Psyllid ID: psy10080

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MVGDKSTDDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccEEccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHcccccccccccccHHHHcHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mvgdkstddvfgeqdtgaqnsqdddekmlvpynvdkegkkttwacpmcrKIYAFKYNLMRHLRvecgkepsqmclfcsykckhktdimhhmrlkhkefkie
Flexible Loop (DISEMBL)
mvgdkstddvfgeqdtgaqnsqdddekmLVPYNvdkegkkttwacpmcRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMrlkhkefkie
Low Complexity Region (SEG)
MVGDKSTDDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE
Disordered region (IsUnstruct)
*****************************VPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR*********
Disordered Region (DISOPRED)
********************************************CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHM*L*H******
Disordered Region (DISEMBL)
**********************DDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE
Disordered Region (DISPRO)
****************************************TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVGDKSTDDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	yes	N/A	0.564	0.072	0.482	2e-10
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.574	0.059	0.423	1e-06
P42283	891	Longitudinals lacking pro	no	N/A	0.554	0.062	0.421	2e-06
P37275	1124	Zinc finger E-box-binding	yes	N/A	0.821	0.073	0.329	0.0002
Q62947	1109	Zinc finger E-box-binding	no	N/A	0.821	0.074	0.310	0.0002
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.386	0.044	0.475	0.0002
Q60542	1043	Zinc finger E-box-binding	N/A	N/A	0.821	0.079	0.295	0.0002
P36197	1114	Zinc finger E-box-binding	yes	N/A	0.821	0.074	0.329	0.0002
Q64318	1117	Zinc finger E-box-binding	yes	N/A	0.821	0.074	0.295	0.0003
Q9NPA5	681	Zinc finger protein 64 ho	no	N/A	0.514	0.076	0.339	0.0004

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 687 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 744

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 40  KTTWACPMCRKIYAFKYNLMRHLRVECG-KEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
           ++ + C  C K Y +K  L RH  VECG KEP   C +CSYK K + ++  H+R  H E
Sbjct: 900 ESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHHPE 958

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 43  WACPMCRKIYAFKYNLMRHLRVECG-KEPSQMCLFCSYKCKHKTDIMHHMRLKHKEF 98
           + C  C K Y +K  L RH  VECG KEPS  C +C YK K + ++  H+R  H + 
Sbjct: 791 YECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHVRKHHTDL 847

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|P37275|ZEB1_HUMAN Zinc finger E-box-binding homeobox 1 OS=Homo sapiens GN=ZEB1 PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 14  QDT---GAQNSQD-DDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKE 69
           QDT   G  N +D +D     P    ++ +   +AC +C KI+    +L+RH     GK 
Sbjct: 871 QDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKR 930

Query: 70  PSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
           P + C  C    KHK  ++ HMRL   E
Sbjct: 931 PHE-CGICKKAFKHKHHLIEHMRLHSGE 957

Acts as a transcriptional repressor. Inhibits interleukin-2 (IL-2) gene expression. Enhances or represses the promoter activity of the ATP1A1 gene depending on the quantity of cDNA and on the cell type. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Homo sapiens (taxid: 9606)

>sp|Q62947|ZEB1_RAT Zinc finger E-box-binding homeobox 1 OS=Rattus norvegicus GN=Zeb1 PE=2 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 14  QDT---GAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEP 70
           QDT   G      +D     P    ++ +   +AC +C KI+    +L+RH     GK P
Sbjct: 849 QDTSSEGVSVEDQNDSDCTPPKKKTRKAENGMYACDLCDKIFQKSSSLLRHKYEHTGKRP 908

Query: 71  SQMCLFCSYKCKHKTDIMHHMRLKHKE 97
            + C  C    KHK  ++ HMRL   E
Sbjct: 909 HE-CGICRKAFKHKHHLIEHMRLHSGE 934

Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Rattus norvegicus (taxid: 10116)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 43  WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK 82
           +AC +C K Y  K +L RH   ECG EP+  C  C +KCK
Sbjct: 709 YACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q60542|ZEB1_MESAU Zinc finger E-box-binding homeobox 1 OS=Mesocricetus auratus GN=ZEB1 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 14  QDTGAQN----SQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKE 69
           QDT ++        +D     P    ++ +   +AC +C KI+    +L+RH     GK 
Sbjct: 794 QDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKR 853

Query: 70  PSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
           P + C  C    KHK  ++ HMRL   E
Sbjct: 854 PHE-CGICKKAFKHKHHLIEHMRLHSGE 880

Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Mesocricetus auratus (taxid: 10036)

>sp|P36197|ZEB1_CHICK Zinc finger E-box-binding homeobox 1 OS=Gallus gallus GN=ZEB1 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 14  QDT---GAQNSQD-DDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKE 69
           QDT   G  N +D +D     P    ++ +   +AC +C KI+    +L+RH     GK 
Sbjct: 871 QDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKR 930

Query: 70  PSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
           P + C  C    KHK  ++ HMRL   E
Sbjct: 931 PHE-CGICKKAFKHKHHLIEHMRLHSGE 957

Acts as a transcriptional repressor. Positively regulates neuronal differentiation. Represses transcription by binding to the E box-containing promoter (By similarity). Binds to delta 1-crystallin enhancer core and represses lens-specific transcription. It binds as well many other non-lens specific DNA sequences.

Gallus gallus (taxid: 9031)

>sp|Q64318|ZEB1_MOUSE Zinc finger E-box-binding homeobox 1 OS=Mus musculus GN=Zeb1 PE=1 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 14  QDTGAQN----SQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKE 69
           QDT ++        +D     P    ++ +   +AC +C KI+    +L+RH     GK 
Sbjct: 849 QDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKR 908

Query: 70  PSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
           P + C  C    KHK  ++ HMRL   E
Sbjct: 909 PHE-CGICRKAFKHKHHLIEHMRLHSGE 935

Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1 (By similarity). Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Mus musculus (taxid: 10090)

>sp|Q9NPA5|ZF64A_HUMAN Zinc finger protein 64 homolog, isoforms 1 and 2 OS=Homo sapiens GN=ZFP64 PE=1 SV=3

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 43  WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH 95
           + C +C   +    +L RH+RV  G++P + C FC+ +C  K ++  H+R+KH
Sbjct: 259 FQCWLCSAKFKISSDLKRHMRVHSGEKPFK-CEFCNVRCTMKGNLKSHIRIKH 310

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
195582220	335	GD25971 [Drosophila simulans] gi|1941929	0.564	0.170	0.482	5e-09
195333169	335	GM20512 [Drosophila sechellia] gi|194125	0.564	0.170	0.482	5e-09
194884229	346	GG22734 [Drosophila erecta] gi|190659385	0.564	0.164	0.5	5e-09
195483702	341	GE13093 [Drosophila yakuba] gi|194176498	0.564	0.167	0.482	7e-09
194757982	337	GF11097 [Drosophila ananassae] gi|190622	0.564	0.169	0.482	7e-09
29539411	786	Lola protein isoform L [Drosophila melan	0.564	0.072	0.482	8e-09
24652482	787	longitudinals lacking, isoform C [Drosop	0.564	0.072	0.482	9e-09
198460531	626	GA25030 [Drosophila pseudoobscura pseudo	0.514	0.083	0.471	1e-08
195383684	332	GJ20133 [Drosophila virilis] gi|19414535	0.564	0.171	0.482	1e-08
195153479	622	GL17192 [Drosophila persimilis] gi|19411	0.514	0.083	0.471	1e-08

>gi|195582220|ref|XP_002080926.1| GD25971 [Drosophila simulans] gi|194192935|gb|EDX06511.1| GD25971 [Drosophila simulans]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 235 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 292

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195333169|ref|XP_002033264.1| GM20512 [Drosophila sechellia] gi|194125234|gb|EDW47277.1| GM20512 [Drosophila sechellia]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 235 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 292

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194884229|ref|XP_001976198.1| GG22734 [Drosophila erecta] gi|190659385|gb|EDV56598.1| GG22734 [Drosophila erecta]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C +IY  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 246 CPVCGRIYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 303

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195483702|ref|XP_002090397.1| GE13093 [Drosophila yakuba] gi|194176498|gb|EDW90109.1| GE13093 [Drosophila yakuba]

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 241 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 298

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757982|ref|XP_001961241.1| GF11097 [Drosophila ananassae] gi|190622539|gb|EDV38063.1| GF11097 [Drosophila ananassae]

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 227 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 284

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|29539411|dbj|BAC67588.1| Lola protein isoform L [Drosophila melanogaster] gi|29539451|dbj|BAC67608.1| Lola protein isoform L [Drosophila melanogaster] gi|29539491|dbj|BAC67628.1| Lola protein isoform L [Drosophila melanogaster] gi|29539531|dbj|BAC67648.1| Lola protein isoform L [Drosophila melanogaster]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 686 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 743

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652482|ref|NP_724946.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|78711864|ref|NP_724949.2| longitudinals lacking, isoform B [Drosophila melanogaster] gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L gi|7303724|gb|AAF58773.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|71911713|gb|AAF58776.3| longitudinals lacking, isoform B [Drosophila melanogaster]

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 687 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 744

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198460531|ref|XP_002138848.1| GA25030 [Drosophila pseudoobscura pseudoobscura] gi|198137047|gb|EDY69406.1| GA25030 [Drosophila pseudoobscura pseudoobscura]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 35/53 (66%)

Query: 45 CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
          CP C K Y +K NL RHLR ECG+ P++MC  CSY  ++K  +  H++ +H E
Sbjct: 42 CPRCEKAYTYKKNLSRHLRYECGRPPTEMCRHCSYVARYKHSLNMHVKTQHPE 94

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195383684|ref|XP_002050556.1| GJ20133 [Drosophila virilis] gi|194145353|gb|EDW61749.1| GJ20133 [Drosophila virilis]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 45  CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKIE 101
           CP+C ++Y  K +L  H + ECGKEP   C FC Y+ K K  I  HM   HKE FK+E
Sbjct: 220 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKFKLE 277

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195153479|ref|XP_002017653.1| GL17192 [Drosophila persimilis] gi|194113449|gb|EDW35492.1| GL17192 [Drosophila persimilis]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 35/53 (66%)

Query: 45 CPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
          CP C K Y +K NL RHLR ECG+ P++MC  CSY  ++K  +  H++ +H E
Sbjct: 40 CPRCEKAYTYKKNLSRHLRYECGRPPTEMCRHCSYVARYKHSLNMHVKTQHPE 92

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.574	0.059	0.423	4.5e-09
ZFIN|ZDB-GENE-070912-273	1672	rreb1b "ras responsive element	0.732	0.044	0.354	2.4e-06
UNIPROTKB|Q5SVQ8	909	ZBTB41 "Zinc finger and BTB do	0.623	0.069	0.296	2.5e-06
UNIPROTKB|E2QXV9	910	ZBTB41 "Uncharacterized protei	0.623	0.069	0.296	2.5e-06
UNIPROTKB|G3N3J7	824	ZBTB41 "Uncharacterized protei	0.623	0.076	0.296	4.1e-06
UNIPROTKB|F1MLT2	863	ZBTB41 "Uncharacterized protei	0.623	0.073	0.296	4.5e-06
ZFIN|ZDB-GENE-110913-171	419	si:dkey-51d8.7 "si:dkey-51d8.7	0.495	0.119	0.333	5.4e-06
UNIPROTKB|F1NSX7	739	ZNF366 "Uncharacterized protei	0.693	0.094	0.376	6.6e-06
ZFIN|ZDB-GENE-080215-19	420	zgc:173713 "zgc:173713" [Danio	0.495	0.119	0.333	7e-06
UNIPROTKB|G3N0I5	564	ZNF648 "Uncharacterized protei	0.485	0.086	0.34	7.3e-06

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 128 (50.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query:    40 KTTWACPMCRKIYAFKYNLMRHLRVECG-KEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
             ++ + C  C K Y +K  L RH  VECG KEP   C +CSYK K + ++  H+R  H E
Sbjct:   900 ESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHHPE 958

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-070912-273 rreb1b "ras responsive element binding protein 1b" [Danio rerio (taxid:7955)]

 Score = 124 (48.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 28/79 (35%), Positives = 40/79 (50%)

Query:    15 DTGAQNSQDDDEK-MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQM 73
             +TG Q   D  EK M V   V K+  KT + C  C+++++F   L  H+R   G  P Q 
Sbjct:   667 ETGKQEEFDSKEKDMRV---VPKKTAKTEYPCRFCKEVFSFLGGLQAHMRHHLGASPYQ- 722

Query:    74 CLFCSYKCKHKTDIMHHMR 92
             C  CSY    K  ++ H+R
Sbjct:   723 CTICSYAAPDKATLIRHLR 741

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q5SVQ8 ZBTB41 "Zinc finger and BTB domain-containing protein 41" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query:    38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
             G K  W C +C K    +  L  HLR+  G++P  +C  C    +H +    H+R+ H +
Sbjct:   542 GGKRKWTCFICGKSVRERTTLKEHLRIHSGEKP-HLCSICGQSFRHGSSYRLHLRVHHDD 600

Query:    98 FKIE 101
              + E
Sbjct:   601 KRYE 604

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2QXV9 ZBTB41 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 103 (41.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query:    38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
             G K  W C +C K    +  L  HLR+  G++P  +C  C    +H +    H+R+ H +
Sbjct:   543 GGKRKWTCFICGKSVRERTTLKEHLRIHSGEKP-HLCSICGQSFRHGSSYRLHLRVHHDD 601

Query:    98 FKIE 101
              + E
Sbjct:   602 KRYE 605

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3N3J7 ZBTB41 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 103 (41.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query:    38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
             G K  W C +C K    +  L  HLR+  G++P  +C  C    +H +    H+R+ H +
Sbjct:   490 GGKRKWTCFICGKSVRERTTLKEHLRIHSGEKP-HLCSICGQSFRHGSSYRLHLRVHHDD 548

Query:    98 FKIE 101
              + E
Sbjct:   549 KRYE 552

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MLT2 ZBTB41 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 103 (41.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query:    38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE 97
             G K  W C +C K    +  L  HLR+  G++P  +C  C    +H +    H+R+ H +
Sbjct:   496 GGKRKWTCFICGKSVRERTTLKEHLRIHSGEKP-HLCSICGQSFRHGSSYRLHLRVHHDD 554

Query:    98 FKIE 101
              + E
Sbjct:   555 KRYE 558

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-171 si:dkey-51d8.7 "si:dkey-51d8.7" [Danio rerio (taxid:7955)]

 Score = 88 (36.0 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query:    43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRL 93
             ++C +CRK ++ K  L+ H+RV   ++P   C  C      K D+  HMR+
Sbjct:   250 FSCILCRKSFSLKLTLIAHMRVHTREKP-HTCEQCGKSFGQKQDLYIHMRI 299

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1NSX7 ZNF366 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 116 (45.9 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 29/77 (37%), Positives = 37/77 (48%)

Query:    20 NSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY 79
             N Q DD      Y VD  G++  W CPMC K Y  KYNL+ H+    G +P   C  C  
Sbjct:   230 NLQIDDS-----YYVDVGGEQKRWQCPMCEKSYTSKYNLVTHILGHSGIKP-HACNRCGK 283

Query:    80 KCKHKTDIMHHMRLKHK 96
               K  + +  HM L H+
Sbjct:   284 LFKQLSHLHTHM-LTHQ 299

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000988 "protein binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IEA

GO:0043627 "response to estrogen stimulus" evidence=IEA

ZFIN|ZDB-GENE-080215-19 zgc:173713 "zgc:173713" [Danio rerio (taxid:7955)]

 Score = 87 (35.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query:    43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRL 93
             ++C +CRK ++ K  L+ H+RV   ++P   C  C      K D+  HMR+
Sbjct:   250 FSCILCRKSFSLKLTLIAHMRVHAREKP-HTCEQCGKSFGQKQDLDIHMRI 299

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G3N0I5 ZNF648 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 87 (35.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query:    43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR 92
             +AC +C K Y+ +  L +H R+  G+ P Q C FC       +D   H+R
Sbjct:   274 YACELCGKAYSHRATLQQHQRLHTGERPYQ-CPFCDKTYTWSSDHRKHIR 322

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
KOG2462|consensus	279		99.63
KOG2462|consensus	279		99.61
KOG3623|consensus	1007		99.43
KOG3623|consensus	1007		99.42
KOG3576|consensus	267		99.24
KOG3576|consensus	267		99.05
KOG1074|consensus	958		99.05
PHA02768	55	hypothetical protein; Provisional	99.02
PHA00733	128	hypothetical protein	98.98
KOG1074|consensus	958		98.89
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.71
PHA00616	44	hypothetical protein	98.66
PHA00616	44	hypothetical protein	98.62
PHA00732	79	hypothetical protein	98.54
KOG3993|consensus	500		98.39
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.39
KOG3608|consensus	467		98.38
PHA02768	55	hypothetical protein; Provisional	98.33
KOG3608|consensus	467		98.28
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.2
PHA00733	128	hypothetical protein	98.12
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.09
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.04
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	98.04
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.94
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.92
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.89
PLN03086	567	PRLI-interacting factor K; Provisional	97.83
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.57
PLN03086	567	PRLI-interacting factor K; Provisional	97.56
smart00355	26	ZnF_C2H2 zinc finger.	97.51
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.28
smart00355	26	ZnF_C2H2 zinc finger.	97.26
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.21
PRK04860	160	hypothetical protein; Provisional	97.0
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.98
PHA00732	79	hypothetical protein	96.96
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.92
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.75
KOG3993|consensus	500		96.37
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.93
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.7
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.62
COG5048	467	FOG: Zn-finger [General function prediction only]	94.19
KOG2186|consensus	276		94.01
PRK04860	160	hypothetical protein; Provisional	92.95
KOG1146|consensus	1406		92.1
KOG2893|consensus	341		92.08
PF09845	131	DUF2072: Zn-ribbon containing protein (DUF2072); I	91.79
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	91.77
COG1592	166	Rubrerythrin [Energy production and conversion]	90.78
COG4049	65	Uncharacterized protein containing archaeal-type C	90.72
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.1
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	89.53
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.52
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	88.73
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.63
COG5189	423	SFP1 Putative transcriptional repressor regulating	87.67
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	87.64
COG3357	97	Predicted transcriptional regulator containing an	86.53
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	85.64
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	85.12
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	85.1
KOG2785|consensus	390		84.74
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	84.56
PF09963	56	DUF2197: Uncharacterized protein conserved in bact	83.35
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	83.26
COG3364	112	Zn-ribbon containing protein [General function pre	82.92
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	82.84
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	82.53
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	81.62
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	81.48
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	80.93
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	80.87
smart00531	147	TFIIE Transcription initiation factor IIE.	80.59

>KOG2462|consensus

Probab=99.63  E-value=3.3e-16  Score=94.79  Aligned_cols=60  Identities=22%  Similarity=0.453  Sum_probs=43.1

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      -|++|.+|||.|..+=.|..|+|+|+| ++||.|..|+++|...++|+.|+++|.+-|+|+
T Consensus       186 l~c~C~iCGKaFSRPWLLQGHiRTHTG-EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  186 LPCECGICGKAFSRPWLLQGHIRTHTG-EKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             CCcccccccccccchHHhhcccccccC-CCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence            367777777777777777777777777 667777777777777777777777777666653

>KOG2462|consensus

Probab=99.61  E-value=3.4e-16  Score=94.75  Aligned_cols=64  Identities=20%  Similarity=0.410  Sum_probs=59.3

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHH
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      =++.-+.++|+|+|||.|..|++.|..+++|..|+.+|.+ .+.|.|..|+++|...+.|.+|..
T Consensus       201 WLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~-~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  201 WLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSD-VKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             HHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcC-CccccCcchhhHHHHHHHHHHhhh
Confidence            3455778899999999999999999999999999999999 889999999999999999999975

>KOG3623|consensus

Probab=99.43  E-value=1.4e-14  Score=97.31  Aligned_cols=60  Identities=28%  Similarity=0.544  Sum_probs=45.3

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      -.|.|..|.|+|...+.|.+|.--|+| .+||.|..|.++|.++..|..|.|+|.|||||.
T Consensus       893 gmyaCDqCDK~FqKqSSLaRHKYEHsG-qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQ  952 (1007)
T KOG3623|consen  893 GMYACDQCDKAFQKQSSLARHKYEHSG-QRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQ  952 (1007)
T ss_pred             ccchHHHHHHHHHhhHHHHHhhhhhcC-CCCcccchhhHhhhhhhhhhhhhhhccCCCcch
Confidence            367777777777777777777777777 777777777777777777777777777777763

>KOG3623|consensus

Probab=99.42  E-value=1.6e-13  Score=92.43  Aligned_cols=65  Identities=22%  Similarity=0.424  Sum_probs=59.9

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHH
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      +++..++=+|.|++||+|.+|.|.|..+-.|..|.|.|+| ++||.|+.|++.|++..+..+||..
T Consensus       908 SSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSG-EKPfQCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  908 SSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSG-EKPFQCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             HHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccC-CCcchhhhhhhhcccccchHhhhcc
Confidence            5555677789999999999999999999999999999999 8899999999999999999999874

>KOG3576|consensus

Probab=99.24  E-value=6e-13  Score=78.00  Aligned_cols=65  Identities=18%  Similarity=0.413  Sum_probs=52.0

Q ss_pred             cceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         31 PYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ..+++.|..-+.+.|..||+.|...-.|.+|.++|+| .+||.|..|+++|.+..+|..|.+.-+|
T Consensus       134 nrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtg-vrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  134 NRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG-VRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHHhhhccHHHHHHHhhccCcccchhhhhhhhccccC-ccccchhhhhHHHHhhccHHHHHHHHcC
Confidence            3444455556678888899999988889999999999 8889999999999999999888765443

>KOG3576|consensus

Probab=99.05  E-value=5.3e-11  Score=69.94  Aligned_cols=69  Identities=19%  Similarity=0.455  Sum_probs=60.8

Q ss_pred             ceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         32 YNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .....+.+..-|.|..|++.|....-|.+|+.-|+. .+.+.|..||+.|...-.|.+|.|+|+|-+||+
T Consensus       107 ~t~gsssd~d~ftCrvCgK~F~lQRmlnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrpyk  175 (267)
T KOG3576|consen  107 STIGSSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYK  175 (267)
T ss_pred             ccccCCCCCCeeeeehhhhhhhHHHHHHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccccc
Confidence            333444455689999999999999999999999998 878899999999999999999999999999885

>KOG1074|consensus

Probab=99.05  E-value=3.2e-11  Score=82.43  Aligned_cols=58  Identities=22%  Similarity=0.501  Sum_probs=54.0

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      .+++|..|.+.|...+.|..|.|.|+| ++||+|++||..|+.+.+|..|...|...+|
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTG-ERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p  409 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTG-ERPFQCNVCGNRFSTKGNLKVHFQRHREKYP  409 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCC-CCCeeecccccccccccceeeeeeeccccCC
Confidence            468899999999999999999999999 8899999999999999999999888877765

>PHA02768 hypothetical protein; Provisional

Probab=99.02  E-value=1e-10  Score=55.20  Aligned_cols=44  Identities=20%  Similarity=0.471  Sum_probs=39.1

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHH
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIM   88 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~   88 (101)
                      -|.|+.||+.|...++|..|++.|..   ++.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k---~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNT---NLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCC---cccCCcccceecccceeE
Confidence            47999999999999999999999983   688999999998777664

>PHA00733 hypothetical protein

Probab=98.98  E-value=1.2e-09  Score=60.76  Aligned_cols=56  Identities=21%  Similarity=0.538  Sum_probs=48.9

Q ss_pred             CCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        38 ~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      .+.+||.|..|++.|.....|..|++.+..   ++.|..|++.|....+|..|+...++
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~---~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYTEH---SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcCCc---CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            346799999999999999999999987633   68999999999999999999886654

>KOG1074|consensus

Probab=98.89  E-value=5.1e-10  Score=76.77  Aligned_cols=53  Identities=23%  Similarity=0.473  Sum_probs=27.4

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.+|-.|.+.+..++.|..|.+.|+| ++||+|.+||++|..+.+|+.|+.+|.
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtG-ERPFkCKiCgRAFtTkGNLkaH~~vHk  657 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTG-ERPFKCKICGRAFTTKGNLKAHMSVHK  657 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccC-cCccccccccchhccccchhhcccccc
Confidence            44455555555555555555555555 445555555555555555555554443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.71  E-value=1.5e-08  Score=41.13  Aligned_cols=26  Identities=35%  Similarity=0.715  Sum_probs=22.4

Q ss_pred             HHHHHhhhhhCCCCceeccccccccCC
Q psy10080         57 NLMRHLRVECGKEPSQMCLFCSYKCKH   83 (101)
Q Consensus        57 ~l~~h~~~h~~~~~~~~c~~c~~~f~~   83 (101)
                      +|..|+++|++ ++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~-~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG-EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS-SSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCC-CCCCCCCCCcCeeCc
Confidence            47889999999 788999999998863

...

