKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNE 197
           +P+ C +  C+  +     L  HI +IH GQ  FQC  C R F   +  T H +  HT E
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTGE 60

Query: 198 KPFKCTLCSYKAKRNFELKQHILRIH 223
           KPF C +C  K  R+ E K+H  +IH
Sbjct: 61  KPFACDICGRKFARSDERKRHT-KIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK 318
           KPF C  C   F +   +  H+ R H G KPF C  C  K       K H T+IH  QK
Sbjct: 33  KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRH-TKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.8 bits (94), Expect = 9e-05
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 260 KPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ 317
           +P+ C  E CD +F +   +  H+ R H G KPF+C  C    +    L +H  R H+ +
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTGE 60

Query: 318 K-YFCGSCNFSCTSNTDLLEHVQT 340
           K + C  C      + +   H + 
Sbjct: 61  KPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%)

Query: 197 EKPFKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKH 254
           E+P+ C +  C  +  ++  L +HI RIH    +  + C  C    S    L +HI + H
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHI-RIHTG--QKPFQCRICMRNFSRSDHLTTHI-RTH 57

Query: 255 ANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
             +  KPF C+ C  KF +  + K H  + H   K
Sbjct: 58  TGE--KPFACDICGRKFARSDERKRHT-KIHLRQK 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 43.2 bits (103), Expect = 7e-06
 Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
            +      C +C    +  + L +H    H    E  Y C  C      +  +  H+ + 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRH-KLSHSG--EKPYSCPVCGLRFKRKDRMSYHV-RS 57

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK 289
           H     KP+ C+ C   F +   +  H+ + H G  
Sbjct: 58  HDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS--NQ 317
               CE C   F   Y +  H   +H G KP+ C  C  +   K  +  HV R H     
Sbjct: 6   SGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVG 63

Query: 318 K-YFCGSC--NFSCTSNTDLLEHVQTNH 342
           K Y C SC   FS   +  L  H++  H
Sbjct: 64  KPYICQSCGKGFSRPDH--LNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 138 GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNE 197
           G     C IC   +     L  H    H G+  + C  C  RF  K+  + H +  H   
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGS 61

Query: 198 --KPFKCTLCSYKAKRNFELKQHILRIH 223
             KP+ C  C     R   L  HI ++H
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 11/89 (12%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK-----G 138
            C +C   F D   L +H +  H+ ++P+SC  C      +       +  H +      
Sbjct: 9   ACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCG-LRFKR----KDRMSYHVRSHDGSV 62

Query: 139 DKPHKCTICESTYLTKVELKNHILKIHQG 167
            KP+ C  C   +     L  HI ++H G
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 142 HKCTI--CESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYLEHHTNE 197
           + C    C   +    +LK H    H  Q  ++C    CD+RF   +   +H  + H   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAGY 59

Query: 198 KPFKCTLCSYKAKRNFELKQHILRIH 223
              K   CS+  K      +H+   H
Sbjct: 60  PCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 263 TCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVT---RIHSNQK- 318
             E+C   F K   +K+H   +H    P++C      C  +F L S +    ++H+    
Sbjct: 5   HFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEG--CDKRFSLPSRLKRHEKVHAGYPC 61

Query: 319 YFCGSCNFSCTSNTDLLEHVQTNH 342
               SC+F   + T  L+HV   H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 20/84 (23%), Positives = 28/84 (33%), Gaps = 5/84 (5%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNF--CDYKSKTKYDITSHSLRKHSKGDKP 141
               C   F  +  LK H Q  HT   P+ C    CD +      +  H  + H+ G   
Sbjct: 5   HFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHA-GYPC 61

Query: 142 HKCTICESTYLTKVELKNHILKIH 165
            K   C     T      H+ + H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 59  CEYQTNTKIYIRRHMLKIHLRQ----RNLECS--LCDSTFSDNMDLKKHIQRKHTNDRPF 112
           C ++   K + + + LK+H          EC    CD  FS    LK+H ++ H      
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCK 62

Query: 113 SCNFCDYKSKTKYDITSHSLRKH 135
             + C +  KT      H    H
Sbjct: 63  KDDSCSFVGKTWTLYLKHVAECH 85

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
           + F CE C   F ++  +K H  R+H   KP+ C  C    T +  L  H  +IHS
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIH 223
           F C  C R F  +    +HY   HTNEKP+ C LC+    R   L +H  +IH
Sbjct: 3   FVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 25/166 (15%), Positives = 46/166 (27%), Gaps = 35/166 (21%)

Query: 1   MKQEDEILNHSRECAFVSRLDDSYNFICILCNYH--AENFEN-IYLHLPSHFEQKLFSCD 57
           +K E+E   H         + D YN      +        +   Y H+  H    L + +
Sbjct: 437 VKLENEYALHRS-------IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH----LKNIE 485

Query: 58  LCE-YQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDL---KKHIQRKHTNDRPFS 113
             E       +++    L+  +R  +   +   S  +    L   K +I     ND  + 
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD---NDPKYE 542

Query: 114 CNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKN 159
                             L K             + T L ++ L  
Sbjct: 543 RLVNAIL---------DFLPKIE-----ENLICSKYTDLLRIALMA 574

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 197 EKPFKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKH 254
            +   C    C+   + N  +++H L  H       + C  C       + LK H    H
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKH-LHTHG---PRVHVCAECGKAFVESSKLKRHQ-LVH 57

Query: 255 ANDEDKPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVT- 311
               +KPF C  E C  +F   ++++ H+ R H G +P+ C F    C  KF   +++  
Sbjct: 58  TG--EKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDG--CNKKFAQSTNLKS 112

Query: 312 --RIHSNQK 318
               H+  K
Sbjct: 113 HILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 9/101 (8%)

Query: 129 SHSLRKHSK--GDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKN 184
           + ++RKH    G + H C  C   ++   +LK H   +H G+  FQC+F  C +RF    
Sbjct: 20  NSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDF 78

Query: 185 ECTKHYLEHHTNEKPFKCTL--CSYKAKRNFELKQHILRIH 223
               H +  HT ++P+ C    C+ K  ++  LK HI   H
Sbjct: 79  NLRTH-VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI-LTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.3 bits (98), Expect = 6e-05
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 13/89 (14%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVT---RIHSN 316
           +   C  C   F +   +K H    H G KPF+C+F    C  +F L  ++    RIH+ 
Sbjct: 33  RVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEG--CGKRFSLDFNLRTHVRIHTG 89

Query: 317 QK-YFCGS--CN--FSCTSNTDLLEHVQT 340
            + Y C    CN  F+ ++N  L  H+ T
Sbjct: 90  DRPYVCPFDGCNKKFAQSTN--LKSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 16/121 (13%)

Query: 88  CDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---GDKPHKC 144
           C   F DN  ++KH    H   R   C  C      K  + S  L++H     G+KP +C
Sbjct: 13  CTKMFRDNSAMRKH-LHTHG-PRVHVCAECG-----KAFVESSKLKRHQLVHTGEKPFQC 65

Query: 145 TI--CESTYLTKVELKNHILKIHQGQTRFQCSF--CDRRFYFKNECTKHYLEHHTNEKPF 200
           T   C   +     L+ H+ +IH G   + C F  C+++F        H L H    K  
Sbjct: 66  TFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH-AKAKNN 123

Query: 201 K 201
           +
Sbjct: 124 Q 124

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 217 QHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHAN-DEDKPFTCEHCDSKFCKKY 275
            H        +E  Y C YC +      +   H++ +H N   +  + C  C+    +  
Sbjct: 5   HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64

Query: 276 DMKMHMSRAHYGLKPFKCS 294
            +  H  + H G + FK +
Sbjct: 65  ALSEHNLKYHPGEENFKLT 83

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.1 bits (93), Expect = 9e-05
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 70  RRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTN---DRPFSCNFCDYKSKTKYD 126
             H  +    +   EC  C     D      H+  +H N   +  + C  C++ +K    
Sbjct: 6   HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65

Query: 127 ITSHSLRKHSKGDKPHKCTICESTYLTKVE 156
           ++ H+L+ H  G++  K T+ +    T  E
Sbjct: 66  LSEHNLKYHP-GEENFKLTMVKRNNQTIFE 94

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 38.2 bits (88), Expect = 6e-04
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 96  MDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHS--KGDKPHKCTICESTYLT 153
                H Q+    +  + C +C +++      T H   +H     +  + C  C      
Sbjct: 3   HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62

Query: 154 KVELKNHILKIHQGQTRFQCS 174
              L  H LK H G+  F+ +
Sbjct: 63  YDALSEHNLKYHPGEENFKLT 83

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 37.8 bits (87), Expect = 6e-04
 Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 3/76 (3%)

Query: 248 SHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK---PFKCSFCEYKCTTKF 304
            H + +     +  + C++C  +         H+   H  +     + C  C +      
Sbjct: 5   HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64

Query: 305 GLKSHVTRIHSNQKYF 320
            L  H  + H  ++ F
Sbjct: 65  ALSEHNLKYHPGEENF 80

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 37.4 bits (86), Expect = 8e-04
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 189 HYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQD-NIEAEYHCTYCDYICSSRTILK 247
           H  ++   E  ++C  C+++         H+   H +  + + Y C  C+++      L 
Sbjct: 8   HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67

Query: 248 SHINKKHA 255
            H  K H 
Sbjct: 68  EHNLKYHP 75

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC 296
             KP+ C+ C   F +   +  H+ + H   +P KC   
Sbjct: 9   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 21/103 (20%), Positives = 27/103 (26%), Gaps = 31/103 (30%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKK 253
           HT EKP+ C+ C  K    F  KQ  L +H                              
Sbjct: 10  HTGEKPYACSHCD-KT---FRQKQL-LDMHFKRYHDP----------------------- 41

Query: 254 HANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC 296
             N     F C  C   F ++  M  H      G    +    
Sbjct: 42  --NFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 7/70 (10%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYG----LKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
           KP+ C HCD  F +K  + MH  + ++        F CS C    T +  +  H     +
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARH-ADNCA 71

Query: 316 NQK-YFCGSC 324
                   + 
Sbjct: 72  GPDGVEGENS 81

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.7 bits (94), Expect = 2e-04
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVT-RIHSNQK 318
           +P+ C  C  KF  K+ +  HM + H G+KP++C+     C  +F  +      + S  K
Sbjct: 36  RPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECN----ICAKRFMWRDSFHRHVTSCTK 90

Query: 319 -YFCGSC--NFSCTSN 331
            Y       N +  S 
Sbjct: 91  SYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.7 bits (94), Expect = 2e-04
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 104 RKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILK 163
              + D+ + C  C      K     H +  H  G +P+ C +C   +  K  L  H +K
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHL-GLRPYGCGVCGKKFKMKHHLVGH-MK 58

Query: 164 IHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLC 205
           IH G   ++C+ C +RF +++   +H     +  K ++    
Sbjct: 59  IHTGIKPYECNICAKRFMWRDSFHRHV---TSCTKSYEAAKA 97

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSK---GDK 140
           +C +C  +F  +  L  H    H++ RP+ C +C      K       ++KH+    G+K
Sbjct: 3   DCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCG-----KRFHQKSDMKKHTFIHTGEK 56

Query: 141 PHKCTIC 147
           PHKC +C
Sbjct: 57  PHKCQVC 63

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 98

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 258 EDKPFTCEHCDSKFCKKYD-MKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN 316
           E     C  C+    K    +K HM          KC  C  +  +K GL  H    HS 
Sbjct: 21  ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80

Query: 317 QK 318
           + 
Sbjct: 81  KP 82

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 157 LKNHILKIHQGQTRFQCS--FCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFE 214
           L N++         + C    CDRRF   +E T+H    HT +KPF+C +C     R+  
Sbjct: 9   LLNYV---VPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDH 64

Query: 215 LKQHILRIH 223
           L  HI R H
Sbjct: 65  LTTHI-RTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 247 KSHINKKHANDEDKPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKF 304
             +    +   + +P+ C  E CD +F +  ++  H+ R H G KPF+C  C    +   
Sbjct: 5   PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSD 63

Query: 305 GLKSHVTRIHS 315
            L +H+ R H+
Sbjct: 64  HLTTHI-RTHT 73

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.75
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.7
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.68
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.64
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.6
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.6
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.5
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.5
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.49
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.49
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.48
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.45
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.44
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.43
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.43
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.43
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.42
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.42
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.41
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.4
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.38
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.36
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.35
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.34
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.33
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.32
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.31
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.3
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.3
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.29
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.27
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.26
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.02
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.01
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.0
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.99
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.99
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.91
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.9
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.89
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.88
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.88
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.86
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.86
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.85
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.83
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.82
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.81
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.81
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.8
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.77
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.77
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.76
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.75
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.72
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.71
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.71
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.7
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.7
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.69
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.68
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.67
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.67
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.67
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.61
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.48
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.45
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.4
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.39
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.34
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.31
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.27
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.26
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.21
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.19
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.17
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.13
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.09
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.03
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.0
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.0
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.0
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.0
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.95
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.94
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.93
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.93
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.89
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.88
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.87
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.85
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.85
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.84
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.83
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.82
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.82
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.82
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.81
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.8
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.0
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.79
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.79
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.95
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.75
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.75
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.72
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.71
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.71
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.71
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.7
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.84
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.83
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.63
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.63
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.79
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.78
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.52
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.51
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.46
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.16
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.26
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.79
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.63
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.5
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.14
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.11
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.4
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.0
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.57
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.23
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	93.06
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	88.89
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.38
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.96
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.61
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	85.35
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	84.87
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	84.49
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	84.44
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	83.17
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	82.56
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	81.77
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	80.58

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.5e-34  Score=235.94  Aligned_cols=179  Identities=27%  Similarity=0.561  Sum_probs=133.5

Q ss_pred             HHHHHHHhhhccCCCceecccccccccchhHHHhhhhhccCCCCccccCCCchhccCcHHHHHHHHHhcCCCCccceecC
Q psy10075        155 VELKNHILKIHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCT  234 (373)
Q Consensus       155 ~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~  234 (373)
                      ..|..|+ ..|.++++|.|+.|++.|.....|..|+ ..|.++++|.|+.|++.|.+...|..|+ ..|..  ..+|.|+
T Consensus         7 ~~l~~h~-~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~   81 (190)
T 2i13_A            7 SSSVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTG--EKPYKCP   81 (190)
T ss_dssp             -------------------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHH-HHHHC--CCCEECT
T ss_pred             ccchhhh-hhcCCCCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCC--CCCccCc
Confidence            4566775 6788888888888888888888888886 5677888899999999999988999997 55655  6789999


Q ss_pred             CCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        235 YCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       235 ~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      .|++.|.+...|..|+..++   ++++|.|++|++.|.+...|..|+ +.|.++++|.|++|++.|.+...|..|++.|+
T Consensus        82 ~C~~~f~~~~~l~~H~~~h~---~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  157 (190)
T 2i13_A           82 ECGKSFSQRANLRAHQRTHT---GEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHTHQRTHT  157 (190)
T ss_dssp             TTCCEESCHHHHHHHHHHHH---TCCCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             ccCCccCCHHHHHHHHHhcC---CCCCCcCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            99999999999999986443   378899999999999999999999 78889999999999999999999999998888


Q ss_pred             CCCcccCCCCCCCccChhHHHHHHHhhc
Q psy10075        315 SNQKYFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       315 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      ++.+|.|++|++.|.+..+|..|+++|+
T Consensus       158 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          158 GEKPYKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHhcC
Confidence            8889999999999999999999999984

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1e-33  Score=230.92  Aligned_cols=186  Identities=24%  Similarity=0.521  Sum_probs=130.7

Q ss_pred             hcccccceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCcc
Q psy10075          9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLC   88 (373)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   88 (373)
                      ..+.|..|+..+.++++|.|+.|++.|.+...|..|+..|.++++|.|+.|++.|.+...|..| +..|.++++|.|+.|
T Consensus         5 ~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C   83 (190)
T 2i13_A            5 GSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGEKPYKCPEC   83 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHH-HHHHHCCCCEECTTT
T ss_pred             hhccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHH-HHhcCCCCCccCccc
Confidence            3567888899999999999999999999999999999999999999999999999999999999 477888899999999


Q ss_pred             ccccCCchHHHHHHhhhcCCCCCcccCCCCccccChHHHHHhhhcccCCCCCCcccccccccccCHHHHHHHHhhhccCC
Q psy10075         89 DSTFSDNMDLKKHIQRKHTNDRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQ  168 (373)
Q Consensus        89 ~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  168 (373)
                      ++.|.+...|..|+ ..|.++.+|.|+.|++.|.+...|..|+ ..|. ++++|.|+.|++.|.....|..|+ ..|.++
T Consensus        84 ~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~  159 (190)
T 2i13_A           84 GKSFSQRANLRAHQ-RTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHT-GEKPYKCPECGKSFSREDNLHTHQ-RTHTGE  159 (190)
T ss_dssp             CCEESCHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHH-HHHH-CCCCEECTTTCCEESCHHHHHHHH-HHHHCC
T ss_pred             CCccCCHHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhC-CCCCeECCCCCcccCCHHHHHHHH-HhcCCC
Confidence            99999999999995 6788888899999999888888888884 4454 677888888888888888888886 678888


Q ss_pred             CceecccccccccchhHHHhhhhhccCCCCcc
Q psy10075        169 TRFQCSFCDRRFYFKNECTKHYLEHHTNEKPF  200 (373)
Q Consensus       169 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  200 (373)
                      ++|.|+.|++.|.....|..|+ ..|.+++||
T Consensus       160 ~~~~C~~C~~~f~~~~~L~~H~-~~H~~~k~~  190 (190)
T 2i13_A          160 KPYKCPECGKSFSRRDALNVHQ-RTHTGKKTS  190 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH-TTC------
T ss_pred             CCeECCCCCCccCCHHHHHHHH-HhcCCCCCC
Confidence            8888888888888888888886 556776664

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.5e-29  Score=206.33  Aligned_cols=167  Identities=28%  Similarity=0.517  Sum_probs=120.3

Q ss_pred             CCceec--ccccccccchhHHHhhhhhccCCCCcccc--CCCchhccCcHHHHHHHHHhcCCCCccceecC--CCccccc
Q psy10075        168 QTRFQC--SFCDRRFYFKNECTKHYLEHHTNEKPFKC--TLCSYKAKRNFELKQHILRIHQDNIEAEYHCT--YCDYICS  241 (373)
Q Consensus       168 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~--~C~~~f~  241 (373)
                      .++|.|  ..|++.|.....|..|+ ..|.++++|.|  +.|++.|.+...|..|+ +.|.+  +.+|.|+  .|++.|.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTG--EKNFTCDSDGCDLRFT   85 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTT--CCCEECCSSSCCCEES
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccC--CCceeCCCCCCCCccC
Confidence            445555  34555555555555554 33455556666  55666666666666665 44544  5666776  6777777


Q ss_pred             ChHHHhhhhhccCCCCCCCCeec--CCCCccccChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCCC
Q psy10075        242 SRTILKSHINKKHANDEDKPFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       242 ~~~~l~~H~~~~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      +...|..|+...|. .++++|.|  +.|++.|.+...|..|+ +.|+++++|.|++  |++.|.+.+.|..|++.|++  
T Consensus        86 ~~~~l~~H~~~~h~-~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--  161 (190)
T 1tf6_A           86 TKANMKKHFNRFHN-IKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--  161 (190)
T ss_dssp             CHHHHHHHHHTTSS-TTTSCCEECSSSSCEECSSHHHHHHHH-GGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--
T ss_pred             CHHHHHHHHHHhcC-CCcceeeCCCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--
Confidence            77777777643332 23678999  88999999999999998 7888999999988  99999999999999976665  


Q ss_pred             cccCCC---CCCCccChhHHHHHHHhhcc
Q psy10075        318 KYFCGS---CNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       318 ~~~C~~---C~~~f~~~~~l~~H~~~~H~  343 (373)
                       |.|..   |++.|.+...|..|+++||+
T Consensus       162 -~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          162 -YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             -CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             -CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence             88888   99999999999999998874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=3e-28  Score=198.55  Aligned_cols=169  Identities=28%  Similarity=0.539  Sum_probs=146.4

Q ss_pred             CCCCccc--ccccccccCHHHHHHHHhhhccCCCceec--ccccccccchhHHHhhhhhccCCCCccccC--CCchhccC
Q psy10075        138 GDKPHKC--TICESTYLTKVELKNHILKIHQGQTRFQC--SFCDRRFYFKNECTKHYLEHHTNEKPFKCT--LCSYKAKR  211 (373)
Q Consensus       138 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~  211 (373)
                      ..++|.|  +.|++.|.+...|..|+ ..|.++++|.|  ..|++.|.....|..|+ ..|.++++|.|+  .|++.|.+
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESC
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCC
Confidence            5678999  68999999999999997 78889999999  88999999999999996 668888999999  89999999


Q ss_pred             cHHHHHHHHHhcCCCCccceec--CCCcccccChHHHhhhhhccCCCCCCCCeecCC--CCccccChhHHHHhhhhhccC
Q psy10075        212 NFELKQHILRIHQDNIEAEYHC--TYCDYICSSRTILKSHINKKHANDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       212 ~~~l~~H~~~~h~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ...|..|+.+.|.. ...+|.|  +.|++.|.+...|..|+.. |  .+++||.|++  |+++|.....|..|+ +.|++
T Consensus        87 ~~~l~~H~~~~h~~-~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H--~~~~~~~C~~~~C~k~F~~~~~L~~H~-~~H~~  161 (190)
T 1tf6_A           87 KANMKKHFNRFHNI-KICVYVCHFENCGKAFKKHNQLKVHQFS-H--TQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG  161 (190)
T ss_dssp             HHHHHHHHHTTSST-TTSCCEECSSSSCEECSSHHHHHHHHGG-G--SSSCSSBCCSSSCCCBCSSHHHHHHHH-TSSCS
T ss_pred             HHHHHHHHHHhcCC-CcceeeCCCCCCccccCCHHHHHHHHHH-h--CCCCCccCCCCCCCchhcCHHHHHHHH-HHhCC
Confidence            99999998667732 2678999  8899999999999999864 3  3488999988  999999999999999 67877


Q ss_pred             CCCccCCC---CcccccchhhhhhhhhhccCC
Q psy10075        288 LKPFKCSF---CEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       288 ~~~~~C~~---C~~~f~~~~~l~~H~~~~h~~  316 (373)
                         |.|..   |++.|.+...|..|++.++++
T Consensus       162 ---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          162 ---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             ---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             ---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence               89999   999999999999999887753

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.8e-25  Score=174.76  Aligned_cols=142  Identities=23%  Similarity=0.446  Sum_probs=114.1

Q ss_pred             CccccCCCchhccCcHHHHHHHHHhcCCCCccceecCC-----CcccccChHHHhhhhhccCCCCCCCCeecCC--CCcc
Q psy10075        198 KPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTY-----CDYICSSRTILKSHINKKHANDEDKPFTCEH--CDSK  270 (373)
Q Consensus       198 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~  270 (373)
                      .+|.|+.|++.|.+...|..|+...|.....++|.|+.     |++.|.+...|..|+..++   ++++|.|++  |++.
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~---~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT---GEKPHKCTFEGCRKS   78 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH---CCCCCCCCSTTCCCC
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC---CCCCccCCCCCCCCc
Confidence            45667777777777777777765433333366666653     4588999999999986443   368899985  9999


Q ss_pred             ccChhHHHHhhhhhccCCCCccCCC--Ccccccchhhhhhhh-hhccCCCcccCCC--CCCCccChhHHHHHHHhhcc
Q psy10075        271 FCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHV-TRIHSNQKYFCGS--CNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       271 f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~  343 (373)
                      |.....|..|+ +.|.++++|.|++  |++.|.+...|..|+ +.|.++.+|.|++  |++.|.+...|..|++++|+
T Consensus        79 f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           79 YSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            99999999999 7899999999998  999999999999998 5666677799988  99999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1e-24  Score=171.56  Aligned_cols=145  Identities=30%  Similarity=0.592  Sum_probs=104.5

Q ss_pred             CcccccccccccCHHHHHHHHhh--hccCCCceecccccccccchhHHHhhhhhccCCCCccccCCCchhccCcHHHHHH
Q psy10075        141 PHKCTICESTYLTKVELKNHILK--IHQGQTRFQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTLCSYKAKRNFELKQH  218 (373)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  218 (373)
                      ++.|+.|++.|.+...|..|+..  .|.++++|.|.+|+                        |+.|++.|.+...|..|
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~------------------------C~~c~~~f~~~~~l~~H   58 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------------CSRELRPFKAQYMLVVH   58 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT------------------------CTTTTCCCSSHHHHHHH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC------------------------ccchhhhhhhHHHHHHH
Confidence            45566666666666666666532  34455555554432                        34445777777777777


Q ss_pred             HHHhcCCCCccceecCC--CcccccChHHHhhhhhccCCCCCCCCeecCC--CCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        219 ILRIHQDNIEAEYHCTY--CDYICSSRTILKSHINKKHANDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       219 ~~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      + +.|..  ..+|.|+.  |++.|.+...|..|+.. |  .++++|.|++  |++.|.+...|..|+++.|+++++|.|+
T Consensus        59 ~-~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A           59 M-RRHTG--EKPHKCTFEGCRKSYSRLENLKTHLRS-H--TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             T-HHHHC--CCCCCCCSTTCCCCCSSHHHHHHHHHH-T--TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred             H-HhcCC--CCCccCCCCCCCCcccCHHHHHHHHHH-c--CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            6 45554  56788874  88888888888888753 2  2377899988  9999999999999987788899999998


Q ss_pred             C--CcccccchhhhhhhhhhccC
Q psy10075        295 F--CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       295 ~--C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +  |++.|.+.+.|..|++.+|+
T Consensus       133 ~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          133 LPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             STTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCccccCCHHHHHHHHHhhcC
Confidence            8  99999999999999987764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=4.8e-23  Score=155.51  Aligned_cols=112  Identities=26%  Similarity=0.511  Sum_probs=60.8

Q ss_pred             ccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhh--hccCCCCccCCCCcccccchhh
Q psy10075        228 EAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSR--AHYGLKPFKCSFCEYKCTTKFG  305 (373)
Q Consensus       228 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~--~H~~~~~~~C~~C~~~f~~~~~  305 (373)
                      .++|.|+.|++.|.+...|..|+..++   ++++|.|++|++.|.+...|..|+..  .|.++++|.|++|++.|.+...
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~---~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHT---GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHS---SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCC---CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            344555555555555555555553221   24455555555555555555555532  2345555555555555555555


Q ss_pred             hhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhc
Q psy10075        306 LKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       306 l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      |..|++.|+++.+|.|++|++.|.+...|..|++..|
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            5555555555555666666666666666666655544

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.2e-22  Score=151.82  Aligned_cols=119  Identities=29%  Similarity=0.589  Sum_probs=110.1

Q ss_pred             CCCCccccCCCchhccCcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccCh
Q psy10075        195 TNEKPFKCTLCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKK  274 (373)
Q Consensus       195 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~  274 (373)
                      .++++|.|+.|++.|.+...|..|+ +.|..  ..+|.|+.|++.|.+...|..|+..++...++++|.|++|++.|...
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHN-RKHTG--EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHH-HHHSS--CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHH-HhCCC--CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            4778999999999999999999998 66766  78999999999999999999999877667779999999999999999


