Psyllid ID: psy10158
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1266 | 2.2.26 [Sep-21-2011] | |||||||
| Q9VR59 | 1696 | Inositol hexakisphosphate | yes | N/A | 0.895 | 0.668 | 0.681 | 0.0 | |
| O43314 | 1243 | Inositol hexakisphosphate | yes | N/A | 0.833 | 0.848 | 0.574 | 0.0 | |
| Q5REW0 | 1244 | Inositol hexakisphosphate | yes | N/A | 0.833 | 0.848 | 0.572 | 0.0 | |
| Q5XHF8 | 1131 | Inositol hexakisphosphate | N/A | N/A | 0.709 | 0.793 | 0.669 | 0.0 | |
| A7Z050 | 1477 | Inositol hexakisphosphate | no | N/A | 0.804 | 0.689 | 0.574 | 0.0 | |
| Q6ZQB6 | 1129 | Inositol hexakisphosphate | yes | N/A | 0.744 | 0.834 | 0.644 | 0.0 | |
| Q6PFW1 | 1433 | Inositol hexakisphosphate | no | N/A | 0.827 | 0.730 | 0.579 | 0.0 | |
| P0C644 | 1434 | Inositol hexakisphosphate | yes | N/A | 0.691 | 0.610 | 0.662 | 0.0 | |
| A2ARP1 | 1436 | Inositol hexakisphosphate | no | N/A | 0.691 | 0.610 | 0.662 | 0.0 | |
| Q5RDF1 | 1409 | Inositol hexakisphosphate | yes | N/A | 0.672 | 0.604 | 0.644 | 0.0 |
| >sp|Q9VR59|VIP1_DROME Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Drosophila melanogaster GN=l(1)G0196 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1639 bits (4243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1234 (68%), Positives = 941/1234 (76%), Gaps = 100/1234 (8%)
Query: 1 MSYTELEHGYQGL-------------RFSKPAFYVGDEGRDKSRHECTDIGYDSD----- 42
MSYTELE GYQ + + FY+G + + TD G +D
Sbjct: 1 MSYTELESGYQDISQQHQQQNPHQSQPQQRVGFYLGLQDGNGD----TDFGDSNDGMDSD 56
Query: 43 --PCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPI 99
KQV+VG+CAMAKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP
Sbjct: 57 TSTSSSNSKQVVVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPT 116
Query: 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV 159
DCL+SFHSKGFPLEKAI+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAV
Sbjct: 117 CDCLVSFHSKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAV 176
Query: 160 LDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219
LDR+SPDP HEL+ESEDHVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR
Sbjct: 177 LDRDSPDPKHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 236
Query: 220 KIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 279
KIGSRSSVYSPESRVRK+GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER
Sbjct: 237 KIGSRSSVYSPESRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 296
Query: 280 DSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNK 339
DSEGKEIRYPVIL+++EKLISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNK
Sbjct: 297 DSEGKEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNK 356
Query: 340 YYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRT 399
YYDD AKILGNMILREL PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRT
Sbjct: 357 YYDDCAKILGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRT 416
Query: 400 PKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEI 459
PKQKMKVEVRHPKFFEIF KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EI
Sbjct: 417 PKQKMKVEVRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEI 475
Query: 460 EEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLI 519
EEK+ KLEQLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ +P EPSLVLI
Sbjct: 476 EEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVEPSLVLI 535
Query: 520 LKWGGELTPAGRIQAEELGRVFRCMYPGGQG-------NGLGLLRLHSTFRHDLKIYASD 572
LKWGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYASD
Sbjct: 536 LKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDLKIYASD 595
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ K +LH+L+
Sbjct: 596 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKGRLHELM 655
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
Q DR F+ EDR+ +NPCN+ SI A+DFVKNPV CC +H LI L HII K +D K K
Sbjct: 656 QNDREFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKKDDPKTK 715
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
++ LYHGE+W+LM RW KIEKDF K+ +DISKIPDIYDCIKYDLQHNQHT+Q+DQAE
Sbjct: 716 DAILYHGETWDLMRCRWEKIEKDFSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAE 775
Query: 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESE-ENVNRLN 811
ELY+ AK +ADIVIPQEYG+T EKL I QGIC PLL+KI+ DLQRN++E E E +NRLN
Sbjct: 776 ELYIYAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDEFMNRLN 835
Query: 812 PQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVS 871
P YSHGV+SP RHVRTRLYFTSESH+HSLLTVLRYGGL V DEQW RAM+Y+SMVS
Sbjct: 836 PHYSHGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVV--TDEQWRRAMDYISMVS 893
Query: 872 ELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKK 931
ELNYMSQ+VIMLYEDPTKDPTS+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHS D
Sbjct: 894 ELNYMSQIVIMLYEDPTKDPTSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSHGDNAC 953
Query: 932 NL----------PRIDQEDTEFYSTDAEDNTGSSKSTSDQDSP-------TSAEGPSVDQ 974
N+ RI++E+ S E+ G + TS Q S + A G + +
Sbjct: 954 NVSLQSSDESNPARIEEEND---SNSGEEREGKKRGTSGQRSTDRSAERISPAFGFNRLE 1010
Query: 975 SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEG-------------HPYRRPRSPNE 1021
+ K S+PIPI + D + P R +P+
Sbjct: 1011 LRSKQFKSKPIPIGAHHTVSGHEAMDLAKRLNEELASHQQQQNQQLRPISPDIRAVTPDC 1070
Query: 1022 EQRSRSYDQQHQRPKGASKCCEGNC--------------------RHRHSISGQMCYLKN 1061
E RSRS++ QRP E + R RHSI+GQM Y+K
Sbjct: 1071 EPRSRSFE---QRPTSGVCAKEPDSQVSVSVSASVSSANASTSSRRQRHSIAGQMSYMKM 1127
Query: 1062 STGYGFRRGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPL 1121
GF + +A +S NSLFSTAVISGSSSAPNLR+MI +++ GFG VP IRPL
Sbjct: 1128 LGFGGFSKKMA---TSANSLFSTAVISGSSSAPNLRDMITVSSS-----GFGDVPPIRPL 1179
Query: 1122 ETLHNALSLKHLDNFLGKMIRVIPSKTPASSPPK 1155
ETLHNALSL+ LD+FL MI KTP SPP+
Sbjct: 1180 ETLHNALSLRKLDSFLQDMILAQIFKTPTGSPPR 1213
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Drosophila melanogaster (taxid: 7227) EC: 2EC: .EC: 7EC: .EC: 4EC: .EC: 2EC: 4 |
| >sp|O43314|VIP2_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens GN=PPIP5K2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1191 (57%), Positives = 833/1191 (69%), Gaps = 136/1191 (11%)
Query: 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFH 107
+Q++VG+C+MAKKS+SKPMKEIL R+ F++I ++VF EE I +PV+ WP+ DCLISFH
Sbjct: 42 RQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFH 101
Query: 108 SKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDP 167
SKGFPL+KA+ YA LR PFVIN+LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P
Sbjct: 102 SKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNP 161
Query: 168 VKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 227
+ L+E EDHVEVNG VF KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSV
Sbjct: 162 KECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSV 221
Query: 228 YSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIR 287
YSPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+R
Sbjct: 222 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVR 281
Query: 288 YPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKI 347
YPVIL+ EKLI+ KVCLAFKQTVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKI
Sbjct: 282 YPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKI 341
Query: 348 LGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVE 407
LGN+++RELAP HIPWS+P + +D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+E
Sbjct: 342 LGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKME 401
Query: 408 VRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLE 467
VRH KFF++F K G G +KLKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLE
Sbjct: 402 VRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNN-DSEIEENKPKLE 460
Query: 468 QLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELT 527
QLK VLEMYGHFSGINRKVQ+ Y P G P+ SS +E+ +EPSL+L+LKWGGELT
Sbjct: 461 QLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDSRR----EEPSLLLVLKWGGELT 516
Query: 528 PAGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582
PAGR+QAEELGR FRCMYPGGQG+ G GLLRLHST+RHDLKIYASDEGRVQMTAAA
Sbjct: 517 PAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAA 576
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKH-QNIVKAKLHDLLQRDRTFTPE 641
FAKGLLALEGELTPILVQMVKSAN NGLLD+DSD+ Q VKA+LH++LQ+DR FT E
Sbjct: 577 FAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAE 636
Query: 642 DRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGES 701
D +K+ P + S+ +M +KNPV+ C +++ LI L I+ ++ED K + LYH E+
Sbjct: 637 DYEKLTPSGSISLIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSSDIQLYHSET 696
Query: 702 WELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYM 761
ELM RRWSK+EKDF KN +YDISKIPDIYDCIKYD+QHN +++ + ELY +K +
Sbjct: 697 LELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKAL 755
Query: 762 ADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSP 821
ADIVIPQEYG+T +EKL I++G C PL++KIR+DLQR + ++ VN+L+P YS GV SP
Sbjct: 756 ADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRT--QDDDTVNKLHPVYSRGVLSP 813
Query: 822 GRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVI 881
RHVRTRLYFTSESH+HSLL++LRYG L DEQW RAM+Y+++V+ELNYM+Q+VI
Sbjct: 814 ERHVRTRLYFTSESHVHSLLSILRYGALCN--ESKDEQWKRAMDYLNVVNELNYMTQIVI 871
Query: 882 MLYEDPTKDPTSDERFHIELHFSPGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQED 940
MLYEDP KD +S+ERFH+ELHFSPG C + KNLP G G+RP SR ++ + +ID +D
Sbjct: 872 MLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRPFKIDNDD 931
Query: 941 TEFYSTDAEDNTG-----------------------SSKSTSDQDSPTSAEGP------- 970
S E + +T+D++SP S P
Sbjct: 932 EPHTSKRDEVDRAVILFKPMVSEPIHIHRKSPLPRSRKTATNDEESPLSVSSPEGTGTWL 991
Query: 971 ---------SVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHPYRRPRSPNE 1021
+ G+ + S P++ K L +S+ +V+ + R PR+ E
Sbjct: 992 HYTSGVGTGRRRRRSGEQITSS--PVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVE 1049
Query: 1022 EQRSRSYDQQHQRPKGASKCCEGNCRHRHSISGQMCYLKNSTGYGFRRGLALSSSSGNSL 1081
Q Q P S C L
Sbjct: 1050 ---------QKQNPTVGSHCA-------------------------------------GL 1063
Query: 1082 FSTAVISGSSSAPNLRNM-------------IPSTTNVTALDGF---------------G 1113
FST+V+ GSSSAPNL++ I T +A+ F
Sbjct: 1064 FSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDDATRGSAVKRFSISFARHPTNGFELYS 1123
Query: 1114 GVPSIRPLETLHNALSLKHLDNFLGKMIRV---IPSKTPASSPPKYPSTPI 1161
VPSI PLETLHNALSLK +D FL + +P KT S S+PI
Sbjct: 1124 MVPSICPLETLHNALSLKQVDEFLASIASPSSDVPRKTAEISSTALRSSPI 1174
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|Q5REW0|VIP2_PONAB Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Pongo abelii GN=PPIP5K2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1254 bits (3246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1192 (57%), Positives = 832/1192 (69%), Gaps = 137/1192 (11%)
Query: 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFH 107
+Q++VG+C+MAKKS+SKPMKEIL R+ F++I ++VF EE I +PV+ WP+ DCLISFH
Sbjct: 42 RQIVVGICSMAKKSKSKPMKEILERVSLFKYITVVVFEEEVILNEPVENWPLCDCLISFH 101
Query: 108 SKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDP 167
SKGFPL+KA+ YA LR PFVIN+LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P
Sbjct: 102 SKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNP 161
Query: 168 VKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 227
+ L+E EDHVEVNG VF KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSV
Sbjct: 162 KECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSV 221
Query: 228 YSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIR 287
YSPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+R
Sbjct: 222 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVR 281
Query: 288 YPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKI 347
YPVIL+ EKLI+ KVCLAFKQTVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKI
Sbjct: 282 YPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKI 341
Query: 348 LGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVE 407
LGN+++RELAP HIPWS+P + +D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+E
Sbjct: 342 LGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKME 401
Query: 408 VRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLE 467
VRH KFF++F K G G +KLKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLE
Sbjct: 402 VRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNN-DSEIEENKPKLE 460
Query: 468 QLKGVLEMYGHF-SGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGEL 526
QLK VLEMYGHF SGINRKVQ+ Y P G P+ SS +E+ +EPSL+L+LKWGGEL
Sbjct: 461 QLKTVLEMYGHFFSGINRKVQLTYLPHGCPKTSSEEEDSRR----EEPSLLLVLKWGGEL 516
Query: 527 TPAGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
TPAGR+QAEELGR FRCMYPGGQG+ G GLLRLHST+RHDLKIYASDEGRVQMTAA
Sbjct: 517 TPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAA 576
Query: 582 AFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKH-QNIVKAKLHDLLQRDRTFTP 640
AFAKGLLALEGELTPILVQMVKSAN NGLLD+DSD+ Q VKA+LH++LQ+DR FT
Sbjct: 577 AFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTA 636
Query: 641 EDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGE 700
ED +++ P + S+ +M +KNPV+ C +++ LI L I+ ++ED K + LYH E
Sbjct: 637 EDYEELTPSGSVSLIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSSDIQLYHSE 696
Query: 701 SWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKY 760
+ ELM RRWSK+EKDF KN +YDISKIPDIYDCIKYD+QHN +++ + ELY +K
Sbjct: 697 TLELMLRRWSKLEKDFKAKNGRYDISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKA 755
Query: 761 MADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSS 820
+ADIVIPQEYG+T +EKL I++G C PL++KIR+DLQR + + VN+L+P YS GV S
Sbjct: 756 LADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRT--QDDGTVNKLHPVYSRGVLS 813
Query: 821 PGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVV 880
P RHVRTRLYFTSESH+HSLL++LRYG L DEQW RAM+Y+++V+ELNYM+Q+V
Sbjct: 814 PERHVRTRLYFTSESHVHSLLSILRYGALCN--ESKDEQWKRAMDYLNVVNELNYMTQIV 871
Query: 881 IMLYEDPTKDPTSDERFHIELHFSPGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQE 939
IMLYEDP KD +S+ERFH+ELHFSPG C + KNLP G G+RP SR ++ + +ID +
Sbjct: 872 IMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRPSKIDND 931
Query: 940 DTEFYSTDAEDNTG-----------------------SSKSTSDQDSPTSAEGP------ 970
D S E + +T+D++SP S P
Sbjct: 932 DEPHTSKRDEVDRAVILFKPMVSEPIHIHRKSPLPRSRKMATNDEESPLSVSSPEGTGTW 991
Query: 971 ----------SVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHPYRRPRSPN 1020
+ G+ + S P+ + K L +S+ +V+ + R PR+
Sbjct: 992 LHYTSGVGTGRRRRRSGEQITSSPV--SPKSLAFTSSIFGSWQQVVSENANYLRTPRTLV 1049
Query: 1021 EEQRSRSYDQQHQRPKGASKCCEGNCRHRHSISGQMCYLKNSTGYGFRRGLALSSSSGNS 1080
E Q Q P S C
Sbjct: 1050 E---------QKQNPTVGSHCA-------------------------------------G 1063
Query: 1081 LFSTAVISGSSSAPNLRNM-------------IPSTTNVTALDGFG-------------- 1113
LFST+V+ GSSSAPNL++ I T +A+ F
Sbjct: 1064 LFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDDATRGSAVKRFSISFARHPTNGFELY 1123
Query: 1114 -GVPSIRPLETLHNALSLKHLDNFLGKMIRV---IPSKTPASSPPKYPSTPI 1161
VPSI PLETLHNALSLK +D FL + +P KT S S+PI
Sbjct: 1124 SMVPSICPLETLHNALSLKQVDEFLASIASPSSDVPRKTAEISSTALHSSPI 1175
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|Q5XHF8|VIP2_XENLA Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Xenopus laevis GN=ppip5k2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1254 bits (3246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/938 (66%), Positives = 752/938 (80%), Gaps = 40/938 (4%)
Query: 18 PAFYVG----DEGRDKSRHECTD--------------IGYDSDPCCEEGKQVIVGVCAMA 59
P F+VG DE D+S+ E D YDS P +Q++VG+CAMA
Sbjct: 11 PRFFVGCEESDELLDQSKPENLDNLYEHTEDEEDEEDDEYDSPP----ERQIVVGICAMA 66
Query: 60 KKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIK 118
KKS+SKPMKEIL RL F++I +++F EE I + V+ WP+ DCLISFHSKGF L+KA+
Sbjct: 67 KKSKSKPMKEILERLSLFKYITVVIFEEEVILNETVENWPLCDCLISFHSKGFLLDKAVA 126
Query: 119 YANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178
YA LR PFVIN+LN+QY IQDRR+VY +L EGI +PRYAVL+R+ P + L+E EDH
Sbjct: 127 YAKLRNPFVINDLNLQYQIQDRREVYRILTNEGIMLPRYAVLNRDPNKPEECNLIEGEDH 186
Query: 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSG 238
VEVNG +F KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+G
Sbjct: 187 VEVNGEIFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESSVRKTG 246
Query: 239 SFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKL 298
S+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKL
Sbjct: 247 SYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKL 306
Query: 299 ISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAP 358
I+ KVCLAFKQTVCGFDLLRA+G+S+VCDVNGFSFVKNS KYYDD AKILGN+I+RELAP
Sbjct: 307 IAWKVCLAFKQTVCGFDLLRASGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIIMRELAP 366
Query: 359 TLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFY 418
HIPWS+P + +D P VPTT G MELRCV+AVIRHGDRTPKQKMK+EVRH +FF++F
Sbjct: 367 VFHIPWSIPLEAEDIPIVPTTSGTKMELRCVIAVIRHGDRTPKQKMKMEVRHQRFFDLFE 426
Query: 419 KYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGH 478
KY G G +KLKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGH
Sbjct: 427 KYHGYKTGKIKLKKPKQLQEVLDIARQLLVELGQNN-DSEIEESKAKLEQLKTVLEMYGH 485
Query: 479 FSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELG 538
FSGINRKVQ+ Y P G P+ SS EEED C+ +EPSL+L+LKWGGELTPAGR+QAEELG
Sbjct: 486 FSGINRKVQLTYLPHGCPKTSS---EEED-CRREEPSLLLVLKWGGELTPAGRVQAEELG 541
Query: 539 RVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGE 593
R FRCMYPGGQG+ G GLLRLHST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGE
Sbjct: 542 RAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGE 601
Query: 594 LTPILVQMVKSANTNGLLDNDSDASKH-QNIVKAKLHDLLQRDRTFTPEDRDKVNPCNAT 652
LTPILVQMVKSAN NGLLD+DSD+ Q+ VKA+LH++LQRDR F+ ED +K++P +
Sbjct: 602 LTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHEILQRDRDFSSEDFEKLSPTGSV 661
Query: 653 SINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKI 712
S +M F+KNPV+ C +++ LI L I++++ED K + LYH E+ ELM RRWSK+
Sbjct: 662 SQIKSMHFIKNPVKTCDKVYSLIQSLTSQIRQRMEDPKFADIQLYHSETLELMLRRWSKL 721
Query: 713 EKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGM 772
EKDF KN +YDISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+
Sbjct: 722 EKDFKTKNGRYDISKIPDIYDCIKYDVQHNC-SLKLENTMELYRLSKALADIVIPQEYGI 780
Query: 773 TMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFT 832
+ EKL I++G C PL++KIR+DLQR + ++ VN+L+P YS GV SP RHVRTRLYFT
Sbjct: 781 SRPEKLEIAKGYCTPLVRKIRSDLQRT--QDDDTVNKLHPLYSRGVMSPERHVRTRLYFT 838
Query: 833 SESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPT 892
SESH+HSLL++LR+G L + DEQW RAM+Y+++VSELNYM+Q+VIMLYEDP KD +
Sbjct: 839 SESHVHSLLSILRFGALCDET--KDEQWKRAMDYLNVVSELNYMTQIVIMLYEDPNKDVS 896
Query: 893 SDERFHIELHFSPGVNCCVQ-KNLPPGPGFRPHSRNDQ 929
S+ERFH+ELHFSPG C + KNLP G G+RP S+ ++
Sbjct: 897 SEERFHVELHFSPGAKGCEEDKNLPSGFGYRPASQENE 934
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|A7Z050|VIP1_BOVIN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Bos taurus GN=PPIP5K1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1134 (57%), Positives = 797/1134 (70%), Gaps = 115/1134 (10%)
Query: 50 QVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHS 108
Q+IVG+CAM KKS+SKPM +IL RL F+++ +I+ E+ I +PV+ WP CLISFHS
Sbjct: 54 QIIVGICAMTKKSKSKPMTQILERLCRFDYLTVIILGEDVILNEPVENWPSCHCLISFHS 113
Query: 109 KGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPV 168
KGFPL+KA+ Y+ LR PF+IN+L MQY IQDRR+VY +L++EGI++PRYAVL+R+ P
Sbjct: 114 KGFPLDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPARPE 173
Query: 169 KHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVY 228
+ L+E ED VEVNG VF KPFVEKPVSAEDHN+YIYYP+SAGGGSQRLFRKIGSRSSVY
Sbjct: 174 ECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVY 233
Query: 229 SPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 288
SPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY
Sbjct: 234 SPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 293
Query: 289 PVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKIL 348
PV+L+ EKL++RKVC+AFKQTVCGFDLLRANG SFVCDVNGFSFVKNS KYYDD AKIL
Sbjct: 294 PVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKIL 353
Query: 349 GNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEV 408
GN I+RELAP IPWS+P + +D P VPTT G MMELRCV+A+IRHGDRTPKQKMK+EV
Sbjct: 354 GNTIMRELAPQFQIPWSIPMEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEV 413
Query: 409 RHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQ 468
HP+FF +F K+GG G +KLK+P+QLQEVLDI R+LL E+E EIEEK GKLEQ
Sbjct: 414 THPRFFSLFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGG-EIEEKTGKLEQ 472
Query: 469 LKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTP 528
LK VLEMYGHFSGINRKVQ+ Y P G +S+E ++ + PSL+L+LKWGGELTP
Sbjct: 473 LKSVLEMYGHFSGINRKVQLTYYPHGV---KASNEGQDTQREALAPSLLLVLKWGGELTP 529
Query: 529 AGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
AGR+QAEELGR FRCMYPGGQG+ G GLLRLHSTFRHDLKIYASDEGRVQMTAAAF
Sbjct: 530 AGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 589
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPED 642
AKGLLALEGELTPILVQMVKSAN NGLLD+D D+ S Q+ VKA+LH +LQ+D F PED
Sbjct: 590 AKGLLALEGELTPILVQMVKSANMNGLLDSDGDSLSSCQHRVKARLHHILQQDAPFGPED 649
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
+++ P +TS+ +M ++NPV+ C ++ +LI L H I+++++D K + LYH E+
Sbjct: 650 YNQLAPTGSTSLLSSMAVIQNPVKVCDQVFDLIENLTHQIRERMQDPKSVDLQLYHSETL 709
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMA 762
ELM +RWSK+E+DF K+ +YDISKIPDIYDC+KYD+QHN ++ EL +K +A
Sbjct: 710 ELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHN-GSLGLQGTAELLRLSKALA 768
Query: 763 DIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPG 822
D+VIPQEYG++ EKL I+ G C+PLL+KI DLQR E +E+VN+L+P YS GV SPG
Sbjct: 769 DVVIPQEYGISREEKLEIAVGFCLPLLRKILLDLQRTHE--DESVNKLHPLYSRGVLSPG 826
Query: 823 RHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIM 882
RHVRTRLYFTSESH+HSLL+V RYGGL + D QW RA+ Y+S +SELNYM+Q+VIM
Sbjct: 827 RHVRTRLYFTSESHVHSLLSVFRYGGLLDET--KDTQWQRALAYLSAISELNYMTQIVIM 884
Query: 883 LYEDPTKDPTSDERFHIELHFSPGVNCCVQK-NLPPGPGFRPHSRNDQKKNLPRIDQEDT 941
LYED T+DP S+ERFH+ELHFSPGV ++ + P G GFRP S ++++ + DQ
Sbjct: 885 LYEDNTRDPLSEERFHVELHFSPGVKGVEEEGSAPTGCGFRPASSENEER---KADQGSV 941
Query: 942 E-FYSTDAEDNTGSSKSTSDQDSPTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNSVGD 1000
E A D + T SP +EGP
Sbjct: 942 EDLCPGKASDEPDRALQT----SPLPSEGP------------------------------ 967
Query: 1001 PCPSIVAPEGHPYRRPRSPNEEQRSRSY--DQQHQRPKGASKCCEGNCRHRHSISGQMCY 1058
G P R P N + S + RP G HR S +
Sbjct: 968 ---------GLPKRSPLIRNRKAGSMEVLSETSSSRPGG----------HRLFSSSRPPT 1008
Query: 1059 LKNSTGYGFRRGLALSSSSGNSLFSTAVISGSSSAPNLRN-------------------- 1098
+G G S LFST V+ GSSSAPNL++
Sbjct: 1009 EMKQSGLG---------SQCTGLFSTTVLGGSSSAPNLQDYARSQGKKLPPASLKHRDEL 1059
Query: 1099 -MIPSTTNVTA------LDGFGG---VPSIRPLETLHNALSLKHLDNFLGKMIR 1142
+P+ + +GF G VP+I PLETLHNALSL+ + FL ++ +
Sbjct: 1060 LFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLSRVCQ 1113
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Activated when cells are exposed to hyperosmotic stress. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|Q6ZQB6|VIP2_MOUSE Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Mus musculus GN=Ppip5k2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1238 bits (3204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/988 (64%), Positives = 773/988 (78%), Gaps = 46/988 (4%)
Query: 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFH 107
+Q++VG+C+MAKKS+SKPMKEIL R+ F++I ++VF EE I +PV+ WP+ DCLISFH
Sbjct: 48 RQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEIILNEPVENWPLCDCLISFH 107
Query: 108 SKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDP 167
SKGFPL+KA+ YA LR PFVIN+LNMQY IQDRR VY++L+ EGI +PRYA+L+R+ +P
Sbjct: 108 SKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAILNRDPNNP 167
Query: 168 VKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 227
+ L+E EDHVEVNG VF KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSV
Sbjct: 168 KECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSV 227
Query: 228 YSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIR 287
YSPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+R
Sbjct: 228 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVR 287
Query: 288 YPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKI 347
YPVIL+ EKLI+ KVCLAFKQTVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKI
Sbjct: 288 YPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKI 347
Query: 348 LGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVE 407
LGN+++RELAP HIPWS+P + +D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+E
Sbjct: 348 LGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKME 407
Query: 408 VRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLE 467
VRH KFF++F K G G +KLKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLE
Sbjct: 408 VRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNN-DSEIEENKSKLE 466
Query: 468 QLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELT 527
QLK VLEMYGHFSGINRKVQ+ Y P G P+ SS EEED + +EPSL+L+LKWGGELT
Sbjct: 467 QLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSS---EEED-NRREEPSLLLVLKWGGELT 522
Query: 528 PAGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582
PAGR+QAEELGR FRCMYPGGQG+ G GLLRLHST+RHDLKIYASDEGRVQMTAAA
Sbjct: 523 PAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAA 582
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKH-QNIVKAKLHDLLQRDRTFTPE 641
FAKGLLALEGELTPILVQMVKSAN NGLLD+DSD+ Q VKA+LH++LQ+DR FT E
Sbjct: 583 FAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAE 642
Query: 642 DRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGES 701
D +K+ P + S+ +M +KNPV+ C +++ LI L I+ ++ED K + LYH E+
Sbjct: 643 DYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRYRMEDPKSADIQLYHSET 702
Query: 702 WELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYM 761
ELM RRWSK+EKDF KN +YDISKIPDIYDCIKYD+QHN +++ + ELY +K +
Sbjct: 703 LELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKAL 761
Query: 762 ADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSP 821
ADIVIPQEYG+T +EKL I++G C PL++KIR+DLQR + ++ VN+L+P YS GV SP
Sbjct: 762 ADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRT--QDDDTVNKLHPVYSRGVLSP 819
Query: 822 GRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVI 881
RHVRTRLYFTSESH+HSLL++LRYG L + DEQW RAM+Y+++V+ELNYM+Q+VI
Sbjct: 820 ERHVRTRLYFTSESHVHSLLSILRYGALCDD--SKDEQWKRAMDYLNVVNELNYMTQIVI 877
Query: 882 MLYEDPTKDPTSDERFHIELHFSPGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQED 940
MLYEDP KD +S+ERFH+ELHFSPG C + KNLP G G+RP SR
Sbjct: 878 MLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASR-------------- 923
Query: 941 TEFYSTDAEDNTGSSKSTSDQDSPTSAEGPSVDQSKGKF--VLSQPIPITVKD-LKRKNS 997
+N G +D D P +++ VD++ F ++S+PI I K L R
Sbjct: 924 ---------ENEGRRSLKTDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRK 974
Query: 998 VGDPCPSIVAPEGHPYRRPRSPNEEQRS 1025
+ +V+ + R PR+ E++++
Sbjct: 975 IT--ANEVVSENANYLRTPRNLVEQKQN 1000
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|Q6PFW1|VIP1_HUMAN Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Homo sapiens GN=PPIP5K1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1228 bits (3177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/1110 (57%), Positives = 795/1110 (71%), Gaps = 63/1110 (5%)
Query: 50 QVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHS 108
Q+IVG+CAM KKS+SKPM +IL RL F+++ +++ E+ I +PV+ WP CLISFHS
Sbjct: 54 QIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPSCHCLISFHS 113
Query: 109 KGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPV 168
KGFPL+KA+ Y+ LR PF+IN+L MQY IQDRR+VY +L++EGI++PRYAVL+R+ P
Sbjct: 114 KGFPLDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPARPE 173
Query: 169 KHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVY 228
+ L+E ED VEVNG VF KPFVEKPVSAEDHN+YIYYP+SAGGGSQRLFRKIGSRSSVY
Sbjct: 174 ECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVY 233
Query: 229 SPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 288
SPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY
Sbjct: 234 SPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 293
Query: 289 PVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKIL 348
PV+L+ EKL++RKVC+AFKQTVCGFDLLRANG SFVCDVNGFSFVKNS KYYDD AKIL
Sbjct: 294 PVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKIL 353
Query: 349 GNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEV 408
GN I+RELAP IPWS+P + +D P VPTT G MMELRCV+A+IRHGDRTPKQKMK+EV
Sbjct: 354 GNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEV 413
Query: 409 RHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQ 468
+HP+FF +F K+GG G +KLK+P+QLQEVLDI R+LL E+E EIEEK GKLEQ
Sbjct: 414 KHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGG-EIEEKTGKLEQ 472
Query: 469 LKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTP 528
LK VLEMYGHFSGINRKVQ+ Y P G +S+E ++ + PSL+L+LKWGGELTP
Sbjct: 473 LKSVLEMYGHFSGINRKVQLTYYPHGV---KASNEGQDPQRETLAPSLLLVLKWGGELTP 529
Query: 529 AGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
AGR+QAEELGR FRCMYPGGQG+ G GLLRLHSTFRHDLKIYASDEGRVQMTAAAF
Sbjct: 530 AGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 589
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPED 642
AKGLLALEGELTPILVQMVKSAN NGLLD+D D+ S Q+ VKA+LH +LQ+D F PED
Sbjct: 590 AKGLLALEGELTPILVQMVKSANMNGLLDSDGDSLSSCQHRVKARLHHILQQDAPFGPED 649
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
D++ P +TS+ +M ++NPV+ C ++ LI L H I+++++D + + LYH E+
Sbjct: 650 YDQLAPTRSTSLLNSMTIIQNPVKVCDQVFALIENLTHQIRERMQDPRSVDLQLYHSETL 709
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMA 762
ELM +RWSK+E+DF K+ +YDISKIPDIYDC+KYD+QHN ++ EL +K +A
Sbjct: 710 ELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHN-GSLGLQGTAELLRLSKALA 768
Query: 763 DIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNP----QYSHGV 818
D+VIPQEYG++ EKL I+ G C+PLL+KI DLQR E +E+VN+L+P +YS GV
Sbjct: 769 DVVIPQEYGISREEKLEIAVGFCLPLLRKILLDLQRTHE--DESVNKLHPLCYLRYSRGV 826
Query: 819 SSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQ 878
SPGRHVRTRLYFTSESH+HSLL+V RYGGL + D QW RA++Y+S +SELNYM+Q
Sbjct: 827 LSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETQ--DAQWQRALDYLSAISELNYMTQ 884
Query: 879 VVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQK-NLPPGPGFRPHSRNDQKKNLPRID 937
+VIMLYED T+DP S+ERFH+ELHFSPGV ++ + P G GFRP S +++ +
Sbjct: 885 IVIMLYEDNTQDPLSEERFHVELHFSPGVKGVEEEGSAPAGCGFRPASSENEEMKTNQGS 944
Query: 938 QEDTEFYSTDAEDNTGSSKSTSDQDSPTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNS 997
E+ A D + T SP EGP + + P+ +++ K +
Sbjct: 945 MEN--LCPGKASDEPDRALQT----SPQPPEGPGLPRRS-------PL---IRNRKAGSM 988
Query: 998 VGDPCPSIVAPEGHP-YRRPRSPNEEQRSRSYDQQHQRPKGASKCCEGNCRHRHSISGQM 1056
S P G+ + R P E ++S G C G ++ G
Sbjct: 989 EVLSETSSSRPGGYRLFSSSRPPTEMKQS-----------GLGSQCTG--LFSTTVLGGS 1035
Query: 1057 CYLKNSTGYGFRRGLALSSSS----GNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGF 1112
N Y G L +S LF AV S S TN +G
Sbjct: 1036 SSAPNLQDYARSHGKKLPPASLKHRDELLFVPAVKRFSVS------FAKHPTN--GFEGC 1087
Query: 1113 GGVPSIRPLETLHNALSLKHLDNFLGKMIR 1142
VP+I PLETLHNALSL+ + FL ++ +
Sbjct: 1088 SMVPTIYPLETLHNALSLRQVSEFLSRVCQ 1117
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Activated when cells are exposed to hyperosmotic stress. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|P0C644|VIP1_RAT Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Rattus norvegicus GN=Ppip5k1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1206 bits (3121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/893 (66%), Positives = 715/893 (80%), Gaps = 17/893 (1%)
Query: 50 QVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHS 108
Q+IVG+CAM KKS+SKPM +IL RL F+++ +++ E+ I +PV+ WP CLISFHS
Sbjct: 56 QIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHS 115
Query: 109 KGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPV 168
KGFPL+KA+ Y+ LR PF+IN+L MQY IQDRR+VY +L++EGI++PRYAVL+R+ P
Sbjct: 116 KGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPE 175
Query: 169 KHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVY 228
+ L+E ED VEVNG VF KPFVEKPVSAEDHN+YIYYP+SAGGGSQRLFRKIGSRSSVY
Sbjct: 176 ECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVY 235
Query: 229 SPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 288
SPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RY
Sbjct: 236 SPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRY 295
Query: 289 PVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKIL 348
PV+L+ EKL++RKVC+AFKQTVCGFDLLRANG SFVCDVNGFSFVKNS KYYDD AKIL
Sbjct: 296 PVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKIL 355
Query: 349 GNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEV 408
GN I+RELAP IPWS+P + +D P VPTT G MMELRCV+A+IRHGDRTPKQKMK+EV
Sbjct: 356 GNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEV 415
Query: 409 RHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQ 468
HP+FF +F K+GG G +KLK+P+QLQEVLDI R+LL E+E EIEEK GKLEQ
Sbjct: 416 THPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPG-AEIEEKTGKLEQ 474
Query: 469 LKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTP 528
LK VLEMYGHFSGINRKVQ+ Y P G +S E ++ +P PSL+L+LKWGGELTP
Sbjct: 475 LKSVLEMYGHFSGINRKVQLTYYPHGV---KASSEGQDLQREPPAPSLLLVLKWGGELTP 531
Query: 529 AGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
GR+QAEELGR FRCMYPGGQG+ G GLLRLHSTFRHDLKIYASDEGRVQMTAAAF
Sbjct: 532 DGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 591
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKH-QNIVKAKLHDLLQRDRTFTPED 642
AKGLLALEGELTPILVQMVKSAN NGLLD+DSD+ Q+ VKA+LH +LQ+D F PED
Sbjct: 592 AKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPED 651
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
D++ P +TS+ +M ++NPV+ C ++ LI L H I+++++D + LYH E+
Sbjct: 652 YDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETL 711
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMA 762
ELM +RWSK+E+DF K+ +YDISKIPDIYDC+KYD+QHN ++ EL +K +A
Sbjct: 712 ELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHN-GSLGLQGTAELLRLSKALA 770
Query: 763 DIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPG 822
D+VIPQEYG++ EK+ I+ G C+PLL+KI DLQR E +E+VN+L+P YS GV SPG
Sbjct: 771 DVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHE--DESVNKLHPLYSRGVLSPG 828
Query: 823 RHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIM 882
RHVRTRLYFTSESH+HSLL+V RYGGL + D QW RA+ Y+S +SELNYM+Q+VIM
Sbjct: 829 RHVRTRLYFTSESHVHSLLSVFRYGGLLDET--KDAQWQRALAYLSAISELNYMTQIVIM 886