>PHA00616 hypothetical protein

Probab=98.66  E-value=1.6e-08  Score=45.67  Aligned_cols=34  Identities=18%  Similarity=0.336  Sum_probs=26.3

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLF   76 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~   76 (101)
                      ||+|..||+.|...+.+..|++.|++ ..++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg-~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK-QNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC-CCccceeE
Confidence            57888888888888888888888888 66776654

>PHA00616 hypothetical protein

Probab=98.62  E-value=2.8e-08  Score=44.89  Aligned_cols=30  Identities=27%  Similarity=0.502  Sum_probs=28.1

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ||.|..||+.|.....|..|++.|+|++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            588999999999999999999999999775

>PHA00732 hypothetical protein

Probab=98.54  E-value=4.9e-08  Score=49.91  Aligned_cols=45  Identities=20%  Similarity=0.462  Sum_probs=37.3

Q ss_pred             ccccCcchhhccChHHHHHHhhh-hhCCCCceeccccccccCChHHHHHHHHH
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRV-ECGKEPSQMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~-h~~~~~~~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      ||.|..|++.|.....|..|++. |.+    +.|..|++.|.   .+..|.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~----~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL----TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC----CccCCCCCEeC---Chhhhhcc
Confidence            68999999999999999999884 554    47999999997   46667643

>KOG3993|consensus

Probab=98.39  E-value=1.8e-07  Score=60.48  Aligned_cols=56  Identities=21%  Similarity=0.446  Sum_probs=47.8

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCC--------------------------------CCceeccccccccCChHHHHH
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGK--------------------------------EPSQMCLFCSYKCKHKTDIMH   89 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~--------------------------------~~~~~c~~c~~~f~~~~~l~~   89 (101)
                      .|+|++|+|.|....+|..|+|+|...                                .-.|.|..|++.|.+...|+.
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            699999999999999999999988431                                113789999999999999999


Q ss_pred             HHHHhcCC
Q psy10080         90 HMRLKHKE   97 (101)
Q Consensus        90 h~~~h~~e   97 (101)
                      |+.+|...
T Consensus       375 Hqlthq~~  382 (500)
T KOG3993|consen  375 HQLTHQRA  382 (500)
T ss_pred             hHHhhhcc
Confidence            98888643

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.39  E-value=7.8e-07  Score=42.31  Aligned_cols=52  Identities=21%  Similarity=0.567  Sum_probs=40.3

Q ss_pred             ccccCcchhhccChHHHHHHhh-hhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLR-VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~-~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      .|.|+.|++. .....|..|.. .|..+.+.+.|+.|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            5889999994 55678999955 4766556789999998654  489999988764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3608|consensus

Probab=98.38  E-value=3.6e-07  Score=58.10  Aligned_cols=57  Identities=21%  Similarity=0.521  Sum_probs=31.9

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC-CCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FKI  100 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e-~~~  100 (101)
                      .+|.|..|.|.|.+...|..|+.-|..   .|.|+.|+.+....++|..|++..+.+ +||
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHvn---~ykCplCdmtc~~~ssL~~H~r~rHs~dkpf  293 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHVN---CYKCPLCDMTCSSASSLTTHIRYRHSKDKPF  293 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhhh---cccccccccCCCChHHHHHHHHhhhccCCCc
Confidence            355555555555555555555554443   355666666666666666666654433 554

>PHA02768 hypothetical protein; Provisional

Probab=98.33  E-value=4.6e-07  Score=42.89  Aligned_cols=25  Identities=16%  Similarity=0.444  Sum_probs=23.8

Q ss_pred             ceeccccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      .|.|+.||+.|....+|..|+++|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC
Confidence            3789999999999999999999999

>KOG3608|consensus

Probab=98.28  E-value=1.4e-06  Score=55.56  Aligned_cols=53  Identities=21%  Similarity=0.582  Sum_probs=35.5

Q ss_pred             ccccCcchhhccChHHHHHHhhh-hhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRV-ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~-h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      -|+|+.|..+.+..+.|.+|++. |+. .+||+|+.|++.|...+.|++|..+|.
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~-dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSK-DKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhcc-CCCccccchhhhhccHHHHHHHHHhcc
Confidence            46677777777777777777665 444 666777777777777777777766665

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.20  E-value=1.8e-06  Score=33.72  Aligned_cols=22  Identities=27%  Similarity=0.573  Sum_probs=13.7

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      |.|..|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00733 hypothetical protein

Probab=98.12  E-value=2.5e-06  Score=47.58  Aligned_cols=56  Identities=9%  Similarity=0.147  Sum_probs=44.2

Q ss_pred             CcccccCcchhhccChHHHHHHhh-----hhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLR-----VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~-----~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ++++.|..|.+.|..+..|..+..     .+.+ ..||.|..|++.|.....|..|++.+..
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~-~kPy~C~~Cgk~Fss~s~L~~H~r~h~~   98 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA-VSPYVCPLCLMPFSSSVSLKQHIRYTEH   98 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCC-CCCccCCCCCCcCCCHHHHHHHHhcCCc
Confidence            568999999998888777666511     2233 5689999999999999999999997643

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.09  E-value=2.4e-06  Score=33.39  Aligned_cols=23  Identities=43%  Similarity=0.940  Sum_probs=21.0

Q ss_pred             cccCcchhhccChHHHHHHhhhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVE   65 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h   65 (101)
                      |.|+.|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999998864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.04  E-value=4.5e-07  Score=36.71  Aligned_cols=23  Identities=17%  Similarity=0.551  Sum_probs=19.6

Q ss_pred             ceecccCCCcccccCcchhhccC
Q psy10080         32 YNVDKEGKKTTWACPMCRKIYAF   54 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~~c~~~~~~   54 (101)
                      .++..|.+++||.|+.|++.|..
T Consensus         4 ~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    4 RHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHhhhcCCCCCCCCCCCcCeeCc
Confidence            45668999999999999998863

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.04  E-value=6e-06  Score=38.23  Aligned_cols=35  Identities=14%  Similarity=0.410  Sum_probs=22.6

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      +..+..|..|++|+..+++.-+|.+|+.++++.||
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            33336677888888888888888888888887765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.94  E-value=6.2e-06  Score=33.46  Aligned_cols=24  Identities=17%  Similarity=0.212  Sum_probs=14.2

Q ss_pred             eeccccccccCChHHHHHHHHHhc
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.|..|++.|....+|..|++.|.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            556666666666666666655543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.92  E-value=1.5e-05  Score=31.04  Aligned_cols=23  Identities=26%  Similarity=0.612  Sum_probs=14.3

Q ss_pred             eeccccccccCChHHHHHHHHHh
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      |.|+.|+..|.....|..|++.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45667777777777777776655

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.89  E-value=7.2e-06  Score=33.27  Aligned_cols=26  Identities=27%  Similarity=0.607  Sum_probs=23.4

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999987653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.83  E-value=2.5e-05  Score=53.01  Aligned_cols=51  Identities=16%  Similarity=0.341  Sum_probs=22.1

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      ++.|+.|++.|. ...+..|+..+.   .++.|+ |+..+ ....|..|+.+|.+++
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~K  503 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLR  503 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCC
Confidence            344555555443 334444444432   134444 44322 3344444444444443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.63  E-value=2.5e-05  Score=49.29  Aligned_cols=53  Identities=23%  Similarity=0.503  Sum_probs=41.8

Q ss_pred             CcccccCc--chhhccChHHHHHHhhh-h-----------------hCCCCceeccccccccCChHHHHHHHH
Q psy10080         40 KTTWACPM--CRKIYAFKYNLMRHLRV-E-----------------CGKEPSQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        40 ~~p~~C~~--c~~~~~~~~~l~~h~~~-h-----------------~~~~~~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      .+||+|++  |.|.+.....|.-|+.- |                 ..+.+||+|.+|++.+.....|..|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            37999975  99999999999988642 2                 111478999999999998888877653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.57  E-value=6.7e-05  Score=29.11  Aligned_cols=23  Identities=35%  Similarity=0.847  Sum_probs=19.1

Q ss_pred             cccCcchhhccChHHHHHHhhhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVE   65 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h   65 (101)
                      |.|+.|++.|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999998865

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.56  E-value=0.00011  Score=50.07  Aligned_cols=55  Identities=18%  Similarity=0.382  Sum_probs=41.6

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccC----------ChHHHHHHHHHhcCCCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK----------HKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~----------~~~~l~~h~~~h~~e~~   99 (101)
                      .|+.|+ |++.+ ....|..|+..|.+ .+++.|..|+..|.          ....|..|.... |.++
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp-~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt  541 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCP-LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT  541 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCC-CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc
Confidence            588898 98655 56788889888888 77889999988874          235788888775 5544

>smart00355 ZnF_C2H2 zinc finger

Probab=97.51  E-value=0.00013  Score=28.64  Aligned_cols=22  Identities=32%  Similarity=0.522  Sum_probs=13.6

Q ss_pred             eccccccccCChHHHHHHHHHh
Q psy10080         73 MCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        73 ~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4566666666666666666654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.28  E-value=0.00032  Score=36.94  Aligned_cols=24  Identities=29%  Similarity=0.624  Sum_probs=20.8

Q ss_pred             ceeccccccccCChHHHHHHHHHh
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      .+.|..|+..|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            488999999999999999999864

>smart00355 ZnF_C2H2 zinc finger

Probab=97.26  E-value=0.00031  Score=27.54  Aligned_cols=24  Identities=33%  Similarity=0.791  Sum_probs=21.3

Q ss_pred             cccCcchhhccChHHHHHHhhhhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999988664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.21  E-value=0.00068  Score=31.49  Aligned_cols=35  Identities=26%  Similarity=0.469  Sum_probs=23.6

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCc
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPS   71 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~   71 (101)
                      ....+.|..|+.|+..+....+|.+|+....+ .+|
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~-~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHF-KKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTT-TS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhc-ccC
Confidence            34456799999999999999999999987766 443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.00  E-value=0.00049  Score=39.85  Aligned_cols=39  Identities=28%  Similarity=0.527  Sum_probs=32.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCCh
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHK   84 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~   84 (101)
                      -+|.|. |+.   ....+.+|.++|++ .++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g-~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRG-EAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcC-CccEECCCCCceeEEe
Confidence            589998 987   55678899999999 8789999999887643

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.98  E-value=0.00095  Score=26.06  Aligned_cols=23  Identities=30%  Similarity=0.753  Sum_probs=14.9

Q ss_pred             eeccccccccCChHHHHHHHHHhc
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            46777777666 777877777654

>PHA00732 hypothetical protein

Probab=96.96  E-value=0.00084  Score=34.38  Aligned_cols=26  Identities=15%  Similarity=0.301  Sum_probs=22.8

Q ss_pred             ceeccccccccCChHHHHHHHHH-hcC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRL-KHK   96 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~-h~~   96 (101)
                      ||.|..|++.|.+..+|..|++. |++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~   27 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL   27 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC
Confidence            57899999999999999999984 554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.92  E-value=0.00077  Score=26.54  Aligned_cols=22  Identities=18%  Similarity=0.472  Sum_probs=14.1

Q ss_pred             eeccccccccCChHHHHHHHHH
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      |.|..|...|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            3466666677777666666653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.75  E-value=0.0011  Score=26.08  Aligned_cols=23  Identities=30%  Similarity=0.735  Sum_probs=20.3

Q ss_pred             cccCcchhhccChHHHHHHhhhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVE   65 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h   65 (101)
                      |.|..|++.|.....+..|.+.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999997754

>KOG3993|consensus

Probab=96.37  E-value=0.00085  Score=44.09  Aligned_cols=53  Identities=17%  Similarity=0.375  Sum_probs=42.7

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      -|-|..|.-.|.....|..|.=...- ..-|+|+.|++.|+-..+|..|.|-|.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV-~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV-HVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE-EeeecCCcccccccCchhhhhhhcccC
Confidence            47899999899999999888432222 234899999999999999999998774

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.93  E-value=0.0042  Score=24.95  Aligned_cols=21  Identities=24%  Similarity=0.710  Sum_probs=12.5

Q ss_pred             cccCcchhhccChHHHHHHhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      |.|..|++.|.....+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666655544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.70  E-value=0.012  Score=23.25  Aligned_cols=20  Identities=20%  Similarity=0.526  Sum_probs=11.9

Q ss_pred             eccccccccCChHHHHHHHHH
Q psy10080         73 MCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        73 ~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      .|+.|++.| ....|..|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            466666666 45566666543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.62  E-value=0.034  Score=23.47  Aligned_cols=22  Identities=14%  Similarity=0.501  Sum_probs=16.4

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4668888888887777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.19  E-value=0.0082  Score=39.08  Aligned_cols=58  Identities=21%  Similarity=0.325  Sum_probs=51.5

Q ss_pred             cccccCcchhhccChHHHHHHhh--hhhCCC--Cceecc--ccccccCChHHHHHHHHHhcCCCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLR--VECGKE--PSQMCL--FCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~--~h~~~~--~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      .++.|..|...|.....+..|.+  .|.+ .  .++.|+  .|++.|.+...+..|..+|++..+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSG-ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccc-ccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            47889999999999999999999  7999 5  789999  799999999999999998887643

>KOG2186|consensus

Probab=94.01  E-value=0.026  Score=34.96  Aligned_cols=49  Identities=14%  Similarity=0.331  Sum_probs=34.3

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.|..||.... +..+..|+....+ . .|.|..|+..|.. -+...|....+
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCrn-~-~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCRN-A-YFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhccC-C-eeEEeeccccccc-chhhhhhhhcc
Confidence            67888887665 4457778776665 3 5888889988876 55666665444

>PRK04860 hypothetical protein; Provisional

Probab=92.95  E-value=0.079  Score=30.84  Aligned_cols=26  Identities=23%  Similarity=0.393  Sum_probs=22.3

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +|.|. |+.   ....+..|.++|+|+++|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~Y  144 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVY  144 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccE
Confidence            58897 886   788899999999999765

>KOG1146|consensus

Probab=92.10  E-value=0.2  Score=37.88  Aligned_cols=57  Identities=21%  Similarity=0.404  Sum_probs=45.9

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhh-----------------C-------CCCceeccccccccCChHHHHHHH
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVEC-----------------G-------KEPSQMCLFCSYKCKHKTDIMHHM   91 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~-----------------~-------~~~~~~c~~c~~~f~~~~~l~~h~   91 (101)
                      .+...+.+.|+.|+..|.....|..|++.-.                 +       ...+|.|..|..+++...+|-.|+
T Consensus       459 L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihl  538 (1406)
T KOG1146|consen  459 LHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHL  538 (1406)
T ss_pred             eecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHH
Confidence            3444589999999999999999999998710                 0       024688999999999999999997


Q ss_pred             H
Q psy10080         92 R   92 (101)
Q Consensus        92 ~   92 (101)
                      .
T Consensus       539 q  539 (1406)
T KOG1146|consen  539 Q  539 (1406)
T ss_pred             H
Confidence            6

>KOG2893|consensus

Probab=92.08  E-value=0.042  Score=33.91  Aligned_cols=42  Identities=19%  Similarity=0.348  Sum_probs=30.7

Q ss_pred             ccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHH
Q psy10080         44 ACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHH   90 (101)
Q Consensus        44 ~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h   90 (101)
                      .|..|++.|....-|..||+     .+.|+|-.|-+.+.+-..|.-|
T Consensus        12 wcwycnrefddekiliqhqk-----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK-----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhh-----hccceeeeehhhhccCCCceee
Confidence            47778888888888888877     5678888887666555555544

>PF09845 DUF2072: Zn-ribbon containing protein (DUF2072); InterPro: IPR018645 This archaeal Zinc-ribbon containing proteins have no known function

Probab=91.79  E-value=0.1  Score=29.23  Aligned_cols=15  Identities=13%  Similarity=0.516  Sum_probs=13.0

Q ss_pred             ccccCcchhhccChH
Q psy10080         42 TWACPMCRKIYAFKY   56 (101)
Q Consensus        42 p~~C~~c~~~~~~~~   56 (101)
                      |++|..||+.|...+
T Consensus         1 PH~Ct~Cg~~f~dgs   15 (131)
T PF09845_consen    1 PHQCTKCGRVFEDGS   15 (131)
T ss_pred             CcccCcCCCCcCCCc
Confidence            789999999998765

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=91.77  E-value=0.15  Score=26.55  Aligned_cols=24  Identities=29%  Similarity=0.782  Sum_probs=21.1

Q ss_pred             ccccCcchhhccChHHHHHHhhhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVE   65 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h   65 (101)
                      .+.|..|++.|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            799999999999999999998864

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.78  E-value=0.12  Score=30.29  Aligned_cols=23  Identities=35%  Similarity=1.107  Sum_probs=18.0

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCS   78 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~   78 (101)
                      -|.|++||.+             +.+ ..|.+|++|+
T Consensus       134 ~~vC~vCGy~-------------~~g-e~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEG-EAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccC-CCCCcCCCCC
Confidence            6999999843             445 6688899998

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.72  E-value=0.22  Score=23.67  Aligned_cols=30  Identities=20%  Similarity=0.552  Sum_probs=23.2

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhh
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      ..+..|+.-+.|+.|+..|.....+.+|..
T Consensus         9 v~~RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049           9 VRDRDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             eeccCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            344556777889999999998888888854

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.10  E-value=0.14  Score=21.53  Aligned_cols=24  Identities=33%  Similarity=0.874  Sum_probs=14.3

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      |.|..||.++.-.             ..++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~-------------~~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGE-------------EAPWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCC-------------cCCCcCcCCCC
Confidence            5677777554321             24667877764

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=89.53  E-value=0.073  Score=32.39  Aligned_cols=43  Identities=26%  Similarity=0.495  Sum_probs=27.6

Q ss_pred             cccccCcchhhccChHHHHHHhhh----------hhCCCCc-----eeccccccccCCh
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRV----------ECGKEPS-----QMCLFCSYKCKHK   84 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~----------h~~~~~~-----~~c~~c~~~f~~~   84 (101)
                      +...|+.|++.|..........++          ..+ ..|     .+|+.||.++...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~-vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKG-VNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCC-CCCeeeeEEECCCCCCccccc
Confidence            467899999999887544433321          122 222     5799999877533

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.52  E-value=0.15  Score=21.72  Aligned_cols=25  Identities=32%  Similarity=0.875  Sum_probs=16.1

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      .|.|..||.++...             ..|..|+.|+.
T Consensus         2 ~~~C~~CG~i~~g~-------------~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGE-------------EAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECC-------------cCCCcCcCCCC
Confidence            47888888654321             34567888874

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=88.73  E-value=0.27  Score=21.20  Aligned_cols=34  Identities=15%  Similarity=0.324  Sum_probs=21.6

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceeccccccccC
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK   82 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   82 (101)
                      ..|+.|+..|.......     ... .....|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~-~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GAN-GGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCC-CCEEECCCCCCEEE
Confidence            57889998877665421     111 22467999987763

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.63  E-value=0.24  Score=26.95  Aligned_cols=30  Identities=17%  Similarity=0.421  Sum_probs=18.9

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCCh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHK   84 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~   84 (101)
                      ..|+.||..|-..           . +.|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------n-k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------N-KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------C-CCCccCCCCCCccCcc
Confidence            3677787655432           1 4467788888777544

The function of members of this family is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=87.67  E-value=0.13  Score=33.13  Aligned_cols=24  Identities=25%  Similarity=0.519  Sum_probs=20.6

Q ss_pred             CcccccCcchhhccChHHHHHHhh
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      .+||.|..|+|.+.....|.-|+.
T Consensus       396 ~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         396 DKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CCceeccccchhhccCccceeccc
Confidence            589999999999999888887743

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=87.64  E-value=0.41  Score=20.67  Aligned_cols=34  Identities=18%  Similarity=0.510  Sum_probs=21.5

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceeccccccccC
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK   82 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   82 (101)
                      -.|+.|+..|.....     ++..+ .....|..|+..|.
T Consensus         3 i~CP~C~~~f~v~~~-----~l~~~-~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDD-----KLPAG-GRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHH-----HcccC-CcEEECCCCCcEee
Confidence            368888888776653     11222 33577888887663

>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]

Probab=86.53  E-value=0.3  Score=25.61  Aligned_cols=27  Identities=15%  Similarity=0.277  Sum_probs=19.1

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccc
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCS   78 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~   78 (101)
                      .|-.|..||..|.....           ++|..|+.|.
T Consensus        57 ~Pa~CkkCGfef~~~~i-----------k~pSRCP~CK   83 (97)
T COG3357          57 RPARCKKCGFEFRDDKI-----------KKPSRCPKCK   83 (97)
T ss_pred             cChhhcccCcccccccc-----------CCcccCCcch
Confidence            58899999988775211           4567788874

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=85.64  E-value=0.31  Score=25.34  Aligned_cols=31  Identities=26%  Similarity=0.589  Sum_probs=22.2

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK   82 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   82 (101)
                      .+|.|+.|++.        .+.+.-++   .|.|..|+..|.
T Consensus        34 ~~~~Cp~C~~~--------~VkR~a~G---IW~C~kCg~~fA   64 (89)
T COG1997          34 AKHVCPFCGRT--------TVKRIATG---IWKCRKCGAKFA   64 (89)
T ss_pred             cCCcCCCCCCc--------ceeeeccC---eEEcCCCCCeec
Confidence            47899999864        22344455   689999998874

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=85.12  E-value=0.33  Score=21.98  Aligned_cols=29  Identities=17%  Similarity=0.617  Sum_probs=18.2

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceecccccccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKC   81 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f   81 (101)
                      .|.|+.||..|.....           ...+.|+.||..+
T Consensus         3 ~y~C~~CG~~~~~~~~-----------~~~~~Cp~CG~~~   31 (46)
T PRK00398          3 EYKCARCGREVELDEY-----------GTGVRCPYCGYRI   31 (46)
T ss_pred             EEECCCCCCEEEECCC-----------CCceECCCCCCeE
Confidence            5788888876654321           1146788887654

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=85.10  E-value=0.46  Score=29.04  Aligned_cols=27  Identities=26%  Similarity=0.333  Sum_probs=17.1

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .|.|..|++.|.-...+..|+...+.+
T Consensus        77 K~~C~lc~KlFkg~eFV~KHI~nKH~e  103 (214)
T PF04959_consen   77 KWRCPLCGKLFKGPEFVRKHIFNKHPE  103 (214)
T ss_dssp             EEEE-SSS-EESSHHHHHHHHHHH-HH
T ss_pred             EECCCCCCcccCChHHHHHHHhhcCHH
Confidence            477777888887777777777665543

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>KOG2785|consensus

Probab=84.74  E-value=3  Score=27.78  Aligned_cols=53  Identities=25%  Similarity=0.355  Sum_probs=41.1

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCC----------------------Cceeccccc---cccCChHHHHHHHHH
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKE----------------------PSQMCLFCS---YKCKHKTDIMHHMRL   93 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~----------------------~~~~c~~c~---~~f~~~~~l~~h~~~   93 (101)
                      -|=.|-.|++.+..--.-..||..+.+.-                      .-+.|..|.   +.|.+..+.+.||.-
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            46678999999888877788887655531                      236788887   999999999999873

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=84.56  E-value=0.61  Score=18.57  Aligned_cols=10  Identities=30%  Similarity=1.042  Sum_probs=7.5

Q ss_pred             eccccccccC
Q psy10080         73 MCLFCSYKCK   82 (101)
Q Consensus        73 ~c~~c~~~f~   82 (101)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            5888888774

Several members are annotated as putative helicases.

>PF09963 DUF2197: Uncharacterized protein conserved in bacteria (DUF2197); InterPro: IPR019241 This family represents various hypothetical bacterial proteins with no known function

Probab=83.35  E-value=0.91  Score=21.67  Aligned_cols=52  Identities=17%  Similarity=0.272  Sum_probs=26.1

Q ss_pred             ccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         44 ACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        44 ~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      +|..|++.+.-........+.-..+...|.|..|....    ......+..+|.+.
T Consensus         4 kC~lCdk~~~Id~~~~~aKrLrnrPi~tYmC~eC~~RI----~~~t~~r~~~g~f~   55 (56)
T PF09963_consen    4 KCILCDKKEEIDEDTPEAKRLRNRPIHTYMCDECKERI----REETNERIATGKFN   55 (56)
T ss_pred             EEEecCCEEEeccCCHHHHHhhcCCCcceeChhHHHHH----hHHHHhhhccCCCC
Confidence            56677776544432222223322325568888885332    23334445555543

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=83.26  E-value=1  Score=21.73  Aligned_cols=32  Identities=16%  Similarity=0.630  Sum_probs=17.2

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      .|.|+.||...-..-.     +--.- ..+|.|+.||-
T Consensus        25 ~F~CPnCG~~~I~RC~-----~CRk~-~~~Y~CP~CGF   56 (59)
T PRK14890         25 KFLCPNCGEVIIYRCE-----KCRKQ-SNPYTCPKCGF   56 (59)
T ss_pred             EeeCCCCCCeeEeech-----hHHhc-CCceECCCCCC
Confidence            5778888765222211     11111 34788988873

>COG3364 Zn-ribbon containing protein [General function prediction only]

Probab=82.92  E-value=0.69  Score=24.84  Aligned_cols=15  Identities=13%  Similarity=0.470  Sum_probs=12.7

Q ss_pred             ccccCcchhhccChH
Q psy10080         42 TWACPMCRKIYAFKY   56 (101)
Q Consensus        42 p~~C~~c~~~~~~~~   56 (101)
                      |++|..||..|..-+
T Consensus         2 pH~CtrCG~vf~~g~   16 (112)
T COG3364           2 PHQCTRCGEVFDDGS   16 (112)
T ss_pred             Cceeccccccccccc
Confidence            789999999998754

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=82.84  E-value=0.86  Score=25.75  Aligned_cols=24  Identities=33%  Similarity=0.520  Sum_probs=12.8

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ...|..||+.|...   .+|++.|+|.
T Consensus        72 ~i~clecGk~~k~L---krHL~~~~gl   95 (132)
T PF05443_consen   72 YIICLECGKKFKTL---KRHLRTHHGL   95 (132)
T ss_dssp             -EE-TBT--EESBH---HHHHHHTT-S
T ss_pred             eeEEccCCcccchH---HHHHHHccCC
Confidence            35677788777543   7777777654

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>smart00614 ZnF_BED BED zinc finger

Probab=82.53  E-value=1.4  Score=20.23  Aligned_cols=8  Identities=25%  Similarity=0.787  Sum_probs=4.3

Q ss_pred             HHHHHHHH
Q psy10080         85 TDIMHHMR   92 (101)
Q Consensus        85 ~~l~~h~~   92 (101)
                      ++|.+|+.
T Consensus        37 s~L~rHl~   44 (50)
T smart00614       37 SNLRRHLR   44 (50)
T ss_pred             HHHHHHHH
Confidence            45555555

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=81.62  E-value=0.82  Score=25.59  Aligned_cols=30  Identities=7%  Similarity=0.106  Sum_probs=18.3

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCCh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHK   84 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~   84 (101)
                      ..|+.||+.|-..           . +.|..|+.||..|.-.
T Consensus        10 r~Cp~cg~kFYDL-----------n-k~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYDL-----------N-RRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCcccccc-----------C-CCCccCCCcCCccCcc
Confidence            3677777655432           1 4466778887776544

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=81.48  E-value=1.2  Score=19.16  Aligned_cols=33  Identities=18%  Similarity=0.389  Sum_probs=20.1

Q ss_pred             cccCcchhhccChHHHHHHhhhhhCCCCceecccccccc
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKC   81 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f   81 (101)
                      ..|+.|+..|......     +... .....|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~-----ip~~-g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK-----IPPK-GRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH-----CCCC-CcEEECCCCCCEe
Confidence            3678888777766542     1111 2346788888765

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=80.93  E-value=2  Score=23.18  Aligned_cols=25  Identities=28%  Similarity=0.583  Sum_probs=21.9

Q ss_pred             eec----cccccccCChHHHHHHHHHhcC
Q psy10080         72 QMC----LFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        72 ~~c----~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      |.|    ..|+..+.+...+..|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            779    8899999999999999988765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=80.87  E-value=0.83  Score=22.04  Aligned_cols=31  Identities=16%  Similarity=0.519  Sum_probs=17.9

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCS   78 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~   78 (101)
                      .|.|+.||...-....     +--.- ..+|.|+.||
T Consensus        27 ~F~CPnCGe~~I~Rc~-----~CRk~-g~~Y~Cp~CG   57 (61)
T COG2888          27 KFPCPNCGEVEIYRCA-----KCRKL-GNPYRCPKCG   57 (61)
T ss_pred             EeeCCCCCceeeehhh-----hHHHc-CCceECCCcC
Confidence            5788888854332221     11111 4479999887

>smart00531 TFIIE Transcription initiation factor IIE

Probab=80.59  E-value=1  Score=25.80  Aligned_cols=38  Identities=18%  Similarity=0.396  Sum_probs=23.7