Q ss_pred             hHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        275 YDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       275 ~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      ..|..|+ +.|.++++|.|++|++.|.+...|..|++..|+++
T Consensus        80 ~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           80 MELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHH-HHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHH-HHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999 88999999999999999999999999998777764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.2e-22  Score=152.34  Aligned_cols=113  Identities=19%  Similarity=0.391  Sum_probs=93.9

Q ss_pred             ccccceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCcccc
Q psy10075         11 SRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDS   90 (373)
Q Consensus        11 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~   90 (373)
                      +.+..|..++.|+++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..| +.+|.++++|.|+.|++
T Consensus         8 ~h~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H-~~~H~~~k~~~C~~C~k   86 (133)
T 2lt7_A            8 KHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH-EIHHTGERRYQCLACGK   86 (133)
T ss_dssp             CCSSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHH-HHHHHTCCCEEESSSCC
T ss_pred             HHHhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhh-ccccCCCccccCCCCCC
Confidence            34566778888999999999999999999999999999999999999999999999999999 57899999999999999


Q ss_pred             ccCCchHHHHHHhhhcCC-----CCCcccCCCCccccCh
Q psy10075         91 TFSDNMDLKKHIQRKHTN-----DRPFSCNFCDYKSKTK  124 (373)
Q Consensus        91 ~f~~~~~l~~H~~~~h~~-----~~~~~C~~C~~~f~~~  124 (373)
                      .|.....|..|++..|.+     ..+|+|..|++.|...
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999997555543     2346666666665543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=1.1e-21  Score=147.93  Aligned_cols=111  Identities=25%  Similarity=0.596  Sum_probs=94.2

Q ss_pred             ccceecC--CCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCC--Ccccccch
Q psy10075        228 EAEYHCT--YCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTK  303 (373)
Q Consensus       228 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~  303 (373)
                      +++|.|+  .|++.|.+...|..|+..+    ++++|.|++|++.|.....|..|+ ..|.++++|.|.+  |++.|.+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h----~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~   77 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH----GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLD   77 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG----SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc----CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCH
Confidence            5678888  7999999999999998543    477899999999999999999998 7888889999986  99999999


Q ss_pred             hhhhhhhhhccCCCcccCC--CCCCCccChhHHHHHHHhhcc
Q psy10075        304 FGLKSHVTRIHSNQKYFCG--SCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       304 ~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      ..|..|++.|+++.+|.|+  .|++.|.+..+|..|+++|++
T Consensus        78 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           78 FNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            9999999888888889996  499999999999999998853

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=1.7e-22  Score=153.02  Aligned_cols=100  Identities=23%  Similarity=0.386  Sum_probs=74.6

Q ss_pred             ccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhh
Q psy10075        228 EAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLK  307 (373)
Q Consensus       228 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  307 (373)
                      +++|.|++|++.|.+...|..|++. |  .+++||.|++|+++|.....|..|+ +.|++++||.|++|++.|.+.+.|.
T Consensus        20 ek~y~C~~C~k~F~~~~~L~~H~~~-H--~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLRRHFNI-H--SWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHHHHHHH-H--HCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             CcCeECCCCCCCcCCHHHHHHHHHH-c--CCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCcCCHHHHH
Confidence            6778888888888888888888753 2  2367788888888888888888887 6777777888888888888888888


Q ss_pred             hhhhhccCCC------cccCCCCCCCccCh
Q psy10075        308 SHVTRIHSNQ------KYFCGSCNFSCTSN  331 (373)
Q Consensus       308 ~H~~~~h~~~------~~~C~~C~~~f~~~  331 (373)
                      .|++++|+++      +|+|.+|+..|...
T Consensus        96 ~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           96 SHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            8877777653      27777777776643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=8.2e-22  Score=147.56  Aligned_cols=110  Identities=27%  Similarity=0.643  Sum_probs=89.8

Q ss_pred             ccceecCC--CcccccChHHHhhhhhccCCCCCCCCeecC--CCCccccChhHHHHhhhhhccCCCCccCCCCcccccch
Q psy10075        228 EAEYHCTY--CDYICSSRTILKSHINKKHANDEDKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTK  303 (373)
Q Consensus       228 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~  303 (373)
                      +++|.|+.  |++.|.+...|..|+..+.   ++++|.|+  .|++.|.+...|..|+ ..|.++++|.|++|++.|.+.
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~---~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHT---GEKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRS   79 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHH---TTCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhC---CCCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCCccCCccCchhCCH
Confidence            56777875  8888888888888875332   36788888  6888888888888888 678888888888888888888


Q ss_pred             hhhhhhhhhccCCCcccC--CCCCCCccChhHHHHHHHhh
Q psy10075        304 FGLKSHVTRIHSNQKYFC--GSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       304 ~~l~~H~~~~h~~~~~~C--~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ..|..|++.|+++.+|.|  +.|++.|.+..+|..|+++|
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            888888888888888888  78888888888888888765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=4.6e-21  Score=150.53  Aligned_cols=79  Identities=27%  Similarity=0.519  Sum_probs=42.7

Q ss_pred             eecCCCCccccChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCCCcccCCC--CCCCccChhHHHHH
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQKYFCGS--CNFSCTSNTDLLEH  337 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~l~~H  337 (373)
                      |.|++|++.|.....|..|+ +.|.++++|.|.+  |++.|.+...|..|++.|+++.+|.|.+  |++.|.+...|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            45555555555555555555 4455555555554  5555555555555555554445555554  55555555555555


Q ss_pred             HHhh
Q psy10075        338 VQTN  341 (373)
Q Consensus       338 ~~~~  341 (373)
                      +++|
T Consensus       142 ~~~H  145 (155)
T 2rpc_A          142 MHVH  145 (155)
T ss_dssp             STTT
T ss_pred             HHHh
Confidence            5554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=7.2e-21  Score=149.40  Aligned_cols=123  Identities=25%  Similarity=0.405  Sum_probs=93.5

Q ss_pred             CCCccccCCCchhccCcHHHHHHHHHhcCCCCc------cceecCCCcccccChHHHhhhhhccCCCCCCCCeecCC--C
Q psy10075        196 NEKPFKCTLCSYKAKRNFELKQHILRIHQDNIE------AEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEH--C  267 (373)
Q Consensus       196 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~------~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C  267 (373)
                      ...+|.|+.|++.|.+...|..|+...|.....      ..|.|+.|++.|.+...|..|+..+   .++++|.|++  |
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~C~~~~C   98 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH---TGEKPFPCPFPGC   98 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHH---HCCCSEECSCTTT
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhc---CCCCcccCCcCCC
Confidence            455666666776666666666666444544211      1277888888888888888888643   2377889987  9


Q ss_pred             CccccChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCCCcccCC
Q psy10075        268 DSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQKYFCG  322 (373)
Q Consensus       268 ~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~  322 (373)
                      ++.|.....|..|+ +.|.++++|.|.+  |++.|.+...|..|++.|+++.+|.|.
T Consensus        99 ~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           99 GKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCccCCHHHHHHHH-HhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999998 7888888899987  999999999999998888888888885

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=1.6e-20  Score=141.54  Aligned_cols=116  Identities=26%  Similarity=0.588  Sum_probs=95.0

Q ss_pred             CCCccccC--CCchhccCcHHHHHHHHHhcCCCCccceecCCCcccccChHHHhhhhhccCCCCCCCCeecCC--CCccc
Q psy10075        196 NEKPFKCT--LCSYKAKRNFELKQHILRIHQDNIEAEYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEH--CDSKF  271 (373)
Q Consensus       196 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f  271 (373)
                      ++++|.|+  .|++.|.+...|..|+ ..| .  ..+|.|+.|++.|.+...|..|+.. |  .++++|.|++  |++.|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~--~~~~~C~~C~~~f~~~~~l~~H~~~-h--~~~~~~~C~~~~C~~~f   74 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHL-HTH-G--PRVHVCAECGKAFVESSKLKRHQLV-H--TGEKPFQCTFEGCGKRF   74 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHH-GGG-S--CCCEECTTTCCEESSHHHHHHHGGG-T--SCCCCEECCSTTCCCEE
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHH-HHc-C--CCCeECCCCCchhCCHHHHHHHHHH-c--CCCCCeeCCCCCCcCcc
Confidence            35678898  7999999999999997 566 3  6889999999999999999999863 3  3478999986  99999


Q ss_pred             cChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCCCcc
Q psy10075        272 CKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQKY  319 (373)
Q Consensus       272 ~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~  319 (373)
                      .....|..|+ +.|.++++|.|++  |++.|.+.+.|..|+++|++++++
T Consensus        75 ~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           75 SLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             SCHHHHHHHH-HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CCHHHHHHHH-HHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999 8899999999965  999999999999999888877654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=9.7e-21  Score=141.67  Aligned_cols=112  Identities=32%  Similarity=0.624  Sum_probs=94.1

Q ss_pred             CCCCccccCC--CchhccCcHHHHHHHHHhcCCCCccceecC--CCcccccChHHHhhhhhccCCCCCCCCeecCCCCcc
Q psy10075        195 TNEKPFKCTL--CSYKAKRNFELKQHILRIHQDNIEAEYHCT--YCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSK  270 (373)
Q Consensus       195 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~  270 (373)
                      .++++|.|++  |++.|.+...|..|+ +.|..  .++|.|+  .|++.|.+...|..|+..++   ++++|.|++|++.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~---~~~~~~C~~C~~~   75 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTG--EKPYQCDFKDCERRFSRSDQLKRHQRRHT---GVKPFQCKTCQRK   75 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH-HHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHH---CCCCEECTTTCCE
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH-HhhCC--CCCccCCCCCCcCccCCHHHHHHHHHHcC---CCCCccCCccCch
Confidence            4677888886  888888888888887 55655  6788888  69999998889988886432   3788999999999


Q ss_pred             ccChhHHHHhhhhhccCCCCccC--CCCcccccchhhhhhhhhhc
Q psy10075        271 FCKKYDMKMHMSRAHYGLKPFKC--SFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       271 f~~~~~L~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  313 (373)
                      |.....|..|+ +.|.++++|.|  +.|++.|.+...|..|+++|
T Consensus        76 f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           76 FSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ESCHHHHHHHH-HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             hCCHHHHHHHH-HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999 78889999999  78999999999999998654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=6.4e-19  Score=126.25  Aligned_cols=88  Identities=27%  Similarity=0.633  Sum_probs=76.3

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHH
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLE  336 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~  336 (373)
                      .++++|.|++|++.|.....|..|+ +.|.++++|.|++|++.|.+...|..|++.|+++.+|.|++|++.|.+...|..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            3578899999999999999999998 788888899999999999999999999988888888999999999999999999


Q ss_pred             HHHhhcccc
Q psy10075        337 HVQTNHIIV  345 (373)
Q Consensus       337 H~~~~H~~~  345 (373)
                      |+++|++..
T Consensus        83 H~~~h~~~~   91 (96)
T 2dmd_A           83 HLRSHTGDS   91 (96)
T ss_dssp             HHTTCCSCC
T ss_pred             HHHHhcCCC
Confidence            999887543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=3.7e-18  Score=124.64  Aligned_cols=86  Identities=22%  Similarity=0.505  Sum_probs=78.0

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHH
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLE  336 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~  336 (373)
                      .++++|.|++|++.|.....|..|+ +.|.++++|.|.+|++.|.+...|..|++.|+++.+|.|.+|++.|.+...|..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            4478899999999999999999999 788889999999999999999999999988888888999999999999999999


Q ss_pred             HHHhhcc
Q psy10075        337 HVQTNHI  343 (373)
Q Consensus       337 H~~~~H~  343 (373)
                      |+++|++
T Consensus        92 H~~~H~~   98 (106)
T 2ee8_A           92 HKTLHMQ   98 (106)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhCC
Confidence            9999853

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=9.3e-19  Score=121.45  Aligned_cols=81  Identities=20%  Similarity=0.530  Sum_probs=72.8

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQT  340 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  340 (373)
                      ||.|++|++.|.....|..|+ ..|.++++|.|+.|++.|.+...|..|++.++++.+|.|++|++.|.+..+|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            588999999999999999999 7788888999999999999999999999888888889999999999999999999988


Q ss_pred             hc
Q psy10075        341 NH  342 (373)
Q Consensus       341 ~H  342 (373)
                      |+
T Consensus        80 H~   81 (82)
T 2kmk_A           80 HT   81 (82)
T ss_dssp             HC
T ss_pred             hC
Confidence            75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=4.1e-18  Score=121.78  Aligned_cols=86  Identities=26%  Similarity=0.539  Sum_probs=77.7

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCC--CcccCCCCCCCccChhHH
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN--QKYFCGSCNFSCTSNTDL  334 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~--~~~~C~~C~~~f~~~~~l  334 (373)
                      .++++|.|++|++.|.....|..|+ ..|.++++|.|++|++.|.+...|..|++.+++.  .+|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHH-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            4578999999999999999999999 7888999999999999999999999999888876  679999999999999999


Q ss_pred             HHHHHhhcc
Q psy10075        335 LEHVQTNHI  343 (373)
Q Consensus       335 ~~H~~~~H~  343 (373)
                      ..|++..|.
T Consensus        82 ~~H~~~~H~   90 (95)
T 2yt9_A           82 NGHIKQVHS   90 (95)
T ss_dssp             HHHHHHTSC
T ss_pred             HHHHHHhcC
Confidence            999986663

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=1.8e-18  Score=122.27  Aligned_cols=84  Identities=23%  Similarity=0.593  Sum_probs=75.4

Q ss_pred             CCCeecC--CCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHH
Q psy10075        259 DKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLE  336 (373)
Q Consensus       259 ~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~  336 (373)
                      ++||.|+  .|++.|.....|..|+ +.|.++++|.|+.|++.|.+...|..|++.|+++.+|.|++|++.|.+...|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            6789998  5999999999999999 788888999999999999999999999988888888999999999999999999


Q ss_pred             HHHhhcc
Q psy10075        337 HVQTNHI  343 (373)
Q Consensus       337 H~~~~H~  343 (373)
                      |+++|++
T Consensus        81 H~~~H~~   87 (90)
T 1a1h_A           81 HTKIHLR   87 (90)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhcc
Confidence            9998854

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=2e-18  Score=128.05  Aligned_cols=100  Identities=17%  Similarity=0.190  Sum_probs=84.5

Q ss_pred             hHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhh--ccCCCCc-cCCCCcccc--cchhhhhhhhhhccCCC
Q psy10075        243 RTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRA--HYGLKPF-KCSFCEYKC--TTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       243 ~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~--H~~~~~~-~C~~C~~~f--~~~~~l~~H~~~~h~~~  317 (373)
                      ...|..|++ .|  .++++|.|++|++.|.....|..|+ +.  |.+.+++ .|.+|++.|  .+...|..|++.|.++.
T Consensus         4 ~~~l~~H~~-~H--~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            4 GSSGKLYGS-IF--TGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCC-CC--CCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             chhhhhhee-ee--CCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            345677874 33  4489999999999999999999999 55  6566654 599999998  89999999998888888


Q ss_pred             cccCCCCCCCccChhHHHHHHHhhccccc
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTNHIIVG  346 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  346 (373)
                      +|.|++|++.|....+|..|++++|....
T Consensus        80 ~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           80 VLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             ceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            89999999999999999999999987544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.5e-18  Score=124.23  Aligned_cols=87  Identities=26%  Similarity=0.514  Sum_probs=81.0

Q ss_pred             CCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHH
Q psy10075        256 NDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLL  335 (373)
Q Consensus       256 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~  335 (373)
                      +.++++|.| .|++.|.....|..|+ +.|.++++|.|++|++.|.+...|..|++.|+++.+|.|++|++.|.....|.
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            355899999 9999999999999999 78999999999999999999999999998888888999999999999999999


Q ss_pred             HHHHhhccc
Q psy10075        336 EHVQTNHII  344 (373)
Q Consensus       336 ~H~~~~H~~  344 (373)
                      .|++.+|..
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            999999763

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=8.8e-18  Score=122.80  Aligned_cols=99  Identities=16%  Similarity=0.272  Sum_probs=85.7

Q ss_pred             ccceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCcccccc
Q psy10075         13 ECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTF   92 (373)
Q Consensus        13 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f   92 (373)
                      -..+++.+.++++|.|+.|++.|.+...|..|++.|  .++|.|..|++.|.....|..|+ . |.++++|.|+.|++.|
T Consensus         4 ~ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f   79 (107)
T 1wjp_A            4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTF   79 (107)
T ss_dssp             CCCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEEC
T ss_pred             ccccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchh
Confidence            345677888899999999999999999999999888  36899999999999999999995 4 8888999999999999


Q ss_pred             CCchHHHHHHhhhcCCCCCcccC
Q psy10075         93 SDNMDLKKHIQRKHTNDRPFSCN  115 (373)
Q Consensus        93 ~~~~~l~~H~~~~h~~~~~~~C~  115 (373)
                      .....|..|++.+|.++++|.+.
T Consensus        80 ~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           80 KSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999976689888888764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.70  E-value=6.2e-19  Score=124.02  Aligned_cols=87  Identities=29%  Similarity=0.452  Sum_probs=80.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHH
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHV  338 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~  338 (373)
                      ++||.|++|++.|.....|..|+ +.|.++++|.|++|++.|.+...|..|++.+++ .+|.|+.|++.|.+..+|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            47899999999999999999999 789999999999999999999999999987774 6799999999999999999999


Q ss_pred             Hhhcccccc
Q psy10075        339 QTNHIIVGE  347 (373)
Q Consensus       339 ~~~H~~~~~  347 (373)
                      +.+|+..++
T Consensus        79 ~~~h~~~~~   87 (88)
T 1llm_C           79 ARLKKLVGE   87 (88)
T ss_dssp             HHHHHHTCC
T ss_pred             HHHHHHhcC
Confidence            999987654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=5.8e-17  Score=118.25  Aligned_cols=94  Identities=22%  Similarity=0.494  Sum_probs=79.1

Q ss_pred             cCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHH
Q psy10075         19 RLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDL   98 (373)
Q Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l   98 (373)
                      ...++++|.|+.|++.|.+...|..|++.|.++++|.|..|++.|.....|..| +..|.++++|.|..|++.|.....|
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPFKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHH-GGGSCCCCTTSCSSSCCCCSSHHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHH-HHHhCCCCCeECCCcCCcccCHHHH
Confidence            345677888999999998888899998888888889999999999888899999 5778888888999999999888888


Q ss_pred             HHHHhhhcCCCCCccc
Q psy10075         99 KKHIQRKHTNDRPFSC  114 (373)
Q Consensus        99 ~~H~~~~h~~~~~~~C  114 (373)
                      ..|+ ++|.++++|..
T Consensus        90 ~~H~-~~H~~~~~~~~  104 (106)
T 2ee8_A           90 AVHK-TLHMQTSSPTA  104 (106)
T ss_dssp             HHHH-HHTTSCCCCCC
T ss_pred             HHHH-HHhCCCCCCcC
Confidence            8884 77888877653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=5.1e-17  Score=115.99  Aligned_cols=89  Identities=24%  Similarity=0.419  Sum_probs=76.1

Q ss_pred             CCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccC--CccccCccccccCCchHH
Q psy10075         21 DDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQ--RNLECSLCDSTFSDNMDL   98 (373)
Q Consensus        21 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~--~~~~C~~C~~~f~~~~~l   98 (373)
                      .++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+ ..|.+.  ++|.|+.|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCceECCCccchhCCHHHH
Confidence            46788999999999999999999999998888999999999999999999994 666665  789999999999999999


Q ss_pred             HHHHhhhcCCCC
Q psy10075         99 KKHIQRKHTNDR  110 (373)
Q Consensus        99 ~~H~~~~h~~~~  110 (373)
                      ..|++..|.++.
T Consensus        82 ~~H~~~~H~~~~   93 (95)
T 2yt9_A           82 NGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHTSCCCS
T ss_pred             HHHHHHhcCCCC
Confidence            999777887653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=7.1e-17  Score=115.48  Aligned_cols=89  Identities=25%  Similarity=0.537  Sum_probs=75.6

Q ss_pred             CCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHHH
Q psy10075         20 LDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLK   99 (373)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~   99 (373)
                      ..++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..| +..|.++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHH-HHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHH-HHHhCCCCCccCCCCCCccCCHHHHH
Confidence            45778899999999999999999999988888889999999999999999999 46788888899999999999989998


Q ss_pred             HHHhhhcCCCC
Q psy10075        100 KHIQRKHTNDR  110 (373)
Q Consensus       100 ~H~~~~h~~~~  110 (373)
                      .|+ ++|.++.
T Consensus        82 ~H~-~~h~~~~   91 (96)
T 2dmd_A           82 VHL-RSHTGDS   91 (96)
T ss_dssp             HHH-TTCCSCC
T ss_pred             HHH-HHhcCCC
Confidence            885 5666654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.67  E-value=1.3e-16  Score=115.05  Aligned_cols=85  Identities=26%  Similarity=0.614  Sum_probs=76.9

Q ss_pred             CCCCCeecCC--CCccccChhHHHHhhhhhccCCCCccCC--CCcccccchhhhhhhhhhccCCCcccCCCCCCCccChh
Q psy10075        257 DEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCS--FCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNT  332 (373)
Q Consensus       257 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~  332 (373)
                      ...++|.|..  |++.|.....|..|+ +.|.++++|.|+  .|++.|.+...|..|++.|+++.+|.|++|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            3467899996  999999999999999 788899999997  59999999999999998888888899999999999999


Q ss_pred             HHHHHHHhhc
Q psy10075        333 DLLEHVQTNH  342 (373)
Q Consensus       333 ~l~~H~~~~H  342 (373)
                      .|..|+++|.
T Consensus        90 ~l~~H~~~H~   99 (100)
T 2ebt_A           90 HLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            9999999884

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=2.7e-17  Score=121.95  Aligned_cols=94  Identities=17%  Similarity=0.250  Sum_probs=61.9

Q ss_pred             cccccceeecCCCCcceecCCCCccccChhhHhhcccc--CCCCCccc-cCcCcccc--cchHHHHHHhhhhhccCCccc
Q psy10075         10 HSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPS--HFEQKLFS-CDLCEYQT--NTKIYIRRHMLKIHLRQRNLE   84 (373)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~   84 (373)
                      .+.|..|++.|.+++||.|+.|++.|.+...|..|++.  |.+.+++. |+.|++.|  .....|..| +.+|.++++|.
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H-~~~H~~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM-EGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCC-CCSCCCCSSCB
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHH-hhccCCCcceE
Confidence            45666777777777777777777777777777777665  54444433 66776666  666666666 35566666667


Q ss_pred             cCccccccCCchHHHHHHhh
Q psy10075         85 CSLCDSTFSDNMDLKKHIQR  104 (373)
Q Consensus        85 C~~C~~~f~~~~~l~~H~~~  104 (373)
                      |+.|++.|.....|..|++.
T Consensus        83 C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHH
Confidence            77777767666666666533

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=4.8e-17  Score=112.71  Aligned_cols=82  Identities=27%  Similarity=0.598  Sum_probs=69.0

Q ss_pred             ceecCCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhh
Q psy10075        230 EYHCTYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSH  309 (373)
Q Consensus       230 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  309 (373)
                      ||.|+.|++.|.+...|..|+..+.   ++++|.|+.|++.|.....|..|+ ..|.++++|.|+.|++.|.+.+.|..|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~---~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS---DTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH---TCCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcC---CCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHH
Confidence            5788888888888888888886432   377899999999999999999999 788888999999999999999999999


Q ss_pred             hhhccC
Q psy10075        310 VTRIHS  315 (373)
Q Consensus       310 ~~~~h~  315 (373)
                      ++.|++
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            877653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=5e-17  Score=118.75  Aligned_cols=82  Identities=17%  Similarity=0.344  Sum_probs=60.0

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHH
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLE  336 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~  336 (373)
                      .++++|.|++|++.|.....|..|+ +.|  .++|.|.+|++.|.+...|..|+ +|.++.+|.|.+|++.|....+|..
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~H--~~~~~C~~C~~~f~~~~~l~~H~-~H~~~~~~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHE-RLC--RNAAVCPYCSLRFFSPELKQEHE-SKCEYKKLTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHH-HHH--HHSBCCTTTCCCBSSHHHHHHHH-HHCSTGGGEEGGGTEECSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHH-HHC--CCCccCCCCCCccCCHHHHHHHH-HcCCCCCccCccccchhCCHHHHHH
Confidence            3467777777777777777777777 445  35777777777777777777777 4666666778778877777777888


Q ss_pred             HHHhhc
Q psy10075        337 HVQTNH  342 (373)
Q Consensus       337 H~~~~H  342 (373)
                      |++..|
T Consensus        88 H~~~~H   93 (107)
T 1wjp_A           88 HQVEVH   93 (107)
T ss_dssp             HHHHTS
T ss_pred             HHHHHc
Confidence            877444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=8e-17  Score=113.45  Aligned_cols=82  Identities=24%  Similarity=0.583  Sum_probs=59.3

Q ss_pred             CCCeecCC--CCccccChhHHHHhhhhhccCCCCccCC--CCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHH
Q psy10075        259 DKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCS--FCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDL  334 (373)
Q Consensus       259 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l  334 (373)
                      .++|.|+.  |++.|.....|..|+ ..|.++++|.|+  .|++.|.+...|..|++.|+++.+|.|+.|++.|.+..+|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            45677777  777777777777777 667777777776  3777777777777777666666677777777777777777


Q ss_pred             HHHHHhh
Q psy10075        335 LEHVQTN  341 (373)
Q Consensus       335 ~~H~~~~  341 (373)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            7777665

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.64  E-value=1.4e-16  Score=101.64  Aligned_cols=56  Identities=23%  Similarity=0.562  Sum_probs=48.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      |+||.|++||++|...+.|..|+ +.|++++||.|.+|++.|...+.|..|+++|.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            68899999999999999999998 788899999999999999989999999865544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.64  E-value=1.6e-16  Score=112.10  Aligned_cols=85  Identities=20%  Similarity=0.485  Sum_probs=70.7

Q ss_pred             CcceecC--CCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHHHH
Q psy10075         23 SYNFICI--LCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKK  100 (373)
Q Consensus        23 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~  100 (373)
                      ++||.|+  .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..| +..|.++++|.|+.|++.|.....|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH-HHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHH-HHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            5688887  5999998888888888888888888898898888888888888 467888888888888888888888888


Q ss_pred             HHhhhcCCC
Q psy10075        101 HIQRKHTND  109 (373)
Q Consensus       101 H~~~~h~~~  109 (373)
                      |+ ++|.++
T Consensus        81 H~-~~H~~~   88 (90)
T 1a1h_A           81 HT-KIHLRQ   88 (90)
T ss_dssp             HH-GGGGC-
T ss_pred             HH-HHhccc
Confidence            85 667665

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=2.3e-16  Score=110.03  Aligned_cols=78  Identities=29%  Similarity=0.580  Sum_probs=71.3

Q ss_pred             Ceec--CCCCccccChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCCCcccCCC---CCCCccChhH
Q psy10075        261 PFTC--EHCDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQKYFCGS---CNFSCTSNTD  333 (373)
Q Consensus       261 ~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~---C~~~f~~~~~  333 (373)
                      ||.|  +.|++.|.....|..|+ +.|.++++|.|++  |++.|.+...|..|++.|++   |.|..   |++.|.+..+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5889  88999999999999999 7888999999988  99999999999999977777   99999   9999999999