Query: 883 LYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRP-HSRNDQKKNLP 934
LYED T+DP S+ERFH+ELHFSPGV + + P G GFRP S N++ K P
Sbjct: 887 LYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDP 939
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Activated when cells are exposed to hyperosmotic stress. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|A2ARP1|VIP1_MOUSE Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Mus musculus GN=Ppip5k1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/893 (66%), Positives = 716/893 (80%), Gaps = 17/893 (1%)
Query: 50 QVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHS 108
Q+IVG+CAM KKS+SKPM +IL RL F+++ +++ E+ I +PV+ WP CLISFHS
Sbjct: 54 QIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPSCHCLISFHS 113
Query: 109 KGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPV 168
KGFPL+KA+ Y+ LR PF+IN+L MQY IQDRR+VY +L++EGI++PRYAVL+R+ P
Sbjct: 114 KGFPLDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPE 173
Query: 169 KHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVY 228
+ L+E ED VEVNG VF KPFVEKPVSAEDHN+YIYYP+SAGGGSQRLFRKIGSRSSVY
Sbjct: 174 ECSLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVY 233
Query: 229 SPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 288
SPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RY
Sbjct: 234 SPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRY 293
Query: 289 PVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKIL 348
PV+L+ EKL++RKVC+AFKQTVCGFDLLRANG SFVCDVNGFSFVKNS KYYDD AKIL
Sbjct: 294 PVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKIL 353
Query: 349 GNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEV 408
GN I+RELAP IPWS+P + +D P VPTT G MMELRCV+A+IRHGDRTPKQKMK+EV
Sbjct: 354 GNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEV 413
Query: 409 RHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQ 468
HP+FF +F K+GG G +KLK+P+QLQEVLDI R+LL E+E EIEEK GKLEQ
Sbjct: 414 THPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPEA-EIEEKTGKLEQ 472
Query: 469 LKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTP 528
LK VLEMYGHFSGINRKVQ+ Y P G +S+E ++ +P PSL+L+LKWGGELTP
Sbjct: 473 LKSVLEMYGHFSGINRKVQLTYYPHGV---KASNEGQDLQREPLAPSLLLVLKWGGELTP 529
Query: 529 AGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
GR+QAEELGR FRCMYPGGQG+ G GLLRLHSTFRHDLKIYASDEGRVQMTAAAF
Sbjct: 530 DGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 589
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKH-QNIVKAKLHDLLQRDRTFTPED 642
AKGLLALEGELTPILVQMVKSAN NGLLD+DSD+ Q+ VKA+LH +LQ+D F PED
Sbjct: 590 AKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPED 649
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
D++ P +TS+ +M ++NPV+ C ++ LI L H I+++++D + LYH E+
Sbjct: 650 YDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETL 709
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMA 762
ELM +RWSK+E+DF K+ +YDISKIPDIYDC+KYD+QHN ++ EL +K +A
Sbjct: 710 ELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNG-SLGLQGTAELLRLSKALA 768
Query: 763 DIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPG 822
D+VIPQEYG++ EK+ I+ G C+PLL+KI DLQR E +E+VN+L+P YS GV SPG
Sbjct: 769 DVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHE--DESVNKLHPLYSRGVLSPG 826
Query: 823 RHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIM 882
RHVRTRLYFTSESH+HSLL+V RYGGL + D QW RA+ Y+S +SELNYM+Q+VIM
Sbjct: 827 RHVRTRLYFTSESHVHSLLSVFRYGGLLDET--QDAQWQRALAYLSAISELNYMTQIVIM 884
Query: 883 LYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRP-HSRNDQKKNLP 934
LYED T+DP S+ERFH+ELHFSPGV + + P G GFRP S N++ K P
Sbjct: 885 LYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDP 937
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Activated when cells are exposed to hyperosmotic stress. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
| >sp|Q5RDF1|VIP1_PONAB Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Pongo abelii GN=PPIP5K1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1169 bits (3025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/889 (64%), Positives = 699/889 (78%), Gaps = 37/889 (4%)
Query: 50 QVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHS 108
Q+IVG+CAM KKS+SKPM +IL RL F+++ +I+ E+ I +PV+ WP CLISFHS
Sbjct: 54 QIIVGICAMTKKSKSKPMTQILERLCRFDYLTVIILGEDVILNEPVENWPSCHCLISFHS 113
Query: 109 KGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPV 168
KGFPL+KA+ Y+ LR PF+IN+L MQY IQDRR+VY +L++EGI++PRYAVL+R+ P
Sbjct: 114 KGFPLDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPARPE 173
Query: 169 KHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVY 228
+ L+E ED VEVNG VF KPFVEKPVSAEDHN+YIYYP+SAGGGSQRLFRKIGSRSSVY
Sbjct: 174 ECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVY 233
Query: 229 SPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRY 288
SPES VRK+GS+IYE+FMPTDGTDVKVY VGPDYAHAEARKSPALDGKVERDSEGKEIRY
Sbjct: 234 SPESIVRKTGSYIYEEFMPTDGTDVKVYAVGPDYAHAEARKSPALDGKVERDSEGKEIRY 293
Query: 289 PVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKIL 348
PV+L+ EKL++RKVC+AF+QTVCGFDLLRANG SFVCDVNGFSFVKNS KYYDD AKIL
Sbjct: 294 PVMLTAMEKLVARKVCVAFRQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKIL 353
Query: 349 GNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEV 408
GN I+RELAP IPWS+P + +D P VPTT G MMELRCV+A+IRHGDRTPKQKMK+EV
Sbjct: 354 GNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEV 413
Query: 409 RHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQ 468
+HP+FF +F K+GG G +KLK+P+QLQEVLDI R+LL E+E EIEEK GKLEQ
Sbjct: 414 KHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGG-EIEEKTGKLEQ 472
Query: 469 LKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTP 528
LK VLEMYGHFSGINRKVQ Y P G +S+E ++ + PSL+L+LKWGGELTP
Sbjct: 473 LKSVLEMYGHFSGINRKVQSTYYPHGV---KASNEGQDPQRETLAPSLLLVLKWGGELTP 529
Query: 529 AGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
AGR+QAEELGR FRCMYPGGQG+ G GLLRLHSTFRHDLKIYASDEGRVQMTAAAF
Sbjct: 530 AGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 589
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPED 642
AKGLLALEGELTPILVQMVKSAN NGLLD+D D+ S Q+ VKA+LH +LQ+D F PED
Sbjct: 590 AKGLLALEGELTPILVQMVKSANMNGLLDSDGDSLSSCQHRVKARLHHILQQDAPFGPED 649
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
D++ P +TS+ +M ++NPV+ C ++ LI L H I+++++D + + LYH E+
Sbjct: 650 YDELAPTRSTSLLNSMTVIQNPVKVCDQVFALIENLTHQIRERMQDPRSVDLQLYHSETL 709
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMA 762
ELM +RWSK+E+DF K+ +YDISKIPDIYDC+KYD+QHN ++ A EL +K +A
Sbjct: 710 ELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHN-GSLGLQGAAELLRLSKALA 768
Query: 763 DIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPG 822
D+VIPQEYG++ EKL I+ G C+PLL+KI DLQR E +E+VN+L+P
Sbjct: 769 DVVIPQEYGISREEKLEIAVGFCLPLLRKILLDLQRTHE--DESVNKLHPL--------- 817
Query: 823 RHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIM 882
ESH+HSLL+V RYGGL + D QW RA++Y+S +SELNYM+Q+VIM
Sbjct: 818 -----------ESHVHSLLSVFRYGGLLDETQ--DAQWQRALDYLSAISELNYMTQIVIM 864
Query: 883 LYEDPTKDPTSDERFHIELHFSPGVNCCVQK-NLPPGPGFRPHSRNDQK 930
LYED T+DP S+ERFH+ELHFSPGV ++ + P G GFRP S +++
Sbjct: 865 LYEDNTQDPLSEERFHVELHFSPGVKGVEEEGSAPAGCGFRPASSENEE 913
|
Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer. Activated when cells are exposed to hyperosmotic stress. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 2 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1266 | ||||||
| 189239707 | 1679 | PREDICTED: similar to conserved hypothet | 0.920 | 0.693 | 0.721 | 0.0 | |
| 170053570 | 1222 | conserved hypothetical protein [Culex qu | 0.865 | 0.896 | 0.735 | 0.0 | |
| 221500714 | 1696 | lethal (1) G0196, isoform I [Drosophila | 0.895 | 0.668 | 0.681 | 0.0 | |
| 221500704 | 1300 | lethal (1) G0196, isoform G [Drosophila | 0.895 | 0.872 | 0.681 | 0.0 | |
| 307174137 | 1896 | Inositol hexakisphosphate and diphosphoi | 0.817 | 0.545 | 0.735 | 0.0 | |
| 51092222 | 1300 | GH02989p [Drosophila melanogaster] | 0.898 | 0.874 | 0.679 | 0.0 | |
| 380012012 | 1731 | PREDICTED: LOW QUALITY PROTEIN: inositol | 0.812 | 0.594 | 0.729 | 0.0 | |
| 221500709 | 1416 | lethal (1) G0196, isoform H [Drosophila | 0.860 | 0.769 | 0.704 | 0.0 | |
| 198470296 | 2125 | GA13115 [Drosophila pseudoobscura pseudo | 0.859 | 0.512 | 0.686 | 0.0 | |
| 350424817 | 2215 | PREDICTED: inositol hexakisphosphate and | 0.812 | 0.464 | 0.727 | 0.0 |
| >gi|189239707|ref|XP_975055.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 1741 bits (4509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/1226 (72%), Positives = 979/1226 (79%), Gaps = 61/1226 (4%)
Query: 1 MSYTELEHGYQGLR-FSKPA-FYVGDEGRDKSRHECTDIGYDSDPCCEEGKQVIVGVCAM 58
MSYTELEHGYQGLR ++P FYVG D + +D + GK VIVGVCAM
Sbjct: 1 MSYTELEHGYQGLRKAARPTQFYVG--SGDLELCDPSDPSLSPQELDDGGKVVIVGVCAM 58
Query: 59 AKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAI 117
AKKSQSKPMKEILTRL+EFE+IK+ VF EE I QKPV+EWP+ DCLISFHSKGFPLEKAI
Sbjct: 59 AKKSQSKPMKEILTRLQEFEYIKVTVFPEEIILQKPVEEWPVCDCLISFHSKGFPLEKAI 118
Query: 118 KYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177
+YA L P+VINNL+MQYDIQDRRKVYA+L+ EGIEIPRYAVLDR+S DP HELVESED
Sbjct: 119 QYAQLHNPYVINNLHMQYDIQDRRKVYAILQNEGIEIPRYAVLDRDSSDPKHHELVESED 178
Query: 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKS 237
HVEVNG+VFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRK+
Sbjct: 179 HVEVNGVVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKT 238
Query: 238 GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK 297
GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERD EGKEIRYPVILSNAEK
Sbjct: 239 GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDREGKEIRYPVILSNAEK 298
Query: 298 LISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELA 357
LISRKVCLAFKQ VCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDD AKILGNMILRELA
Sbjct: 299 LISRKVCLAFKQAVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDCAKILGNMILRELA 358
Query: 358 PTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIF 417
PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIF
Sbjct: 359 PTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIF 418
Query: 418 YKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYG 477
KY G GHVKLK+PKQLQE+LD AR LL EI+ + ADPEIEEKQGKLEQLKGVLEMYG
Sbjct: 419 EKYDGYKHGHVKLKRPKQLQEILDTARSLLAEIQQHEADPEIEEKQGKLEQLKGVLEMYG 478
Query: 478 HFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEEL 537
HFSGINRKVQMKYQPKGRPRGSSSD+ V KP EPSLVLILKWGGELTPAGRIQAEEL
Sbjct: 479 HFSGINRKVQMKYQPKGRPRGSSSDDGNFSVDKPAEPSLVLILKWGGELTPAGRIQAEEL 538
Query: 538 GRVFRCMYPGGQG----------NGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587
GR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL
Sbjct: 539 GRIFRCMYPGGQGRHLAGEYAGAQGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 598
Query: 588 LALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDRDKVN 647
LALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ KA+LH+L+Q DR FTPEDR+K+N
Sbjct: 599 LALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNMCKARLHELMQLDRDFTPEDREKIN 658
Query: 648 PCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGR 707
PCN++SI A+DFVKNPV+CCK +HELI L I+Q K ED K K++ LYHGE+WELMGR
Sbjct: 659 PCNSSSIADALDFVKNPVKCCKHVHELIKSLMEIVQVKKEDAKTKDAILYHGETWELMGR 718
Query: 708 RWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIP 767
RW KIEKDF KN +DISKIPDIYDCIKYDLQHN H++QF+ AEELY AKY+ADIVIP
Sbjct: 719 RWGKIEKDFYTKNKIFDISKIPDIYDCIKYDLQHNAHSLQFEHAEELYTYAKYLADIVIP 778
Query: 768 QEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEE-SEENVNRLNPQYSHGVSSPGRHVR 826
QEYG+T EKLTI QGIC PLLKKIRADLQRN+EE EE VNRLNP+YSHGVSSPGRHVR
Sbjct: 779 QEYGLTAQEKLTIGQGICTPLLKKIRADLQRNIEELGEETVNRLNPRYSHGVSSPGRHVR 838
Query: 827 TRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYED 886
TRLYFTSESH+HSL+TVLR+GGL + DEQW RAMEYVSMVSELNYMSQVV+MLYED
Sbjct: 839 TRLYFTSESHVHSLITVLRHGGLLDI--KRDEQWRRAMEYVSMVSELNYMSQVVVMLYED 896
Query: 887 PTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYST 946
PTKDP S+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHSRN+ + + DT +T
Sbjct: 897 PTKDPCSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSRNESAAS--KNASSDTSATAT 954
Query: 947 DAEDNTGSSKSTSDQ-------------DSPTSAE-GPSVDQSKGKFVL----SQPIPI- 987
+D+ G + ++ ++P++ E P K + S PIPI
Sbjct: 955 -PDDSKGQCSARIEEEEERIEEEKPEIVETPSATELSPETSPDKTYYRQYGKSSDPIPIG 1013
Query: 988 ---TVKDLKRKNSVGDPCPSIVAPEGHPY--RRPRSPNEEQRSRSYDQQHQRPKGASKCC 1042
TV + + + Y R SP E RS+SYD H+ P+ +C
Sbjct: 1014 SSHTVSGHEAMHLAQRLNEELAQQSSRSYGMNRAISPEPEARSKSYD--HKSPQKGKECN 1071
Query: 1043 EGNC-RHRHSISGQMCYLKNSTGYGFRRGLA---LSSSSGNSLFSTAVISGSSSAPNLRN 1098
RHRHSI+GQM Y K G+G L L++ SGNSLFSTAVISGS+SAPNLR+
Sbjct: 1072 NATVRRHRHSIAGQMSYYK-MLGFGCGGPLGFKKLATGSGNSLFSTAVISGSNSAPNLRD 1130
Query: 1099 MIPSTTNVTALDGFGGVPSIRPLETLHNALSLKHLDNFLGKMIRVIPSKTPASSPPKYPS 1158
MIPST + + G GGVP IRPLETLHNALSLK +D FL M +TP+S+PPKYPS
Sbjct: 1131 MIPSTASAS---GIGGVPPIRPLETLHNALSLKQIDTFLEHMTAAPLFRTPSSTPPKYPS 1187
Query: 1159 TPIEHSLSGARLGWSGPPSFVSESGP 1184
TP+ +G GP + + + P
Sbjct: 1188 TPLPTPTNG------GPTAVANSAQP 1207
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170053570|ref|XP_001862736.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167874045|gb|EDS37428.1| conserved hypothetical protein [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 1696 bits (4392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1167 (73%), Positives = 952/1167 (81%), Gaps = 71/1167 (6%)
Query: 38 GYDSDPCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQK-PVDE 96
G DSD GKQV+V VCAMAKKSQSKPMKEILTRL+EFEFIKM+VFSEE I K PV++
Sbjct: 45 GLDSDDSSTSGKQVVVAVCAMAKKSQSKPMKEILTRLQEFEFIKMVVFSEEVILKEPVEK 104
Query: 97 WPIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPR 156
WP+ DCLISFHSKGFPLEKAI+YA LR+P+VINNL+MQ+DIQDRR+VYA+LEKEGIEIPR
Sbjct: 105 WPLCDCLISFHSKGFPLEKAIQYAQLRQPYVINNLHMQFDIQDRRRVYAILEKEGIEIPR 164
Query: 157 YAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQR 216
YAVLDR+SPDP +HELVESEDHVEVNGI+FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQR
Sbjct: 165 YAVLDRDSPDPKQHELVESEDHVEVNGIIFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQR 224
Query: 217 LFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGK 276
LFRKIGSRSSVYSPESRVRK+GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGK
Sbjct: 225 LFRKIGSRSSVYSPESRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGK 284
Query: 277 VERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKN 336
VERDS+GKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKN
Sbjct: 285 VERDSDGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKN 344
Query: 337 SNKYYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHG 396
SNKYYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPP VPTTFGKMMELRCV A+IRHG
Sbjct: 345 SNKYYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVTAIIRHG 404
Query: 397 DRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSAD 456
DRTPKQKMKVEVRHPKFFEIF KY G GH+KLK+PKQLQE+LDIAR LL EI+ +AD
Sbjct: 405 DRTPKQKMKVEVRHPKFFEIFEKYDGYKYGHIKLKRPKQLQEILDIARSLLAEIQTKAAD 464
Query: 457 PEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDE-EEEDVCKPKEPS 515
EIEEKQ KLEQLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ + + PKEPS
Sbjct: 465 SEIEEKQSKLEQLKSVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDGKHRSIDAPKEPS 524
Query: 516 LVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLG----------LLRLHSTFRHD 565
LVLILKWGGELTPAGRIQAEELGR+FRCMYPGGQ G G LLRLHSTFRHD
Sbjct: 525 LVLILKWGGELTPAGRIQAEELGRIFRCMYPGGQSRGDGKEGLGAQGLGLLRLHSTFRHD 584
Query: 566 LKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVK 625
LKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ K
Sbjct: 585 LKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNMAK 644
Query: 626 AKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKK 685
++LH+L+Q DR FT EDR +NP NA SIN+AMDFVKNPV+CC +H LI L ++ K
Sbjct: 645 SRLHELMQIDRDFTVEDRAAINPGNAISINLAMDFVKNPVKCCAHVHSLIQSLLTVVGVK 704
Query: 686 LEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHT 745
+D K +++ LYHGE+WELMGRRW KIEKDFC KN +DISKIPDIYDCIKYDLQHNQHT
Sbjct: 705 RDDPKTRDAVLYHGETWELMGRRWGKIEKDFCTKNKNFDISKIPDIYDCIKYDLQHNQHT 764
Query: 746 VQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEE-SE 804
+QFD AEELY+ AKY+AD+VIPQEYG+T+ EKLTI QGIC PLLKKIRADLQRN+EE +
Sbjct: 765 LQFDLAEELYIYAKYLADVVIPQEYGLTVHEKLTIGQGICTPLLKKIRADLQRNIEELGD 824
Query: 805 ENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAM 864
E+VNRLNP+YSHGVSSPGRHVRTRLYFTSESH+HSLLTVLRYGGL + DEQW RAM
Sbjct: 825 ESVNRLNPRYSHGVSSPGRHVRTRLYFTSESHVHSLLTVLRYGGLLNV--LTDEQWRRAM 882
Query: 865 EYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPH 924
EYVSMVSELNYMSQ+VIMLYEDPTKDP S+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPH
Sbjct: 883 EYVSMVSELNYMSQIVIMLYEDPTKDPFSEERFHVELHFSPGVNCCVQKNLPPGPGFRPH 942
Query: 925 SRNDQ---------KKNLPRIDQE-DTEFYSTDAEDNTGSSKSTSDQDSPTSAEGPSVDQ 974
SRND +++ RID+E DTE ++N+ S T +DS S + D+
Sbjct: 943 SRNDSVTSKNASGDEESTSRIDEENDTE------DENSHGSGQTLPRDS-FSDTIKNKDR 995
Query: 975 SKGKFVLSQPIPI----TVKDLKRKNSVGDPCPSIVAPEGHPYRRPRSPNEEQRSRSYDQ 1030
K S+PIPI TV + + + A + +RP SP+E + +RS++
Sbjct: 996 KMRKIKSSEPIPIGSCHTVSGHEAMDLAKRLSEELAAQQ--QTQRPLSPDEPRAARSFEH 1053
Query: 1031 QHQRPKGA-------------------SKCCEGNC------RHRHSISGQMCYLKNSTGY 1065
+ GA S C G R RHSI+GQM Y K G+
Sbjct: 1054 GGKHGGGARMKDNSSNGTTGSGGSVANSHCGPGGSSSTTQRRQRHSIAGQMSYFKMLGGF 1113
Query: 1066 GFRRGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPLETLH 1125
G + ++S NSLFSTAVISGSSSAPNLR+MIPST + + GFGGVP IRPLETLH
Sbjct: 1114 GKKM-----ATSTNSLFSTAVISGSSSAPNLRDMIPSTASPS---GFGGVPPIRPLETLH 1165
Query: 1126 NALSLKHLDNFLGKMIRVIPSKTPASS 1152
NALSL+ LD+FL KM KTPASS
Sbjct: 1166 NALSLRQLDHFLEKMTTGPLFKTPASS 1192
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|221500714|ref|NP_788950.2| lethal (1) G0196, isoform I [Drosophila melanogaster] gi|239938731|sp|Q9VR59.2|VIP1_DROME RecName: Full=Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase; AltName: Full=InsP6 and PP-IP5 kinase gi|220901846|gb|AAN09569.2| lethal (1) G0196, isoform I [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 1639 bits (4243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1234 (68%), Positives = 941/1234 (76%), Gaps = 100/1234 (8%)
Query: 1 MSYTELEHGYQGL-------------RFSKPAFYVGDEGRDKSRHECTDIGYDSD----- 42
MSYTELE GYQ + + FY+G + + TD G +D
Sbjct: 1 MSYTELESGYQDISQQHQQQNPHQSQPQQRVGFYLGLQDGNGD----TDFGDSNDGMDSD 56
Query: 43 --PCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPI 99
KQV+VG+CAMAKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP
Sbjct: 57 TSTSSSNSKQVVVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPT 116
Query: 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV 159
DCL+SFHSKGFPLEKAI+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAV
Sbjct: 117 CDCLVSFHSKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAV 176
Query: 160 LDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219
LDR+SPDP HEL+ESEDHVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR
Sbjct: 177 LDRDSPDPKHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 236
Query: 220 KIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 279
KIGSRSSVYSPESRVRK+GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER
Sbjct: 237 KIGSRSSVYSPESRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 296
Query: 280 DSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNK 339
DSEGKEIRYPVIL+++EKLISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNK
Sbjct: 297 DSEGKEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNK 356
Query: 340 YYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRT 399
YYDD AKILGNMILREL PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRT
Sbjct: 357 YYDDCAKILGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRT 416
Query: 400 PKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEI 459
PKQKMKVEVRHPKFFEIF KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EI
Sbjct: 417 PKQKMKVEVRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEI 475
Query: 460 EEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLI 519
EEK+ KLEQLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ +P EPSLVLI
Sbjct: 476 EEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVEPSLVLI 535
Query: 520 LKWGGELTPAGRIQAEELGRVFRCMYPGGQG-------NGLGLLRLHSTFRHDLKIYASD 572
LKWGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYASD
Sbjct: 536 LKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDLKIYASD 595
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ K +LH+L+
Sbjct: 596 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKGRLHELM 655
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
Q DR F+ EDR+ +NPCN+ SI A+DFVKNPV CC +H LI L HII K +D K K
Sbjct: 656 QNDREFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKKDDPKTK 715
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
++ LYHGE+W+LM RW KIEKDF K+ +DISKIPDIYDCIKYDLQHNQHT+Q+DQAE
Sbjct: 716 DAILYHGETWDLMRCRWEKIEKDFSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAE 775
Query: 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESE-ENVNRLN 811
ELY+ AK +ADIVIPQEYG+T EKL I QGIC PLL+KI+ DLQRN++E E E +NRLN
Sbjct: 776 ELYIYAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDEFMNRLN 835
Query: 812 PQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVS 871
P YSHGV+SP RHVRTRLYFTSESH+HSLLTVLRYGGL V DEQW RAM+Y+SMVS
Sbjct: 836 PHYSHGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVV--TDEQWRRAMDYISMVS 893
Query: 872 ELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKK 931
ELNYMSQ+VIMLYEDPTKDPTS+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHS D
Sbjct: 894 ELNYMSQIVIMLYEDPTKDPTSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSHGDNAC 953
Query: 932 NL----------PRIDQEDTEFYSTDAEDNTGSSKSTSDQDSP-------TSAEGPSVDQ 974
N+ RI++E+ S E+ G + TS Q S + A G + +
Sbjct: 954 NVSLQSSDESNPARIEEEND---SNSGEEREGKKRGTSGQRSTDRSAERISPAFGFNRLE 1010
Query: 975 SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEG-------------HPYRRPRSPNE 1021
+ K S+PIPI + D + P R +P+
Sbjct: 1011 LRSKQFKSKPIPIGAHHTVSGHEAMDLAKRLNEELASHQQQQNQQLRPISPDIRAVTPDC 1070
Query: 1022 EQRSRSYDQQHQRPKGASKCCEGNC--------------------RHRHSISGQMCYLKN 1061
E RSRS++ QRP E + R RHSI+GQM Y+K
Sbjct: 1071 EPRSRSFE---QRPTSGVCAKEPDSQVSVSVSASVSSANASTSSRRQRHSIAGQMSYMKM 1127
Query: 1062 STGYGFRRGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPL 1121
GF + +A +S NSLFSTAVISGSSSAPNLR+MI +++ GFG VP IRPL
Sbjct: 1128 LGFGGFSKKMA---TSANSLFSTAVISGSSSAPNLRDMITVSSS-----GFGDVPPIRPL 1179
Query: 1122 ETLHNALSLKHLDNFLGKMIRVIPSKTPASSPPK 1155
ETLHNALSL+ LD+FL MI KTP SPP+
Sbjct: 1180 ETLHNALSLRKLDSFLQDMILAQIFKTPTGSPPR 1213
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|221500704|ref|NP_788951.2| lethal (1) G0196, isoform G [Drosophila melanogaster] gi|220901844|gb|AAN09571.2| lethal (1) G0196, isoform G [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 1636 bits (4236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1234 (68%), Positives = 942/1234 (76%), Gaps = 100/1234 (8%)
Query: 1 MSYTELEHGYQGL-------------RFSKPAFYVGDEGRDKSRHECTDIGYDSDPCCEE 47
MSYTELE GYQ + + FY+G + + TD G +D +
Sbjct: 1 MSYTELESGYQDISQQHQQQNPHQSQPQQRVGFYLGLQDGNGD----TDFGDSNDGMDSD 56
Query: 48 G-------KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPI 99
KQV+VG+CAMAKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP
Sbjct: 57 TSTSSSNSKQVVVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPT 116
Query: 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV 159
DCL+SFHSKGFPLEKAI+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAV
Sbjct: 117 CDCLVSFHSKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAV 176
Query: 160 LDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219
LDR+SPDP HEL+ESEDHVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR
Sbjct: 177 LDRDSPDPKHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 236
Query: 220 KIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 279
KIGSRSSVYSPESRVRK+GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER
Sbjct: 237 KIGSRSSVYSPESRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 296
Query: 280 DSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNK 339
DSEGKEIRYPVIL+++EKLISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNK
Sbjct: 297 DSEGKEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNK 356
Query: 340 YYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRT 399
YYDD AKILGNMILREL PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRT
Sbjct: 357 YYDDCAKILGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRT 416
Query: 400 PKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEI 459
PKQKMKVEVRHPKFFEIF KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EI
Sbjct: 417 PKQKMKVEVRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEI 475
Query: 460 EEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLI 519
EEK+ KLEQLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ +P EPSLVLI
Sbjct: 476 EEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVEPSLVLI 535
Query: 520 LKWGGELTPAGRIQAEELGRVFRCMYPGGQG-------NGLGLLRLHSTFRHDLKIYASD 572
LKWGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYASD
Sbjct: 536 LKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDLKIYASD 595
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ K +LH+L+
Sbjct: 596 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKGRLHELM 655
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
Q DR F+ EDR+ +NPCN+ SI A+DFVKNPV CC +H LI L HII K +D K K
Sbjct: 656 QNDREFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKKDDPKTK 715
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
++ LYHGE+W+LM RW KIEKDF K+ +DISKIPDIYDCIKYDLQHNQHT+Q+DQAE
Sbjct: 716 DAILYHGETWDLMRCRWEKIEKDFSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAE 775
Query: 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESE-ENVNRLN 811
ELY+ AK +ADIVIPQEYG+T EKL I QGIC PLL+KI+ DLQRN++E E E +NRLN
Sbjct: 776 ELYIYAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDEFMNRLN 835
Query: 812 PQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVS 871
P YSHGV+SP RHVRTRLYFTSESH+HSLLTVLRYGGL V DEQW RAM+Y+SMVS
Sbjct: 836 PHYSHGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVV--TDEQWRRAMDYISMVS 893
Query: 872 ELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKK 931
ELNYMSQ+VIMLYEDPTKDPTS+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHS D
Sbjct: 894 ELNYMSQIVIMLYEDPTKDPTSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSHGDNAC 953
Query: 932 NL----------PRIDQEDTEFYSTDAEDNTGSSKSTSDQDSP-------TSAEGPSVDQ 974
N+ RI++E+ S E+ G + TS Q S + A G + +
Sbjct: 954 NVSLQSSDESNPARIEEEND---SNSGEEREGKKRGTSGQRSTDRSAERISPAFGFNRLE 1010
Query: 975 SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEG-------------HPYRRPRSPNE 1021
+ K S+PIPI + D + P R +P+
Sbjct: 1011 LRSKQFKSKPIPIGAHHTVSGHEAMDLAKRLNEELASHQQQQNQQLRPISPDIRAVTPDC 1070
Query: 1022 EQRSRSYDQQHQRPKGASKCCEGNC--------------------RHRHSISGQMCYLKN 1061
E RSRS++ QRP E + R RHSI+GQM Y+K
Sbjct: 1071 EPRSRSFE---QRPTSGVCAKEPDSQVSVSVSASVSSANASTSSRRQRHSIAGQMSYMKM 1127
Query: 1062 STGYGFRRGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPL 1121
GF + +A +S NSLFSTAVISGSSSAPNLR+MI +++ GFG VP IRPL
Sbjct: 1128 LGFGGFSKKMA---TSANSLFSTAVISGSSSAPNLRDMITVSSS-----GFGDVPPIRPL 1179
Query: 1122 ETLHNALSLKHLDNFLGKMIRVIPSKTPASSPPK 1155
ETLHNALSL+ LD+FL MI KTP SPP+
Sbjct: 1180 ETLHNALSLRKLDSFLQDMILAQIFKTPTGSPPR 1213
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307174137|gb|EFN64795.1| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 1626 bits (4211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 814/1106 (73%), Positives = 897/1106 (81%), Gaps = 71/1106 (6%)
Query: 1 MSYTELEHGYQGLR-FSKPAFYVGDEG-----------RDKSRHE----CT-DIGYDSDP 43
MSYTELEHGYQGLR S+P FY+GD R R E CT D Y
Sbjct: 1 MSYTELEHGYQGLRNASRPMFYIGDINTVQPSVIPSIYRSSKRPELPEGCTQDDAYMGSS 60
Query: 44 CCE-EGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQK-PVDEWPIVD 101
E EGKQV+VG+CAMAKKSQSKPMKEILTRLEEFE+IK+IVF EE I K PV++WPIVD
Sbjct: 61 DVEGEGKQVLVGICAMAKKSQSKPMKEILTRLEEFEYIKIIVFPEEVILKEPVEDWPIVD 120
Query: 102 CLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLD 161
CLISFHSKGFPL+KAI YA+LRKPF+INNL MQYDIQDRR+VYA+LE E IEIPRYAVLD
Sbjct: 121 CLISFHSKGFPLDKAINYASLRKPFIINNLPMQYDIQDRRRVYAILESEDIEIPRYAVLD 180
Query: 162 RESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKI 221
R+SPDP +HELVESEDHVEVNG+ FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKI
Sbjct: 181 RDSPDPKQHELVESEDHVEVNGVTFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKI 240
Query: 222 GSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDS 281
GSRSSVYSPESRVRKSGS+IYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDS
Sbjct: 241 GSRSSVYSPESRVRKSGSYIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDS 300
Query: 282 EGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYY 341
EGKEIRYPVILSNAEKLISRKVC+AFKQTVCGFDLLRANG+SFVCDVNGFSFVKNSNKYY
Sbjct: 301 EGKEIRYPVILSNAEKLISRKVCMAFKQTVCGFDLLRANGQSFVCDVNGFSFVKNSNKYY 360
Query: 342 DDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPK 401
DD AKILGNMILRELAPTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRTPK
Sbjct: 361 DDCAKILGNMILRELAPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRTPK 420
Query: 402 QKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEE 461
QKMKVEVRHPKFFEIF KY G GHVKLK+PKQLQE+LD AR LL EI++ +A PE+EE
Sbjct: 421 QKMKVEVRHPKFFEIFAKYDGYKHGHVKLKRPKQLQEILDTARSLLAEIQHRAAGPELEE 480
Query: 462 KQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILK 521
KQGKLEQLK VLEMYGHFSGINRKVQ+KYQP+GRPRGSSSD + D+ + EPSLVLILK
Sbjct: 481 KQGKLEQLKSVLEMYGHFSGINRKVQLKYQPRGRPRGSSSD-DGSDLNRLGEPSLVLILK 539
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQG----------NGLGLLRLHSTFRHDLKIYAS 571
WGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYAS
Sbjct: 540 WGGELTPAGRIQAEELGRIFRCMYPGGQGRHLSGEYAGAQGLGLLRLHSTFRHDLKIYAS 599
Query: 572 DEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDL 631
DEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+VK +LH+L
Sbjct: 600 DEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNMVKTRLHEL 659
Query: 632 LQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKC 691
LQ+DR FT EDR+++NP NA SIN A+DFVKNPV+CC+ +H LI L I++ K ED K
Sbjct: 660 LQQDREFTREDREQINPGNALSINAALDFVKNPVRCCQHVHTLIQKLLDIVRIKKEDPKT 719
Query: 692 KESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQA 751
K++ LYHGE+WELMGRRW KIEKDFC KN +DISKIPDIYDCIKYDLQHN HT+QF+ A
Sbjct: 720 KDTILYHGETWELMGRRWGKIEKDFCTKNKLFDISKIPDIYDCIKYDLQHNNHTLQFEHA 779
Query: 752 EELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLN 811
EELY AK +ADIVIPQEYG+T+ EKLTI QGIC PLLKKIRADLQRN+EESEE+VNRLN
Sbjct: 780 EELYTYAKSLADIVIPQEYGLTVQEKLTIGQGICTPLLKKIRADLQRNIEESEESVNRLN 839
Query: 812 PQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVS 871
P+YSHGVSSPGRHVRTRLYFTSESH+HSLLTVLRYGGL + V DEQW RAMEYVSMVS
Sbjct: 840 PRYSHGVSSPGRHVRTRLYFTSESHVHSLLTVLRYGGLLDVV--KDEQWRRAMEYVSMVS 897
Query: 872 ELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKK 931
ELNYMSQVV+MLYEDPTKDP+S+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHSRN+
Sbjct: 898 ELNYMSQVVVMLYEDPTKDPSSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSRNESSH 957
Query: 932 NL---------------PRIDQEDTE--------------------FYSTDAEDNTGSSK 956
N+ RI++ED E TDA D+ S
Sbjct: 958 NMGESGGSGQDTSSQCSTRIEEEDAELGIIEDDLMSPTVQTDASPPLMETDAMDSMLDSP 1017
Query: 957 STSDQDSPTSAEGPSVDQ--SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHPYR 1014
+TS + +D+ G S PIPI+ + + + + A +
Sbjct: 1018 TTSRAIDMMDLDPNMMDEPFDSGFLQSSAPIPISARTVA-GHEAARLGSQLAASQRQRRS 1076
Query: 1015 RPRSPNEEQRSRSYDQQHQ-RPKGAS 1039
R E R+RSYD Q Q +P+ A+
Sbjct: 1077 REAGTIMEPRARSYDHQRQEKPEKAA 1102
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|51092222|gb|AAT94524.1| GH02989p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 1625 bits (4208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 836/1231 (67%), Positives = 939/1231 (76%), Gaps = 94/1231 (7%)
Query: 1 MSYTELEHGYQGL-------------RFSKPAFYVGDEGRDKSRHECTDIGYDSDPCCEE 47
MSYTELE GYQ + + FY+G + + TD G +D +
Sbjct: 1 MSYTELESGYQDISQQHQQQNPHQSQPQQRVGFYLGLQDGNGD----TDFGDSNDGMDSD 56
Query: 48 G-------KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPI 99
KQV+VG+CAMAKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP
Sbjct: 57 TSTSSSNSKQVVVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPT 116
Query: 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV 159
DCL+SFHSKGFPLEKAI+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAV
Sbjct: 117 CDCLVSFHSKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAV 176
Query: 160 LDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219
LDR+SPDP HEL+ESEDHVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR
Sbjct: 177 LDRDSPDPKHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 236
Query: 220 KIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 279
KIGSRSSVYSPESRVRK+GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER
Sbjct: 237 KIGSRSSVYSPESRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 296
Query: 280 DSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNK 339
DSEGKEIRYPVIL+++EKLISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNK
Sbjct: 297 DSEGKEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNK 356
Query: 340 YYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRT 399
YYDD AKILGNMILREL PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRT
Sbjct: 357 YYDDCAKILGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRT 416
Query: 400 PKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEI 459
PKQKMKVEVRHPKFFEIF KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EI
Sbjct: 417 PKQKMKVEVRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEI 475
Query: 460 EEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLI 519
EEK+ KLEQLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ +P EPSLVLI
Sbjct: 476 EEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVEPSLVLI 535
Query: 520 LKWGGELTPAGRIQAEELGRVFRCMYPGGQG-------NGLGLLRLHSTFRHDLKIYASD 572
LKWGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYASD