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK   82 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   82 (101)
                      ..-|.|+.|+..|.....+..- .   . ...|.|+.||....
T Consensus        97 ~~~Y~Cp~C~~~y~~~ea~~~~-d---~-~~~f~Cp~Cg~~l~  134 (147)
T smart00531       97 NAYYKCPNCQSKYTFLEANQLL-D---M-DGTFTCPRCGEELE  134 (147)
T ss_pred             CcEEECcCCCCEeeHHHHHHhc-C---C-CCcEECCCCCCEEE
Confidence            3478899999888854332210 1   1 22389999987653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-04

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 36.1 bits (82), Expect = 4e-04
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 43  WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH 95
           + CP+C   ++   +L +H+R     E +++C  C  +       + H+  KH
Sbjct: 75  FVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKH 124

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.86
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.79
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.76
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.76
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.75
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.74
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.73
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.73
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.71
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.71
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.7
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.7
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.68
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.67
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.66
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.66
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.63
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.62
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.62
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.62
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.62
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.6
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.59
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.58
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.58
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.57
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.57
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.57
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.57
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.57
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.56
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.55
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.55
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.55
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.53
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.51
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.51
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.49
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.46
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.46
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.46
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.45
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.44
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.44
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.42
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.42
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.41
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.4
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.4
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.34
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.33
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.32
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.32
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.31
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.3
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.3
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.3
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.29
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.26
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.26
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.26
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.25
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.24
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.24
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.22
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.22
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.2
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.2
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.19
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.19
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.18
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.17
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.16
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.15
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.14
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.13
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.13
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.12
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.06
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.03
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.01
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.0
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.99
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.95
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.95
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.94
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.93
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.91
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.9
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.85
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.84
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.83
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.81
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.81
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.79
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.77
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.77
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.76
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.75
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.75
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.74
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.74
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.73
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.72
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.72
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.71
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.71
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.7
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.68
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.66
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.66
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.65
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.65
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.64
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.64
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.07
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.62
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.6
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.6
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.59
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.59
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.59
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.0
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.58
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.55
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.55
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.54
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.54
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.53
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.53
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.53
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.52
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.51
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.48
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.48
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.48
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.48
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.47
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.46
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.42
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.4
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.76
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.39
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.75
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.74
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.37
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.71
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.33
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.3
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.19
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.15
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.01
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.81
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.64
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.27
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.04
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.76
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.98
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	93.36
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	92.3
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	91.54
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.99
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.49
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	88.49
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	86.2
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.38
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	84.0
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	82.98
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	81.73
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	81.48
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	81.44
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	80.27
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	80.04

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.86  E-value=3.5e-22  Score=97.05  Aligned_cols=58  Identities=21%  Similarity=0.472  Sum_probs=55.5

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      ++||.|..|++.|...+.|..|+++|++ .+||.|..|++.|.+..+|..|+++|+||.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG-YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT-CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC-CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999 889999999999999999999999999984

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.79  E-value=4.1e-19  Score=89.37  Aligned_cols=64  Identities=22%  Similarity=0.452  Sum_probs=60.4

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-CCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCC-CCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            45667899999999999999999999999999 88999999999999999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.76  E-value=4.7e-19  Score=98.49  Aligned_cols=87  Identities=13%  Similarity=0.164  Sum_probs=59.2

Q ss_pred             cccccccCCCCCCCCCCCccccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHH
Q psy10080          8 DDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDI   87 (101)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l   87 (101)
                      +..|.+..|+....    ....+..+...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|++.|.....|
T Consensus        20 ek~y~C~~C~k~F~----~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           20 RVYYICIVCKRSYV----CLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG-ERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEEEEETTTCCEES----CHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHT-CCCEEESSSCCEESSHHHH
T ss_pred             CcCeECCCCCCCcC----CHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCC-CccccCCCCCCCcCCHHHH
Confidence            34455555544322    223444555667777777777777777777777777777777 6677777777777777777


Q ss_pred             HHHHHHhcCCCC
Q psy10080         88 MHHMRLKHKEFK   99 (101)
Q Consensus        88 ~~h~~~h~~e~~   99 (101)
                      ..|+++|++++|
T Consensus        95 ~~H~~~hh~~~p  106 (133)
T 2lt7_A           95 SSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHTCCCT
T ss_pred             HHHhHHhcCCCC
Confidence            777777777654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.8e-18  Score=87.56  Aligned_cols=65  Identities=18%  Similarity=0.412  Sum_probs=61.0

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .+.+++||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-SCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            45667899999999999999999999999999 789999999999999999999999999999885

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.9e-18  Score=85.39  Aligned_cols=64  Identities=22%  Similarity=0.438  Sum_probs=60.0

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+.+++||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|++++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            46778899999999999999999999999999 78899999999999999999999999999764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.74  E-value=5.7e-19  Score=98.15  Aligned_cols=69  Identities=16%  Similarity=0.229  Sum_probs=64.6

Q ss_pred             cceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         31 PYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+...++.|+++|.|..|++.|...+.|..|+++|.+ .++|.|..|++.|.....|..|+++|+|++||
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   79 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW-EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRY   79 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC-CSCEECSSSSCEESSHHHHHHHHHHHHTCCCE
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC-CCCeeCCccCeecccccchhhhccccCCCccc
Confidence            4556678999999999999999999999999999999 88999999999999999999999999999876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=2e-18  Score=91.27  Aligned_cols=73  Identities=16%  Similarity=0.190  Sum_probs=64.9

Q ss_pred             ccccceecccCCCcccccCcchhhcc-ChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYA-FKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~-~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .....+...|.++++|.|..|++.|. ....|..|+++|.+..++|.|..|++.|.+...|..|+++|++++|+
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            44456677899999999999999999 99999999999886345899999999999999999999999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=9.1e-18  Score=84.00  Aligned_cols=64  Identities=22%  Similarity=0.453  Sum_probs=60.0

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG-EKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGC-SCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4568889999999999999999999999999999 889999999999999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=5e-18  Score=90.36  Aligned_cols=65  Identities=14%  Similarity=0.261  Sum_probs=58.7

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhh-hh---hCCCCceeccccccccCChHHHHHH-HHHhcCCCCCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLR-VE---CGKEPSQMCLFCSYKCKHKTDIMHH-MRLKHKEFKIE  101 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~-~h---~~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~e~~~~  101 (101)
                      .-.|++||.|..|++.|...+.|..|++ .|   .+ .+||.|..|++.|.....|..| +++|+|++||.
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~-ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL-NSSYVCVECNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCC-SCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCee
Confidence            3467889999999999999999999997 58   55 7789999999999999999999 89999999873

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.71  E-value=1.5e-17  Score=88.66  Aligned_cols=73  Identities=14%  Similarity=0.235  Sum_probs=66.1

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ..+..+...|.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|.
T Consensus        31 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           31 YNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCC-CCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            4445566778888999999999999999999999999999 788999999999999999999999999998874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.70  E-value=2.4e-17  Score=85.06  Aligned_cols=65  Identities=20%  Similarity=0.368  Sum_probs=58.3

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHH-HHhcCCC
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHM-RLKHKEF   98 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~-~~h~~e~   98 (101)
                      ....+...++|.|+.|++.|.....|..|+++|.+ .+||.|..|++.|....+|..|+ ++|++|.
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLHA-AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSC-SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccC-CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34456677899999999999999999999999999 88999999999999999999997 5788774

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.70  E-value=3.5e-17  Score=78.22  Aligned_cols=57  Identities=33%  Similarity=0.670  Sum_probs=50.5

Q ss_pred             CCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         39 KKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        39 ~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      +++||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35799999999999999999999999999 8899999999999999999999999874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=9.4e-17  Score=82.51  Aligned_cols=70  Identities=14%  Similarity=0.218  Sum_probs=62.6

Q ss_pred             cceecccCCCcccccCcchhhccChHHHHHHhhhhhCCC---CceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         31 PYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKE---PSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~---~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ..+...|.+++||.|..|++.|.....|..|++.+....   ++|.|..|++.|.....|..|+++|++++++
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   76 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGV   76 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCc
Confidence            356678899999999999999999999999998876633   6899999999999999999999999998765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.68  E-value=6.1e-17  Score=77.35  Aligned_cols=57  Identities=23%  Similarity=0.466  Sum_probs=54.1

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      ||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|++++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-CCCEECSSSSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC-CCCccCCCCCchhcCHHHHHHHHHHhcccCC
Confidence            68999999999999999999999999 8899999999999999999999999998863

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.9e-17  Score=85.40  Aligned_cols=65  Identities=15%  Similarity=0.207  Sum_probs=58.3

Q ss_pred             cceecccCCCcccccCcchhhc-cChHHHHHHhhhhhCCCCceeccccccccCChHHHHHH-HHHhcCC
Q psy10080         31 PYNVDKEGKKTTWACPMCRKIY-AFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHH-MRLKHKE   97 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~~c~~~~-~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~e   97 (101)
                      ......+.+++||.|..|++.| .....|..|+++| + .++|.|..|++.|.....|..| +++|+++
T Consensus        23 ~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~-~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K-QEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             HHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C-CCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             HHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C-CCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3444556678899999999999 9999999999999 8 8899999999999999999999 8999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1e-16  Score=83.97  Aligned_cols=88  Identities=18%  Similarity=0.297  Sum_probs=72.7

Q ss_pred             ccccccccCCCCCCCCCCCccccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHH
Q psy10080          7 TDDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTD   86 (101)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~   86 (101)
                      +...+.+..++.....    ...+..+...|.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....
T Consensus         5 ~~~~~~C~~C~~~f~~----~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSR----KDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD-ERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCBTTTTBCCCC----HHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCC-CCCEECSSSSCEESSHHH
T ss_pred             CCcCeECCCCCCccCC----HHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHH
Confidence            4455666665553332    34455667788889999999999999999999999999999 788999999999999999


Q ss_pred             HHHHHHHhcCCCC
Q psy10080         87 IMHHMRLKHKEFK   99 (101)
Q Consensus        87 l~~h~~~h~~e~~   99 (101)
                      |..|+++|+++++
T Consensus        80 l~~H~~~h~~~~~   92 (96)
T 2dmd_A           80 LTVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHHTTCCSCCC
T ss_pred             HHHHHHHhcCCCC
Confidence            9999999999854

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=7e-17  Score=79.33  Aligned_cols=61  Identities=23%  Similarity=0.497  Sum_probs=55.9

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhh-h-hCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRV-E-CGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~-h-~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      .+|.+++||.|..|++.|.....|..|++. | .+ .++|.|..|++.|.....|..|++++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~-~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN-VKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSS-CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCC-CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            357788999999999999999999999988 6 46 7899999999999999999999999876

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=3e-16  Score=79.30  Aligned_cols=69  Identities=14%  Similarity=0.252  Sum_probs=59.9

Q ss_pred             cceecccCCCcccccCcchhhccChHHHHHHhh-hhhCCCCceeccccccccCChHHHHHHHHHhcCC-CC
Q psy10080         31 PYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLR-VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE-FK   99 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~-~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e-~~   99 (101)
                      ..+..+|.+++||.|..|++.|.....|..|++ .|.++.++|.|..|++.|.....|..|++.+++. .|
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            356678999999999999999999999999987 6776347899999999999999999999986654 44

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=3.6e-16  Score=79.17  Aligned_cols=65  Identities=15%  Similarity=0.243  Sum_probs=56.7

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC--CCCceeccccccccCChHHHHHHH-HHhcCCCCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG--KEPSQMCLFCSYKCKHKTDIMHHM-RLKHKEFKI  100 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~--~~~~~~c~~c~~~f~~~~~l~~h~-~~h~~e~~~  100 (101)
                      .|.+++||.|..|++.|.....|..|+++|.+  ..++|.|..|++.|.....|..|+ +.|.++.+.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999985  256899999999999999999999 456666553

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=4.4e-17  Score=84.40  Aligned_cols=72  Identities=15%  Similarity=0.369  Sum_probs=62.3

Q ss_pred             cccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         27 KMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        27 ~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      ...+..+...|.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|++++.
T Consensus        19 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           19 SGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             HHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCC-CCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            34445566678888999999999999999999999999999 8889999999999999999999999999863

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=8.9e-16  Score=77.73  Aligned_cols=63  Identities=19%  Similarity=0.363  Sum_probs=57.5

Q ss_pred             CCCcccccCc--chhhccChHHHHHHhh-hhhCCCCceeccc--cccccCChHHHHHHHHHhcCCCCCC
Q psy10080         38 GKKTTWACPM--CRKIYAFKYNLMRHLR-VECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        38 ~~~~p~~C~~--c~~~~~~~~~l~~h~~-~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +++++|.|..  |++.|.....|..|++ .|.+ .++|.|..  |++.|.....|..|+++|+++++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            4567889886  9999999999999999 7999 88999998  9999999999999999999998874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.8e-16  Score=74.95  Aligned_cols=56  Identities=20%  Similarity=0.516  Sum_probs=52.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHH-HHhcCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHM-RLKHKE   97 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~-~~h~~e   97 (101)
                      +||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+ ++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            489999999999999999999999999 88999999999999999999997 678776

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.62  E-value=1.7e-16  Score=80.80  Aligned_cols=68  Identities=16%  Similarity=0.400  Sum_probs=60.2

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ..+..+...|.+++||.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+|
T Consensus        15 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           15 STLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG-EKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHT-CCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             hhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcC-CCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            3444556677788899999999999999999999999999 8889999999999999999999999986

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=7.1e-16  Score=80.72  Aligned_cols=63  Identities=24%  Similarity=0.529  Sum_probs=59.1

Q ss_pred             cCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         37 EGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        37 ~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +++++||.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   65 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERPF   65 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCCCCE
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCC-CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCc
Confidence            4667899999999999999999999999999 78899999999999999999999999998775

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.62  E-value=8.3e-17  Score=93.70  Aligned_cols=70  Identities=20%  Similarity=0.354  Sum_probs=49.4

Q ss_pred             ccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         30 VPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        30 ~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +..+...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|+|++||
T Consensus       121 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG-EKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC-CCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            34455566677788888888888888888888888887 66788888888888888888888888887775

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.5e-15  Score=75.88  Aligned_cols=63  Identities=22%  Similarity=0.469  Sum_probs=57.1

Q ss_pred             ceecccCCCcccccC--cchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         32 YNVDKEGKKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      +....+.+++||.|+  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+
T Consensus         9 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC-CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            444567788999997  599999999999999999999 889999999999999999999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=81.96  Aligned_cols=68  Identities=16%  Similarity=0.349  Sum_probs=54.3

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ..+..+...|.++++|.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|++.|+.
T Consensus        23 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           23 SQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG-IKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCC-CCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCC-CCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            3444556677777888888888888888888888888888 7778888888888888888888887764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.3e-15  Score=78.01  Aligned_cols=86  Identities=13%  Similarity=0.242  Sum_probs=67.2

Q ss_pred             cccccccCCCCCCCCCCCccccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCC-CCceeccccccccCChHH
Q psy10080          8 DDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGK-EPSQMCLFCSYKCKHKTD   86 (101)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~-~~~~~c~~c~~~f~~~~~   86 (101)
                      ...+.+..++.....    ...+..+...|.++++|.|..|++.|.....|..|++.|.++ .++|.|..|++.|.....
T Consensus         5 ~~~~~C~~C~~~f~~----~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            5 SSGVACEICGKIFRD----VYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CSCEECSSSCCEESS----SHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCeECCCCCCccCC----hHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            344555555443322    344455667888889999999999999999999999999883 278999999999999999


Q ss_pred             HHHHHH-HhcCC
Q psy10080         87 IMHHMR-LKHKE   97 (101)
Q Consensus        87 l~~h~~-~h~~e   97 (101)
                      |..|++ +|.++
T Consensus        81 L~~H~~~~H~~~   92 (95)
T 2yt9_A           81 LNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHTSCCC
T ss_pred             HHHHHHHhcCCC
Confidence            999986 77765

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=2e-15  Score=78.86  Aligned_cols=62  Identities=27%  Similarity=0.469  Sum_probs=57.7

Q ss_pred             CCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC--CCC
Q psy10080         38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE--FKI  100 (101)
Q Consensus        38 ~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e--~~~  100 (101)
                      .++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++  ++|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   66 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY   66 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCS-SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce
Confidence            467799999999999999999999999999 78899999999999999999999999987  665

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.58  E-value=6.5e-16  Score=83.65  Aligned_cols=73  Identities=19%  Similarity=0.318  Sum_probs=63.9

Q ss_pred             cccccceecccCCCcccccC--cchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         27 KMLVPYNVDKEGKKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        27 ~~~~~~~~~~~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ...+..+...|.+++||.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus        21 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (119)
T 2jp9_A           21 LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF   95 (119)
T ss_dssp             HHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCCE
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-CCCccCCccCchhCCHHHHHHHHHHhcCCCCe
Confidence            34445566678888899999  799999999999999999999 78899999999999999999999999998765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.57  E-value=4.2e-16  Score=88.07  Aligned_cols=73  Identities=25%  Similarity=0.458  Sum_probs=58.3

Q ss_pred             ccccceecccCCCcccccCc--chhhccChHHHHHHhhhhhCCCCceeccc--cccccCChHHHHHHHHHhcCCCCCC
Q psy10080         28 MLVPYNVDKEGKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ..+..+...|.+++||.|..  |++.|.....|..|+++|.+ .++|.|..  |++.|.....|..|+++|++++||+
T Consensus        76 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A           76 YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG-EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             HHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCS-SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             HHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCC-CCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            33445556677778888887  88888888888888888888 77788886  8888888888888888888887774

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.57  E-value=2.8e-15  Score=77.53  Aligned_cols=61  Identities=23%  Similarity=0.539  Sum_probs=55.8

Q ss_pred             CCcccccC--cchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         39 KKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        39 ~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +++||.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   63 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF   63 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            35799998  699999999999999999999 78899999999999999999999999998775

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.57  E-value=5e-15  Score=78.80  Aligned_cols=64  Identities=22%  Similarity=0.469  Sum_probs=59.0

Q ss_pred             cCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         37 EGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        37 ~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ...+++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   75 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK   75 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeE
Confidence            3456799999999999999999999999999 788999999999999999999999999998763

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.3e-15  Score=81.92  Aligned_cols=68  Identities=24%  Similarity=0.400  Sum_probs=37.3

Q ss_pred             ceecccCCCcccccCcchhhccChHHHHHHhhh---hhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         32 YNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRV---ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~---h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+...|.+++||.|..|++.|.....|..|+..   +.+ ..+|.|..|++.|.....|..|+++|+++++|
T Consensus        25 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (124)
T 2dlq_A           25 VHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS-EQVFTCSVCQETFRRRMELRLHMVSHTGEMPY   95 (124)
T ss_dssp             HHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             HHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            334455555556666666655555555555553   233 44555555555555555555555555555443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.2e-15  Score=80.47  Aligned_cols=68  Identities=16%  Similarity=0.212  Sum_probs=57.7

Q ss_pred             ccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHH-HhcCCCCCC
Q psy10080         30 VPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR-LKHKEFKIE  101 (101)
Q Consensus        30 ~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e~~~~  101 (101)
                      +..+...|  .+||.|..|++.|.....|..|+. |.+ .++|.|..|++.|.....|..|++ +|+++++|.
T Consensus        32 l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           32 QGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             HHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             HHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCC-CCCccCccccchhCCHHHHHHHHHHHcCCCCCCC
Confidence            33444445  468999999999999999999985 888 788999999999999999999997 898988763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.56  E-value=4.1e-15  Score=75.58  Aligned_cols=58  Identities=21%  Similarity=0.465  Sum_probs=55.1

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ||.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   58 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH   58 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-CCCEECSSSCCEESSHHHHHHHHHHHHTCCCE
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCC
Confidence            68999999999999999999999999 88999999999999999999999999998775

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=6.3e-15  Score=76.97  Aligned_cols=59  Identities=19%  Similarity=0.331  Sum_probs=54.6

Q ss_pred             ccccCcchhhccChHHHHHHhhh-hhCCCCc--------eeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRV-ECGKEPS--------QMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~-h~~~~~~--------~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .+.|..|++.|.....|..|++. |.+ .++        |.|..|++.|.....|..|+++|++++||+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTC-CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccC-CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            57899999999999999999998 888 666        899999999999999999999999998884

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=3.4e-15  Score=73.36  Aligned_cols=60  Identities=18%  Similarity=0.331  Sum_probs=54.6

Q ss_pred             CCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc-ccccccCChHHHHHHHHHhcCCCCC
Q psy10080         38 GKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL-FCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        38 ~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~-~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      -+++||.|..|++.|. .+.|..|+++ .+ .+||.|. .|++.|.....|..|+++|....++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~-~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP-RLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CS-SSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cC-CcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            4567999999999999 9999999998 88 8899999 9999999999999999999877653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.55  E-value=4.5e-15  Score=80.92  Aligned_cols=71  Identities=20%  Similarity=0.418  Sum_probs=45.6

Q ss_pred             cccceecccCCCcccccCc--chhhccChHHHHHHhhhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCCCC
Q psy10080         29 LVPYNVDKEGKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        29 ~~~~~~~~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+..+...|.+++||.|..  |++.|.....|..|+++|.+ .++|.|.  .|++.|.+...|..|+++|++++++
T Consensus        49 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           49 KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG-DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC-CCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            3344555666667777764  77777777777777777777 6667774  4777777777777777777777665

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.55  E-value=2.6e-15  Score=81.89  Aligned_cols=72  Identities=19%  Similarity=0.365  Sum_probs=63.6

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccc--cccccCChHHHHHHHHHhcCCCCCC
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ..+..+...| ++++|.|..|++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|+++|+++++|.
T Consensus        21 ~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           21 SAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV   94 (124)
T ss_dssp             HHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCC
T ss_pred             HHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceE
Confidence            3444556677 77899999999999999999999999999 88899985  9999999999999999999998763

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=1.3e-14  Score=74.92  Aligned_cols=56  Identities=21%  Similarity=0.494  Sum_probs=49.3

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ++||.|..|++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            3689999999999999999999999988 7789999999999999999999888874

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.4e-14  Score=77.28  Aligned_cols=65  Identities=17%  Similarity=0.265  Sum_probs=58.5

Q ss_pred             ceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         32 YNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .....|.+++||.|..|++.|.....|..|++.|..   +|.|..|++.|.....|..|++ |+++++|
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~---~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~   70 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSPELKQEHES-KCEYKKL   70 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHH---SBCCTTTCCCBSSHHHHHHHHH-HCSTGGG
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCCC---CccCCCCCCccCCHHHHHHHHH-cCCCCCc
Confidence            344567888999999999999999999999999864   7999999999999999999996 9998776

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.53  E-value=2.2e-15  Score=87.68  Aligned_cols=68  Identities=22%  Similarity=0.378  Sum_probs=47.7

Q ss_pred             ceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         32 YNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+...|.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  162 (190)
T 2i13_A           95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG-EKPYKCPECGKSFSREDNLHTHQRTHTGEKPY  162 (190)
T ss_dssp             HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCCCe
Confidence            344455556677777777777777777777777777 66677777777777777777777777776654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=76.15  Aligned_cols=68  Identities=18%  Similarity=0.342  Sum_probs=58.5

Q ss_pred             ccccceecccCCCcccccC--cchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcC
Q psy10080         28 MLVPYNVDKEGKKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ..+..+...|.++++|.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|++
T Consensus        31 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           31 SHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS-CCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            4445566678888899996  699999999999999999999 7789999999999999999999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=6.5e-15  Score=78.87  Aligned_cols=63  Identities=22%  Similarity=0.393  Sum_probs=59.3

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .|.+++||.| .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   66 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY   66 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTTCCCCCE
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCC-CcCccCCCCCcccCCHHHHHHHHHHcCCCCCe
Confidence            5778899999 999999999999999999999 78899999999999999999999999998775

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.4e-15  Score=82.10  Aligned_cols=52  Identities=17%  Similarity=0.191  Sum_probs=32.2

Q ss_pred             cCcchhhc--cChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         45 CPMCRKIY--AFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        45 C~~c~~~~--~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      |..|++.|  .....|..|+++|.+ .++|.|..|++.|.....|..|+++|+..
T Consensus        53 C~~C~~~f~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           53 DNNNPKRWSKPRKRSLLEMEGKEDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CCCCCSCCSSCCCCCCCCCCCSCCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             CCCCCcccccccHHHHHHHhhccCC-CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            55555554  444555555555555 55677777777777777777777766544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.50  E-value=1.2e-14  Score=74.91  Aligned_cols=68  Identities=18%  Similarity=0.317  Sum_probs=59.7

Q ss_pred             cccccceecccCCCcccccC--cchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         27 KMLVPYNVDKEGKKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        27 ~~~~~~~~~~~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ...+..+...|.+++||.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|.
T Consensus        20 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           20 SSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG-HRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            34455666788889999997  699999999999999999999 788999999999999999999998874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.49  E-value=1.4e-14  Score=79.58  Aligned_cols=59  Identities=20%  Similarity=0.499  Sum_probs=54.2

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .|.+++||.|..|++.|.....|..|+++|   .+||.|..|++.|.....|..|+++|+|.
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            466788999999999999999999999999   34799999999999999999999999885

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.46  E-value=1.1e-13  Score=74.82  Aligned_cols=62  Identities=23%  Similarity=0.361  Sum_probs=57.3

Q ss_pred             CCCcccccCc--chhhccChHHHHHHhhhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCCCC
Q psy10080         38 GKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        38 ~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+++||.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   67 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF   67 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCc
Confidence            4577999997  99999999999999999999 7889999  7999999999999999999998765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.46  E-value=1.8e-14  Score=68.08  Aligned_cols=52  Identities=13%  Similarity=0.131  Sum_probs=46.6

Q ss_pred             hhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         49 RKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        49 ~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ++.|.....|..|+++|.+ .++|.|..|++.|.....|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQS-EQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTS-SCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCC-CCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567777788889999999 889999999999999999999999999999984

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.46  E-value=3.1e-14  Score=80.20  Aligned_cols=74  Identities=27%  Similarity=0.464  Sum_probs=56.3

Q ss_pred             ccccccceecccCCCcccccCc--chhhccChHHHHHHhhhhhCCCCceeccc--cccccCChHHHHHHH-HHhcCCCCC
Q psy10080         26 EKMLVPYNVDKEGKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHM-RLKHKEFKI  100 (101)
Q Consensus        26 ~~~~~~~~~~~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~e~~~  100 (101)
                      ....+..+...|.+++||.|..  |++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|+ ++|+++++|
T Consensus        51 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~  129 (155)
T 2gli_A           51 AQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY  129 (155)
T ss_dssp             SHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCE
T ss_pred             hHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCe
Confidence            3344455566677777888874  88888888888888888887 67788887  888888888888887 778877665

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.8e-13  Score=74.39  Aligned_cols=61  Identities=23%  Similarity=0.464  Sum_probs=55.8

Q ss_pred             cCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHH-HhcCCC
Q psy10080         37 EGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR-LKHKEF   98 (101)
Q Consensus        37 ~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e~   98 (101)
                      +.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|++ .|.++.
T Consensus        61 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHSS-SCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            5677899999999999999999999999999 889999999999999999999997 566653

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.44  E-value=1.4e-13  Score=68.51  Aligned_cols=58  Identities=22%  Similarity=0.473  Sum_probs=52.0