Q ss_pred             HHHHHHhhc
Q psy10075        334 LLEHVQTNH  342 (373)
Q Consensus       334 l~~H~~~~H  342 (373)
                      |..|+++||
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999876

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.4e-16  Score=113.13  Aligned_cols=85  Identities=20%  Similarity=0.422  Sum_probs=70.5

Q ss_pred             ecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchH
Q psy10075         18 SRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMD   97 (373)
Q Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~   97 (373)
                      ..|.++++|.| .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..| +..|.++++|.|+.|++.|.....
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTGIKPYECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHH-HTTTCCCCCEECSSSCCEESCHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHH-HHHcCCCCCeeCCCCcchhcCHHH
Confidence            35677888888 8888888888888888888888888888888888888888888 467778888888888888888888


Q ss_pred             HHHHHhh
Q psy10075         98 LKKHIQR  104 (373)
Q Consensus        98 l~~H~~~  104 (373)
                      |..|++.
T Consensus        81 l~~H~~~   87 (110)
T 2csh_A           81 FHRHVTS   87 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.4e-15  Score=104.33  Aligned_cols=72  Identities=22%  Similarity=0.417  Sum_probs=61.5

Q ss_pred             CCCCCeecCC--CCccccChhHHHHhhhhhccCCCCccCCC--CcccccchhhhhhhhhhccCCCcccCCCCCCCc
Q psy10075        257 DEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSC  328 (373)
Q Consensus       257 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f  328 (373)
                      .++++|.|..  |++.|.+...|..|++..|.++++|.|++  |++.|.+...|..|++.|+++.+|.|.+|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3577888886  99999999999999844788888999988  999999999999998888888889999998887

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.58  E-value=4e-15  Score=104.61  Aligned_cols=82  Identities=30%  Similarity=0.688  Sum_probs=72.5

Q ss_pred             ccceecCC--CcccccChHHHhhhhhccCCCCCCCCeecC--CCCccccChhHHHHhhhhhccCCCCccCCCCcccccch
Q psy10075        228 EAEYHCTY--CDYICSSRTILKSHINKKHANDEDKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTK  303 (373)
Q Consensus       228 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~  303 (373)
                      .++|.|+.  |++.|.+...|..|+.. |  .++++|.|+  .|++.|.....|..|+ ..|.++++|.|+.|++.|.+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRT-H--TGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRS   78 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTT-S--CSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHh-c--CCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCH
Confidence            56799998  99999999999999863 3  347899997  5999999999999999 889999999999999999999


Q ss_pred             hhhhhhhhhc
Q psy10075        304 FGLKSHVTRI  313 (373)
Q Consensus       304 ~~l~~H~~~~  313 (373)
                      +.|..|++.|
T Consensus        79 ~~l~~H~~~H   88 (89)
T 2wbs_A           79 DHLALHMKRH   88 (89)
T ss_dssp             HHHHHHGGGG
T ss_pred             HHHHHHHHhh
Confidence            9999999665

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=1.7e-15  Score=96.59  Aligned_cols=56  Identities=20%  Similarity=0.446  Sum_probs=53.3

Q ss_pred             CCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhc
Q psy10075        287 GLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      .++||.|.+|++.|.+.+.|..|+++|.++.+|.|.+|++.|....+|..|+++|.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence            47999999999999999999999999889999999999999999999999999983

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=6.1e-16  Score=108.55  Aligned_cols=82  Identities=21%  Similarity=0.365  Sum_probs=67.0

Q ss_pred             CcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHHHHHH
Q psy10075         23 SYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHI  102 (373)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  102 (373)
                      ++||.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+ ..|.+ .++.|+.|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH-HHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHH-HHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            367888888888888888888888888888888888888888888888885 44433 6788888888888888888887


Q ss_pred             hhhc
Q psy10075        103 QRKH  106 (373)
Q Consensus       103 ~~~h  106 (373)
                      +..|
T Consensus        79 ~~~h   82 (88)
T 1llm_C           79 ARLK   82 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.4e-14  Score=101.13  Aligned_cols=80  Identities=25%  Similarity=0.380  Sum_probs=63.0

Q ss_pred             HhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCC---CCccCCCCcccccchhhhhhhhhhccCCCcccCC
Q psy10075        246 LKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL---KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCG  322 (373)
Q Consensus       246 l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  322 (373)
                      +..|++ .  +.++++|.|++|++.|.....|..|++..|...   ++|.|.+|++.|.+...|..|++.++++.++.|.
T Consensus         3 ~~~H~~-~--H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            3 SGSSGR-T--HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TTCCST-T--CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             cccccc-e--ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            445664 2  234788899999999988888999985555553   7889999999998888999998888888888888


Q ss_pred             CCCCCc
Q psy10075        323 SCNFSC  328 (373)
Q Consensus       323 ~C~~~f  328 (373)
                      .|+.+|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            888765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.5e-14  Score=103.06  Aligned_cols=69  Identities=12%  Similarity=0.245  Sum_probs=50.2

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhc---cCCCCccCCCCcccccchhhhhhh-hhhccCCCcccCCCCC
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAH---YGLKPFKCSFCEYKCTTKFGLKSH-VTRIHSNQKYFCGSCN  325 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~C~~C~  325 (373)
                      .+++||.|+.|++.|...+.|..|++..|   ++++||.|..|++.|.+++.|..| ++.|.++++|.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            45777777777777777777777774457   456777777777777777777777 5666666677777644

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.50  E-value=2.7e-14  Score=102.71  Aligned_cols=85  Identities=21%  Similarity=0.507  Sum_probs=70.1

Q ss_pred             CCCcceecCC--CCccccChhhHhhccccCCCCCccccC--cCcccccchHHHHHHhhhhhccCCccccCccccccCCch
Q psy10075         21 DDSYNFICIL--CNYHAENFENIYLHLPSHFEQKLFSCD--LCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNM   96 (373)
Q Consensus        21 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~   96 (373)
                      ...++|.|..  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..| +..|.++++|.|+.|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH-YRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHH-HHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHH-HHHhCCCCCeECCCCcCccCCHH
Confidence            3566788886  888888888888888888888888885  588888888888888 47788888888888888888888


Q ss_pred             HHHHHHhhhcC
Q psy10075         97 DLKKHIQRKHT  107 (373)
Q Consensus        97 ~l~~H~~~~h~  107 (373)
                      .|..|+ ++|.
T Consensus        90 ~l~~H~-~~H~   99 (100)
T 2ebt_A           90 HLALHM-KRHQ   99 (100)
T ss_dssp             HHHHHH-HHHC
T ss_pred             HHHHHH-HHhC
Confidence            888885 5554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.1e-14  Score=96.97  Aligned_cols=64  Identities=25%  Similarity=0.486  Sum_probs=53.4

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccC
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFC  321 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C  321 (373)
                      .++++|.|++|++.|.....|..|+ +.|.++++|.|++|++.|.....|..|++.|+++.+|.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3477888888888888888888888 778888888888888888888888888887777777877

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.49  E-value=1.4e-15  Score=115.05  Aligned_cols=70  Identities=23%  Similarity=0.402  Sum_probs=55.8

Q ss_pred             cChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhcccc
Q psy10075        272 CKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIV  345 (373)
Q Consensus       272 ~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  345 (373)
                      .....|..|+  .|++++||.|.+|++.|.+...|..|++.|  ..+|.|++|++.|....+|..|+++||++.
T Consensus        58 ~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           58 DESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             TTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            3566666666  366788888888888888888888888665  677888888888888888888888887653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=9.6e-15  Score=99.55  Aligned_cols=68  Identities=26%  Similarity=0.521  Sum_probs=51.3

Q ss_pred             HHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCC--CcccCCCCCCCccChhHHHHHHHhhcccc
Q psy10075        277 MKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN--QKYFCGSCNFSCTSNTDLLEHVQTNHIIV  345 (373)
Q Consensus       277 L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  345 (373)
                      |..|+ +.|+++++|.|.+|++.|.+...|..|++.+|.+  .+|.|++|++.|.....|..|++.+|+..
T Consensus         3 ~~~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCC-CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccc-cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            44577 7778888888888888888888888887645543  45888888888888888888888887543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.6e-14  Score=98.96  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=37.4

Q ss_pred             ccceeecCCCCcceecCCCCccccChhhHhhccccCCCC----CccccCcCcccccchHHHHHHhhhhhccCCccccCcc
Q psy10075         13 ECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ----KLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLC   88 (373)
Q Consensus        13 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   88 (373)
                      +..|++.|.+++||.|+.|++.|.+...|..|+..+...    ++|.|..|++.|.....|..| +..|.+++++.|..|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH-ADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHH-HHHCCCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHH-HHHccCCCCcccCCC
Confidence            344555555555555555555555555555554433332    345555555555555555555 244444444445444


Q ss_pred             cc
Q psy10075         89 DS   90 (373)
Q Consensus        89 ~~   90 (373)
                      +.
T Consensus        82 ~~   83 (86)
T 1x6h_A           82 GP   83 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=3.3e-14  Score=98.90  Aligned_cols=78  Identities=28%  Similarity=0.574  Sum_probs=63.3

Q ss_pred             ceec--CCCcccccChHHHhhhhhccCCCCCCCCeecCC--CCccccChhHHHHhhhhhccCCCCccCCC---Ccccccc
Q psy10075        230 EYHC--TYCDYICSSRTILKSHINKKHANDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSF---CEYKCTT  302 (373)
Q Consensus       230 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~~---C~~~f~~  302 (373)
                      ||.|  +.|++.|.+...|..|++.+ .  ++++|.|+.  |++.|.....|..|+ +.|.+   |.|..   |++.|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h-~--~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~---~~C~~~~~C~~~f~~   73 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSH-T--QQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---YPCKKDDSCSFVGKT   73 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH-H--TTCCEECCSTTCCCEESSHHHHHHHH-HHHHS---EECCSCSSCCCEESS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHh-C--CCCCeeCCCCCCcCccCCHHHHHHHH-HHhCC---CCCCCCCCCCCccCC
Confidence            5778  77888888888888887543 2  367889988  999999999999998 66666   88988   9999999


Q ss_pred             hhhhhhhhhhcc
Q psy10075        303 KFGLKSHVTRIH  314 (373)
Q Consensus       303 ~~~l~~H~~~~h  314 (373)
                      .+.|..|++.+|
T Consensus        74 ~~~l~~H~~~hh   85 (85)
T 2j7j_A           74 WTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhcC
Confidence            999999987664

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.9e-14  Score=102.98  Aligned_cols=74  Identities=20%  Similarity=0.210  Sum_probs=61.0

Q ss_pred             cccChhHHHHhhhhhccCCCCccCCCCccccc-chhhhhhhhhhccC-CCcccCCCCCCCccChhHHHHHHHhhccc
Q psy10075        270 KFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCT-TKFGLKSHVTRIHS-NQKYFCGSCNFSCTSNTDLLEHVQTNHII  344 (373)
Q Consensus       270 ~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  344 (373)
                      .+.....+..|+ +.|.++++|.|.+|++.|. +...|..|++.|++ +.+|.|.+|++.|.....|..|+++||+.
T Consensus         5 s~~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            5 SSGPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            455566777888 7888888888888888888 88888888887777 66788988998888888888888888754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=7.1e-14  Score=95.74  Aligned_cols=70  Identities=29%  Similarity=0.466  Sum_probs=44.5

Q ss_pred             CCcceecCC--CCccccChhhHhhccc-cCCCCCccccCc--CcccccchHHHHHHhhhhhccCCccccCcccccc
Q psy10075         22 DSYNFICIL--CNYHAENFENIYLHLP-SHFEQKLFSCDL--CEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTF   92 (373)
Q Consensus        22 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f   92 (373)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+ .+|.++++|.|+.|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCCCCCC
Confidence            455666665  6666666666666666 566666666666  666666666666663 456666666666666655

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=9.3e-14  Score=95.38  Aligned_cols=59  Identities=22%  Similarity=0.495  Sum_probs=44.8

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      +.++|.|++|++.|.....|..|+ +.|++++||.|.+|++.|.++..|..|+++.|.++
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHL-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHH-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhh-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            456788888888888888888887 67777788888888888888888888876666543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.1e-14  Score=93.23  Aligned_cols=61  Identities=21%  Similarity=0.356  Sum_probs=40.0

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhcc--CCCcccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH--SNQKYFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      +.|+++++|.|+.|++.|.+...|..|++.+|  ++.+|.|+.|++.|.+..+|..|++.+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45666666666666666666666666665533  34457777777777777777777776665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.44  E-value=1.1e-14  Score=110.17  Aligned_cols=81  Identities=17%  Similarity=0.277  Sum_probs=58.2

Q ss_pred             cceecCCCccccc------ChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccc
Q psy10075        229 AEYHCTYCDYICS------SRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTT  302 (373)
Q Consensus       229 ~~~~C~~C~~~f~------~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~  302 (373)
                      +++.|+.|+..|.      ....|..|+.    +.+++||.|++|++.|.....|..|+ +.|  ++||.|.+|++.|.+
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~~----h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H--~~~~~C~~C~k~f~~  112 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLLA----SKAISQFVCPLCLMPFSSSVSLKQHI-RYT--EHTKVCPVCKKEFTS  112 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHHH----HHHHCSEECTTTCCEESSHHHHHHHH-HHT--CCCCBCTTTCCBCSS
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHHH----hCCCCCeECCCCCcccCCHhHHHHHH-HHC--CCCCCCCCCCcccCC
Confidence            3455555544443      4556666652    22377888888888888888888888 666  778888888888888


Q ss_pred             hhhhhhhhhhccCC
Q psy10075        303 KFGLKSHVTRIHSN  316 (373)
Q Consensus       303 ~~~l~~H~~~~h~~  316 (373)
                      .+.|..|++.+|+.
T Consensus       113 ~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          113 TDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHCCc
Confidence            88888888777764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=8.5e-14  Score=99.18  Aligned_cols=72  Identities=21%  Similarity=0.494  Sum_probs=57.8

Q ss_pred             CccceecCCCcccccChHHHhhhhhccCCC-CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcc
Q psy10075        227 IEAEYHCTYCDYICSSRTILKSHINKKHAN-DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY  298 (373)
Q Consensus       227 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~  298 (373)
                      +++||.|+.|++.|.....|..|+...|.+ .+++||.|.+||+.|...+.|..|+.+.|++++||.|.++..
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            467888888888888888888887544433 457899999999999999999999328899999999987543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.5e-13  Score=93.53  Aligned_cols=68  Identities=15%  Similarity=0.239  Sum_probs=42.1

Q ss_pred             eecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCcccc
Q psy10075         17 VSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC   85 (373)
Q Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   85 (373)
                      ...+.++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.....|..| +.+|.++++|.|
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHH-GGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHH-HHHhCCCCCCCC
Confidence            34445566666666666666666666666666666666666666666666666666 355666666555

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.4e-13  Score=91.82  Aligned_cols=59  Identities=25%  Similarity=0.670  Sum_probs=34.7

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      ++++|.|++|++.|.....|..|+ +.|.++++|.|.+|++.|.+...|..|++.++++.
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHH-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            355666666666666666666666 44555556666666666655556666655555544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=1.6e-13  Score=92.63  Aligned_cols=62  Identities=29%  Similarity=0.677  Sum_probs=41.0

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcc
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKY  319 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  319 (373)
                      .++++|.|+.|++.|.....|..|+ +.|.++++|+|.+|++.|.+...|..|++.|+++.+|
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3456677777777777777777776 5666666677777777776666666666665555443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.8e-13  Score=91.19  Aligned_cols=63  Identities=25%  Similarity=0.516  Sum_probs=54.4

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhccccc
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVG  346 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  346 (373)
                      .|+++++|.|.+|++.|.+...|..|++.|+++.+|.|.+|++.|.....|..|+++||+...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            467888999999999999999999999887777889999999999999999999999876443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=1.5e-13  Score=94.29  Aligned_cols=61  Identities=23%  Similarity=0.457  Sum_probs=31.8

Q ss_pred             CCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHHHHHHhhhcCCC
Q psy10075         48 HFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTND  109 (373)
Q Consensus        48 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  109 (373)
                      +...++|.|++|++.|.+...|..| +.+|.+++||.|+.|++.|.....|..|++++|+++
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H-~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERH-LRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHH-HHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhh-hhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3344445555555555555555555 344555555555555555555555555554555443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.42  E-value=9.4e-14  Score=88.51  Aligned_cols=55  Identities=38%  Similarity=0.837  Sum_probs=32.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      +++|.|++|++.|.....|..|+ +.|.++++|.|++|++.|.+...|..|++.+|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHL-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHH-HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            45566666666666666666666 55666666666666666666666666665544

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2e-13  Score=91.53  Aligned_cols=58  Identities=24%  Similarity=0.441  Sum_probs=31.9

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      .|+++++|.|.+|++.|.+...|..|++.|+++.+|.|++|++.|.....|..|+++|
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            4455555555555555555555555555554455555555555555555555555555

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.40  E-value=1.4e-13  Score=87.71  Aligned_cols=57  Identities=23%  Similarity=0.522  Sum_probs=50.7

Q ss_pred             CCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        287 GLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      ++++|+|++|++.|.+...|..|++.|+++.+|.|++|++.|....+|..|++.||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467999999999999999999999999899999999999999999999999999973

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.8e-13  Score=92.14  Aligned_cols=66  Identities=18%  Similarity=0.315  Sum_probs=32.0

Q ss_pred             ccceeecCCCCcceecCCCCccccChhhHhhccc-cCCCC-CccccCcCcccccchHHHHHHhhhhhc
Q psy10075         13 ECAFVSRLDDSYNFICILCNYHAENFENIYLHLP-SHFEQ-KLFSCDLCEYQTNTKIYIRRHMLKIHL   78 (373)
Q Consensus        13 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~   78 (373)
                      +.+|++.|.+++||.|++|++.|.+...|..|+. .|.++ ++|.|+.|++.|.....|..|+...|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3445555555555555555555555555555543 34332 445555555555555555555433333

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3.4e-13  Score=95.58  Aligned_cols=71  Identities=15%  Similarity=0.229  Sum_probs=51.9

Q ss_pred             ccccChhHHHHhhhhhccCCCCccCCCCcccc-cchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHH-HHhh
Q psy10075        269 SKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKC-TTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEH-VQTN  341 (373)
Q Consensus       269 ~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H-~~~~  341 (373)
                      .+|.....|..|+ +.|.++++|.|..|++.| .+...|..|++.| ++.+|.|.+|++.|.....|..| +++|
T Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           14 PVYAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CSSCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            3556667777777 666677777777777777 7777777777666 66667777777777777777777 5554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=4.4e-13  Score=90.40  Aligned_cols=65  Identities=26%  Similarity=0.423  Sum_probs=58.3

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhccccccccc
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSS  350 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~  350 (373)
                      ..+.++++|+|..|++.|.+...|..|++.|.++.+|.|.+|++.|.....|..|+++|   .+++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H---~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH---SGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHH---CCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhc---CCCCCC
Confidence            45778899999999999999999999999888888999999999999999999999998   445553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.9e-13  Score=89.63  Aligned_cols=60  Identities=30%  Similarity=0.574  Sum_probs=53.2

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      .++++|.|++|++.|.....|..|+ +.|.++++|+|++|++.|.+...|..|++.|+++.
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4588999999999999999999999 78889999999999999999999999998776653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.36  E-value=6.1e-13  Score=84.68  Aligned_cols=55  Identities=27%  Similarity=0.684  Sum_probs=35.5

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  316 (373)
                      ||.|+.|++.|.....|..|+ +.|.++++|.|+.|++.|.+...|..|++.|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            466666666666666666666 5566666666666666666666666666555544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=4.4e-13  Score=88.19  Aligned_cols=58  Identities=24%  Similarity=0.542  Sum_probs=48.9

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhc-cCCCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAH-YGLKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +++||.|+.|++.|.....|..|++..| +++++|.|+.|++.|.+.+.|..|++.+|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4788899999999999999999985547 688889999999999888999999877775

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=9.6e-13  Score=84.71  Aligned_cols=55  Identities=35%  Similarity=0.718  Sum_probs=35.2

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +||.|+.|++.|.....|..|+ +.|+++++|.|++|++.|.+...|..|++..|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            3566666666666666666666 556666666666666666666666666544443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=7.5e-13  Score=90.28  Aligned_cols=56  Identities=23%  Similarity=0.475  Sum_probs=27.4

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccC---CCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG---LKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +++|.|.+|++.|.....|..|+ +.|.+   +++|.|.+|++.|.+...|..|++.+|.
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CcCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            45555555555555555555555 33332   4445555555555555555555433333

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.4e-13  Score=96.34  Aligned_cols=78  Identities=19%  Similarity=0.252  Sum_probs=62.4

Q ss_pred             ccChHHHhhhhhccCCCCCCCCeecCCCCcccc-ChhHHHHhhhhhccC-CCCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        240 CSSRTILKSHINKKHANDEDKPFTCEHCDSKFC-KKYDMKMHMSRAHYG-LKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       240 f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~-~~~~L~~H~~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      +.....+..|++ .|  .++++|.|++|++.|. ....|..|+ +.|.+ +++|.|.+|++.|.+...|..|++.|+++.
T Consensus         6 ~~~~~~~~~h~~-~h--~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            6 SGPGGPEEQWQR-AI--HERGEAVCPTCNVVTRKTLVGLKKHM-EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCSCSHHHH-TT--TTTSCCCCTTTCCCCSSCSHHHHHHH-HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCcHHHHHH-Hh--ccCCCcCCCCCCCChhhhHHHHHHHH-HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            334445566664 23  3478999999999999 999999999 66766 889999999999999999999998888887


Q ss_pred             cccC
Q psy10075        318 KYFC  321 (373)
Q Consensus       318 ~~~C  321 (373)
                      ++.-
T Consensus        82 p~~~   85 (98)
T 2gqj_A           82 PSDA   85 (98)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            7443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.8e-13  Score=89.56  Aligned_cols=53  Identities=30%  Similarity=0.780  Sum_probs=30.0

Q ss_pred             CCCeecC--CCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhh
Q psy10075        259 DKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTR  312 (373)
Q Consensus       259 ~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  312 (373)
                      +++|.|+  .|++.|.....|..|+ +.|.++++|.|++|++.|.+...|..|++.
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHH-HhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            5555554  3555555555555555 455555555555555555555555555543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.5e-12  Score=88.76  Aligned_cols=61  Identities=18%  Similarity=0.431  Sum_probs=49.5

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhccC---CCcccCCCCCCCccChhHHHHHHHhhcccc
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS---NQKYFCGSCNFSCTSNTDLLEHVQTNHIIV  345 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  345 (373)
                      |+++++|+|.+|++.|.+...|..|++.|++   +.+|.|.+|++.|.....|..|++.+|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            6778888888888888888888888877775   567888888888888888888887777543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.7e-12  Score=91.95  Aligned_cols=77  Identities=14%  Similarity=0.186  Sum_probs=56.0

Q ss_pred             ccccChhhHhhccccCCCCCccccCcCcccc-cchHHHHHHhhhhhccCCccccCccccccCCchHHHHHHhhhcCCCCC
Q psy10075         33 YHAENFENIYLHLPSHFEQKLFSCDLCEYQT-NTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTNDRP  111 (373)
Q Consensus        33 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  111 (373)
                      ..|.....|..|+..+.++++|.|+.|++.| .+...|..| +.+| ++++|.|..|++.|.....|..|+.++|+++..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H-~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKH-MENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHH-HHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHH-HHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            4556666777777777777778888888888 777788888 4566 777788888888888878888774466765433

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.30  E-value=1.8e-12  Score=82.40  Aligned_cols=54  Identities=24%  Similarity=0.522  Sum_probs=51.3

Q ss_pred             CccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      ||.|..|++.|.+...|..|++.|+++.+|.|++|++.|....+|..|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            689999999999999999999988888899999999999999999999999964

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.6e-13  Score=92.39  Aligned_cols=72  Identities=8%  Similarity=0.009  Sum_probs=56.4

Q ss_pred             hcccccceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCcc
Q psy10075          9 NHSRECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLC   88 (373)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   88 (373)
                      +.+.|..|++.|.+++||.|+.|++.|.+...|..       +++|.|+.|++.|.....|..| +.+|.++++|.|+.|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H-~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKD-EGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCC-SSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHH-HHhhcCCCCCCCCCC
Confidence            35678888888888888899999988888877755       5677888888888777777777 466777777777766

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.7e-12  Score=85.57  Aligned_cols=67  Identities=16%  Similarity=0.389  Sum_probs=57.4

Q ss_pred             hHHHHhhhhhccCCCCccCC--CCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        275 YDMKMHMSRAHYGLKPFKCS--FCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       275 ~~L~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ..|..|+...|+++++|.|+  .|++.|.+...|..|++.|.++.+|.|++|++.|.....|..|+++|
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            45667777789999999997  59999999999999998888888899999999999999999999876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.3e-13  Score=92.77  Aligned_cols=70  Identities=13%  Similarity=0.146  Sum_probs=54.9

Q ss_pred             HHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCC
Q psy10075        244 TILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGS  323 (373)
Q Consensus       244 ~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  323 (373)
                      ..|..|++ .  +.++++|.|++|++.|.....|..        +++|.|+.|++.|.+...|..|++.|+++.+|.|++
T Consensus         4 ~~l~~H~~-~--h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            4 GSSGKRQK-I--HLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CSCCCCCC-C--CCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             hhHHHHHH-H--hCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            45666764 2  234788888888888888877765        678888889888888888888888877777888887


Q ss_pred             C
Q psy10075        324 C  324 (373)
Q Consensus       324 C  324 (373)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=4.8e-12  Score=81.35  Aligned_cols=54  Identities=30%  Similarity=0.539  Sum_probs=50.1

Q ss_pred             CCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhc
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      +||.|..|++.|.+...|..|++.|+++.+|.|++|++.|.+...|..|++..|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            579999999999999999999998888889999999999999999999986555

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=4.8e-12  Score=89.85  Aligned_cols=64  Identities=16%  Similarity=0.216  Sum_probs=51.9

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCC--------ccCCCCcccccchhhhhhhhhhccCCCcccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKP--------FKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCG  322 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~  322 (373)
                      ...|.|+.|++.|.....|..|++..|.++++        |.|.+|++.|.+...|..|++.|.++.+|.|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            33467888999999999999998444888777        88888888888888888888887777888885

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.7e-11  Score=79.46  Aligned_cols=55  Identities=16%  Similarity=0.337  Sum_probs=39.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC-CCcccccchhhhhhhhhhccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS-FCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +++||.|+.|++.|. ...|..|+ +. ++++||.|+ .|++.|..++.|..|++.|-.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHH-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHH-HH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            366777777777777 77777777 44 677777777 777777777777777755443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=6.1e-11  Score=74.21  Aligned_cols=48  Identities=21%  Similarity=0.536  Sum_probs=39.4

Q ss_pred             CCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccc
Q psy10075        255 ANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTT  302 (373)
Q Consensus       255 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~  302 (373)
                      .+.+++||.|++|++.|.....|..|++..|+++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            345678888988999998888888888448888888888888888864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.09  E-value=9.8e-11  Score=82.96  Aligned_cols=62  Identities=26%  Similarity=0.344  Sum_probs=48.8