Sbjct: 536 LKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDLKIYASD 595
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ K +LH+L+
Sbjct: 596 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKGRLHELM 655
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
Q DR F+ EDR+ +NPCN+ SI A+DFVKNPV CC +H LI L HII K +D K K
Sbjct: 656 QNDREFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKKDDPKTK 715
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
++ LYHGE+W+LM RW KIEKDF K+ +DISKIPDIYDCIKYDLQHNQHT+Q+DQAE
Sbjct: 716 DAILYHGETWDLMRCRWEKIEKDFSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAE 775
Query: 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESE-ENVNRLN 811
ELY+ AK +ADIVIPQEYG+T EKL I QGIC PLL+KI+ DLQRN++E E E +NRLN
Sbjct: 776 ELYIYAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDEFMNRLN 835
Query: 812 PQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVS 871
P YSHGV+SP RHVRTRLYFTSESH+HSLLTVLRYGGL V DEQW RAM+Y+SMVS
Sbjct: 836 PHYSHGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVV--TDEQWRRAMDYISMVS 893
Query: 872 ELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKK 931
ELNYMSQ+VIMLYEDPTKDPTS+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHS D
Sbjct: 894 ELNYMSQIVIMLYEDPTKDPTSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSHGDNAC 953
Query: 932 NL----------PRIDQEDTEFYSTDAEDNTGSSKSTSDQDSP-------TSAEGPSVDQ 974
N+ RI++E+ S E+ G + TS Q S + A G + +
Sbjct: 954 NVSLQSSDESNPARIEEEND---SNSGEEREGKKRGTSGQRSTDRSAERISPAFGFNRLE 1010
Query: 975 SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEG-------------HPYRRPRSPNE 1021
+ K S+PIPI + D + P R +P+
Sbjct: 1011 LRSKQFKSKPIPIGAHHTVSGHEAMDLAKRLNEELASHQQQQNQQLRPISPDIRAVTPDC 1070
Query: 1022 EQRSRSYDQQ------HQRPKGASKCCEGNC-----------RHRHSISGQMCYLKNSTG 1064
E RSRS++Q+ + P G R R I+G+M +K
Sbjct: 1071 EPRSRSFEQRPTSGVCAKEPDGRVSVSVSASVSSANASTSSRRQRRGIAGRMSCMKMLGF 1130
Query: 1065 YGFRRGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPLETL 1124
GF + +A +S NSLFSTAVISGSSSAPNLR+MI +++ GFG VP IRPLETL
Sbjct: 1131 GGFSKKMA---TSANSLFSTAVISGSSSAPNLRDMITVSSS-----GFGDVPPIRPLETL 1182
Query: 1125 HNALSLKHLDNFLGKMIRVIPSKTPASSPPK 1155
HNALSL+ LD+FL MI KTP SPP+
Sbjct: 1183 HNALSLRKLDSFLQDMILAQIFKTPTGSPPR 1213
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380012012|ref|XP_003690084.1| PREDICTED: LOW QUALITY PROTEIN: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 1624 bits (4205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 808/1108 (72%), Positives = 898/1108 (81%), Gaps = 79/1108 (7%)
Query: 1 MSYTELEHGYQGLR-FSKPAFYVGDEG---------------RDKSRHECTDIGYDSDPC 44
MSYTELEHGYQGLR S+P FYVGD R R E +D + D C
Sbjct: 1 MSYTELEHGYQGLRSASRPIFYVGDLNTVQSTLVGPVASSIYRSSKRAELSDGCSNDDGC 60
Query: 45 CE------EGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQK-PVDEW 97
EGKQV+VG+CAMAKKSQSKPMKEILTRLEEFE+IK++VF EE I K V++W
Sbjct: 61 MGGSDLEGEGKQVLVGICAMAKKSQSKPMKEILTRLEEFEYIKIVVFPEEVILKESVEDW 120
Query: 98 PIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRY 157
PIVDCLISFHSKGFPL+KAI YANLR PF+INNL MQYDIQDRR+VYA+LE EGIEIPRY
Sbjct: 121 PIVDCLISFHSKGFPLDKAINYANLRNPFIINNLPMQYDIQDRRRVYAILESEGIEIPRY 180
Query: 158 AVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 217
AVLDR+S DP HELVESEDHVEVNG+ FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL
Sbjct: 181 AVLDRDSSDPKHHELVESEDHVEVNGVTFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 240
Query: 218 FRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKV 277
FRKIGSRSSVYSPESRVRK+GS+IYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKV
Sbjct: 241 FRKIGSRSSVYSPESRVRKTGSYIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKV 300
Query: 278 ERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNS 337
ERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANG+SFVCDVNGFSFVKNS
Sbjct: 301 ERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGQSFVCDVNGFSFVKNS 360
Query: 338 NKYYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGD 397
NKYYDD AKILGNMILRELAPTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGD
Sbjct: 361 NKYYDDCAKILGNMILRELAPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGD 420
Query: 398 RTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADP 457
RTPKQKMKVEVRHPKFFEIF KY G GH+ LK+PKQLQE+LD AR LL EI++ +A P
Sbjct: 421 RTPKQKMKVEVRHPKFFEIFAKYDGYKHGHIXLKRPKQLQEILDTARSLLAEIQHRAAGP 480
Query: 458 EIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLV 517
E+EEKQGKLEQLK VLEMYGHFSGINRKVQMKYQP+GRPRGSSSD++ + EPSLV
Sbjct: 481 ELEEKQGKLEQLKSVLEMYGHFSGINRKVQMKYQPRGRPRGSSSDDD-----RLGEPSLV 535
Query: 518 LILKWGGELTPAGRIQAEELGRVFRCMYPGGQGN-----GLGLLRLHSTFRHDLKIYASD 572
LILKWGGELTPAGRIQAEELGR+FRCMYPGGQG+ GLGLLRLHSTFRHDLKIYASD
Sbjct: 536 LILKWGGELTPAGRIQAEELGRIFRCMYPGGQGDYAGAQGLGLLRLHSTFRHDLKIYASD 595
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+VK +LH+LL
Sbjct: 596 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNMVKTRLHELL 655
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
Q+DR FT EDR+++NP NA SIN AMDFVKNPV+CC+ +H LI L I++ K +D K K
Sbjct: 656 QQDREFTREDREQINPGNALSINAAMDFVKNPVRCCQHVHTLIQKLMDIVRIKKDDPKTK 715
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
++ LYHGE+WELMGRRW KIEKDFC KN ++DISKIPDIYDCIKYDLQHN HT+QF+ AE
Sbjct: 716 DAILYHGETWELMGRRWGKIEKDFCTKNKRFDISKIPDIYDCIKYDLQHNNHTLQFEHAE 775
Query: 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEES-EENVNRLN 811
ELY+ +KY+ADIVIPQEYG+T+ EKLTI QGIC PLLKKIRADLQRN+EES EE VNRLN
Sbjct: 776 ELYIYSKYLADIVIPQEYGLTVQEKLTIGQGICTPLLKKIRADLQRNIEESGEETVNRLN 835
Query: 812 PQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVS 871
P+YSHGVSSPGRHVRTRLYFTSESH+HSLLTVLRYGGL + M DEQW RAMEYVSMVS
Sbjct: 836 PRYSHGVSSPGRHVRTRLYFTSESHVHSLLTVLRYGGLLDV--MKDEQWRRAMEYVSMVS 893
Query: 872 ELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKK 931
ELNYMSQ+V+MLYEDPTKDP+S+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHSRN+
Sbjct: 894 ELNYMSQIVVMLYEDPTKDPSSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSRNESSH 953
Query: 932 NL---------------PRIDQEDTE-------FYSTDAEDNTGSSKSTSDQ-----DSP 964
N+ RI++ED E F + + T +D DSP
Sbjct: 954 NVGESGGSAQDTISQCSTRIEEEDVELGILEDDFMNPPLQSETPPPTMETDTVDAIVDSP 1013
Query: 965 TSAEGPSVDQ------------SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHP 1012
T+++ ++D G S PIPI+ + + + + A +
Sbjct: 1014 TTSK--AIDMMDLHPNMMDEPFDSGFLQSSAPIPISARTVA-GHEAARLGSQLAASQRQR 1070
Query: 1013 YRRPRSPNEEQRSRSYDQQHQ-RPKGAS 1039
R E R+RSYD Q Q +P+ A+
Sbjct: 1071 RDTERGTIVEPRARSYDHQRQDKPEKAA 1098
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|221500709|ref|NP_788952.2| lethal (1) G0196, isoform H [Drosophila melanogaster] gi|220901845|gb|AAN09570.3| lethal (1) G0196, isoform H [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 1620 bits (4194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 824/1170 (70%), Positives = 918/1170 (78%), Gaps = 80/1170 (6%)
Query: 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFH 107
KQV+VG+CAMAKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP DCL+SFH
Sbjct: 172 KQVVVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPTCDCLVSFH 231
Query: 108 SKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDP 167
SKGFPLEKAI+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAVLDR+SPDP
Sbjct: 232 SKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAVLDRDSPDP 291
Query: 168 VKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 227
HEL+ESEDHVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV
Sbjct: 292 KHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 351
Query: 228 YSPESRVRKSGSFIYEDFMPTD----GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 283
YSPESRVRK+GSFIYEDFMPTD GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG
Sbjct: 352 YSPESRVRKTGSFIYEDFMPTDVYFSGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 411
Query: 284 KEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDD 343
KEIRYPVIL+++EKLISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNKYYDD
Sbjct: 412 KEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDD 471
Query: 344 SAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQK 403
AKILGNMILREL PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRTPKQK
Sbjct: 472 CAKILGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRTPKQK 531
Query: 404 MKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQ 463
MKVEVRHPKFFEIF KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EIEEK+
Sbjct: 532 MKVEVRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEIEEKE 590
Query: 464 GKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWG 523
KLEQLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ +P EPSLVLILKWG
Sbjct: 591 SKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVEPSLVLILKWG 650
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQG-------NGLGLLRLHSTFRHDLKIYASDEGRV 576
GELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLKIYASDEGRV
Sbjct: 651 GELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDLKIYASDEGRV 710
Query: 577 QMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDR 636
QMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+ K +LH+L+Q DR
Sbjct: 711 QMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKGRLHELMQNDR 770
Query: 637 TFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSL 696
F+ EDR+ +NPCN+ SI A+DFVKNPV CC +H LI L HII K +D K K++ L
Sbjct: 771 EFSKEDRELINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKKDDPKTKDAIL 830
Query: 697 YHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYL 756
YHGE+W+LM RW KIEKDF K+ +DISKIPDIYDCIKYDLQHNQHT+Q+DQAEELY+
Sbjct: 831 YHGETWDLMRCRWEKIEKDFSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAEELYI 890
Query: 757 NAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESE-ENVNRLNPQYS 815
AK +ADIVIPQEYG+T EKL I QGIC PLL+KI+ DLQRN++E E E +NRLNP YS
Sbjct: 891 YAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDEFMNRLNPHYS 950
Query: 816 HGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNY 875
HGV+SP RHVRTRLYFTSESH+HSLLTVLRYGGL V DEQW RAM+Y+SMVSELNY
Sbjct: 951 HGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVV--TDEQWRRAMDYISMVSELNY 1008
Query: 876 MSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNL-- 933
MSQ+VIMLYEDPTKDPTS+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHS D N+
Sbjct: 1009 MSQIVIMLYEDPTKDPTSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSHGDNACNVSL 1068
Query: 934 --------PRIDQEDTEFYSTDAEDNTGSSKSTSDQDSP-------TSAEGPSVDQSKGK 978
RI++E+ S E+ G + TS Q S + A G + + + K
Sbjct: 1069 QSSDESNPARIEEEND---SNSGEEREGKKRGTSGQRSTDRSAERISPAFGFNRLELRSK 1125
Query: 979 FVLSQPIPITVKDLKRKNSVGDPCPSIVAPEG-------------HPYRRPRSPNEEQRS 1025
S+PIPI + D + P R +P+ E RS
Sbjct: 1126 QFKSKPIPIGAHHTVSGHEAMDLAKRLNEELASHQQQQNQQLRPISPDIRAVTPDCEPRS 1185
Query: 1026 RSYDQQHQRPKGASKCCEGNC--------------------RHRHSISGQMCYLKNSTGY 1065
RS++ QRP E + R RHSI+GQM Y+K
Sbjct: 1186 RSFE---QRPTSGVCAKEPDSQVSVSVSASVSSANASTSSRRQRHSIAGQMSYMKMLGFG 1242
Query: 1066 GFRRGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPLETLH 1125
GF + +A +S NSLFSTAVISGSSSAPNLR+MI +++ GFG VP IRPLETLH
Sbjct: 1243 GFSKKMA---TSANSLFSTAVISGSSSAPNLRDMITVSSS-----GFGDVPPIRPLETLH 1294
Query: 1126 NALSLKHLDNFLGKMIRVIPSKTPASSPPK 1155
NALSL+ LD+FL MI KTP SPP+
Sbjct: 1295 NALSLRKLDSFLQDMILAQIFKTPTGSPPR 1324
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|198470296|ref|XP_001355286.2| GA13115 [Drosophila pseudoobscura pseudoobscura] gi|198145382|gb|EAL32343.2| GA13115 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Score = 1618 bits (4191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 828/1206 (68%), Positives = 922/1206 (76%), Gaps = 118/1206 (9%)
Query: 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFH 107
KQV+VG+CAMAKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP DCL+SFH
Sbjct: 377 KQVMVGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPTCDCLVSFH 436
Query: 108 SKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDP 167
SKGFPLEKAI+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAVLDR+SPDP
Sbjct: 437 SKGFPLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAVLDRDSPDP 496
Query: 168 VKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 227
HEL+ESEDHVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV
Sbjct: 497 KHHELIESEDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 556
Query: 228 YSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIR 287
YSPESRVRK+GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIR
Sbjct: 557 YSPESRVRKTGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIR 616
Query: 288 YPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKI 347
YPVIL+++EKLISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNKYYDD AKI
Sbjct: 617 YPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDDCAKI 676
Query: 348 LGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVE 407
LGNMILREL PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRTPKQKMKVE
Sbjct: 677 LGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVE 736
Query: 408 VRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLE 467
VRHPKFFEIF KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EIEEK+ KLE
Sbjct: 737 VRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEIEEKESKLE 795
Query: 468 QLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVC------------------ 509
QLK VLEMYGHFSGINRKVQMKYQPKGRPRGSSSD+ + V
Sbjct: 796 QLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDSKSLVVSNPKRGLVLKPGEANLPA 855
Query: 510 -KPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQG-------NGLGLLRLHST 561
P EPSLVLILKWGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHST
Sbjct: 856 ESPAEPSLVLILKWGGELTPAGRIQAEELGRIFRCMYPGGQGRSDYSGTQGLGLLRLHST 915
Query: 562 FRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQ 621
FRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+Q
Sbjct: 916 FRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQ 975
Query: 622 NIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHI 681
N K +LH+L+Q DR FT EDR+ +NPCN+ SI A+DFVKNPV CC +H LI L HI
Sbjct: 976 NRAKGRLHELMQNDREFTKEDREHINPCNSKSITQALDFVKNPVDCCHHVHLLIRELLHI 1035
Query: 682 IQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQH 741
I K +D K K++ LYHGE+W+LM RW KIEKDF K+ +DISKIPDIYDCIKYDLQH
Sbjct: 1036 ISIKKDDPKTKDAILYHGETWDLMRCRWEKIEKDFSTKSKLFDISKIPDIYDCIKYDLQH 1095
Query: 742 NQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVE 801
NQHT+Q+DQAEELY+ AK +ADIVIPQEYG+T EKL I QGIC PLL+KI+ DLQRN++
Sbjct: 1096 NQHTLQYDQAEELYIYAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNID 1155
Query: 802 ESE-ENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQW 860
E E E +NRLNP YSHGV+SP RHVRTRLYFTSESH+HSLLTVLRYGGL V DEQW
Sbjct: 1156 EVEDEFMNRLNPHYSHGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVV--TDEQW 1213
Query: 861 MRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPG 920
RAM+Y+SMVSELNYMSQ+VIMLYEDPTKDPTS+ERFH+ELHFSPGVNCCVQKNLPPGPG
Sbjct: 1214 RRAMDYISMVSELNYMSQIVIMLYEDPTKDPTSEERFHVELHFSPGVNCCVQKNLPPGPG 1273
Query: 921 FRPHSRNDQKKNLPRIDQEDTEFYSTDAE-DNTGSSKSTSDQDS---PTSAEGPSVD--- 973
FRPHS D N+ ++ + E DN+G ++T S SA G S +
Sbjct: 1274 FRPHSHGDNACNVSMQSSDEANPARIEEENDNSGEEQNTKKAGSCEEHISASGSSSNIFN 1333
Query: 974 ------QSKGKFVLSQPIPITVKDLKRKNSVGDPCPSI---------------------- 1005
+ + K + S+PIPI + D +
Sbjct: 1334 AGFNRLELRTKHLKSKPIPIGSHHTVSGHEAMDLAKRLNEELASQQHQLSHQQQQQQQQQ 1393
Query: 1006 ---------------VAPEGHPYRRPRSPNEEQRSRSYDQQHQRPKGASKCCEGNC---- 1046
++P+ R SP+ E RSRS++ QRP A CC+
Sbjct: 1394 QQQQQQQQQQQQLRPISPD----MRAVSPDCEPRSRSFE---QRPT-AGNCCKETDSTVS 1445
Query: 1047 -----------------RHRHSISGQMCYLKNSTGYGFRRGLALSSSSGNSLFSTAVISG 1089
R RHSI+GQM Y+K GF + +A +S NSLFSTAVISG
Sbjct: 1446 VSVSASASSANSSTSSRRQRHSIAGQMSYMKMLGFGGFSKKMA---TSANSLFSTAVISG 1502
Query: 1090 SSSAPNLRNMIPSTTNVTALDGFGGVPSIRPLETLHNALSLKHLDNFLGKMIRVIPSKTP 1149
SSSAPNLR+MIP +++ GFG VP IRPLETLHNALSL+ LD FL MI KTP
Sbjct: 1503 SSSAPNLRDMIPVSSS-----GFGDVPPIRPLETLHNALSLRKLDCFLQDMILAQIFKTP 1557
Query: 1150 ASSPPK 1155
SPP+
Sbjct: 1558 TGSPPR 1563
|
Source: Drosophila pseudoobscura pseudoobscura Species: Drosophila pseudoobscura Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350424817|ref|XP_003493922.1| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 1615 bits (4183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 810/1113 (72%), Positives = 897/1113 (80%), Gaps = 84/1113 (7%)
Query: 1 MSYTELEHGYQGLR-FSKPAFYVGDEG---------------RDKSRHECTDIGYDSDPC 44
MSYTELEHGYQGLR S+P FYVGD R R E +D + D C
Sbjct: 1 MSYTELEHGYQGLRSASRPIFYVGDLNTVQPTLVGPVASSIYRSSKRAELSDGCSNDDGC 60
Query: 45 CE------EGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQK-PVDEW 97
EGKQV+VG+CAMAKKSQSKPMKEILTRLEEFE+IK++VF EE I K V++W
Sbjct: 61 MGGSDLEGEGKQVLVGICAMAKKSQSKPMKEILTRLEEFEYIKIVVFPEEVILKESVEDW 120
Query: 98 PIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRY 157
PIVDCLISFHSKGFPL+KAI YANLR PF+INNL MQYDIQDRR+VYA+LE EGIEIPRY
Sbjct: 121 PIVDCLISFHSKGFPLDKAINYANLRNPFIINNLPMQYDIQDRRRVYAILESEGIEIPRY 180
Query: 158 AVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 217
AVLDR+S DP HELVESEDHVEVNG+ FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL
Sbjct: 181 AVLDRDSSDPKHHELVESEDHVEVNGVTFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 240
Query: 218 FRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKV 277
FRKIGSRSSVYSPESRVRK+GS+IYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKV
Sbjct: 241 FRKIGSRSSVYSPESRVRKTGSYIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKV 300
Query: 278 ERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNS 337
ERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANG+SFVCDVNGFSFVKNS
Sbjct: 301 ERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGQSFVCDVNGFSFVKNS 360
Query: 338 NKYYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGD 397
NKYYDD AKILGNMILRELAPTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGD
Sbjct: 361 NKYYDDCAKILGNMILRELAPTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGD 420
Query: 398 RTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADP 457
RTPKQKMKVEVRHPKFFEIF KY G GH+KLK+PKQLQE+LD AR LL EI++ +A P
Sbjct: 421 RTPKQKMKVEVRHPKFFEIFAKYDGYKHGHIKLKRPKQLQEILDTARSLLAEIQHRAAGP 480
Query: 458 EIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLV 517
E+EEKQGKLEQLK VLEMYGHFSGINRKVQMKYQP+GRPRGSSSD++ + EPSLV
Sbjct: 481 ELEEKQGKLEQLKSVLEMYGHFSGINRKVQMKYQPRGRPRGSSSDDD-----RLGEPSLV 535
Query: 518 LILKWGGELTPAGRIQAEELGRVFRCMYPGGQG----------NGLGLLRLHSTFRHDLK 567
LILKWGGELTPAGRIQAEELGR+FRCMYPGGQG GLGLLRLHSTFRHDLK
Sbjct: 536 LILKWGGELTPAGRIQAEELGRIFRCMYPGGQGRHLSGDYAGAQGLGLLRLHSTFRHDLK 595
Query: 568 IYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAK 627
IYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND D+SK+QN+VK +
Sbjct: 596 IYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDCDSSKYQNMVKTR 655
Query: 628 LHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLE 687
LH+LLQ+DR FT EDR+++NP NA SIN AMDFVKNPV+CC+ +H LI L I++ K +
Sbjct: 656 LHELLQQDREFTCEDREQINPGNALSINAAMDFVKNPVRCCQHVHTLIQKLMDIVRIKKD 715
Query: 688 DVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQ 747
D K K++ LYHGE+WELMGRRW KIEKDFC KN ++DISKIPDIYDCIKYDLQHN HT+Q
Sbjct: 716 DPKTKDAILYHGETWELMGRRWGKIEKDFCTKNKRFDISKIPDIYDCIKYDLQHNNHTLQ 775
Query: 748 FDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEES-EEN 806
F+ AEELY+ +KY+ADIVIPQEYG+T+ EKLTI QGIC PLLKKIRADLQRN+EE+ EE
Sbjct: 776 FEHAEELYIYSKYLADIVIPQEYGLTVQEKLTIGQGICTPLLKKIRADLQRNIEETGEET 835
Query: 807 VNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEY 866
VNRLNP+YSHGVSSPGRHVRTRLYFTSESH+HSLLTVLRYGGL + M DEQW RAMEY
Sbjct: 836 VNRLNPRYSHGVSSPGRHVRTRLYFTSESHVHSLLTVLRYGGLLDV--MKDEQWRRAMEY 893
Query: 867 VSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSR 926
VSMVSELNYMSQ+V+MLYEDPTKDP+S+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHSR
Sbjct: 894 VSMVSELNYMSQIVVMLYEDPTKDPSSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSR 953
Query: 927 NDQKKNL---------------PRIDQEDTE-------FYSTDAEDNTGSSKSTSD---- 960
N+ N+ RI++ED E F + + T +D
Sbjct: 954 NESSHNVGESGGSAQDTISQCSTRIEEEDVELGILEDDFMNPPLQSETPPRTMETDTVDA 1013
Query: 961 -QDSPTSAEGPSVDQ------------SKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVA 1007
DSPT++ G VD G S PIPI+ + + + + A
Sbjct: 1014 MMDSPTTSRG--VDMMDLHPNMMDEPFDSGFLQSSAPIPISARTVA-GHEAARLGSQLAA 1070
Query: 1008 PEGHPYRRPRSPNEEQRSRSYDQQHQ-RPKGAS 1039
+ R E R+RSYD Q Q +P+ A+
Sbjct: 1071 SQRQRRDAERGTIVEPRARSYDHQRQDKPEKAA 1103
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1266 | ||||||
| FB|FBgn0027279 | 1696 | l(1)G0196 "lethal (1) G0196" [ | 0.874 | 0.652 | 0.664 | 0.0 | |
| UNIPROTKB|F1MNG6 | 1228 | PPIP5K2 "Uncharacterized prote | 0.883 | 0.911 | 0.579 | 0.0 | |
| UNIPROTKB|F1PZ17 | 1243 | PPIP5K2 "Uncharacterized prote | 0.834 | 0.849 | 0.587 | 0.0 | |
| UNIPROTKB|J9P559 | 1185 | PPIP5K2 "Uncharacterized prote | 0.729 | 0.778 | 0.651 | 0.0 | |
| UNIPROTKB|O43314 | 1243 | PPIP5K2 "Inositol hexakisphosp | 0.834 | 0.849 | 0.589 | 0.0 | |
| MGI|MGI:2142810 | 1129 | Ppip5k2 "diphosphoinositol pen | 0.719 | 0.806 | 0.656 | 0.0 | |
| UNIPROTKB|Q5REW0 | 1244 | PPIP5K2 "Inositol hexakisphosp | 0.834 | 0.848 | 0.588 | 0.0 | |
| UNIPROTKB|Q5XHF8 | 1131 | ppip5k2 "Inositol hexakisphosp | 0.722 | 0.809 | 0.651 | 0.0 | |
| ZFIN|ZDB-GENE-091204-125 | 1242 | si:dkey-117i20.1 "si:dkey-117i | 0.720 | 0.734 | 0.650 | 0.0 | |
| UNIPROTKB|F1NCX0 | 1087 | PPIP5K2 "Uncharacterized prote | 0.734 | 0.855 | 0.642 | 0.0 |
| FB|FBgn0027279 l(1)G0196 "lethal (1) G0196" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 3770 (1332.2 bits), Expect = 0., Sum P(4) = 0.
Identities = 760/1144 (66%), Positives = 858/1144 (75%)
Query: 7 EHGYQGLRFSKP----AFYVG--DEGRDKSRHECTDIGYDSDPCCEEG--KQVIVGVCAM 58
+H Q S+P FY+G D D + D G DSD KQV+VG+CAM
Sbjct: 16 QHQQQNPHQSQPQQRVGFYLGLQDGNGDTDFGDSND-GMDSDTSTSSSNSKQVVVGICAM 74
Query: 59 AKKSQSKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAI 117
AKK+QSKPMKEILTRL EFEFIK++ F E I ++PV WP DCL+SFHSKGFPLEKAI
Sbjct: 75 AKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPTCDCLVSFHSKGFPLEKAI 134
Query: 118 KYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177
+YA LR PFV+NNL+MQYDIQDRR+VYA+LEKEGIEIPRYAVLDR+SPDP HEL+ESED
Sbjct: 135 EYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAVLDRDSPDPKHHELIESED 194
Query: 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKS 237
HVEVNGI FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRK+
Sbjct: 195 HVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKT 254
Query: 238 GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK 297
GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVIL+++EK
Sbjct: 255 GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILNHSEK 314
Query: 298 LISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELA 357
LISRKVCLAFKQTVCGFDLLRANGKS+VCDVNGFSFVKNSNKYYDD AKILGNMILREL
Sbjct: 315 LISRKVCLAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDDCAKILGNMILRELT 374
Query: 358 PTLHIPWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIF 417
PTLHIPWSVPFQLDDPP VPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIF
Sbjct: 375 PTLHIPWSVPFQLDDPPIVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIF 434
Query: 418 YKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYG 477
KY G GHVKLK+PKQLQE+LDIAR LL+EI + A EIEEK+ KLEQLK VLEMYG
Sbjct: 435 EKYDGYKLGHVKLKRPKQLQEILDIARFLLSEI-HTKAHAEIEEKESKLEQLKNVLEMYG 493
Query: 478 HFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEEL 537
HFSGINRKVQMKYQPKGRPRGSSSD+ +P EPSLVLILKWGGELTPAGRIQAEEL
Sbjct: 494 HFSGINRKVQMKYQPKGRPRGSSSDDTNLAADQPVEPSLVLILKWGGELTPAGRIQAEEL 553
Query: 538 GRVFRCMYPXXXXXXXXXXXX-------HSTFRHDLKIYASDEGRVQMTAAAFAKGLLAL 590
GR+FRCMYP HSTFRHDLKIYASDEGRVQMTAAAFAKGLLAL
Sbjct: 554 GRIFRCMYPGGQGRSDYSGTQGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLAL 613
Query: 591 EGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCN 650
EGELTPILVQMVKSANTNGLLDND D+SK+QN+ K +LH+L+Q DR F+ EDR+ +NPCN
Sbjct: 614 EGELTPILVQMVKSANTNGLLDNDCDSSKYQNLAKGRLHELMQNDREFSKEDRELINPCN 673
Query: 651 ATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWS 710
+ SI A+DFVKNPV CC +H LI L HII K +D K K++ LYHGE+W+LM RW
Sbjct: 674 SKSITQALDFVKNPVDCCHHVHLLIRELLHIISIKKDDPKTKDAILYHGETWDLMRCRWE 733
Query: 711 KIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEY 770
KIEKDF K+ +DISKIPDIYDCIKYDLQHNQHT+Q+DQAEELY+ AK +ADIVIPQEY
Sbjct: 734 KIEKDFSTKSKLFDISKIPDIYDCIKYDLQHNQHTLQYDQAEELYIYAKNLADIVIPQEY 793
Query: 771 GMTMSEKLTISQGICVPLLKKIRADLQXXXXXXXXXXXXXX-PQYSHGVSSPGRHVRTRL 829
G+T EKL I QGIC PLL+KI+ DLQ P YSHGV+SP RHVRTRL
Sbjct: 794 GLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDEFMNRLNPHYSHGVASPQRHVRTRL 853
Query: 830 YFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTK 889
YFTSESH+HSLLTVLRYGGL V DEQW RAM+Y+SMVSELNYMSQ+VIMLYEDPTK
Sbjct: 854 YFTSESHVHSLLTVLRYGGLLNVV--TDEQWRRAMDYISMVSELNYMSQIVIMLYEDPTK 911
Query: 890 DPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAE 949
DPTS+ERFH+ELHFSPGVNCCVQKNLPPGPGFRPHS D N+ +++ + E
Sbjct: 912 DPTSEERFHVELHFSPGVNCCVQKNLPPGPGFRPHSHGDNACNVSLQSSDESNPARIEEE 971
Query: 950 DNTGSSKSTSDQDSPTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCP--SIVA 1007
+++ S + + TS + S D+S + +S +L+ K P P +
Sbjct: 972 NDSNSGEEREGKKRGTSGQR-STDRSAER--ISPAFGFNRLELRSKQFKSKPIPIGAHHT 1028
Query: 1008 PEGHPYRR-PRSPNEEQRSRSYDQQHQ-RPKGAS-KCCEGNCRHRHSISGQMCYLKNSTG 1064
GH + NEE S Q Q RP + +C R Q + ++G
Sbjct: 1029 VSGHEAMDLAKRLNEELASHQQQQNQQLRPISPDIRAVTPDCEPRSRSFEQ----RPTSG 1084
Query: 1065 YXXXXXXXXXXXXXXXXXXTAVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPLETL 1124
+A + S+S+ R+ I + + GFGG + + T
Sbjct: 1085 VCAKEPDSQVSVSVSASVSSA--NASTSSRRQRHSIAGQMSYMKMLGFGGFS--KKMATS 1140
Query: 1125 HNAL 1128
N+L
Sbjct: 1141 ANSL 1144
|
|
| UNIPROTKB|F1MNG6 PPIP5K2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 3252 (1149.8 bits), Expect = 0., P = 0.
Identities = 680/1174 (57%), Positives = 827/1174 (70%)
Query: 18 PAFYVGDEGRDKSRHECTDIGYDSDPCCEEG------KQVIVGVCAMAKKSQSKPMKEIL 71
P F+VG E + + + +D EE +Q++VG+C+MAKKS+SKPMKEIL
Sbjct: 11 PRFFVGPEDTEINAGNYRHFFHHADEDEEEEDESPPERQIVVGICSMAKKSKSKPMKEIL 70
Query: 72 TRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINN 130
R+ F++I ++VF E+ I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR PFVIN+
Sbjct: 71 ERISLFKYITVVVFEEDVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIND 130
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P + L+E EDHVEVNG VF KPF
Sbjct: 131 LNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPF 190
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG 250
VEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTDG
Sbjct: 191 VEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDG 250
Query: 251 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT 310
TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQT
Sbjct: 251 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQT 310
Query: 311 VCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQL 370
VCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+++RELAP HIPWS+P +
Sbjct: 311 VCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEA 370
Query: 371 DDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKL 430
+D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EVRH KFF++F K G G +KL
Sbjct: 371 EDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKL 430
Query: 431 KKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKY 490
KKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGINRKVQ+ Y
Sbjct: 431 KKPKQLQEVLDIARQLLMELGQNN-DSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTY 489
Query: 491 QPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXXX 550
P G P+ SS EEED + +EPSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 490 LPHGCPKTSS---EEED-SRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQG 545
Query: 551 XXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 605
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA
Sbjct: 546 DYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 605
Query: 606 NTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNP 664
N NGLLD+DSD+ S Q VKA+LH++LQRDR FT ED +K+ P + S+ +M +KNP
Sbjct: 606 NMNGLLDSDSDSLSSCQQRVKARLHEILQRDRDFTAEDYEKLTPSGSISLIKSMHLIKNP 665
Query: 665 VQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYD 724
V+ C ++ LI L I+ ++ED K + LYH E+ ELM RRWSK+EKDF KN +YD
Sbjct: 666 VKTCDTVYSLIQSLTSQIRHRMEDPKSSDIQLYHSETLELMLRRWSKLEKDFKTKNGRYD 725
Query: 725 ISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGI 784
ISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+T +EKL I++G
Sbjct: 726 ISKIPDIYDCIKYDVQHNG-SLKLEDTMELYRLSKALADIVIPQEYGITKAEKLEIAKGY 784
Query: 785 CVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVL 844
C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+HSLL++L
Sbjct: 785 CTPLVRKIRSDLQRTQDDDTVNKLH--PVYSRGVLSPERHVRTRLYFTSESHVHSLLSIL 842
Query: 845 RYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904
RYG L + DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP KD +S+ERFH+ELHFS
Sbjct: 843 RYGALCDE--SKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFS 900
Query: 905 PGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAEDNTGSSKSTSDQDS 963
PG C + KNLP G G+RP SR ++ + +ID +D E +T SK + D
Sbjct: 901 PGAKGCEEDKNLPSGYGYRPASRENEGRRAFKIDSDD--------EPHT--SKK-DEVDR 949
Query: 964 PTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHP---YRRPRSPN 1020
P V + P+P + K N P S+ +PEG +
Sbjct: 950 AVILFKPMVSEPI-HIHRKSPLPRSRK--MATNEEESPL-SVSSPEGTGTWLHYTSGVGT 1005
Query: 1021 EEQRSRSYDQQHQRPKGASKCCEGNC---RHRHSISGQMCYLKNSTGYXXXXXXXXXXXX 1077
+R RS +Q P + + +S YL+
Sbjct: 1006 GRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSH 1065
Query: 1078 XXXXXXTAVISGSSSAPNLRNMIPS----TTNVTALDGF---GGVPSIRPLETLHNALSL 1130
T+V+ GSSSAPNL++ + T+ +DGF VPSI PLETLHNALSL
Sbjct: 1066 CASLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDGFELYSMVPSICPLETLHNALSL 1125
Query: 1131 KHLDNFLGKMIRV---IPSKTPASSPPKYPSTPI 1161
K +D FL + +P KTP +S S+PI
Sbjct: 1126 KQVDEFLASIASPSSEVPRKTPETSSLTSRSSPI 1159
|
|
| UNIPROTKB|F1PZ17 PPIP5K2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 3152 (1114.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 647/1101 (58%), Positives = 788/1101 (71%)
Query: 18 PAFYVGDEGRDKSRHECTDIGYDSDPCCEEG------KQVIVGVCAMAKKSQSKPMKEIL 71
P F+VG E + S + +D EE +Q++VG+C+MAKKS+SKPMKEIL
Sbjct: 5 PRFFVGPEDTEISSGNYRHFFHHADEDEEEEDESPPERQIVVGICSMAKKSKSKPMKEIL 64
Query: 72 TRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINN 130
R+ F++I ++VF E+ I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR PFVIN+
Sbjct: 65 ERISLFKYITVVVFEEDVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIND 124
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P + L+E EDHVEVNG VF KPF
Sbjct: 125 LNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPF 184
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG 250
VEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTDG
Sbjct: 185 VEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDG 244
Query: 251 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT 310
TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQT
Sbjct: 245 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQT 304
Query: 311 VCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQL 370
VCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+++RELAP HIPWS+P +
Sbjct: 305 VCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEA 364
Query: 371 DDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKL 430
+D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EVRH KFF++F K G G +KL
Sbjct: 365 EDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKL 424
Query: 431 KKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKY 490
KKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGINRKVQ+ Y
Sbjct: 425 KKPKQLQEVLDIARQLLMELGQNN-DSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTY 483
Query: 491 QPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXXX 550
P G P+ SS EEED + +EPSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 484 LPHGCPKTSS---EEED-SRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQG 539
Query: 551 XXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 605
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA
Sbjct: 540 DYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 599
Query: 606 NTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNP 664
N NGLLD+DSD+ S Q VKA+LH++LQ+DR FT ED +K+ P + S+ +M +KNP
Sbjct: 600 NMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISLIKSMHLIKNP 659
Query: 665 VQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYD 724
V+ C +++ LI L I+ ++ED K + LYH E+ ELM RRWSK+EKDF KN +YD
Sbjct: 660 VKTCDKVYSLIQSLTSQIRHRMEDPKSSDIQLYHSETLELMLRRWSKLEKDFKTKNGRYD 719
Query: 725 ISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGI 784
ISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+T +EKL I++G
Sbjct: 720 ISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGY 778
Query: 785 CVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVL 844
C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+HSLL++L
Sbjct: 779 CTPLVRKIRSDLQRTQDDDTVNKLH--PVYSRGVLSPERHVRTRLYFTSESHVHSLLSIL 836
Query: 845 RYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904
RYG L DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP KD +S+ERFH+ELHFS
Sbjct: 837 RYGALCNE--SKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFS 894
Query: 905 PGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAEDNTGSSKSTSDQDS 963
PG C + KNLP G G+RP SR ++ + +ID +D T +D T +
Sbjct: 895 PGAKGCEEDKNLPSGYGYRPASRENEGRRSFKIDNDDEPH--TSKKDETDRAVILF---K 949
Query: 964 PTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHP---YRRPRSPN 1020
P +E + + P+P + K N P S+ +PEG +
Sbjct: 950 PMVSEPIHIHRKS-------PLPRSRK--MATNEEESPL-SVSSPEGTGTWLHYTSGVGT 999
Query: 1021 EEQRSRSYDQQHQRPKGASKCCEGNC---RHRHSISGQMCYLKNSTGYXXXXXXXXXXXX 1077
+R RS +Q P + + +S YL+
Sbjct: 1000 GRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSH 1059
Query: 1078 XXXXXXTAVISGSSSAPNLRN 1098
T+V+ GSSSAPNL++
Sbjct: 1060 CAGLFSTSVLGGSSSAPNLQD 1080
|
|
| UNIPROTKB|J9P559 PPIP5K2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 3150 (1113.9 bits), Expect = 0., Sum P(4) = 0.