Q ss_pred             ccCCCcccccCc--chhhccChHHHHHHhhhhhCCCCceeccc--cccccCChHHHHHHHHHh
Q psy10080         36 KEGKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        36 ~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h   94 (101)
                      .....++|.|..  |++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS-SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCC-CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345567999988  99999999999999999999 88999965  999999999999998765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.44  E-value=2.5e-13  Score=76.60  Aligned_cols=70  Identities=26%  Similarity=0.385  Sum_probs=60.4

Q ss_pred             cceecc-cCCCcc--------cccCcchhhccChHHHHHHhhhhhCCCCceeccc--cccccCChHHHHHHHHHhcCCCC
Q psy10080         31 PYNVDK-EGKKTT--------WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        31 ~~~~~~-~~~~~p--------~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      ..+... |.+..+        |.|..|++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|+++|+++++
T Consensus        42 ~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~  120 (155)
T 2rpc_A           42 VTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP  120 (155)
T ss_dssp             HHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS
T ss_pred             HHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            344443 666544        8999999999999999999999999 88899998  99999999999999999999987


Q ss_pred             CC
Q psy10080        100 IE  101 (101)
Q Consensus       100 ~~  101 (101)
                      |.
T Consensus       121 ~~  122 (155)
T 2rpc_A          121 FK  122 (155)
T ss_dssp             BC
T ss_pred             cc
Confidence            63

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.42  E-value=1.5e-13  Score=70.74  Aligned_cols=60  Identities=27%  Similarity=0.481  Sum_probs=55.6

Q ss_pred             CcccccCc--chhhccChHHHHHHhhhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCCCC
Q psy10080         40 KTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        40 ~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ..+|.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   66 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF   66 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            45899999  99999999999999999999 7889997  6999999999999999999999775

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.42  E-value=5.4e-13  Score=70.02  Aligned_cols=62  Identities=24%  Similarity=0.503  Sum_probs=56.4

Q ss_pred             CCcccccCc--chhhccChHHHHHHhhhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         39 KKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        39 ~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ..++|.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|+++|+++++|+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   77 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ   77 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCB
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeE
Confidence            356899996  99999999999999999999 7889996  69999999999999999999998763

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.41  E-value=3.8e-13  Score=68.55  Aligned_cols=62  Identities=26%  Similarity=0.461  Sum_probs=40.1

Q ss_pred             ccceecccCCCcccccCc--chhhccChHHHHHHhhhhhCCCCceeccc---cccccCChHHHHHHHHHhc
Q psy10080         30 VPYNVDKEGKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCLF---CSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        30 ~~~~~~~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~~---c~~~f~~~~~l~~h~~~h~   95 (101)
                      +..+...|.+++||.|..  |++.|.....|..|++.|.+    |.|..   |++.|.....|..|+++|+
T Consensus        19 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           19 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            334445566666677766  77777777777777666665    56666   7777777777777766653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.3e-13  Score=77.67  Aligned_cols=72  Identities=14%  Similarity=0.353  Sum_probs=63.2

Q ss_pred             CCccccccceecccCCCcccccCc--chhhccChHHHHHHh-hhhhCCCCceeccc--cccccCChHHHHHHHHHhcC
Q psy10080         24 DDEKMLVPYNVDKEGKKTTWACPM--CRKIYAFKYNLMRHL-RVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~p~~C~~--c~~~~~~~~~l~~h~-~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~   96 (101)
                      +.....+..+...|.+++||.|..  |++.|.....|..|+ +.|.+ .++|.|..  |++.|.....|..|+++|+|
T Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           79 YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN-EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS-CCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC-CCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            333445556677889999999998  999999999999998 78999 88999988  99999999999999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.40  E-value=2.7e-13  Score=78.82  Aligned_cols=70  Identities=16%  Similarity=0.248  Sum_probs=38.2

Q ss_pred             cceecccCCCcccccC--cchhhccChHHHHHHh-hhhhCCCCceec--cccccccCChHHHHHHHHHhcCCCCC
Q psy10080         31 PYNVDKEGKKTTWACP--MCRKIYAFKYNLMRHL-RVECGKEPSQMC--LFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~--~c~~~~~~~~~l~~h~-~~h~~~~~~~~c--~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ..+...|.+++||.|.  .|++.|.....|..|+ +.|.....+|.|  ..|++.|.....|..|+++|+++++|
T Consensus        61 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~  135 (190)
T 1tf6_A           61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY  135 (190)
T ss_dssp             HHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSS
T ss_pred             HHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCc
Confidence            3444455555556665  5666666555565555 444211445555  55666666666666666666555544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=2.5e-13  Score=64.10  Aligned_cols=48  Identities=17%  Similarity=0.290  Sum_probs=43.6

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhh-hhhCCCCceeccccccccCC
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLR-VECGKEPSQMCLFCSYKCKH   83 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~-~h~~~~~~~~c~~c~~~f~~   83 (101)
                      ..+.+++||.|..|++.|.....|..|++ +|.+ .++|.|..|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCCCC
Confidence            35677889999999999999999999987 8999 889999999999975

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.9e-15  Score=74.59  Aligned_cols=64  Identities=13%  Similarity=0.159  Sum_probs=55.7

Q ss_pred             ccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         30 VPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        30 ~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +..+...|.+++||.|..|++.|.....|..        .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCC
Confidence            4456678999999999999999998877654        447999999999999999999999999998874

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1e-12  Score=59.84  Aligned_cols=44  Identities=25%  Similarity=0.292  Sum_probs=37.9

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG-EKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS-CCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            44578888899999999999999999999999998 778888876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=8e-13  Score=59.65  Aligned_cols=43  Identities=16%  Similarity=0.257  Sum_probs=33.7

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .++|.|..|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS-SCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3467777888888888888888888888888888 667877765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=8.3e-13  Score=60.14  Aligned_cols=44  Identities=20%  Similarity=0.315  Sum_probs=37.0

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC-CCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC-CCCCCCCCC
Confidence            45577888899999999999999999999988988 778888776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.35  E-value=9.8e-13  Score=59.89  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=37.0

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS-SSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC-CCCcCCCCC
Confidence            45577888899999999999999999999988888 778888776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.35  E-value=8e-13  Score=60.22  Aligned_cols=44  Identities=16%  Similarity=0.193  Sum_probs=35.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +..+|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC-CSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45567788888888888888888888888888888 777888766

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.9e-13  Score=60.04  Aligned_cols=44  Identities=16%  Similarity=0.207  Sum_probs=35.4

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC-CSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 777888765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.3e-13  Score=59.97  Aligned_cols=44  Identities=18%  Similarity=0.361  Sum_probs=35.0

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +..+|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC-SSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34567778888888888888888888888888888 677888765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.4e-13  Score=59.99  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=35.0

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS-TTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            34567778888888888888888888888888888 677888765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.34  E-value=1.1e-12  Score=59.82  Aligned_cols=44  Identities=20%  Similarity=0.324  Sum_probs=33.9

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS-CCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888887 667877765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.2e-13  Score=59.98  Aligned_cols=44  Identities=16%  Similarity=0.325  Sum_probs=35.1

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS-CCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC-CCCCCCCCC
Confidence            44567778888888888888888888888888888 677888765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.34  E-value=9.8e-13  Score=59.90  Aligned_cols=44  Identities=16%  Similarity=0.296  Sum_probs=35.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC-CCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 678888765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1e-12  Score=59.82  Aligned_cols=44  Identities=23%  Similarity=0.381  Sum_probs=34.1

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT-SCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888888 677877765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.7e-13  Score=60.05  Aligned_cols=44  Identities=18%  Similarity=0.253  Sum_probs=33.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC-CCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567777788888888888888888888888887 667777765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.1e-12  Score=59.77  Aligned_cols=44  Identities=14%  Similarity=0.198  Sum_probs=36.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS-CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567788899999999999999999999888888 778888776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.9e-13  Score=60.07  Aligned_cols=44  Identities=18%  Similarity=0.244  Sum_probs=35.8

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC-SSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            44567788888888888888888888888888888 778888765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.9e-13  Score=59.85  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=34.3

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS-SSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888887 677877765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.3e-12  Score=59.46  Aligned_cols=44  Identities=18%  Similarity=0.265  Sum_probs=34.5

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC-CSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888888 677887765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1e-12  Score=59.84  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=36.8

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTT-CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34577888899999999999999999999888888 778888776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.33  E-value=9.2e-13  Score=59.95  Aligned_cols=44  Identities=18%  Similarity=0.279  Sum_probs=36.4

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS-CCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567888889999999999988889889888888 778888766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9.8e-13  Score=59.90  Aligned_cols=44  Identities=20%  Similarity=0.312  Sum_probs=36.8

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS-CCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            44577888899999999999999999999888888 778888776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=59.80  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=36.2

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ++..|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT-CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 778888766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.1e-12  Score=59.73  Aligned_cols=44  Identities=14%  Similarity=0.232  Sum_probs=34.3

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG-QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC-CSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            44567777888888888888888888888888888 677877765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=59.77  Aligned_cols=44  Identities=16%  Similarity=0.273  Sum_probs=35.5

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG-VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC-CCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567778888888888888888888888888888 677888766

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=59.54  Aligned_cols=44  Identities=16%  Similarity=0.225  Sum_probs=34.1

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC-CCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888888 667877765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9e-13  Score=60.02  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=35.4

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC-CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 677888766

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=59.62  Aligned_cols=44  Identities=18%  Similarity=0.333  Sum_probs=33.4

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS-SSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC-CCCCCCCCC
Confidence            34567777788888888888888888888888887 667777765

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.3e-13  Score=74.25  Aligned_cols=73  Identities=8%  Similarity=0.054  Sum_probs=62.7

Q ss_pred             cccceecccCCCcccccCcchhhccChHHHHHHhhh--hhCCCCceecccccccc--CChHHHHHHHHHhcCCCCCC
Q psy10080         29 LVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRV--ECGKEPSQMCLFCSYKC--KHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        29 ~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~--h~~~~~~~~c~~c~~~f--~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .+..+...|.+++||.|..|++.|.....|..|++.  |.++...+.|..|++.|  .....|..|+++|++++||+
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            344566789999999999999999999999999998  76634445699999999  89999999999999998873

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.33  E-value=1.3e-12  Score=59.42  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=37.1

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG-EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS-CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            45578888899999999999999999999988988 778888776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=59.79  Aligned_cols=44  Identities=20%  Similarity=0.314  Sum_probs=36.5

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +..+|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT-CSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            44577888889999999999988889999888888 778888776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=59.60  Aligned_cols=44  Identities=20%  Similarity=0.320  Sum_probs=35.9

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT-SCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 778888765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-12  Score=59.45  Aligned_cols=44  Identities=18%  Similarity=0.222  Sum_probs=33.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC-CCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567777788888888888888888888888887 667777765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.1e-12  Score=59.71  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=35.8

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC-SCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 777888766

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.4e-12  Score=59.37  Aligned_cols=44  Identities=23%  Similarity=0.246  Sum_probs=36.2

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC-CCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            34567788888898898888888888888888888 778888766

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.7e-13  Score=59.91  Aligned_cols=43  Identities=19%  Similarity=0.280  Sum_probs=34.4

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC-CCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            4567778888888888888888888888888888 677888765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.3e-12  Score=59.52  Aligned_cols=44  Identities=16%  Similarity=0.178  Sum_probs=34.1

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCC-SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567777888888888888888888888888887 677877765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.2e-12  Score=59.68  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=35.3

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC-SCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567778888888888888888888888888888 777888766

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=59.23  Aligned_cols=44  Identities=20%  Similarity=0.390  Sum_probs=34.5

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC-CSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888888 667887765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.32  E-value=1.5e-12  Score=59.25  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=35.2

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-EKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567778888888888888888888888888888 777888765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.32  E-value=5.8e-13  Score=67.88  Aligned_cols=54  Identities=15%  Similarity=0.318  Sum_probs=51.5

Q ss_pred             cccc--CcchhhccChHHHHHHhhhhhCCCCceeccc--cccccCChHHHHHHHHHhcC
Q psy10080         42 TWAC--PMCRKIYAFKYNLMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        42 p~~C--~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ||.|  ..|++.|.....|..|+++|.+ .++|.|..  |++.|.....|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6889  8999999999999999999999 78999988  99999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.2e-12  Score=59.60  Aligned_cols=43  Identities=19%  Similarity=0.287  Sum_probs=32.3

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS-CCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            4466777788888888888888888888777777 667777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-12  Score=59.53  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=34.3

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +..+|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS-CCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567777888888888888888888888888888 677877765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.4e-12  Score=59.34  Aligned_cols=43  Identities=14%  Similarity=0.307  Sum_probs=29.3

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK-QKPSGPSSG   46 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC-CCCSSCSCC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3456666777777777777777777777777776 566666654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.1e-12  Score=59.73  Aligned_cols=44  Identities=23%  Similarity=0.314  Sum_probs=37.8

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS-CCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            44577888899999999999999999999999998 778888876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=1.6e-12  Score=58.89  Aligned_cols=43  Identities=16%  Similarity=0.324  Sum_probs=38.1

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccc
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCS   78 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~   78 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+ .++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-SVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSC-CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccC-CCCCCCcCCC
Confidence            357788899999999999999999999999999 7789998885

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.3e-12  Score=59.41  Aligned_cols=44  Identities=16%  Similarity=0.243  Sum_probs=33.2

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS-CCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567777788888888888888888888888877 667777765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.5e-12  Score=59.24  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=35.5

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC-CCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567788888888888888888888888888888 678888766

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.30  E-value=1.5e-12  Score=75.60  Aligned_cols=73  Identities=21%  Similarity=0.331  Sum_probs=60.7

Q ss_pred             cccccceecccCCCccccc--CcchhhccChHHHHHHhhhhhCCCCceecc--ccccccCChHHHHHHH-HHh-cCCCCC
Q psy10080         27 KMLVPYNVDKEGKKTTWAC--PMCRKIYAFKYNLMRHLRVECGKEPSQMCL--FCSYKCKHKTDIMHHM-RLK-HKEFKI  100 (101)
Q Consensus        27 ~~~~~~~~~~~~~~~p~~C--~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~-~~h-~~e~~~  100 (101)
                      ...+..+...|.+++||.|  ..|++.|.....|..|+++|.+ .++|.|.  .|++.|.....|..|+ +.| .++++|
T Consensus        27 ~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~  105 (190)
T 1tf6_A           27 NWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG-EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVY  105 (190)
T ss_dssp             HHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT-CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCC
T ss_pred             HHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC-CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCccee
Confidence            3445566677888899999  8899999999999999999999 7789999  8999999999999999 556 345554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.6e-12  Score=59.18  Aligned_cols=44  Identities=20%  Similarity=0.257  Sum_probs=34.4

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC-SCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567777888888888888888888888888888 667877765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.2e-12  Score=59.64  Aligned_cols=44  Identities=25%  Similarity=0.320  Sum_probs=35.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS-CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC-CCCCCCCCC
Confidence            44567788888888888888888888888888888 777888766

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.3e-12  Score=58.79  Aligned_cols=44  Identities=23%  Similarity=0.310  Sum_probs=36.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhh-hhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLR-VECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~-~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|...+.|..|++ +|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            4557788888999999999999999999988 8888 778888766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.1e-12  Score=58.79  Aligned_cols=44  Identities=18%  Similarity=0.311  Sum_probs=32.9

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT-SCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34567777788888888888888888888888877 667777653

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.9e-12  Score=57.73  Aligned_cols=37  Identities=14%  Similarity=0.265  Sum_probs=18.0

Q ss_pred             hhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         63 RVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        63 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ++|.+ .++|.|..|++.|.....|..|+++|++++||
T Consensus         3 ~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            3 SGSSG-EKPYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             SSSCS-CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             cCcCC-CCCeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            33444 44455555555555555555555555554444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2e-12  Score=58.86  Aligned_cols=41  Identities=22%  Similarity=0.306  Sum_probs=26.6

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em4_A            4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS-SSCCCCC
T ss_pred             ccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            3456666666666666666666666666666666 5566654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=2.2e-12  Score=59.34  Aligned_cols=43  Identities=28%  Similarity=0.345  Sum_probs=39.2

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      .+.+++||.|..|++.|.....|..|+++|.+ .+||.|..|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSG-EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCS-CCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCC-CCCccCCCCCC
Confidence            46677899999999999999999999999999 78999999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.29  E-value=1.7e-12  Score=57.94  Aligned_cols=38  Identities=24%  Similarity=0.489  Sum_probs=18.9

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      .|.+++||.|..|++.|...+.|..|+++|.+ .++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAG-ESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCC-CCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCC-CCCCCC
Confidence            34444555555555555555555555555554 444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.6e-12  Score=58.46  Aligned_cols=43  Identities=16%  Similarity=0.217  Sum_probs=37.5

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR-EKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH-CCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3467888899999999999999999999999998 778988876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.6e-12  Score=58.46  Aligned_cols=41  Identities=15%  Similarity=0.310  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTG-EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSS-CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCC-CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999 889999999999999999999999999998874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.27  E-value=2e-12  Score=58.84  Aligned_cols=42  Identities=19%  Similarity=0.356  Sum_probs=28.1

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT-SCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            34456666677777777777777777777777776 5566664

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.27  E-value=2.2e-12  Score=58.74  Aligned_cols=41  Identities=20%  Similarity=0.259  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTG-EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSS-SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCC-CCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            46788898 889999999999999999999999999998874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.8e-12  Score=57.91  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=30.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLF   76 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~   76 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC-CCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            34466677777777777777777777777777777 66677654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.2e-12  Score=58.64  Aligned_cols=41  Identities=17%  Similarity=0.258  Sum_probs=26.5

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG-EKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC-CSCSCTT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC-CCCCCCC
Confidence            3456666666666666666666666666666666 5566654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.3e-12  Score=58.60  Aligned_cols=41  Identities=20%  Similarity=0.364  Sum_probs=25.6

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC-CCCCCSC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3455566666666666666666666666666666 5556554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.9e-12  Score=58.92  Aligned_cols=41  Identities=22%  Similarity=0.373  Sum_probs=24.5

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-ETLSGPS   44 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS-CCSSSCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3455556666666666666666666666666666 5555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.2e-12  Score=58.73  Aligned_cols=41  Identities=20%  Similarity=0.254  Sum_probs=25.1

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC-CCBTTTB
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCC-CCCCCCC
Confidence            3455566666666666666666666666666666 5556554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.5e-12  Score=58.52  Aligned_cols=41  Identities=20%  Similarity=0.207  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTG-ENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCS-SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCC-CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.4e-12  Score=57.95  Aligned_cols=39  Identities=23%  Similarity=0.253  Sum_probs=19.8

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A            3 SGSSGTG-EKPYECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             CSSCCSC-CCSEECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             CccCCCC-CCCeECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            3444444 44455555555555555555555555555444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.5e-12  Score=58.53  Aligned_cols=41  Identities=29%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG-ERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS-CCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3456666667777777766666666666666666 5566554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.26  E-value=3.1e-12  Score=57.00  Aligned_cols=38  Identities=16%  Similarity=0.192  Sum_probs=22.6

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +++|.+ .++|.|..|++.|.....|..|+++|++++||
T Consensus         3 ~~~H~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            3 SGSSGG-ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CSCCCS-SCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CccCCC-CCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            344555 55566666666666666666666666666555

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.2e-12  Score=57.61  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=36.4

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|....+|..|+++|++++||+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSG-EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSS-CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCC-CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4677888 789999999999999999999999999998874

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.9e-12  Score=58.28  Aligned_cols=41  Identities=17%  Similarity=0.257  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            2 SSGSSGTG-ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSC-CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CCcCCcCC-CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47788998 889999999999999999999999999998874

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.8e-12  Score=58.31  Aligned_cols=41  Identities=17%  Similarity=0.232  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSG-EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSS-SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCC-CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.8e-12  Score=57.88  Aligned_cols=43  Identities=19%  Similarity=0.335  Sum_probs=35.7

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSS-SCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            3467788889999999999988889999888888 778888766

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.2e-12  Score=58.75  Aligned_cols=41  Identities=15%  Similarity=0.247  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoo_A            2 SSGSSGSG-ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG   42 (46)
T ss_dssp             CCCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSC
T ss_pred             CCCCCCCC-CCCEEccccCcccCCHHHHHHHHHHHcCCCCCC
Confidence            47788999 889999999999999999999999999998874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=57.77  Aligned_cols=38  Identities=13%  Similarity=0.162  Sum_probs=19.0

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +++|.+ .+||.|..|++.|.+...|..|+++|++++||
T Consensus         3 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            3 SGSSGG-EKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCS-SCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CcccCC-CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            334444 44455555555555555555555555555444

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.2e-12  Score=58.14  Aligned_cols=39  Identities=15%  Similarity=0.218  Sum_probs=21.0

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      |+++|.+ .+||.|..|++.|.....|..|+++|+++++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            3 SGSSGAG-ENPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CSCCCSC-CCSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CccccCC-CCCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            3444555 44555555555555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.3e-12  Score=58.61  Aligned_cols=41  Identities=15%  Similarity=0.340  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            2 SSGSSGTG-ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCSC-CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCC-CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47788998 889999999999999999999999999998874

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=58.94  Aligned_cols=41  Identities=15%  Similarity=0.263  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTG-EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSC-CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999 889999999999999999999999999998874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.8e-12  Score=58.34  Aligned_cols=41  Identities=17%  Similarity=0.245  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep2_A            2 SSGSSGTG-EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG   42 (46)
T ss_dssp             CSSSCSSC-CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCC
T ss_pred             CCCCCCCC-CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=58.48  Aligned_cols=41  Identities=15%  Similarity=0.124  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            2 SSGSSGTG-VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSC-CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             CcccccCC-CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999 889999999999999999999999999998874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.8e-12  Score=59.00  Aligned_cols=41  Identities=24%  Similarity=0.378  Sum_probs=28.9

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC-CCCCSSC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            4456667777777777777777777777777777 6667664

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.8e-12  Score=58.31  Aligned_cols=41  Identities=20%  Similarity=0.192  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            2 SSGSSGTG-EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSC-CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CCcccCCC-CCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            47788999 789999999999999999999999999998874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=58.62  Aligned_cols=41  Identities=22%  Similarity=0.307  Sum_probs=29.0

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-ENPSGPS   44 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS-SCCCSSS
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            4456667777777777777777777777777777 5667664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=58.03  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=28.5

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS-SCCCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            4456667777777777777777777777777777 5666664

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.4e-12  Score=58.06  Aligned_cols=41  Identities=17%  Similarity=0.180  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            2 SSGSSGSG-EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CCccccCC-CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.4e-12  Score=58.57  Aligned_cols=41  Identities=17%  Similarity=0.264  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eml_A            2 SSGSSGTG-EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG   42 (46)
T ss_dssp             CCCCCCSS-CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSC
T ss_pred             CccCCcCC-CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCC
Confidence            46788999 889999999999999999999999999998874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.1e-12  Score=58.19  Aligned_cols=38  Identities=24%  Similarity=0.406  Sum_probs=19.1

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      .|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2en7_A            6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-ESGPSS   43 (44)
T ss_dssp             CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC-SSSSCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHhhhcCC-CCCCCC
Confidence            44444555555555555555555555555554 444443

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=58.42  Aligned_cols=41  Identities=24%  Similarity=0.386  Sum_probs=26.0

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG-EKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS-SSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3455666666666666666666666666666666 5566554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.2e-12  Score=58.16  Aligned_cols=41  Identities=15%  Similarity=0.156  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            2 SSGSSGTG-EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCCSSS-SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCC-CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            46788888 789999999999999999999999999998874

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.9e-12  Score=57.81  Aligned_cols=41  Identities=17%  Similarity=0.165  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            2 SSGSSGTG-EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCCSS-CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCC-CCCccCCccChhhCCHHHHHHHHHhcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.9e-12  Score=58.26  Aligned_cols=41  Identities=22%  Similarity=0.312  Sum_probs=27.4

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG-EKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS-CCCCSCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC-CCCCCCC
Confidence            3456666677777777777777777777777766 5566654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.25  E-value=2.6e-12  Score=58.45  Aligned_cols=41  Identities=15%  Similarity=0.199  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTG-EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTT-SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCC-CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=58.64  Aligned_cols=42  Identities=19%  Similarity=0.370  Sum_probs=31.0

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT-SSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC-CCCCCCC
Confidence            34567777778888888888877777778777777 6677765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.4e-12  Score=57.56  Aligned_cols=39  Identities=18%  Similarity=0.103  Sum_probs=22.2

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      |+++|.+ .++|.|..|++.|.+...|..|+++|++++||
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            3 SGSSGSG-EKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCC-CCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCcccCC-CcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            4445555 45555666666666666666666556555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=58.69  Aligned_cols=42  Identities=24%  Similarity=0.352  Sum_probs=31.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC-CCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            34567777788888888888888888888878877 6677765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.8e-12  Score=57.57  Aligned_cols=41  Identities=17%  Similarity=0.265  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            2 SSGSSGSG-EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCCC-CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCC-CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36788888 889999999999999999999999999998874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.24  E-value=3.7e-12  Score=57.95  Aligned_cols=41  Identities=17%  Similarity=0.220  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            2 SSGSSGTG-EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCC-CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCC-CCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36788998 889999999999999999999999999998874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.7e-12  Score=58.39  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoe_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG   42 (46)
T ss_dssp             CCSSCCCC-CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCS
T ss_pred             CCCCCCCC-CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            46788898 889999999999999999999999999998874

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-12  Score=58.57  Aligned_cols=41  Identities=22%  Similarity=0.323  Sum_probs=29.1

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS-SCCCCTT
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            4456677777777777777777777777777777 6667664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.1e-12  Score=58.52  Aligned_cols=38  Identities=26%  Similarity=0.534  Sum_probs=20.5

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      .|.+++||.|..|++.|...+.|..|+++|.+ .+||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            44555555555555555555555555555555 444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=7.7e-12  Score=56.88  Aligned_cols=41  Identities=17%  Similarity=0.202  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTG-EKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCC-CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCC-CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.5e-12  Score=57.34  Aligned_cols=40  Identities=15%  Similarity=0.114  Sum_probs=37.0

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            3 SGSSGSR-EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CSCCSSC-CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             cccccCC-CCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            6778888 789999999999999999999999999998874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=57.46  Aligned_cols=37  Identities=19%  Similarity=0.358  Sum_probs=18.7

Q ss_pred             hhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         63 RVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        63 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ++|.+ .++|.|..|++.|.....|..|+++|++++||
T Consensus         4 ~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            4 GSSGG-EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             SCCSS-SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             cccCC-CCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            34444 44455555555555555555555555555444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.2e-12  Score=57.71  Aligned_cols=41  Identities=20%  Similarity=0.342  Sum_probs=28.8

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C~   44 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS-CCCSSST
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC-CCCCCCC
Confidence            4456667777777777777777777777777777 5667664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-12  Score=58.57  Aligned_cols=42  Identities=21%  Similarity=0.330  Sum_probs=31.9

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT-CCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            34567777788888888888888888888888887 6677765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-12  Score=58.17  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|+++++|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTG-EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCC-CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCC-CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 789999999999999999999999999998874