Q ss_pred             ceecCCCcccccChHHHhhhhhccCCCCCCCC--------eecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        230 EYHCTYCDYICSSRTILKSHINKKHANDEDKP--------FTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       230 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~--------~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      .+.|+.|++.|.+...|..|+...|..  +++        |.|++|++.|.....|..|+ +.|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~--~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVG--GPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTC--CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccC--CCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            356777777777777777776543433  333        89999999999999999999 889999999996

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.05  E-value=1.8e-10  Score=76.89  Aligned_cols=55  Identities=33%  Similarity=0.680  Sum_probs=45.5

Q ss_pred             CCCCCeecCC--CCccccChhHHHHhhhhhccCCCCccCCC--Ccccccchhhhhhhhhh
Q psy10075        257 DEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSF--CEYKCTTKFGLKSHVTR  312 (373)
Q Consensus       257 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~  312 (373)
                      ...++|.|+.  |++.|.....|..|+ +.|.++++|+|.+  |++.|.....|..|++.
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            3467888888  888888888888888 7788888888865  88888888888888754

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.05  E-value=1.4e-10  Score=69.85  Aligned_cols=45  Identities=16%  Similarity=0.014  Sum_probs=33.4

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.5e-11  Score=76.77  Aligned_cols=55  Identities=18%  Similarity=0.391  Sum_probs=50.8

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCC-CCCCCccChhHHHHHHHhh
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCG-SCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~-~C~~~f~~~~~l~~H~~~~  341 (373)
                      .-+.+||.|..|++.|. ...|..|++. .++.+|.|+ .|++.|.....|..|+++|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            34678999999999999 9999999987 777889999 9999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.3e-10  Score=69.96  Aligned_cols=45  Identities=13%  Similarity=-0.014  Sum_probs=32.6

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|++|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=69.76  Aligned_cols=45  Identities=16%  Similarity=0.020  Sum_probs=35.5

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777778888888888888888888888888887788888766

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=69.75  Aligned_cols=45  Identities=16%  Similarity=0.084  Sum_probs=34.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.4e-10  Score=69.90  Aligned_cols=45  Identities=13%  Similarity=-0.009  Sum_probs=33.7

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=69.99  Aligned_cols=45  Identities=13%  Similarity=0.087  Sum_probs=29.7

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=69.71  Aligned_cols=45  Identities=13%  Similarity=-0.009  Sum_probs=29.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=70.37  Aligned_cols=37  Identities=35%  Similarity=0.594  Sum_probs=21.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||+|++|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A           10 GKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            55566666666666666666665 55555555655554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.03  E-value=1.3e-10  Score=70.00  Aligned_cols=44  Identities=16%  Similarity=0.085  Sum_probs=26.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            55555555666666666666666666666666655556655554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=69.95  Aligned_cols=37  Identities=30%  Similarity=0.531  Sum_probs=22.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            55566666666666666666665 55555566666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.03  E-value=1.4e-10  Score=69.92  Aligned_cols=45  Identities=13%  Similarity=0.014  Sum_probs=30.4

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666666677777777777777777777666666666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=69.58  Aligned_cols=45  Identities=13%  Similarity=-0.004  Sum_probs=32.5

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.03  E-value=1.4e-10  Score=69.86  Aligned_cols=37  Identities=30%  Similarity=0.581  Sum_probs=21.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            55555555555555555555555 45555555555554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.03  E-value=1.3e-10  Score=70.06  Aligned_cols=37  Identities=32%  Similarity=0.649  Sum_probs=20.5

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||+|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A           10 EKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            45555555555555555555555 44555555555554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.03  E-value=1e-10  Score=70.53  Aligned_cols=38  Identities=34%  Similarity=0.609  Sum_probs=23.7

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||.|+.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             CCCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=69.62  Aligned_cols=37  Identities=32%  Similarity=0.688  Sum_probs=20.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||+|.+|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            55555555555555555555555 45555555555554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=69.78  Aligned_cols=37  Identities=35%  Similarity=0.618  Sum_probs=21.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|+++++|+|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A           10 EKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            55555555555555555555555 45555555555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.7e-10  Score=69.43  Aligned_cols=45  Identities=13%  Similarity=0.069  Sum_probs=33.2

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=70.02  Aligned_cols=38  Identities=32%  Similarity=0.624  Sum_probs=23.8

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.1e-10  Score=69.64  Aligned_cols=38  Identities=32%  Similarity=0.522  Sum_probs=23.3

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|+++++|.|.+|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            7 GEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCCCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCCC
T ss_pred             CCcCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            355666666666666666666666 55666666666655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.4e-10  Score=69.92  Aligned_cols=37  Identities=32%  Similarity=0.641  Sum_probs=20.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||+|++|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55555555555555555555555 45555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=69.56  Aligned_cols=45  Identities=11%  Similarity=-0.032  Sum_probs=29.2

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666666655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.8e-10  Score=69.40  Aligned_cols=45  Identities=13%  Similarity=0.039  Sum_probs=29.9

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666655

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=69.98  Aligned_cols=37  Identities=30%  Similarity=0.479  Sum_probs=21.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             CCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            55555555555555555555555 45555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.1e-10  Score=69.10  Aligned_cols=45  Identities=16%  Similarity=0.050  Sum_probs=31.9

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666777777777777777777777777777777777777665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=70.04  Aligned_cols=38  Identities=32%  Similarity=0.539  Sum_probs=24.1

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             CCCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.02  E-value=1.4e-10  Score=69.85  Aligned_cols=37  Identities=32%  Similarity=0.619  Sum_probs=22.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|...+.|..|+ +.|++++||+|++|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55566666666666666666665 55555566666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=1.4e-10  Score=69.85  Aligned_cols=38  Identities=26%  Similarity=0.524  Sum_probs=23.4

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             CCcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            355666666666666666666666 55666666666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=69.62  Aligned_cols=37  Identities=30%  Similarity=0.531  Sum_probs=21.4

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             CCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55555555555555555555555 45555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=69.56  Aligned_cols=37  Identities=32%  Similarity=0.566  Sum_probs=23.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|+++++|+|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666655

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.6e-10  Score=69.59  Aligned_cols=37  Identities=32%  Similarity=0.620  Sum_probs=20.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            45555555555555555555555 44555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=69.46  Aligned_cols=37  Identities=38%  Similarity=0.671  Sum_probs=21.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||+|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           10 EKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            55566666666666666666665 45555555655554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.5e-10  Score=69.67  Aligned_cols=44  Identities=14%  Similarity=-0.037  Sum_probs=28.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.7e-11  Score=70.57  Aligned_cols=37  Identities=30%  Similarity=0.469  Sum_probs=23.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|...+.|..|+ +.|++++||+|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             CcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.01  E-value=2.1e-10  Score=69.05  Aligned_cols=44  Identities=14%  Similarity=-0.020  Sum_probs=30.5

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56666666777777777777777777777777766677776665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=69.50  Aligned_cols=45  Identities=13%  Similarity=0.089  Sum_probs=29.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.6e-10  Score=69.63  Aligned_cols=37  Identities=27%  Similarity=0.565  Sum_probs=22.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|+++++|+|++|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            55566666666666666666665 55555566666554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.5e-10  Score=69.71  Aligned_cols=37  Identities=32%  Similarity=0.633  Sum_probs=22.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55666666666666666666665 55566666666554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=70.01  Aligned_cols=38  Identities=29%  Similarity=0.529  Sum_probs=24.7

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CCCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.7e-10  Score=69.53  Aligned_cols=37  Identities=35%  Similarity=0.593  Sum_probs=23.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||+|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A           10 EKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            56666666666666666666666 55666666666655

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=70.02  Aligned_cols=44  Identities=14%  Similarity=-0.034  Sum_probs=23.6

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.01  E-value=1.7e-10  Score=69.44  Aligned_cols=37  Identities=32%  Similarity=0.523  Sum_probs=23.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||+|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A           10 EKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.4e-10  Score=69.84  Aligned_cols=38  Identities=32%  Similarity=0.466  Sum_probs=24.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|...+.|..|+ +.|++++||+|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CCCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=69.93  Aligned_cols=38  Identities=32%  Similarity=0.621  Sum_probs=24.8

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            356666666666666666666666 56666666666665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=69.92  Aligned_cols=45  Identities=13%  Similarity=-0.022  Sum_probs=25.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            345555555555555555555555555555555555555555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=69.86  Aligned_cols=38  Identities=29%  Similarity=0.517  Sum_probs=24.9

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||+|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            366666666666666666666666 55666666666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=69.94  Aligned_cols=37  Identities=32%  Similarity=0.609  Sum_probs=23.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             CCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666655

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=69.52  Aligned_cols=37  Identities=35%  Similarity=0.644  Sum_probs=22.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|...+.|..|+ +.|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=69.99  Aligned_cols=38  Identities=34%  Similarity=0.693  Sum_probs=24.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.6e-10  Score=69.61  Aligned_cols=37  Identities=27%  Similarity=0.518  Sum_probs=22.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSCC
T ss_pred             CcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=70.05  Aligned_cols=37  Identities=27%  Similarity=0.573  Sum_probs=22.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLIKHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHH-HHHHCSSCSSSCCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.00  E-value=1.3e-10  Score=70.06  Aligned_cols=44  Identities=14%  Similarity=0.031  Sum_probs=21.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444444444444444444444444444444444444444443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2e-10  Score=69.14  Aligned_cols=45  Identities=16%  Similarity=0.042  Sum_probs=31.4

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666677777777777777777777777777777777777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=68.99  Aligned_cols=45  Identities=13%  Similarity=0.045  Sum_probs=33.8

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.8e-10  Score=69.34  Aligned_cols=45  Identities=13%  Similarity=0.037  Sum_probs=28.7

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666655

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=69.75  Aligned_cols=44  Identities=14%  Similarity=0.015  Sum_probs=24.9

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=69.95  Aligned_cols=38  Identities=21%  Similarity=0.520  Sum_probs=23.3

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|+++++|.|+.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            355666666666666666666666 55666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.8e-10  Score=69.34  Aligned_cols=45  Identities=20%  Similarity=0.098  Sum_probs=28.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355566666666666666666666666666666666666666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.7e-10  Score=69.49  Aligned_cols=44  Identities=14%  Similarity=0.008  Sum_probs=24.9

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=68.95  Aligned_cols=44  Identities=18%  Similarity=0.060  Sum_probs=29.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.8e-10  Score=71.12  Aligned_cols=48  Identities=19%  Similarity=0.189  Sum_probs=43.3

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhh-hccCCCcccCCCCCCCccC
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVT-RIHSNQKYFCGSCNFSCTS  330 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~C~~C~~~f~~  330 (373)
                      ..|+++++|.|.+|++.|.....|..|++ .|.++.+|.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            35788999999999999999999999997 6777788999999999986

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=69.82  Aligned_cols=38  Identities=32%  Similarity=0.573  Sum_probs=23.0

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             CCCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            355666666666666666666666 55566666666555

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=69.31  Aligned_cols=38  Identities=37%  Similarity=0.688  Sum_probs=23.8

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=68.86  Aligned_cols=44  Identities=16%  Similarity=0.047  Sum_probs=25.6

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555566666666666655566666555555555555554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=69.55  Aligned_cols=37  Identities=30%  Similarity=0.553  Sum_probs=21.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           10 EKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55555555555555555555555 45555555555554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=70.07  Aligned_cols=44  Identities=18%  Similarity=0.163  Sum_probs=21.9

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44444445555555555555555555555554544455554443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=69.86  Aligned_cols=44  Identities=25%  Similarity=0.211  Sum_probs=23.3

Q ss_pred             ccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCcc
Q psy10075         44 HLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLC   88 (373)
Q Consensus        44 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   88 (373)
                      |++.|.++++|.|+.|++.|.....|..| +.+|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHH-HHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHH-HHhcCCCCCCCCCCC
Confidence            44555555555555555555555555555 345555555555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=69.45  Aligned_cols=44  Identities=16%  Similarity=0.027  Sum_probs=21.3

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444444445555555555444445445444444444444443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=69.98  Aligned_cols=44  Identities=14%  Similarity=0.070  Sum_probs=22.9

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555444

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=69.32  Aligned_cols=38  Identities=34%  Similarity=0.537  Sum_probs=24.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|...+.|..|+ +.|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             CCCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.4e-10  Score=68.81  Aligned_cols=44  Identities=14%  Similarity=0.074  Sum_probs=27.6

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.99  E-value=1.5e-10  Score=69.70  Aligned_cols=44  Identities=16%  Similarity=0.077  Sum_probs=22.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444455555555555555555555555555555555555443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.6e-10  Score=68.83  Aligned_cols=44  Identities=18%  Similarity=0.126  Sum_probs=24.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555555544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=69.56  Aligned_cols=44  Identities=14%  Similarity=-0.000  Sum_probs=25.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=69.32  Aligned_cols=44  Identities=11%  Similarity=0.002  Sum_probs=24.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=69.39  Aligned_cols=38  Identities=29%  Similarity=0.614  Sum_probs=25.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||+|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             CCcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            366666766777776666666666 56666666666665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.5e-10  Score=69.72  Aligned_cols=44  Identities=14%  Similarity=-0.026  Sum_probs=25.5

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555666666655555555555555555555555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.99  E-value=2.7e-10  Score=68.54  Aligned_cols=45  Identities=13%  Similarity=0.056  Sum_probs=31.5

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      .|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666677777777777777777777777777777777777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=69.84  Aligned_cols=44  Identities=18%  Similarity=0.146  Sum_probs=24.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.8e-10  Score=68.48  Aligned_cols=45  Identities=16%  Similarity=0.115  Sum_probs=31.7

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466667777777777777777777777777777777777777653

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.99  E-value=2.6e-10  Score=76.15  Aligned_cols=59  Identities=19%  Similarity=0.350  Sum_probs=53.3

Q ss_pred             hhccCCCCccCCC--CcccccchhhhhhhhhhccCCCcccCCC--CCCCccChhHHHHHHHhh
Q psy10075        283 RAHYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHSNQKYFCGS--CNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       283 ~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~~  341 (373)
                      ..+...++|.|.+  |++.|.....|..|++.|.++.+|.|.+  |++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456778999999  9999999999999999888888999976  999999999999998764

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.2e-10  Score=68.98  Aligned_cols=38  Identities=37%  Similarity=0.595  Sum_probs=24.4

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.1e-10  Score=69.07  Aligned_cols=38  Identities=32%  Similarity=0.571  Sum_probs=25.4

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||+|+.|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             CCCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            366666666666666666666666 66666666666665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=69.51  Aligned_cols=38  Identities=32%  Similarity=0.720  Sum_probs=25.1

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            366666666666666666666666 56666666666665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.5e-10  Score=68.68  Aligned_cols=44  Identities=20%  Similarity=0.064  Sum_probs=28.7

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.97  E-value=3e-10  Score=68.38  Aligned_cols=38  Identities=29%  Similarity=0.517  Sum_probs=25.0

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            366666666666666666666666 56666666666665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.3e-10  Score=68.85  Aligned_cols=38  Identities=24%  Similarity=0.331  Sum_probs=24.4

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             CCCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666655

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=69.07  Aligned_cols=44  Identities=14%  Similarity=-0.004  Sum_probs=27.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.9e-10  Score=68.44  Aligned_cols=37  Identities=30%  Similarity=0.600  Sum_probs=22.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            55666666666666666666666 55666666666553

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.7e-10  Score=68.59  Aligned_cols=44  Identities=16%  Similarity=0.010  Sum_probs=25.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.7e-10  Score=68.28  Aligned_cols=39  Identities=28%  Similarity=0.443  Sum_probs=23.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      +++||.|++|++.|.....|..|++..|++++||+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            356666666666666666666666215666666666655

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=69.10  Aligned_cols=38  Identities=34%  Similarity=0.606  Sum_probs=25.1

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            366666666666666666666666 55666666666665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=68.69  Aligned_cols=38  Identities=29%  Similarity=0.569  Sum_probs=25.0

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|+++++|+|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCCCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            366666666666666666666666 55666666666665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.2e-10  Score=68.03  Aligned_cols=44  Identities=16%  Similarity=0.041  Sum_probs=24.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccc-cCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLP-SHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C   59 (373)
                      |++.|.+++||.|+.|++.|.....|..|++ .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4455555555555555555555555555555 5555555555544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=7.9e-10  Score=67.15  Aligned_cols=41  Identities=27%  Similarity=0.485  Sum_probs=33.6

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcc
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY  298 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~  298 (373)
                      .++++|.|++|++.|.....|..|+ +.|+++++|.|.+|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            4577888888888888888888888 7788888888888874

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3e-10  Score=68.34  Aligned_cols=44  Identities=16%  Similarity=0.118  Sum_probs=25.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.4e-10  Score=67.60  Aligned_cols=38  Identities=34%  Similarity=0.648  Sum_probs=23.7

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~~   46 (46)
T 2em2_A            9 GEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSSCC
T ss_pred             CCCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            356666666666666666666666 55666666666553

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.5e-10  Score=68.74  Aligned_cols=44  Identities=20%  Similarity=0.178  Sum_probs=25.4

Q ss_pred             ccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCcc
Q psy10075         44 HLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLC   88 (373)
Q Consensus        44 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   88 (373)
                      |++.|.++++|.|+.|++.|.....|..| +.+|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H-~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHH-HHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHH-HHHcCCCCCCCCCCC
Confidence            45555555566666666666666666666 345555556666554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.91  E-value=1.5e-10  Score=74.73  Aligned_cols=53  Identities=13%  Similarity=0.183  Sum_probs=35.7

Q ss_pred             ccceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHH
Q psy10075         13 ECAFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIY   68 (373)
Q Consensus        13 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   68 (373)
                      |..|++.|.+++||.|+.|++.|.....|.   ..|.++++|.|+.|++.|.....
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            556677777777777777777776666664   56666677777777777665443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.2e-10  Score=66.94  Aligned_cols=43  Identities=19%  Similarity=0.067  Sum_probs=25.7

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDL   58 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   58 (373)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4555555666666666666666666666666666556665554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=65.43  Aligned_cols=40  Identities=28%  Similarity=0.515  Sum_probs=29.2

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCc
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCE  297 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~  297 (373)
                      .+++||.|++|++.|.....|..|+ +.|+++++|.|++||
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCCC
Confidence            3467777777777777777777777 667777777777775

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=7.2e-10  Score=66.30  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=40.4

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCC
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCN  325 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~  325 (373)
                      ..|+++++|.|..|++.|..++.|..|++.|.++.+|.|++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4689999999999999999999999999998888899999996

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.88  E-value=1.2e-10  Score=75.16  Aligned_cols=49  Identities=18%  Similarity=0.377  Sum_probs=33.3

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhh
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSH  309 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  309 (373)
                      .+++||.|+.||+.|.....|.    +.|++++||+|++|++.|....++..+
T Consensus        10 ~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A           10 TNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             CCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCcccccc
Confidence            3467777777777777766664    467777777777777777766655443

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.2e-09  Score=65.61  Aligned_cols=44  Identities=14%  Similarity=0.042  Sum_probs=32.8

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      +++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            35567777777777777777777777777777777777777765

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=65.47  Aligned_cols=43  Identities=14%  Similarity=0.104  Sum_probs=31.1

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3666677777777777777777777777777777777777775

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.88  E-value=9.4e-10  Score=64.67  Aligned_cols=35  Identities=26%  Similarity=0.583  Sum_probs=21.5

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|...+.|..|+ +.|+++++|.|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2el5_A            8 ENPYECSECGKAFNRKDQLISHQ-RTHAGESGPSSG   42 (42)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-GGGCCCCSCCCC
T ss_pred             CCCccCCCcChhhCCHHHHHHHH-HhcCCCCCCCCC
Confidence            55666666666666666666666 556666666553

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.6e-09  Score=65.06  Aligned_cols=43  Identities=16%  Similarity=0.074  Sum_probs=31.8

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4666777777777777777777777777777777777777775

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=65.88  Aligned_cols=38  Identities=32%  Similarity=0.570  Sum_probs=26.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            466777777777777777777776 66667777777665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.3e-09  Score=65.54  Aligned_cols=42  Identities=14%  Similarity=0.023  Sum_probs=27.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            556666666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.4e-09  Score=65.40  Aligned_cols=43  Identities=19%  Similarity=0.176  Sum_probs=29.3

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566666666777777777777777777777777666666665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=63.76  Aligned_cols=42  Identities=12%  Similarity=0.109  Sum_probs=31.1

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            366677777777777777777777777777777777777765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.4e-09  Score=66.08  Aligned_cols=43  Identities=16%  Similarity=0.254  Sum_probs=40.1

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCC
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNF  326 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~  326 (373)
                      .|.++++|.|.+|++.|.+...|..|++.|.++.+|.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            5778899999999999999999999999888888999999985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.6e-09  Score=65.10  Aligned_cols=43  Identities=16%  Similarity=0.051  Sum_probs=32.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4666777777777777777777777777777777777777775

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.86  E-value=9.8e-10  Score=66.05  Aligned_cols=43  Identities=16%  Similarity=0.053  Sum_probs=27.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3555666666666666666666666666666666666666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.2e-09  Score=64.13  Aligned_cols=34  Identities=21%  Similarity=0.508  Sum_probs=20.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++||.|++|++.|...+.|..|+ +.|+++++|+|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   41 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSS   41 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            55566666666666666666665 45555555555

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.3e-09  Score=65.48  Aligned_cols=42  Identities=14%  Similarity=0.050  Sum_probs=23.8

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.3e-09  Score=65.47  Aligned_cols=35  Identities=31%  Similarity=0.616  Sum_probs=20.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|+.|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCC
Confidence            55555555555555555555555 555555555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=65.44  Aligned_cols=35  Identities=31%  Similarity=0.702  Sum_probs=20.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||+|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPS   44 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSC
T ss_pred             CCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55555555555555555555555 455555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.85  E-value=1.5e-09  Score=63.76  Aligned_cols=41  Identities=15%  Similarity=0.104  Sum_probs=26.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      |++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45556666666666666666666666666666666666665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=65.35  Aligned_cols=35  Identities=29%  Similarity=0.581  Sum_probs=19.4

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eon_A           10 EKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTS
T ss_pred             CcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCC
Confidence            45555555555555555555555 455555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-09  Score=65.02  Aligned_cols=43  Identities=16%  Similarity=0.081  Sum_probs=26.3

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3555566666666666666666666666666666666666654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.5e-09  Score=65.17  Aligned_cols=43  Identities=19%  Similarity=0.155  Sum_probs=30.7

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566677777777777777777777777777777777777665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=65.50  Aligned_cols=43  Identities=12%  Similarity=0.028  Sum_probs=24.3

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3455555555555555555555555555555555555555554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.5e-09  Score=65.21  Aligned_cols=43  Identities=16%  Similarity=0.084  Sum_probs=27.9

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3556666666666666666666666666666666666666664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.5e-09  Score=65.15  Aligned_cols=35  Identities=34%  Similarity=0.684  Sum_probs=19.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            45555555555555555555555 445555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-09  Score=65.57  Aligned_cols=35  Identities=34%  Similarity=0.686  Sum_probs=21.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSC
T ss_pred             CCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55666666666666666666666 556666666654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-09  Score=65.01  Aligned_cols=43  Identities=14%  Similarity=0.070  Sum_probs=29.7

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4566666677777777777777777777777777666676665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=65.12  Aligned_cols=43  Identities=14%  Similarity=0.070  Sum_probs=27.4

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3556666666666666666666666666666666666666664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-09  Score=65.64  Aligned_cols=38  Identities=29%  Similarity=0.544  Sum_probs=23.3

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|++|++.|.....|..|+ +.|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            355666666666666666666666 55666666666655

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.85  E-value=1.2e-09  Score=65.72  Aligned_cols=36  Identities=36%  Similarity=0.667  Sum_probs=22.8

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emj_A            9 GEKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            356666666666666666666666 556666666665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=65.09  Aligned_cols=35  Identities=37%  Similarity=0.753  Sum_probs=20.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|+.|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPS   44 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSS
T ss_pred             CCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55555555555555555555555 455555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=65.25  Aligned_cols=35  Identities=34%  Similarity=0.681  Sum_probs=20.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|+++++|+|+
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCC
Confidence            55566666666666666666665 455555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=65.20  Aligned_cols=35  Identities=31%  Similarity=0.628  Sum_probs=19.6

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTT
T ss_pred             CcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCC
Confidence            55555555555555555555555 555555555554

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.8e-09  Score=64.90  Aligned_cols=42  Identities=12%  Similarity=0.080  Sum_probs=29.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.+++||.|++|++.|.+...|..|++.|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            556666667777777777777777777777777666677665

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=65.61  Aligned_cols=35  Identities=34%  Similarity=0.704  Sum_probs=21.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSC
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55666666666666666666666 556666666654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=65.61  Aligned_cols=36  Identities=33%  Similarity=0.610  Sum_probs=22.2

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||+|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGPS   44 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHH-HHHSSSSCCCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            355666666666666666666666 556666666664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=65.26  Aligned_cols=42  Identities=14%  Similarity=0.014  Sum_probs=24.4

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            455555555566666666665555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.9e-09  Score=64.72  Aligned_cols=35  Identities=40%  Similarity=0.794  Sum_probs=19.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++||.|+.|++.|.....|..|+ +.|++++||+|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            55555555555555555555555 455555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.3e-09  Score=65.52  Aligned_cols=43  Identities=14%  Similarity=0.104  Sum_probs=26.4

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            3555566666666666666666666666666666666666654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.3e-09  Score=65.56  Aligned_cols=43  Identities=14%  Similarity=0.111  Sum_probs=25.3

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3555555556666666666666666666666666555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=64.40  Aligned_cols=43  Identities=16%  Similarity=0.088  Sum_probs=29.4

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566666677777777777777777777777777666666663

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.8e-09  Score=64.81  Aligned_cols=43  Identities=14%  Similarity=0.040  Sum_probs=32.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4667777777777777777777777777777777777777775

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.2e-09  Score=64.51  Aligned_cols=43  Identities=16%  Similarity=0.036  Sum_probs=31.8

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCC-CCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFE-QKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            366677777777777777777777777777777777 7777775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-09  Score=65.16  Aligned_cols=35  Identities=37%  Similarity=0.740  Sum_probs=21.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            55666666666666666666665 555566666554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=65.45  Aligned_cols=36  Identities=31%  Similarity=0.662  Sum_probs=22.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eow_A            9 GEKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTT
T ss_pred             CCCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCC
Confidence            356666666666666666666666 556666666665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=64.97  Aligned_cols=36  Identities=36%  Similarity=0.694  Sum_probs=22.3

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++++|.|+.|++.|.....|..|+ +.|++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~   44 (46)
T 2yts_A            9 GEKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCC
T ss_pred             CCcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCC
Confidence            356666666666666666666666 556666666664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.5e-09  Score=63.54  Aligned_cols=43  Identities=14%  Similarity=0.086  Sum_probs=29.8

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3566666777777777777777777777777777777777663

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-09  Score=65.19  Aligned_cols=35  Identities=40%  Similarity=0.761  Sum_probs=21.6

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|+.|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCC
T ss_pred             CCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55666666666666666666666 556666666654