Identities = 618/949 (65%), Positives = 740/949 (77%)
Query: 18 PAFYVGDEGRDKSRHECTDIGYDSDPCCEEG------KQVIVGVCAMAKKSQSKPMKEIL 71
P F+VG E + S + +D EE +Q++VG+C+MAKKS+SKPMKEIL
Sbjct: 5 PRFFVGPEDTEISSGNYRHFFHHADEDEEEEDESPPERQIVVGICSMAKKSKSKPMKEIL 64
Query: 72 TRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINN 130
R+ F++I ++VF E+ I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR PFVIN+
Sbjct: 65 ERISLFKYITVVVFEEDVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIND 124
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P + L+E EDHVEVNG VF KPF
Sbjct: 125 LNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPF 184
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG 250
VEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTDG
Sbjct: 185 VEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDG 244
Query: 251 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT 310
TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQT
Sbjct: 245 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQT 304
Query: 311 VCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQL 370
VCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+++RELAP HIPWS+P +
Sbjct: 305 VCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEA 364
Query: 371 DDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKL 430
+D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EVRH KFF++F K G G +KL
Sbjct: 365 EDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKL 424
Query: 431 KKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKY 490
KKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGINRKVQ+ Y
Sbjct: 425 KKPKQLQEVLDIARQLLMELGQNN-DSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTY 483
Query: 491 QPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXXX 550
P G P+ SS EEED + +EPSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 484 LPHGCPKTSS---EEED-SRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQG 539
Query: 551 XXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 605
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA
Sbjct: 540 DYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 599
Query: 606 NTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNP 664
N NGLLD+DSD+ S Q VKA+LH++LQ+DR FT ED +K+ P + S+ +M +KNP
Sbjct: 600 NMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISLIKSMHLIKNP 659
Query: 665 VQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYD 724
V+ C +++ LI L I+ ++ED K + LYH E+ ELM RRWSK+EKDF KN +YD
Sbjct: 660 VKTCDKVYSLIQSLTSQIRHRMEDPKSSDIQLYHSETLELMLRRWSKLEKDFKTKNGRYD 719
Query: 725 ISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGI 784
ISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+T +EKL I++G
Sbjct: 720 ISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGY 778
Query: 785 CVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVL 844
C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+HSLL++L
Sbjct: 779 CTPLVRKIRSDLQRTQDDDTVNKLH--PVYSRGVLSPERHVRTRLYFTSESHVHSLLSIL 836
Query: 845 RYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904
RYG L DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP KD +S+ERFH+ELHFS
Sbjct: 837 RYGALCNE--SKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFS 894
Query: 905 PGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAEDNT 952
PG C + KNLP G G+RP SR ++ + +ID +D T +D T
Sbjct: 895 PGAKGCEEDKNLPSGYGYRPASRENEGRRSFKIDNDDEPH--TSKKDET 941
|
|
| UNIPROTKB|O43314 PPIP5K2 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 3146 (1112.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 649/1101 (58%), Positives = 788/1101 (71%)
Query: 18 PAFYVGDEGRDKSRHECTDIGYDSDPCCEEG------KQVIVGVCAMAKKSQSKPMKEIL 71
P F+VG E + + + +D EE +Q++VG+C+MAKKS+SKPMKEIL
Sbjct: 5 PRFFVGPEDTEINPGNYRHFFHHADEDDEEEDDSPPERQIVVGICSMAKKSKSKPMKEIL 64
Query: 72 TRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINN 130
R+ F++I ++VF EE I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR PFVIN+
Sbjct: 65 ERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIND 124
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P + L+E EDHVEVNG VF KPF
Sbjct: 125 LNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPF 184
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG 250
VEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTDG
Sbjct: 185 VEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDG 244
Query: 251 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT 310
TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQT
Sbjct: 245 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQT 304
Query: 311 VCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQL 370
VCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+++RELAP HIPWS+P +
Sbjct: 305 VCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEA 364
Query: 371 DDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKL 430
+D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EVRH KFF++F K G G +KL
Sbjct: 365 EDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKL 424
Query: 431 KKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKY 490
KKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGINRKVQ+ Y
Sbjct: 425 KKPKQLQEVLDIARQLLMELGQNN-DSEIEENKPKLEQLKTVLEMYGHFSGINRKVQLTY 483
Query: 491 QPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXXX 550
P G P+ SS EEED + +EPSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 484 LPHGCPKTSS---EEED-SRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQG 539
Query: 551 XXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 605
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA
Sbjct: 540 DYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSA 599
Query: 606 NTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNP 664
N NGLLD+DSD+ S Q VKA+LH++LQ+DR FT ED +K+ P + S+ +M +KNP
Sbjct: 600 NMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISLIKSMHLIKNP 659
Query: 665 VQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYD 724
V+ C +++ LI L I+ ++ED K + LYH E+ ELM RRWSK+EKDF KN +YD
Sbjct: 660 VKTCDKVYSLIQSLTSQIRHRMEDPKSSDIQLYHSETLELMLRRWSKLEKDFKTKNGRYD 719
Query: 725 ISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGI 784
ISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+T +EKL I++G
Sbjct: 720 ISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGY 778
Query: 785 CVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVL 844
C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+HSLL++L
Sbjct: 779 CTPLVRKIRSDLQRTQDDDTVNKLH--PVYSRGVLSPERHVRTRLYFTSESHVHSLLSIL 836
Query: 845 RYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904
RYG L DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP KD +S+ERFH+ELHFS
Sbjct: 837 RYGALCNE--SKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFS 894
Query: 905 PGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAEDNTGSSKSTSDQDS 963
PG C + KNLP G G+RP SR ++ + +ID +D E +T SK + D
Sbjct: 895 PGAKGCEEDKNLPSGYGYRPASRENEGRRPFKIDNDD--------EPHT--SKR-DEVDR 943
Query: 964 PTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHP---YRRPRSPN 1020
P V + P+P + K N P S+ +PEG +
Sbjct: 944 AVILFKPMVSEPI-HIHRKSPLPRSRKTAT--NDEESPL-SVSSPEGTGTWLHYTSGVGT 999
Query: 1021 EEQRSRSYDQQHQRPKGASKCCEGNC---RHRHSISGQMCYLKNSTGYXXXXXXXXXXXX 1077
+R RS +Q P + + +S YL+
Sbjct: 1000 GRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSH 1059
Query: 1078 XXXXXXTAVISGSSSAPNLRN 1098
T+V+ GSSSAPNL++
Sbjct: 1060 CAGLFSTSVLGGSSSAPNLQD 1080
|
|
| MGI|MGI:2142810 Ppip5k2 "diphosphoinositol pentakisphosphate kinase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 3138 (1109.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 616/938 (65%), Positives = 736/938 (78%)
Query: 18 PAFYVGDEGRD-------KSRHECTDIGYDSDPCCEEGKQVIVGVCAMAKKSQSKPMKEI 70
P F+VG E + + H + + D E +Q++VG+C+MAKKS+SKPMKEI
Sbjct: 11 PRFFVGPEDAEINPGNYRRFFHHAEEEEEEEDESPPE-RQIVVGICSMAKKSKSKPMKEI 69
Query: 71 LTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVIN 129
L R+ F++I ++VF EE I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR PFVIN
Sbjct: 70 LERISLFKYITVVVFEEEIILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIN 129
Query: 130 NLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKP 189
+LNMQY IQDRR VY++L+ EGI +PRYA+L+R+ +P + L+E EDHVEVNG VF KP
Sbjct: 130 DLNMQYLIQDRRDVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKP 189
Query: 190 FVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTD 249
FVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTD
Sbjct: 190 FVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTD 249
Query: 250 GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQ 309
GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQ
Sbjct: 250 GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQ 309
Query: 310 TVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQ 369
TVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+++RELAP HIPWS+P +
Sbjct: 310 TVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLE 369
Query: 370 LDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVK 429
+D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EVRH KFF++F K G G +K
Sbjct: 370 AEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLK 429
Query: 430 LKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMK 489
LKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGINRKVQ+
Sbjct: 430 LKKPKQLQEVLDIARQLLMELGQNN-DSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLT 488
Query: 490 YQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXX 549
Y P G P+ SS EEED + +EPSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 489 YLPHGCPKTSS---EEEDN-RREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQ 544
Query: 550 XXXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS 604
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS
Sbjct: 545 GDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS 604
Query: 605 ANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKN 663
AN NGLLD+DSD+ S Q VKA+LH++LQ+DR FT ED +K+ P + S+ +M +KN
Sbjct: 605 ANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKN 664
Query: 664 PVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKY 723
PV+ C +++ LI L I+ ++ED K + LYH E+ ELM RRWSK+EKDF KN +Y
Sbjct: 665 PVKTCDKVYSLIQSLTSQIRYRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRY 724
Query: 724 DISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQG 783
DISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+T +EKL I++G
Sbjct: 725 DISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKG 783
Query: 784 ICVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTV 843
C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+HSLL++
Sbjct: 784 YCTPLVRKIRSDLQRTQDDDTVNKLH--PVYSRGVLSPERHVRTRLYFTSESHVHSLLSI 841
Query: 844 LRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHF 903
LRYG L + DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP KD +S+ERFH+ELHF
Sbjct: 842 LRYGALCDD--SKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHF 899
Query: 904 SPGVNCCVQ-KNLPPGPGFRPHSR-NDQKKNLPRIDQE 939
SPG C + KNLP G G+RP SR N+ +++L D E
Sbjct: 900 SPGAKGCEEDKNLPSGYGYRPASRENEGRRSLKTDDDE 937
|
|
| UNIPROTKB|Q5REW0 PPIP5K2 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 3136 (1109.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 648/1102 (58%), Positives = 788/1102 (71%)
Query: 18 PAFYVGDEGRDKSRHECTDIGYDSDPCCEEG------KQVIVGVCAMAKKSQSKPMKEIL 71
P F+VG E + + + +D EE +Q++VG+C+MAKKS+SKPMKEIL
Sbjct: 5 PRFFVGPEDTEINPGNYRHFFHHADEDDEEEDDSPPERQIVVGICSMAKKSKSKPMKEIL 64
Query: 72 TRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINN 130
R+ F++I ++VF EE I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR PFVIN+
Sbjct: 65 ERVSLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVIND 124
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+ +P + L+E EDHVEVNG VF KPF
Sbjct: 125 LNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPF 184
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG 250
VEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTDG
Sbjct: 185 VEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDG 244
Query: 251 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT 310
TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQT
Sbjct: 245 TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQT 304
Query: 311 VCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQL 370
VCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+++RELAP HIPWS+P +
Sbjct: 305 VCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEA 364
Query: 371 DDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKL 430
+D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EVRH KFF++F K G G +KL
Sbjct: 365 EDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKL 424
Query: 431 KKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHF-SGINRKVQMK 489
KKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHF SGINRKVQ+
Sbjct: 425 KKPKQLQEVLDIARQLLMELGQNN-DSEIEENKPKLEQLKTVLEMYGHFFSGINRKVQLT 483
Query: 490 YQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXX 549
Y P G P+ SS EEED + +EPSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 484 YLPHGCPKTSS---EEED-SRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQ 539
Query: 550 XXXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS 604
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS
Sbjct: 540 GDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS 599
Query: 605 ANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKN 663
AN NGLLD+DSD+ S Q VKA+LH++LQ+DR FT ED +++ P + S+ +M +KN
Sbjct: 600 ANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEELTPSGSVSLIKSMHLIKN 659
Query: 664 PVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKY 723
PV+ C +++ LI L I+ ++ED K + LYH E+ ELM RRWSK+EKDF KN +Y
Sbjct: 660 PVKTCDKVYSLIQSLTSQIRHRMEDPKSSDIQLYHSETLELMLRRWSKLEKDFKAKNGRY 719
Query: 724 DISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQG 783
DISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG+T +EKL I++G
Sbjct: 720 DISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKG 778
Query: 784 ICVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTV 843
C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+HSLL++
Sbjct: 779 YCTPLVRKIRSDLQRTQDDGTVNKLH--PVYSRGVLSPERHVRTRLYFTSESHVHSLLSI 836
Query: 844 LRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHF 903
LRYG L DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP KD +S+ERFH+ELHF
Sbjct: 837 LRYGALCNE--SKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHF 894
Query: 904 SPGVNCCVQ-KNLPPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAEDNTGSSKSTSDQD 962
SPG C + KNLP G G+RP SR ++ + +ID +D E +T SK + D
Sbjct: 895 SPGAKGCEEDKNLPSGYGYRPASRENEGRRPSKIDNDD--------EPHT--SKR-DEVD 943
Query: 963 SPTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNSVGDPCPSIVAPEGHP---YRRPRSP 1019
P V + P+P + K N P S+ +PEG +
Sbjct: 944 RAVILFKPMVSEPI-HIHRKSPLPRSRK--MATNDEESPL-SVSSPEGTGTWLHYTSGVG 999
Query: 1020 NEEQRSRSYDQQHQRPKGASKCCEGNC---RHRHSISGQMCYLKNSTGYXXXXXXXXXXX 1076
+R RS +Q P + + +S YL+
Sbjct: 1000 TGRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGS 1059
Query: 1077 XXXXXXXTAVISGSSSAPNLRN 1098
T+V+ GSSSAPNL++
Sbjct: 1060 HCAGLFSTSVLGGSSSAPNLQD 1081
|
|
| UNIPROTKB|Q5XHF8 ppip5k2 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 3123 (1104.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 618/948 (65%), Positives = 738/948 (77%)
Query: 18 PAFYVG----DEGRDKSRHECTDIGYD--SDPCCEEG--------KQVIVGVCAMAKKSQ 63
P F+VG DE D+S+ E D Y+ D EE +Q++VG+CAMAKKS+
Sbjct: 11 PRFFVGCEESDELLDQSKPENLDNLYEHTEDEEDEEDDEYDSPPERQIVVGICAMAKKSK 70
Query: 64 SKPMKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANL 122
SKPMKEIL RL F++I +++F EE I + V+ WP+ DCLISFHSKGF L+KA+ YA L
Sbjct: 71 SKPMKEILERLSLFKYITVVIFEEEVILNETVENWPLCDCLISFHSKGFLLDKAVAYAKL 130
Query: 123 RKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVN 182
R PFVIN+LN+QY IQDRR+VY +L EGI +PRYAVL+R+ P + L+E EDHVEVN
Sbjct: 131 RNPFVINDLNLQYQIQDRREVYRILTNEGIMLPRYAVLNRDPNKPEECNLIEGEDHVEVN 190
Query: 183 GIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIY 242
G +F KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IY
Sbjct: 191 GEIFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIY 250
Query: 243 EDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRK 302
E+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ K
Sbjct: 251 EEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWK 310
Query: 303 VCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHI 362
VCLAFKQTVCGFDLLRA+G+S+VCDVNGFSFVKNS KYYDD AKILGN+I+RELAP HI
Sbjct: 311 VCLAFKQTVCGFDLLRASGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIIMRELAPVFHI 370
Query: 363 PWSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGG 422
PWS+P + +D P VPTT G MELRCV+AVIRHGDRTPKQKMK+EVRH +FF++F KY G
Sbjct: 371 PWSIPLEAEDIPIVPTTSGTKMELRCVIAVIRHGDRTPKQKMKMEVRHQRFFDLFEKYHG 430
Query: 423 QNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGI 482
G +KLKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGI
Sbjct: 431 YKTGKIKLKKPKQLQEVLDIARQLLVELGQNN-DSEIEESKAKLEQLKTVLEMYGHFSGI 489
Query: 483 NRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFR 542
NRKVQ+ Y P G P+ SS EEED C+ +EPSL+L+LKWGGELTPAGR+QAEELGR FR
Sbjct: 490 NRKVQLTYLPHGCPKTSS---EEED-CRREEPSLLLVLKWGGELTPAGRVQAEELGRAFR 545
Query: 543 CMYPXXXXXXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPI 597
CMYP HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPI
Sbjct: 546 CMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPI 605
Query: 598 LVQMVKSANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINI 656
LVQMVKSAN NGLLD+DSD+ S Q+ VKA+LH++LQRDR F+ ED +K++P + S
Sbjct: 606 LVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHEILQRDRDFSSEDFEKLSPTGSVSQIK 665
Query: 657 AMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDF 716
+M F+KNPV+ C +++ LI L I++++ED K + LYH E+ ELM RRWSK+EKDF
Sbjct: 666 SMHFIKNPVKTCDKVYSLIQSLTSQIRQRMEDPKFADIQLYHSETLELMLRRWSKLEKDF 725
Query: 717 CMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSE 776
KN +YDISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG++ E
Sbjct: 726 KTKNGRYDISKIPDIYDCIKYDVQHNC-SLKLENTMELYRLSKALADIVIPQEYGISRPE 784
Query: 777 KLTISQGICVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESH 836
KL I++G C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH
Sbjct: 785 KLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLH--PLYSRGVMSPERHVRTRLYFTSESH 842
Query: 837 IHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDER 896
+HSLL++LR+G L + DEQW RAM+Y+++VSELNYM+Q+VIMLYEDP KD +S+ER
Sbjct: 843 VHSLLSILRFGALCDET--KDEQWKRAMDYLNVVSELNYMTQIVIMLYEDPNKDVSSEER 900
Query: 897 FHIELHFSPGVNCCVQ-KNLPPGPGFRPHSR-NDQKKNLPRIDQEDTE 942
FH+ELHFSPG C + KNLP G G+RP S+ N+ K + D +
Sbjct: 901 FHVELHFSPGAKGCEEDKNLPSGFGYRPASQENESSKKHTHANDSDED 948
|
|
| ZFIN|ZDB-GENE-091204-125 si:dkey-117i20.1 "si:dkey-117i20.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 3116 (1101.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 609/936 (65%), Positives = 731/936 (78%)
Query: 25 EGRDKSRHECTDIGYDSDPCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIV 84
E ++ E D YDS P +Q++VG+CAM+KKS+SKPMKEIL RL F++I ++
Sbjct: 38 ENVEEEDEERDDAEYDSPP----ERQIVVGICAMSKKSKSKPMKEILERLSLFKYITVVT 93
Query: 85 FSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKV 143
F EE I + V+ WP+ DCLISFHSKGFPL+KA+ Y LR PFVIN+L++QY IQDRR+V
Sbjct: 94 FEEEVILNETVENWPLCDCLISFHSKGFPLDKAVAYEKLRNPFVINDLDLQYYIQDRREV 153
Query: 144 YALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIY 203
Y +L+ EGI++PR+AVL+R+ P + LVE EDHVEVNG +F KPFVEKPVSAEDHN+Y
Sbjct: 154 YRILKDEGIQLPRFAVLNRDPARPEECNLVEGEDHVEVNGEIFQKPFVEKPVSAEDHNVY 213
Query: 204 IYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYA 263
IYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYA
Sbjct: 214 IYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYA 273
Query: 264 HAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKS 323
HAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCLAFKQTVCGFDLLRANG+S
Sbjct: 274 HAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQS 333
Query: 324 FVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKM 383
+VCDVNGFSFVKNS KYYDD AKILGN+I+RELAP IPWS+P + +D P VPTT G M
Sbjct: 334 YVCDVNGFSFVKNSMKYYDDCAKILGNIIMRELAPQFQIPWSIPLEAEDIPIVPTTSGTM 393
Query: 384 MELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIA 443
MELRCV+AVIRHGDRTPKQKMK+EVRH +FF++F K G G +KLKKPKQLQEVLDIA
Sbjct: 394 MELRCVIAVIRHGDRTPKQKMKMEVRHQRFFDLFEKCEGYKSGKLKLKKPKQLQEVLDIA 453
Query: 444 RMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDE 503
R LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGINRKVQ+ Y P G P+ SS
Sbjct: 454 RQLLVELGQNN-DSEIEESKAKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSS--- 509
Query: 504 EEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPXXXXXXXXX-----XXX 558
EEEDV + +PSL+L+LKWGGELTPAGR+QAEELGR FRCMYP
Sbjct: 510 EEEDV-RRDDPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRL 568
Query: 559 HSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDA- 617
HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSAN NGLLD+DSD+
Sbjct: 569 HSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSL 628
Query: 618 SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHV 677
S Q VKA+LH++LQ+DR F ED +K+ P ++TS+ +M +KNPV+ C +++ LI
Sbjct: 629 SSCQQKVKARLHEILQKDRDFAAEDYEKLAPTSSTSLVKSMQMIKNPVKTCDKVYSLIQN 688
Query: 678 LQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKY 737
L I++++E+ K + LYH E+ ELM RRWSK+EKDF MKN +Y+ISKIPDIYDCIKY
Sbjct: 689 LTLQIRQRMEEPKSADIQLYHSETLELMLRRWSKLEKDFKMKNGRYNISKIPDIYDCIKY 748
Query: 738 DLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQ 797
D+QHN +++ D E+Y +K +ADIVIPQEYG++ +EKL I++G C PL++KIR+DLQ
Sbjct: 749 DVQHNS-SLKLDNTMEIYRLSKALADIVIPQEYGISQAEKLDIAKGYCTPLIRKIRSDLQ 807
Query: 798 XXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMND 857
P YS GV SP RHVRTRLYFTSESH+HSLL++LRYG L + D
Sbjct: 808 RTQDDDTVNKLH--PVYSRGVMSPERHVRTRLYFTSESHVHSLLSILRYGALCDEA--KD 863
Query: 858 EQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQ-KNLP 916
+QW RAM+Y+ +VSELNYM+Q+VIMLYEDP KDP+S++RFH+ELHFSPG C + KNLP
Sbjct: 864 DQWKRAMDYLKIVSELNYMTQIVIMLYEDPNKDPSSEDRFHVELHFSPGAKGCEEDKNLP 923
Query: 917 PGPGFRPHSRNDQ--KKNLPRIDQEDTEFYSTDAED 950
G G+RP SR ++ KK E+ D D
Sbjct: 924 SGFGYRPASRENEGPKKKSNNDSDEEASGAKRDEPD 959
|
|
| UNIPROTKB|F1NCX0 PPIP5K2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 3115 (1101.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 617/960 (64%), Positives = 741/960 (77%)
Query: 7 EHGYQGLRFSKPAFYVGDEGRDKSRHECTDIGYDSDPCCEEGKQVIVGVCAMAKKSQSKP 66
E G + L ++P Y + D E + YDS P +Q+ VG+C+MAKKS+SKP
Sbjct: 21 EDGEELLDSARPTDY--EHFYDHGEEEEEE--YDSPP----ERQIAVGICSMAKKSKSKP 72
Query: 67 MKEILTRLEEFEFIKMIVFSEETI-QKPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKP 125
MKEIL RL F++I +++F E+ I +PV+ WP+ DCLISFHSKGFPL+KA+ YA LR P
Sbjct: 73 MKEILERLSMFKYITVVIFEEDVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNP 132
Query: 126 FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIV 185
F+IN+LNMQY IQDRR+VY +L+ EGI +PRYAVL+R+ +P + L+E EDHVEVNG +
Sbjct: 133 FIINDLNMQYHIQDRREVYGILKAEGILLPRYAVLNRDPNNPQECNLIEGEDHVEVNGEI 192
Query: 186 FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDF 245
F KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGSRSSVYSPES VRK+GS+IYE+F
Sbjct: 193 FQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEF 252
Query: 246 MPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCL 305
MPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE+RYPVIL+ EKLI+ KVCL
Sbjct: 253 MPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCL 312
Query: 306 AFK--QTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIP 363
AFK QTVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD AKILGN+I+RELAP IP
Sbjct: 313 AFKKQQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIIMRELAPQFQIP 372
Query: 364 WSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQ 423
WS+P + +D P VPTT G MMELRCV+AVIRHGDRTPKQKMK+EV+H KFF++F K G
Sbjct: 373 WSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVKHQKFFDLFEKCDGY 432
Query: 424 NDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGIN 483
G +KLKKPKQLQEVLDIAR LL E+ N+ D EIEE + KLEQLK VLEMYGHFSGIN
Sbjct: 433 KSGKLKLKKPKQLQEVLDIARQLLVELGQNN-DSEIEESKAKLEQLKTVLEMYGHFSGIN 491
Query: 484 RKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRC 543
RKVQ+ Y P G P+ SS EEE++ + EPSL+L+LKWGGELTPAGR+QAEELGR FRC
Sbjct: 492 RKVQLTYLPHGCPKTSS--EEEDN--RRNEPSLLLVLKWGGELTPAGRVQAEELGRAFRC 547
Query: 544 MYPXXXXXXXXX-----XXXHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPIL 598
MYP HST+RHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPIL
Sbjct: 548 MYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPIL 607
Query: 599 VQMVKSANTNGLLDNDSDA-SKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIA 657
VQMVKSAN NGLLD+DSD+ S Q+ VKA+LH++LQRDR FT +D DK+ P + S+ +
Sbjct: 608 VQMVKSANMNGLLDSDSDSLSSCQHRVKARLHEILQRDREFTADDYDKLTPSGSISLIKS 667
Query: 658 MDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFC 717
M +KNPV+ C +++ LI L I++K+E+ K + LYH E+ ELM RRW+K+EKDF
Sbjct: 668 MQVIKNPVKTCDKVYSLIQSLTSQIRQKMEEPKSADIQLYHSETLELMLRRWAKLEKDFK 727
Query: 718 MKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEK 777
KN +YDISKIPDIYDCIKYD+QHN +++ + ELY +K +ADIVIPQEYG++ +EK
Sbjct: 728 TKNGRYDISKIPDIYDCIKYDVQHNG-SLKLENTMELYRLSKALADIVIPQEYGISKAEK 786
Query: 778 LTISQGICVPLLKKIRADLQXXXXXXXXXXXXXXPQYSHGVSSPGRHVRTRLYFTSESHI 837
L I++G C PL++KIR+DLQ P YS GV SP RHVRTRLYFTSESH+
Sbjct: 787 LEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLH--PLYSRGVMSPERHVRTRLYFTSESHV 844
Query: 838 HSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERF 897
HSLL+ LRYG L + DEQW RAM+Y+++V+ELNYM+Q+VIMLYEDP K+ +S+ERF
Sbjct: 845 HSLLSTLRYGALCDET--KDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKELSSEERF 902
Query: 898 HIELHFSPGVNCCVQ-KNLPPGPGFRPHSR-NDQKKNLPRIDQEDTEFYSTDAEDNTGSS 955
H+ELHFSPG C + KNLP G G+RP SR N+ K + D E + T D T S
Sbjct: 903 HVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGSKKTSHRNDSDEEAH-TSKRDETDRS 961
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6ZQB6 | VIP2_MOUSE | 2, ., 7, ., 4, ., 2, 4 | 0.6447 | 0.7440 | 0.8343 | yes | N/A |
| P0C644 | VIP1_RAT | 2, ., 7, ., 4, ., 2, 4 | 0.6629 | 0.6919 | 0.6108 | yes | N/A |
| O74429 | VIP1_SCHPO | 2, ., 7, ., 4, ., 2, 4 | 0.3386 | 0.6026 | 0.8293 | yes | N/A |
| O43314 | VIP2_HUMAN | 2, ., 7, ., 4, ., 2, 4 | 0.5743 | 0.8333 | 0.8487 | yes | N/A |
| Q9VR59 | VIP1_DROME | 2, ., 7, ., 4, ., 2, 4 | 0.6815 | 0.8957 | 0.6686 | yes | N/A |
| Q5RDF1 | VIP1_PONAB | 2, ., 7, ., 4, ., 2, 4 | 0.6445 | 0.6729 | 0.6046 | yes | N/A |
| P91309 | VIP1_CAEEL | 2, ., 7, ., 4, ., 2, 4 | 0.5542 | 0.6666 | 0.6379 | yes | N/A |
| Q5REW0 | VIP2_PONAB | 2, ., 7, ., 4, ., 2, 4 | 0.5729 | 0.8333 | 0.8480 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1266 | |||
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 6e-39 | |
| cd07061 | 242 | cd07061, HP_HAP_like, Histidine phosphatase domain | 8e-18 | |
| cd07040 | 153 | cd07040, HP, Histidine phosphatase domain found in | 4e-09 | |
| cd07061 | 242 | cd07061, HP_HAP_like, Histidine phosphatase domain | 1e-06 | |
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 3e-06 | |
| cd07067 | 153 | cd07067, HP_PGM_like, Histidine phosphatase domain | 6e-04 |
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 6e-39
Identities = 79/392 (20%), Positives = 124/392 (31%), Gaps = 104/392 (26%)
Query: 513 EPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASD 572
+ L WG LTP GR QA ELGR R Y G LL ++ I +SD
Sbjct: 40 LNKVQWPLGWGQ-LTPRGRAQAFELGRYLRQRYVG-------LLPDGYP-PSEVYIRSSD 90
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
R +A AF GL EG D D+D Q I L ++
Sbjct: 91 SNRTLASAQAFLAGLFPPEG-------------------DIDNDLLDWQPIPVVTLPEVK 131
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
+ D C A D + + +L+ V I K+L +
Sbjct: 132 KALANLLLLGYD---SCP------AFDESLVEKRVDPELAKLLAVYLEPIAKRLSQLLPG 182
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
E++L W+ ++ N D S PD++ YD H + E
Sbjct: 183 ETNL-------TGLDVWALLDLCLFETN-ASDNSPFPDLFTG--YDALHLE---YLSDLE 229
Query: 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNP 812
E Y + I + LLK++ L +
Sbjct: 230 EYYGLSGI------------GPELAKLIGGPLLNELLKRLTNALVPDQT----------- 266
Query: 813 QYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSE 872
++ LYF ++ I LL+ L GL + +
Sbjct: 267 ---------RLDLKLYLYFAHDTTIAPLLSAL---GLFDQLPGLSSGE------------ 302
Query: 873 LNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904
Y +++V L++D + F++ L ++
Sbjct: 303 PPYAARLVFELWQD-------GKEFYVRLLYN 327
|
The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Length = 327 |
| >gnl|CDD|132717 cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 8e-18
Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
GELTP GR QA ELGR FR Y LL LHS R DL I +SD R +A AF
Sbjct: 17 GELTPFGRQQAFELGRYFRQRYGE-------LLLLHSYNRSDLYIRSSDSQRTLQSAQAF 69
Query: 584 AKGLLALEG-ELTPILVQMVKSANTNGLLD 612
GL +G + + + + + L D
Sbjct: 70 LAGLFPPDGWQPIAVHTIPEEEDDVSNLFD 99
|
Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord. Length = 242 |
| >gnl|CDD|132716 cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 4e-09
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 17/66 (25%)
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
G LT GR QA ELG+ R Y +IY+S R TA
Sbjct: 22 GDGPLTEKGRQQARELGKALRERYI-----------------KFDRIYSSPLKRAIQTAE 64
Query: 582 AFAKGL 587
+GL
Sbjct: 65 IILEGL 70
|
Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system; phytases scavenge phosphate from extracellular sources. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Clinical applications include the use of prostatic acid phosphatase (PAP) as a serum marker for prostate cancer. Agricultural applications include the addition of phytases to animal feed. Length = 153 |
| >gnl|CDD|132717 cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 34/182 (18%)
Query: 724 DISKIPDIYDCIKYDLQHNQHTVQFDQ---AEELYLNAKYMADIVIPQEYGMTMSEKLTI 780
+ + +++D Y+ ++ F EE + YG L
Sbjct: 90 EEDDVSNLFDLCAYETVAKGYSAPFCDLFTEEEWVKLEYLN---DLKFYYGYGPGNPLAR 146
Query: 781 SQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSL 840
+QG PLL ++ + RL +G S R + SH ++
Sbjct: 147 AQGS--PLLNEL--------------LARLT----NGPSGSQTFPLDRKLYLYFSHDTTI 186
Query: 841 LTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDP--TKDPTSDERFH 898
L +L GL + ++R SE +Y +++E D S R
Sbjct: 187 LPLLTALGLFDFAEPLPPDFLRG------FSESDYPPFAARLVFELWRCPGDGESYVRVL 240
Query: 899 IE 900
+
Sbjct: 241 VN 242
|
Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord. Length = 242 |
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 3e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 385 ELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQND 425
EL V V RHGDRTP + + + F + K+ +
Sbjct: 1 ELEFVQVVSRHGDRTPTKSLPKDPEAWPFKLLSEKHNDFLN 41
|
The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Length = 327 |
| >gnl|CDD|132718 cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 17/74 (22%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
LT GR QA LG+ RL +IY+S R TA
Sbjct: 25 PLTEKGREQARALGK-----------------RLKELGIKFDRIYSSPLKRAIQTAEIIL 67
Query: 585 KGLLALEGELTPIL 598
+ L L E+ P L
Sbjct: 68 EELPGLPVEVDPRL 81
|
Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Length = 153 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1266 | |||
| KOG1057|consensus | 1018 | 100.0 | ||
| COG0189 | 318 | RimK Glutathione synthase/Ribosomal protein S6 mod | 99.94 | |
| PF08443 | 190 | RimK: RimK-like ATP-grasp domain; InterPro: IPR013 | 99.92 | |
| PF00328 | 347 | His_Phos_2: Histidine phosphatase superfamily (bra | 99.92 | |
| PRK10446 | 300 | ribosomal protein S6 modification protein; Provisi | 99.89 | |
| TIGR00768 | 277 | rimK_fam alpha-L-glutamate ligases, RimK family. T | 99.87 | |
| KOG1057|consensus | 1018 | 99.86 | ||
| PLN02941 | 328 | inositol-tetrakisphosphate 1-kinase | 99.86 | |
| TIGR02144 | 280 | LysX_arch Lysine biosynthesis enzyme LysX. The fam | 99.86 | |
| PRK05246 | 316 | glutathione synthetase; Provisional | 99.84 | |
| TIGR01380 | 312 | glut_syn glutathione synthetase, prokaryotic. This | 99.83 | |
| PRK12458 | 338 | glutathione synthetase; Provisional | 99.81 | |
| TIGR02291 | 317 | rimK_rel_E_lig alpha-L-glutamate ligase-related pr | 99.69 | |
| cd07061 | 242 | HP_HAP_like Histidine phosphatase domain found in | 99.68 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.65 | |
| PRK01372 | 304 | ddl D-alanine--D-alanine ligase; Reviewed | 99.61 | |
| TIGR02068 | 864 | cya_phycin_syn cyanophycin synthetase. Cyanophycin | 99.57 | |
| PRK14016 | 727 | cyanophycin synthetase; Provisional | 99.54 | |
| PRK02471 | 752 | bifunctional glutamate--cysteine ligase/glutathion | 99.49 | |
| TIGR01205 | 315 | D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a | 99.42 | |
| PRK14571 | 299 | D-alanyl-alanine synthetase A; Provisional | 99.35 | |
| TIGR01435 | 737 | glu_cys_lig_rel glutamate--cysteine ligase/gamma-g | 99.33 | |
| PF02955 | 173 | GSH-S_ATP: Prokaryotic glutathione synthetase, ATP | 99.32 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 99.27 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 99.24 | |
| PRK14569 | 296 | D-alanyl-alanine synthetase A; Provisional | 99.21 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 99.13 | |
| PRK01966 | 333 | ddl D-alanyl-alanine synthetase A; Reviewed | 99.12 | |
| PRK14572 | 347 | D-alanyl-alanine synthetase A; Provisional | 99.12 | |
| PRK14568 | 343 | vanB D-alanine--D-lactate ligase; Provisional | 99.09 | |
| PRK13790 | 379 | phosphoribosylamine--glycine ligase; Provisional | 99.04 | |
| PRK14570 | 364 | D-alanyl-alanine synthetase A; Provisional | 98.97 | |
| PF13535 | 184 | ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A | 98.92 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 98.88 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 98.87 | |
| PRK07206 | 416 | hypothetical protein; Provisional | 98.84 | |
| PF05770 | 307 | Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- | 98.83 | |
| PRK00885 | 420 | phosphoribosylamine--glycine ligase; Provisional | 98.83 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 98.79 | |
| PF02655 | 161 | ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 | 98.77 | |
| PRK02186 | 887 | argininosuccinate lyase; Provisional | 98.76 | |
| PRK08463 | 478 | acetyl-CoA carboxylase subunit A; Validated | 98.74 | |
| TIGR01369 | 1050 | CPSaseII_lrg carbamoyl-phosphate synthase, large s | 98.73 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 98.71 | |
| PRK05586 | 447 | biotin carboxylase; Validated | 98.71 | |
| PF14397 | 285 | ATPgrasp_ST: Sugar-transfer associated ATP-grasp | 98.7 | |
| PRK08462 | 445 | biotin carboxylase; Validated | 98.7 | |
| PRK07178 | 472 | pyruvate carboxylase subunit A; Validated | 98.69 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.64 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 98.64 | |
| PRK08654 | 499 | pyruvate carboxylase subunit A; Validated | 98.63 | |
| TIGR00514 | 449 | accC acetyl-CoA carboxylase, biotin carboxylase su | 98.57 | |
| PRK06111 | 450 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.57 | |
| PF15632 | 329 | ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa | 98.49 | |
| PLN02257 | 434 | phosphoribosylamine--glycine ligase | 98.47 | |
| PRK06395 | 435 | phosphoribosylamine--glycine ligase; Provisional | 98.46 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 98.45 | |
| TIGR01235 | 1143 | pyruv_carbox pyruvate carboxylase. This enzyme pla | 98.43 | |
| PRK12833 | 467 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.4 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 98.34 | |
| PRK14573 | 809 | bifunctional D-alanyl-alanine synthetase A/UDP-N-a | 98.33 | |
| PRK12999 | 1146 | pyruvate carboxylase; Reviewed | 98.32 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 98.31 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 98.31 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 98.31 | |
| COG1821 | 307 | Predicted ATP-utilizing enzyme (ATP-grasp superfam | 98.3 | |
| COG1181 | 317 | DdlA D-alanine-D-alanine ligase and related ATP-gr | 98.25 | |
| PF07478 | 203 | Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In | 98.23 | |
| PRK13789 | 426 | phosphoribosylamine--glycine ligase; Provisional | 98.21 | |
| PF02750 | 203 | Synapsin_C: Synapsin, ATP binding domain; InterPro | 98.14 | |
| TIGR01369 | 1050 | CPSaseII_lrg carbamoyl-phosphate synthase, large s | 98.13 | |
| PRK06524 | 493 | biotin carboxylase-like protein; Validated | 98.09 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 98.03 | |
| KOG3720|consensus | 411 | 98.02 | ||
| TIGR02712 | 1201 | urea_carbox urea carboxylase. Members of this fami | 98.02 | |
| PF14398 | 262 | ATPgrasp_YheCD: YheC/D like ATP-grasp | 98.01 | |
| PRK05784 | 486 | phosphoribosylamine--glycine ligase; Provisional | 97.78 | |
| PRK10173 | 413 | glucose-1-phosphatase/inositol phosphatase; Provis | 97.7 | |
| PRK13278 | 358 | purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D | 97.51 | |
| COG0439 | 449 | AccC Biotin carboxylase [Lipid metabolism] | 97.36 | |
| cd07040 | 153 | HP Histidine phosphatase domain found in a functio | 97.34 | |
| COG2232 | 389 | Predicted ATP-dependent carboligase related to bio | 97.12 | |
| PRK13277 | 366 | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo | 96.87 | |
| PF02786 | 211 | CPSase_L_D2: Carbamoyl-phosphate synthase L chain, | 96.81 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 96.34 | |
| COG0458 | 400 | CarB Carbamoylphosphate synthase large subunit (sp | 96.1 | |
| KOG3895|consensus | 488 | 95.8 | ||
| PRK10172 | 436 | phosphoanhydride phosphorylase; Provisional | 95.76 | |
| TIGR03162 | 177 | ribazole_cobC alpha-ribazole phosphatase. Members | 95.71 | |
| KOG3672|consensus | 487 | 95.55 | ||
| PF00300 | 158 | His_Phos_1: Histidine phosphatase superfamily (bra | 95.46 | |
| COG0406 | 208 | phoE Broad specificity phosphatase PhoE and relate | 95.24 | |
| PRK03482 | 215 | phosphoglycerate mutase; Provisional | 95.12 | |
| cd07067 | 153 | HP_PGM_like Histidine phosphatase domain found in | 95.08 | |
| PTZ00123 | 236 | phosphoglycerate mutase like-protein; Provisional | 94.88 | |
| PTZ00122 | 299 | phosphoglycerate mutase; Provisional | 94.65 | |
| TIGR03848 | 204 | MSMEG_4193 probable phosphomutase, MSMEG_4193 fami | 94.48 | |
| PRK14115 | 247 | gpmA phosphoglyceromutase; Provisional | 94.31 | |
| PRK13463 | 203 | phosphatase PhoE; Provisional | 94.17 | |
| PRK13462 | 203 | acid phosphatase; Provisional | 94.11 | |
| PRK15004 | 199 | alpha-ribazole phosphatase; Provisional | 94.06 | |
| ), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071 | 194 | GARS_A: Phosphoribosylglycinamide synthetase, ATP- | 93.96 | |
| PRK15416 | 201 | lipopolysaccharide core heptose(II)-phosphate phos | 93.88 | |
| PRK14118 | 227 | gpmA phosphoglyceromutase; Provisional | 93.73 | |
| PRK14116 | 228 | gpmA phosphoglyceromutase; Provisional | 93.69 | |
| TIGR00249 | 152 | sixA phosphohistidine phosphatase SixA. | 93.54 | |
| TIGR01258 | 245 | pgm_1 phosphoglycerate mutase, BPG-dependent, fami | 93.52 | |
| PRK01295 | 206 | phosphoglyceromutase; Provisional | 93.46 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 93.42 | |
| PF14305 | 239 | ATPgrasp_TupA: TupA-like ATPgrasp | 93.4 | |
| PRK01112 | 228 | phosphoglyceromutase; Provisional | 93.24 | |
| smart00855 | 155 | PGAM Phosphoglycerate mutase family. Phosphoglycer | 93.0 | |
| PRK07238 | 372 | bifunctional RNase H/acid phosphatase; Provisional | 92.36 | |
| PRK10848 | 159 | phosphohistidine phosphatase; Provisional | 92.28 | |
| PRK14119 | 228 | gpmA phosphoglyceromutase; Provisional | 92.27 | |
| KOG1382|consensus | 467 | 92.01 | ||
| PRK14117 | 230 | gpmA phosphoglyceromutase; Provisional | 91.7 | |
| PRK14120 | 249 | gpmA phosphoglyceromutase; Provisional | 91.7 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 90.72 | |
| PF02222 | 172 | ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T | 89.26 | |
| COG2062 | 163 | SixA Phosphohistidine phosphatase SixA [Signal tra | 88.6 | |
| KOG0235|consensus | 214 | 86.61 | ||
| PRK06193 | 206 | hypothetical protein; Provisional | 86.36 | |
| COG0151 | 428 | PurD Phosphoribosylamine-glycine ligase [Nucleotid | 83.02 | |
| PF03133 | 292 | TTL: Tubulin-tyrosine ligase family; InterPro: IPR | 80.46 |
| >KOG1057|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-294 Score=2491.38 Aligned_cols=821 Identities=66% Similarity=1.052 Sum_probs=780.5
Q ss_pred CCCCCcCCCCeEEEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccc-cccccccccceeeccccCCCcHHHHHH
Q psy10158 40 DSDPCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCLISFHSKGFPLEKAIK 118 (1266)
Q Consensus 40 ~~~~~~~~~~~i~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP~cD~LIsFfS~GfPL~KAi~ 118 (1266)
++.+.....++|+||||||++|++||||++||+||+.|++|++|||+|+||| |||||||.|||||||||+||||+||++
T Consensus 30 ~e~~~~p~~r~i~vGICaM~kK~~SKPm~~il~rli~f~~~~~vvf~e~viL~EpVENWP~CdcLIsFhSsGFPLdKAia 109 (1018)
T KOG1057|consen 30 EEEDDSPPERQIVVGICAMAKKSKSKPMKEILERLILFKYITVVVFEEEVILREPVENWPLCDCLISFHSKGFPLDKAVA 109 (1018)
T ss_pred cccccCCCccceEEEEeechhhhccChHHHHHHHHHhcceeEEEEeccceeeccccccCcccceEEEeccCCCChHHHHH
Confidence 4455666678999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEeccccc
Q psy10158 119 YANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAE 198 (1266)
Q Consensus 119 Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~Ge 198 (1266)
|++|||||+||||.||+++||||+||+||++.|||+|++.+++|+++++..++++|++|+|+|||++|.||||||||+||
T Consensus 110 Y~kLRnPFviNdL~mQyll~DRR~Vy~iLe~~gI~~PRya~~nr~~pn~~~~~lie~eD~vEVnGevf~KPFVEKPVs~E 189 (1018)
T KOG1057|consen 110 YAKLRNPFVINDLDMQYLLQDRREVYSILEAEGIPLPRYAILNRDPPNPKLCNLIEGEDHVEVNGEVFQKPFVEKPVSAE 189 (1018)
T ss_pred HHHhcCCeeeccccHHHHHHHHHHHHHHHHHcCCCCceeEeecCCCCChHHhhhhcCCCeEEEcceeccCCcccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCcee
Q psy10158 199 DHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVE 278 (1266)
Q Consensus 199 dHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VR 278 (1266)
|||||||||+|+|||+|+||||||||||+|+|++.+|++|||||||||+|||||||||||||+|||||+||||||||+|+
T Consensus 190 DHNIYIYYPsSaGGGsqrLFRKIgnRSS~y~P~~~vRkeGSyIYEeFMptdgtDVKvYTVGp~YaHAEaRKSPvvDGkV~ 269 (1018)
T KOG1057|consen 190 DHNIYIYYPSSAGGGSQRLFRKIGNRSSEYHPDSSVRKEGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPVVDGKVE 269 (1018)
T ss_pred cccEEEEecCCCCccHHHHHHHhcccccccCCccccccccceehhhhcCCCCccceEEeeCcchhhhhhccCccccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceeeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeCCCeEEEeecCceecccCchhhHHHHHHHHHHHH--Hhh
Q psy10158 279 RDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMIL--REL 356 (1266)
Q Consensus 279 RN~hgKEiRypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNGwSFVK~n~kYYDdcA~ILr~~~l--~~l 356 (1266)
||+||||+||||+||++||+||+|||.||+|+||||||||++|+|||||||||||||||+|||||||+||++|++ +++
T Consensus 270 Rns~GKEvRYpv~Ls~~EK~iA~KVciAF~Q~VCGFDLLRa~G~SYVcDVNGfSFVKns~kYYDd~AkIL~~~~~~ak~~ 349 (1018)
T KOG1057|consen 270 RNSDGKEVRYPVILNSSEKQIARKVCIAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDDCAKILGKMNLSARAL 349 (1018)
T ss_pred ecCCCceeeceeecChhhHHHHhHHHhhccccccchHHhhcCCceEEEeccceeeeecchhhhHHHHHHHhhhhhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997776 556
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCcCcceeeeceEEEEEcCCCCcccceeEEeechhHHHHHHhhCCCCCCcccccChH
Q psy10158 357 APTLHIPWSVPFQLDD--PPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPK 434 (1266)
Q Consensus 357 ~p~~~ip~~~p~~~~~--~p~~p~t~~~~~eLr~VVaViRHgDRTPKQKlK~~v~~~~Fi~Ll~~~~g~k~~evkLK~~~ 434 (1266)
+|..++||++|...++ +|++++++|+++|||||||||||||||||||||++|++++||+||++|+|++++|+|||++.