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=58.22  Aligned_cols=41  Identities=15%  Similarity=0.190  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            2 SSGSSGTG-EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCCTTC-CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCCcCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=8.1e-12  Score=56.79  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTG-QRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCC-SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            36788998 889999999999999999999999999999885

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-12  Score=58.21  Aligned_cols=41  Identities=15%  Similarity=0.167  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            2 SSGSSGTG-GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSS-SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             ccccccCC-CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=6e-12  Score=56.71  Aligned_cols=38  Identities=29%  Similarity=0.473  Sum_probs=18.5

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      .|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAG-ESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT-SCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCC-CCCCCC
Confidence            34444455555555555555555555555544 444443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=2.5e-12  Score=58.50  Aligned_cols=41  Identities=15%  Similarity=0.138  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            2 SSGSSGMG-EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCCSCC-CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CCcCccCC-CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcC
Confidence            47788998 889999999999999999999999999998874

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.8e-12  Score=58.33  Aligned_cols=41  Identities=20%  Similarity=0.138  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            2 SSGSSGSG-EKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCCC-CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             CccccCCC-CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.6e-12  Score=58.43  Aligned_cols=41  Identities=12%  Similarity=0.150  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            2 SSGSSGTG-KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSC-CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCCcCCCC-CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            46788898 889999999999999999999999999998874

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.5e-12  Score=58.47  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=30.5

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS-CCSSCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC-CCCcCCC
Confidence            4566777778888888888777777777777777 6677665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=58.01  Aligned_cols=42  Identities=21%  Similarity=0.419  Sum_probs=29.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG-ERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC-CCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            34456667777777777777777777777777777 6667664

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=2.3e-12  Score=58.61  Aligned_cols=41  Identities=15%  Similarity=0.117  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            2 SSGSSGTG-VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             ccccCCCC-CCceECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=58.20  Aligned_cols=41  Identities=17%  Similarity=0.261  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTG-EKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCC-CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCC-CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788998 889999999999999999999999999998874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=57.53  Aligned_cols=39  Identities=18%  Similarity=0.440  Sum_probs=20.8

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+ .++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSG-QSGPSS   43 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS-SCSCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC-CCCCCC
Confidence            345555555555555555555555555555555 444544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.9e-12  Score=57.48  Aligned_cols=41  Identities=17%  Similarity=0.315  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eme_A            2 SSGSSGSG-EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCC-CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCS
T ss_pred             CCCCCCCC-CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCC
Confidence            47788999 889999999999999999999999999998874

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.5e-12  Score=57.63  Aligned_cols=41  Identities=20%  Similarity=0.159  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~h~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            2 SSGSSGSG-EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCS-SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCC-CcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            46778898 889999999999999999999999999998874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.7e-12  Score=58.41  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=30.3

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC-SCCSSTT
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC-CCCCCCC
Confidence            4566777777777777777777777777777777 6677665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.9e-12  Score=57.85  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            2 SSGSSGTG-EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCC-SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             CcccCCCC-CCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3e-12  Score=58.22  Aligned_cols=41  Identities=27%  Similarity=0.393  Sum_probs=28.9

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS-CCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            4456667777777777777777777777777777 5667664

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=58.29  Aligned_cols=42  Identities=19%  Similarity=0.292  Sum_probs=30.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC-SCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            34566777777777777777777777777777777 6677664

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1e-11  Score=56.43  Aligned_cols=41  Identities=15%  Similarity=0.188  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCC-CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCC-CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1e-11  Score=56.39  Aligned_cols=41  Identities=15%  Similarity=0.186  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTG-GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSS-SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=6.3e-12  Score=57.13  Aligned_cols=41  Identities=17%  Similarity=0.126  Sum_probs=37.2

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            2 SSGSSGSG-EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CCSSCCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCC-CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            36778888 889999999999999999999999999998874

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4e-12  Score=57.80  Aligned_cols=41  Identities=17%  Similarity=0.213  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            2 SSGSSGTG-EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCC-CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCCcCC-CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            36788898 789999999999999999999999999998874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3e-12  Score=58.29  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=30.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +..+|.+++||.|..|++.|.....|..|+++|.+ .++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR-EKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH-TTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            34567777777777777777777777777777777 6667664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=2.9e-12  Score=64.56  Aligned_cols=55  Identities=18%  Similarity=0.478  Sum_probs=47.8

Q ss_pred             cccccceec-ccCCCcccccCc--chhhccChHHHHHHhhhhhCCCCceeccccccccC
Q psy10080         27 KMLVPYNVD-KEGKKTTWACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK   82 (101)
Q Consensus        27 ~~~~~~~~~-~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   82 (101)
                      ...+..+.. .|.+++||.|..  |++.|.....|..|+++|.+ .++|.|..|++.|.
T Consensus        22 ~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           22 RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCCSSSCCCC
T ss_pred             HHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC-CCCeeCCCCCCCCC
Confidence            344445555 788899999999  99999999999999999999 88999999999883

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=58.40  Aligned_cols=41  Identities=15%  Similarity=0.172  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCCC-CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             CcCcCCCC-CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            46788898 889999999999999999999999999998874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=56.18  Aligned_cols=41  Identities=15%  Similarity=0.169  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAG-KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCS-SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCC-CCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36778888 889999999999999999999999999998874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.5e-12  Score=58.51  Aligned_cols=41  Identities=15%  Similarity=0.279  Sum_probs=28.2

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3456667777777777777777777777777777 5566654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.5e-12  Score=58.05  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            2 SSGSSGSS-TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCC-SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCC-CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.4e-12  Score=57.50  Aligned_cols=39  Identities=10%  Similarity=0.457  Sum_probs=21.4

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA-KSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC-CCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCC
Confidence            345555555555555555555555555555555 444544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=4.9e-12  Score=57.53  Aligned_cols=41  Identities=17%  Similarity=0.221  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            2 SSGSSGAG-VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             CSCCSSCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36778888 889999999999999999999999999998874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.4e-12  Score=56.75  Aligned_cols=41  Identities=20%  Similarity=0.245  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTG-ERHYECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCC-CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCC-CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=57.48  Aligned_cols=41  Identities=22%  Similarity=0.226  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            2 SSGSSGAG-EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CCSSCSSC-CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCCcCcCC-CCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            36788898 889999999999999999999999999998874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.7e-12  Score=57.98  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=31.1

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-ERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS-CCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC-CCCCCCC
Confidence            4567777788888888888888888888877877 6677765

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.5e-11  Score=55.84  Aligned_cols=41  Identities=17%  Similarity=0.240  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSG-EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCC-SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCC-CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            46788888 789999999999999999999999999998874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.1e-11  Score=56.29  Aligned_cols=41  Identities=15%  Similarity=0.155  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTG-EKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCC-CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCC-CCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.3e-12  Score=57.21  Aligned_cols=40  Identities=18%  Similarity=0.240  Sum_probs=36.8

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            3 SGSSGTG-EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             SCCCCSS-CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCC-CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            6778888 789999999999999999999999999998874

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.9e-12  Score=57.82  Aligned_cols=41  Identities=17%  Similarity=0.227  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            2 SSGSSGTG-EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSCCCSS-CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCCcCCCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            46788999 889999999999999999999999999998874

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.6e-12  Score=57.61  Aligned_cols=41  Identities=17%  Similarity=0.160  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            2 SSGSSGTG-EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSC-CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCCC-CcCccCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            36778888 789999999999999999999999999998874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=57.88  Aligned_cols=39  Identities=15%  Similarity=0.434  Sum_probs=20.5

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR-KSGPSS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC-CCCCSC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCC-CCCCCC
Confidence            344555555555555555555555555555555 444443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5e-12  Score=57.52  Aligned_cols=41  Identities=15%  Similarity=0.113  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            2 SSGSSGSV-EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCCSCCCC-CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCC-CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCC
Confidence            36778888 889999999999999999999999999998874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.2e-11  Score=56.21  Aligned_cols=41  Identities=20%  Similarity=0.249  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTG-EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSS-CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.2e-11  Score=56.16  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTG-EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSC-CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCC-CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            36788888 889999999999999999999999999998874

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.7e-12  Score=57.56  Aligned_cols=41  Identities=17%  Similarity=0.241  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en1_A            2 SSGSSGSG-EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CSTTCCCC-CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSC
T ss_pred             CcccCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47788999 889999999999999999999999999998874

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.20  E-value=1.3e-11  Score=55.01  Aligned_cols=40  Identities=20%  Similarity=0.238  Sum_probs=36.5

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.+...|..|+++|++++||+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSG-ENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSS-CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCC-CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            4677888 789999999999999999999999999998874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=57.81  Aligned_cols=41  Identities=15%  Similarity=0.322  Sum_probs=27.8

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-KKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC-CCCCCSC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            4456666677777777777777777777777776 5566664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.5e-11  Score=55.78  Aligned_cols=41  Identities=20%  Similarity=0.210  Sum_probs=37.6

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTG-EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSS-CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCC-CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47788998 889999999999999999999999999998874

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=56.13  Aligned_cols=41  Identities=20%  Similarity=0.251  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTG-EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCS-CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCC-CcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            46788888 889999999999999999999999999998874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=56.29  Aligned_cols=41  Identities=15%  Similarity=0.169  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSC-CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCC-CcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            46778888 889999999999999999999999999998874

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8e-12  Score=56.81  Aligned_cols=40  Identities=23%  Similarity=0.284  Sum_probs=36.8

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            3 SGSSGSG-EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCS-CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCC-CCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            5778888 889999999999999999999999999998874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.20  E-value=1.6e-12  Score=63.02  Aligned_cols=52  Identities=12%  Similarity=0.316  Sum_probs=44.4

Q ss_pred             ceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHH
Q psy10080         32 YNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDI   87 (101)
Q Consensus        32 ~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l   87 (101)
                      .+...|.+++||.|+.|++.|.....|.   ++|.+ .+||.|..|++.|....++
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccccCccc
Confidence            4566789999999999999999888775   78998 7899999999999866544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=56.09  Aligned_cols=41  Identities=15%  Similarity=0.144  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            2 SSGSSGSG-KKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCCSCCC-SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36788888 789999999999999999999999999998874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=56.14  Aligned_cols=41  Identities=22%  Similarity=0.319  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTG-ENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCS-CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCC-CCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 789999999999999999999999999998874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=56.32  Aligned_cols=40  Identities=15%  Similarity=0.247  Sum_probs=36.9

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            3 SGSSGTG-EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CSSSCSS-CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCC-CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            6778888 889999999999999999999999999998874

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=5.9e-12  Score=57.18  Aligned_cols=41  Identities=17%  Similarity=0.224  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            2 SSGSSGTG-EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             CSCCSCCC-CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCC-CcCeECCccccccCChHHHHHHHHHhCCCCCCC
Confidence            36788998 889999999999999999999999999998874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.9e-12  Score=57.53  Aligned_cols=41  Identities=24%  Similarity=0.453  Sum_probs=31.1

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ...|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC-SCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3467777788888888888888888888888877 6677765

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.5e-11  Score=55.89  Aligned_cols=41  Identities=17%  Similarity=0.240  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMG-EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCC-CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=55.91  Aligned_cols=41  Identities=20%  Similarity=0.212  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTG-ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSS-CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCC-CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=55.92  Aligned_cols=41  Identities=15%  Similarity=0.189  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTG-EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCC-SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCC-CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=56.05  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTG-EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCC-CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.19  E-value=1.5e-11  Score=54.69  Aligned_cols=41  Identities=20%  Similarity=0.305  Sum_probs=36.9

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            34578889999999999999999999999999999 778876

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.7e-11  Score=54.53  Aligned_cols=40  Identities=10%  Similarity=0.363  Sum_probs=36.4

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      ...|.+++||.|..|++.|...+.|..|+++|.+ .++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV-KSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC-CSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            3568889999999999999999999999999999 778876

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=54.72  Aligned_cols=41  Identities=15%  Similarity=0.340  Sum_probs=36.8

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            34578899999999999999999999999999999 778876

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=55.94  Aligned_cols=41  Identities=17%  Similarity=0.245  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTG-EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSS-CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCC-CCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.1e-12  Score=57.18  Aligned_cols=41  Identities=17%  Similarity=0.176  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            2 SSGSSGTG-EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCCSS-CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCCcCCCC-CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCC
Confidence            36778888 889999999999999999999999999998874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=55.67  Aligned_cols=41  Identities=17%  Similarity=0.164  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTG-EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCS-CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCC-CCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=54.53  Aligned_cols=40  Identities=18%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            2 SSGSSGG-EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCS-CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CccccCC-CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            6778888 889999999999999999999999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-11  Score=55.55  Aligned_cols=40  Identities=20%  Similarity=0.284  Sum_probs=36.6

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            3 SGSSGTG-EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCC-SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5677888 789999999999999999999999999998874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-11  Score=55.51  Aligned_cols=41  Identities=20%  Similarity=0.284  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSG-ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSC-CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCC-CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788898 889999999999999999999999999998874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=55.60  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTG-EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCC-CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=6.4e-12  Score=57.13  Aligned_cols=39  Identities=13%  Similarity=0.067  Sum_probs=20.3

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcC-CCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK-EFKI  100 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~-e~~~  100 (101)
                      |+++|.+ .++|.|..|++.|.+...|..|+++|++ ++||
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoy_A            3 SGSSGQK-EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSG   42 (46)
T ss_dssp             CCCCCCC-SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTS
T ss_pred             CccccCC-CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCC
Confidence            3444444 4455555555555555555555555555 5444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.4e-11  Score=55.37  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTG-ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSS-CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCC-CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            36788999 789999999999999999999999999998874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=54.87  Aligned_cols=42  Identities=26%  Similarity=0.420  Sum_probs=37.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .+||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG-ESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT-SSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC-CCCCCCC
Confidence            35578899999999999999999999999999999 7788774

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=2.8e-11  Score=54.27  Aligned_cols=39  Identities=15%  Similarity=0.198  Sum_probs=27.5

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      .|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHS-DKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC-TTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCC-CCCccCC
Confidence            45666777777777777777777777777777 6666664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2e-11  Score=54.85  Aligned_cols=41  Identities=17%  Similarity=0.189  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTG-MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSS-SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCC-CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.7e-11  Score=54.50  Aligned_cols=40  Identities=15%  Similarity=0.208  Sum_probs=36.6

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 h~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAA-KTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSS-SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            5677888 789999999999999999999999999998874

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.6e-12  Score=57.96  Aligned_cols=41  Identities=17%  Similarity=0.226  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytg_A            2 SSGSSGTG-EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSS-CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSC
T ss_pred             CCCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=56.50  Aligned_cols=41  Identities=17%  Similarity=0.249  Sum_probs=37.3

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHH-HhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR-LKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|++ +|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            2 SSGSSGTG-KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCC-CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             ccccccCC-CCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            46788998 889999999999999999999999 999998874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.8e-11  Score=54.50  Aligned_cols=41  Identities=20%  Similarity=0.464  Sum_probs=36.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            34578889999999999999999999999999999 778865

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3e-11  Score=54.91  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=29.1

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+ .+||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS-CCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC-CCCCCCC
Confidence            356667777777777777777777777777777 6667664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.1e-11  Score=54.81  Aligned_cols=41  Identities=7%  Similarity=0.091  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHT-RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCC-CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            46788888 789999999999999999999999999998874

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=55.12  Aligned_cols=40  Identities=28%  Similarity=0.453  Sum_probs=29.0

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+ .++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-EKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS-CCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCC-CCCCCCC
Confidence            356667777777777777777777777777777 6667664

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.6e-11  Score=55.08  Aligned_cols=39  Identities=18%  Similarity=0.235  Sum_probs=35.5

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            4 GSSGHG-ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCC-CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCC-CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            467888 788999999999999999999999999998874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.15  E-value=4.2e-13  Score=69.16  Aligned_cols=66  Identities=9%  Similarity=0.091  Sum_probs=57.5

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ..+..+...|.+++||.|..|++.|.....|..|++.|.+  .++.|..|++.|.....|..|++.++
T Consensus        17 ~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           17 DHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            4445566778889999999999999999999999998875  36899999999999999999988654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.3e-11  Score=54.67  Aligned_cols=42  Identities=12%  Similarity=0.345  Sum_probs=37.4

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+ .++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR-KSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC-CCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC-CCCCCCC
Confidence            34578899999999999999999999999999999 7788773

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=55.10  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTG-EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCC-CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46788888 889999999999999999999999999998874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=55.04  Aligned_cols=41  Identities=12%  Similarity=0.159  Sum_probs=37.5

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTG-EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCC-CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCC-CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46788998 889999999999999999999999999998874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=3.2e-11  Score=53.41  Aligned_cols=38  Identities=21%  Similarity=0.365  Sum_probs=20.5

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      .|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            34455555555555555555555555555555 444443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.13  E-value=2.3e-11  Score=58.57  Aligned_cols=33  Identities=18%  Similarity=0.305  Sum_probs=31.0

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ++||.|..|++.|.....|..|+++|+|++||+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~   34 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRS   34 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeE
Confidence            679999999999999999999999999999873

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.13  E-value=6e-11  Score=51.96  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=20.8

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .++|.|..|++.|.....|..|+++|++++||
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            44566666666666666666666666666665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.6e-11  Score=54.97  Aligned_cols=43  Identities=19%  Similarity=0.173  Sum_probs=35.3

Q ss_pred             ecccCCCcccccC--cchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         34 VDKEGKKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        34 ~~~~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      ...|.+++||.|.  .|++.|.....|..|+++|.+ .+||.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-VKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC-CCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3467778889997  799999988889889888888 778888766

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.5e-11  Score=52.03  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=24.1

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      +|.+ .++|.|..|++.|....+|..|+++|++++|
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSS-GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCC-CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCC-CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4555 5567777777777777777777777777654

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2e-11  Score=55.20  Aligned_cols=39  Identities=18%  Similarity=0.285  Sum_probs=35.4

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .++|.+ .++|.|..|++.|.....|..|+++|+++++|+
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            4 GSSGTG-QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCS-CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCC-CcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            456788 789999999999999999999999999998874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3e-11  Score=54.31  Aligned_cols=41  Identities=10%  Similarity=0.099  Sum_probs=37.4

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|+++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTD-SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCC-CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCC-CCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46778888 789999999999999999999999999998874

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=6.1e-11  Score=53.11  Aligned_cols=38  Identities=13%  Similarity=0.246  Sum_probs=34.3

Q ss_pred             hhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         63 RVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        63 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +.|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSG-NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSS-SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCC-CCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            35777 778999999999999999999999999998874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.8e-11  Score=53.60  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=34.6

Q ss_pred             hhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         63 RVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        63 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSG-QRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCC-CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCC-CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            45777 789999999999999999999999999999884

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.6e-11  Score=60.40  Aligned_cols=65  Identities=18%  Similarity=0.264  Sum_probs=56.2

Q ss_pred             ccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         30 VPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        30 ~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +..+...+.+.+|+.|..|++.|. ...|..|+ .+.+ .+|+.|..|++.|. ...|..|+++++++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~-~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCG-ARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHH-HCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcC-CCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            345566778889999999999995 88999999 8888 88999999999887 589999999999873

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8e-11  Score=52.92  Aligned_cols=41  Identities=20%  Similarity=0.385  Sum_probs=36.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      +...|.+++||.|..|++.|...+.|..|+++|.+ .+||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG-VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS-CSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC-CCCCCC
Confidence            45678899999999999999999999999999999 777754

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=54.53  Aligned_cols=39  Identities=18%  Similarity=0.228  Sum_probs=35.6

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         4 ~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep0_A            4 GSSGTG-EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSTT-CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCS
T ss_pred             CCCCCC-CCCeeCcccCcccCChHHHHHHHHHhCCCCCCC
Confidence            567888 789999999999999999999999999998874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-10  Score=48.84  Aligned_cols=30  Identities=13%  Similarity=0.193  Sum_probs=23.5

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ||.|..|++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            577777888888888888888888877776

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.9e-11  Score=54.48  Aligned_cols=39  Identities=15%  Similarity=0.121  Sum_probs=35.4

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +++|.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         4 ~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            4 GSSGEG-EKPYQCSECGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             SSSCSC-CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            467888 788999999999999999999999999998874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.06  E-value=8.6e-11  Score=50.75  Aligned_cols=36  Identities=14%  Similarity=0.145  Sum_probs=22.9

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      |+++|.+ .+||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCC-CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            4455666 55666666666666666666666666653

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=52.90  Aligned_cols=43  Identities=19%  Similarity=0.291  Sum_probs=36.7

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+..+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4567889999999999999999999999999998723468775

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.04  E-value=1.7e-10  Score=49.07  Aligned_cols=34  Identities=21%  Similarity=0.401  Sum_probs=23.4

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      |.+ .++|.|..|++.|.+...|..|+++|++++|
T Consensus         2 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSG-SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCC-CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCC-CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            344 5567777777777777777777777777654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=2.2e-10  Score=56.28  Aligned_cols=40  Identities=15%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             ccCCCcccccCc--chhhccChHHHHHHh-hhhhCCCCceeccc
Q psy10080         36 KEGKKTTWACPM--CRKIYAFKYNLMRHL-RVECGKEPSQMCLF   76 (101)
Q Consensus        36 ~~~~~~p~~C~~--c~~~~~~~~~l~~h~-~~h~~~~~~~~c~~   76 (101)
                      ...+++||.|..  |++.|...+.|..|+ ++|++ .+|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCccccc
Confidence            356778999965  999999999999996 68888 77777754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.01  E-value=2.3e-10  Score=48.73  Aligned_cols=31  Identities=13%  Similarity=0.399  Sum_probs=18.8

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEFK   99 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~   99 (101)
                      .++|.|..|++.|.....|..|+++|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4456666666666666666666666665543

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.00  E-value=4e-10  Score=52.81  Aligned_cols=45  Identities=18%  Similarity=0.239  Sum_probs=38.7

Q ss_pred             cccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCce
Q psy10080         27 KMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQ   72 (101)
Q Consensus        27 ~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~   72 (101)
                      ...+..+...|.+++||.|..|++.|...+.|..|+++|.+ .+||
T Consensus         9 ~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   53 (54)
T 1yui_A            9 PPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF-AKPG   53 (54)
T ss_dssp             SSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT-TSCC
T ss_pred             CcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc-CCCC
Confidence            34455667788999999999999999999999999999999 6665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=3.8e-10  Score=50.85  Aligned_cols=37  Identities=22%  Similarity=0.362  Sum_probs=33.6

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +|.+ .++|.|..|++.|.....|..|+++|+++++|.
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~   40 (45)
T 2epq_A            4 GSSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKS   40 (45)
T ss_dssp             CCSS-CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCC
T ss_pred             CcCC-CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCC
Confidence            4677 778999999999999999999999999998874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=4.7e-10  Score=48.66  Aligned_cols=35  Identities=11%  Similarity=0.297  Sum_probs=25.9

Q ss_pred             hCCCCceecc--ccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         66 CGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        66 ~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ++ .++|.|.  .|++.|.....|..|+++|+++++|.
T Consensus         2 ~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            2 SD-DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             TT-CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CC-CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            44 5677787  48888888888888888888777763

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.97  E-value=2.9e-10  Score=49.68  Aligned_cols=37  Identities=14%  Similarity=0.384  Sum_probs=32.5

Q ss_pred             cCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080         37 EGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus        37 ~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      |.+++||.|..|++.|...+.|..|+++|.+ .++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR-DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC-SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC-Ccccee
Confidence            4567899999999999999999999999999 777754

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=52.08  Aligned_cols=40  Identities=15%  Similarity=0.217  Sum_probs=35.7

Q ss_pred             HhhhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         61 HLRVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        61 h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      |.++|.+ .++|.|.  .|++.|.....|..|+++|++++||+
T Consensus         3 ~~~~H~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            3 SGSSGTG-EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CCCSSCC-CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCCCcCC-CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            4567888 7899998  89999999999999999999998874

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=2.3e-11  Score=62.94  Aligned_cols=59  Identities=12%  Similarity=0.206  Sum_probs=49.2

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ..+|.+++||.|..|++.|.....|..|+++|.+ .+||.|..|.    ....|..|+++|.|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE-EFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHH-HHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC-CCCcccchhh----hHHHHHhhhcccccc
Confidence            5578899999999999999999999999999999 7889987654    445566677777774

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=4.1e-10  Score=56.40  Aligned_cols=61  Identities=15%  Similarity=0.267  Sum_probs=46.7

Q ss_pred             ccccccCCCCCCCCCCCccccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCceec
Q psy10080          9 DVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMC   74 (101)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c   74 (101)
                      ..+.+..++...    .....+..+...|.+++||.|..|++.|.....|..|+++|.+ .+||.|
T Consensus        17 ~~~~C~~C~~~f----~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSF----SHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG-SGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBC----SCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC-CCCCCC
T ss_pred             CCEECCCCCccc----CCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            344454444322    2234455667789999999999999999999999999999999 778876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=6.6e-10  Score=54.60  Aligned_cols=35  Identities=9%  Similarity=0.233  Sum_probs=31.3

Q ss_pred             hhCCCCceeccc--cccccCChHHHHHHH-HHhcCCCCC
Q psy10080         65 ECGKEPSQMCLF--CSYKCKHKTDIMHHM-RLKHKEFKI  100 (101)
Q Consensus        65 h~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~e~~~  100 (101)
                      +++ .+||.|..  |+++|....+|..|+ ++|++++||
T Consensus        22 ~sG-EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           22 YSP-YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SCS-SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             ccC-CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            566 78999975  999999999999997 689999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=7.8e-10  Score=47.61  Aligned_cols=33  Identities=15%  Similarity=0.490  Sum_probs=30.8

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ..|.+++||.|..|++.|.....|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            367889999999999999999999999999998

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=1.6e-09  Score=56.77  Aligned_cols=49  Identities=18%  Similarity=0.098  Sum_probs=43.3

Q ss_pred             hccChHHHHHHhhhhhCCCCceecccccccc-CChHHHHHHHHHhcCCCCCC
Q psy10080         51 IYAFKYNLMRHLRVECGKEPSQMCLFCSYKC-KHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        51 ~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f-~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .|...+.+..|++.+.+ .++|.|..|++.| ....+|..|+++| ++++|+
T Consensus        15 ~~~~~~~~~~~~~~~~~-~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~   64 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVD-KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFT   64 (96)
T ss_dssp             SSCTTCHHHHHHHHHHH-TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCC
T ss_pred             CCCCchHHHHHHHHhcC-CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeE
Confidence            45667778889999998 8899999999999 9999999999999 998874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=9.1e-10  Score=48.16  Aligned_cols=29  Identities=17%  Similarity=0.356  Sum_probs=17.5

Q ss_pred             CCceeccc--cccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCLF--CSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ++||.|..  |+++|.....|..|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45566654  666666666666666666654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=5.7e-10  Score=48.08  Aligned_cols=32  Identities=13%  Similarity=0.392  Sum_probs=19.2