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.6e-09  Score=65.04  Aligned_cols=35  Identities=31%  Similarity=0.634  Sum_probs=19.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|+.|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCC
T ss_pred             CCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55555555555555555555555 455555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2e-09  Score=64.65  Aligned_cols=35  Identities=31%  Similarity=0.645  Sum_probs=21.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTT
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            55566666666666666666665 555666666554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=65.31  Aligned_cols=35  Identities=37%  Similarity=0.733  Sum_probs=21.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C~   44 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHH-HHHHSCCCSSST
T ss_pred             CcCccCCCCCCCcCCHHHHHHHH-HhcCCCCCCCCC
Confidence            55566666666666666666665 555555666554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.8e-09  Score=64.13  Aligned_cols=42  Identities=14%  Similarity=0.121  Sum_probs=26.2

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            355566666666666666666666666666666666666655

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.5e-09  Score=65.23  Aligned_cols=42  Identities=19%  Similarity=0.135  Sum_probs=25.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555566666666666666666666666666655666554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.8e-09  Score=64.16  Aligned_cols=42  Identities=17%  Similarity=0.126  Sum_probs=26.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      .|++.|.+++||.|+.|++.|.+...|..|+..|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            355556666666666666666666666666666666666655

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=63.50  Aligned_cols=40  Identities=15%  Similarity=0.125  Sum_probs=21.2

Q ss_pred             eecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         17 VSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      ++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4445555555555555555555555555555555555544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.1e-09  Score=63.11  Aligned_cols=34  Identities=32%  Similarity=0.778  Sum_probs=17.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++||.|++|++.|.....|..|+ +.|++++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            44555555555555555555555 44455555444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=65.07  Aligned_cols=43  Identities=14%  Similarity=0.104  Sum_probs=26.0

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3555566666666666666666666666666666666666554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.9e-09  Score=64.72  Aligned_cols=35  Identities=34%  Similarity=0.643  Sum_probs=20.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCC
T ss_pred             CCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            55555555555555555555555 555555555554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.81  E-value=8.3e-10  Score=68.94  Aligned_cols=46  Identities=13%  Similarity=0.140  Sum_probs=20.6

Q ss_pred             cccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCC
Q psy10075        270 KFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       270 ~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  316 (373)
                      .|.....|..|+ +.|+++++|.|..|++.|...+.|..|++.|.++
T Consensus         5 ~~~~~~~l~~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            5 RAKHPPGTEKPR-SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCSCSSCCCCCH-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             ccCCCcchhhHH-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            344444444444 4444444444444444444444444444443333

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.1e-09  Score=63.83  Aligned_cols=42  Identities=17%  Similarity=0.089  Sum_probs=26.9

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      .|++.|.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            355566666666666666666666666666666666666655

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.3e-09  Score=64.37  Aligned_cols=42  Identities=21%  Similarity=0.293  Sum_probs=39.2

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCC
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSC  324 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C  324 (373)
                      +.|+++++|.|.+|++.|.+...|..|++.|.++.+|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678999999999999999999999999999888899999987

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=63.81  Aligned_cols=34  Identities=29%  Similarity=0.560  Sum_probs=18.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      +++|.|++|++.|.....|..|+ +.|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCC
Confidence            45555555555555555555555 45555555555

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=65.24  Aligned_cols=35  Identities=26%  Similarity=0.520  Sum_probs=20.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++||.|++|++.|.....|..|+ +.|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLNQHL-RVHTQETLSGPS   44 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHH-HHHSSCCSSSCC
T ss_pred             CCCeECcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55566666666666666666665 555555666554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.6e-09  Score=64.33  Aligned_cols=36  Identities=25%  Similarity=0.518  Sum_probs=22.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++||.|++|++.|.....|..|+ +.|+++++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSSSSCEESSSHHHHHHH-HHCCCCCSSCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHh-HhcCCCCCCCCC
Confidence            356666666666666666666666 556666666653

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.1e-09  Score=64.52  Aligned_cols=36  Identities=28%  Similarity=0.490  Sum_probs=22.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccC-CCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYG-LKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~  294 (373)
                      +++||.|++|++.|.....|..|+ +.|++ ++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~   45 (46)
T 2eoy_A            9 KEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSS   45 (46)
T ss_dssp             CSCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSC
T ss_pred             CCCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            356666666666666666666666 55666 6666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=64.95  Aligned_cols=42  Identities=17%  Similarity=0.137  Sum_probs=25.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555555566666666666666666666666666555566554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=65.20  Aligned_cols=42  Identities=14%  Similarity=-0.003  Sum_probs=23.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.4e-09  Score=62.87  Aligned_cols=34  Identities=35%  Similarity=0.752  Sum_probs=18.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++||.|++|++.|...+.|..|+ +.|++++||+|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            45555555555555555555555 45555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=64.26  Aligned_cols=34  Identities=24%  Similarity=0.570  Sum_probs=20.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++||.|++|++.|.....|..|+ +.|+++++|+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQ-KTHSGQSGPSS   43 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHH-TTSSSSCSCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHH-HHcCCCCCCCC
Confidence            55566666666666666666665 55555555555

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=64.89  Aligned_cols=42  Identities=17%  Similarity=0.071  Sum_probs=21.6

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455555555555555555555555555555555555543

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.5e-09  Score=63.55  Aligned_cols=42  Identities=14%  Similarity=0.092  Sum_probs=30.2

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556667777777777777777777777777777777777765

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=63.77  Aligned_cols=35  Identities=29%  Similarity=0.643  Sum_probs=21.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eof_A            9 GEKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSS   43 (44)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCC
T ss_pred             CCCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCC
Confidence            355666666666666666666666 55666666655

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3e-09  Score=62.45  Aligned_cols=41  Identities=15%  Similarity=0.189  Sum_probs=27.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            55566666666666666666666666666666666666655

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.6e-09  Score=64.14  Aligned_cols=36  Identities=28%  Similarity=0.555  Sum_probs=22.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++||.|++|++.|.....|..|+ +.|+++++|+|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eoh_A            9 GKKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPS   44 (46)
T ss_dssp             CSCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTT
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            356666666666666666666666 556666666664

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.4e-09  Score=64.28  Aligned_cols=42  Identities=12%  Similarity=0.056  Sum_probs=23.7

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.3e-09  Score=63.69  Aligned_cols=35  Identities=34%  Similarity=0.703  Sum_probs=20.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||+|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPS   44 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCC
T ss_pred             CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55555555555555555555555 455555555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=65.00  Aligned_cols=36  Identities=28%  Similarity=0.649  Sum_probs=22.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++||.|++|++.|.....|..|+ +.|+++++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yto_A            9 GEKPYKCSDCGKAFTRKSGLHIHQ-QSHTGERHSGPS   44 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHH-HHHTCCCBTTTB
T ss_pred             CCCCEECcccCCccCCHhHHHHHH-HHcCCCCCCCCC
Confidence            356666666666666666666666 556666666664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.4e-09  Score=63.58  Aligned_cols=42  Identities=19%  Similarity=0.100  Sum_probs=30.8

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      +|++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            466677777777777777777777777777777777777766

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3e-09  Score=63.14  Aligned_cols=35  Identities=17%  Similarity=0.401  Sum_probs=22.2

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++++|.|+.|++.|.....|..|+ +.|++++||+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2emb_A            9 TRKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSS   43 (44)
T ss_dssp             CCSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCC
Confidence            356666666666666666666666 55666666665

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.2e-09  Score=63.00  Aligned_cols=41  Identities=12%  Similarity=0.092  Sum_probs=26.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45566666666666666666666666666666666666655

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.2e-09  Score=64.44  Aligned_cols=35  Identities=29%  Similarity=0.598  Sum_probs=18.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emz_A           10 ERPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGPS   44 (46)
T ss_dssp             CCSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            45555555555555555555555 445555555554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.77  E-value=3.4e-09  Score=62.20  Aligned_cols=41  Identities=12%  Similarity=0.083  Sum_probs=27.0

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      |++.|.+++||.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45566666666666666666666666666666666666655

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.8e-09  Score=63.99  Aligned_cols=35  Identities=31%  Similarity=0.673  Sum_probs=21.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      +++|.|++|++.|.....|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSC
T ss_pred             CCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55666666666666666666666 555666666554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.6e-09  Score=62.74  Aligned_cols=35  Identities=29%  Similarity=0.694  Sum_probs=21.9

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      +++||.|+.|++.|.....|..|+ +.|++++||.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCETCGARFVQVAHLRAHV-LIHTGSGPSSG   42 (42)
T ss_dssp             SSCSEECTTTCCEESSHHHHHHHT-HHHHSCCSSCC
T ss_pred             CCCCEeCCCcChhhCCHHHHHHHH-HHcCCCCCCCC
Confidence            356666666666666666666666 55666666655

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.75  E-value=3.5e-09  Score=62.13  Aligned_cols=35  Identities=20%  Similarity=0.521  Sum_probs=23.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      +++||.|++|++.|...+.|..|+ +.|++++||+|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHH-HHTTCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHh-hhcCCCCCCCC
Confidence            366667777777776666777776 66666666665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=63.21  Aligned_cols=35  Identities=17%  Similarity=0.506  Sum_probs=21.7

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||.|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eox_A            9 DSKSYNCNECGKAFTRIFHLTRHQ-KIHTRKSGPSS   43 (44)
T ss_dssp             CCCCEEETTTTEEESSSHHHHTTH-HHHCCCCCCSC
T ss_pred             CCCCeECcccCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            355666666666666666666666 55666666655

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.5e-09  Score=64.17  Aligned_cols=41  Identities=20%  Similarity=0.125  Sum_probs=19.9

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      |++.|.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444445555555544444444444444444444444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=9e-09  Score=62.32  Aligned_cols=44  Identities=18%  Similarity=0.105  Sum_probs=32.2

Q ss_pred             eeecCCCCcceecC--CCCccccChhhHhhccccCCCCCccccCcC
Q psy10075         16 FVSRLDDSYNFICI--LCNYHAENFENIYLHLPSHFEQKLFSCDLC   59 (373)
Q Consensus        16 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   59 (373)
                      |.+.|.+++||.|.  .|++.|.....|..|++.|.++++|.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566777777776  677777777777777777777777777765

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.1e-09  Score=64.52  Aligned_cols=42  Identities=21%  Similarity=0.352  Sum_probs=24.2

Q ss_pred             ccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccC
Q psy10075         44 HLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECS   86 (373)
Q Consensus        44 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   86 (373)
                      |++.|.++++|.|+.|++.|.....|..| +.+|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H-~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHH-HHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHH-HHHhCCCCCCCCC
Confidence            55555555566666666666666666666 3455555555554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=63.90  Aligned_cols=35  Identities=31%  Similarity=0.622  Sum_probs=20.4

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++||.|++|++.|.....|..|+ +.|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHL-RSHERTDPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHH-HHHHHSCCSSCS
T ss_pred             CCCeeCcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            55566666666666666666665 555555555554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.8e-09  Score=61.08  Aligned_cols=42  Identities=14%  Similarity=-0.027  Sum_probs=26.3

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      +|++.|.+++||.|++|++.|.....|..|++.|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            355566666666666666666666666666666666666654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6e-09  Score=61.83  Aligned_cols=35  Identities=17%  Similarity=0.240  Sum_probs=22.3

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (44)
T 2eou_A            9 AKTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSS   43 (44)
T ss_dssp             SSCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCC
Confidence            356666666666666666666666 55666666665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=9.2e-09  Score=60.65  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=24.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++++|.|+.|++.|.....|..|+ +.|++++||.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   42 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSS   42 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCC
Confidence            366677777777777777777776 666666677665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7.6e-09  Score=61.37  Aligned_cols=34  Identities=29%  Similarity=0.599  Sum_probs=20.7

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      ++||.|++|++.|...+.|..|+ +.|++++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~~   43 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPSS   43 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHH-hHhcCCCCCCC
Confidence            55666666666666666666666 55666666554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=1.5e-08  Score=59.71  Aligned_cols=41  Identities=22%  Similarity=0.385  Sum_probs=36.7

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCC
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGS  323 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  323 (373)
                      +.|+++++|.|..|++.|...+.|..|++.|.++.+|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46888999999999999999999999998888888899974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=5e-09  Score=62.17  Aligned_cols=41  Identities=12%  Similarity=0.130  Sum_probs=19.8

Q ss_pred             ccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCcccc
Q psy10075         44 HLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLEC   85 (373)
Q Consensus        44 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   85 (373)
                      |+..|.++++|.|+.|++.|.....|..| +.+|.++++|.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEH-QALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHH-HHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHH-HHHHCCCCCCCC
Confidence            34444444455555555555555555555 244444444444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.1e-08  Score=61.06  Aligned_cols=42  Identities=19%  Similarity=0.105  Sum_probs=31.1

Q ss_pred             eeecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         16 FVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        16 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      +...|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            345666777777777777777777777777777777777775

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=9.1e-09  Score=62.30  Aligned_cols=38  Identities=34%  Similarity=0.668  Sum_probs=27.0

Q ss_pred             CCCCeecC--CCCccccChhHHHHhhhhhccCCCCccCCCC
Q psy10075        258 EDKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLKPFKCSFC  296 (373)
Q Consensus       258 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C  296 (373)
                      ++++|.|.  .|++.|.....|..|+ +.|++++||+|.+|
T Consensus         9 ~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            46677776  6777777777777777 66777777777765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.2e-08  Score=61.15  Aligned_cols=36  Identities=28%  Similarity=0.470  Sum_probs=23.3

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      ++++|.|++|++.|.....|..|+ +.|++++||+|.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCC
T ss_pred             CCCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCC
Confidence            356666666666666666666666 556666666664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.8e-09  Score=72.33  Aligned_cols=61  Identities=21%  Similarity=0.388  Sum_probs=29.2

Q ss_pred             HHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        277 MKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       277 L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |..|+ ..|.+.+++.|.+|+..| ....|..|+ .+-+..+|.|+.|++.|. ...|..|++++
T Consensus         5 L~~H~-~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A            5 SSGHE-ETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CSCCC-CCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHB
T ss_pred             HHhhC-cccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHc
Confidence            33444 444445555555555554 244555554 444444455555555444 24455555444

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=2.2e-08  Score=58.25  Aligned_cols=35  Identities=26%  Similarity=0.585  Sum_probs=25.0

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      +++||.|++|++.|.....|..|+ +.|++++||+|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            466777777777777777777777 66777777765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.67  E-value=1e-08  Score=63.82  Aligned_cols=51  Identities=16%  Similarity=0.182  Sum_probs=45.0

Q ss_pred             cccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhccccccccc
Q psy10075        297 EYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHIIVGESSS  350 (373)
Q Consensus       297 ~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~  350 (373)
                      ++.|.....|..|++.|.++.+|.|.+|++.|....+|..|+++|   .+++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H---~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELR---HFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHH---TTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHh---ccCCCC
Confidence            357888999999998888888999999999999999999999998   455554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.8e-09  Score=61.41  Aligned_cols=37  Identities=38%  Similarity=0.633  Sum_probs=26.0

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCC
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCS  294 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  294 (373)
                      .++++|.|++|++.|.....|..|+ +.|+++++|.|+
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CCCcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            3466777777777777777777777 667777777765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=9.9e-09  Score=61.52  Aligned_cols=41  Identities=17%  Similarity=0.036  Sum_probs=21.0

Q ss_pred             eecCCCCcceecCCCCccccChhhHhhccccCCCCCccccC
Q psy10075         17 VSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCD   57 (373)
Q Consensus        17 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   57 (373)
                      ++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            33444555555555555555555555555555555555543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.1e-08  Score=58.39  Aligned_cols=39  Identities=18%  Similarity=0.112  Sum_probs=28.9

Q ss_pred             ecCCCCcceecCCCCccccChhhHhhccccCCCCCcccc
Q psy10075         18 SRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSC   56 (373)
Q Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   56 (373)
                      +.|.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            346667777777777777777777777777777777766

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=3.7e-08  Score=62.70  Aligned_cols=40  Identities=20%  Similarity=0.394  Sum_probs=34.1

Q ss_pred             CCCCCCeecCC--CCccccChhHHHHhhhhhccCCCCccCCC
Q psy10075        256 NDEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSF  295 (373)
Q Consensus       256 ~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  295 (373)
                      ..+++||.|+.  |+++|...+.|..|++++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            45689999965  99999999999999867899999998864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=6.7e-09  Score=69.50  Aligned_cols=64  Identities=19%  Similarity=0.258  Sum_probs=32.1

Q ss_pred             hHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCchHHHHHHhhhcCC
Q psy10075         40 NIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNMDLKKHIQRKHTN  108 (373)
Q Consensus        40 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  108 (373)
                      .|..|+..+.+.+++.|..|++.|. ...|..| . .|.+++++.|+.|++.|. ...|..|+ .+|++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H-~-~~c~~~~~~C~~C~~~~~-~~~l~~H~-~~c~~   67 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEH-E-DYCGARTELCGNCGRNVL-VKDLKTHP-EVCGR   67 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHH-H-HHHHHCEEECSSSCCEEE-TTGGGTHH-HHBTT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHH-H-hHcCCCceEcccCCCcCc-HHHHHHHH-HHccC
Confidence            3445555555555555555555552 4555555 2 444555555555555544 35555552 34443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=1.4e-08  Score=70.11  Aligned_cols=55  Identities=20%  Similarity=0.311  Sum_probs=43.1

Q ss_pred             CCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        256 NDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       256 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +.+++||.|++|++.|.....|..|+ +.|++++||+|..|.    ....|..|.+.+.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            34588999999999999999999999 788888999997664    45667777655444

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.45  E-value=1.6e-07  Score=53.80  Aligned_cols=35  Identities=20%  Similarity=0.384  Sum_probs=26.6

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC  293 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  293 (373)
                      +++||.|++|++.|...+.|..|+ +.|+++++|.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHM-NVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHH-HTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHH-HHcCCCcccee
Confidence            367788888888888888888887 67777777754

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.42  E-value=1.3e-07  Score=54.25  Aligned_cols=37  Identities=16%  Similarity=0.428  Sum_probs=27.4

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhccCCCcccC
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFC  321 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C  321 (373)
                      |+++++|.|.+|++.|.+.+.|..|++.|.++.+|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567788888888888888888888877776666655

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.40  E-value=2e-07  Score=51.11  Aligned_cols=32  Identities=22%  Similarity=0.471  Sum_probs=25.2

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCCCCcc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFK  292 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~  292 (373)
                      +||.|++|++.|...+.|..|+ +.|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCCCCCCC
Confidence            4678888888888888888888 7788877764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.39  E-value=1.5e-07  Score=53.12  Aligned_cols=26  Identities=31%  Similarity=0.599  Sum_probs=10.7

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhh
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~  310 (373)
                      |++++||+|+.|++.|.....|..|+
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~   31 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHR   31 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHH
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHH
Confidence            33444444444444444444444443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=7.8e-09  Score=71.40  Aligned_cols=57  Identities=14%  Similarity=0.180  Sum_probs=47.5

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      ..|+++++|.|..|++.|.....|..|++.|.++.+|+|..|...    ..|..|++.+.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~----~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR----KQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC----CCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH----HHHHhhhccccc
Confidence            568999999999999999999999999988888888999877644    445566666644

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.31  E-value=3.1e-07  Score=51.06  Aligned_cols=30  Identities=23%  Similarity=0.543  Sum_probs=16.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK  289 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  289 (373)
                      +++|.|+.|++.|...+.|..|+ +.|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~k   34 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHI-REVHGAA   34 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HHTSCTT
T ss_pred             CCCeECCCCcchhCCHHHHHHHH-HHHcCCC
Confidence            55556666666666555666665 4454443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.31  E-value=4.7e-07  Score=51.02  Aligned_cols=35  Identities=14%  Similarity=0.291  Sum_probs=31.4

Q ss_pred             hhhhccCCCcccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        309 HVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       309 H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      |++.|.++.+|.|+.|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            67777888889999999999999999999999853

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.1e-07  Score=52.54  Aligned_cols=29  Identities=17%  Similarity=0.540  Sum_probs=15.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ++||.|+.|++.|.....|..|+ +.|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~   35 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHI-KTNHPE   35 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHH-HHHCSS
T ss_pred             CCCcCCCCCCCccCCHHHHHHHH-HHHcCC
Confidence            45555555555555555555555 444443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.28  E-value=9e-07  Score=49.09  Aligned_cols=31  Identities=29%  Similarity=0.594  Sum_probs=20.2

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLK  289 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  289 (373)
                      +++||.|..|++.|...+.|..|+ +.|++++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~   34 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHL-KVHTDTL   34 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHH-GGGTSCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHH-HHcCCCC
Confidence            356677777777777777777776 5565554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.27  E-value=4.9e-07  Score=50.23  Aligned_cols=32  Identities=28%  Similarity=0.464  Sum_probs=20.1

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhccCC
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  316 (373)
                      |+++++|.|..|++.|...+.|..|++.|.++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            55666666666666666666666666555443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.27  E-value=8.7e-07  Score=49.11  Aligned_cols=34  Identities=24%  Similarity=0.561  Sum_probs=27.8

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      .|+++++|.|..|++.|...+.|..|++.|+++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3678888999999999998999999987776654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.26  E-value=3.8e-07  Score=50.72  Aligned_cols=24  Identities=21%  Similarity=0.495  Sum_probs=16.2

Q ss_pred             CCCCeecCCCCccccChhHHHHhh
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      +++||.|+.|+++|...+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            466666666666666666666665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=3.7e-07  Score=51.45  Aligned_cols=33  Identities=12%  Similarity=0.239  Sum_probs=16.6

Q ss_pred             cCCCCcceecCCCCccccChhhHhhccccCCCC
Q psy10075         19 RLDDSYNFICILCNYHAENFENIYLHLPSHFEQ   51 (373)
Q Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   51 (373)
                      .|.+++||.|+.|++.|.....|..|+..|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            344445555555555555555555555544443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=1.2e-06  Score=49.51  Aligned_cols=31  Identities=26%  Similarity=0.582  Sum_probs=21.6

Q ss_pred             CCCCCeecCC--CCccccChhHHHHhhhhhccCC
Q psy10075        257 DEDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       257 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      .+++||.|+.  |+++|...+.|..|+ +.|+++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg~   37 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHL-KVHTAL   37 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHH-HHHSCC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            3467777765  777777777777777 666654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=1e-06  Score=56.14  Aligned_cols=37  Identities=27%  Similarity=0.387  Sum_probs=19.2

Q ss_pred             cCCccccCc--cccccCCchHHHHHHhhhcCCCCCcccC
Q psy10075         79 RQRNLECSL--CDSTFSDNMDLKKHIQRKHTNDRPFSCN  115 (373)
Q Consensus        79 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~  115 (373)
                      +++||.|..  |++.|.....|..|++++|++++|+.|.
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            445555543  5555555555555544455555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.19  E-value=4.6e-07  Score=50.40  Aligned_cols=32  Identities=22%  Similarity=0.489  Sum_probs=27.4

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCC
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGS  323 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~  323 (373)
                      +.+++||+|..|++.|.++++|..|+       +|.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46789999999999999999999997       777764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=8.1e-07  Score=50.18  Aligned_cols=31  Identities=23%  Similarity=0.465  Sum_probs=19.1

Q ss_pred             ccCCCCccCCC--CcccccchhhhhhhhhhccC
Q psy10075        285 HYGLKPFKCSF--CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       285 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +++++||+|++  |++.|..++.|..|+++|.+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            45566666664  66666666666666655443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.17  E-value=1e-06  Score=48.16  Aligned_cols=23  Identities=17%  Similarity=0.462  Sum_probs=11.5

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |.|..|++.|....+|..|+++|
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H   25 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLH   25 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             ccCCCCCchhCCHHHHHHHHHHh
Confidence            44555555555555555555444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.13  E-value=2.7e-07  Score=50.21  Aligned_cols=30  Identities=17%  Similarity=0.589  Sum_probs=16.2

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCCCCc
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGLKPF  291 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  291 (373)
                      ||.|+.|++.|...+.|..|+ +.|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHI-KTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSST-TSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHH-HHHccCCCC
Confidence            455555555555555555555 455555443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=2.4e-06  Score=47.63  Aligned_cols=30  Identities=27%  Similarity=0.491  Sum_probs=19.4

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +++||.|++|++.|...+.|..|+ +.|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHM-LVHGDK   35 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHH-TTTSTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHH-HHhcCC
Confidence            356677777777777777777776 555543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.3e-06  Score=48.84  Aligned_cols=28  Identities=36%  Similarity=0.681  Sum_probs=15.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ++||.|++|++.|.....|..|+ +.|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHM-NRHST   34 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHH-HHSST
T ss_pred             CCCccCCCCCchhCCHHHHHHHH-HHhcc
Confidence            45555555555555555555555 44443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=2.9e-06  Score=47.28  Aligned_cols=30  Identities=30%  Similarity=0.702  Sum_probs=19.2

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +++||.|+.|++.|.....|..|+ +.|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHL-RKHTGE   35 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHH-HHccCC
Confidence            356666666666666666666666 555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.3e-06  Score=49.15  Aligned_cols=28  Identities=36%  Similarity=0.710  Sum_probs=14.3

Q ss_pred             CCCeecCCCCccccCh-hHHHHhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKK-YDMKMHMSRAHYG  287 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~-~~L~~H~~~~H~~  287 (373)
                      ++||.|+.|++.|... +.|..|+ +.|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~   35 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHI-WAHEG   35 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHH-HHHHT
T ss_pred             CCCeECCCCChhhccCHHHHHHHH-HhcCC
Confidence            4455555555555555 5555555 44433

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.6e-06  Score=48.42  Aligned_cols=31  Identities=29%  Similarity=0.584  Sum_probs=19.8

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      .|+++++|.|.+|++.|.....|..|++.|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            4556666666666666666666666665444

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=2.5e-06  Score=48.27  Aligned_cols=33  Identities=30%  Similarity=0.668  Sum_probs=24.6

Q ss_pred             CCCCeecC--CCCccccChhHHHHhhhhhccCCCCc
Q psy10075        258 EDKPFTCE--HCDSKFCKKYDMKMHMSRAHYGLKPF  291 (373)
Q Consensus       258 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~  291 (373)
                      +++||.|.  .|++.|...+.|..|+ +.|+++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHK-HKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHH-HHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHH-HHhCCCCCC
Confidence            46778887  4888888888888887 677777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1e-06  Score=49.67  Aligned_cols=22  Identities=23%  Similarity=0.451  Sum_probs=9.9

Q ss_pred             CCCeecCCCCccccChhHHHHh
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMH  280 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H  280 (373)
                      ++||.|+.|++.|...+.|..|
T Consensus         7 ~k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            7 GHLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             SCEEECSSSSCEEECHHHHHHH
T ss_pred             CcCeECCCCCcccCCHHHHHHH
Confidence            3444444444444444444444

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=3.4e-06  Score=47.02  Aligned_cols=33  Identities=42%  Similarity=0.753  Sum_probs=27.1

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      ..|++++||+|..|++.|...+.|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            357788899999999999999999999866554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=3.8e-06  Score=46.75  Aligned_cols=30  Identities=30%  Similarity=0.444  Sum_probs=18.5

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ++++|.|++|++.|.....|..|+ +.|+++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~e   35 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHK-LLHTAD   35 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHH-HHHSSC
T ss_pred             CCCCeecCcCCCCcCchHHHHHHH-HHhcCC
Confidence            356666666666666666666666 555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.6e-06  Score=47.48  Aligned_cols=30  Identities=30%  Similarity=0.275  Sum_probs=16.1

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      |+++++|.|.+|++.|.+...|..|++.|.
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            445555555555555555555555554433