T Consensus 350 ~~~~~iP~~~p~~~~~~~~~~v~~~~g~~~elrcviaViRHgDRTPKQK~K~~vt~~~f~~L~ek~~G~~~~e~klk~~~ 429 (1018)
T KOG1057|consen 350 APASQIPWSLPGIRNEKVEPWVPTSSGGMMELRCVIAVIRHGDRTPKQKMKLSVTSPKFLGLFEKYDGYKKEETKLKSAN 429 (1018)
T ss_pred CccccCCCCCcccccCCCCCceecCCCccceeeeeEEEEecCCCCccceeeEEeccHHHHHHHHhhCCccccceeeCCHH
Confidence 7888999999998887 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhCCCChhhHHhHHHHHHHHHHHHhcCCCCCCcceEEeeecCCCCCCCCCCCccccccCCCCCC
Q psy10158 435 QLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEP 514 (1266)
Q Consensus 435 qLqevLd~~r~ll~~~~~~~~~~e~eE~~~KL~qLk~VLe~~g~fsGINrKVQLKp~~~~~p~~~~~~~~~~~v~~~~e~ 514 (1266)
|||+|||++|.|+.+.+.. +..++|| ..||+|||+|||||||||||||||||||++|+.++.+ +++ . ..++
T Consensus 430 QLq~vLd~ar~ll~e~~~~-~~~die~-~~KleQlk~vLE~~ghFsGinrKVQlk~l~~~~~k~s--e~e---~--~r~~ 500 (1018)
T KOG1057|consen 430 QLQEVLDAARLLLEEKEDK-DAEDIEE-AKKLEQLKNVLEMYGHFSGINRKVQLKPLKWVYVKKS--EGE---L--EREP 500 (1018)
T ss_pred HHHHHHHHHHhhhcccccC-cccchhh-HHHHHHHHHHHHhhCCCCCccceeeeeeccccCCCCC--ccc---c--ccCc
Confidence 9999999999999887654 3445554 7899999999999999999999999999999988765 221 1 2246
Q ss_pred eEEEEEecCCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccCCc
Q psy10158 515 SLVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGEL 594 (1266)
Q Consensus 515 kllLIlKWGGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEgeL 594 (1266)
+++||||||||||||||+|||||||+|||||||| ||+|||||||||||||||||||||||||||||||||||+|||+|
T Consensus 501 ~llliLKwGGelT~agr~QAeeLGr~FR~~~~gg--~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL~lEgel 578 (1018)
T KOG1057|consen 501 QLLLILKWGGELTHAGRYQAEELGRQFRCDYPGG--QGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGEL 578 (1018)
T ss_pred ceeEEeeeCCEecchhHhhHHHHHHHHHhcCCCC--CCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHHhhccCC
Confidence 7999999999999999999999999999999998 59999999999999999999999999999999999999999999
Q ss_pred CceeeeeecccccCCCCCCCCcchHHHHHHHHHHHHHHhcCCCCChhc-ccccCCCCcccHHHHHhhcCCHHHHHHHHHH
Q psy10158 595 TPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPED-RDKVNPCNATSINIAMDFVKNPVQCCKRIHE 673 (1266)
Q Consensus 595 tPIlVslVk~~~~~~LLDds~~a~~~md~vKk~L~~lL~~~~~~~~e~-~~~l~p~~~~s~~~al~~i~nP~~~~~~v~~ 673 (1266)
||||||||+++|+ |||++++|+++|++||++||+|||.|++|++++ +..++|.+..++.++|.+|+||+++|++++.
T Consensus 579 TpiLvqmVkkdn~--LLD~~~~as~~m~~vK~~L~~ilq~~~~~~~e~~~~~~~P~~~~~l~~~ve~vk~~~k~~~e~~~ 656 (1018)
T KOG1057|consen 579 TPILVQMVKKDNT--LLDDDNAASSYMDKVKARLHEILQAGREFTPEFDWPELMPNPSEVLTQVVELVKNPVKVCDENFA 656 (1018)
T ss_pred cHHHHHHHHhcch--hhcCcchhHHHHHHHHHHHHHHHhcCCcCCCccchhhcCCcHhHHHHHHHHHHHhHHHHHHHhhh
Confidence 9999999998766 999999999999999999999999999999995 8888999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCcccccCcC-CCCCCHHHHHHHHHHHHHHhhcccCcccCCCCCcchhhhhhhhhcCccccCcccHH
Q psy10158 674 LIHVLQHIIQKKLEDVKCKESSL-YHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752 (1266)
Q Consensus 674 l~~~l~~~~~~~~~d~~~~~~~~-c~gE~~~L~~eRW~KL~~dF~~~~k~fD~SKIpDiYD~iKYD~lHNr~fL~~~~l~ 752 (1266)
++..+.. -+++..|++| ||+|+|+||++||+|||+|||+++++||||||||||||||||+|||+| |.++.+.
T Consensus 657 ~~~~~~~------i~v~~~~~r~~~~sE~~~Lm~~RW~Kl~rdf~~k~~r~DiSKIpdiYD~~KYD~~HN~~-l~~~~~~ 729 (1018)
T KOG1057|consen 657 LIEPLDH------IDVERIQPRWPCHSETPDLMRERWEKLERDFYNKRERFDISKIPDIYDTIKYDLLHNRQ-LLLNGFD 729 (1018)
T ss_pred ccccccc------eeeecccCCCCcCCCCHHHHHHHHHHHHHHHhhhccccCccccchHHhhhhHHhhcchh-hhhcccc
Confidence 8877654 3456678999 999999999999999999999998899999999999999999999998 7778999
Q ss_pred HHHHHHHhhhcccccccccCCccchhhhHHhhhHHHHHHHHHHHHhhhhh-hhhhhccCCCCCCCCCCCCCccceeEEEe
Q psy10158 753 ELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEE-SEENVNRLNPQYSHGVSSPGRHVRTRLYF 831 (1266)
Q Consensus 753 ELY~laK~LaD~V~PQEYGIt~~EKL~IG~~is~pLLkKI~~DL~~~~ee-~~es~~RL~p~ys~gV~SP~RhVRTRlYF 831 (1266)
|||.+||.|||+|+||||||+++|||+||..+|.|||+||+.||++++|. .+++.||+||.| .||.|||||||||
T Consensus 730 ely~~ak~lad~vip~eYgi~~~~kl~I~~~~~~~ll~Ki~~dL~~~~e~~~~et~~~~~p~~----~sp~~~~r~~lY~ 805 (1018)
T KOG1057|consen 730 ELYKYAKLLADIVIPQEYGINPQEKLKIGQGICTPLLGKILSDLVRTLELESAETKNRLNPVY----LSPRRHVRTRLYF 805 (1018)
T ss_pred HHHHHHHhhcccccccccCCCHHHhhhhhhhhcchhhhhhhHhhhcchhhcchhhhcccCccc----cChhHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998884 378999999999 6999999999999
Q ss_pred ccchhHHHHHHHHHhCCCCccccCChHHHHHHHhhhcCCCCccccccceeeeeeCCCCCCCCCCceEEEEEEc
Q psy10158 832 TSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904 (1266)
Q Consensus 832 TSESHIHTLLNvLr~ggl~~~~~~~d~~~~ram~~l~~ipELdYLSqIvf~LYE~~~~d~~~~~rf~Iei~~S 904 (1266)
|+|||+|||+ ++||| + +.+.||||++|+++||||+...|+.++++|++||+|+
T Consensus 806 ~sk~~v~sl~-~~ryG-~------------------~~~~~ln~~~~t~~~L~~~~~~d~~~e~~~~~rlyFt 858 (1018)
T KOG1057|consen 806 TSKSHVHSLL-LRRYG-I------------------SDVEKLNDGLLTSIRLYEQILNDPTSERHFHTRLYFT 858 (1018)
T ss_pred hhHhhhhhhh-hhhcC-C------------------chhhhhcccchhceeechhhccCCcccccceeEEEec
Confidence 9999999999 99998 2 2478999999999999999999999999999999999
|
|
| >COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-27 Score=258.90 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=193.8
Q ss_pred EEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccc-cccccccccceeeccccCCCcH-HHHHHHHhhcCCcccc
Q psy10158 52 IVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCLISFHSKGFPL-EKAIKYANLRKPFVIN 129 (1266)
Q Consensus 52 ~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP~cD~LIsFfS~GfPL-~KAi~Y~klrkp~~lN 129 (1266)
.|.++.+.. ++-++..+..+.....-.+++-+..+.+. ++...-..+|++|.+-...+.. ..+++.++..+.++||
T Consensus 32 ~l~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~i~~R~~~~~~~~~~~~~~~E~~G~~viN 109 (318)
T COG0189 32 ELAILDDGD--LSLRKGEIKALARLVEVGEVIGLHYELIEEEDLSLLDELDVIIMRKDPPFDFATRFLRLAERKGVPVIN 109 (318)
T ss_pred eEEEEcccc--cccccchhHHHHHhhhhhhccccccccccccccchhccCCEEEEecCCchhhHHHHHHHHHHcCCeEEC
Confidence 344444444 44444445444444444457788888888 7778888999999999999888 7788899999999999
Q ss_pred CccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccC
Q psy10158 130 NLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTS 209 (1266)
Q Consensus 130 dl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s 209 (1266)
+..+....+||..+++.|+++|||+|.|+++..... .-..+ -+.+..|+|+||++|+
T Consensus 110 ~p~~i~~~~nK~~~~~~l~~~~ipvP~T~i~~~~~~---------~~~~~---~~~~g~pvVlKp~~Gs----------- 166 (318)
T COG0189 110 DPQSIRRCRNKLYTTQLLAKAGIPVPPTLITRDPDE---------AAEFV---AEHLGFPVVLKPLDGS----------- 166 (318)
T ss_pred CHHHHHhhhhHHHHHHHHHhcCCCCCCEEEEcCHHH---------HHHHH---HHhcCCCEEEeeCCCC-----------
Confidence 999999999999999999999999999999975210 11111 1223489999999998
Q ss_pred CCCchhhhhcccCCccccccCC-cccccC--cceEEeeccCC-CCceEEEEEECCceeE--EeeccCCCCCCceeecCCC
Q psy10158 210 AGGGSQRLFRKIGSRSSVYSPE-SRVRKS--GSFIYEDFMPT-DGTDVKVYTVGPDYAH--AEARKSPALDGKVERDSEG 283 (1266)
Q Consensus 210 ~GgGv~~LfrKignkSS~y~p~-s~vr~~--gSyIYEEFI~t-~GtDVKVYtVGp~~vh--Ae~RKSPvvDG~VRRN~hg 283 (1266)
.|.|+- +.+ +...++..- ...... ..+|.||||++ .+-|++|+++|+.+++ |++|... .|.||.|.|+
T Consensus 167 ~G~gV~-~v~---~~d~~l~~~~e~~~~~~~~~~ivQeyi~~~~~~~rrivv~~~~~~~~y~~~R~~~--~~~~R~N~a~ 240 (318)
T COG0189 167 GGRGVF-LVE---DADPELLSLLETLTQEGRKLIIVQEYIPKAKRDDRRVLVGGGEVVAIYALARIPA--SGDFRSNLAR 240 (318)
T ss_pred CccceE-Eec---CCChhHHHHHHHHhccccceEehhhhcCcccCCcEEEEEeCCEEeEEeeeccccC--CCCceeeccc
Confidence 466763 444 333111100 122223 46999999998 4478888888888888 8999884 8999999999
Q ss_pred CceeeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeCCCeEEEeecC
Q psy10158 284 KEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 284 KEiRypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNG 330 (1266)
|+...+++||++++++|.|||+++|+.+|||||+++++|.||||||.
T Consensus 241 Gg~~e~~~l~~e~~elA~kaa~~lGl~~~GVDiie~~~g~~V~EVN~ 287 (318)
T COG0189 241 GGRAEPCELTEEEEELAVKAAPALGLGLVGVDIIEDKDGLYVTEVNV 287 (318)
T ss_pred cccccccCCCHHHHHHHHHHHHHhCCeEEEEEEEecCCCcEEEEEeC
Confidence 99999999999999999999999999999999999999999999997
|
|
| >PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-26 Score=231.13 Aligned_cols=173 Identities=25% Similarity=0.392 Sum_probs=94.5
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhh
Q psy10158 137 IQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQR 216 (1266)
Q Consensus 137 lrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~ 216 (1266)
+.||..++++|+++|||+|+|.++.... +...++.--+ .+|+|+||+.|. .|.|+.
T Consensus 1 a~dK~~~~~~l~~~gipvP~t~~~~~~~---------~~~~~~~~~~---~~p~ViKp~~g~-----------~G~gV~- 56 (190)
T PF08443_consen 1 AEDKLLTLQLLAKAGIPVPETRVTNSPE---------EAKEFIEELG---GFPVVIKPLRGS-----------SGRGVF- 56 (190)
T ss_dssp -HBHHHHHHHHHHTT-----EEEESSHH---------HHHHHHHHH-----SSEEEE-SB------------------E-
T ss_pred CCCHHHHHHHHHHCCcCCCCEEEECCHH---------HHHHHHHHhc---CCCEEEeeCCCC-----------CCCEEE-
Confidence 3689999999999999999999996421 1222221111 399999999997 477874
Q ss_pred hhcccCCccccccCCcccccCcceEEeeccCC-CCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHH
Q psy10158 217 LFRKIGSRSSVYSPESRVRKSGSFIYEDFMPT-DGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNA 295 (1266)
Q Consensus 217 LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t-~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~e 295 (1266)
+++......+..+ ..-..+..+++|+||+. +|.|+||||||+++++|+.|.++ +|.||+|.+.|+...++.|+++
T Consensus 57 ~i~~~~~~~~~l~--~~~~~~~~~~~Q~fI~~~~g~d~Rv~Vig~~vv~a~~r~~~--~~d~r~n~~~g~~~~~~~l~~e 132 (190)
T PF08443_consen 57 LINSPDELESLLD--AFKRLENPILVQEFIPKDGGRDLRVYVIGGKVVGAYRRSSP--EGDFRTNLSRGGKVEPYDLPEE 132 (190)
T ss_dssp EEESHCHHHHHHH-------TTT-EEEE----SS---EEEEEETTEEEEEEE--------------------EE----HH
T ss_pred EecCHHHHHHHHH--HHHhccCcceEeccccCCCCcEEEEEEECCEEEEEEEEecC--cccchhhhccCceEEEecCCHH
Confidence 5554322111111 11125788899999997 45999999999999999999997 8899999999999999999999
Q ss_pred HHHHHHHHHHHhCCccceeeEEeeCCCeEEEeecCceecccC
Q psy10158 296 EKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNS 337 (1266)
Q Consensus 296 EK~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNGwSFVK~n 337 (1266)
.+++|.++++++|+++|||||++.++++||||||.+.--++.
T Consensus 133 ~~~~a~~~~~~lgl~~~giDi~~~~~~~~v~EvN~~~~~~~~ 174 (190)
T PF08443_consen 133 IKELALKAARALGLDFAGIDILDTNDGPYVLEVNPNPGFRGI 174 (190)
T ss_dssp HHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEETT---TTH
T ss_pred HHHHHHHHHHHhCCCEEEEEEEecCCCeEEEEecCCchHhHH
Confidence 999999999999999999999999999999999998765543
|
It has an unusual nucleotide-binding fold referred to as palmate, or ATP-grasp fold. This domain is found in a number of enzymes of known structure as well as in urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis.; PDB: 1UC8_B 1UC9_A. |
| >PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-24 Score=225.20 Aligned_cols=334 Identities=25% Similarity=0.329 Sum_probs=205.9
Q ss_pred eeeceEEEEEcCCCCcccceeEEeechhHHHHHHhhCCCCCCcccccChHHHHHHHHHHHHHHHHhhhCCCChhhHHhHH
Q psy10158 385 ELRCVVAVIRHGDRTPKQKMKVEVRHPKFFEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSADPEIEEKQG 464 (1266)
Q Consensus 385 eLr~VVaViRHgDRTPKQKlK~~v~~~~Fi~Ll~~~~g~k~~evkLK~~~qLqevLd~~r~ll~~~~~~~~~~e~eE~~~ 464 (1266)
||+.|+.|+|||||||-.+++..+..+.+.++..
T Consensus 1 ~L~~v~v~~RHG~R~P~~~~~~~~~~~~~~~~~~---------------------------------------------- 34 (347)
T PF00328_consen 1 ELEQVQVLHRHGDRTPLSSFPKDVTEWWDCELES---------------------------------------------- 34 (347)
T ss_dssp EEEEEEEEEE--SBB-SHHHHHHHHHHHHHHHHT----------------------------------------------
T ss_pred CEEEEEEEEeCcCCcCCCCCCccccccccchhhh----------------------------------------------
Confidence 6999999999999999888764444333332221
Q ss_pred HHHHHHHHHHhcCCCCCCcceEEeeecCCCCCCCCCCCccccccCCCCCCeEEEEEecCCccChhHHHHHHHHHHHHHhc
Q psy10158 465 KLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCM 544 (1266)
Q Consensus 465 KL~qLk~VLe~~g~fsGINrKVQLKp~~~~~p~~~~~~~~~~~v~~~~e~kllLIlKWGGElThaGR~QAeeLG~~fR~m 544 (1266)
.+..++.+++|+|.+.+ .. .....+||+ ||+.|..|..+||+.||..
T Consensus 35 ----~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~g~-LT~~G~~q~~~lG~~lr~~ 81 (347)
T PF00328_consen 35 ----SAMSPETPGPFPGNYIQ--NE--------------------------FNWPCKWGQ-LTPRGMEQHYQLGKRLRER 81 (347)
T ss_dssp ----HHHHHTGGSGGGGTT----TC--------------------------CGSSSCTTS-BTHHHHHHHHHHHHHHHHH
T ss_pred ----hhcccCCCCCccccccc--cc--------------------------cccCCCCCc-ccchhhhHHHHHHHHHHHH
Confidence 56667788899986544 11 012357899 9999999999999999998
Q ss_pred cCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccC-----------CcCceeeeeecc--cccCCCC
Q psy10158 545 YPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEG-----------ELTPILVQMVKS--ANTNGLL 611 (1266)
Q Consensus 545 YPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEg-----------eLtPIlVslVk~--~~~~~LL 611 (1266)
|+ +|+.-+.+. .+++||||+..||++||+||+.||+...+ .-.|+-+..+.. ....++|
T Consensus 82 Y~-------~l~~~~~~~-~~v~vrSt~~~Rt~~Sa~af~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (347)
T PF00328_consen 82 YP-------GLFPDNYNP-EQVYVRSTNKQRTIQSAQAFLQGLYPPSGEPFPDITQPPNSWQPIPVHTIPEIKKNDDDIL 153 (347)
T ss_dssp HH-------TSSTSSS-T-TTEEEEEESSHHHHHHHHHHHHHHSHTTSS-ECTTTSCTSCTCTEEEEEEECCHCGTTSSS
T ss_pred HH-------Hhccccccc-cceeEEEeccchHHHHHHHHHHHHhCCCccccccccccccCCCCcceeeccccccccchhc
Confidence 98 455444445 79999999999999999999999997665 233444444322 1112222
Q ss_pred CCCCcchHHHHHHHHHHHHHHhcCCCCChhcccccCCCCcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHhhccCccc
Q psy10158 612 DNDSDASKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKC 691 (1266)
Q Consensus 612 Dds~~a~~~md~vKk~L~~lL~~~~~~~~e~~~~l~p~~~~s~~~al~~i~nP~~~~~~v~~l~~~l~~~~~~~~~d~~~ 691 (1266)
-.... .|++.-... ..+-......+......+...+.....
T Consensus 154 ~~~~~------~C~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~---- 194 (347)
T PF00328_consen 154 LPNYD------NCPAYNEID-----------------------------SENEKEQSEEIDKWNQDFQESLAKRLQ---- 194 (347)
T ss_dssp STSHT------THHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred ccccc------hhHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHhhhhhhhhc----
Confidence 11110 111100000 000000001111111111111110000
Q ss_pred ccCcCCCCCCHHHHHHHHHHHHHHhhcccCcccCCCCCcchhhhhhhhhcCccccCcccHHHHHHHHHhhhccccccccc
Q psy10158 692 KESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYG 771 (1266)
Q Consensus 692 ~~~~~c~gE~~~L~~eRW~KL~~dF~~~~k~fD~SKIpDiYD~iKYD~lHNr~fL~~~~l~ELY~laK~LaD~V~PQEYG 771 (1266)
..|+|+....+...|..++..++... ..+.+++|++|+.+++|++++.. +..++++|.. ||
T Consensus 195 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------------~~ 255 (347)
T PF00328_consen 195 ---KVIPGEDNLTFFDVWAIFDDCLYEQI-YNDGSPFPEWFTDMKEDALQLEY---LEDLKEYYQY------------YG 255 (347)
T ss_dssp ---HHSTTCEECTHHHHHHHHHHHHHHHH-HHTT-GGGGGSCHTSHHHHHHHH---HHHHHHHHHH------------CS
T ss_pred ---cccCccccccchhhhhhhhhhhhhhc-cCCCCCCchhhcccchHHHHHHh---hhhHHHHhhc------------cc
Confidence 01677777788999999999998755 47899999999999999999875 3345566665 88
Q ss_pred CCccchhhhHHhhhHHHHHHHHHHHHhhhhhhhhhhccCCCCCCCCCCCCCccceeEEEeccchhHHHHHHHHHhCCCCc
Q psy10158 772 MTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTE 851 (1266)
Q Consensus 772 It~~EKL~IG~~is~pLLkKI~~DL~~~~ee~~es~~RL~p~ys~gV~SP~RhVRTRlYFTSESHIHTLLNvLr~ggl~~ 851 (1266)
.+++. +.+.+.|||+.|+..++...+. .++.+..|-.|||+..+.|..||.+| |+..
T Consensus 256 ~~~~~----~~~~~~~ll~~ll~~l~~~~~~----------------~~~~~~~k~~~~s~HD~tl~~ll~~L---gl~~ 312 (347)
T PF00328_consen 256 YSDEI----ARLQGGPLLNELLRRLKQAING----------------NSPGRPPKLVLYSGHDTTLMPLLSAL---GLDN 312 (347)
T ss_dssp TTHHH----HHHHHHHHHHHHHHHHHHCHSS----------------TCSCSSCSEEEEEE-HHHHHHHHHHT---TCTT
T ss_pred CCchH----HHHHHhHHHHHHHHHHhhcccc----------------ccccccceEEEEecCHHHHHHHHHHh---CCCc
Confidence 88874 4555667777777777632221 11334568999999999999999998 4544
Q ss_pred cccCChHHHHHHHhhhcCCCCccccccceeeeeeCCCCCCCCCCceEEEEEEc
Q psy10158 852 SVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFS 904 (1266)
Q Consensus 852 ~~~~~d~~~~ram~~l~~ipELdYLSqIvf~LYE~~~~d~~~~~rf~Iei~~S 904 (1266)
. .... ...--.|-|+|+||||++ +.+.|.||+.+.
T Consensus 313 ~--~~~~----------~~~~pp~as~l~fEl~~~------~~~~~~Vr~~yN 347 (347)
T PF00328_consen 313 Y--SPPY----------QSYWPPYASNLVFELYRD------SGKNYYVRVLYN 347 (347)
T ss_dssp T--STTT----------HSSCSSTT-EEEEEEEEE------TTTEEEEEEEET
T ss_pred c--Cccc----------cCCCCCccceeEEEEEEe------CCCcEEEEEEEC
Confidence 1 1100 022346889999999998 222399999874
|
Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B .... |
| >PRK10446 ribosomal protein S6 modification protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=220.46 Aligned_cols=247 Identities=18% Similarity=0.262 Sum_probs=180.7
Q ss_pred EEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccc-c---c-------cccccccceeeccccCCCc--HHHHHH
Q psy10158 52 IVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-K---P-------VDEWPIVDCLISFHSKGFP--LEKAIK 118 (1266)
Q Consensus 52 ~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvIL-e---~-------vE~WP~cD~LIsFfS~GfP--L~KAi~ 118 (1266)
+|||-+.+....| -+.|++-|.+.| ++++++.-+.+. . . ......+|++|++....+. -....+
T Consensus 2 ~~~i~~~~~s~~s--~~~~~~a~~~~g-~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~ 78 (300)
T PRK10446 2 KIAILSRDGTLYS--CKRLREAAIQRG-HLVEILDPLSCYMNINPAASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALR 78 (300)
T ss_pred eEEEEecCCcchh--HHHHHHHHHHcC-CeEEEEehHHceEecCCCcccEEECCcccCCCCEEEEcCCCchhhHHHHHHH
Confidence 4666666655444 345555566655 455555433321 1 0 1234578999997644322 244467
Q ss_pred HHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE-EEcCeEecCCEEEecccc
Q psy10158 119 YANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV-EVNGIVFNKPFVEKPVSA 197 (1266)
Q Consensus 119 Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I-~v~G~~~~kPfVeKpv~G 197 (1266)
.++..+|+++|+..+..+.+||..++++|+++|||+|++.++.... +..+.+ ..+| .|+|+||++|
T Consensus 79 ~le~~g~~v~n~~~a~~~~~dK~~~~~~l~~~gip~P~t~~~~~~~---------~~~~~~~~~~~----~P~VvKP~~g 145 (300)
T PRK10446 79 QFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPD---------DTSDLIDMVGG----APLVVKLVEG 145 (300)
T ss_pred HHHHCCCceecCHHHHHhhhcHHHHHHHHHHcCCCCCCEEEeCCHH---------HHHHHHHHhCC----CCEEEEECCC
Confidence 8888899999999999999999999999999999999999874210 011111 1223 7999999999
Q ss_pred cCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCC-CCceEEEEEECCceeEEeeccCCCCCCc
Q psy10158 198 EDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPT-DGTDVKVYTVGPDYAHAEARKSPALDGK 276 (1266)
Q Consensus 198 edHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t-~GtDVKVYtVGp~~vhAe~RKSPvvDG~ 276 (1266)
. .|.|+. +++........+. .....+..+|+||||+. .|.|+||+++|+++++|+.|.++ .|.
T Consensus 146 ~-----------~g~GV~-~v~~~~~~~~~~~--~~~~~~~~~lvQe~I~~~~g~d~rv~vig~~~~~~~~r~~~--~~~ 209 (300)
T PRK10446 146 T-----------QGIGVV-LAETRQAAESVID--AFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAK--EGD 209 (300)
T ss_pred C-----------CcccEE-EEcCHHHHHHHHH--HHHhcCCCEEEEeeeccCCCceEEEEEECCEEEEEEEEecC--CCc
Confidence 7 477774 4432111000000 01123567999999985 79999999999999999999885 578
Q ss_pred eeecCCCCceeeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeCCCeEEEeecC
Q psy10158 277 VERDSEGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 277 VRRN~hgKEiRypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNG 330 (1266)
|+.|.+.|+..+++.|+++.+++|.++++++|+.++|||++...+++||+|||.
T Consensus 210 ~~~n~~~g~~~~~~~l~~~~~~~a~~a~~alg~~~~gvD~~~~~~g~~vlEvN~ 263 (300)
T PRK10446 210 FRSNLHRGGAASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNA 263 (300)
T ss_pred hhheeccCCeeccCCCCHHHHHHHHHHHHHhCCCEEEEEEEEcCCCcEEEEEEC
Confidence 999999999999999999999999999999999999999999877799999996
|
|
| >TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-22 Score=206.43 Aligned_cols=244 Identities=21% Similarity=0.229 Sum_probs=178.7
Q ss_pred EEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccc---cc-cccccccceeeccccCCCcHHHHHHHHhhcCCccc
Q psy10158 53 VGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ---KP-VDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVI 128 (1266)
Q Consensus 53 iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvIL---e~-vE~WP~cD~LIsFfS~GfPL~KAi~Y~klrkp~~l 128 (1266)
|||++=.... =++.+.+.|.+.| +++.+|....+. .. -..|+.+|+++.+...+..-..+.++++..+.+++
T Consensus 2 ~~~~~~~~~~---~~~~l~~a~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~r~~~~~~~~~~~~~l~~~g~~~~ 77 (277)
T TIGR00768 2 LAILYDRIRL---DEKMLKEAAEELG-IDYKVVTPPAIPLTFNEGPRELAELDVVIVRIVSMFRGLAVARYLESLGVPVI 77 (277)
T ss_pred EEEEEcCCCH---HHHHHHHHHHHcC-CceEEEEhHHcEEeccCCCccCCCCCEEEEechhHhhHHHHHHHHHHCCCeee
Confidence 6776654322 4556666666665 456666544332 11 22389999999987544444567788888888889
Q ss_pred cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEecc
Q psy10158 129 NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPT 208 (1266)
Q Consensus 129 Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~ 208 (1266)
|+.....+.+||+..+++|+++|||+|++..+.... +....+. .+..|+|+||..|.