Q ss_pred             hhCCCCceeccccccccCCh-HHHHHHHHHhcCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHK-TDIMHHMRLKHKE   97 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~-~~l~~h~~~h~~e   97 (101)
                      |.+ .++|.|..|++.|... ..|..|+++|+++
T Consensus         4 h~~-~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSS-GRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCC-CCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCC-CCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            444 4556666666666666 6666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.1e-09  Score=46.77  Aligned_cols=32  Identities=25%  Similarity=0.414  Sum_probs=19.4

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      |.+ .++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSS-GKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCC-CCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCC-CCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            444 45566666666666666666666666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.91  E-value=1.2e-09  Score=46.36  Aligned_cols=32  Identities=28%  Similarity=0.561  Sum_probs=29.7

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +|.+++||.|..|++.|...+.|..|+++|.+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            36788999999999999999999999999988

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=3e-10  Score=60.23  Aligned_cols=69  Identities=16%  Similarity=0.226  Sum_probs=50.6

Q ss_pred             CCccccccccCCCCCCCCCCCccccccceec-cc---CCCcccccCcchhhccChHHHHHH-hhhhhCCCCceeccccc
Q psy10080          5 KSTDDVFGEQDTGAQNSQDDDEKMLVPYNVD-KE---GKKTTWACPMCRKIYAFKYNLMRH-LRVECGKEPSQMCLFCS   78 (101)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~p~~C~~c~~~~~~~~~l~~h-~~~h~~~~~~~~c~~c~   78 (101)
                      +.+...+.+..|+.....    ...+..+.. .|   .+++||.|..|++.|...+.|..| +++|.+ .+||.|..+.
T Consensus        13 ~~gekpy~C~~Cgk~F~~----~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htg-ekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPD----LNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG-EENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESC----HHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTT-CCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCC----HHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCC-CCCeeCCccc
Confidence            344555666665543322    333444544 57   568899999999999999999999 899999 8899998754

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=9.9e-10  Score=47.02  Aligned_cols=32  Identities=22%  Similarity=0.492  Sum_probs=19.5

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      |.+ .++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSS-GKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCC-CCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCC-CCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            444 45566666666666666666666666654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.90  E-value=1.2e-09  Score=46.28  Aligned_cols=32  Identities=22%  Similarity=0.494  Sum_probs=29.5

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +|.+++||.|..|++.|...+.|..|++.|.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            36778899999999999999999999999988

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.4e-09  Score=46.43  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=18.2

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .++|.|..|++.|.+...|..|+++|+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44566666666666666666666666655

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=7.3e-10  Score=47.45  Aligned_cols=29  Identities=24%  Similarity=0.323  Sum_probs=16.7

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .++|.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            44555555666666556666665555554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=2.1e-09  Score=45.93  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=20.3

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .++|.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            55677777777777777777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=8.4e-10  Score=47.67  Aligned_cols=32  Identities=16%  Similarity=0.294  Sum_probs=17.8

Q ss_pred             hhhCCCCceeccccccccCChHHHHHH-HHHhcC
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHH-MRLKHK   96 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~   96 (101)
                      +|.+ .+||.|..|++.|.....|..| +++|++
T Consensus         3 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSS-GHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSS-SCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCC-CcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            3444 4455555555555555555555 555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=9.5e-10  Score=50.23  Aligned_cols=36  Identities=11%  Similarity=0.097  Sum_probs=32.5

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      +.+ .++|.|..|++.|.....|..|+++|++++||+
T Consensus         7 ~~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (48)
T 2epr_A            7 GRT-RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   42 (48)
T ss_dssp             CCC-CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             CCC-CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCcc
Confidence            455 678999999999999999999999999998874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.85  E-value=2.6e-09  Score=45.88  Aligned_cols=35  Identities=14%  Similarity=0.281  Sum_probs=31.6

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +...|.+++||.|..|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            34578899999999999999999999999999876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.84  E-value=2.5e-09  Score=45.01  Aligned_cols=32  Identities=22%  Similarity=0.386  Sum_probs=29.0

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCcee
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQM   73 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~   73 (101)
                      +||.|..|++.|...+.|..|+++|.+ .++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL-LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT-TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC-CCCCC
Confidence            589999999999999999999999999 66663

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=53.94  Aligned_cols=61  Identities=18%  Similarity=0.258  Sum_probs=45.6

Q ss_pred             ccccccccCCCCCCCCCCCccccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCce
Q psy10080          7 TDDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQ   72 (101)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~   72 (101)
                      +...+.+..|+...    .....+..+...|.+++||.|..|++.|.....|..|+++|.+ .+||
T Consensus        14 ~~~~~~C~~C~k~f----~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASF----RYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG-EKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCB----SCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC-SCCC
T ss_pred             CCCCeECCCCCcee----CCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC-CCCC
Confidence            34445555544433    2234455667789999999999999999999999999999999 6554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.6e-09  Score=46.66  Aligned_cols=32  Identities=28%  Similarity=0.481  Sum_probs=29.2

Q ss_pred             ccCCCcccccCc--chhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPM--CRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .+.+++||.|..  |++.|...+.|..|+++|++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            456789999986  99999999999999999987

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.81  E-value=2.6e-09  Score=48.87  Aligned_cols=31  Identities=26%  Similarity=0.507  Sum_probs=21.1

Q ss_pred             cCCCcccccCcchhhccChHHHHHHhh-hhhC
Q psy10080         37 EGKKTTWACPMCRKIYAFKYNLMRHLR-VECG   67 (101)
Q Consensus        37 ~~~~~p~~C~~c~~~~~~~~~l~~h~~-~h~~   67 (101)
                      |.+++||.|..|++.|.....|..|++ +|.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            556667777777777777777777766 6666

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.81  E-value=1.4e-09  Score=59.38  Aligned_cols=57  Identities=14%  Similarity=0.235  Sum_probs=46.2

Q ss_pred             CcccccCcchhhcc------ChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         40 KTTWACPMCRKIYA------FKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        40 ~~p~~C~~c~~~~~------~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ++++.|..|.+.|.      ....|..|+ .|.+ .+||.|..|++.|.....|..|+++|  ++||
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~  101 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA-ISQFVCPLCLMPFSSSVSLKQHIRYT--EHTK  101 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH-HCSEECTTTCCEESSHHHHHHHHHHT--CCCC
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCC-CCCeECCCCCcccCCHhHHHHHHHHC--CCCC
Confidence            45788888887766      456666666 5888 78999999999999999999999998  5554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.79  E-value=9.5e-11  Score=49.19  Aligned_cols=30  Identities=10%  Similarity=0.283  Sum_probs=17.5

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ||.|..|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555666665555566666556555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=5.6e-09  Score=44.49  Aligned_cols=32  Identities=34%  Similarity=0.570  Sum_probs=29.9

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +|.+++||.|..|++.|.....|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            57788999999999999999999999999987

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.77  E-value=9e-09  Score=41.53  Aligned_cols=27  Identities=22%  Similarity=0.459  Sum_probs=19.6

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566777777777777777777777765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=5.7e-09  Score=45.08  Aligned_cols=35  Identities=11%  Similarity=0.145  Sum_probs=30.9

Q ss_pred             cCCCcccccC--cchhhccChHHHHHHhhhhhCCCCce
Q psy10080         37 EGKKTTWACP--MCRKIYAFKYNLMRHLRVECGKEPSQ   72 (101)
Q Consensus        37 ~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~~~~~~   72 (101)
                      |.+++||.|.  .|++.|...+.|..|+++|.+ .++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM-TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT-TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC-CCCC
Confidence            4578899999  599999999999999999999 6654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.1e-10  Score=59.05  Aligned_cols=48  Identities=13%  Similarity=0.111  Sum_probs=40.6

Q ss_pred             ccChHHHHHHhhhhhCCCCceeccccccccC-ChHHHHHHHHHhcC-CCCC
Q psy10080         52 YAFKYNLMRHLRVECGKEPSQMCLFCSYKCK-HKTDIMHHMRLKHK-EFKI  100 (101)
Q Consensus        52 ~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~-~~~~l~~h~~~h~~-e~~~  100 (101)
                      +.....+..|+++|.+ .++|.|..|++.|. ....|..|+++|++ +++|
T Consensus         6 ~~~~~~~~~h~~~h~~-~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~   55 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHE-RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDAL   55 (98)
T ss_dssp             CCCCCSCSHHHHTTTT-TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhcc-CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCE
Confidence            3444556788999999 88999999999999 99999999999998 6544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=5.7e-09  Score=44.53  Aligned_cols=32  Identities=19%  Similarity=0.356  Sum_probs=29.8

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .|.+++||.|..|++.|...+.|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            57788999999999999999999999999887

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=5.9e-09  Score=44.48  Aligned_cols=32  Identities=16%  Similarity=0.400  Sum_probs=29.6

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .|.+++||.|..|++.|...+.|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            56778899999999999999999999999987

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=7.2e-09  Score=44.48  Aligned_cols=32  Identities=22%  Similarity=0.470  Sum_probs=29.9

Q ss_pred             ccCCCcccccCcchhhccCh-HHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFK-YNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~-~~l~~h~~~h~~   67 (101)
                      +|.+++||.|..|++.|... +.|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            57788999999999999999 999999999987

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=8.9e-09  Score=41.81  Aligned_cols=28  Identities=18%  Similarity=0.435  Sum_probs=20.1

Q ss_pred             CceeccccccccCChHHHHHHHHHhcCC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3567777777777777777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.5e-09  Score=45.29  Aligned_cols=33  Identities=18%  Similarity=0.310  Sum_probs=30.1

Q ss_pred             cccCCCcccccCcchhhccChHHHHHH-hhhhhC
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRH-LRVECG   67 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h-~~~h~~   67 (101)
                      ..|.+++||.|..|++.|...+.|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            367889999999999999999999999 888876

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.75  E-value=7.4e-09  Score=44.56  Aligned_cols=29  Identities=17%  Similarity=0.391  Sum_probs=17.6

Q ss_pred             CCceecc--ccccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCL--FCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .++|.|.  .|++.|.....|..|+++|+++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4456665  3666666666666666666654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=9.3e-09  Score=43.76  Aligned_cols=32  Identities=25%  Similarity=0.354  Sum_probs=29.7

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .|.+++||.|..|++.|.....|..|+++|.+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            56778999999999999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=9.1e-09  Score=41.48  Aligned_cols=28  Identities=18%  Similarity=0.384  Sum_probs=19.4

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      ||.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5667777777777777777777776653

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=9.7e-09  Score=47.97  Aligned_cols=36  Identities=11%  Similarity=0.212  Sum_probs=32.2

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHH-HhcCCCCCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMR-LKHKEFKIE  101 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e~~~~  101 (101)
                      |.+ .++|.|..|++.|.....|..|++ +|++++||+
T Consensus         7 ~~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~   43 (54)
T 2eps_A            7 GSV-GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   43 (54)
T ss_dssp             CCS-SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCC-CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCcc
Confidence            556 778999999999999999999997 899998874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.73  E-value=6.9e-09  Score=41.94  Aligned_cols=27  Identities=15%  Similarity=0.336  Sum_probs=16.9

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            456666666666666666666666654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.73  E-value=4.9e-09  Score=51.72  Aligned_cols=38  Identities=18%  Similarity=0.327  Sum_probs=34.6

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .++|.+ .++|.|..|++.|.....|..|+++|+++++|
T Consensus         6 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~   43 (72)
T 1x6e_A            6 SGIHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGEKPY   43 (72)
T ss_dssp             CCTTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCSCCE
T ss_pred             CcccCC-CCCccCCCCCCccCCHHHHHHHHHhcCCCCCe
Confidence            467888 78999999999999999999999999999876

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.72  E-value=1.2e-08  Score=41.35  Aligned_cols=28  Identities=18%  Similarity=0.653  Sum_probs=19.6

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4667777777777777777777777664

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.72  E-value=1.2e-09  Score=49.76  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=23.6

Q ss_pred             hhhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCC
Q psy10080         62 LRVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        62 ~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      ...|.+ .+||.|.  .|++.|.....|..|+++|++++
T Consensus        10 ~~~H~~-~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           10 YVKEMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SCEEET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HhccCC-CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344666 5667774  57777777777777777776653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.71  E-value=5.4e-09  Score=47.77  Aligned_cols=34  Identities=18%  Similarity=0.240  Sum_probs=29.0

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHH-HhcCCC
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMR-LKHKEF   98 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e~   98 (101)
                      +|.+ .++|.|..|++.|....+|..|++ +|+++.
T Consensus         1 ~Ht~-~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDR-DKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTT-TSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCC-CcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            3667 779999999999999999999999 999873

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.71  E-value=4.9e-09  Score=53.76  Aligned_cols=38  Identities=18%  Similarity=0.338  Sum_probs=33.0

Q ss_pred             hhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         63 RVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        63 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .++.+ .+++.|+.|++.|.+...|..|+++|++++||+
T Consensus        21 ~~~~~-~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~   58 (85)
T 2lv2_A           21 GLSAS-AECHLCPVCGESFASKGAQERHLRLLHAAQVFP   58 (85)
T ss_dssp             SSCCC-CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEE
T ss_pred             CCCCC-CCCEECCCCCCCcCcHHHHhhhhhhccCCCccC
Confidence            34455 667999999999999999999999999998873

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.70  E-value=1e-08  Score=41.28  Aligned_cols=27  Identities=15%  Similarity=0.475  Sum_probs=17.6

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            456666666666666666666666654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.3e-08  Score=43.32  Aligned_cols=32  Identities=28%  Similarity=0.681  Sum_probs=29.3

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .+.+++||.|..|++.|.....|..|+++|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            45678899999999999999999999999987

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.69  E-value=1.3e-08  Score=41.94  Aligned_cols=27  Identities=22%  Similarity=0.566  Sum_probs=18.5

Q ss_pred             ceecc--ccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCL--FCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~--~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56665  6777777777777777777665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.68  E-value=7.6e-09  Score=52.46  Aligned_cols=40  Identities=15%  Similarity=0.263  Sum_probs=37.0

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceecccccccc
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKC   81 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f   81 (101)
                      ++|.|..|++.|.....|..|++.|.+ ..++.|..|+..+
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~~~~~~~~~   85 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADNCAG-PDGVEGENSGPSS   85 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC-CCSCCCCCCCCCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHHccC-CCCcccCCCCCCC
Confidence            799999999999999999999999999 7789999998765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.66  E-value=1.9e-08  Score=41.66  Aligned_cols=27  Identities=15%  Similarity=0.343  Sum_probs=17.2

Q ss_pred             ceecc--ccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCL--FCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~--~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|.  .|++.|.....|..|+++|+++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            45666  5666666666666666666654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.66  E-value=7.8e-09  Score=44.59  Aligned_cols=26  Identities=19%  Similarity=0.262  Sum_probs=17.5

Q ss_pred             cCCCcccccCcchhhccChHHHHHHh
Q psy10080         37 EGKKTTWACPMCRKIYAFKYNLMRHL   62 (101)
Q Consensus        37 ~~~~~p~~C~~c~~~~~~~~~l~~h~   62 (101)
                      ..+++||.|+.|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            34566777777777777777776665

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.9e-08  Score=49.11  Aligned_cols=33  Identities=15%  Similarity=0.235  Sum_probs=29.1

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhCC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECGK   68 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~   68 (101)
                      .+.+++||.|..|++.|...+.|..|+++|+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            466788999999999999999999999999983

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.65  E-value=1.2e-08  Score=52.68  Aligned_cols=47  Identities=28%  Similarity=0.327  Sum_probs=39.5

Q ss_pred             ccccceecc-cCCCcc--------cccCcchhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         28 MLVPYNVDK-EGKKTT--------WACPMCRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        28 ~~~~~~~~~-~~~~~p--------~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      ..+..+... |.++++        |.|..|++.|.....|..|+++|++ .+||.|.
T Consensus        39 ~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   94 (95)
T 2ej4_A           39 HELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKSGPSS   94 (95)
T ss_dssp             HHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT-CCCCSSC
T ss_pred             HHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            444455555 888777        9999999999999999999999999 7889885

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.65  E-value=3.5e-09  Score=52.93  Aligned_cols=42  Identities=17%  Similarity=0.265  Sum_probs=35.9

Q ss_pred             HHHHhhhhhCCCCceeccccccccCChHHHHHHHH-HhcCC-CCC
Q psy10080         58 LMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMR-LKHKE-FKI  100 (101)
Q Consensus        58 l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e-~~~  100 (101)
                      +..|+++|.+ .++|.|..|++.|.....|..|++ .|+++ ++|
T Consensus         3 ~~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~   46 (77)
T 2ct1_A            3 SGSSGRTHSG-EKPYECYICHARFTQSGTMKMHILQKHTENVAKF   46 (77)
T ss_dssp             CCCCCCCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSE
T ss_pred             CCccccccCC-CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCcc
Confidence            4468899999 889999999999999999999997 67764 554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=3.9e-08  Score=48.01  Aligned_cols=33  Identities=9%  Similarity=0.025  Sum_probs=29.8

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +.+ .+||.|..|++.|.+...|..|+++|+++.
T Consensus         8 ~~~-ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LRE-AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCC-CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCC-ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            455 789999999999999999999999999873

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.64  E-value=1.4e-08  Score=40.36  Aligned_cols=25  Identities=20%  Similarity=0.452  Sum_probs=15.9

Q ss_pred             eeccccccccCChHHHHHHHHHhcC
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      |.|..|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5566666666666666666666655

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.07  E-value=3.5e-09  Score=42.95  Aligned_cols=27  Identities=19%  Similarity=0.512  Sum_probs=16.9

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|..|++.|....+|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            456666666666666666666666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.7e-09  Score=55.80  Aligned_cols=38  Identities=16%  Similarity=0.395  Sum_probs=34.0

Q ss_pred             hhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         62 LRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        62 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .++|.+ .++|.|..|++.|.....|..|+++|++++||
T Consensus        17 ~~~H~~-~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~   54 (88)
T 1x6f_A           17 NGPRLQ-NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQK   54 (88)
T ss_dssp             CCSCCC-CSCEECSSSCCEESSHHHHHHHHHHHHHHHHH
T ss_pred             ccccCC-CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCc
Confidence            456888 78999999999999999999999999988665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.62  E-value=1.7e-08  Score=49.46  Aligned_cols=60  Identities=15%  Similarity=0.136  Sum_probs=45.3

Q ss_pred             ccccccccCCCCCCCCCCCccccccceecccCCCcccccCcchhhccChHHHHHHhhhhhCCCCc
Q psy10080          7 TDDVFGEQDTGAQNSQDDDEKMLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGKEPS   71 (101)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~   71 (101)
                      ....+.+..++....    ....+..+...|.+++||.|..|++.|.....|..|++.|.+ .+|
T Consensus         6 ~~~~~~C~~C~k~f~----~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~p   65 (70)
T 1x5w_A            6 SGHPEKCSECSYSCS----SKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG-DMS   65 (70)
T ss_dssp             CCCSEECSSSSCEES----SHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS-SSC
T ss_pred             CCCCeECCCCCcccC----CHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC-CCC
Confidence            445556665554332    234455666789999999999999999999999999999998 554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=2.5e-08  Score=39.95  Aligned_cols=25  Identities=20%  Similarity=0.445  Sum_probs=15.3

Q ss_pred             ceeccccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      +|.|..|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            4566666666666666666666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=4e-08  Score=39.02  Aligned_cols=25  Identities=16%  Similarity=0.477  Sum_probs=16.2

Q ss_pred             ceeccccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ||.|..|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHcc
Confidence            5666666666666666666666653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.59  E-value=2.1e-08  Score=47.04  Aligned_cols=32  Identities=19%  Similarity=0.313  Sum_probs=27.7

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .++|.|..|++.|.....|..|+++|++++||
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   33 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPY   33 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCE
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCc
Confidence            46899999999999999999999999999876

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.59  E-value=4.1e-08  Score=42.13  Aligned_cols=31  Identities=39%  Similarity=0.639  Sum_probs=28.5

Q ss_pred             cCCCcccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         37 EGKKTTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        37 ~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +.+++||.|.  .|++.|...+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            5678899998  599999999999999999987

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.59  E-value=2.2e-09  Score=44.83  Aligned_cols=31  Identities=23%  Similarity=0.431  Sum_probs=28.0

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCce
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQ   72 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~   72 (101)
                      +||.|..|++.|...+.|..|+++|++ .+||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFI-VVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSS-SSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHcc-CCCC
Confidence            489999999999999999999999998 6664

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=6.1e-09  Score=42.40  Aligned_cols=27  Identities=19%  Similarity=0.536  Sum_probs=16.9

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|..|++.|....+|..|+++|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            456666666666666666666666554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3e-09  Score=52.34  Aligned_cols=37  Identities=22%  Similarity=0.160  Sum_probs=34.4

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceecccc
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFC   77 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c   77 (101)
                      +++|.|..|++.|.....|..|+++|.+ .++|.|..|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~-~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESG-KKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCC-CCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcC-CCCCCCCCC
Confidence            6799999999999999999999999999 788999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.55  E-value=2.2e-09  Score=51.74  Aligned_cols=38  Identities=13%  Similarity=0.041  Sum_probs=33.1

Q ss_pred             HHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         59 MRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        59 ~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ..|+++|.+ .+||.|+.|++.|.....|.   ++|++++||
T Consensus         3 ~~h~~~H~~-~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~   40 (62)
T 1vd4_A            3 ETDERDSTN-RASFKCPVCSSTFTDLEANQ---LFDPMTGTF   40 (62)
T ss_dssp             CCCSSSCCS-SSEEECSSSCCEEEHHHHHH---HEETTTTEE
T ss_pred             hhHHHHcCC-CCCccCCCCCchhccHHHhH---hhcCCCCCE
Confidence            457888999 88999999999999988886   789999776

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.55  E-value=3e-08  Score=39.70  Aligned_cols=28  Identities=29%  Similarity=0.710  Sum_probs=25.0

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ++||.|..|++.|...+.|..|+++|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3689999999999999999999988753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.54  E-value=2.9e-08  Score=40.32  Aligned_cols=27  Identities=11%  Similarity=0.411  Sum_probs=16.0

Q ss_pred             ceeccccccccCChHHHHHH-HHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHH-MRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h-~~~h~~e   97 (101)
                      ||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45566666666666666666 4555554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=3.4e-08  Score=39.33  Aligned_cols=24  Identities=25%  Similarity=0.526  Sum_probs=14.1

Q ss_pred             ceeccccccccCChHHHHHHHHHh
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      ||.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            455666666666666666665554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=3.8e-08  Score=39.11  Aligned_cols=27  Identities=19%  Similarity=0.445  Sum_probs=24.3

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhh
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            369999999999999999999998763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.53  E-value=5.2e-08  Score=39.19  Aligned_cols=27  Identities=26%  Similarity=0.492  Sum_probs=25.5

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            489999999999999999999999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.53  E-value=2.3e-08  Score=48.30  Aligned_cols=37  Identities=19%  Similarity=0.242  Sum_probs=32.1

Q ss_pred             hhhhCCCCceeccccccccCChHHHHHHHHH-h-cCCCCC
Q psy10080         63 RVECGKEPSQMCLFCSYKCKHKTDIMHHMRL-K-HKEFKI  100 (101)
Q Consensus        63 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~-h-~~e~~~  100 (101)
                      ++|.+ .++|.|..|++.|.....|..|++. | +++++|
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~   41 (66)
T 2drp_A            3 FTKEG-EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVY   41 (66)
T ss_dssp             CEEEE-TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCE
T ss_pred             cccCC-CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCe
Confidence            46777 7899999999999999999999998 6 477765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.52  E-value=4.9e-08  Score=39.45  Aligned_cols=28  Identities=21%  Similarity=0.456  Sum_probs=25.9

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ++||.|..|++.|.....|..|+++|.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3699999999999999999999999887

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.51  E-value=7.8e-08  Score=38.59  Aligned_cols=27  Identities=26%  Similarity=0.647  Sum_probs=25.3

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            489999999999999999999999987

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=3.3e-08  Score=39.38  Aligned_cols=27  Identities=22%  Similarity=0.525  Sum_probs=24.1

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhh
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            369999999999999999999988763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=9.1e-08  Score=38.34  Aligned_cols=27  Identities=37%  Similarity=0.666  Sum_probs=25.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|.....|..|+++|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            489999999999999999999999987

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=1e-07  Score=38.41  Aligned_cols=27  Identities=26%  Similarity=0.445  Sum_probs=25.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            489999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.48  E-value=3.2e-08  Score=46.38  Aligned_cols=40  Identities=15%  Similarity=0.388  Sum_probs=35.2

Q ss_pred             ccccceecccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         28 MLVPYNVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        28 ~~~~~~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ..+..+...|.+++||.|..|++.|.....|..|+++|.+
T Consensus        15 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A           15 SMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             HHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             HHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            4455666789999999999999999999999999999887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=3.8e-08  Score=49.11  Aligned_cols=35  Identities=20%  Similarity=0.628  Sum_probs=31.0

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcC---CCCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHK---EFKI  100 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~---e~~~  100 (101)
                      |++ .++|.|..|++.|.....|..|+++|++   +++|
T Consensus         2 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~   39 (78)
T 2d9h_A            2 SSG-SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRF   39 (78)
T ss_dssp             CCS-CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCE
T ss_pred             CCC-CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCccc
Confidence            567 7899999999999999999999999986   6655

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.48  E-value=8.5e-08  Score=38.39  Aligned_cols=27  Identities=30%  Similarity=0.578  Sum_probs=25.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            489999999999999999999999987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=7.8e-08  Score=45.53  Aligned_cols=31  Identities=19%  Similarity=0.341  Sum_probs=28.6

Q ss_pred             CceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      +||.|..|++.|.....|..|+++|+++++|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   31 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPY   31 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSE
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCc
Confidence            3789999999999999999999999999776

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.47  E-value=1.2e-07  Score=39.05  Aligned_cols=28  Identities=21%  Similarity=0.516  Sum_probs=25.9

Q ss_pred             CcccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ++||.|.  .|++.|...+.|..|+++|.+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            3689999  899999999999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.46  E-value=1.7e-07  Score=40.33  Aligned_cols=30  Identities=17%  Similarity=0.217  Sum_probs=25.5

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      +.+ ++||.|..|+++|.+.++|..|+..+-
T Consensus         3 ~~g-ekp~~C~~CgK~F~~~s~L~~H~py~C   32 (36)
T 1fv5_A            3 LLK-PARFMCLPCGIAFSSPSTLEAHQAYYC   32 (36)
T ss_dssp             SSS-CCCCEETTTTEECSCHHHHHHHHHHTS
T ss_pred             CCC-ccCeECCCCCCccCCHhHccCcCCeEC
Confidence            345 779999999999999999999985543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.42  E-value=1.4e-07  Score=38.57  Aligned_cols=27  Identities=30%  Similarity=0.605  Sum_probs=25.1

Q ss_pred             cccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|.  .|++.|...+.|..|+++|.+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            489998  999999999999999999987

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.40  E-value=1.6e-07  Score=37.08  Aligned_cols=26  Identities=31%  Similarity=0.586  Sum_probs=23.5

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ||.|..|++.|...+.|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            68999999999999999999998876