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=4.1e-06  Score=46.66  Aligned_cols=30  Identities=37%  Similarity=0.620  Sum_probs=20.1

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +++||.|+.|++.|.....|..|+ +.|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHL-RIHTNE   35 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHH-HHHCCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHH-HHhCCC
Confidence            366777777777777777777777 555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=3.2e-06  Score=47.13  Aligned_cols=32  Identities=16%  Similarity=0.209  Sum_probs=20.5

Q ss_pred             CCCCcceecCCCCccccChhhHhhccccCCCC
Q psy10075         20 LDDSYNFICILCNYHAENFENIYLHLPSHFEQ   51 (373)
Q Consensus        20 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   51 (373)
                      |.+++||.|+.|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            45566666666666666666666666666543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.03  E-value=2.3e-06  Score=48.38  Aligned_cols=35  Identities=26%  Similarity=0.372  Sum_probs=21.0

Q ss_pred             ccCCCCccCC--CCcccccchhhhhhhhhhccCCCcc
Q psy10075        285 HYGLKPFKCS--FCEYKCTTKFGLKSHVTRIHSNQKY  319 (373)
Q Consensus       285 H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~  319 (373)
                      |+++++|.|.  .|++.|...+.|..|++.|.++.+|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4456666666  3666666666666666555555443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=4.1e-06  Score=47.00  Aligned_cols=34  Identities=15%  Similarity=0.385  Sum_probs=28.5

Q ss_pred             hhccCCCCccCCCCcccccch-hhhhhhhhhccCC
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTK-FGLKSHVTRIHSN  316 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h~~  316 (373)
                      +.|+++++|.|..|++.|... +.|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            467888999999999999998 9999998766543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.4e-06  Score=48.06  Aligned_cols=33  Identities=18%  Similarity=0.331  Sum_probs=20.0

Q ss_pred             ecCCCCcceecCCCCccccChhhHhhc-cccCCC
Q psy10075         18 SRLDDSYNFICILCNYHAENFENIYLH-LPSHFE   50 (373)
Q Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~   50 (373)
                      +.|.+++||.|+.|++.|.....|..| +..|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            345556666666666666666666666 555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.00  E-value=4.4e-06  Score=43.80  Aligned_cols=28  Identities=21%  Similarity=0.581  Sum_probs=18.0

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||.|+.|++.|.....|..|+ +.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHI-LLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHH-TGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhcCC
Confidence            3566777777777777777776 555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=4.6e-06  Score=44.06  Aligned_cols=28  Identities=25%  Similarity=0.577  Sum_probs=18.4

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||.|..|++.|.....|..|+ +.|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL-ETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HHhccC
Confidence            5667777777777777777776 555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.00  E-value=9.2e-07  Score=47.99  Aligned_cols=31  Identities=19%  Similarity=0.385  Sum_probs=24.9

Q ss_pred             cceecCCCCccccChhhHhhccccCCCCCcc
Q psy10075         24 YNFICILCNYHAENFENIYLHLPSHFEQKLF   54 (373)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   54 (373)
                      +||.|+.|++.|.....|..|++.|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4678888888888888888888888877765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.00  E-value=2.3e-06  Score=51.38  Aligned_cols=30  Identities=23%  Similarity=0.727  Sum_probs=14.9

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ++||.|.+|++.|.....|..|++..|+++
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            455555555555555555555552144443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=3.1e-06  Score=47.15  Aligned_cols=30  Identities=23%  Similarity=0.398  Sum_probs=17.1

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      |.++++|.|+.|++.|.....|..|++.|.
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            445556666666666666666666654443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.95  E-value=6e-06  Score=43.22  Aligned_cols=27  Identities=33%  Similarity=0.721  Sum_probs=17.3

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ||.|+.|++.|.....|..|+ +.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHH-HHhcCC
Confidence            566666777766666666666 455543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=6.4e-06  Score=42.77  Aligned_cols=25  Identities=36%  Similarity=0.925  Sum_probs=15.4

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      +||.|+.|++.|.....|..|+ +.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY-RVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH-TTS
T ss_pred             cCccCCCCCcccCCHHHHHHHH-Hhc
Confidence            4566666666666666666666 444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=6.2e-06  Score=42.45  Aligned_cols=25  Identities=36%  Similarity=0.745  Sum_probs=15.9

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      +||.|+.||+.|...+.|..|+ +.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL-RTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-HHC
T ss_pred             cCccCCCcChhhCCHHHHHHHH-HHc
Confidence            4566666666666666666666 444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.93  E-value=4.9e-06  Score=42.90  Aligned_cols=25  Identities=32%  Similarity=0.685  Sum_probs=15.8

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      +||.|+.||+.|...+.|..|+ +.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM-RGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH-TTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHH-Hhc
Confidence            4566666666666666666666 444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.93  E-value=6.2e-06  Score=49.45  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=25.0

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhh-hccCC
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVT-RIHSN  316 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~  316 (373)
                      +|+++++|.|.+|++.|.....|..|++ .|.++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            3778888888888888888888888886 44443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.89  E-value=6.8e-06  Score=42.99  Aligned_cols=28  Identities=32%  Similarity=0.761  Sum_probs=18.7

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||.|+.|++.|.....|..|+ +.|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHL-RIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHH-HHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHH-HHhcCC
Confidence            3567777777777777777777 555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=1.2e-05  Score=43.31  Aligned_cols=28  Identities=29%  Similarity=0.802  Sum_probs=18.1

Q ss_pred             CCeecC--CCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCE--HCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||.|+  .|++.|...+.|..|+ +.|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHH-HHccCC
Confidence            466666  6777777777777776 555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=2.3e-06  Score=51.18  Aligned_cols=27  Identities=22%  Similarity=0.541  Sum_probs=12.2

Q ss_pred             ccCCCCccCC--CCcccccchhhhhhhhh
Q psy10075        285 HYGLKPFKCS--FCEYKCTTKFGLKSHVT  311 (373)
Q Consensus       285 H~~~~~~~C~--~C~~~f~~~~~l~~H~~  311 (373)
                      |++++||.|.  .|++.|...+.|..|++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            4444444442  34444444444444443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.86  E-value=1.1e-05  Score=43.04  Aligned_cols=27  Identities=33%  Similarity=0.829  Sum_probs=17.1

Q ss_pred             CeecC--CCCccccChhHHHHhhhhhccCC
Q psy10075        261 PFTCE--HCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       261 ~~~C~--~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ||.|+  .||+.|...+.|..|+ +.|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHK-RTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHH-TTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHH-HHhcCC
Confidence            56665  6666666666666666 555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.86  E-value=7.8e-06  Score=43.12  Aligned_cols=20  Identities=20%  Similarity=0.712  Sum_probs=8.5

Q ss_pred             eecCCCCccccChhHHHHhh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~  281 (373)
                      |.|+.|++.|...+.|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHI   22 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHH
T ss_pred             ccCCCCCCccCCHHHHHHHH
Confidence            34444444444444444444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.85  E-value=1e-05  Score=42.61  Aligned_cols=29  Identities=31%  Similarity=0.854  Sum_probs=23.1

Q ss_pred             CCccCCCCcccccchhhhhhhhhhccCCC
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQ  317 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  317 (373)
                      ++|.|..|++.|...+.|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46888888888888888888887777654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.85  E-value=1.2e-05  Score=45.13  Aligned_cols=30  Identities=27%  Similarity=0.570  Sum_probs=19.5

Q ss_pred             CCCCeecCC--CCccccChhHHHHhhhhhccCC
Q psy10075        258 EDKPFTCEH--CDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       258 ~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +++||.|.+  |++.|...+.|..|+ +.|+++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~e   36 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHL-RWHTGE   36 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHH-HHHHTT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            366677763  777777777777776 556554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.84  E-value=8.2e-06  Score=42.62  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=15.9

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ||.|+.|++.|.....|..|+ +.|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHL-KIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHH-HHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHH-HHhcc
Confidence            566666666666666666666 44544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.83  E-value=8.2e-06  Score=42.34  Aligned_cols=24  Identities=25%  Similarity=0.699  Sum_probs=13.0

Q ss_pred             CCccCCCCcccccchhhhhhhhhh
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTR  312 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~  312 (373)
                      ++|.|..|++.|.+.+.|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh
Confidence            445555555555555555555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.82  E-value=1.2e-05  Score=41.16  Aligned_cols=24  Identities=29%  Similarity=0.725  Sum_probs=13.7

Q ss_pred             eecCCCCccccChhHHHHhhhhhcc
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      |.|+.|++.|.....|..|+ +.|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~-~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQ-RVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHH-HHcC
Confidence            55666666666666666665 4443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.82  E-value=7.9e-06  Score=45.82  Aligned_cols=30  Identities=17%  Similarity=0.195  Sum_probs=17.7

Q ss_pred             ccCCCCccCCC--Ccccccchhhhhhhhhhcc
Q psy10075        285 HYGLKPFKCSF--CEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       285 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  314 (373)
                      |+++++|.|.+  |++.|...+.|..|++.|.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            45556666653  6666666666666664443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.82  E-value=1.3e-05  Score=42.33  Aligned_cols=28  Identities=21%  Similarity=0.561  Sum_probs=16.3

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ||.|+.|++.|...+.|..|+.+.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            5666666666666666666622555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.81  E-value=1e-05  Score=42.31  Aligned_cols=25  Identities=20%  Similarity=0.321  Sum_probs=13.9

Q ss_pred             CccCCCCcccccchhhhhhhhhhcc
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      ||.|+.|++.|...+.|..|++.|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhc
Confidence            4555555555555555555554443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.80  E-value=4.8e-06  Score=49.70  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=19.1

Q ss_pred             eeecCCCCcceecC--CCCccccChhhHhhccccCCC
Q psy10075         16 FVSRLDDSYNFICI--LCNYHAENFENIYLHLPSHFE   50 (373)
Q Consensus        16 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   50 (373)
                      |+..|.+++||.|+  .|++.|.....|..|++.|.+
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            33445555556663  466665555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=2.9e-06  Score=44.57  Aligned_cols=26  Identities=31%  Similarity=0.710  Sum_probs=14.2

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ||.|+.|++.|...+.|..|+ +.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHV-RQHTG   27 (29)
Confidence            455555555555555555555 44443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.79  E-value=8.9e-06  Score=41.81  Aligned_cols=23  Identities=30%  Similarity=0.732  Sum_probs=11.8

Q ss_pred             CCccCCCCcccccchhhhhhhhh
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVT  311 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~  311 (373)
                      +||.|..|++.|.+.+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLR   24 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHH
Confidence            34555555555555555555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=1.1e-05  Score=42.49  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=18.8

Q ss_pred             cceecCCCCccccChhhHhhccccCCCC
Q psy10075         24 YNFICILCNYHAENFENIYLHLPSHFEQ   51 (373)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   51 (373)
                      +||.|+.|++.|.....|..|++.|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4667777777777777777776666543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.7e-06  Score=44.49  Aligned_cols=26  Identities=35%  Similarity=0.842  Sum_probs=14.2

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhcc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      +||.|+.|++.|.....|..|+ +.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~   27 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHV-RIHT   27 (30)
Confidence            3455555555555555555555 4443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.75  E-value=1.5e-05  Score=41.67  Aligned_cols=24  Identities=17%  Similarity=0.513  Sum_probs=13.6

Q ss_pred             cccCCCCCCCccChhHHHHHHHhh
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      +|.|..|++.|.....|..|++.|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHHh
Confidence            355555555555555555555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.75  E-value=2.6e-05  Score=49.99  Aligned_cols=31  Identities=19%  Similarity=0.326  Sum_probs=21.4

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      .+++||.|..|++.|.....|..|+ +.|+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~-r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHE-AQHGVT   39 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHH-HHHTTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhh-hhhCCC
Confidence            3467777777777777777777777 556654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.72  E-value=2.6e-05  Score=50.03  Aligned_cols=42  Identities=14%  Similarity=0.183  Sum_probs=32.0

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCC
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNF  326 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~  326 (373)
                      .+..++||+|..|++.|.....|..|++.|.+ ....+.+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg-~~~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGV-TSLQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTT-TSCCCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCC-CccccccccC
Confidence            46778899999999999999999999866555 4455655553

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.71  E-value=1.4e-05  Score=41.06  Aligned_cols=25  Identities=20%  Similarity=0.513  Sum_probs=17.1

Q ss_pred             cceecCCCCccccChhhHhhccccC
Q psy10075         24 YNFICILCNYHAENFENIYLHLPSH   48 (373)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h   48 (373)
                      +||.|+.|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4677777777777777777776655

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.71  E-value=1.8e-05  Score=40.54  Aligned_cols=23  Identities=30%  Similarity=0.621  Sum_probs=11.3

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |.|..|++.|.....|..|+++|
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHc
Confidence            44555555555555555554444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.71  E-value=3.4e-05  Score=49.23  Aligned_cols=15  Identities=33%  Similarity=0.381  Sum_probs=6.9

Q ss_pred             CcccccChHHHhhhh
Q psy10075        236 CDYICSSRTILKSHI  250 (373)
Q Consensus       236 C~~~f~~~~~l~~H~  250 (373)
                      |++.|.+...|..|+
T Consensus         9 C~~~f~~~~~l~~Hv   23 (64)
T 1zw8_A            9 CPESASSLFDLQRHL   23 (64)
T ss_dssp             CCCCCSSHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHH
Confidence            444444444444444

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.70  E-value=1.7e-05  Score=41.33  Aligned_cols=24  Identities=17%  Similarity=0.369  Sum_probs=13.4

Q ss_pred             cccCCCCCCCccChhHHHHHHHhh
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      +|.|+.|++.|....+|..|++.|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHh
Confidence            355555555555555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.84  E-value=6.1e-06  Score=42.01  Aligned_cols=21  Identities=29%  Similarity=0.937  Sum_probs=11.0

Q ss_pred             CeecCCCCccccChhHHHHhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      ||.|+.||+.|...+.|..|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHI   22 (26)
Confidence            455555555555555555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.83  E-value=6.4e-06  Score=43.21  Aligned_cols=24  Identities=29%  Similarity=0.542  Sum_probs=13.4

Q ss_pred             CccCCCCcccccchhhhhhhhhhc
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      ||.|..|++.|...++|..|++.|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            455555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=2e-05  Score=41.11  Aligned_cols=23  Identities=22%  Similarity=0.488  Sum_probs=11.7

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |.|..|++.|....+|..|++.|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHHh
Confidence            44555555555555555555444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.63  E-value=3.7e-05  Score=41.22  Aligned_cols=24  Identities=21%  Similarity=0.552  Sum_probs=11.9

Q ss_pred             CCccCC--CCcccccchhhhhhhhhh
Q psy10075        289 KPFKCS--FCEYKCTTKFGLKSHVTR  312 (373)
Q Consensus       289 ~~~~C~--~C~~~f~~~~~l~~H~~~  312 (373)
                      +||.|.  .|++.|...+.|..|++.
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHH
Confidence            345555  455555555555555433

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.63  E-value=3.1e-05  Score=41.21  Aligned_cols=23  Identities=30%  Similarity=0.697  Sum_probs=11.1

Q ss_pred             CccCC--CCcccccchhhhhhhhhh
Q psy10075        290 PFKCS--FCEYKCTTKFGLKSHVTR  312 (373)
Q Consensus       290 ~~~C~--~C~~~f~~~~~l~~H~~~  312 (373)
                      ||.|.  .|++.|...+.|..|++.
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH
Confidence            44454  455555555555555433

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.79  E-value=7.6e-06  Score=41.64  Aligned_cols=22  Identities=23%  Similarity=0.602  Sum_probs=12.1

Q ss_pred             CccCCCCcccccchhhhhhhhh
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVT  311 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~  311 (373)
                      ||.|..|++.|...+.|..|++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            4555555555555555555553

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.78  E-value=7.9e-06  Score=43.15  Aligned_cols=25  Identities=28%  Similarity=0.549  Sum_probs=13.4

Q ss_pred             CCccCCCCcccccchhhhhhhhhhc
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      +||.|..|++.|.+...|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            3455555555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.52  E-value=4.6e-05  Score=40.05  Aligned_cols=26  Identities=23%  Similarity=0.340  Sum_probs=15.6

Q ss_pred             ceecCCCCccccChhhHhhc-cccCCC
Q psy10075         25 NFICILCNYHAENFENIYLH-LPSHFE   50 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H-~~~h~~   50 (373)
                      ||.|+.|++.|.+...|..| +..|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            55666666666666666666 455544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.51  E-value=0.00017  Score=45.97  Aligned_cols=49  Identities=18%  Similarity=0.535  Sum_probs=33.6

Q ss_pred             CCCccccChhHHHHhhhhhccCCC------CccCC--CCcccccchhhhhhhhhhcc
Q psy10075        266 HCDSKFCKKYDMKMHMSRAHYGLK------PFKCS--FCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       266 ~C~~~f~~~~~L~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  314 (373)
                      .|++.|.+...|..|+...|.+.+      +|.|.  -|++.+.....|..|++..|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            377777777777777755666554      67776  37777777777777776543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.46  E-value=7.7e-05  Score=38.71  Aligned_cols=25  Identities=20%  Similarity=0.634  Sum_probs=16.0

Q ss_pred             CeecC--CCCccccChhHHHHhhhhhcc
Q psy10075        261 PFTCE--HCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       261 ~~~C~--~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      +|.|+  .|++.|...+.|..|+ +.|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~-~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHK-KIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHH-GGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHH-HHhC
Confidence            56666  6666666666666666 4443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.16  E-value=0.00017  Score=37.34  Aligned_cols=25  Identities=16%  Similarity=0.341  Sum_probs=16.1

Q ss_pred             ceecC--CCCccccChhhHhhccccCC
Q psy10075         25 NFICI--LCNYHAENFENIYLHLPSHF   49 (373)
Q Consensus        25 ~~~C~--~C~~~f~~~~~l~~H~~~h~   49 (373)
                      +|.|+  .|++.|.....|..|++.|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  66666666666666666553

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.26  E-value=0.00082  Score=49.40  Aligned_cols=25  Identities=20%  Similarity=0.357  Sum_probs=20.4

Q ss_pred             CCCcccCCCCCCCccChhHHHHHHH
Q psy10075        315 SNQKYFCGSCNFSCTSNTDLLEHVQ  339 (373)
Q Consensus       315 ~~~~~~C~~C~~~f~~~~~l~~H~~  339 (373)
                      +...|.|.+|++.|.+...+..|+.
T Consensus        90 ~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           90 EDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3444889999999999999999875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.79  E-value=0.0041  Score=35.48  Aligned_cols=25  Identities=28%  Similarity=0.300  Sum_probs=19.4

Q ss_pred             CCcceecCCCCccccChhhHhhccc
Q psy10075         22 DSYNFICILCNYHAENFENIYLHLP   46 (373)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~   46 (373)
                      +.++|.|+.|+..|...+.|..|++
T Consensus         9 ~~~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A            9 DGGRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CSSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             cCCceeCCcccccccchHHHHhhhh
Confidence            4467888888888888888888876

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.63  E-value=0.0087  Score=43.86  Aligned_cols=76  Identities=14%  Similarity=0.166  Sum_probs=49.9

Q ss_pred             CcceecCCCCccccChhhHhhcc--ccCCCC-CccccCcC------cccccchHHHHHHhhhhhccCCccccCccccccC
Q psy10075         23 SYNFICILCNYHAENFENIYLHL--PSHFEQ-KLFSCDLC------EYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFS   93 (373)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~   93 (373)
                      .+++.|.+|+..|.+...+..|.  +.|... +.+.+...      +..+...    .+ ...+.+...|.|.+|+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PA-EISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SS-CCSSCCCTTTEETTTTEECS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----cc-ccccCCCCCeEcCCCCCEeC
Confidence            46789999999999999999998  444321 12222100      1112111    12 12345677899999999999


Q ss_pred             CchHHHHHHh
Q psy10075         94 DNMDLKKHIQ  103 (373)
Q Consensus        94 ~~~~l~~H~~  103 (373)
                      +...+..|+.
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9999999963

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.50  E-value=0.003  Score=45.50  Aligned_cols=23  Identities=22%  Similarity=0.479  Sum_probs=11.9

Q ss_pred             CCCeecCCCCccccChhHHHHhh
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      +++|.|..|++.|.+...|..|+
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHT
T ss_pred             CcceEcccCcchhCCHHHHHHHH
Confidence            44555555555555555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.14  E-value=0.018  Score=32.93  Aligned_cols=22  Identities=23%  Similarity=0.437  Sum_probs=12.9

Q ss_pred             cccCCCCCCCccChhHHHHHHH
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQ  339 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~  339 (373)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            3556666666666666666655

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.11  E-value=0.016  Score=45.00  Aligned_cols=78  Identities=17%  Similarity=0.286  Sum_probs=40.8

Q ss_pred             ceec--CCCcccccChHHHhhhhhccCCCCCCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhh
Q psy10075        230 EYHC--TYCDYICSSRTILKSHINKKHANDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLK  307 (373)
Q Consensus       230 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  307 (373)
                      ...|  ..|+... ....+..|.. .   =..++..|+.|+..+ ....|..|+ ...=..++-.|+.|+..+ ....|.
T Consensus        82 ~v~C~n~GC~~~~-~~~~l~~H~~-~---C~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~r~~~C~~C~~~~-~~~~l~  153 (170)
T 3hcs_A           82 MVKCPNEGCLHKM-ELRHLEDHQA-H---CEFALMDCPQCQRPF-QKFHINIHI-LKDCPRRQVSCDNCAASM-AFEDKE  153 (170)
T ss_dssp             EEECCSTTCCCEE-EGGGHHHHHT-T---CTTSEEECTTTCCEE-EGGGHHHHH-HHTCTTCEEECTTTCCEE-EGGGHH
T ss_pred             ccCCCCCCCCcee-cHhHHHHHHh-c---CCceeeECCCCChHH-HHHHHHHHh-hhhCCCCCeECCCCCCcc-CHHHHH
Confidence            3445  3455433 2345556642 1   123456677776666 455566666 333344455677776665 345566


Q ss_pred             hhhhhccC
Q psy10075        308 SHVTRIHS  315 (373)
Q Consensus       308 ~H~~~~h~  315 (373)
                      .|.....+
T Consensus       154 ~H~~~~~~  161 (170)
T 3hcs_A          154 IHDQNCPL  161 (170)
T ss_dssp             HHHTTCCC
T ss_pred             hHHHhCcC
Confidence            66644433

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.40  E-value=0.012  Score=42.41  Aligned_cols=28  Identities=18%  Similarity=0.281  Sum_probs=17.0

Q ss_pred             ccCCCCCccccCcCcccccchHHHHHHh
Q psy10075         46 PSHFEQKLFSCDLCEYQTNTKIYIRRHM   73 (373)
Q Consensus        46 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~   73 (373)
                      .-++++++|.|..|++.|.+...|..|+
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHH
Confidence            4455666666666666666666666663

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.00  E-value=0.035  Score=43.08  Aligned_cols=141  Identities=15%  Similarity=0.261  Sum_probs=70.9

Q ss_pred             CcceecCCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHHhhhhhccCCccccCccccccCCch-----H
Q psy10075         23 SYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECSLCDSTFSDNM-----D   97 (373)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~-----~   97 (373)
                      ...|.|++|...|...               ..+ .||-.|-. .-+.... ..    ....|+.|...+....     .
T Consensus        16 ~~~~~C~IC~~~~~~p---------------v~~-~CgH~fC~-~Ci~~~~-~~----~~~~CP~Cr~~~~~~~~~~~~~   73 (170)
T 3hcs_A           16 ESKYECPICLMALREA---------------VQT-PCGHRFCK-ACIIKSI-RD----AGHKCPVDNEILLENQLFPDNF   73 (170)
T ss_dssp             CGGGBCTTTCSBCSSE---------------EEC-TTSCEEEH-HHHHHHH-HH----HCSBCTTTCCBCCGGGCEECHH
T ss_pred             CCCCCCCCCChhhcCc---------------EEC-CCCCHHHH-HHHHHHH-Hh----CCCCCCCCccCcchhhhhhhHH
Confidence            3457788887776542               222 35555533 2233321 11    1137888876655421     1


Q ss_pred             HHHHHhhhcCCCCCccc--CCCCccccChHHHHHhhhcccCCCCCCcccccccccccCHHHHHHHHhhhccCCCceeccc
Q psy10075         98 LKKHIQRKHTNDRPFSC--NFCDYKSKTKYDITSHSLRKHSKGDKPHKCTICESTYLTKVELKNHILKIHQGQTRFQCSF  175 (373)
Q Consensus        98 l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~h~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~  175 (373)
                      +..-+     .+....|  .-|+.... ...+..|..  .- .-.+..|+.|+..+ .+..|..|+ ...-..+...|..
T Consensus        74 ~~~~i-----~~l~v~C~n~GC~~~~~-~~~l~~H~~--~C-~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~r~~~C~~  142 (170)
T 3hcs_A           74 AKREI-----LSLMVKCPNEGCLHKME-LRHLEDHQA--HC-EFALMDCPQCQRPF-QKFHINIHI-LKDCPRRQVSCDN  142 (170)
T ss_dssp             HHHHH-----HTSEEECCSTTCCCEEE-GGGHHHHHT--TC-TTSEEECTTTCCEE-EGGGHHHHH-HHTCTTCEEECTT
T ss_pred             HHHHH-----hhcccCCCCCCCCceec-HhHHHHHHh--cC-CceeeECCCCChHH-HHHHHHHHh-hhhCCCCCeECCC
Confidence            11111     1234455  34665443 455666632  22 33456677777665 455666675 3444556666777


Q ss_pred             ccccccchhHHHhhhhhccCCCC
Q psy10075        176 CDRRFYFKNECTKHYLEHHTNEK  198 (373)
Q Consensus       176 C~~~f~~~~~l~~H~~~~h~~~~  198 (373)
                      |+..+. ...+..|. ..+.|+.
T Consensus       143 C~~~~~-~~~l~~H~-~~~~~~~  163 (170)
T 3hcs_A          143 CAASMA-FEDKEIHD-QNCPLAL  163 (170)
T ss_dssp             TCCEEE-GGGHHHHH-TTCCC--
T ss_pred             CCCccC-HHHHHhHH-HhCcChh
Confidence            776665 34556664 4444443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.57  E-value=0.058  Score=28.79  Aligned_cols=25  Identities=28%  Similarity=0.545  Sum_probs=18.3

Q ss_pred             ccCCCCCCCccChhHHHHHHHhhcc
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTNHI  343 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H~  343 (373)
                      |.|++|-+.+.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            6777777777777777777776664

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.23  E-value=0.075  Score=28.35  Aligned_cols=25  Identities=20%  Similarity=0.450  Sum_probs=14.8

Q ss_pred             eecCCCCccccChhHHHHhhhhhcc
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      |.||+|.+.|.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            5666666666666666666544454

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=93.06  E-value=0.18  Score=32.90  Aligned_cols=60  Identities=13%  Similarity=0.268  Sum_probs=43.7