T Consensus 78 ~~~~~~~~~~dK~~~~~~l~~~gi~~P~t~~~~~~~---------~~~~~~~----~~~~p~vvKP~~g~---------- 134 (277)
T TIGR00768 78 NSSDAILNAGDKFLTSQLLAKAGLPQPRTGLAGSPE---------EALKLIE----EIGFPVVLKPVFGS---------- 134 (277)
T ss_pred CCHHHHHHHhhHHHHHHHHHHCCCCCCCEEEeCCHH---------HHHHHHH----hcCCCEEEEECcCC----------
Confidence 999999999999999999999999999999885311 1111121 12379999999996
Q ss_pred CCCCchhhhhcccCCccccccCCcccc----cCcceEEeeccCCC-CceEEEEEECCceeEEeeccCCCCCCceeecCCC
Q psy10158 209 SAGGGSQRLFRKIGSRSSVYSPESRVR----KSGSFIYEDFMPTD-GTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 283 (1266)
Q Consensus 209 s~GgGv~~LfrKignkSS~y~p~s~vr----~~gSyIYEEFI~t~-GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hg 283 (1266)
.|.|+. +++. .......-..++ ....||+||||+.. |.|+||+++|+++++++.|.. .+.++.|.+.
T Consensus 135 -~g~gv~-~i~~---~~~l~~~~~~~~~~~~~~~~~lvQe~I~~~~~~~~rv~v~~~~~~~~~~r~~---~~~~~~n~~~ 206 (277)
T TIGR00768 135 -WGRLVS-LARD---KQAAETLLEHFEQLNGPQNLFYVQEYIKKPGGRDIRVFVVGDEVIAAIYRIT---SGHWRTNLAR 206 (277)
T ss_pred -CCCceE-EEcC---HHHHHHHHHHHHHhcccCCcEEEEeeecCCCCceEEEEEECCEEEEEEEEcC---CCchhhhhhc
Confidence 355653 3332 111110000111 12579999999964 589999999999999998873 5679999998
Q ss_pred CceeeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeC-CCeEEEeecCc
Q psy10158 284 KEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRAN-GKSFVCDVNGF 331 (1266)
Q Consensus 284 KEiRypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~-ggsyVcDVNGw 331 (1266)
++...++.|+++.+++|.++++++|..+||||++... |++||+|||..
T Consensus 207 g~~~~~~~l~~~~~~~a~~~~~~l~~~~~~vD~~~~~~g~~~viEiN~~ 255 (277)
T TIGR00768 207 GGKAEPCPLTEEIEELAIKAAKALGLDVVGIDLLESEDRGLLVNEVNPN 255 (277)
T ss_pred CCeeeecCCCHHHHHHHHHHHHHhCCCeEEEEEEEcCCCCeEEEEEcCC
Confidence 8888899999999999999999999999999999984 58999999985
|
This family, related to bacterial glutathione synthetases, contains at least two different alpha-L-glutamate ligases. One is RimK, as in E. coli, which adds additional Glu residues to the native Glu-Glu C-terminus of ribosomal protein S6, but not to Lys-Glu mutants. Most species with a member of this subfamily lack an S6 homolog ending in Glu-Glu, however. Members in Methanococcus jannaschii act instead as a tetrahydromethanopterin:alpha-l-glutamate ligase (MJ0620) and a gamma-F420-2:alpha-l-glutamate ligase (MJ1001). |
| >KOG1057|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-23 Score=244.52 Aligned_cols=137 Identities=33% Similarity=0.491 Sum_probs=119.2
Q ss_pred cccHHHHHHHHHhhhcccccccccCCccchhhhHHhhhHHHHHHHHHHHHhhhhhhhhhhccCCCCCCCCCCCCCcccee
Q psy10158 748 FDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRT 827 (1266)
Q Consensus 748 ~~~l~ELY~laK~LaD~V~PQEYGIt~~EKL~IG~~is~pLLkKI~~DL~~~~ee~~es~~RL~p~ys~gV~SP~RhVRT 827 (1266)
+..+.+||..+|.++|+++|++|||++.+||.||..|+.+|..+|.+|. ++.||++|
T Consensus 797 ~~~r~~lY~~sk~~v~sl~~~ryG~~~~~~ln~~~~t~~~L~~~~~~d~-----------------------~~e~~~~~ 853 (1018)
T KOG1057|consen 797 RHVRTRLYFTSKSHVHSLLLRRYGISDVEKLNDGLLTSIRLYEQILNDP-----------------------TSERHFHT 853 (1018)
T ss_pred HHHHHHHhhhhHhhhhhhhhhhcCCchhhhhcccchhceeechhhccCC-----------------------ccccccee
Confidence 4568999999999999999999999999999999999999999999998 35579999
Q ss_pred EEEeccchhHHHHHHHHHhCCCCccc-cCChHHHHHHHhhhcCCCCccccccceeeeeeCCCCCCCCCCceEEEEEEcCC
Q psy10158 828 RLYFTSESHIHSLLTVLRYGGLTESV-HMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPG 906 (1266)
Q Consensus 828 RlYFTSESHIHTLLNvLr~ggl~~~~-~~~d~~~~ram~~l~~ipELdYLSqIvf~LYE~~~~d~~~~~rf~Iei~~SpG 906 (1266)
|+|||+|||||+|+||++++.+.++- .....+.++|+++++.++|||||+||||||||++. ++.++||+|||++|||
T Consensus 854 rlyFtreshi~~l~nv~~~~~~dEs~~g~~~~~~~~~l~r~~~~~eld~~~~i~fel~e~t~--~S~~Kr~~~~lt~s~g 931 (1018)
T KOG1057|consen 854 RLYFTRESHIYTLMNVIRYCNLDESDRGLPMKICRNALPRLCDLKELDYLSQIVFELFENTE--ASGPKRFSIRLTSSRG 931 (1018)
T ss_pred EEEeccchhhhhhhhHhhhccccccccCCccccCcccCcccccchhhhhHHHHHHHHhcccc--cccCcccceEEeecCC
Confidence 99999999999999999987665531 11223567788888889999999999999999974 4668999999999999
Q ss_pred Ccc
Q psy10158 907 VNC 909 (1266)
Q Consensus 907 a~~ 909 (1266)
|+.
T Consensus 932 ~~~ 934 (1018)
T KOG1057|consen 932 CDL 934 (1018)
T ss_pred ccc
Confidence 553
|
|
| >PLN02941 inositol-tetrakisphosphate 1-kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-21 Score=214.02 Aligned_cols=273 Identities=16% Similarity=0.204 Sum_probs=193.2
Q ss_pred CCcCCCCeEEEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccccccccccccceeeccccCCCcHHHHHHHHhh
Q psy10158 43 PCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDCLISFHSKGFPLEKAIKYANL 122 (1266)
Q Consensus 43 ~~~~~~~~i~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvILe~vE~WP~cD~LIsFfS~GfPL~KAi~Y~kl 122 (1266)
......+..+||-|--.||.+|==-..|++.+.+.| ++++.-..+. |++.=-.+|++|-....-.=-....+|...
T Consensus 14 ~~~~~~~~~~vGy~l~~kk~~~~~~~~l~~~~~~~G-i~~v~Id~~~---pl~~qgpfDvilhK~~~~~~~~~~~~~~~e 89 (328)
T PLN02941 14 SSSSQQKRFVVGYALTPKKVKSFLQPSLEALARSKG-IDLVAIDPSR---PLSEQGPFDVILHKLYGKEWRQQLEEYREK 89 (328)
T ss_pred cccccCCceEEEEEECHHHHHHHhhHHHHHHHHHCC-CeEEEecCCC---CccccCCcCEEEEecCCHHHHHHHHHHHHH
Confidence 444556789999888888888866667888777766 4444433332 333222479999887543223566677665
Q ss_pred c-CCccccCccchhhhhHHHHHHHHHHhcC-------CCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEec
Q psy10158 123 R-KPFVINNLNMQYDIQDRRKVYALLEKEG-------IEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKP 194 (1266)
Q Consensus 123 r-kp~~lNdl~~Q~ilrDRr~vlqiL~~~g-------Ip~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKp 194 (1266)
. +..+||.+.++..+.||...+++|++.| ||+|+++++..... .+. ..... ..++.|+|.||
T Consensus 90 ~pgv~vidp~~ai~~~~dR~~~~~~L~~~~~~~~~~~i~~P~t~v~~~~~~-----al~---~~~~~--~~l~~P~V~KP 159 (328)
T PLN02941 90 HPDVTVLDPPDAIQRLHNRQSMLQVVADLKLSDGYGSVGVPKQLVVYDDES-----SIP---DAVAL--AGLKFPLVAKP 159 (328)
T ss_pred CCCcEEECCHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCCEEEEcCHHH-----HHH---HHHHH--hcCCCCEEEee
Confidence 5 6789999999999999999999999999 99999999965311 000 00111 12568999999
Q ss_pred ccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCC
Q psy10158 195 VSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALD 274 (1266)
Q Consensus 195 v~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvD 274 (1266)
+.|.. ++.|-|+.++|.. +..-..+..|+.||||.-+|.|+||||||+.+ +|+.|+| .
T Consensus 160 l~g~G--------ss~gh~m~lv~~~----------~~L~~l~~p~~lQEfVnh~g~d~RVfVvGd~v-~~~~R~S---~ 217 (328)
T PLN02941 160 LVADG--------SAKSHKMSLAYDQ----------EGLSKLEPPLVLQEFVNHGGVLFKVYVVGDYV-KCVRRFS---L 217 (328)
T ss_pred cccCC--------CccccceEEecCH----------HHHHhcCCcEEEEEecCCCCEEEEEEEECCEE-EEEEecC---C
Confidence 99931 2246665433332 21112355799999999999999999999994 9999998 4
Q ss_pred Ccee---ecCCCC----------------ce-------eeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeC---CCeEE
Q psy10158 275 GKVE---RDSEGK----------------EI-------RYPVILSNAEKLISRKVCLAFKQTVCGFDLLRAN---GKSFV 325 (1266)
Q Consensus 275 G~VR---RN~hgK----------------Ei-------RypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~---ggsyV 325 (1266)
+.++ .|++.| +. ..+...+++-+++|.++++++|+.++||||++.. ++-+|
T Consensus 218 ~n~~~~~~n~~~G~~~f~~vs~~~~~~~~~~~~~~~~~~~~~p~~~~l~~La~~~r~alGl~l~GvDvI~~~~~~~~~~V 297 (328)
T PLN02941 218 PDVSEEELSSAEGVLPFPRVSNAAASADDADNGGLDPEVAELPPRPFLEDLARELRRRLGLRLFNFDMIREHGTGDRYYV 297 (328)
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCChHHHHHHHHHHHHHhCCceEEEEEEeecCCCCceEE
Confidence 4566 777766 32 3444556678999999999999999999999985 47889
Q ss_pred EeecCceecccCchhhHHHHHHHHHH
Q psy10158 326 CDVNGFSFVKNSNKYYDDSAKILGNM 351 (1266)
Q Consensus 326 cDVNGwSFVK~n~kYYDdcA~ILr~~ 351 (1266)
+|||++==-|+-..|+..-.+.|.++
T Consensus 298 idVN~fP~~k~~p~~~~~l~~~~~~~ 323 (328)
T PLN02941 298 IDINYFPGYAKMPGYETVLTDFLLSL 323 (328)
T ss_pred EEecCCCccccCCchHHHHHHHHHHH
Confidence 99999943455666766544444433
|
|
| >TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-21 Score=204.97 Aligned_cols=234 Identities=18% Similarity=0.187 Sum_probs=171.9
Q ss_pred hHHHHHHHHhhcCcEEEEEecccccc---cccccccccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHH
Q psy10158 66 PMKEILTRLEEFEFIKMIVFSEETIQ---KPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRK 142 (1266)
Q Consensus 66 PMr~IL~RL~~~g~f~viiF~dkvIL---e~vE~WP~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~ 142 (1266)
-++.|.+-|.+.|.-=..+.-++... ++...|..||++|.+-..+...-.....++..+..++|+.....+.+||..
T Consensus 11 ~~~~l~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~r~~~~~~~~~~~~~le~~g~~~~n~~~~~~~~~dK~~ 90 (280)
T TIGR02144 11 DEKMLIEELEKLGLPYRKIYVPALPLPFGERPKELEDVDVAIIRCVSQSRALYSARLLEALGVPVINSSHVIEACGDKIF 90 (280)
T ss_pred HHHHHHHHHHHcCCceEEEEhhheEEEcCCCccccCCCCEEEEcCcchhhHHHHHHHHHHCCCcEECcHHHHHHHhhHHH
Confidence 35667777777764323334443322 455789999999988433333334455667778888999999999999999
Q ss_pred HHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccC
Q psy10158 143 VYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIG 222 (1266)
Q Consensus 143 vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKig 222 (1266)
.+++|+++|||+|.+..+.... +..+.+ ..+..|+|+||..|. .|.|+. ++.
T Consensus 91 ~~~~l~~~gip~P~t~~~~~~~---------~~~~~~----~~~~~P~vvKP~~g~-----------~g~gv~-~v~--- 142 (280)
T TIGR02144 91 TYLKLAKAGVPTPRTYLAFDRE---------AALKLA----EALGYPVVLKPVIGS-----------WGRLVA-LIR--- 142 (280)
T ss_pred HHHHHHHCCcCCCCeEeeCCHH---------HHHHHH----HHcCCCEEEEECcCC-----------CcCCEE-EEC---
Confidence 9999999999999999875311 011111 113479999999986 355653 332
Q ss_pred Ccccccc---CCccc--ccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHH
Q psy10158 223 SRSSVYS---PESRV--RKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK 297 (1266)
Q Consensus 223 nkSS~y~---p~s~v--r~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK 297 (1266)
+...... ....+ ..+..+|+||||+..|.|++|+++|+.++|++.|.+ +.++.|.+.++...++.|+++.+
T Consensus 143 ~~~~l~~~~~~~~~~~~~~~~~~ivQefI~~~~~d~~v~vig~~~~~~~~r~~----~~~~~~~~~g~~~~~~~~~~~~~ 218 (280)
T TIGR02144 143 DKDELESLLEHKEVLGGSQHKLFYIQEYINKPGRDIRVFVIGDEAIAAIYRYS----NHWRTNTARGGKAEPCPLDEEVE 218 (280)
T ss_pred CHHHHHHHHHHHHhhcCCcCCeEEEEcccCCCCCceEEEEECCEEEEEEEEcC----CchhhhhhcCCceeccCCCHHHH
Confidence 1111100 00011 124579999999977899999999999999999976 56899988888888999999999
Q ss_pred HHHHHHHHHhCCccceeeEEee-CCCeEEEeecCc
Q psy10158 298 LISRKVCLAFKQTVCGFDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 298 ~IA~kaakAFGq~VCGfDLLRs-~ggsyVcDVNGw 331 (1266)
++|.++++++|..++|||++.. +|++||+|||.+
T Consensus 219 ~~a~~~~~~lg~~~~~vD~~~~~~g~~~v~EvN~~ 253 (280)
T TIGR02144 219 ELAVKAAEAVGGGVVAIDIFESKERGLLVNEVNHV 253 (280)
T ss_pred HHHHHHHHHhCCCeEEEEEEEcCCCCEEEEEEeCC
Confidence 9999999999999999999997 568999999975
|
The family of proteins found in this equivalog include the characterized LysX from Thermus thermophilus which is part of a well-organized lysine biosynthesis gene cluster. LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this equivalog contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterized in E. coli, and acts by ATP-dependent condensation of S6 with glutamate residues. |
| >PRK05246 glutathione synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-21 Score=212.33 Aligned_cols=197 Identities=14% Similarity=0.174 Sum_probs=152.5
Q ss_pred ccccccceeeccccCCCcH-----HHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcc
Q psy10158 95 DEWPIVDCLISFHSKGFPL-----EKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVK 169 (1266)
Q Consensus 95 E~WP~cD~LIsFfS~GfPL-----~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~ 169 (1266)
-.||.+|+++.+-..-|.. ...+++++.++..++|+.......+||+..++++. ++|+|.+.....
T Consensus 75 ~~l~~~D~v~~R~~~~~~~~~~~~~~~l~~le~~g~~v~N~p~~l~~~~dK~~~~~l~~----~vP~T~~~~~~~----- 145 (316)
T PRK05246 75 LPLADFDVILMRKDPPFDMEYIYATYLLERAERPGTLVVNKPQSLRDANEKLFTLWFPE----LMPPTLVTRDKA----- 145 (316)
T ss_pred CccccCCEEEEcCCCCCChHHHHHHHHHHHHHhCCCeEECCHHHHHhCccHHHHHhhhc----cCCCEEEeCCHH-----
Confidence 3478899999886555553 45777888889999999999999999999999876 899998875311
Q ss_pred ccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccC-CccccccCCcccc--cCcceEEeecc
Q psy10158 170 HELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIG-SRSSVYSPESRVR--KSGSFIYEDFM 246 (1266)
Q Consensus 170 ~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKig-nkSS~y~p~s~vr--~~gSyIYEEFI 246 (1266)
+..+++.-. .|+|+||+.|. .|.|+- +.++-+ +..+.+. .+. ....||.|+||
T Consensus 146 ----~~~~~~~~~-----~~vVlKP~~G~-----------~G~gV~-~i~~~~~~~~~~~~---~l~~~~~~~~lvQ~~I 201 (316)
T PRK05246 146 ----EIRAFRAEH-----GDIILKPLDGM-----------GGAGIF-RVKADDPNLGSILE---TLTEHGREPVMAQRYL 201 (316)
T ss_pred ----HHHHHHHHC-----CCEEEEECCCC-----------CccceE-EEeCCCccHHHHHH---HHHHccCCeEEEEecc
Confidence 111222212 48999999998 577774 333211 0011111 122 24689999999
Q ss_pred CC-CCceEEEEEECCceeE-EeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHH---HHhCCccceeeEEeeCC
Q psy10158 247 PT-DGTDVKVYTVGPDYAH-AEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVC---LAFKQTVCGFDLLRANG 321 (1266)
Q Consensus 247 ~t-~GtDVKVYtVGp~~vh-Ae~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaa---kAFGq~VCGfDLLRs~g 321 (1266)
+. ++.|+||+++|++++| |+.|.++ .|.||.|.|.|+...++.||++|++||.+++ +++|+.+|||||+
T Consensus 202 ~~~~~~D~Rv~vv~g~vv~~a~~R~~~--~~~~rtN~~~Gg~~~~~~l~~~~~~ia~~~~~~l~~~gl~~~GVDli---- 275 (316)
T PRK05246 202 PEIKEGDKRILLVDGEPVGYALARIPA--GGETRGNLAAGGRGEATPLTERDREICAAIGPELKERGLIFVGIDVI---- 275 (316)
T ss_pred ccCCCCCEEEEEECCEEhhheeEecCC--CCCcccCccCCceEeccCCCHHHHHHHHHHHHHHHHhCCCEEEEEEe----
Confidence 86 5789999999999999 9999986 6899999999999999999999999999999 5779999999999
Q ss_pred CeEEEeecC
Q psy10158 322 KSFVCDVNG 330 (1266)
Q Consensus 322 gsyVcDVNG 330 (1266)
+.||+|||.
T Consensus 276 ~~~l~EvN~ 284 (316)
T PRK05246 276 GDYLTEINV 284 (316)
T ss_pred CCEEEEEeC
Confidence 358999993
|
|
| >TIGR01380 glut_syn glutathione synthetase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.8e-21 Score=208.34 Aligned_cols=197 Identities=16% Similarity=0.200 Sum_probs=151.6
Q ss_pred ccccccceeeccccCCCcH-----HHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcc
Q psy10158 95 DEWPIVDCLISFHSKGFPL-----EKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVK 169 (1266)
Q Consensus 95 E~WP~cD~LIsFfS~GfPL-----~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~ 169 (1266)
-.|+.+|++|.+-...|.. ...+++++..+..++|+........||...++++. ++|.|++.+...
T Consensus 74 ~~l~~~D~v~~R~~~~~~~~~~~~~~~l~~le~~g~~viN~p~~i~~~~dK~~~~~~~~----~vP~T~v~~~~~----- 144 (312)
T TIGR01380 74 LSLGELDAVLMRKDPPFDMEYIYATYLLELADPTGTLVINSPQGLRDANEKLFTLQFPK----VIPPTLVTRDKA----- 144 (312)
T ss_pred cccccCCEEEEeCCCCCChhhhHHHHHHHHHHhCCCeEEeCHHHHHhhhhHHHHhhCcC----CCCCEEEeCCHH-----
Confidence 4588999999987655553 46788888888999999999999999999888763 899999875311
Q ss_pred ccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc--cCcceEEeecc
Q psy10158 170 HELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR--KSGSFIYEDFM 246 (1266)
Q Consensus 170 ~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr--~~gSyIYEEFI 246 (1266)
+..+++.-. .|+|+||+.|. .|.|+.+ ++. ....+... .... ....|++|+||
T Consensus 145 ----~~~~~~~~~-----g~vVvKPl~G~-----------~G~gv~~-v~~---~~~~~~~~~~~~~~~~~~~~~vQ~yI 200 (312)
T TIGR01380 145 ----EIRAFLAEH-----GDIVLKPLDGM-----------GGEGIFR-LDP---GDPNFNSILETMTQRGREPVMAQRYL 200 (312)
T ss_pred ----HHHHHHHHc-----CCEEEEECCCC-----------CCceEEE-EcC---CCccHHHHHHHHHhccCCcEEEEecc
Confidence 111222211 37999999997 4667743 221 11111100 0111 24589999999
Q ss_pred CC-CCceEEEEEECCcee-EEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHH---HHhCCccceeeEEeeCC
Q psy10158 247 PT-DGTDVKVYTVGPDYA-HAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVC---LAFKQTVCGFDLLRANG 321 (1266)
Q Consensus 247 ~t-~GtDVKVYtVGp~~v-hAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaa---kAFGq~VCGfDLLRs~g 321 (1266)
+. ++.|+||++||++++ ||+.|.++ +|+||.|.+.|+...+++||++|+++|.+++ +++|+.+||||||
T Consensus 201 ~~~~~~D~Rv~vv~g~vv~~ai~R~~~--~gd~r~N~~~Gg~~~~~~l~~e~~~ia~~~~~~~~~~gl~~agVDii---- 274 (312)
T TIGR01380 201 PEIKEGDKRILLIDGEPIGAAVARIPA--GGEFRGNLAVGGRGEATELSERDREICADVAPELKRRGLLFVGIDVI---- 274 (312)
T ss_pred ccccCCCEEEEEECCeEEEEEEEecCC--CCCccccccCCceeeccCCCHHHHHHHHHHHHHHHhcCCcEEEEEEe----
Confidence 96 678999999999975 69999885 7899999999999999999999999999998 7789999999999
Q ss_pred CeEEEeecC
Q psy10158 322 KSFVCDVNG 330 (1266)
Q Consensus 322 gsyVcDVNG 330 (1266)
++||+|||.
T Consensus 275 g~~v~EvN~ 283 (312)
T TIGR01380 275 GGYLTEVNV 283 (312)
T ss_pred CCEEEEEec
Confidence 479999995
|
This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions. |
| >PRK12458 glutathione synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-20 Score=205.11 Aligned_cols=200 Identities=15% Similarity=0.177 Sum_probs=149.2
Q ss_pred ccccccceeeccccCCCcHH--HHH--------HHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCC
Q psy10158 95 DEWPIVDCLISFHSKGFPLE--KAI--------KYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRES 164 (1266)
Q Consensus 95 E~WP~cD~LIsFfS~GfPL~--KAi--------~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~ 164 (1266)
-.|..+|+|+.+---.|... ..+ ++++..+.+++|+........||+..+++++ +++|.|++.....
T Consensus 75 ~~l~~~d~V~~R~~~~~~~~~~~~l~~~~~~~~~~~e~~g~~viN~p~~i~~~~dK~~~~~l~~---~~vP~T~v~~~~~ 151 (338)
T PRK12458 75 LPLAGFDVIFLRANPPLDPLARNWADSVGIAFGRLAARDGVLVVNDPDGLRIANNKLYFQSFPE---EVRPTTHISRNKE 151 (338)
T ss_pred CchhhCCEEEEeCCCCCChHHHHHHHHhchhHHHHHHhCCCeEecCHHHHHhccCHHHHHhhcc---CCCCCEEEeCCHH
Confidence 35888999998875555432 222 2225668899999999999999999876554 7899999875311
Q ss_pred CCCccccccccCCeE-EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccC--CccccccCCcccccCcceE
Q psy10158 165 PDPVKHELVESEDHV-EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIG--SRSSVYSPESRVRKSGSFI 241 (1266)
Q Consensus 165 ~~~~~~~l~e~~D~I-~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKig--nkSS~y~p~s~vr~~gSyI 241 (1266)
+..+++ ..++ .|+|+||++|. .|.|+. ++..-. |..+.+. .+...+.+|
T Consensus 152 ---------~~~~~~~~~~~----~pvVvKPl~G~-----------gG~gV~-~v~~~~~~~~~~ile---~~~~~~~~i 203 (338)
T PRK12458 152 ---------YIREFLEESPG----DKMILKPLQGS-----------GGQGVF-LIEKSAQSNLNQILE---FYSGDGYVI 203 (338)
T ss_pred ---------HHHHHHHHcCC----CeEEEEECCCC-----------CccCeE-EEecCChhhHHHHHH---HHhhCCCEE
Confidence 111222 2333 46999999997 466764 332111 0001111 122366899
Q ss_pred EeeccCC-CCceEEEEEECCcee------EEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh---CCcc
Q psy10158 242 YEDFMPT-DGTDVKVYTVGPDYA------HAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF---KQTV 311 (1266)
Q Consensus 242 YEEFI~t-~GtDVKVYtVGp~~v------hAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF---Gq~V 311 (1266)
+||||+. ++-|+||++||++++ ||+.|.+. .|+||.|.+-|+...++.||++++++|.+++.++ |+.+
T Consensus 204 vQeyI~~~~~gDiRv~vv~g~~v~~~g~~~a~~R~~~--~~d~RsN~~~Gg~~~~~~l~~~~~~ia~~~~~~l~~~GL~~ 281 (338)
T PRK12458 204 AQEYLPGAEEGDVRILLLNGEPLERDGHYAAMRRVPA--GGDVRSNVHAGGSVVKHTLTKEELELCEAIRPKLVRDGLFF 281 (338)
T ss_pred EEEcccCCCCCCEEEEEECCEEEeeccceeEEEEecC--CCCeeecccCCCcccCcCCCHHHHHHHHHHHHHHhhcCCeE
Confidence 9999995 668999999999999 99999884 6899999999999999999999999999999988 9999
Q ss_pred ceeeEEeeCCCeEEEeecCc
Q psy10158 312 CGFDLLRANGKSFVCDVNGF 331 (1266)
Q Consensus 312 CGfDLLRs~ggsyVcDVNGw 331 (1266)
|||||+ +.+|+|||..
T Consensus 282 ~gVDli----~~~l~EIN~~ 297 (338)
T PRK12458 282 VGLDIV----GDKLVEVNVF 297 (338)
T ss_pred EeEEEE----CCEEEEEeCC
Confidence 999999 4689999943
|
|
| >TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.5e-17 Score=179.70 Aligned_cols=180 Identities=12% Similarity=0.120 Sum_probs=130.1
Q ss_pred ccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE-EEcCeEecCCEEEecccccCcceEEEe
Q psy10158 128 INNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV-EVNGIVFNKPFVEKPVSAEDHNIYIYY 206 (1266)
Q Consensus 128 lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I-~v~G~~~~kPfVeKpv~GedHNI~IYy 206 (1266)
.|+=+--.++.||..+.++|.++|||+|+|..+...... .++.. .+.+ ..|+|+||++|+
T Consensus 26 ~N~r~~~~~~~DK~~t~~lL~~aglpvP~T~~~~s~~~~--------~~~l~~~~~~---~~~VVVKPl~Gs-------- 86 (317)
T TIGR02291 26 YNKRSLYPLVDDKLKTKIIAQAAGITVPELYGVIHNQAE--------VKTIHNIVKD---HPDFVIKPAQGS-------- 86 (317)
T ss_pred cCCchhccccccHHHHHHHHHHcCCCCCCEEEecCchhh--------HHHHHHHHcc---CCCEEEEECCCC--------
Confidence 577778889999999999999999999998877532110 11111 2222 257999999999
Q ss_pred ccCCCCchhhhhcccCCcc------ccccCC---c-------cc-ccC--cceEEeeccCC-----------CCceEEEE
Q psy10158 207 PTSAGGGSQRLFRKIGSRS------SVYSPE---S-------RV-RKS--GSFIYEDFMPT-----------DGTDVKVY 256 (1266)
Q Consensus 207 p~s~GgGv~~LfrKignkS------S~y~p~---s-------~v-r~~--gSyIYEEFI~t-----------~GtDVKVY 256 (1266)
+|.|+. +.+...+.. ..+.++ . .+ ... ..+.|+||+.. .+.||||+
T Consensus 87 ---~GrGI~-~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ly~l~~~~~~~lvE~~i~~~~~~~~~~~~~v~diRV~ 162 (317)
T TIGR02291 87 ---GGKGIL-VITSRKDGRYRKPSGATINKEEIERHVSNILAGLYSLGGKNDVALIEYRVKFDPCFDGFSYEGVPDIRII 162 (317)
T ss_pred ---CccCeE-EEEeccccccccccccccchHHHHHHHHHHHHHHHhccCCCcEEEEEeeccCCcchhccccCCCCCEEEE
Confidence 699984 554321110 000100 0 00 112 22344455422 23899999
Q ss_pred EECCceeEEeeccCCCCCCceeecCCCCceeeEeeCC--------------------------------HHHHHHHHHHH
Q psy10158 257 TVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILS--------------------------------NAEKLISRKVC 304 (1266)
Q Consensus 257 tVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT--------------------------------~eEK~IA~kaa 304 (1266)
|||++.++||.|.+. -.|.++.|.|.|++..+|.|. ++-.++|.+|+
T Consensus 163 vv~~~~vaa~~R~~~-~~~~~~tN~~~Gg~~~~vdl~tG~l~~~~~~~~~~~~HP~t~~~~~g~~ip~~~el~~la~~A~ 241 (317)
T TIGR02291 163 VFKGYPVMAMMRLPT-RASDGKANLHQGAVGVGIDLATGKTIRAVWFNQPITHHPDTGKDLSGLQVPHWERLLELAASCW 241 (317)
T ss_pred EECCEEEEEEEEccC-ccCCcccccccCCceeeeecCCCccccccccCCccccCCCcccccccCCChhHHHHHHHHHHHH
Confidence 999999999999762 257799999999999999986 67779999999
Q ss_pred HHhCCccceeeEEee-CCCeEEEeecCc
Q psy10158 305 LAFKQTVCGFDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 305 kAFGq~VCGfDLLRs-~ggsyVcDVNGw 331 (1266)
+++|+.++|+|++.. +++++|+|||+-
T Consensus 242 ~~~g~~~~GvDii~~~~~g~~VlEVN~~ 269 (317)
T TIGR02291 242 ELTGLGYMGVDMVLDKEEGPLVLELNAR 269 (317)
T ss_pred HhcCCCeEEEEEEEeCCCCEEEEEeCCC
Confidence 999999999999986 789999999964
|
Members of this protein family contain a region of homology to the RimK family of alpha-L-glutamate ligases (TIGR00768), various members of which modify the Glu-Glu C-terminus of ribosomal protein S6, or tetrahydromethanopterin, or a form of coenzyme F420 derivative. Members of this family are found so far in various Vibrio and Pseudomonas species and some other gamma and beta Proteobacteria. The function is unknown. |
| >cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.7e-16 Score=163.08 Aligned_cols=62 Identities=53% Similarity=0.656 Sum_probs=53.7
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccC
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEG 592 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEg 592 (1266)
|+||+.|+.|+.+||+.||..|+.. +.+......++.|+||+..||+.||++|+.||+.-.+
T Consensus 17 ~~LT~~G~~q~~~~G~~lr~~y~~~-------~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl~~~~~ 78 (242)
T cd07061 17 GELTPFGRQQAFELGRYFRQRYGEL-------LLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGLFPPDG 78 (242)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHh-------cccccCCCCeeEEEECCCcHHHHHHHHHHHhcCCCcc
Confidence 8999999999999999999988863 2224556689999999999999999999999998554
|
Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been |
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-16 Score=186.63 Aligned_cols=174 Identities=17% Similarity=0.295 Sum_probs=130.8
Q ss_pred cccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEe
Q psy10158 127 VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYY 206 (1266)
Q Consensus 127 ~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYy 206 (1266)
.+|...+..+..||..+.++|+++|||+|.+.++.... +..+++.- +. |+|+||++|.
T Consensus 285 ~~~s~~ai~~~~DK~~tk~lL~~aGIpVP~~~~~~~~~---------~~~~~~~~----~G-~vVVKP~~G~-------- 342 (547)
T TIGR03103 285 ELTSAVAMSLCDDKRLTRRLVSEAGLQVPEQQLAGNGE---------AVEAFLAE----HG-AVVVKPVRGE-------- 342 (547)
T ss_pred CCCCHHHHHHhcCHHHHHHHHHHcCcCCCCEEEECCHH---------HHHHHHHH----hC-CEEEEECCCC--------
Confidence 44666777888999999999999999999999986311 11112211 22 6999999997
Q ss_pred ccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCC--CCc-------
Q psy10158 207 PTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPAL--DGK------- 276 (1266)
Q Consensus 207 p~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvv--DG~------- 276 (1266)
+|.|+. + .+.+....-..- ...+....+|.|+||+ |.|+||+|||+++++|+.|..|-+ ||.
T Consensus 343 ---~G~Gv~-v--~v~~~~eL~~a~~~a~~~~~~vlvEe~i~--G~d~Rv~Vigg~vvaa~~R~~~~V~GDG~~ti~~Li 414 (547)
T TIGR03103 343 ---QGKGIS-V--DVRTPDDLEAAIAKARQFCDRVLLERYVP--GEDLRLVVIDFEVVAAAVRRPPEVIGDGRSSIRDLI 414 (547)
T ss_pred ---CCcCeE-E--ecCCHHHHHHHHHHHHhcCCcEEEEEecc--CCeEEEEEECCEEEEEEEecCcEEEeCCccCHHHHH
Confidence 588874 3 122222111100 0112355899999994 899999999999999999998843 552
Q ss_pred -----------------------------------------------eeecCCCCceeeEe--eCCHHHHHHHHHHHHHh
Q psy10158 277 -----------------------------------------------VERDSEGKEIRYPV--ILSNAEKLISRKVCLAF 307 (1266)
Q Consensus 277 -----------------------------------------------VRRN~hgKEiRypV--~LT~eEK~IA~kaakAF 307 (1266)
.+.|+|-|+....| .+.++.+++|.++|+++
T Consensus 415 e~~n~~~~~~~~~~~~i~~d~~~~~~l~~~g~~~~~V~~~G~~v~l~~~~Nl~tGg~~~dvtd~~~~~~~~~A~~aa~~~ 494 (547)
T TIGR03103 415 EKQSRRRAAATGGESRIPLDAETERCLAEAGLDLDDVLPEGQRLRVRRTANLHTGGTIHDVTEQLHPDLREAAERAARAL 494 (547)
T ss_pred HHHhcCccCCCCCcCccCCCHHHHHHHHHcCCCccccCCCCCEEEEecCCcccCCCeeEecccccCHHHHHHHHHHHHHh
Confidence 15788888888888 79999999999999999
Q ss_pred CCccceeeEEeeC-CCe--EEEeecC
Q psy10158 308 KQTVCGFDLLRAN-GKS--FVCDVNG 330 (1266)
Q Consensus 308 Gq~VCGfDLLRs~-ggs--yVcDVNG 330 (1266)
|+.|||||||..+ .+| +|||||.
T Consensus 495 gl~~~GvD~i~~~~~~p~~~iiEvN~ 520 (547)
T TIGR03103 495 DIPVVGIDFLVPDVTGPDYVIIEANE 520 (547)
T ss_pred CCCeEEEEEEeccCCCCCeEEEEecC
Confidence 9999999999864 556 9999994
|
Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein. |
| >PRK01372 ddl D-alanine--D-alanine ligase; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-14 Score=155.33 Aligned_cols=245 Identities=15% Similarity=0.126 Sum_probs=165.6
Q ss_pred eEEEEEEe------cCCccCChhHHHHHHHHhhcCcEEEEEec-ccccccccccccccceeeccccCCCcHH-HHHHHHh
Q psy10158 50 QVIVGVCA------MAKKSQSKPMKEILTRLEEFEFIKMIVFS-EETIQKPVDEWPIVDCLISFHSKGFPLE-KAIKYAN 121 (1266)
Q Consensus 50 ~i~iGVCA------Md~Ka~SkPMr~IL~RL~~~g~f~viiF~-dkvILe~vE~WP~cD~LIsFfS~GfPL~-KAi~Y~k 121 (1266)
+++|+||+ -+....|. +.|++=|.+.| +++++.. ++.+++-+ .|..+|+++..+...+..+ .+-++++
T Consensus 4 ~~~v~~~~g~~~~~~~~~~~s~--~~i~~al~~~g-~~v~~i~~~~~~~~~~-~~~~~D~v~~~~~g~~~~~~~~~~~le 79 (304)
T PRK01372 4 FGKVAVLMGGTSAEREVSLNSG--AAVLAALREAG-YDAHPIDPGEDIAAQL-KELGFDRVFNALHGRGGEDGTIQGLLE 79 (304)
T ss_pred CcEEEEEeCCCCCCceEeHHhH--HHHHHHHHHCC-CEEEEEecCcchHHHh-ccCCCCEEEEecCCCCCCccHHHHHHH
Confidence 45788887 44444443 67777777755 4555553 33333322 2457899998876545442 3445566
Q ss_pred hcCCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCc
Q psy10158 122 LRKPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDH 200 (1266)
Q Consensus 122 lrkp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedH 200 (1266)
..+...+ ++.....+..||....++|+++|||+|++..+..... ....+. .+..|+|+||..|.