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=3.5e-08  Score=39.82  Aligned_cols=27  Identities=30%  Similarity=0.630  Sum_probs=25.1

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            489999999999999999999999887

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=1.1e-07  Score=43.08  Aligned_cols=33  Identities=27%  Similarity=0.518  Sum_probs=29.9

Q ss_pred             cccCCCcccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         35 DKEGKKTTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        35 ~~~~~~~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ..|.+++||.|.  .|++.|...+.|..|+++|.+
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            358889999996  799999999999999999987

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.9e-08  Score=38.70  Aligned_cols=24  Identities=17%  Similarity=0.483  Sum_probs=12.4

Q ss_pred             ceeccccccccCChHHHHHHHHHh
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      ||.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344555555555555555555444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4.1e-08  Score=38.63  Aligned_cols=26  Identities=23%  Similarity=0.498  Sum_probs=23.5

Q ss_pred             cccccCcchhhccChHHHHHHhhhhh
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      +||.|..|++.|...+.|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            48999999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.37  E-value=2.6e-07  Score=36.98  Aligned_cols=25  Identities=12%  Similarity=0.409  Sum_probs=15.1

Q ss_pred             ceecc--ccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCL--FCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~--~c~~~f~~~~~l~~h~~~h~   95 (101)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45566  66666666666666666554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.71  E-value=5e-08  Score=39.52  Aligned_cols=27  Identities=30%  Similarity=0.663  Sum_probs=25.3

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..|++.|...+.|..|+++|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            689999999999999999999999876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=2.2e-07  Score=37.53  Aligned_cols=27  Identities=26%  Similarity=0.759  Sum_probs=24.8

Q ss_pred             cccccCcchhhccChHHHHHH-hhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRH-LRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h-~~~h~~   67 (101)
                      +||.|..|++.|...+.|..| +++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            489999999999999999999 788877

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.30  E-value=3.3e-07  Score=36.62  Aligned_cols=27  Identities=22%  Similarity=0.592  Sum_probs=24.5

Q ss_pred             cccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|.  .|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999998864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.19  E-value=7.1e-07  Score=43.77  Aligned_cols=37  Identities=14%  Similarity=0.266  Sum_probs=32.3

Q ss_pred             hhhhCCCCceecc--ccccccCChHHHHHHHHHhcCCCCC
Q psy10080         63 RVECGKEPSQMCL--FCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        63 ~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .++.+ .++|.|.  .|++.|.....|..|+++|+++++|
T Consensus        12 ~~~~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~   50 (73)
T 1f2i_G           12 YVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPF   50 (73)
T ss_dssp             CCCCC-CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             ccCCC-CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCe
Confidence            34666 7789997  5999999999999999999999776

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.15  E-value=1.6e-06  Score=42.36  Aligned_cols=32  Identities=19%  Similarity=0.310  Sum_probs=29.6

Q ss_pred             CCceeccc--cccccCChHHHHHHHHHhcCCCCC
Q psy10080         69 EPSQMCLF--CSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        69 ~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .++|.|..  |++.|.....|..|+++|+++++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   48 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPF   48 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCc
Confidence            56899988  999999999999999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.1e-06  Score=41.37  Aligned_cols=30  Identities=17%  Similarity=0.347  Sum_probs=27.6

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .+||.|..|++.|. ...|..|+++ ++++||
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~   37 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPV   37 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEE
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCc
Confidence            56899999999999 9999999999 998876

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.81  E-value=6e-05  Score=36.30  Aligned_cols=51  Identities=20%  Similarity=0.451  Sum_probs=41.5

Q ss_pred             cCcchhhccChHHHHHHh-hhhhCCC-----Cceecc--ccccccCChHHHHHHHHHhc
Q psy10080         45 CPMCRKIYAFKYNLMRHL-RVECGKE-----PSQMCL--FCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        45 C~~c~~~~~~~~~l~~h~-~~h~~~~-----~~~~c~--~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ...|++.|.....|..|+ ..|.+..     .+|.|.  .|++.+.....|..|++..+
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            345999999999999997 4687622     268896  79999998999999998753

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=1.7e-06  Score=43.07  Aligned_cols=41  Identities=15%  Similarity=0.155  Sum_probs=34.7

Q ss_pred             HHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         57 NLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        57 ~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      .|..|++.+.+ .+++.|..|+..|. ...|..|+ .+.+++|+
T Consensus         4 ~L~~H~~~~c~-~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~   44 (75)
T 2d9k_A            4 GSSGHEETECP-LRLAVCQHCDLELS-ILKLKEHE-DYCGARTE   44 (75)
T ss_dssp             CCSCCCCCCCC-CCCEECSSSCCEEC-HHHHHHHH-HHHHHCEE
T ss_pred             HHHhhCcccCC-CcccCCcccChHhh-HHHHHHHH-hHcCCCce
Confidence            45678888888 78999999999995 99999999 88888764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.27  E-value=6.9e-05  Score=40.72  Aligned_cols=30  Identities=20%  Similarity=0.298  Sum_probs=26.0

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhh
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRV   64 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~   64 (101)
                      ..+.|.+||.|..|++.|...+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            357788899999999999999999999764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.04  E-value=0.00016  Score=39.31  Aligned_cols=29  Identities=24%  Similarity=0.327  Sum_probs=25.3

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHHH
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      -|+| ..+|.|..|++.|.+...|..|+++
T Consensus        44 d~tG-ekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPG-GGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGG-GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCC-CcceEcccCcchhCCHHHHHHHHhh
Confidence            3667 6789999999999999999999874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.46  E-value=0.0026  Score=34.68  Aligned_cols=53  Identities=15%  Similarity=0.323  Sum_probs=41.3

Q ss_pred             CcccccCcchhhccChHHHHHHh--hhhhC------------------------------CCCceeccccccccCChHHH
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHL--RVECG------------------------------KEPSQMCLFCSYKCKHKTDI   87 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~--~~h~~------------------------------~~~~~~c~~c~~~f~~~~~l   87 (101)
                      .+++.|..|...|.+.+.+..|.  +.|..                              ....+-|..|...|.+...+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            35899999999999999888886  22311                              02246699999999999999


Q ss_pred             HHHHH
Q psy10080         88 MHHMR   92 (101)
Q Consensus        88 ~~h~~   92 (101)
                      ..|..
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99974

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.89  E-value=0.013  Score=26.16  Aligned_cols=23  Identities=22%  Similarity=0.449  Sum_probs=15.8

Q ss_pred             ccccCcchhhccChHHHHHHhhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRV   64 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~   64 (101)
                      ++.|+.|+..|.....|..|+..
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            66677777777777777777663

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.76  E-value=0.006  Score=27.30  Aligned_cols=26  Identities=19%  Similarity=0.360  Sum_probs=22.5

Q ss_pred             eeccccccccCChHHHHHHHHHhcCC
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +.|+.|+..|....+|+.|++.--++
T Consensus        13 ~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             eeCCcccccccchHHHHhhhhhcCcc
Confidence            56999999999999999999865554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.98  E-value=0.013  Score=33.23  Aligned_cols=57  Identities=18%  Similarity=0.345  Sum_probs=39.7

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCCCCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      ++..|+.|+..+ ....+..|....-. .+...|..|+..+. ...+..|..+++|++++
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~-~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCP-RRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCT-TCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCC-CCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            366788888776 45668888764444 55677999988774 56789999999998765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=93.36  E-value=0.032  Score=27.74  Aligned_cols=47  Identities=17%  Similarity=0.318  Sum_probs=33.2

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHH
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHM   91 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~   91 (101)
                      -|.|..|+..+. +..+..|...-.+ ...+.|..|+..|.. ..++.|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~-~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRN-CECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTT-CCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCC-CCcEEecccCCeeCC-CCEeCEe
Confidence            688999998776 4567888655454 446889999999974 3444443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=92.30  E-value=0.07  Score=27.09  Aligned_cols=23  Identities=26%  Similarity=0.455  Sum_probs=11.3

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      -..|-+||+.|..   |.+|...+.+
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hg   43 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHS   43 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTC
T ss_pred             ceEecccchhhHH---HHHHHHHccC
Confidence            3345555555553   4455555444

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=91.54  E-value=0.069  Score=28.05  Aligned_cols=29  Identities=14%  Similarity=0.275  Sum_probs=20.7

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceecccccccc
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKC   81 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f   81 (101)
                      .|+.|..||..|..           .- .+|..|+.|....
T Consensus        66 ~p~~C~~CG~~F~~-----------~~-~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFKA-----------EI-NIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCCC-----------CS-SCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeecc-----------cC-CCCCCCcCCCCCc
Confidence            58999999998821           11 4567899997654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.99  E-value=0.37  Score=19.95  Aligned_cols=22  Identities=14%  Similarity=0.391  Sum_probs=14.7

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      .|.|+.|.+.|.....|..|-.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHH
Confidence            3667777777777777776643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.49  E-value=0.52  Score=19.72  Aligned_cols=24  Identities=13%  Similarity=0.328  Sum_probs=14.4

Q ss_pred             ceeccccccccCChHHHHHHHHHh
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      .+.|..|+-.|....++..|.+..
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCeeccccceehhhHHHhhhheec
Confidence            345666666666666666665543

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=88.49  E-value=0.21  Score=22.88  Aligned_cols=20  Identities=25%  Similarity=0.599  Sum_probs=16.3

Q ss_pred             eeccccccccCChHHHHHHH
Q psy10080         72 QMCLFCSYKCKHKTDIMHHM   91 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~   91 (101)
                      -.|..|+..|....+++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            57888888888888888876

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=86.20  E-value=0.24  Score=29.09  Aligned_cols=26  Identities=31%  Similarity=0.666  Sum_probs=19.3

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      ...|.|..||.++.             + ..|+.|+.|+.
T Consensus       169 ~~~~~C~~CG~i~~-------------g-~~p~~CP~C~~  194 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------G-EDFEKCPICFR  194 (202)
T ss_dssp             CCEEECSSSCCEEE-------------S-SCCSBCTTTCC
T ss_pred             CcEEEECCCCCEEc-------------C-cCCCCCCCCCC
Confidence            34799999997654             2 44788999974

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.38  E-value=0.77  Score=18.62  Aligned_cols=23  Identities=30%  Similarity=0.662  Sum_probs=18.8

Q ss_pred             eeccccccccCChHHHHHHHHHh
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      -.|..|.+.++.-.+|..|++.-
T Consensus        10 qhcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            45888999999999999998753

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=84.00  E-value=0.41  Score=20.46  Aligned_cols=24  Identities=13%  Similarity=0.474  Sum_probs=16.6

Q ss_pred             ccccCcchhhccChHHHHHHhhhhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      .+.|+.|++.+.. .....|...|.
T Consensus         9 ~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            9 QVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             EEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             CcccccccCcCCc-ccccchhhHHH
Confidence            5778888887776 44566766654

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=82.98  E-value=1.5  Score=23.65  Aligned_cols=28  Identities=18%  Similarity=0.472  Sum_probs=21.2

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ..+..|-.|.+.|.....+..|++...+
T Consensus        13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           13 RQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            3477888888888888888888776554

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.73  E-value=0.93  Score=22.36  Aligned_cols=24  Identities=21%  Similarity=0.549  Sum_probs=15.2

Q ss_pred             eeccccccccC-------ChHHHHHHHHHhc
Q psy10080         72 QMCLFCSYKCK-------HKTDIMHHMRLKH   95 (101)
Q Consensus        72 ~~c~~c~~~f~-------~~~~l~~h~~~h~   95 (101)
                      -.|..|++.+.       ...+|.+|++.++
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H   59 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMH   59 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTT
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHC
Confidence            45666666654       3467888877654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=81.48  E-value=1  Score=24.28  Aligned_cols=28  Identities=18%  Similarity=0.472  Sum_probs=23.6

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhh
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      ...+...|.|..|...|.....+..|..
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456678999999999999999988854

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=81.44  E-value=1.3  Score=26.06  Aligned_cols=25  Identities=16%  Similarity=0.290  Sum_probs=20.7

Q ss_pred             CceeccccccccCC-hHHHHHHHHHh
Q psy10080         70 PSQMCLFCSYKCKH-KTDIMHHMRLK   94 (101)
Q Consensus        70 ~~~~c~~c~~~f~~-~~~l~~h~~~h   94 (101)
                      .+..|..|+..|.. ...|..|+..+
T Consensus       168 ~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          168 EDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             SCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCceeCCCCchhhcccHHHHHHHHHH
Confidence            36789999999976 89999998765

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=80.27  E-value=0.56  Score=26.76  Aligned_cols=26  Identities=27%  Similarity=0.754  Sum_probs=19.0

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      ..-|.|..||.++.             + ..|-.|+.|+.
T Consensus       136 ~~~~~C~~CG~i~~-------------~-~~p~~CP~Cg~  161 (170)
T 3pwf_A          136 KKVYICPICGYTAV-------------D-EAPEYCPVCGA  161 (170)
T ss_dssp             SCEEECTTTCCEEE-------------S-CCCSBCTTTCC
T ss_pred             CCeeEeCCCCCeeC-------------C-CCCCCCCCCCC
Confidence            34799999997764             2 34568999983

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=80.04  E-value=1.2  Score=26.30  Aligned_cols=28  Identities=21%  Similarity=0.347  Sum_probs=23.2

Q ss_pred             CcccccCcchhhccC-hHHHHHHhhhhhC
Q psy10080         40 KTTWACPMCRKIYAF-KYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~-~~~l~~h~~~h~~   67 (101)
                      +.|..|..|+..|.+ -..|..|...|-.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~~  195 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEYD  195 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHHH
Confidence            459999999999987 7899999776543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.52
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.48
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.42
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.39
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.38
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.37
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.33
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.32
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.26
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.26
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.25
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.25
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.25
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.17
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.16
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.15
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.14
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.14
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.08
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.07
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.97
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.92
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.91
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.78
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.7
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.64
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.6
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.47
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.25
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.11
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.1
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.02
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.94
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.85
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.81
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.79
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.74
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.7
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.55
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.52
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.51
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.51
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.47
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.47
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.33
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.3
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.27
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.26
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.23
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.11
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.98
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.97
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.95
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.93
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.74
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.68
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.63
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.59
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.58
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.45
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.39
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.3
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.16
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.08
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.54
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.18
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.17
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.72
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.61
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.11
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.77
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.67
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.36
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.33
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.24
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.92
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	90.3
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.23
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	89.42
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.74
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	88.38
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.21
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	87.64
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.2
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	86.39
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.3
d1lkoa2	44	Rubrerythrin, C-terminal domain {Desulfovibrio vul	84.43
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	81.76
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	81.6
d1fu9a_	36	U-shaped transcription factor, different fingers {	81.21

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.2e-19  Score=84.80  Aligned_cols=53  Identities=26%  Similarity=0.531  Sum_probs=50.4

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccCChHHHHHHHHHh
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      ++||.| .||+.|.....|..|+++|++ ++||.|..|+++|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~-ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhcccc-ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            579999 599999999999999999999 88999999999999999999999886

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=9.9e-16  Score=66.23  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=29.8

Q ss_pred             HHhhhhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         60 RHLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        60 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +|+++|++ ++||.|..||++|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~-ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCC-CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            46777888 77888888888888888888888888876

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.6e-14  Score=60.10  Aligned_cols=33  Identities=21%  Similarity=0.453  Sum_probs=23.1

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +|++ ++||.|..|+++|.+.++|..|+++|+||
T Consensus         1 IHTg-ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCC-CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            3566 66677777777777777777777777765

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=6.1e-14  Score=58.35  Aligned_cols=32  Identities=25%  Similarity=0.508  Sum_probs=30.7

Q ss_pred             ccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         36 KEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        36 ~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +|++++||.|..|++.|...+.|..|+++|++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            48899999999999999999999999999998

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.39  E-value=1.2e-13  Score=55.88  Aligned_cols=29  Identities=21%  Similarity=0.379  Sum_probs=23.5

Q ss_pred             CceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +||.|..|+++|.+.+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46788888888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.6e-13  Score=55.42  Aligned_cols=29  Identities=10%  Similarity=0.292  Sum_probs=23.3

Q ss_pred             CceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +||.|..|+++|.+.+.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46788888888888888888888888875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.7e-13  Score=59.03  Aligned_cols=36  Identities=19%  Similarity=0.482  Sum_probs=33.2

Q ss_pred             eecccCCCcccccCcchhhccChHHHHHHhhhhhCC
Q psy10080         33 NVDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECGK   68 (101)
Q Consensus        33 ~~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~~   68 (101)
                      +..+|.+++||.|..|++.|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            456899999999999999999999999999999983

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.7e-13  Score=58.41  Aligned_cols=33  Identities=24%  Similarity=0.544  Sum_probs=16.4

Q ss_pred             cccccCcchhhccChHHHHHHhh-hhhCCCCceec
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLR-VECGKEPSQMC   74 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~-~h~~~~~~~~c   74 (101)
                      +||.|..|++.|...+.|..|++ +|++ ++||.|
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C   37 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKC   37 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCC-CcCcCC
Confidence            45555555555555555555532 3555 444544

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.4e-13  Score=56.99  Aligned_cols=33  Identities=21%  Similarity=0.401  Sum_probs=19.7

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +|++ ++||.|..|+++|.+.++|..|+++|+++
T Consensus         2 ~HTg-ekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTG-EKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCC-CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCC-CCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4555 55566666666666666666666666544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=2.9e-13  Score=57.92  Aligned_cols=34  Identities=15%  Similarity=0.192  Sum_probs=21.3

Q ss_pred             HhhhhhCCCCceeccccccccCChHHHHHHHHHhc
Q psy10080         61 HLRVECGKEPSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        61 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.++|++ ++||.|..|+++|.+..+|..|+++|.
T Consensus         2 h~R~HTg-eKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCC-ccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4456666 556666666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.8e-13  Score=57.95  Aligned_cols=33  Identities=12%  Similarity=0.271  Sum_probs=30.6

Q ss_pred             CCceeccccccccCChHHHHHHHH-HhcCCCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMR-LKHKEFKIE  101 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~-~h~~e~~~~  101 (101)
                      .+||.|..||+.|.+..+|..|++ +|+||+||+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~   36 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   36 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcC
Confidence            578999999999999999999975 799999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=5.3e-13  Score=53.39  Aligned_cols=27  Identities=15%  Similarity=0.359  Sum_probs=19.8

Q ss_pred             CceeccccccccCChHHHHHHHHHhcC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      +||.|..|+++|.+..+|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            467777777777777777777777765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-12  Score=50.77  Aligned_cols=25  Identities=20%  Similarity=0.541  Sum_probs=16.2

Q ss_pred             ceeccccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ||.|..||++|.+.++|..|+|+|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            5666666666666666666666664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1.7e-12  Score=54.57  Aligned_cols=30  Identities=30%  Similarity=0.608  Sum_probs=15.8

Q ss_pred             CCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         38 GKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        38 ~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +|++||.|..|++.|...++|..|+++|+.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCC
Confidence            445555555555555555555555555543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2e-12  Score=54.88  Aligned_cols=33  Identities=21%  Similarity=0.353  Sum_probs=31.2

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .+|+|++||.|..|++.|...+.|..|+++|.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            368999999999999999999999999999987

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=2.8e-12  Score=54.77  Aligned_cols=34  Identities=15%  Similarity=0.281  Sum_probs=31.5

Q ss_pred             ecccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         34 VDKEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        34 ~~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ...|++++||.|..|++.|...+.|..|++.|..
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            4689999999999999999999999999999864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.7e-12  Score=51.90  Aligned_cols=28  Identities=21%  Similarity=0.627  Sum_probs=26.6

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ++||.|..|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5799999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=2.1e-12  Score=54.28  Aligned_cols=32  Identities=16%  Similarity=0.436  Sum_probs=29.7

Q ss_pred             hhCCCCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         65 ECGKEPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        65 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      |+| ++||.|..|++.|.+..+|..|+++|+.+
T Consensus         2 ~TG-ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSG-KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSC-CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCC-CccccCCCCCCcccChHHHHHHccccCCc
Confidence            577 88999999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.5e-12  Score=50.23  Aligned_cols=26  Identities=23%  Similarity=0.588  Sum_probs=24.7

Q ss_pred             cccccCcchhhccChHHHHHHhhhhh
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      +||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            59999999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.2e-11  Score=50.09  Aligned_cols=28  Identities=21%  Similarity=0.496  Sum_probs=21.7

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHhcCC
Q psy10080         70 PSQMCLF--CSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        70 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +||.|..  |+++|.+.++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3677766  888888888888888888876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.16  E-value=8.2e-12  Score=50.35  Aligned_cols=28  Identities=25%  Similarity=0.638  Sum_probs=26.6

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGK   68 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~   68 (101)
                      +||.|+.|++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            5999999999999999999999999993

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.15  E-value=1.4e-12  Score=58.47  Aligned_cols=39  Identities=21%  Similarity=0.468  Sum_probs=27.1

Q ss_pred             HHHHhhhhhCCCCceeccc--cccccCChHHHHHHHHHhcCCC
Q psy10080         58 LMRHLRVECGKEPSQMCLF--CSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        58 l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +..|+. |.+ ++||.|..  |++.|...++|..|+++|+||+
T Consensus         7 l~~h~~-h~g-ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccC-CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            334443 677 66777765  7777777777777777777764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.2e-11  Score=52.32  Aligned_cols=28  Identities=18%  Similarity=0.438  Sum_probs=15.0

Q ss_pred             hhhCCCCceeccccccccCChHHHHHHHH
Q psy10080         64 VECGKEPSQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        64 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      +|+| ++||.|..|++.|.+..+|..|++
T Consensus         2 ~HTg-ekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSG-EKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSC-CCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCC-CCCEeCCCCcccccchHHHHHHcc
Confidence            3455 445555555555555555555543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.7e-11  Score=49.71  Aligned_cols=28  Identities=18%  Similarity=0.496  Sum_probs=20.6

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHhcCC
Q psy10080         70 PSQMCLF--CSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        70 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      +||.|..  |+++|....+|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3677755  777777777777777777775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.4e-11  Score=49.60  Aligned_cols=27  Identities=26%  Similarity=0.613  Sum_probs=26.2

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|+.|++.|...+.|..|+++|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            599999999999999999999999998

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.5e-11  Score=50.45  Aligned_cols=24  Identities=21%  Similarity=0.414  Sum_probs=13.2

Q ss_pred             cccccCChHHHHHHHHHhcCCCCC
Q psy10080         77 CSYKCKHKTDIMHHMRLKHKEFKI  100 (101)
Q Consensus        77 c~~~f~~~~~l~~h~~~h~~e~~~  100 (101)
                      |++.|.+...|.+|+++|+|++||
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy   32 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDY   32 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCE
Confidence            555555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.2e-11  Score=50.65  Aligned_cols=33  Identities=9%  Similarity=0.289  Sum_probs=28.8

Q ss_pred             cccCCCcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         35 DKEGKKTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        35 ~~~~~~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .+|+|++||.|+.|++.|...++|..|++.+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            368999999999999999999999999765433

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.1e-11  Score=48.93  Aligned_cols=29  Identities=21%  Similarity=0.479  Sum_probs=21.7

Q ss_pred             Cceecc--ccccccCChHHHHHHHHHhcCCC
Q psy10080         70 PSQMCL--FCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        70 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      +||.|+  .|++.|.+..+|..|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            367774  58888888888888888888774

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.4e-10  Score=46.83  Aligned_cols=27  Identities=41%  Similarity=0.705  Sum_probs=25.7

Q ss_pred             cccccCc--chhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPM--CRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~--c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|..  |++.|...+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5999988  99999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.6e-10  Score=46.71  Aligned_cols=27  Identities=30%  Similarity=0.862  Sum_probs=25.5

Q ss_pred             cccccCc--chhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPM--CRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~--c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|+.  |++.|...+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            5999977  99999999999999999998

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.8e-10  Score=52.93  Aligned_cols=32  Identities=19%  Similarity=0.254  Sum_probs=29.0

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      ++||.|. ||++|....+|..|+++|+|++||+
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~   32 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG   32 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEE
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCc
Confidence            3589994 9999999999999999999999873

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3.2e-10  Score=47.77  Aligned_cols=32  Identities=28%  Similarity=0.768  Sum_probs=28.9

Q ss_pred             cccCc--chhhccChHHHHHHhhhhhCCCCceecc
Q psy10080         43 WACPM--CRKIYAFKYNLMRHLRVECGKEPSQMCL   75 (101)
Q Consensus        43 ~~C~~--c~~~~~~~~~l~~h~~~h~~~~~~~~c~   75 (101)
                      |.|+.  |++.|...+.|.+|+++|++ ++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg-ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC-CCCEeCC
Confidence            56765  99999999999999999999 8899885

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=2.1e-10  Score=51.23  Aligned_cols=36  Identities=28%  Similarity=0.541  Sum_probs=32.0

Q ss_pred             cceecccCCCcccccCc--chhhccChHHHHHHhhhhhC
Q psy10080         31 PYNVDKEGKKTTWACPM--CRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        31 ~~~~~~~~~~~p~~C~~--c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ..+. .|.+++||.|..  |++.|...+.|..|+++|++
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            3444 488999999987  99999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=4.1e-10  Score=45.08  Aligned_cols=26  Identities=19%  Similarity=0.558  Sum_probs=16.6

Q ss_pred             ceeccc--cccccCChHHHHHHHHHhcC
Q psy10080         71 SQMCLF--CSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        71 ~~~c~~--c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ||.|..  |+++|....+|..|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            566644  66666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=1.1e-09  Score=43.82  Aligned_cols=27  Identities=33%  Similarity=0.899  Sum_probs=25.1

Q ss_pred             cccccCc--chhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPM--CRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~--c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|+.  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5999977  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.78  E-value=2.3e-09  Score=43.82  Aligned_cols=26  Identities=15%  Similarity=0.406  Sum_probs=14.9

Q ss_pred             ceeccc--cccccCChHHHHHHHHHhcC
Q psy10080         71 SQMCLF--CSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        71 ~~~c~~--c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ||.|..  |+++|....+|.+|+++|+.
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            455544  55666666666666555554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2e-09  Score=43.77  Aligned_cols=27  Identities=30%  Similarity=0.605  Sum_probs=25.1

Q ss_pred             cccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|+  .|++.|...++|..|+++|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            589995  699999999999999999998

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2e-09  Score=42.58  Aligned_cols=25  Identities=24%  Similarity=0.545  Sum_probs=17.2

Q ss_pred             ceeccc--cccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLF--CSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~--c~~~f~~~~~l~~h~~~h~   95 (101)
                      ||.|..  |+++|....+|..|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            566655  7777777777777777764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=5e-09  Score=42.79  Aligned_cols=28  Identities=21%  Similarity=0.542  Sum_probs=26.0

Q ss_pred             CcccccCc--chhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACPM--CRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~--c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ++||.|..  |++.|...+.|..|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57999987  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=7.2e-09  Score=38.56  Aligned_cols=24  Identities=29%  Similarity=0.612  Sum_probs=11.9