Q ss_pred             cccccceeecCCCCcceec-CCCCccccChhhHhhccccCCCCCccccCcCcccccchHHHHHH
Q psy10075         10 HSRECAFVSRLDDSYNFIC-ILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQTNTKIYIRRH   72 (373)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~C-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   72 (373)
                      +++|..|+ ......+..| ..|+..+.. ..|..|+...-...+..|..|+..+.. ..|..|
T Consensus         2 ~~~l~~H~-~~C~~~~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H   62 (76)
T 2yuc_A            2 SSGSSGHL-NTCSFNVIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESH   62 (76)
T ss_dssp             CCSCSCCC-CCCCCSCCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHT
T ss_pred             chHHHHHH-HHCCCcccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCH-HHHHHH
Confidence            45677888 4557778889 579888765 568888875556677888888887754 556777

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=88.89  E-value=0.31  Score=27.74  Aligned_cols=11  Identities=27%  Similarity=0.884  Sum_probs=4.3

Q ss_pred             eecCCCCcccc
Q psy10075        262 FTCEHCDSKFC  272 (373)
Q Consensus       262 ~~C~~C~~~f~  272 (373)
                      |.|..||+.|+
T Consensus         4 Y~C~rCg~~fs   14 (48)
T 4ayb_P            4 YRCGKCWKTFT   14 (48)
T ss_dssp             -CCCCTTTTCC
T ss_pred             EEeeccCCCcc
Confidence            34444444443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.38  E-value=0.35  Score=24.79  Aligned_cols=24  Identities=38%  Similarity=0.811  Sum_probs=17.6

Q ss_pred             ccCccccccCCchHHHHHHhhhcC
Q psy10075         84 ECSLCDSTFSDNMDLKKHIQRKHT  107 (373)
Q Consensus        84 ~C~~C~~~f~~~~~l~~H~~~~h~  107 (373)
                      .|..|.+.+++..+|..|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            477777778888888887766654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.96  E-value=0.37  Score=31.15  Aligned_cols=57  Identities=26%  Similarity=0.336  Sum_probs=34.0

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhccCCCc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSNQK  318 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  318 (373)
                      .-.|.|..||.+++ +..|..|. ..-.+-..|.|-.|+..|. ...++.|..=....+.
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~-~~Cr~~~~~SCIDC~~~F~-~~~y~~HtsCISEaeK   64 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHV-SNCRNCECLSCIDCGKDFW-GDDYKSHVKCISEGQK   64 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHH-HHCTTCCEEEETTTTEEEE-GGGTTTCCCCCSCTTS
T ss_pred             eeEEEcCCCCCeee-cccchhHH-hhCCCCCcEEecccCCeeC-CCCEeCEeeeCChhhe
Confidence            34567777776664 45677776 3333444577777877775 3566676533333333

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.61  E-value=0.52  Score=24.17  Aligned_cols=23  Identities=22%  Similarity=0.618  Sum_probs=14.6

Q ss_pred             cCCCCCCCccChhHHHHHHHhhc
Q psy10075        320 FCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      .|..|.+.++.-.+|..|++..|
T Consensus        11 hcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            36666666666666666666554

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=85.35  E-value=0.83  Score=24.42  Aligned_cols=22  Identities=27%  Similarity=0.510  Sum_probs=12.4

Q ss_pred             CceecccccccccchhHHHhhh
Q psy10075        169 TRFQCSFCDRRFYFKNECTKHY  190 (373)
Q Consensus       169 ~~~~C~~C~~~f~~~~~l~~H~  190 (373)
                      ..+.|..|+.+|.+...++.|.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhh
Confidence            3455556666666555666553

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=84.87  E-value=0.54  Score=27.06  Aligned_cols=10  Identities=20%  Similarity=1.049  Sum_probs=4.8

Q ss_pred             eecCCCCccc
Q psy10075        262 FTCEHCDSKF  271 (373)
Q Consensus       262 ~~C~~C~~~f  271 (373)
                      |+|.+||..|
T Consensus         5 y~C~vCGyvy   14 (46)
T 6rxn_A            5 YVCNVCGYEY   14 (46)
T ss_dssp             EEETTTCCEE
T ss_pred             EECCCCCeEE
Confidence            4445554444

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=84.49  E-value=1.8  Score=25.52  Aligned_cols=45  Identities=27%  Similarity=0.527  Sum_probs=21.4

Q ss_pred             cCCCCcccccchhhhhhhhhhccCCCcccCCCCC-CCccChhHHHHHHH
Q psy10075        292 KCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCN-FSCTSNTDLLEHVQ  339 (373)
Q Consensus       292 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~-~~f~~~~~l~~H~~  339 (373)
                      .|.+|.....+...|..|...-..++   |++|- ..-++.+.|+.|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~gq---CPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCINGQ---CPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTTB---CTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCCC---CCcccCcCCcCHHHHHHHHH
Confidence            45555555555555555553333333   55543 22234555555543

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=84.44  E-value=0.67  Score=31.58  Aligned_cols=48  Identities=25%  Similarity=0.427  Sum_probs=26.7

Q ss_pred             cccCcCcccccchHHHHHHhhhhhccCCccccC---ccccccCCchHHHHHHhhhcCCC
Q psy10075         54 FSCDLCEYQTNTKIYIRRHMLKIHLRQRNLECS---LCDSTFSDNMDLKKHIQRKHTND  109 (373)
Q Consensus        54 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~---~C~~~f~~~~~l~~H~~~~h~~~  109 (373)
                      -.|+.|...+...        ..+..+..|.|+   .|.++|.+..+|+.|+...|...
T Consensus        38 k~Cp~C~~~V~rV--------e~~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~   88 (101)
T 3vk6_A           38 KMCPGCSDPVQRI--------EQCTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRA   88 (101)
T ss_dssp             CBCTTTCCBCSEE--------EEEEGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTS
T ss_pred             CCCcCcCCeeeee--------EEeccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhc
Confidence            3566666555543        112234456665   36666666666666666656544

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=83.17  E-value=0.61  Score=24.93  Aligned_cols=20  Identities=20%  Similarity=0.228  Sum_probs=10.7

Q ss_pred             ccccCcCcccccchHHHHHH
Q psy10075         53 LFSCDLCEYQTNTKIYIRRH   72 (373)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H   72 (373)
                      .+.|..|+..|++...+..|
T Consensus         8 ~~~C~~C~IsF~~l~ty~aH   27 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAH   27 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhh
Confidence            34555555555555555555

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=82.56  E-value=0.53  Score=27.73  Aligned_cols=23  Identities=13%  Similarity=0.394  Sum_probs=17.7

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      -.|.+|+..|.....++.|+.+.
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs~   36 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFSK   36 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTSH
T ss_pred             ccccccCcccccccchhhhhccH
Confidence            57888888888888888887644

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=81.77  E-value=1.8  Score=29.46  Aligned_cols=52  Identities=19%  Similarity=0.382  Sum_probs=38.2

Q ss_pred             CCccCCCCcccccchhhhhhhhhhccCCCcccCC---CCCCCccChhHHHHHHHhhcccccc
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCG---SCNFSCTSNTDLLEHVQTNHIIVGE  347 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~---~C~~~f~~~~~l~~H~~~~H~~~~~  347 (373)
                      +.-.|+.|...+.....   +    -.+..|.|+   -|.++|.+..+|+.|+..-|...+.
T Consensus        36 ~~k~Cp~C~~~V~rVe~---~----~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~   90 (101)
T 3vk6_A           36 GDKMCPGCSDPVQRIEQ---C----TRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGK   90 (101)
T ss_dssp             TCCBCTTTCCBCSEEEE---E----EGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCC
T ss_pred             cCCCCcCcCCeeeeeEE---e----ccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCC
Confidence            34569999887755432   2    225569998   4999999999999999988865544

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=80.58  E-value=0.9  Score=22.94  Aligned_cols=22  Identities=27%  Similarity=0.822  Sum_probs=18.4

Q ss_pred             ceecCCCCccccChhhHhhccc
Q psy10075         25 NFICILCNYHAENFENIYLHLP   46 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~   46 (373)
                      .|.|++|....++...|..|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4789999999999988888854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	373
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 6e-06
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKC 293
            KP+ C+ C   F +   +  H+ + H   +P KC
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 171 FQCSFCDRRFYFKNECTKHYLEHHTNEKPFKCTL 204
           + C  C + F   +    H  + HT+E+P KC +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 84  ECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCN 115
            C  C   FS    L  HI++ HT++RP  C 
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 109 DRPFSCNFCDYKSKTKYDITSHSLRKHSKGDKPHKCTI 146
            +P+ C  C         +  H  + H+  ++PHKC +
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHT-SERPHKCQV 39

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 23/34 (67%)

Query: 194 HTNEKPFKCTLCSYKAKRNFELKQHILRIHQDNI 227
           H+ EKP++C +C  +  ++  +K HIL+ H +N+
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS 315
           R H G KP++C  C  + T    +K H+ + H+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	373
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.48
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.98
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.94
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.89
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.89
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.83
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.81
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.8
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.78
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.76
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.75
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.74
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.66
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.61
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.59
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.54
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.52
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.48
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.4
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.37
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.33
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.32
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.26
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.22
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.17
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.07
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.05
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.9
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.82
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.78
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.73
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.73
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.71
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.71
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.69
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.65
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.58
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.56
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.52
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.42
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.31
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.31
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.25
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.25
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.16
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.13
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.13
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.13
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.11
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.04
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.98
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.96
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.88
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.79
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.79
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.76
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.73
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.72
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.71
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.7
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.63
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.46
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.46
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.28
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.19
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.16
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.1
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.86
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.85
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.85
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.71
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.61
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.35
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.0
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.64
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.55
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.35
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.21
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.13
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.09
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.61
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.54
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.89
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.85
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.24
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.17
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.08
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.08
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.13
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.85
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.63
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.33
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	87.89
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	87.31
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.27
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.13
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.91
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.65
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.42
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.18
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.25
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	80.5

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=9.7e-16  Score=93.61  Aligned_cols=53  Identities=34%  Similarity=0.708  Sum_probs=45.6

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccccchhhhhhhhhhc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      |+||.|. ||++|.....|..|+ ++|++++||.|.+||+.|...+.|..|++.|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5789994 999999999999998 7889999999999999999999999988554

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.8e-15  Score=89.26  Aligned_cols=53  Identities=23%  Similarity=0.405  Sum_probs=50.2

Q ss_pred             CCCccCCCCcccccchhhhhhhhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        288 LKPFKCSFCEYKCTTKFGLKSHVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ++||+|. ||+.|....+|..|++.|.++.+|.|..||+.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 9999999999999999998989999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.4e-12  Score=71.85  Aligned_cols=38  Identities=26%  Similarity=0.711  Sum_probs=33.9

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccCCCCccCCC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSF  295 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  295 (373)
                      .++||.|..||+.|...+.|..|++++|++++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            47899999999999999999999867899999999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.9e-11  Score=64.76  Aligned_cols=36  Identities=33%  Similarity=0.697  Sum_probs=20.1

Q ss_pred             CCccccCccccccCCchHHHHHHhhhcCCCCCcccC
Q psy10075         80 QRNLECSLCDSTFSDNMDLKKHIQRKHTNDRPFSCN  115 (373)
Q Consensus        80 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~  115 (373)
                      ++||+|..||+.|.....|..|++++|++++||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            455555555555555555555554455555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=8.3e-11  Score=63.72  Aligned_cols=33  Identities=30%  Similarity=0.650  Sum_probs=20.0

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccCC
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  316 (373)
                      +|++++||+|++|++.|..+++|..|++++|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            456666666666666666666666665555544

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.9e-10  Score=63.38  Aligned_cols=37  Identities=11%  Similarity=0.147  Sum_probs=25.1

Q ss_pred             ceeecCCCCcceecCCCCccccChhhHhhccccCCCC
Q psy10075         15 AFVSRLDDSYNFICILCNYHAENFENIYLHLPSHFEQ   51 (373)
Q Consensus        15 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   51 (373)
                      +|+.+|++++||.|+.|++.|.....|..|++.|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4666677777777777777777777777776666653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.1e-10  Score=62.26  Aligned_cols=31  Identities=39%  Similarity=0.692  Sum_probs=17.3

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      +|++++||+|.+|++.|..+++|..|++.|+
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            4555555555555555555555555554443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=2.8e-10  Score=62.20  Aligned_cols=30  Identities=33%  Similarity=0.630  Sum_probs=16.5

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhhhh
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHVTR  312 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  312 (373)
                      +.|++++||+|++|++.|..+++|..|+++
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhc
Confidence            455555555555555555555555555543

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.4e-10  Score=62.97  Aligned_cols=28  Identities=18%  Similarity=0.329  Sum_probs=12.7

Q ss_pred             hhccCCCCccCCCCcccccchhhhhhhh
Q psy10075        283 RAHYGLKPFKCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       283 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~  310 (373)
                      +.|++++||.|..||+.|...++|..|+
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~   32 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHR   32 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHH
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhC
Confidence            3444444444444444444444444444

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.3e-10  Score=59.19  Aligned_cols=29  Identities=31%  Similarity=0.722  Sum_probs=15.8

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhccC
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      +++||.|..||++|...+.|..|+ +.|++
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~-r~Htg   32 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQ-RVHTG   32 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHH-HGGGC
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhc-cccCC
Confidence            355555555555555555555555 55544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.4e-09  Score=57.13  Aligned_cols=32  Identities=25%  Similarity=0.342  Sum_probs=28.7

Q ss_pred             hccCCCCccCCCCcccccchhhhhhhhhhccC
Q psy10075        284 AHYGLKPFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       284 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +|++++||+|..|++.|..+++|..|++.|.+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            58999999999999999999999999976655

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.83  E-value=1e-09  Score=56.02  Aligned_cols=29  Identities=34%  Similarity=0.739  Sum_probs=22.7

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLK  289 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  289 (373)
                      +||.|++|+++|...+.|..|+ +.|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccCCC
Confidence            5788888888888888888888 7777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=2e-09  Score=57.43  Aligned_cols=31  Identities=29%  Similarity=0.622  Sum_probs=21.7

Q ss_pred             CCCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        257 DEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       257 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      .+++||.|++|++.|.+.++|..|+ +.|++.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~-r~Ht~~   33 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHL-KVHTDT   33 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHH-GGGTSC
T ss_pred             CCCccccCCCCCCcccChHHHHHHc-cccCCc
Confidence            4577777777777777777777777 666654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=9.9e-10  Score=55.29  Aligned_cols=28  Identities=36%  Similarity=0.854  Sum_probs=20.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ++||.|++|+++|...+.|..|+ ++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             CcCccCCCCcCEecccccccccC-CCccC
Confidence            46777777777777777777777 66654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=1.2e-09  Score=58.27  Aligned_cols=30  Identities=30%  Similarity=0.484  Sum_probs=23.0

Q ss_pred             ccCCCCccCCCCcccccchhhhhhhhhhcc
Q psy10075        285 HYGLKPFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       285 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      |++++||+|.+|++.|..+++|..|++.|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            677888888888888888888888875543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2e-09  Score=54.81  Aligned_cols=29  Identities=28%  Similarity=0.699  Sum_probs=22.3

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLK  289 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  289 (373)
                      +||.|++||++|...+.|..|+ ++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~-r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHH-HGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhc-CccCCcC
Confidence            4778888888888888888888 7777764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.1e-09  Score=57.89  Aligned_cols=33  Identities=33%  Similarity=0.783  Sum_probs=28.6

Q ss_pred             eecCC--CCccccChhHHHHhhhhhccCCCCccCCC
Q psy10075        262 FTCEH--CDSKFCKKYDMKMHMSRAHYGLKPFKCSF  295 (373)
Q Consensus       262 ~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  295 (373)
                      |.|+.  |+++|.....|..|+ +.|++++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCCCCEeCCC
Confidence            67876  999999999999999 8899999999874

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=3.6e-09  Score=57.12  Aligned_cols=33  Identities=30%  Similarity=0.661  Sum_probs=28.3

Q ss_pred             CCCCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        256 NDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       256 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +.|++||.|+.|++.|+..++|..|+++.|+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            356999999999999999999999987777653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=3.7e-09  Score=57.64  Aligned_cols=33  Identities=15%  Similarity=0.293  Sum_probs=31.1

Q ss_pred             hhhhccCCCcccCCCCCCCccChhHHHHHHHhh
Q psy10075        309 HVTRIHSNQKYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       309 H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |.+.|.+++||+|+.|+++|..+.+|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            677888999999999999999999999999998

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=1e-08  Score=55.39  Aligned_cols=32  Identities=31%  Similarity=0.710  Sum_probs=27.0

Q ss_pred             CCCCCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        256 NDEDKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       256 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +.+++||.|.+||++|...+.|..|+ +.|.++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~-r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHH-HHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhC-cccCCC
Confidence            35699999999999999999999999 666554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=4e-09  Score=53.01  Aligned_cols=26  Identities=27%  Similarity=0.581  Sum_probs=14.9

Q ss_pred             CCCccCCCCcccccchhhhhhhhhhc
Q psy10075        288 LKPFKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      ++||+|+.|++.|..++.|..|+++|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            35566666666666666666665444

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.8e-09  Score=50.32  Aligned_cols=25  Identities=32%  Similarity=0.765  Sum_probs=18.4

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      +||.|..||++|...+.|..|+ ++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq-riH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ-RIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHH
T ss_pred             CCccCCCCcCeeccCcccccCc-cCC
Confidence            4777777777777777777777 555

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.59  E-value=1.2e-08  Score=51.89  Aligned_cols=26  Identities=23%  Similarity=0.416  Sum_probs=13.6

Q ss_pred             CccCCCCcccccchhhhhhhhhhccC
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h~  315 (373)
                      ||+|++|++.|..++.|..|+++|.+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccC
Confidence            45555555555555555555544433

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2e-08  Score=51.00  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=12.9

Q ss_pred             CccCCCCcccccchhhhhhhhhhcc
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      ||.|++|++.|..++.|..|+++|.
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CEECCcCCCeecchHHhhhhcCccC
Confidence            4555555555555555555554443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=6.5e-09  Score=59.83  Aligned_cols=29  Identities=24%  Similarity=0.616  Sum_probs=13.1

Q ss_pred             ccCCCCccCCC--Ccccccchhhhhhhhhhc
Q psy10075        285 HYGLKPFKCSF--CEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       285 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  313 (373)
                      |++++||+|.+  |++.|..+++|..|+++|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~H   43 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccc
Confidence            44444444444  444444444444444333

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.4e-08  Score=50.01  Aligned_cols=28  Identities=32%  Similarity=0.794  Sum_probs=19.1

Q ss_pred             CCeecCC--CCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEH--CDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||+|+.  |+++|...+.|..|+ +.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcCC
Confidence            4677766  777777777777777 666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=4.8e-08  Score=49.97  Aligned_cols=28  Identities=36%  Similarity=0.944  Sum_probs=20.3

Q ss_pred             CCeecCC--CCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEH--CDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||.|+.  |+++|...+.|..|+ +.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccCCC
Confidence            4677766  777777777777777 667664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=2.3e-08  Score=57.44  Aligned_cols=40  Identities=23%  Similarity=0.375  Sum_probs=24.6

Q ss_pred             ccccceeecCCCCcceecCC--CCccccChhhHhhccccCCCC
Q psy10075         11 SRECAFVSRLDDSYNFICIL--CNYHAENFENIYLHLPSHFEQ   51 (373)
Q Consensus        11 ~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   51 (373)
                      ..|..|+. +.+++||.|+.  |++.|.....|..|++.|+++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            34455554 56666666655  666666666666666666654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=5.5e-08  Score=52.17  Aligned_cols=32  Identities=28%  Similarity=0.551  Sum_probs=28.7

Q ss_pred             ccCCC--CcccccchhhhhhhhhhccCCCcccCC
Q psy10075        291 FKCSF--CEYKCTTKFGLKSHVTRIHSNQKYFCG  322 (373)
Q Consensus       291 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~  322 (373)
                      |.|++  |++.|..++.|.+|+++|.+++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67887  999999999999999998888889996

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.4e-07  Score=48.67  Aligned_cols=29  Identities=34%  Similarity=0.840  Sum_probs=21.4

Q ss_pred             CCeecC--CCCccccChhHHHHhhhhhccCCC
Q psy10075        260 KPFTCE--HCDSKFCKKYDMKMHMSRAHYGLK  289 (373)
Q Consensus       260 ~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~  289 (373)
                      +||.|+  .|+++|+..+.|..|+ +.|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-CcccccC
Confidence            467774  4888888888888888 7777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.1e-07  Score=48.41  Aligned_cols=26  Identities=35%  Similarity=0.674  Sum_probs=14.5

Q ss_pred             CCccCCC--Ccccccchhhhhhhhhhcc
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  314 (373)
                      +||+|++  |++.|..++.|.+|+++|.
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            3555655  6666655556666654443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.3e-07  Score=46.13  Aligned_cols=24  Identities=25%  Similarity=0.577  Sum_probs=14.0

Q ss_pred             cccCCCCCCCccChhHHHHHHHhh
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ||+|..||+.|...++|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            455555666666555566655554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.4e-07  Score=48.17  Aligned_cols=27  Identities=37%  Similarity=0.874  Sum_probs=16.3

Q ss_pred             CCccCCC--CcccccchhhhhhhhhhccC
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +||+|++  |++.|..++.|.+|+++|.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4566665  66666666666666654443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.22  E-value=5.1e-07  Score=46.69  Aligned_cols=28  Identities=36%  Similarity=0.971  Sum_probs=17.9

Q ss_pred             CCCeecCC--CCccccChhHHHHhhhhhccC
Q psy10075        259 DKPFTCEH--CDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       259 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ++||.|+.  |+++|+..+.|..|+ +.|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~-r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHK-KSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHH-GGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHh-hhccC
Confidence            45666665  666666666666666 55544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=3.5e-07  Score=46.09  Aligned_cols=27  Identities=37%  Similarity=0.992  Sum_probs=17.8

Q ss_pred             CCeecCC--CCccccChhHHHHhhhhhccC
Q psy10075        260 KPFTCEH--CDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       260 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      +||.|+.  |+++|.+.+.|..|+ +.|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~-r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHI-RIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHT-HHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhc-CccCC
Confidence            4667755  777777777777776 55553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.2e-07  Score=46.45  Aligned_cols=27  Identities=26%  Similarity=0.583  Sum_probs=16.0

Q ss_pred             CCccCCC--CcccccchhhhhhhhhhccC
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +||.|++  |++.|+..++|..|+++|.+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            4566643  66666666666666654443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=9.7e-07  Score=40.54  Aligned_cols=26  Identities=46%  Similarity=0.921  Sum_probs=19.4

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      |.+|++|++.|+.+..|..|+ +.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            456888888888888888888 66654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=8.9e-07  Score=45.77  Aligned_cols=25  Identities=20%  Similarity=0.568  Sum_probs=13.4

Q ss_pred             CCccCCC--Ccccccchhhhhhhhhhc
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~  313 (373)
                      +||.|.+  |++.|+..++|.+|+++|
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            4555555  555555555555555433

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=6.8e-07  Score=44.48  Aligned_cols=21  Identities=33%  Similarity=1.001  Sum_probs=11.6

Q ss_pred             CeecCC--CCccccChhHHHHhh
Q psy10075        261 PFTCEH--CDSKFCKKYDMKMHM  281 (373)
Q Consensus       261 ~~~C~~--C~~~f~~~~~L~~H~  281 (373)
                      ||.|+.  ||++|++.++|..|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~   24 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHI   24 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHH
Confidence            455544  555555555555555

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=8.2e-07  Score=44.18  Aligned_cols=25  Identities=36%  Similarity=0.786  Sum_probs=15.2

Q ss_pred             CCccCCC--Ccccccchhhhhhhhhhc
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~  313 (373)
                      +||.|++  |++.|+..++|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3566666  666666666666666443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=6.7e-07  Score=45.04  Aligned_cols=26  Identities=19%  Similarity=0.621  Sum_probs=16.4

Q ss_pred             CCccCCC--Ccccccchhhhhhhhhhcc
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  314 (373)
                      +||+|.+  |++.|...+.|..|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            4666666  6666666666666665443

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.1e-06  Score=41.48  Aligned_cols=23  Identities=30%  Similarity=0.701  Sum_probs=10.0

Q ss_pred             CCccCCCCcccccchhhhhhhhh
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVT  311 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~  311 (373)
                      +||.|++|+.+|..+..+..|++
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvr   24 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVR   24 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHH
T ss_pred             CCcccchHHHHhhccccceEeee
Confidence            34444444444444444444443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.2e-06  Score=39.43  Aligned_cols=25  Identities=32%  Similarity=0.755  Sum_probs=11.4

Q ss_pred             CCccCCCCcccccchhhhhhhhhhc
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      +||+|..|.+.-.+.++|..|+++|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~h   26 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSH   26 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTC
T ss_pred             CcceeeecccccCCchheEEeeecc
Confidence            3444444444444444444444333

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=8.2e-06  Score=38.83  Aligned_cols=26  Identities=38%  Similarity=0.910  Sum_probs=16.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      ++||.|.+||+.|..+.+..+|. .+|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~-kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHT-KIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-GGG
T ss_pred             CCCcccchhhhhhhcchhhhhhh-hhc
Confidence            35666666666666666666666 444

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=4.8e-06  Score=38.19  Aligned_cols=26  Identities=15%  Similarity=0.319  Sum_probs=17.9

Q ss_pred             ceecCCCCccccChhhHhhccccCCC
Q psy10075         25 NFICILCNYHAENFENIYLHLPSHFE   50 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~   50 (373)
                      |.+|++|++-|+.++.|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777776653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1e-05  Score=39.96  Aligned_cols=31  Identities=35%  Similarity=0.723  Sum_probs=25.5

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCCCCc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPF  291 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  291 (373)
                      +...|..||+.|.....|.+|. ..|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhk-lshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHK-LSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHG-GGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhh-cccCCCCCC
Confidence            3467888888888888888888 888888887

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=7.8e-06  Score=38.89  Aligned_cols=26  Identities=31%  Similarity=0.467  Sum_probs=16.8

Q ss_pred             CCCccCCCCcccccchhhhhhhhhhc
Q psy10075        288 LKPFKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      ++||.|.+||+.|..+....+|.+.|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            45677777777776666666666443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.6e-05  Score=37.42  Aligned_cols=28  Identities=29%  Similarity=0.765  Sum_probs=22.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ++||+|..|.+.-.+.+.|..|+ +.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhl-r~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHL-RSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CCcceeeecccccCCchheEEee-ecccC
Confidence            46888888888888888888888 77765

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=38.84  Aligned_cols=28  Identities=39%  Similarity=0.901  Sum_probs=23.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ++||.|++|+..|..+..+..|. +.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhv-rshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHV-RSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHH-HHHSC
T ss_pred             CCCcccchHHHHhhccccceEee-ecccC
Confidence            57899999999999999999998 66654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=38.40  Aligned_cols=25  Identities=28%  Similarity=0.885  Sum_probs=10.7

Q ss_pred             CccCCCCcccccchhhhhhhhhhcc
Q psy10075        290 PFKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      ||+|.+|.++-.+.++|..|+++.|
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            3444444444444444444444333

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.3e-05  Score=39.63  Aligned_cols=31  Identities=19%  Similarity=0.314  Sum_probs=20.9

Q ss_pred             cceecCCCCccccChhhHhhccccCCCCCcc
Q psy10075         24 YNFICILCNYHAENFENIYLHLPSHFEQKLF   54 (373)
Q Consensus        24 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   54 (373)
                      +...|.+||+.|.+.-.|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3456777777777776777776677666665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=2.5e-05  Score=36.57  Aligned_cols=26  Identities=27%  Similarity=0.579  Sum_probs=19.7