T Consensus 80 ~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gIp~p~~~~~~~~~~---------~~~~~~----~~~~P~ivKP~~g~-- 144 (304)
T PRK01372 80 LLGIPYTGSGVLASALAMDKLRTKLVWQAAGLPTPPWIVLTREED---------LLAAID----KLGLPLVVKPAREG-- 144 (304)
T ss_pred HcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEEeCcch---------HHHHHh----hcCCCEEEeeCCCC--
Confidence 6665555 5578888999999999999999999999999864211 111111 23489999999986
Q ss_pred ceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCC--ce
Q psy10158 201 NIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDG--KV 277 (1266)
Q Consensus 201 NI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG--~V 277 (1266)
.|.|+. + +.|....... +.....+..+|.||||+ |.++.|.++|+.+.++..+..+ .| .+
T Consensus 145 ---------~s~Gv~-~---v~~~~el~~~~~~~~~~~~~~lvEe~i~--G~E~~v~vi~~~~~~~~~~~~~--~~~~~~ 207 (304)
T PRK01372 145 ---------SSVGVS-K---VKEEDELQAALELAFKYDDEVLVEKYIK--GRELTVAVLGGKALPVIEIVPA--GEFYDY 207 (304)
T ss_pred ---------CCCCEE-E---eCCHHHHHHHHHHHHhcCCcEEEEcccC--CEEEEEEEECCCccceEEEEec--CCEEee
Confidence 355553 2 2222211100 00112357799999997 8999999999999888877663 33 35
Q ss_pred eecCCCCceeeEe--eCCHHH----HHHHHHHHHHhCCc-cceeeEEeeC-CCeEEEeecC
Q psy10158 278 ERDSEGKEIRYPV--ILSNAE----KLISRKVCLAFKQT-VCGFDLLRAN-GKSFVCDVNG 330 (1266)
Q Consensus 278 RRN~hgKEiRypV--~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs~-ggsyVcDVNG 330 (1266)
+.+.+.++..+.+ .+++++ +++|.+++++||.. +|+||++..+ |++||+|||.
T Consensus 208 ~~~~~~g~~~~~~p~~~~~~~~~~l~~~a~~~~~~lg~~g~~~iD~~~~~~g~~~viEvN~ 268 (304)
T PRK01372 208 EAKYLAGGTQYICPAGLPAEIEAELQELALKAYRALGCRGWGRVDFMLDEDGKPYLLEVNT 268 (304)
T ss_pred eccccCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEcCCCCEEEEEecC
Confidence 6677766554443 577654 57899999999984 8999999986 7899999995
|
|
| >TIGR02068 cya_phycin_syn cyanophycin synthetase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.7e-15 Score=184.01 Aligned_cols=172 Identities=17% Similarity=0.263 Sum_probs=128.0
Q ss_pred CccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccC
Q psy10158 130 NLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTS 209 (1266)
Q Consensus 130 dl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s 209 (1266)
...+..+.+||..+.++|+++|||+|++.++.... +..+.+. .+..|+|+||.+|.
T Consensus 204 s~ia~~ia~DK~~tk~lL~~~GIpvP~~~~~~s~~---------ea~~~~~----~ig~PvVVKP~~g~----------- 259 (864)
T TIGR02068 204 SAIAVEIACDKDLTKEILSDAGVPVPEGTVVQSAE---------DAWEAAQ----DLGYPVVIKPYDGN----------- 259 (864)
T ss_pred cHHHHHHHcCHHHHHHHHHHcCcCCCCEEEECCHH---------HHHHHHH----HcCCCEEEEECCCC-----------
Confidence 44566788999999999999999999998885311 1111221 12389999999997
Q ss_pred CCCchhhhhcccCCccccccCCcc-cccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCC-------------
Q psy10158 210 AGGGSQRLFRKIGSRSSVYSPESR-VRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDG------------- 275 (1266)
Q Consensus 210 ~GgGv~~LfrKignkSS~y~p~s~-vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG------------- 275 (1266)
+|.|+. + ++.+....-..-.. ......+|+|+||+ |.|+||+|||+++++|+.|.+|.|-|
T Consensus 260 ~G~GV~-l--~v~s~~el~~a~~~a~~~~~~vlVEefI~--G~e~rvlVv~~~vvaa~~R~p~~V~GdG~~ti~eLi~~~ 334 (864)
T TIGR02068 260 HGRGVT-I--NILTRDEIESAYEAAVEESSGVIVERFIT--GRDHRLLVVGGKVVAVAERVPAHVIGDGVHTIEELIEQI 334 (864)
T ss_pred CccCEE-E--EeCCHHHHHHHHHHHHhhCCcEEEEEecc--CCEEEEEEECCEEEEEEEecCCceecCccccHHHHHHHh
Confidence 477874 3 12222111110001 12356799999996 89999999999999999999997644
Q ss_pred -----------------------------------------c---e--eecCCCCceeeEe--eCCHHHHHHHHHHHHHh
Q psy10158 276 -----------------------------------------K---V--ERDSEGKEIRYPV--ILSNAEKLISRKVCLAF 307 (1266)
Q Consensus 276 -----------------------------------------~---V--RRN~hgKEiRypV--~LT~eEK~IA~kaakAF 307 (1266)
+ + ++|++.|+...-| .++++.+++|.++|+++
T Consensus 335 n~~p~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~sV~~~g~~v~l~~~~Nls~Gg~~~d~td~i~~~~~~~a~~aa~~~ 414 (864)
T TIGR02068 335 NTDPLRGDGHDKPLTKIRLDSTARLELAKQGLTLDSVPAKGRIVYLRATANLSTGGVAIDRTDEIHPENAATAVRAAKII 414 (864)
T ss_pred ccCcccCccccCCccccCCCHHHHHHHHHcCCCccccCCCCCEEEEeccccccCCCceEecccccCHHHHHHHHHHHHHh
Confidence 1 3 5678888888877 99999999999999999
Q ss_pred CCccceeeEEee--------CCCeEEEeecCc
Q psy10158 308 KQTVCGFDLLRA--------NGKSFVCDVNGF 331 (1266)
Q Consensus 308 Gq~VCGfDLLRs--------~ggsyVcDVNGw 331 (1266)
|++||||||+-. +++ .|||||+=
T Consensus 415 gl~i~gvD~i~~di~~~~~~~~~-~iiEvN~~ 445 (864)
T TIGR02068 415 GLDIAGVDIVTEDISRPLRDTDG-AIVEVNAA 445 (864)
T ss_pred CCCeEEEEEEecCCCCCccccCc-EEEEEcCC
Confidence 999999999753 333 79999964
|
Cyanophycin synthesis is analogous to polyhydroxyalkanoic acid (PHA) biosynthesis, except that PHA polymers lack nitrogen and may be made under nitrogen-limiting conditions. |
| >PRK14016 cyanophycin synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-14 Score=174.99 Aligned_cols=180 Identities=19% Similarity=0.306 Sum_probs=133.0
Q ss_pred cccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEe
Q psy10158 127 VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYY 206 (1266)
Q Consensus 127 ~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYy 206 (1266)
..+...+..++.||..+.++|+++|||+|++.++.... +..+.+ ..+..|+|+||.+|.
T Consensus 202 ~~~s~~a~~i~~DK~~tk~lL~~~GIPvP~~~~v~s~~---------~a~~~a----~~iG~PvVVKP~~G~-------- 260 (727)
T PRK14016 202 DQTSAIAVDIACDKELTKRLLAAAGVPVPEGRVVTSAE---------DAWEAA----EEIGYPVVVKPLDGN-------- 260 (727)
T ss_pred CCCcHHHHHHhCCHHHHHHHHHHCCcCCCCeeEeCCHH---------HHHHHH----HHcCCCEEEEECCCC--------
Confidence 45666677889999999999999999999998875311 011111 123499999999997
Q ss_pred ccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCC--CCc-------
Q psy10158 207 PTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPAL--DGK------- 276 (1266)
Q Consensus 207 p~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvv--DG~------- 276 (1266)
.|.|+. + ++.+....-.. +...+....+|+||||+ |.|+||++||+++++|+.|..|-+ ||.
T Consensus 261 ---~G~GV~-~--~v~~~~el~~a~~~a~~~~~~viVEe~I~--G~d~Rv~Vvgg~vvaa~~r~~~~v~GDG~~ti~~Li 332 (727)
T PRK14016 261 ---HGRGVT-V--NITTREEIEAAYAVASKESSDVIVERYIP--GKDHRLLVVGGKLVAAARREPPHVIGDGKHTIRELI 332 (727)
T ss_pred ---CCCceE-E--ecCCHHHHHHHHHHHHHhCCeEEEEEecC--CceEEEEEECCEEEEEEEecCcEEecCCcccHHHHH
Confidence 477774 3 12222111000 00112356899999996 899999999999999999999854 332
Q ss_pred ------------------------------------------------ee--ecCCCCceeeEee--CCHHHHHHHHHHH
Q psy10158 277 ------------------------------------------------VE--RDSEGKEIRYPVI--LSNAEKLISRKVC 304 (1266)
Q Consensus 277 ------------------------------------------------VR--RN~hgKEiRypV~--LT~eEK~IA~kaa 304 (1266)
+| .|.+.|+....+. ++++-+++|.+||
T Consensus 333 ~~~n~~p~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~sV~~~G~~v~l~~~~N~s~Gg~~~d~td~i~~~~~~~a~~aa 412 (727)
T PRK14016 333 EIVNQDPRRGEGHEKPLTKIKLDDIALLELAKQGYTLDSVPPKGEKVYLRRNANLSTGGTAIDVTDEVHPENAAIAERAA 412 (727)
T ss_pred HHhhcCccccccccCcccccCCCHHHHHHHHHcCCCccccCCCCCEEEEeccccccCCCeeEecccccCHHHHHHHHHHH
Confidence 23 3888888888886 9999999999999
Q ss_pred HHhCCccceeeEEeeC-------CCeEEEeecCceecc
Q psy10158 305 LAFKQTVCGFDLLRAN-------GKSFVCDVNGFSFVK 335 (1266)
Q Consensus 305 kAFGq~VCGfDLLRs~-------ggsyVcDVNGwSFVK 335 (1266)
+++|++||||||+..+ .+-.|||||.=.=++
T Consensus 413 ~~~gl~~~GvDi~~~di~~p~~~~~~~iiEvN~sPgi~ 450 (727)
T PRK14016 413 KIIGLDIAGVDVVCEDISKPLEEQGGAIVEVNAAPGLR 450 (727)
T ss_pred HhcCCCEEEEEEEecCcccccccCCcEEEEEcCCcchh
Confidence 9999999999998853 456999999764443
|
|
| >PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=166.67 Aligned_cols=177 Identities=19% Similarity=0.251 Sum_probs=123.3
Q ss_pred cccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE-EEcCeEecCCEEEecccccCcceEEE
Q psy10158 127 VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV-EVNGIVFNKPFVEKPVSAEDHNIYIY 205 (1266)
Q Consensus 127 ~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I-~v~G~~~~kPfVeKpv~GedHNI~IY 205 (1266)
..|...+-.+.+||..+.++|+++|||+|++..+.... +..+.+ .+.| .|+|+||++|.
T Consensus 476 ~~~s~~s~~~~~DK~~tk~lL~~~GIpvP~~~~~~~~e---------~a~~~~~~~~g----~PvVVKP~~g~------- 535 (752)
T PRK02471 476 SKDNYISPLIMENKVVTKKILAEAGFPVPAGDEFTSLE---------EALADYSLFAD----KAIVVKPKSTN------- 535 (752)
T ss_pred CCCHHHHHHHhhCHHHHHHHHHHCCcCCCCEEEEcCHH---------HHHHHHHHhcC----CCEEEEECCCC-------
Confidence 33444445577899999999999999999998875311 111112 2234 89999999998
Q ss_pred eccCCCCchhhhhcccCCccccccCCc-ccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCC--CCc--ee--
Q psy10158 206 YPTSAGGGSQRLFRKIGSRSSVYSPES-RVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPAL--DGK--VE-- 278 (1266)
Q Consensus 206 yp~s~GgGv~~LfrKignkSS~y~p~s-~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvv--DG~--VR-- 278 (1266)
.|.|+. +++.+.+.......-. ..+.+..+|.||||+ |.|+||+|||+++++|+.|.++.| ||+ ++
T Consensus 536 ----~G~GV~-~~~~~~~~eel~~A~~~a~~~~~~vlVEEfI~--G~E~Rv~Viggkvvaa~~R~pa~V~GDG~~tI~eL 608 (752)
T PRK02471 536 ----FGLGIS-IFKEPASLEDYEKALEIAFREDSSVLVEEFIV--GTEYRFFVLDGKVEAVLLRVPANVVGDGIHTVREL 608 (752)
T ss_pred ----CcCCeE-EecCcCCHHHHHHHHHHHHhcCCcEEEEeccc--CCEEEEEEECCEEEEEEEEeCCccccCcHhhHHHH
Confidence 688984 7765544333222111 123466799999995 999999999999999999999966 454 10
Q ss_pred ---ec--------------------------------------------------CCCCceeeE--eeCCHHHHHHHHHH
Q psy10158 279 ---RD--------------------------------------------------SEGKEIRYP--VILSNAEKLISRKV 303 (1266)
Q Consensus 279 ---RN--------------------------------------------------~hgKEiRyp--V~LT~eEK~IA~ka 303 (1266)
.| ++-|+...- -.+.++-+++|.+|
T Consensus 609 i~~~n~~p~Rg~~~~~~l~~I~~d~~~~~~L~~qg~~l~sVp~~Ge~v~L~~~~NlstGg~~~dvtd~ih~~~~~lA~~a 688 (752)
T PRK02471 609 VAQKNQDPLRGTDHRTPLEKIQLGEIERLMLKQQGLTPDSIPKKGEIVYLRENSNISTGGDSIDMTDDMDDSYKQIAVKA 688 (752)
T ss_pred HHHhcCCccccCcccccccccccCHHHHHHHHHcCCCccccCCCCCEEEecCCCccCCCCeeEecccccCHHHHHHHHHH
Confidence 11 111221111 14556778999999
Q ss_pred HHHhCCccceeeEEeeC-------C--CeEEEeecC
Q psy10158 304 CLAFKQTVCGFDLLRAN-------G--KSFVCDVNG 330 (1266)
Q Consensus 304 akAFGq~VCGfDLLRs~-------g--gsyVcDVNG 330 (1266)
|+++|+.||||||+-.+ . +-.|||||+
T Consensus 689 a~~igl~~~GvDii~~di~~p~~~~~~~~~IiEvN~ 724 (752)
T PRK02471 689 AKALGAKICGVDLIIPDLTQPASPEHPNYGIIELNF 724 (752)
T ss_pred HHhcCCCEEEEEEEeCCCcccccccCCCeEEEEecC
Confidence 99999999999999643 1 557899996
|
|
| >TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.7e-12 Score=136.82 Aligned_cols=208 Identities=16% Similarity=0.173 Sum_probs=132.5
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcCCcccc-CccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRKPFVIN-NLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrkp~~lN-dl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++++..--.+.. ..+.+.++..+.+.+| +.....+.+||....++|+++|||+|++..+.++..+.. ++. ..
T Consensus 63 ~~D~v~~~~~g~~~~~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~--~~~-~~ 139 (315)
T TIGR01205 63 GIDVVFPVLHGRYGEDGTIQGLLELMGIPYTGSGVLASALSMDKLLTKLLWKALGLPTPDYIVLTQNRASAD--ELE-CE 139 (315)
T ss_pred CCCEEEEecCCCCCCCcHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEecccccch--hhh-HH
Confidence 479998854222222 3566777888866665 588999999999999999999999999998862211000 000 00
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
... ..+..|+|+||..|. .|.|+. ++.|....... +.....+..+|+||||+ |.++.|
T Consensus 140 ~~~----~~~~~P~vvKP~~~~-----------~s~Gv~----~v~~~~el~~~~~~~~~~~~~~lvEe~i~--G~e~~v 198 (315)
T TIGR01205 140 QVA----EPLGFPVIVKPAREG-----------SSVGVS----KVKSEEELQAALDEAFEYDEEVLVEQFIK--GRELEV 198 (315)
T ss_pred HHH----HhcCCCEEEEeCCCC-----------CccCEE----EECCHHHHHHHHHHHHhcCCcEEEEcCCC--CEEEEE
Confidence 000 123589999999986 345552 22222211110 00112356799999995 999999
Q ss_pred EEEC-CceeEEeeccCCCC-CCceeecCCCCceee--EeeCCHHH----HHHHHHHHHHhCC-ccceeeEEeeC-CCeEE
Q psy10158 256 YTVG-PDYAHAEARKSPAL-DGKVERDSEGKEIRY--PVILSNAE----KLISRKVCLAFKQ-TVCGFDLLRAN-GKSFV 325 (1266)
Q Consensus 256 YtVG-p~~vhAe~RKSPvv-DG~VRRN~hgKEiRy--pV~LT~eE----K~IA~kaakAFGq-~VCGfDLLRs~-ggsyV 325 (1266)
.++| +.....+.+-.... --.+..+.+.++..+ |..|++++ +++|.++++++|. .+|+||++... |++||
T Consensus 199 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~v 278 (315)
T TIGR01205 199 SILGNEEALPIIEIVPEIEGFYDYEAKYLDGSTEYVIPAPLDEELEEKIKELALKAYKALGCRGLARVDFFLDEEGEIYL 278 (315)
T ss_pred EEECCCCccceEEecCCCCCeeCcccccCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEE
Confidence 9999 54333333322110 001333434444443 34577765 7899999999998 69999999885 57999
Q ss_pred EeecC
Q psy10158 326 CDVNG 330 (1266)
Q Consensus 326 cDVNG 330 (1266)
+|||.
T Consensus 279 iEvN~ 283 (315)
T TIGR01205 279 NEINT 283 (315)
T ss_pred EEeeC
Confidence 99995
|
but a number of antibiotic resistance proteins score above the trusted cutoff of this model. |
| >PRK14571 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.8e-11 Score=131.82 Aligned_cols=231 Identities=16% Similarity=0.211 Sum_probs=152.0
Q ss_pred hhHHHHHHHHhhcCcEEEEEecccc-cccccccccccceeeccccCCCcH-HHHHHHHhhcCCccc-cCccchhhhhHHH
Q psy10158 65 KPMKEILTRLEEFEFIKMIVFSEET-IQKPVDEWPIVDCLISFHSKGFPL-EKAIKYANLRKPFVI-NNLNMQYDIQDRR 141 (1266)
Q Consensus 65 kPMr~IL~RL~~~g~f~viiF~dkv-ILe~vE~WP~cD~LIsFfS~GfPL-~KAi~Y~klrkp~~l-Ndl~~Q~ilrDRr 141 (1266)
+--++|++=|.+.|. +++.+.... .+..+.....+|+++......+-. ..+.++++..+.+.+ ++..+..+.+||.
T Consensus 19 ~s~~~i~~al~~~g~-~~~~i~~~~~~~~~~~~~~~~D~v~~~~~g~~ge~~~~~~~le~~gip~~G~~~~a~~i~~DK~ 97 (299)
T PRK14571 19 RSGERVKKALEKLGY-EVTVFDVDEDFLKKVDQLKSFDVVFNVLHGTFGEDGTLQAILDFLGIRYTGSDAFSSMICFDKL 97 (299)
T ss_pred HHHHHHHHHHHHcCC-eEEEEccCchHHHHhhhccCCCEEEEeCCCCCCCccHHHHHHHHcCCCccCCCHHHHHHHcCHH
Confidence 555778888877654 455554332 223333345689998876443333 456677777775555 6689999999999
Q ss_pred HHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhccc
Q psy10158 142 KVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKI 221 (1266)
Q Consensus 142 ~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKi 221 (1266)
.+.++|+ +|||+|++..+.... . ...+..|+|+||.+|. .|.|+. + +
T Consensus 98 ~~k~~l~-~~ip~p~~~~~~~~~---------~--------~~~l~~P~vvKP~~g~-----------~s~Gv~-~---v 144 (299)
T PRK14571 98 LTYRFLK-GTVEIPDFVEIKEFM---------K--------TSPLGYPCVVKPRREG-----------SSIGVF-I---C 144 (299)
T ss_pred HHHHHHh-cCCCCCCEEEEechh---------h--------hhhcCCCEEEecCCCC-----------CcCCEE-E---E
Confidence 9999998 589999998884310 0 1124589999999986 355664 2 2
Q ss_pred CCccccccC-CcccccCcceEEeeccCCCCceEEEEEECCc---eeEEeeccCCCCCCc--eeecCCCCceee--EeeCC
Q psy10158 222 GSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKVYTVGPD---YAHAEARKSPALDGK--VERDSEGKEIRY--PVILS 293 (1266)
Q Consensus 222 gnkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~---~vhAe~RKSPvvDG~--VRRN~hgKEiRy--pV~LT 293 (1266)
.|....... ....+....+|.||||+ |.++.|-++|.. .+.+....-|. ++. +..+.++++..+ |..|+
T Consensus 145 ~~~~el~~~~~~~~~~~~~vlVEeyI~--G~E~sv~vl~~~~~~~vl~~~e~~~~-~~~~~~~~k~~~g~~~~~~p~~l~ 221 (299)
T PRK14571 145 ESDEEFQHALKEDLPRYGSVIVQEYIP--GREMTVSILETEKGFEVLPILELRPK-RRFYDYVAKYTKGETEFILPAPLN 221 (299)
T ss_pred CCHHHHHHHHHHHHhhCCcEEEEcccc--ceEEEEEEEcCCCCeeeeceEEEecC-CCccccccccCCCCeeEEeCCCCC
Confidence 222211110 01122356799999996 899999999853 35555433221 211 233444444443 55687
Q ss_pred HHH----HHHHHHHHHHhCC-ccceeeEEeeCCCeEEEeecCce
Q psy10158 294 NAE----KLISRKVCLAFKQ-TVCGFDLLRANGKSFVCDVNGFS 332 (1266)
Q Consensus 294 ~eE----K~IA~kaakAFGq-~VCGfDLLRs~ggsyVcDVNGwS 332 (1266)
++. +++|.++++++|. .+|+||++-.+|++||+|||.--
T Consensus 222 ~~~~~~i~~~a~~~~~~lg~~g~~rvD~~~~~~~~~viEiN~~P 265 (299)
T PRK14571 222 PEEERLVKETALKAFVEAGCRGFGRVDGIFSDGRFYFLEINTVP 265 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEEEECCcEEEEEeeCCC
Confidence 764 4589999999995 79999998888999999999763
|
|
| >TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-12 Score=159.84 Aligned_cols=170 Identities=21% Similarity=0.341 Sum_probs=117.3
Q ss_pred hhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCc
Q psy10158 134 QYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGG 213 (1266)
Q Consensus 134 Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgG 213 (1266)
-.+..||..+-++|+++|||+|....+..... . ...+-.+.| .|+|+||++|. +|.|
T Consensus 470 ~~i~~DK~~TK~iL~~aGIPVP~g~~~~~~~~------a--~~~~~~~~g----~PVVVKP~~g~-----------~G~G 526 (737)
T TIGR01435 470 PLIMENKVVTKKVLAEAGFRVPFGDEFSSQAL------A--LEAFSLFEN----KAIVVKPKSTN-----------YGLG 526 (737)
T ss_pred HHHhcCHHHHHHHHHHcCcCCCCEEEECCHHH------H--HHHHHHhcC----CCEEEeeCCCC-----------CcCC
Confidence 35778999999999999999999988854210 0 011112334 89999999998 6889
Q ss_pred hhhhhcccCCccccccCC-c-ccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCC--CCc--ee-----ecC-
Q psy10158 214 SQRLFRKIGSRSSVYSPE-S-RVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPAL--DGK--VE-----RDS- 281 (1266)
Q Consensus 214 v~~LfrKignkSS~y~p~-s-~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvv--DG~--VR-----RN~- 281 (1266)
+- +|+.+.+.. ++... . ..+.+..+|.||||+ |+|+||+|+|+++++|+.|..+-| ||+ ++ .|.
T Consensus 527 Vs-i~~~~~~~e-el~~Al~~A~~~~~~VLVEefI~--G~EyRv~VIg~kvvaa~~R~Pa~ViGDG~~TI~eLI~~kN~~ 602 (737)
T TIGR01435 527 IT-IFKNGFTLE-DFQEALNIAFSEDSSVIIEEFLP--GTEYRFFVLNDKVEAVLLRVPANVTGDGIHTVRELVAEKNTD 602 (737)
T ss_pred eE-EecCcCCHH-HHHHHHHHHHhcCCeEEEEeccc--CCEEEEEEECCeEEEEEEECCCCEEECCHHHHHHHHHHhccC
Confidence 84 555432211 22111 1 224567899999996 999999999999999999999877 554 21 121
Q ss_pred --CCCceeeE--------------------------------------------e----eCCHHHHHHHHHHHHHhCCcc
Q psy10158 282 --EGKEIRYP--------------------------------------------V----ILSNAEKLISRKVCLAFKQTV 311 (1266)
Q Consensus 282 --hgKEiRyp--------------------------------------------V----~LT~eEK~IA~kaakAFGq~V 311 (1266)
.|++-+.| + .+-++-+++|.+||+|+|+.|
T Consensus 603 p~Rg~~~~~pl~~I~~d~~~~~L~~qg~tldsVp~~Ge~V~Lr~~aNlstGG~~iDvTd~ihp~~~~lA~~aa~algl~i 682 (737)
T TIGR01435 603 PLRGTDHRKPLEKITGPEETLMLKEQGLTIDSIPKKEQIVYLRENSNVSTGGDSIDMTDEMDDSYKQIAIRIATAVGAAI 682 (737)
T ss_pred cccCCcccCCcccccchHHHHHHHHcCCCccccCCCCCEEEEcCCCcccCCCceEecccccCHHHHHHHHHHHHhcCCCE
Confidence 12221211 1 344667899999999999999
Q ss_pred ceeeEEeeC-CC--------eEEEeecC
Q psy10158 312 CGFDLLRAN-GK--------SFVCDVNG 330 (1266)
Q Consensus 312 CGfDLLRs~-gg--------syVcDVNG 330 (1266)
|||||+--+ .. --|||||-
T Consensus 683 ~GVDii~~di~~p~~~~~~~~~iiEvN~ 710 (737)
T TIGR01435 683 CGVDLIIPDETIPDTDKHAIWGVIEANF 710 (737)
T ss_pred EEEEEEecCCCCCccccccceEEEEEcC
Confidence 999999532 22 34789983
|
gamma-glutamyltripeptides of the form gamma-Glu-Cys-X(aa). The N-terminal region is similar to proteobacterial glutamate-cysteine ligase. The C-terminal region is homologous to cyanophycin synthetase of cyanobacteria and, more distantly, to D-alanine-D-alanine ligases. Members of this family are found in Listeria and Enterococcus, Gram-positive lineages in which glutathione is produced (see PUBMED:8606174), and in Pasteurella multocida, a Proteobacterium. In Clostridium acetobutylicum, adjacent genes include separate proteins rather than a fusion protein. |
| >PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.2e-13 Score=136.49 Aligned_cols=123 Identities=20% Similarity=0.299 Sum_probs=80.8
Q ss_pred EEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccC--cceEEeeccCC-CCceEEEEEECCceeEEe
Q psy10158 190 FVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKS--GSFIYEDFMPT-DGTDVKVYTVGPDYAHAE 266 (1266)
Q Consensus 190 fVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~--gSyIYEEFI~t-~GtDVKVYtVGp~~vhAe 266 (1266)
+|+||+.|- .|.|+-++-+.-.|.++.+. .+-.+ ..++.|+||+. ..=|.|+++++++++||.
T Consensus 34 ~VlKPl~g~-----------gG~gV~~i~~~~~n~~~i~e---~~~~~~~~~~mvQ~flp~i~~GDkRii~~nG~~~~av 99 (173)
T PF02955_consen 34 IVLKPLDGM-----------GGRGVFRISRDDPNLNSILE---TLTKNGERPVMVQPFLPEIKEGDKRIILFNGEPSHAV 99 (173)
T ss_dssp EEEEESS-------------TTTT-EEE-TT-TTHHHHHH---HHTTTTTS-EEEEE--GGGGG-EEEEEEETTEE-SEE
T ss_pred EEEEECCCC-----------CCcCEEEEcCCCCCHHHHHH---HHHhcCCccEEEEeccccccCCCEEEEEECCEEhHHe
Confidence 999999997 35565433332222222222 22233 45999999995 333999999999999999
Q ss_pred eccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh---CCccceeeEEeeCCCeEEEeecCce
Q psy10158 267 ARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF---KQTVCGFDLLRANGKSFVCDVNGFS 332 (1266)
Q Consensus 267 ~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF---Gq~VCGfDLLRs~ggsyVcDVNGwS 332 (1266)
.|... .|+||.|.+-|+...++.||++|++||.+++..+ |+-.+|+|+| +.|+.|||=.|
T Consensus 100 ~R~P~--~gd~R~N~~~Gg~~~~~~lt~~e~~i~~~i~~~L~~~Gl~f~GiDvi----g~~l~EiNvts 162 (173)
T PF02955_consen 100 RRIPA--KGDFRSNLAAGGSAEPAELTEREREICEQIGPKLREDGLLFVGIDVI----GDKLTEINVTS 162 (173)
T ss_dssp EEE----SS-S---GGGTSCEEEEE--HHHHHHHHHHHHHHHHTT--EEEEEEE----TTEEEEEE-SS
T ss_pred ecCCC--CCCceeeeccCCceeecCCCHHHHHHHHHHHHHHhhcCcEEEEEecc----ccceEEEeccC
Confidence 99985 9999999999999999999999999999999877 7889999999 46999999544
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This is the ATP-binding domain of the enzyme.; GO: 0004363 glutathione synthase activity, 0005524 ATP binding, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.6e-11 Score=136.63 Aligned_cols=194 Identities=12% Similarity=0.186 Sum_probs=128.6
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
+|+||+-...-+-+.++.+.++..-.+..++.+....++||...++++++.|||+|++..++.... + .+..
T Consensus 77 id~vIP~~e~~~~~a~~~~~l~~~~~v~~~~~~~~~~~~DK~~~~~~~~~~GipvP~t~~v~~~~~------l---~~~~ 147 (389)
T PRK06849 77 IDLLIPTCEEVFYLSHAKEELSAYCEVLHFDFELLLLLHNKWEFAEQARSLGLSVPKTYLITDPEA------I---RNFM 147 (389)
T ss_pred CCEEEECChHHHhHHhhhhhhcCCcEEEcCCHHHHHHhhCHHHHHHHHHHcCCCCCCEEEeCCHHH------H---HHHh
Confidence 588888776654445554444434456679999999999999999999999999999999864110 1 1111
Q ss_pred -EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEE
Q psy10158 180 -EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTV 258 (1266)
Q Consensus 180 -~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtV 258 (1266)
... ..|+|+||+.|. .|.|+.+ +.+. .+........+..+|+||||+-....+-+++.
T Consensus 148 ~~~~----~~P~vlKP~~~~-----------~~~~v~~----~~~~--~~l~~~~~~~~~~~ivQe~I~G~e~~~~~~~~ 206 (389)
T PRK06849 148 FKTP----HTPYVLKPIYSR-----------FVRRVDL----LPKE--AALKELPISKDNPWVMQEFIQGKEYCSYSIVR 206 (389)
T ss_pred hcCC----CCcEEEEeCccc-----------CCCeEEE----ecCH--HHhcccccCCCCCeEEEEEecCCeEEEEEEEE
Confidence 112 389999999986 2445532 2221 11111122334579999999955556777888
Q ss_pred CCceeEEeeccCCCCCCceeecCCCC-ceeeEeeCCHHHHHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeecC
Q psy10158 259 GPDYAHAEARKSPALDGKVERDSEGK-EIRYPVILSNAEKLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 259 Gp~~vhAe~RKSPvvDG~VRRN~hgK-EiRypV~LT~eEK~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVNG 330 (1266)
++++++...... ..+. .++ .+.+.....++=.++|.++++++|.+ +++||++.. +|+.||+|||.
T Consensus 207 ~G~v~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~G~~~~df~~~~~g~~~~iEiNp 274 (389)
T PRK06849 207 SGELRAHSCYKP-----EYCA--GSGAQIAFQPINHPRIEEFVTHFVKELNYTGQISFDFIETENGDAYPIECNP 274 (389)
T ss_pred CCEEEEEEEeec-----cccC--CCCceeEeEECCcHHHHHHHHHHHHhcCceeEEEEEEEECCCCCEEEEEecC
Confidence 888665443221 1111 111 12222234566678999999999987 999999998 78899999993
|
|
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-11 Score=130.39 Aligned_cols=194 Identities=14% Similarity=0.185 Sum_probs=127.0
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.|++|+.+....++ .+..+.++..+ +++.|+.....+++||....++|+++|||+|++..+.... +..+
T Consensus 70 id~ii~~~d~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~---------~~~~ 140 (326)
T PRK12767 70 IDLLIPLIDPELPLLAQNRDRFEEIGVKVLVSSKEVIEICNDKWLTYEFLKENGIPTPKSYLPESLE---------DFKA 140 (326)
T ss_pred CCEEEECCcHHHHHHHHHHHHHHHcCcEEEeCCHHHHHHHhcHHHHHHHHHHcCCCCCCEEcccCHH---------HHHh
Confidence 57777764333333 33333344444 4678999999999999999999999999999998875311 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEE
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYT 257 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYt 257 (1266)
.+.. ..+..|+|+||.+|. .|.|+. +++ |.. ++ ...+.....+|.||||.-..-.|-+|+
T Consensus 141 ~~~~--~~~~~P~viKP~~g~-----------~s~gv~-~v~---~~~-el--~~~~~~~~~~lvqeyi~G~e~~v~~~~ 200 (326)
T PRK12767 141 ALAK--GELQFPLFVKPRDGS-----------ASIGVF-KVN---DKE-EL--EFLLEYVPNLIIQEFIEGQEYTVDVLC 200 (326)
T ss_pred hhhc--ccCCCCEEEEeCCCC-----------CccCeE-EeC---CHH-HH--HHHHHhCCCeEEEeccCCceEEEEEEE
Confidence 0111 124589999999986 355653 332 111 11 112233348999999943345666676
Q ss_pred E-CCceeEEeeccCCCCCCceeecCCCCce-eeEeeCCHHHHHHHHHHHHHhCC-ccceeeEEeeCCCeEEEeecC
Q psy10158 258 V-GPDYAHAEARKSPALDGKVERDSEGKEI-RYPVILSNAEKLISRKVCLAFKQ-TVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 258 V-Gp~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV~LT~eEK~IA~kaakAFGq-~VCGfDLLRs~ggsyVcDVNG 330 (1266)
. ++++++...++.- ...+|.. ...+...++=+++|.++++++|. .+++||++...|++||+|||.
T Consensus 201 ~~~G~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~i~~~~~~i~~~lg~~G~~~vd~~~~~g~~~viEiNp 268 (326)
T PRK12767 201 DLNGEVISIVPRKRI--------EVRAGETSKGVTVKDPELFKLAERLAEALGARGPLNIQCFVTDGEPYLFEINP 268 (326)
T ss_pred cCCCCEEEEEEeeee--------eecCCceeEEEEcCCHHHHHHHHHHHHhcCCeeeEEEEEEEECCeEEEEEEeC
Confidence 6 6677776665531 0112222 22234457778999999999999 499999999999999999997
|
|
| >PRK14569 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.9e-10 Score=124.73 Aligned_cols=228 Identities=13% Similarity=0.104 Sum_probs=145.0
Q ss_pred hhHHHHHHHHhhcCcEEEEEec-c-cccccccccccccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHH
Q psy10158 65 KPMKEILTRLEEFEFIKMIVFS-E-ETIQKPVDEWPIVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDR 140 (1266)
Q Consensus 65 kPMr~IL~RL~~~g~f~viiF~-d-kvILe~vE~WP~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDR 140 (1266)
+-.++|++-|.+.| ++++++. + +.++..+..- ..|+++..+.-.+.. ..+.+.+++.+ ||+-++..+..+.+||
T Consensus 22 ~s~~~v~~aL~~~g-~~~~~~~~~~~~~~~~l~~~-~~d~vf~~lhG~~ge~~~i~~~le~~gip~~Gs~~~a~~l~~DK 99 (296)
T PRK14569 22 KSGKAVLDSLISQG-YDAVGVDASGKELVAKLLEL-KPDKCFVALHGEDGENGRVSALLEMLEIKHTSSSMKSSVITMDK 99 (296)
T ss_pred HHHHHHHHHHHHcC-CEEEEEcCCchhHHHHhhcc-CCCEEEEeCCCCCCCChHHHHHHHHcCCCeeCCCHHHHHHHHCH
Confidence 55678888887755 4666664 2 2333222211 356555444322333 56667777776 5667889999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcc
Q psy10158 141 RKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRK 220 (1266)
Q Consensus 141 r~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrK 220 (1266)
..+.++|+++|||+|++.++.... ..+ ..+..|+|+||.+|. .|.|+. +
T Consensus 100 ~~~k~~l~~~gIptp~~~~~~~~~------------~~~----~~~~~P~vVKP~~gg-----------ss~Gv~----~ 148 (296)
T PRK14569 100 MISKEILMHHRMPTPMAKFLTDKL------------VAE----DEISFPVAVKPSSGG-----------SSIATF----K 148 (296)
T ss_pred HHHHHHHHHCCCCCCCeEEEchhh------------hhH----hhcCCCEEEEeCCCC-----------CCcCeE----E
Confidence 999999999999999998875310 001 234589999999875 345542 2
Q ss_pred cCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceee-cCCCCceee--EeeCCH---
Q psy10158 221 IGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER-DSEGKEIRY--PVILSN--- 294 (1266)
Q Consensus 221 ignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRR-N~hgKEiRy--pV~LT~--- 294 (1266)
+.|....-..-........+|+||||+ |.++.|.++|+....+.....+ +..+.. +.+.++..+ |..+.+
T Consensus 149 v~~~~eL~~a~~~~~~~~~~lvEefI~--G~E~tv~vl~~~~~~~~~i~~~--~~~~~~~~k~~~~~~~~~P~~l~~~~~ 224 (296)
T PRK14569 149 VKSIQELKHAYEEASKYGEVMIEQWVT--GKEITVAIVNDEVYSSVWIEPQ--NEFYDYESKYSGKSIYHSPSGLCEQKE 224 (296)
T ss_pred cCCHHHHHHHHHHHHhcCCEEEEcccc--cEEEEEEEECCcCcceEEEecC--CCcCChhhccCCCcEEEeCCCCCHHHH
Confidence 222221111000112234789999995 8999999999875544444332 222211 222333433 444543
Q ss_pred -HHHHHHHHHHHHhCC-ccceeeEEee-CCCeEEEeec
Q psy10158 295 -AEKLISRKVCLAFKQ-TVCGFDLLRA-NGKSFVCDVN 329 (1266)
Q Consensus 295 -eEK~IA~kaakAFGq-~VCGfDLLRs-~ggsyVcDVN 329 (1266)
+=+++|.++++++|. .+|+||++-. +|.+||+|||
T Consensus 225 ~~i~~~a~~~~~~Lg~~G~~rvD~~~~~~g~~~vlEIN 262 (296)
T PRK14569 225 LEVRQLAKKAYDLLGCSGHARVDFIYDDRGNFYIMEIN 262 (296)
T ss_pred HHHHHHHHHHHHHhCCceEEEEEEEEcCCCCEEEEEee
Confidence 445689999999995 6999999876 5789999999
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.9e-10 Score=125.85 Aligned_cols=206 Identities=19% Similarity=0.261 Sum_probs=129.2
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHH-HhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALL-EKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL-~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
+|++++-+.. .+.. +++.++..+.++.++.....+.+||+...++| +++|||+|++..+.... +....