Q ss_pred             cccCcchhhccChHHHHHHhhhhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      ++|..|++.|+.+..|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            445555555555555555554443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=3.6e-09  Score=41.84  Aligned_cols=26  Identities=31%  Similarity=0.699  Sum_probs=24.0

Q ss_pred             cccccCc--chhhccChHHHHHHhhhhh
Q psy10080         41 TTWACPM--CRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        41 ~p~~C~~--c~~~~~~~~~l~~h~~~h~   66 (101)
                      +||.|+.  |++.|...++|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899987  9999999999999999885

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1e-08  Score=38.13  Aligned_cols=26  Identities=23%  Similarity=0.429  Sum_probs=24.0

Q ss_pred             ceeccccccccCChHHHHHHHHHhcC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      |..|..|++.|+....|.-|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45799999999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.5e-08  Score=38.65  Aligned_cols=30  Identities=13%  Similarity=0.161  Sum_probs=22.8

Q ss_pred             eeccccccccCChHHHHHHHHHhcCCCCCC
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKHKEFKIE  101 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~~e~~~~  101 (101)
                      .-|..||+.|...-.|++|...|++|+||.
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            457778888877777888877788887773

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5.4e-08  Score=36.84  Aligned_cols=26  Identities=15%  Similarity=0.360  Sum_probs=18.7

Q ss_pred             eeccccccccCChHHHHHHHHHhcCC
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ..|..||++|...+.|.+|+.+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35777777777777777777777765

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=1.7e-07  Score=35.84  Aligned_cols=26  Identities=15%  Similarity=0.346  Sum_probs=17.9

Q ss_pred             CceeccccccccCChHHHHHHHHHhc
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      +||.|..||+.|..+....+|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            46777777777777777777766663

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=3e-07  Score=35.17  Aligned_cols=27  Identities=22%  Similarity=0.554  Sum_probs=24.4

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhh
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      ++||.|..||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            479999999999999999999988874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=6.6e-07  Score=34.12  Aligned_cols=27  Identities=19%  Similarity=0.387  Sum_probs=22.3

Q ss_pred             eeccccccccCChHHHHHHHHHhcCCC
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      |.|..|+......+-|..|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            578888888888888888888888763

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.7e-07  Score=35.43  Aligned_cols=27  Identities=26%  Similarity=0.608  Sum_probs=16.2

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|+.|.+.|..+....-|.++|-|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            466666666666666655556555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5e-07  Score=34.12  Aligned_cols=26  Identities=31%  Similarity=0.535  Sum_probs=24.0

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      -+.|.+||+.|.-.+.|.+|+-+|++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccC
Confidence            46799999999999999999999987

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6e-07  Score=34.07  Aligned_cols=27  Identities=19%  Similarity=0.532  Sum_probs=20.6

Q ss_pred             CceeccccccccCChHHHHHHHHHhcC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      +||+|+.|...-..++.|.-|+|.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            467787787777777777778777776

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=8.3e-07  Score=35.17  Aligned_cols=31  Identities=35%  Similarity=0.585  Sum_probs=27.7

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCce
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQ   72 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~   72 (101)
                      +...|..||+.|.....|.+|.-+|++ ++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~-ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSG-EKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCS-CCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCC-CCCC
Confidence            456899999999999999999999999 7776

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=2.2e-06  Score=31.86  Aligned_cols=26  Identities=27%  Similarity=0.234  Sum_probs=19.7

Q ss_pred             eccccccccCChHHHHHHHHHhcCCC
Q psy10080         73 MCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        73 ~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      .|+.|.++|.+...|.-|.|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777777877777877777777764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.04  E-value=1.6e-06  Score=31.78  Aligned_cols=24  Identities=33%  Similarity=0.679  Sum_probs=15.9

Q ss_pred             cccCcchhhccChHHHHHHhhhhh
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      |+|..|++.|.-++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            456667777777777777766653

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=3.4e-06  Score=32.63  Aligned_cols=29  Identities=24%  Similarity=0.453  Sum_probs=26.4

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ++||.|+.|...|.....+..|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            35899999999999999999999999874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=5.5e-06  Score=31.98  Aligned_cols=26  Identities=15%  Similarity=0.521  Sum_probs=17.8

Q ss_pred             ceeccc--cccccCChHHHHHHHHHhcC
Q psy10080         71 SQMCLF--CSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        71 ~~~c~~--c~~~f~~~~~l~~h~~~h~~   96 (101)
                      ||.|..  |++++...++|+.|++.++|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            566654  67777777777777776554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6.9e-06  Score=30.82  Aligned_cols=26  Identities=19%  Similarity=0.562  Sum_probs=22.0

Q ss_pred             CceeccccccccCChHHHHHHHHHhc
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      +|+.|..|..+-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57888888888888889999988874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.85  E-value=4.7e-06  Score=34.45  Aligned_cols=26  Identities=19%  Similarity=0.544  Sum_probs=14.6

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .|.|..|++.|.+..+|..|++.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            45555555555555555555555544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5e-06  Score=31.44  Aligned_cols=28  Identities=25%  Similarity=0.485  Sum_probs=25.3

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhC
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      ++||+|..|...-...+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4799999999988899999999998886

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.81  E-value=1.4e-05  Score=32.95  Aligned_cols=30  Identities=20%  Similarity=0.452  Sum_probs=26.5

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKEF   98 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e~   98 (101)
                      .+.|.|..|++.|.+..+|-.|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            346899999999999999999999997663

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.79  E-value=8.4e-06  Score=30.90  Aligned_cols=24  Identities=33%  Similarity=0.791  Sum_probs=12.8

Q ss_pred             ccccCc--chhhccChHHHHHHhhhh
Q psy10080         42 TWACPM--CRKIYAFKYNLMRHLRVE   65 (101)
Q Consensus        42 p~~C~~--c~~~~~~~~~l~~h~~~h   65 (101)
                      ||.|+.  |++.|..++.|.+|..+|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            455542  555555555555555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.2e-05  Score=33.46  Aligned_cols=25  Identities=12%  Similarity=0.293  Sum_probs=20.0

Q ss_pred             CCceeccccccccCChHHHHHHHHH
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      .+||.|..|++.|.+..++.+|...
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhhh
Confidence            5688888888888888888887653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=3.4e-05  Score=29.21  Aligned_cols=28  Identities=18%  Similarity=0.355  Sum_probs=23.1

Q ss_pred             CceeccccccccCChHHHHHHHHHhcCC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ..|.|..|...|.....|+-|+-.|+||
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3578888888888888888888888876

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.4e-05  Score=29.21  Aligned_cols=24  Identities=21%  Similarity=0.459  Sum_probs=21.8

Q ss_pred             eeccccccccCChHHHHHHHHHhc
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.|-.|.++|-..++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            568899999999999999999884

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.5e-05  Score=29.84  Aligned_cols=26  Identities=27%  Similarity=0.515  Sum_probs=23.9

Q ss_pred             cccccCcchhhccChHHHHHHhhhhh
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      +||+|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            69999999999999999999999885

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=2.1e-05  Score=30.28  Aligned_cols=26  Identities=23%  Similarity=0.575  Sum_probs=22.3

Q ss_pred             cccccCc--chhhccChHHHHHHhhhhh
Q psy10080         41 TTWACPM--CRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        41 ~p~~C~~--c~~~~~~~~~l~~h~~~h~   66 (101)
                      +||.|..  |++.+..++.|..|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5888976  9999999999999988644

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=4e-05  Score=31.89  Aligned_cols=26  Identities=19%  Similarity=0.599  Sum_probs=22.8

Q ss_pred             CCcccccCcchhhccChHHHHHHhhh
Q psy10080         39 KKTTWACPMCRKIYAFKYNLMRHLRV   64 (101)
Q Consensus        39 ~~~p~~C~~c~~~~~~~~~l~~h~~~   64 (101)
                      |-+||.|..|++.|-+...+.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56799999999999999999988553

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.51  E-value=5.9e-05  Score=28.50  Aligned_cols=26  Identities=12%  Similarity=0.314  Sum_probs=22.3

Q ss_pred             Cceeccc--cccccCChHHHHHHHHHhc
Q psy10080         70 PSQMCLF--CSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        70 ~~~~c~~--c~~~f~~~~~l~~h~~~h~   95 (101)
                      .||.|+.  |++.|...+-|.+|..+|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            3688864  9999999999999999873

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=4.4e-05  Score=28.23  Aligned_cols=24  Identities=42%  Similarity=0.771  Sum_probs=22.7

Q ss_pred             ccCcchhhccChHHHHHHhhhhhC
Q psy10080         44 ACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        44 ~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +|+.|.+.|.++..|..|.+-|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            699999999999999999999998

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.47  E-value=2.2e-05  Score=30.55  Aligned_cols=20  Identities=25%  Similarity=0.791  Sum_probs=9.8

Q ss_pred             ccccCcchhhccChHHHHHH
Q psy10080         42 TWACPMCRKIYAFKYNLMRH   61 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h   61 (101)
                      ||.|..|++.|.....|.+|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH   20 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRH   20 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHH
Confidence            34455555555554444444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.47  E-value=5.3e-05  Score=28.76  Aligned_cols=27  Identities=15%  Similarity=0.149  Sum_probs=18.7

Q ss_pred             ceecc--ccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCL--FCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~--~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ||.|.  .|.+.|.+...|.+|...|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            55554  3777777777777777777765

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=7.6e-05  Score=27.98  Aligned_cols=25  Identities=32%  Similarity=0.699  Sum_probs=21.4

Q ss_pred             ceeccccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |.+|+.|.++.++..+|+-|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578899999999999999999884

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=8.4e-05  Score=28.13  Aligned_cols=25  Identities=20%  Similarity=0.355  Sum_probs=23.4

Q ss_pred             cccCcchhhccChHHHHHHhhhhhC
Q psy10080         43 WACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      |.|..|+.....++.|..|.+.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            7899999999999999999999998

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00015  Score=27.58  Aligned_cols=27  Identities=19%  Similarity=0.702  Sum_probs=18.8

Q ss_pred             CceeccccccccCChHHHHHHHHHhcC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      +||.|+.|.......++|..|+.+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            367777777777777777777776554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=6e-05  Score=28.56  Aligned_cols=22  Identities=27%  Similarity=0.676  Sum_probs=14.5

Q ss_pred             ccccCcchhhccChHHHHHHhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      ||.|..|.-.|..+.+|..|+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            5666666666666666666655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.00013  Score=26.53  Aligned_cols=22  Identities=32%  Similarity=0.514  Sum_probs=17.3

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      ||.|..|...|.+...|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6778888888888888887753

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.26  E-value=0.0001  Score=28.58  Aligned_cols=26  Identities=12%  Similarity=0.373  Sum_probs=22.2

Q ss_pred             ceeccccccccCChHHHHHHHH-HhcC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMR-LKHK   96 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~-~h~~   96 (101)
                      ||.|..|++.|....-|.+|+. +|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6899999999999999999965 4544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=2.9e-05  Score=30.17  Aligned_cols=21  Identities=19%  Similarity=0.542  Sum_probs=10.2

Q ss_pred             ccccCc--chhhccChHHHHHHh
Q psy10080         42 TWACPM--CRKIYAFKYNLMRHL   62 (101)
Q Consensus        42 p~~C~~--c~~~~~~~~~l~~h~   62 (101)
                      ||.|..  |.+.|+..+.-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444433  555555555444443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00011  Score=27.34  Aligned_cols=20  Identities=45%  Similarity=0.896  Sum_probs=10.9

Q ss_pred             ccccCcchhhccChHHHHHH
Q psy10080         42 TWACPMCRKIYAFKYNLMRH   61 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h   61 (101)
                      ||+|..||+.+-.+.+|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            45555555555555555555

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=9.5e-05  Score=28.68  Aligned_cols=27  Identities=26%  Similarity=0.440  Sum_probs=22.8

Q ss_pred             Cceeccc--cccccCChHHHHHHH-HHhcC
Q psy10080         70 PSQMCLF--CSYKCKHKTDIMHHM-RLKHK   96 (101)
Q Consensus        70 ~~~~c~~--c~~~f~~~~~l~~h~-~~h~~   96 (101)
                      +||.|..  |.++|+..+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4788876  999999999999997 77754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.98  E-value=0.00037  Score=25.87  Aligned_cols=22  Identities=18%  Similarity=0.308  Sum_probs=19.8

Q ss_pred             ceeccccccccCChHHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      ||.|..||+.+....+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999999864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00035  Score=26.47  Aligned_cols=22  Identities=23%  Similarity=0.472  Sum_probs=10.6

Q ss_pred             ccccCcchhhccChHHHHHHhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      ||+|..|.--..+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4555555444444455555443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00027  Score=28.24  Aligned_cols=19  Identities=26%  Similarity=0.244  Sum_probs=10.1

Q ss_pred             cccCChHHHHHHHHHhcCC
Q psy10080         79 YKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        79 ~~f~~~~~l~~h~~~h~~e   97 (101)
                      +.|.....|..|+|.||||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3455555555555555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.00025  Score=25.74  Aligned_cols=22  Identities=23%  Similarity=0.599  Sum_probs=20.0

Q ss_pred             ccccCcchhhccChHHHHHHhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      ||+|..|.+.|-.+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999988864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.80  E-value=0.00042  Score=26.21  Aligned_cols=27  Identities=26%  Similarity=0.472  Sum_probs=22.7

Q ss_pred             cccccC--cchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACP--MCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~--~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      +||.|.  .|.+.|...-.|.+|.-.|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            466775  599999999999999888887

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.001  Score=25.10  Aligned_cols=27  Identities=26%  Similarity=0.616  Sum_probs=23.0

Q ss_pred             CceeccccccccCChHHHHHHHHHhcC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHK   96 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   96 (101)
                      +||.|..|.-...+.++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            489999999888999999999876544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.001  Score=25.20  Aligned_cols=26  Identities=27%  Similarity=0.457  Sum_probs=22.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhh
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      +||+|..|...-...++|..|...-.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            59999999988888999999988643

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.63  E-value=0.001  Score=25.03  Aligned_cols=27  Identities=19%  Similarity=0.598  Sum_probs=24.7

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .-|.|..|...|...-.|..|+-+|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            368899999999999999999999987

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0014  Score=24.70  Aligned_cols=25  Identities=28%  Similarity=0.704  Sum_probs=22.2

Q ss_pred             ceeccccccccCChHHHHHHHHHhc
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ||.|..|.-+|....+|..|+...+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6889999999999999999998643

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0012  Score=26.08  Aligned_cols=27  Identities=11%  Similarity=0.229  Sum_probs=21.2

Q ss_pred             ceeccccccccCChHHHHHHHHHhcCC
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .|.|..|+++|.....+.+|....+|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            478888888888888888887766653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0011  Score=27.02  Aligned_cols=27  Identities=19%  Similarity=0.396  Sum_probs=16.4

Q ss_pred             Cccccc--CcchhhccChHHHHHHhhhhh
Q psy10080         40 KTTWAC--PMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        40 ~~p~~C--~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      ++||.|  +.|++.|.+.-.|..|..-|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            456666  446666666666666655443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0014  Score=26.09  Aligned_cols=23  Identities=26%  Similarity=0.525  Sum_probs=18.7

Q ss_pred             cCcchhhccChHHHHHHhhhhhC
Q psy10080         45 CPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        45 C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      |+.-++.|.....|..|+++|++
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCC
Confidence            33344679999999999999998

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0028  Score=25.80  Aligned_cols=27  Identities=11%  Similarity=0.321  Sum_probs=23.7

Q ss_pred             CCceec--cccccccCChHHHHHHHHHhc
Q psy10080         69 EPSQMC--LFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        69 ~~~~~c--~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      .+||.|  +.|+..|.....|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            679999  569999999999999988775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.002  Score=23.94  Aligned_cols=25  Identities=28%  Similarity=0.454  Sum_probs=21.7

Q ss_pred             ccccCcchhhccChHHHHHHhhhhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVEC   66 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~   66 (101)
                      |-+|+.|....+++..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5679999999999999999988874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0019  Score=27.67  Aligned_cols=26  Identities=19%  Similarity=0.363  Sum_probs=22.0

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      -+.|-.|+|.|.....|..|...|.-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            57899999999999999999887743

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.54  E-value=0.014  Score=24.79  Aligned_cols=28  Identities=18%  Similarity=0.483  Sum_probs=15.7

Q ss_pred             CceeccccccccCChHHHHHHHHHhcCC
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      .|..|+.|+-...++-+|.+|+.+.+-.
T Consensus        23 qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            3455666666666666666665554433

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.014  Score=24.90  Aligned_cols=26  Identities=12%  Similarity=0.163  Sum_probs=22.4

Q ss_pred             CceeccccccccCChHHHHHHHHHhc
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      ..+.|-.|++.|.....|++|..-|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999987663

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.17  E-value=0.017  Score=20.77  Aligned_cols=23  Identities=22%  Similarity=0.541  Sum_probs=14.6

Q ss_pred             eeccccccccCChHHHHHHHHHh
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~~h   94 (101)
                      |.|+.|-+.|....++..|..+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            45666666666666666666543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.72  E-value=0.024  Score=21.54  Aligned_cols=26  Identities=15%  Similarity=0.321  Sum_probs=21.5

Q ss_pred             eec--cccccccCChHHHHHHHHHhcCC
Q psy10080         72 QMC--LFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        72 ~~c--~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      |.|  +.|+-+|....-|..|+-.|+||
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            555  45888999999999999989886

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.027  Score=20.71  Aligned_cols=21  Identities=29%  Similarity=0.523  Sum_probs=10.1

Q ss_pred             eeccccccccCChHHHHHHHH
Q psy10080         72 QMCLFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        72 ~~c~~c~~~f~~~~~l~~h~~   92 (101)
                      |.|+.|+.....++.|.-|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            344445444444555544444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.11  E-value=0.03  Score=21.71  Aligned_cols=23  Identities=22%  Similarity=0.413  Sum_probs=17.6

Q ss_pred             ceeccccccccCChHHHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      .|.|.-||-.|++.+.|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            36788888888888888887643

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.016  Score=26.82  Aligned_cols=19  Identities=26%  Similarity=0.548  Sum_probs=9.7

Q ss_pred             eccccccccCChHHHHHHH
Q psy10080         73 MCLFCSYKCKHKTDIMHHM   91 (101)
Q Consensus        73 ~c~~c~~~f~~~~~l~~h~   91 (101)
                      -|..|++.|.+...|..|.
T Consensus        17 YCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          17 RCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             EETTTTEECSSHHHHHHHT
T ss_pred             ecccccCccCCHHHHHHHH
Confidence            3555555555555555544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.67  E-value=0.019  Score=26.20  Aligned_cols=26  Identities=23%  Similarity=0.455  Sum_probs=14.9

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhC
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .|+|..|...|.....|..|...|+.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhccH
Confidence            55666666556555556555555543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.043  Score=20.26  Aligned_cols=19  Identities=11%  Similarity=0.329  Sum_probs=14.3

Q ss_pred             ccccccCChHHHHHHHHHh
Q psy10080         76 FCSYKCKHKTDIMHHMRLK   94 (101)
Q Consensus        76 ~c~~~f~~~~~l~~h~~~h   94 (101)
                      .|.+.|...++++.|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3777888888888877665

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.33  E-value=0.11  Score=20.29  Aligned_cols=21  Identities=24%  Similarity=0.501  Sum_probs=12.1

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHM   91 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~   91 (101)
                      .|.|..|.+.+.+.+++-+|-
T Consensus         8 ~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHH
Confidence            355666666666665555553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.24  E-value=0.058  Score=19.62  Aligned_cols=18  Identities=22%  Similarity=0.287  Sum_probs=9.2

Q ss_pred             chhhccChHHHHHHhhhh
Q psy10080         48 CRKIYAFKYNLMRHLRVE   65 (101)
Q Consensus        48 c~~~~~~~~~l~~h~~~h   65 (101)
                      |++.|.....|..|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555554444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.92  E-value=0.028  Score=26.00  Aligned_cols=22  Identities=27%  Similarity=0.540  Sum_probs=20.4

Q ss_pred             ccccCcchhhccChHHHHHHhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      .|.|..|.+.|.+...|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            6899999999999999999976

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.23  E-value=0.035  Score=22.53  Aligned_cols=25  Identities=24%  Similarity=0.740  Sum_probs=17.4

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      +-|.|..||.++             .+ ..|..|++|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g-~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VD-EAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ES-CCCSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cC-CCCCcCCCCCC
Confidence            468899998543             34 45677888874

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.42  E-value=0.05  Score=21.91  Aligned_cols=26  Identities=31%  Similarity=0.668  Sum_probs=17.7

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      ++-|.|..||.+             +.+ ..|-.|+.|+.
T Consensus         3 ~~~~vC~vCGyi-------------~~g-~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKG-EDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EES-SCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeC-CCCCcCCCCCC
Confidence            346888888854             334 45677888874

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.74  E-value=0.096  Score=23.73  Aligned_cols=37  Identities=16%  Similarity=0.441  Sum_probs=24.0

Q ss_pred             CcccccCcchhhccChHHHHHHhhhhhCCCCceeccccccc
Q psy10080         40 KTTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYK   80 (101)
Q Consensus        40 ~~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~   80 (101)
                      ..-|.|+.|++.|..--.+..   +-.. .-.|.|..|+..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~-~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPM-TGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETT-TTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcC-CCeEEecCCCCE
Confidence            447999999999886544322   2111 336889888754

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.38  E-value=0.13  Score=20.30  Aligned_cols=22  Identities=18%  Similarity=0.546  Sum_probs=14.5

Q ss_pred             ccccCcchhhccChHHHHHHhh
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLR   63 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~   63 (101)
                      ...|-+|-+.|...-.+++|+.
T Consensus         3 kltclecmrtfkssfsiwrhqv   24 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQV   24 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHhhh
Confidence            3456677777777777777654

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.21  E-value=0.27  Score=22.23  Aligned_cols=29  Identities=17%  Similarity=0.534  Sum_probs=25.3

Q ss_pred             CCceeccccccccCChHHHHHHHHHhcCC
Q psy10080         69 EPSQMCLFCSYKCKHKTDIMHHMRLKHKE   97 (101)
Q Consensus        69 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~e   97 (101)
                      ...|.|..|...|.+...|..|+..|..+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            34699999999999999999999988755

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.64  E-value=0.094  Score=26.29  Aligned_cols=30  Identities=13%  Similarity=0.289  Sum_probs=21.6

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhCCCCceeccccccccC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSYKCK   82 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   82 (101)
                      .|-.|..||..|...           - .+|..|+.|.....
T Consensus        66 ~Pp~CrkCGfvFr~~-----------~-kkPSRCP~CKSE~I   95 (105)
T d2gmga1          66 KPAQCRKCGFVFKAE-----------I-NIPSRCPKCKSEWI   95 (105)
T ss_dssp             CCCBBTTTCCBCCCC-----------S-SCCSSCSSSCCCCB
T ss_pred             eChhhhhcCCeeccc-----------C-CCCCCCCCCCCccc
Confidence            488999999888421           1 56788999976543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.20  E-value=0.34  Score=17.83  Aligned_cols=18  Identities=17%  Similarity=0.276  Sum_probs=11.8

Q ss_pred             cccccccCChHHHHHHHH
Q psy10080         75 LFCSYKCKHKTDIMHHMR   92 (101)
Q Consensus        75 ~~c~~~f~~~~~l~~h~~   92 (101)
                      +.|++.|+....|+.|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            346777777777766654

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.39  E-value=0.16  Score=21.49  Aligned_cols=21  Identities=24%  Similarity=0.572  Sum_probs=16.8

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy10080         71 SQMCLFCSYKCKHKTDIMHHM   91 (101)
Q Consensus        71 ~~~c~~c~~~f~~~~~l~~h~   91 (101)
                      +-.|..|+..++...+++.|+
T Consensus         6 ~~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           6 KPECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             CSCCTTTTCCCCSSSCHHHHH
T ss_pred             cccCcccceeeeeecchHhhh
Confidence            457888988888888888775

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.30  E-value=0.44  Score=17.58  Aligned_cols=19  Identities=21%  Similarity=0.411  Sum_probs=11.5

Q ss_pred             cccCcchhhccChHHHHHH
Q psy10080         43 WACPMCRKIYAFKYNLMRH   61 (101)
Q Consensus        43 ~~C~~c~~~~~~~~~l~~h   61 (101)
                      |.|..|++...+......|
T Consensus         3 ftc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHH
T ss_pred             eechhHHHHHhhccCceEE
Confidence            5566666666665555555

>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=84.43  E-value=0.049  Score=22.96  Aligned_cols=25  Identities=24%  Similarity=0.757  Sum_probs=16.8

Q ss_pred             ccccCcchhhccChHHHHHHhhhhhCCCCceecccccc
Q psy10080         42 TWACPMCRKIYAFKYNLMRHLRVECGKEPSQMCLFCSY   79 (101)
Q Consensus        42 p~~C~~c~~~~~~~~~l~~h~~~h~~~~~~~~c~~c~~   79 (101)
                      .|.|..||.++             .+...|-.|++|+.
T Consensus         8 ~W~C~~CGyi~-------------~g~~aP~~CPvC~~   32 (44)
T d1lkoa2           8 KWRCRNCGYVH-------------EGTGAPELCPACAH   32 (44)
T ss_dssp             EEEETTTCCEE-------------EEEECCSBCTTTCC
T ss_pred             EEEcCCCCcEE-------------ECCCCCCcCCCCCC
Confidence            68888888543             23245667888874

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.76  E-value=0.82  Score=23.36  Aligned_cols=27  Identities=19%  Similarity=0.457  Sum_probs=19.8

Q ss_pred             cccccCcchhhccChHHHHHHhhhhhC
Q psy10080         41 TTWACPMCRKIYAFKYNLMRHLRVECG   67 (101)
Q Consensus        41 ~p~~C~~c~~~~~~~~~l~~h~~~h~~   67 (101)
                      .+-.|-.|.+.|.....+..|++...+
T Consensus        14 ~~~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          14 QHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             ccceecccCCccCCHHHHHHHHHHhhC
Confidence            366788888888888888888765444

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.60  E-value=0.92  Score=17.58  Aligned_cols=24  Identities=29%  Similarity=0.510  Sum_probs=18.5

Q ss_pred             CceeccccccccCChHHHHHHHHH
Q psy10080         70 PSQMCLFCSYKCKHKTDIMHHMRL   93 (101)
Q Consensus        70 ~~~~c~~c~~~f~~~~~l~~h~~~   93 (101)
                      +.|.|..|.+...+...+.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            357788888888888888888753

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.21  E-value=0.99  Score=17.68  Aligned_cols=22  Identities=14%  Similarity=0.316  Sum_probs=15.1

Q ss_pred             ccccccccCChHHHHHHHHHhc
Q psy10080         74 CLFCSYKCKHKTDIMHHMRLKH   95 (101)
Q Consensus        74 c~~c~~~f~~~~~l~~h~~~h~   95 (101)
                      |..|+=.|.....++.|....-
T Consensus        11 C~~CDI~Fn~~~T~~aHKk~YC   32 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHHHTS
T ss_pred             HhhCCceehhHHHHHHHHHhcc
Confidence            6777777777777777766543