Q ss_pred             eecCCCCccccChhHHHHhhhhhccCC
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      ..|..||+.|...+.|.+|. ..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccCC
Confidence            56778888888888888887 777664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.5e-05  Score=38.57  Aligned_cols=15  Identities=13%  Similarity=0.647  Sum_probs=6.1

Q ss_pred             CCccccChhHHHHhh
Q psy10075        267 CDSKFCKKYDMKMHM  281 (373)
Q Consensus       267 C~~~f~~~~~L~~H~  281 (373)
                      |+++|...+.|+.|+
T Consensus        10 C~K~YtdPSSLRKH~   24 (29)
T d2glia5          10 CTKRYTDPSSLRKHV   24 (29)
T ss_dssp             TCCEESSHHHHHHHH
T ss_pred             CCcccCCHHHHHHHH
Confidence            334444444444443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=3.6e-05  Score=36.61  Aligned_cols=29  Identities=21%  Similarity=0.526  Sum_probs=24.3

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +||.|..|...-...++|..|++..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            57889999888888899999987778665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=3e-05  Score=37.48  Aligned_cols=24  Identities=38%  Similarity=0.674  Sum_probs=11.5

Q ss_pred             ccCCC--CCCCccChhHHHHHHHhhc
Q psy10075        319 YFCGS--CNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       319 ~~C~~--C~~~f~~~~~l~~H~~~~H  342 (373)
                      |.|.+  |++++..++.|++|++++|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhC
Confidence            44444  4445555555555554444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.42  E-value=4.6e-05  Score=34.45  Aligned_cols=23  Identities=30%  Similarity=0.621  Sum_probs=18.7

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |+|.+|+++|.-++.|..|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            67888888888888888887776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.31  E-value=9.1e-05  Score=36.05  Aligned_cols=27  Identities=26%  Similarity=0.703  Sum_probs=15.8

Q ss_pred             CeecCCCCccccChhHHHHhhhhhccC
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ||.|.+|++.|+....|.+|....|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            456666666666666666665555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=5.4e-05  Score=39.69  Aligned_cols=25  Identities=28%  Similarity=0.741  Sum_probs=19.4

Q ss_pred             cCCCCccCCCCcccccchhhhhhhh
Q psy10075        286 YGLKPFKCSFCEYKCTTKFGLKSHV  310 (373)
Q Consensus       286 ~~~~~~~C~~C~~~f~~~~~l~~H~  310 (373)
                      ++.+||.|.+|++.|..+.++.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            3567888888888888888888776

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00013  Score=34.54  Aligned_cols=26  Identities=31%  Similarity=0.635  Sum_probs=18.9

Q ss_pred             eecCCCCccccChhHHHHhhhhhccCC
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      |.|+.||......+.|..|+ +.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHI-RsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHI-RTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSSC
T ss_pred             ccccccCcccCCHHHHHHHH-HHhcCC
Confidence            67777777777777777777 667665

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.25  E-value=7.8e-05  Score=36.29  Aligned_cols=27  Identities=30%  Similarity=0.557  Sum_probs=15.2

Q ss_pred             ccccCcCcccccchHHHHHHhhhhhcc
Q psy10075         53 LFSCDLCEYQTNTKIYIRRHMLKIHLR   79 (373)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   79 (373)
                      ||.|..|++.|..+.-|.+|.++.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            455555666666555555565555543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=9.8e-05  Score=34.93  Aligned_cols=24  Identities=33%  Similarity=0.807  Sum_probs=19.4

Q ss_pred             cccCCCCCCCccChhHHHHHHHhh
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      ||.|..|+++|.++.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            477888888888888888888754

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00027  Score=33.44  Aligned_cols=23  Identities=26%  Similarity=0.697  Sum_probs=18.6

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      |.|+.|+.....++.|++||++|
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsH   24 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTH   24 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             ccccccCcccCCHHHHHHHHHHh
Confidence            67888888888888888888877

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00023  Score=33.67  Aligned_cols=21  Identities=33%  Similarity=0.795  Sum_probs=12.9

Q ss_pred             CeecCCCCccccChhHHHHhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      ||.|..|+.+|.+..+|..||
T Consensus         1 py~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhh
Confidence            456666666666666666666

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0001  Score=34.35  Aligned_cols=23  Identities=35%  Similarity=0.889  Sum_probs=13.0

Q ss_pred             CCccCCCCcccccchhhhhhhhh
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVT  311 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~  311 (373)
                      +||+|..|.+.-.+.++|..|++
T Consensus         2 kp~kck~cdyaaadsssl~kh~r   24 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLR   24 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccccccchhcchhhHhhhhh
Confidence            45555555555555555555553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00024  Score=33.49  Aligned_cols=29  Identities=31%  Similarity=0.834  Sum_probs=22.5

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +..|.|..|..+|.....|+.|| ..|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hm-vshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHM-VSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-HHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeee-ecccCC
Confidence            45678888888888888888888 777764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00025  Score=32.96  Aligned_cols=26  Identities=31%  Similarity=0.752  Sum_probs=21.5

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhcc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      +||+|..|++.-...+.|..|+ ++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~-rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHL-RIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-HHSC
T ss_pred             CCcccccccchhcchhhHhhhh-hccc
Confidence            6888888888888888888888 6664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00014  Score=34.55  Aligned_cols=20  Identities=25%  Similarity=0.584  Sum_probs=7.9

Q ss_pred             eecCCCCccccChhHHHHhh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~  281 (373)
                      |+|..|....++.++|..|+
T Consensus         3 FkC~~CsFDtkq~SnL~kH~   22 (29)
T d1x5wa2           3 FKCNYCSFDTKQPSNLSKHM   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHH
T ss_pred             cccceecccccCcchHHHHH
Confidence            33333333333333333333

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00027  Score=33.00  Aligned_cols=25  Identities=16%  Similarity=0.234  Sum_probs=17.2

Q ss_pred             eecCCCCccccChhhHhhccccCCC
Q psy10075         26 FICILCNYHAENFENIYLHLPSHFE   50 (373)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~H~~~h~~   50 (373)
                      ..|.+||+.|...+.|.+|+..|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4577777777777777777766665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00036  Score=33.09  Aligned_cols=28  Identities=29%  Similarity=0.905  Sum_probs=23.2

Q ss_pred             CCccCCCCcccccchhhhhhhhhhccCC
Q psy10075        289 KPFKCSFCEYKCTTKFGLKSHVTRIHSN  316 (373)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  316 (373)
                      +||+|.+|.......++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5788999988888888999988877764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.88  E-value=0.0005  Score=35.88  Aligned_cols=28  Identities=25%  Similarity=0.547  Sum_probs=17.4

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +.|.|.+|++.|.+...|--|| +.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCCS
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcch
Confidence            4566666666666666666666 555433

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00035  Score=33.95  Aligned_cols=26  Identities=38%  Similarity=0.858  Sum_probs=13.2

Q ss_pred             CeecCC--CCccccChhHHHHhhhhhcc
Q psy10075        261 PFTCEH--CDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       261 ~~~C~~--C~~~f~~~~~L~~H~~~~H~  286 (373)
                      ||.|+.  |++.|++.+.-..|+.+.|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455544  55555555555555444443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.79  E-value=0.00065  Score=30.59  Aligned_cols=19  Identities=26%  Similarity=0.674  Sum_probs=8.4

Q ss_pred             ecCCCCccccChhHHHHhh
Q psy10075        263 TCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       263 ~C~~C~~~f~~~~~L~~H~  281 (373)
                      +|..|.++|-.++.|.+|+
T Consensus         2 kcglcersfveksalsrhq   20 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQ   20 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHG
T ss_pred             cccchHHHHHHHHHHHHHH
Confidence            3444444444444444444

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.00048  Score=31.03  Aligned_cols=22  Identities=27%  Similarity=0.555  Sum_probs=11.1

Q ss_pred             ccccCcCcccccchHHHHHHhh
Q psy10075         53 LFSCDLCEYQTNTKIYIRRHML   74 (373)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~   74 (373)
                      ||+|..|...|..+.+|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4455555555555555555543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00062  Score=35.60  Aligned_cols=24  Identities=25%  Similarity=0.646  Sum_probs=22.1

Q ss_pred             CCCCeecCCCCccccChhHHHHhh
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      +.+||.|.+|++.|.....+.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            578999999999999999999997

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.72  E-value=0.0005  Score=35.90  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=21.1

Q ss_pred             cccCCCCCCCccChhHHHHHHHhhc
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      .|+|.+|++.|.+..+|--|++.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            4889999999999888999988873

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.00054  Score=30.86  Aligned_cols=22  Identities=32%  Similarity=0.617  Sum_probs=12.6

Q ss_pred             cccCCCCCCCccChhHHHHHHH
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQ  339 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~  339 (373)
                      ||+|..|..+|..+.+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4556666666666655655543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.00067  Score=31.12  Aligned_cols=25  Identities=44%  Similarity=0.842  Sum_probs=16.4

Q ss_pred             ecCCCCccccChhHHHHhhhhhccCC
Q psy10075        263 TCEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       263 ~C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +|+.|.++|.++..|..|- +.|+++
T Consensus         2 qcp~c~k~f~skyylkvhn-r~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHN-RKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHH-HHHSSC
T ss_pred             cCcchHHHHHHhHhhhhcc-ccccCC
Confidence            4666777777766666666 556654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.63  E-value=0.00038  Score=32.77  Aligned_cols=26  Identities=27%  Similarity=0.465  Sum_probs=14.5

Q ss_pred             ceecCCCCccccChhhHhhccccCCC
Q psy10075         25 NFICILCNYHAENFENIYLHLPSHFE   50 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~   50 (373)
                      .|.|.+|..+|..+-.|..|+-+|.+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            45555555555555555555555543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00047  Score=35.64  Aligned_cols=27  Identities=26%  Similarity=0.495  Sum_probs=18.5

Q ss_pred             CCcceec--CCCCccccChhhHhhccccC
Q psy10075         22 DSYNFIC--ILCNYHAENFENIYLHLPSH   48 (373)
Q Consensus        22 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h   48 (373)
                      +++||.|  +-|++.|.+.+.|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            5677777  44777777777777775544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.46  E-value=0.0011  Score=30.00  Aligned_cols=24  Identities=29%  Similarity=0.700  Sum_probs=15.9

Q ss_pred             eecCCCCccccChhHHHHhhhhhc
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      |.|+.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567777777777777777665544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.38  E-value=0.0012  Score=30.30  Aligned_cols=25  Identities=44%  Similarity=0.816  Sum_probs=13.3

Q ss_pred             ccCccccccCCchHHHHHHhhhcCCC
Q psy10075         84 ECSLCDSTFSDNMDLKKHIQRKHTND  109 (373)
Q Consensus        84 ~C~~C~~~f~~~~~l~~H~~~~h~~~  109 (373)
                      +|+.|.+.|.++..|..| .+.|+++
T Consensus         2 qcp~c~k~f~skyylkvh-nr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVH-NRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHH-HHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhc-cccccCC
Confidence            355555555555555555 3445443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.28  E-value=0.00096  Score=31.36  Aligned_cols=14  Identities=36%  Similarity=0.750  Sum_probs=5.3

Q ss_pred             CCccccChhHHHHh
Q psy10075        267 CDSKFCKKYDMKMH  280 (373)
Q Consensus       267 C~~~f~~~~~L~~H  280 (373)
                      |++.|+..+.|.+|
T Consensus        11 cdk~fs~ps~lkrh   24 (29)
T d2j7ja2          11 CDKRFSLPSRLKRH   24 (29)
T ss_dssp             CCCEESSHHHHHHH
T ss_pred             ccccccCHHHHhhh
Confidence            33333333333333

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0014  Score=30.48  Aligned_cols=25  Identities=20%  Similarity=0.368  Sum_probs=19.6

Q ss_pred             ceecCCCCccccChhhHhhccccCC
Q psy10075         25 NFICILCNYHAENFENIYLHLPSHF   49 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~   49 (373)
                      |-+|+.|.++.+++++|..|.+.|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5678888888888888888877764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0013  Score=31.94  Aligned_cols=27  Identities=30%  Similarity=0.595  Sum_probs=17.7

Q ss_pred             CCccCCC--CcccccchhhhhhhhhhccC
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +||.|.+  |.+.|++.++-..|..+.|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677776  77777777777777644443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.10  E-value=0.0013  Score=29.72  Aligned_cols=23  Identities=35%  Similarity=0.664  Sum_probs=13.1

Q ss_pred             ccCCCCcccccchhhhhhhhhhc
Q psy10075        291 FKCSFCEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~~  313 (373)
                      |.|+.|-+.|+.+.++..|++..
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            45666666666666666555443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.86  E-value=0.0029  Score=29.22  Aligned_cols=21  Identities=29%  Similarity=0.752  Sum_probs=10.9

Q ss_pred             CeecCCCCccccChhHHHHhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      ||.|..||+.|-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            345555555555555555554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.85  E-value=0.0034  Score=28.96  Aligned_cols=22  Identities=27%  Similarity=0.528  Sum_probs=18.1

Q ss_pred             cccCCCCCCCccChhHHHHHHH
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQ  339 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~  339 (373)
                      ||+|..||+.+..+.+|.+|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4788888888888888888854

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.85  E-value=0.0035  Score=29.41  Aligned_cols=25  Identities=24%  Similarity=0.539  Sum_probs=16.9

Q ss_pred             CCccCCC--Ccccccchhhhhhhhhhc
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRI  313 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~  313 (373)
                      .||+|+.  |++.|+..+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3677765  777777777777776443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0045  Score=28.66  Aligned_cols=24  Identities=38%  Similarity=0.976  Sum_probs=14.0

Q ss_pred             eecCCCCccccChhHHHHhhhhhc
Q psy10075        262 FTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      |.|+.|+-....++.|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            556666666666666666654444

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0028  Score=29.37  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=15.3

Q ss_pred             ccCCCCcccccchhhhhhhhhhcc
Q psy10075        291 FKCSFCEYKCTTKFGLKSHVTRIH  314 (373)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~~h  314 (373)
                      |+|+.|+..-..+++|+.|++.-|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            566666666666666666665444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.0049  Score=28.65  Aligned_cols=23  Identities=30%  Similarity=0.687  Sum_probs=17.2

Q ss_pred             ccCCCCCCCccChhHHHHHHHhh
Q psy10075        319 YFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      -+|+.|.++.++++.|+.|.+.|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35777777777777787777766

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.0099  Score=32.17  Aligned_cols=24  Identities=25%  Similarity=0.396  Sum_probs=21.5

Q ss_pred             cccCCCCCCCccChhHHHHHHHhh
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~  341 (373)
                      .|.|.+|++.|+....|++|..+|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            488999999999999999998876

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.64  E-value=0.012  Score=27.67  Aligned_cols=26  Identities=31%  Similarity=0.751  Sum_probs=13.0

Q ss_pred             CeecCC--CCccccChhHHHHhhhhhccC
Q psy10075        261 PFTCEH--CDSKFCKKYDMKMHMSRAHYG  287 (373)
Q Consensus       261 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~  287 (373)
                      ||.|..  |.+.|.+...|.+|. ..|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs-~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHS-LTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHH-HHHHT
T ss_pred             CcCcccccccccchhhhhhhhhh-ccccC
Confidence            444433  555555555555555 44443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.014  Score=29.97  Aligned_cols=23  Identities=35%  Similarity=0.869  Sum_probs=16.0

Q ss_pred             CCCeec--CCCCccccChhHHHHhh
Q psy10075        259 DKPFTC--EHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       259 ~~~~~C--~~C~~~f~~~~~L~~H~  281 (373)
                      ++||.|  +-|+.+|.+...|..|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk   28 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHK   28 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhh
Confidence            667777  44777777777777776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.55  E-value=0.015  Score=28.39  Aligned_cols=20  Identities=25%  Similarity=0.607  Sum_probs=12.2

Q ss_pred             eecCCCCccccChhHHHHhh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~  281 (373)
                      |.|+.||-.|+..+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            55666666666666666665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.35  E-value=0.013  Score=29.02  Aligned_cols=21  Identities=29%  Similarity=0.784  Sum_probs=17.2

Q ss_pred             CeecCCCCccccChhHHHHhh
Q psy10075        261 PFTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       261 ~~~C~~C~~~f~~~~~L~~H~  281 (373)
                      .|.|..||++|.....+.+|.
T Consensus         4 afvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHh
Confidence            478888888888888888886

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.014  Score=34.64  Aligned_cols=42  Identities=19%  Similarity=0.435  Sum_probs=27.0

Q ss_pred             ecCCCCcceecCCCCccccChhhHhhccccCCCCCccccCcCccc
Q psy10075         18 SRLDDSYNFICILCNYHAENFENIYLHLPSHFEQKLFSCDLCEYQ   62 (373)
Q Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   62 (373)
                      +...+-..|+|+.|+++|+..+++.. +  ......|.|..|+-.
T Consensus         7 rd~~~~~~y~Cp~C~~~ys~Lda~~L-~--d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           7 RDSTNRASFKCPVCSSTFTDLEANQL-F--DPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHHH-E--ETTTTEEBCSSSCCB
T ss_pred             hccccCCceECCCCCCCcchhhHHHh-c--CcCCCeEEecCCCCE
Confidence            34445666888888888877776644 2  223456788877643

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.13  E-value=0.013  Score=27.60  Aligned_cols=27  Identities=33%  Similarity=0.516  Sum_probs=16.9

Q ss_pred             CCccCCC--CcccccchhhhhhhhhhccC
Q psy10075        289 KPFKCSF--CEYKCTTKFGLKSHVTRIHS  315 (373)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  315 (373)
                      +||.|..  |.+.|.+...|.+|..+|.+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            3566655  77777777777777655443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.09  E-value=0.012  Score=28.75  Aligned_cols=24  Identities=17%  Similarity=0.414  Sum_probs=19.4

Q ss_pred             CcceecCCCCccccChhhHhhccc
Q psy10075         23 SYNFICILCNYHAENFENIYLHLP   46 (373)
Q Consensus        23 ~~~~~C~~C~~~f~~~~~l~~H~~   46 (373)
                      -..|.|..||..|++...|+.|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            346889999999999998988853

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.015  Score=28.74  Aligned_cols=26  Identities=15%  Similarity=0.280  Sum_probs=20.4

Q ss_pred             ceecCCCCccccChhhHhhccccCCC
Q psy10075         25 NFICILCNYHAENFENIYLHLPSHFE   50 (373)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~H~~~h~~   50 (373)
                      .|.|..|+++|..+..+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            57888888888888888888766554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.05  Score=25.49  Aligned_cols=25  Identities=24%  Similarity=0.571  Sum_probs=16.6

Q ss_pred             ccccCcCcccccchHHHHHHhhhhh
Q psy10075         53 LFSCDLCEYQTNTKIYIRRHMLKIH   77 (373)
Q Consensus        53 ~~~C~~C~~~f~~~~~l~~H~~~~h   77 (373)
                      .|.|.+|+++..+...+.-|+...|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            3667777777777777777755544

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.89  E-value=0.035  Score=28.75  Aligned_cols=26  Identities=31%  Similarity=0.455  Sum_probs=15.1

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY  298 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~  298 (373)
                      ++.|+|++||...              .++.|-+|++|+.
T Consensus         3 ~~~~vC~vCGyi~--------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH--------------KGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE--------------ESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCEe--------------eCCCCCcCCCCCC
Confidence            4456777777432              2345556777764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.85  E-value=0.03  Score=30.23  Aligned_cols=26  Identities=19%  Similarity=0.409  Sum_probs=19.0

Q ss_pred             CCeecCCCCccccChhHHHHhhhhhcc
Q psy10075        260 KPFTCEHCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       260 ~~~~C~~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      ..|.|..|++.|.....|++|- ..|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HE-AQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHE-AQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH-HHHT
T ss_pred             ceeeccccccccCCHHHHhHhH-HhcC
Confidence            3467888888888888888887 5553

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.051  Score=25.48  Aligned_cols=17  Identities=24%  Similarity=0.411  Sum_probs=6.5

Q ss_pred             CCCCCCCccChhHHHHH
Q psy10075        321 CGSCNFSCTSNTDLLEH  337 (373)
Q Consensus       321 C~~C~~~f~~~~~l~~H  337 (373)
                      |..||++..+...++-|
T Consensus         5 c~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           5 CHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CSSSCCCCSSHHHHHHH
T ss_pred             chhHHHHHhhccCceEE
Confidence            33333333333333333

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.17  E-value=0.054  Score=26.79  Aligned_cols=27  Identities=15%  Similarity=0.511  Sum_probs=18.2

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      +..|+|.+|.+++..-+++-+|....|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            445777777777777777777764444

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.08  E-value=0.047  Score=28.47  Aligned_cols=26  Identities=23%  Similarity=0.521  Sum_probs=14.6

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEY  298 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~  298 (373)
                      ++.|+|++||..+              .++.|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i~--------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTA--------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEE--------------ESCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEe--------------cCCCCCcCCCCCC
Confidence            3456677776443              2345556666654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.08  E-value=0.069  Score=24.97  Aligned_cols=26  Identities=23%  Similarity=0.639  Sum_probs=20.0

Q ss_pred             ccCC--CCCCCccChhHHHHHHHhhccc
Q psy10075        319 YFCG--SCNFSCTSNTDLLEHVQTNHII  344 (373)
Q Consensus       319 ~~C~--~C~~~f~~~~~l~~H~~~~H~~  344 (373)
                      |.|.  -|+..|.+++++..|....|++
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn~   30 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHNI   30 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhccC
Confidence            5565  4888888888888888887764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.034  Score=33.52  Aligned_cols=26  Identities=19%  Similarity=0.234  Sum_probs=19.9

Q ss_pred             CCcceecCCCCccccChhhHhhcccc
Q psy10075         22 DSYNFICILCNYHAENFENIYLHLPS   47 (373)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~~   47 (373)
                      +.+.|-|..|++.|.+...|..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            45668888888888888888888654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.85  E-value=0.081  Score=31.19  Aligned_cols=38  Identities=24%  Similarity=0.564  Sum_probs=21.8

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhccCCCCccCCCCcccc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHYGLKPFKCSFCEYKC  300 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~C~~~f  300 (373)
                      ...|+|+.|+++|+....+..    .-.....|.|.+|+-..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L----~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL----FDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH----EETTTTEEBCSSSCCBC
T ss_pred             CCceECCCCCCCcchhhHHHh----cCcCCCeEEecCCCCEE
Confidence            445777777777765444332    23334557777776543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.63  E-value=0.07  Score=26.38  Aligned_cols=25  Identities=28%  Similarity=0.517  Sum_probs=14.7

Q ss_pred             cccCCCCCCCccChhHHHHHHHhhc
Q psy10075        318 KYFCGSCNFSCTSNTDLLEHVQTNH  342 (373)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~H  342 (373)
                      .|+|.+|.+.+..-+++-.|..+.|
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhc
Confidence            3566666666666666666655544

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.33  E-value=0.19  Score=23.96  Aligned_cols=28  Identities=25%  Similarity=0.748  Sum_probs=20.8

Q ss_pred             CCeecC--CCCccccChhHHHHhhhhhccCC
Q psy10075        260 KPFTCE--HCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       260 ~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      +.|+|.  .|+-.|.....|..|+ -.|+++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHL-ckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHL-SKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHH-HHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHh-hhhcCC
Confidence            457774  4888888888888888 777664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.31  E-value=0.17  Score=25.24  Aligned_cols=24  Identities=33%  Similarity=0.551  Sum_probs=18.0

Q ss_pred             cCCCCccccChhHHHHhhhhhccCC
Q psy10075        264 CEHCDSKFCKKYDMKMHMSRAHYGL  288 (373)
Q Consensus       264 C~~C~~~f~~~~~L~~H~~~~H~~~  288 (373)
                      |+.=++.|.....|..|| +.|+++
T Consensus        10 C~R~~~pf~a~YkLv~H~-R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHM-RRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHT-HHHHCC
T ss_pred             CCCCCCcchhHHHHHHHH-hhcCCC
Confidence            445556788888888888 788764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.27  E-value=0.27  Score=26.28  Aligned_cols=28  Identities=21%  Similarity=0.547  Sum_probs=22.9

Q ss_pred             CCCCeecCCCCccccChhHHHHhhhhhc
Q psy10075        258 EDKPFTCEHCDSKFCKKYDMKMHMSRAH  285 (373)
Q Consensus       258 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H  285 (373)
                      .+.|-.|++|+....+..+|.+|+-..|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3678889999999999999999885555

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.13  E-value=0.15  Score=27.34  Aligned_cols=25  Identities=20%  Similarity=0.305  Sum_probs=18.8

Q ss_pred             CCcceecCCCCccccChhhHhhccc
Q psy10075         22 DSYNFICILCNYHAENFENIYLHLP   46 (373)
Q Consensus        22 ~~~~~~C~~C~~~f~~~~~l~~H~~   46 (373)
                      ++.|-.|++|+.+.....+|.+|+.
T Consensus        21 s~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHH
Confidence            5667778888888877777777765

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.91  E-value=0.074  Score=31.97  Aligned_cols=20  Identities=25%  Similarity=0.605  Sum_probs=8.6

Q ss_pred             eecCCCCccccChhHHHHhh
Q psy10075        262 FTCEHCDSKFCKKYDMKMHM  281 (373)
Q Consensus       262 ~~C~~C~~~f~~~~~L~~H~  281 (373)
                      |.|..|++.|.+...|..|+
T Consensus        16 fYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHT
T ss_pred             EecccccCccCCHHHHHHHH
Confidence            34444444444444444443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.65  E-value=0.2  Score=23.17  Aligned_cols=18  Identities=22%  Similarity=0.488  Sum_probs=11.2

Q ss_pred             CCCCccChhHHHHHHHhh
Q psy10075        324 CNFSCTSNTDLLEHVQTN  341 (373)
Q Consensus       324 C~~~f~~~~~l~~H~~~~  341 (373)
                      |++.|.+.+++++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            566666666666666554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.42  E-value=0.18  Score=29.23  Aligned_cols=27  Identities=30%  Similarity=0.772  Sum_probs=17.3

Q ss_pred             CCCeecCCCCccccChhHHHHhhhhhcc
Q psy10075        259 DKPFTCEHCDSKFCKKYDMKMHMSRAHY  286 (373)
Q Consensus       259 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~  286 (373)
                      ...|+|..|...|.....|..|+ ..|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl-~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHL-NIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHH-Hhcc
Confidence            34566666666666666666666 5554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.25  E-value=0.49  Score=27.33  Aligned_cols=24  Identities=25%  Similarity=0.589  Sum_probs=15.3

Q ss_pred             CCCccCCCCcccccchhhhhhhhh
Q psy10075        288 LKPFKCSFCEYKCTTKFGLKSHVT  311 (373)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~  311 (373)
                      ...|+|..|...|.+...|..|+.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~   39 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLN   39 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHH
Confidence            445666666666666666666663

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.50  E-value=0.94  Score=20.95  Aligned_cols=21  Identities=19%  Similarity=0.276  Sum_probs=14.9

Q ss_pred             ccccccccCHHHHHHHHhhhc
Q psy10075        145 TICESTYLTKVELKNHILKIH  165 (373)
Q Consensus       145 ~~C~~~f~~~~~l~~H~~~~h  165 (373)
                      +.|++.|+++..|..|.+-.|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            458888888888888764333