T Consensus 63 id~v~~~~e~-v~~~-~~~~l~~~g~~~~~~~~~~~~~~dK~~~~~~~~~~~gip~p~~~~~~~~~---------~~~~~ 131 (380)
T TIGR01142 63 PDYIVPEIEA-IATD-ALFELEKEGYFVVPNARATKLTMNREGIRRLAAEELGLPTSRYMFADSLD---------ELREA 131 (380)
T ss_pred CCEEEeccCc-cCHH-HHHHHHhcCCeeCCCHHHHHHhhCHHHHHHHHHHHCCCCCCCceEeCCHH---------HHHHH
Confidence 5555554332 3333 34566666666778888999999999999985 89999999998886411 01111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc-----ccCcceEEeeccCCCCce
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV-----RKSGSFIYEDFMPTDGTD 252 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v-----r~~gSyIYEEFI~t~GtD 252 (1266)
+ ..+..|+|+||++|. .|.|+. +.+.. . ++..- ... ..++.+|.||||+ .+..
T Consensus 132 ~----~~~g~P~VvKP~~g~-----------~s~gv~-~v~~~---~-el~~~~~~~~~~~~~~~~~~ivEe~i~-~~~E 190 (380)
T TIGR01142 132 V----EKIGYPCVVKPVMSS-----------SGKGQS-VVRGP---E-DIEKAWEYAQEGARGGAGRVIVEEFID-FDYE 190 (380)
T ss_pred H----HHcCCCEEEEECCCc-----------CCCCeE-EECCH---H-HHHHHHHHHHhhccCCCCCEEEEEecC-CCEE
Confidence 1 123489999999987 366664 33321 1 11100 011 1246799999996 3478
Q ss_pred EEEEEE---CCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHH----HHHHHHHHHHhCC-ccceeeEEeeCCCeE
Q psy10158 253 VKVYTV---GPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAE----KLISRKVCLAFKQ-TVCGFDLLRANGKSF 324 (1266)
Q Consensus 253 VKVYtV---Gp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eE----K~IA~kaakAFGq-~VCGfDLLRs~ggsy 324 (1266)
+-|.++ +++++.. .| .+.+..+..-.+...|..|+++. +++|.++++++|. .++++|++-.++++|
T Consensus 191 ~sv~~~~~~~g~~~~~----~~--~~~~~~~~~~~~~~~p~~l~~~~~~~i~~~a~~~~~~l~~~G~~~ie~~~~~~~~~ 264 (380)
T TIGR01142 191 ITLLTVRHVDGNTTFC----AP--IGHRQIDGDYHESWQPQEMSEKALEEAQRIAKRITDALGGYGLFGVELFVKGDEVI 264 (380)
T ss_pred EEEEEEEcCCCCEEEe----cC--cceEEeCCeeEEEECCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCcEE
Confidence 888776 3332222 11 12222221112334567788764 4678899999997 778999999989999
Q ss_pred EEeecC-------ceecccCchhhHH
Q psy10158 325 VCDVNG-------FSFVKNSNKYYDD 343 (1266)
Q Consensus 325 VcDVNG-------wSFVK~n~kYYDd 343 (1266)
|+|||. |..+..+..+|+.
T Consensus 265 viEinpR~~~~~~~~~~~~g~~~~~~ 290 (380)
T TIGR01142 265 FSEVSPRPHDTGMVTLISQGLSEFAL 290 (380)
T ss_pred EEEeecCCCCCceEEeeecCCCHHHH
Confidence 999992 4455555666654
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.2e-10 Score=124.60 Aligned_cols=205 Identities=18% Similarity=0.213 Sum_probs=130.3
Q ss_pred ccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++++-..-.+..+ ...+++++.+ ||+=++..+.++.+||..+.++|+++|||+|++..+......+ ..+ .
T Consensus 81 ~~D~vf~~lhG~~gedg~iq~lle~~gipy~G~~~~a~~l~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~--~~~---~ 155 (333)
T PRK01966 81 EVDVVFPVLHGPPGEDGTIQGLLELLGIPYVGCGVLASALSMDKILTKRLLAAAGIPVAPYVVLTRGDWEE--ASL---A 155 (333)
T ss_pred cCCEEEEccCCCCCCCcHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEEEeccccch--hhH---H
Confidence 5899988754334443 5666777776 5555788999999999999999999999999999886431100 000 0
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
... ..+..|+|+||.+|. .+.|+. +.+ +....... +...+.+..+|+|+||+ |.++.|
T Consensus 156 ~~~----~~~~~P~vVKP~~~g-----------sS~Gv~-~v~---~~~el~~a~~~~~~~~~~vlvEefI~--G~E~~v 214 (333)
T PRK01966 156 EIE----AKLGLPVFVKPANLG-----------SSVGIS-KVK---NEEELAAALDLAFEYDRKVLVEQGIK--GREIEC 214 (333)
T ss_pred HHH----HhcCCCEEEEeCCCC-----------CccCEE-EEC---CHHHHHHHHHHHHhcCCcEEEEcCcC--CEEEEE
Confidence 001 124589999999985 355653 222 11111110 01123467899999998 899999
Q ss_pred EEECCc-eeEEeeccCCCCCCce--eecC-CC-CceeeEeeCCHHH----HHHHHHHHHHhCC-ccceeeEEee-CCCeE
Q psy10158 256 YTVGPD-YAHAEARKSPALDGKV--ERDS-EG-KEIRYPVILSNAE----KLISRKVCLAFKQ-TVCGFDLLRA-NGKSF 324 (1266)
Q Consensus 256 YtVGp~-~vhAe~RKSPvvDG~V--RRN~-hg-KEiRypV~LT~eE----K~IA~kaakAFGq-~VCGfDLLRs-~ggsy 324 (1266)
-++|.+ .+......-+. ++.+ ...- .| .+...|..|+++. +++|.++++++|. .+|.+|++-. +|++|
T Consensus 215 ~vl~~~~~~~~~~ei~~~-~~~~d~~~ky~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~~g~~~ 293 (333)
T PRK01966 215 AVLGNDPKASVPGEIVKP-DDFYDYEAKYLDGSAELIIPADLSEELTEKIRELAIKAFKALGCSGLARVDFFLTEDGEIY 293 (333)
T ss_pred EEECCCCeEcccEEEecC-CceEcHHHccCCCCceEEeCCCCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEcCCCCEE
Confidence 999952 11111111100 1111 1111 12 2334566777654 6889999999997 7899999986 56799
Q ss_pred EEeecC
Q psy10158 325 VCDVNG 330 (1266)
Q Consensus 325 VcDVNG 330 (1266)
|+|||-
T Consensus 294 vlEiNt 299 (333)
T PRK01966 294 LNEINT 299 (333)
T ss_pred EEEeeC
Confidence 999993
|
|
| >PRK14572 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.5e-09 Score=121.63 Aligned_cols=188 Identities=12% Similarity=0.144 Sum_probs=120.2
Q ss_pred HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEe
Q psy10158 115 KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEK 193 (1266)
Q Consensus 115 KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeK 193 (1266)
...+++++.+ ||+-++..+..+.+||..+.++|+++|||+|++..+.+.... ...++.+..- ..+..|+|+|
T Consensus 105 ~iq~~le~~gipy~Gs~~~a~~i~~DK~~~k~~l~~~GI~~p~~~~~~~~~~~------~~~~~~~~~~-~~l~~PvvVK 177 (347)
T PRK14572 105 RIQGFLDTLGIPYTGSGVLASALAMDKTRANQIFLQSGQKVAPFFELEKLKYL------NSPRKTLLKL-ESLGFPQFLK 177 (347)
T ss_pred HHHHHHHHcCcCcCCCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEEEEccccc------cChHHHHHHH-HhcCCCEEEe
Confidence 5666777776 555678899999999999999999999999999988653210 0000111100 1245899999
Q ss_pred cccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEEEEECC----ce---eE-
Q psy10158 194 PVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKVYTVGP----DY---AH- 264 (1266)
Q Consensus 194 pv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp----~~---vh- 264 (1266)
|++|. .+.|+. + +.|....... +.....+..+|.||||+ |+++.|-++|. +. +.
T Consensus 178 P~~gg-----------sS~GV~-~---v~~~~el~~a~~~~~~~~~~vlVEefI~--G~E~sv~vi~~~~~g~~~~~~l~ 240 (347)
T PRK14572 178 PVEGG-----------SSVSTY-K---ITNAEQLMTLLALIFESDSKVMSQSFLS--GTEVSCGVLERYRGGKRNPIALP 240 (347)
T ss_pred cCCCC-----------CCCCEE-E---ECCHHHHHHHHHHHHhcCCCEEEEcCcc--cEEEEEEEEeCccCCCCCceecc
Confidence 99985 234442 1 2221111000 00112456799999995 89999999973 21 11
Q ss_pred -EeeccCCCCCCc---eeecCCCCce--eeEeeCCHH----HHHHHHHHHHHhCCc-cceeeEEeeCCCeEEEeecC
Q psy10158 265 -AEARKSPALDGK---VERDSEGKEI--RYPVILSNA----EKLISRKVCLAFKQT-VCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 265 -Ae~RKSPvvDG~---VRRN~hgKEi--RypV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs~ggsyVcDVNG 330 (1266)
.|-+. .|. ++..-+.++. ..|..|+++ =+++|.++++++|.. ++++|++-.+|++||+|||.
T Consensus 241 ~~ei~~----~~~~~d~~~ky~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~~Lg~~G~~rvD~~~~~~~~~vlEiNt 313 (347)
T PRK14572 241 ATEIVP----GGEFFDFESKYKQGGSEEITPARISDQEMKRVQELAIRAHESLGCKGYSRTDFIIVDGEPHILETNT 313 (347)
T ss_pred cEEEec----CCCccCHHHccCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHhCCcceeEEEEEEECCcEEEEeeeC
Confidence 12221 121 2223333333 235567765 378999999999965 99999999889999999995
|
|
| >PRK14568 vanB D-alanine--D-lactate ligase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.4e-09 Score=119.74 Aligned_cols=198 Identities=15% Similarity=0.212 Sum_probs=133.4
Q ss_pred ccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++++-..-++-.+ ....++++.+ ||+-++..+.++.+||..+.++|+++|||+|++.++.....
T Consensus 90 ~~d~vf~~lhG~~gedg~iq~lle~~gipy~G~~~~asai~~DK~~~k~~l~~~GIp~p~~~~~~~~~~----------- 158 (343)
T PRK14568 90 RLDVVFPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLAYIVAKNAGIATPAFWTVTADER----------- 158 (343)
T ss_pred cCCEEEEcCCCCCCCchHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHcCcCcCCEEEEECCch-----------
Confidence 4788888755455553 7778888886 56668999999999999999999999999999998864211
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
+. -..+..|+|+||.+|- .+.|+. + +.|....-..- ...+.+..+|.||||+ |.++-|
T Consensus 159 --~~--~~~l~~P~iVKP~~~g-----------sS~Gv~-~---v~~~~eL~~a~~~a~~~~~~vlVEe~I~--G~E~sv 217 (343)
T PRK14568 159 --PD--AATLTYPVFVKPARSG-----------SSFGVS-K---VNSADELDYAIESARQYDSKVLIEEAVV--GSEVGC 217 (343)
T ss_pred --hh--hhhcCCCEEEEeCCCC-----------CCCCEE-E---eCCHHHHHHHHHHHHhcCCcEEEECCcC--CEEEEE
Confidence 00 1235689999999985 245553 2 22222111100 0123466799999996 888988
Q ss_pred EEECCc---eeEEeeccCCCCCCceeec----CC----CCceeeEeeCCHHH----HHHHHHHHHHhCC-ccceeeEEee
Q psy10158 256 YTVGPD---YAHAEARKSPALDGKVERD----SE----GKEIRYPVILSNAE----KLISRKVCLAFKQ-TVCGFDLLRA 319 (1266)
Q Consensus 256 YtVGp~---~vhAe~RKSPvvDG~VRRN----~h----gKEiRypV~LT~eE----K~IA~kaakAFGq-~VCGfDLLRs 319 (1266)
-++|.. ++....+..+ ..|.++.. .+ ..+...|..|+++. +++|.++++++|. .+|.||++-.
T Consensus 218 ~vl~~~~~~~~~~~~~i~~-~~~~~~~~~k~~~~~g~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~~Lg~~G~~rvDf~l~ 296 (343)
T PRK14568 218 AVLGNGADLVVGEVDQIRL-SHGFFRIHQENEPEKGSENSTIIVPADISAEERSRVQETAKAIYRALGCRGLARVDMFLQ 296 (343)
T ss_pred EEEcCCCCcceecceEEec-CCCccchhhhhccccCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEEEEEe
Confidence 888753 2222222322 13333311 11 11234667787653 5889999999999 7999999977
Q ss_pred -CCCeEEEeec
Q psy10158 320 -NGKSFVCDVN 329 (1266)
Q Consensus 320 -~ggsyVcDVN 329 (1266)
+|.+||+|||
T Consensus 297 ~~g~~~llEIN 307 (343)
T PRK14568 297 EDGTVVLNEVN 307 (343)
T ss_pred CCCCEEEEEee
Confidence 6779999999
|
|
| >PRK13790 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.8e-10 Score=124.76 Aligned_cols=193 Identities=17% Similarity=0.180 Sum_probs=123.1
Q ss_pred CCcH-HHHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEec
Q psy10158 110 GFPL-EKAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFN 187 (1266)
Q Consensus 110 GfPL-~KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~ 187 (1266)
..|| .....+++..+. +.-.+..+-.+.+||..+.++|+++|||+|++..+... .+..+++. .+.
T Consensus 36 E~~l~~~~~d~l~~~Gi~~~g~s~~a~~l~~dK~~~k~~l~~~gIptp~~~~~~~~---------~ea~~~~~----~~g 102 (379)
T PRK13790 36 EQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTADYKEVERK---------KDALTYIE----NCE 102 (379)
T ss_pred cHHHHHHHHHHHHhCCCcEECCCHHHHHHhCCHHHHHHHHHHCCCCCCCEEEECCH---------HHHHHHHH----hcC
Confidence 3355 456667777774 44466677788899999999999999999999877531 11122222 134
Q ss_pred CCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcc---cccCcceEEeeccCCCCceEEEEEECCceeE
Q psy10158 188 KPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESR---VRKSGSFIYEDFMPTDGTDVKVYTVGPDYAH 264 (1266)
Q Consensus 188 kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~---vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vh 264 (1266)
.|+|+||..|. .|.|+. +.+ |....-..-.. ...++.+|+||||.-..-.|-+++-|..++.
T Consensus 103 ~PvVvKp~~~~-----------~gkGV~-iv~---~~~el~~a~~~~~~~~~~~~vlvEe~i~G~E~sv~~~~~g~~~~~ 167 (379)
T PRK13790 103 LPVVVKKDGLA-----------AGKGVI-IAD---TIEAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVP 167 (379)
T ss_pred CCEEEEeCCCC-----------CCCCEE-EEC---CHHHHHHHHHHHHhcCCCCeEEEEEcccCceEEEEEEeeCCEEEe
Confidence 89999999876 466663 333 21111000001 1235679999999755578888887765432
Q ss_pred --EeeccCC-CCCCceeecCCCCceeeEe-eCCHHH-----HHHHHHHHHHh---CCccce---eeEEeeCCCeEEEeec
Q psy10158 265 --AEARKSP-ALDGKVERDSEGKEIRYPV-ILSNAE-----KLISRKVCLAF---KQTVCG---FDLLRANGKSFVCDVN 329 (1266)
Q Consensus 265 --Ae~RKSP-vvDG~VRRN~hgKEiRypV-~LT~eE-----K~IA~kaakAF---Gq~VCG---fDLLRs~ggsyVcDVN 329 (1266)
+..++.. ..||...-|+.|-+.-.|+ .|+++. ++||.++++++ |...+| +|++-+.+++||+|||
T Consensus 168 ~~~~~~~~kr~~~~d~g~~tgg~~~~~p~~~l~~~~~~~~~~~i~~~~~~aL~~~g~~~~Gvl~~e~~lt~~g~~viEiN 247 (379)
T PRK13790 168 FDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFN 247 (379)
T ss_pred cccccccccccccCCCCCcCCCCceEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCCeEEEEEE
Confidence 2222221 2366555565333333344 456653 67899999998 545556 5998888889999999
Q ss_pred C
Q psy10158 330 G 330 (1266)
Q Consensus 330 G 330 (1266)
.
T Consensus 248 ~ 248 (379)
T PRK13790 248 A 248 (379)
T ss_pred c
Confidence 6
|
|
| >PRK14570 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=8e-09 Score=117.49 Aligned_cols=206 Identities=11% Similarity=0.062 Sum_probs=129.5
Q ss_pred ccceeeccccCCCcHH-HHHHHHhhcCCccccCc-cchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPLE-KAIKYANLRKPFVINNL-NMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~-KAi~Y~klrkp~~lNdl-~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++++...-.+=.+ .+..++++.+.+.++.- .+.++.+||..+.++|+++|||+|.+..+.+...... ..+..
T Consensus 87 ~~D~vf~~lhG~~GEdg~iqglle~~giPy~Gs~~~asal~~DK~~tK~~l~~~GIpt~p~~~~~~~~~~~~---~~~~~ 163 (364)
T PRK14570 87 EIDVVFPIVHGRTGEDGAIQGFLKVMDIPCVGAGILGSAISINKYFCKLLLKSFNIPLVPFIGFRKYDYFLD---KEGIK 163 (364)
T ss_pred CCCEEEEcCCCCCCCcCHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHcCCCCCCEEEEeccccccc---hHHHH
Confidence 4788877664334343 78899999987666555 6999999999999999999999999877754210000 00000
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC--cccccCcceEEeeccCCCCceEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE--SRVRKSGSFIYEDFMPTDGTDVK 254 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~--s~vr~~gSyIYEEFI~t~GtDVK 254 (1266)
+.+ -..+..|+|+||..+- .|.|+. + +.|.. ++..- .....+..+|.||||. |.++.
T Consensus 164 ~~~---~~~lg~PviVKP~~~G-----------sS~Gv~-~---v~~~~-el~~al~~a~~~~~~vlVEefI~--GrEi~ 222 (364)
T PRK14570 164 KDI---KEVLGYPVIVKPAVLG-----------SSIGIN-V---AYNEN-QIEKCIEEAFKYDLTVVIEKFIE--AREIE 222 (364)
T ss_pred HHH---HHhcCCCEEEEeCCCC-----------CCCcEE-E---eCCHH-HHHHHHHHHHhCCCCEEEECCcC--CEEEE
Confidence 111 0124589999999864 245553 2 22211 11110 1123356799999997 89999
Q ss_pred EEEECCceeEE---eeccCCCCCCcee---e--cCC-CCcee--eEeeCCH----HHHHHHHHHHHHhCC-ccceeeEEe
Q psy10158 255 VYTVGPDYAHA---EARKSPALDGKVE---R--DSE-GKEIR--YPVILSN----AEKLISRKVCLAFKQ-TVCGFDLLR 318 (1266)
Q Consensus 255 VYtVGp~~vhA---e~RKSPvvDG~VR---R--N~h-gKEiR--ypV~LT~----eEK~IA~kaakAFGq-~VCGfDLLR 318 (1266)
|-++|+....+ .+..- .++.|- . ..+ |+-.. -|..|++ +=+++|+++++++|. .+|.||++-
T Consensus 223 v~Vlg~~~~~v~~~~Ei~~--~~~~f~dy~~Ky~~~~~~~~~~~~Pa~l~~e~~~~i~~~A~~~~~aLg~~G~~RvDf~l 300 (364)
T PRK14570 223 CSVIGNEQIKIFTPGEIVV--QDFIFYDYDAKYSTIPGNSIVFNIPAHLDTKHLLDIKEYAFLTYKNLELRGMARIDFLI 300 (364)
T ss_pred EEEECCCCceEeeeEEEEe--CCCCccCHHHhcCCCCCCceEEECCCCCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEE
Confidence 99999753221 11110 011111 1 111 22222 2555664 567889999999999 689999987
Q ss_pred e--CCCeEEEeecC
Q psy10158 319 A--NGKSFVCDVNG 330 (1266)
Q Consensus 319 s--~ggsyVcDVNG 330 (1266)
. +|.+||+|||-
T Consensus 301 ~~~~g~~yvlEiNt 314 (364)
T PRK14570 301 EKDTGLIYLNEINT 314 (364)
T ss_pred ECCCCcEEEEEeeC
Confidence 6 37899999994
|
|
| >PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-09 Score=107.98 Aligned_cols=162 Identities=19% Similarity=0.282 Sum_probs=95.8
Q ss_pred hhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchh
Q psy10158 136 DIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQ 215 (1266)
Q Consensus 136 ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~ 215 (1266)
++.||...++++.+.|||+|++..+..... ..+.+.- +..|+|+||..|. .|.|+.
T Consensus 1 ~~~dK~~~~~~~~~~gv~~P~~~~~~~~~~---------~~~~~~~----~~~p~vvKp~~g~-----------gs~gv~ 56 (184)
T PF13535_consen 1 RCNDKYRMRELLKKAGVPVPKTRIVDSEEE---------LRAFAED----LGFPFVVKPVDGS-----------GSRGVF 56 (184)
T ss_dssp -TCCHHHHHHHHHHHTS----EEEECSHHH---------HHHHHHH----SSSSEEEEESS-S-----------TTTT-E
T ss_pred CCCCHHHHHHHHHHcCcCCCCEEEECCHHH---------HHHHHHH----cCCCEEEEcCccc-----------cCCCEE
Confidence 357999999999999999999999864211 1111111 1289999999996 355553
Q ss_pred hhhcccCCccccccCCccc-----ccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCC---Ccee
Q psy10158 216 RLFRKIGSRSSVYSPESRV-----RKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG---KEIR 287 (1266)
Q Consensus 216 ~LfrKignkSS~y~p~s~v-----r~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hg---KEiR 287 (1266)
+++ +.+....--..+ ..++.||.||||+...-.+.+++.+++++.+...+.- .....+. ....
T Consensus 57 -~~~---~~~~l~~~~~~~~~~~~~~~~~~ivqe~i~g~e~~~~~~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~ 127 (184)
T PF13535_consen 57 -IVH---SPEELEAALAEIREDSPLGNGPVIVQEYIPGDEYSVDGVVDDGEVVFAGISRYV-----RQSPGHFSGGVPTG 127 (184)
T ss_dssp -EES---SHHHHHHHHHHHHHHHS-HSSSEEEEE---SEEEEEEEEEETTEEEEEEEEEEE-----EEETCCCSSSEEEE
T ss_pred -EeC---CHHHHHHHHHHHHHhcccCCccEEEEEeeeeeeEEEEEEEEcceEEEEEEEEEe-----cccccccccceeee
Confidence 333 222111110112 1257899999999545778888888887555544331 1112222 3344
Q ss_pred eEeeCC----HHHHHHHHHHHHHhCC--ccceeeEEeeCCC-eEEEeecC
Q psy10158 288 YPVILS----NAEKLISRKVCLAFKQ--TVCGFDLLRANGK-SFVCDVNG 330 (1266)
Q Consensus 288 ypV~LT----~eEK~IA~kaakAFGq--~VCGfDLLRs~gg-syVcDVNG 330 (1266)
+....+ ++=++.+.++++++|. .++++|++...+| .|++|||.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~id~~~~~~g~~~~iEiN~ 177 (184)
T PF13535_consen 128 YSVPSEPPLPEELRDLARKLLRALGYRNGFFHIDFIVDPDGELYFIEINP 177 (184)
T ss_dssp EEES--CEHHHHHHHHHHHHHHHHT--SEEEEEEEEEETCCEEEEEEEES
T ss_pred eecccccccHHHHHHHHHHHHHHcCCceEEEEEEEEEeCCCCEEEEEECc
Confidence 444332 5667889999999997 9999999999766 69999995
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.5e-09 Score=117.31 Aligned_cols=194 Identities=21% Similarity=0.276 Sum_probs=120.1
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHH-hcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLE-KEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~-~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
+|++|+.+.. .+.. ++++++..+..+..+..+..+.+||....+.|. ++|||+|++..++... +....
T Consensus 76 id~vi~~~e~-~~~~-~~~~l~~~g~~~~~~~~a~~~~~dK~~~k~~l~~~~gip~p~~~~~~s~~---------~l~~~ 144 (395)
T PRK09288 76 PDYIVPEIEA-IATD-ALVELEKEGFNVVPTARATRLTMNREGIRRLAAEELGLPTSPYRFADSLE---------ELRAA 144 (395)
T ss_pred CCEEEEeeCc-CCHH-HHHHHHhcCCeeCCCHHHHHHHhCHHHHHHHHHHhCCCCCCCceEECCHH---------HHHHH
Confidence 7888876554 3333 344444455555678888899999999999985 7899999999886411 11111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc----c-cCcceEEeeccCCCCceE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV----R-KSGSFIYEDFMPTDGTDV 253 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v----r-~~gSyIYEEFI~t~GtDV 253 (1266)
+. .+..|+|+||.+|. .|.|+. +.+ +....-..-... + ....+|.||||+ .|..+
T Consensus 145 ~~----~~g~P~VvKP~~g~-----------~s~Gv~-~v~---~~~el~~~~~~~~~~~~~~~~~~lvEefi~-~~~E~ 204 (395)
T PRK09288 145 VE----EIGYPCVVKPVMSS-----------SGKGQS-VVR---SPEDIEKAWEYAQEGGRGGAGRVIVEEFID-FDYEI 204 (395)
T ss_pred HH----hcCCCEEEEeCCCc-----------CCCCeE-EEC---CHHHHHHHHHHHHhhccccCCCEEEEEecC-CCEEE
Confidence 11 23489999999886 356664 333 222110000011 1 136799999997 35677
Q ss_pred EEEEECC---ceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHH----HHHHHHHHHhCC-ccceeeEEeeCCCeEE
Q psy10158 254 KVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK----LISRKVCLAFKQ-TVCGFDLLRANGKSFV 325 (1266)
Q Consensus 254 KVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK----~IA~kaakAFGq-~VCGfDLLRs~ggsyV 325 (1266)
-|.++.. ...... | . +.++.+-+-.+...|..|+++.. ++|.++++++|. .++.+|+.-.++++||
T Consensus 205 sv~~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~p~~l~~~~~~~i~~~~~~~~~~L~~~G~~~ve~~~~~~~~~v 278 (395)
T PRK09288 205 TLLTVRAVDGGTHFCA----P-I-GHRQEDGDYRESWQPQPMSPAALEEAQEIAKKVTDALGGRGLFGVELFVKGDEVYF 278 (395)
T ss_pred EEEEEEcCCCCEEEec----C-c-ccEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCeEEE
Confidence 7776632 222221 1 1 22222211123345777887654 488999999984 4567899988889999
Q ss_pred EeecC
Q psy10158 326 CDVNG 330 (1266)
Q Consensus 326 cDVNG 330 (1266)
+|+|.
T Consensus 279 iEinp 283 (395)
T PRK09288 279 SEVSP 283 (395)
T ss_pred EEecC
Confidence 99993
|
|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=114.31 Aligned_cols=193 Identities=18% Similarity=0.296 Sum_probs=117.1
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
||++ .+-....|. .++++++..+..+.++.....+.+||....++|+++|||+|++..+.... +....+
T Consensus 61 ~dvi-t~e~e~i~~-~~l~~l~~~g~~~~p~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------~~~~~~ 129 (352)
T TIGR01161 61 CDVI-TFEFEHVDV-EALEKLEARGVKLFPSPDALAIIQDRLTQKQFLQKLGLPVPPFLVIKDEE---------ELDAAL 129 (352)
T ss_pred CCEE-EeCcCcCCH-HHHHHHHhCCCeECCCHHHHHHhcCHHHHHHHHHHcCCCCCCccEeCCHH---------HHHHHH
Confidence 5543 322233343 34566666655677999999999999999999999999999999986411 111111
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEEEEEE
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTV 258 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtV 258 (1266)
. .+..|+|+||.+|. +.|.|+. +.+ +.. ++..- ..+ .+..+|.||||+ .|..+-|.++
T Consensus 130 ~----~~g~P~vvKp~~~g----------~~g~Gv~-~v~---~~~-el~~a~~~~-~~~~~lvEe~I~-~~~E~sv~~~ 188 (352)
T TIGR01161 130 Q----ELGFPVVLKARTGG----------YDGRGQY-RIR---NEA-DLPQAAKEL-GDRECIVEEFVP-FERELSVIVA 188 (352)
T ss_pred H----HcCCCEEEEeCCCC----------CCCCCEE-EEC---CHH-HHHHHHHhc-CCCcEEEEecCC-CCeEEEEEEE
Confidence 1 13489999999863 0255653 322 211 11100 011 244899999997 3567777665
Q ss_pred C---CceeEEeeccCCCCCCceeecCCCCceeeEeeCCHH----HHHHHHHHHHHhCCc-cceeeEEeeC-CCeEEEeec
Q psy10158 259 G---PDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNA----EKLISRKVCLAFKQT-VCGFDLLRAN-GKSFVCDVN 329 (1266)
Q Consensus 259 G---p~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs~-ggsyVcDVN 329 (1266)
. ++++. -|+..- +.++-.......|..++++ =+++|.+++++||.. +++||++... |.+||+|||
T Consensus 189 ~~~~G~~~~-----~~~~~~-~~~~g~~~~~~~p~~~~~~~~~~~~~~a~~i~~~l~~~G~~~ve~~~~~dg~~~v~Ein 262 (352)
T TIGR01161 189 RSADGETAF-----YPVVEN-IHQDGILRYVVAPAAVPDAIQARAEEIARRLMEELGYVGVLAVEMFVLPDGRLLINELA 262 (352)
T ss_pred EcCCCCEEE-----ECCccc-EEeCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCceeEEEEEEEEeCCCcEEEEEec
Confidence 2 23221 122221 1121101112234556543 367899999999984 8999999875 459999999
Q ss_pred C
Q psy10158 330 G 330 (1266)
Q Consensus 330 G 330 (1266)
-
T Consensus 263 p 263 (352)
T TIGR01161 263 P 263 (352)
T ss_pred C
Confidence 4
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >PRK07206 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.6e-09 Score=116.71 Aligned_cols=200 Identities=13% Similarity=0.159 Sum_probs=116.4
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
.|++|+..-.+.++. -...+...+...|+...-...+||.+..+.|+++|||+|++..+.... +..+.+
T Consensus 71 ~d~vi~~~e~~~~~~--a~l~~~l~l~~~~~~~~~~~~~dK~~~r~~l~~~gi~~p~~~~~~~~~---------e~~~~~ 139 (416)
T PRK07206 71 PEAIIAGAESGVELA--DRLAEILTPQYSNDPALSSARRNKAEMINALAEAGLPAARQINTADWE---------EAEAWL 139 (416)
T ss_pred CCEEEECCCccHHHH--HHHHHhcCCCcCCChhhHHHhhCHHHHHHHHHHcCCCcccEEecCCHH---------HHHHHH
Confidence 588888644334432 222333455557888888889999999999999999999999885311 111222
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-------Cccc-ccCcceEEeeccCCCCc
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-------ESRV-RKSGSFIYEDFMPTDGT 251 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-------~s~v-r~~gSyIYEEFI~t~Gt 251 (1266)
.-.| -+..|+|+||++|. .|.|+. +.+ |....... .... ..+..+|.||||+-.--
T Consensus 140 ~~~g-~~~~P~VvKP~~g~-----------gs~gv~-~v~---~~~el~~~~~~~~~~~~~~~~~~~~~lvEe~i~G~E~ 203 (416)
T PRK07206 140 RENG-LIDRPVVIKPLESA-----------GSDGVF-ICP---AKGDWKHAFNAILGKANKLGLVNETVLVQEYLIGTEY 203 (416)
T ss_pred HhcC-CCCCCEEEeCCCCC-----------CCCCEE-EeC---CHHHHHHHHHHHHhccccCCCCCCeEEEEEccccEEE
Confidence 1112 01249999999986 234442 222 21110000 0001 12468999999974335
Q ss_pred eEEEEEECCceeE-Eeec--cCCCCCCceeecCCCCceeeEe--eCCHHHHHHHHHHHHHhCC--ccceeeEEeeCCCeE
Q psy10158 252 DVKVYTVGPDYAH-AEAR--KSPALDGKVERDSEGKEIRYPV--ILSNAEKLISRKVCLAFKQ--TVCGFDLLRANGKSF 324 (1266)
Q Consensus 252 DVKVYtVGp~~vh-Ae~R--KSPvvDG~VRRN~hgKEiRypV--~LT~eEK~IA~kaakAFGq--~VCGfDLLRs~ggsy 324 (1266)
.|-+++.+++... +..+ +.+..+|.+.... .. ..|. ...++=+++|.++++++|. .++.+|+....++++
T Consensus 204 sv~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~p~~~~~~~~i~~~~~~~~~alg~~~G~~h~E~~~~~~g~~ 280 (416)
T PRK07206 204 VVNFVSLDGNHLVTEIVRYHKTSLNSGSTVYDY--DE-FLDYSEPEYQELVDYTKQALDALGIKNGPAHAEVMLTADGPR 280 (416)
T ss_pred EEEEEEECCEEEEEEeEEeeecccCCCCceecc--cc-cCCccHHHHHHHHHHHHHHHHHcCCccCCceEEEEEcCCCCE
Confidence 5666766666433 2232 2222233221110 00 0111 1112234568899999998 578899999999999
Q ss_pred EEeec
Q psy10158 325 VCDVN 329 (1266)
Q Consensus 325 VcDVN 329 (1266)
|+|||
T Consensus 281 liEin 285 (416)
T PRK07206 281 LIEIG 285 (416)
T ss_pred EEEEC
Confidence 99999
|
|
| >PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.8e-09 Score=118.36 Aligned_cols=258 Identities=22% Similarity=0.356 Sum_probs=147.7
Q ss_pred CCeEEEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccccccccccccceeeccccCCCcHHHHHHHHhhc-CCc
Q psy10158 48 GKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDCLISFHSKGFPLEKAIKYANLR-KPF 126 (1266)
Q Consensus 48 ~~~i~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvILe~vE~WP~cD~LIsFfS~GfPL~KAi~Y~klr-kp~ 126 (1266)
.+..+||.|--.||.++==-+..+ -+.+...+++|=-.-. .|+++=--.||+|==..+.--..+..+|.+.+ ...
T Consensus 5 ~~~~~VGy~l~~kK~~~~~~~~~~-~~~~~~gi~~v~id~~---~pl~~QgpfDvIlHKltd~~~~~~l~~y~~~hP~v~ 80 (307)
T PF05770_consen 5 RKRFRVGYALSPKKQKSFIQPSFI-DLARSRGIDFVPIDLS---KPLEEQGPFDVILHKLTDEDWVQQLEEYIKKHPEVV 80 (307)
T ss_dssp GTT-EEEEE--HHHHHHHCCCHHC-CCCCCCTTEEEEEECC---SSSGCC--SCEEEE--CHCHHHHHHHHHHHH-TTSE
T ss_pred ccceEEEEEECHHHHHHhhHHHHH-HHHHhcCCEEEEcCCC---CCcccCCCcEEEEEeCCCHHHHHHHHHHHHHCCCeE
Confidence 367899988888886543222222 2333345555433211 45554434899998777632236778888875 457
Q ss_pred cccCccchhhhhHHHHHHHHHHhc-------CCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccc--
Q psy10158 127 VINNLNMQYDIQDRRKVYALLEKE-------GIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSA-- 197 (1266)
Q Consensus 127 ~lNdl~~Q~ilrDRr~vlqiL~~~-------gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~G-- 197 (1266)
+|..+.++..|.||...|++|++. +|.+|+.+++..+.. . ..+.+.-.| +.-|+|.||+-+
T Consensus 81 viDp~~~i~~l~dR~~~~~~l~~l~~~~~~~~i~~P~~v~i~~~~~--~------~~~~l~~ag--L~fPlI~KPlvA~G 150 (307)
T PF05770_consen 81 VIDPPDAIRPLLDRQSMLQVLSELELSEGDGRIRVPKFVVINSDAE--S------LPELLKEAG--LKFPLICKPLVACG 150 (307)
T ss_dssp EET-HHHHHHHCCHHCCHHHHHHHHHHHTCTTEE-S-EEEESSSHC--C------HHHHHHCTT--S-SSEEEEESB-SS
T ss_pred EEcCHHHHHHHHCHHHHHHHHHHhhccccCCcccCCceEEEcCCHH--H------HHHHHHHCC--CcccEEeeehhhcC
Confidence 778889999999999999998874 789999999975311 0 111122233 789999999985
Q ss_pred --cCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccC-CCC-
Q psy10158 198 --EDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKS-PAL- 273 (1266)
Q Consensus 198 --edHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKS-Pvv- 273 (1266)
+-|...|=|.. .|-. ..+...+.||||.-+|.=-||||||+.+.. ..|+| |-+
T Consensus 151 sa~SH~Maivf~~---~gL~-------------------~L~~P~VlQeFVNHggvLfKVyVvGd~v~~-v~R~SLpn~~ 207 (307)
T PF05770_consen 151 SADSHKMAIVFNE---EGLK-------------------DLKPPCVLQEFVNHGGVLFKVYVVGDKVFV-VKRPSLPNVS 207 (307)
T ss_dssp TSCCCEEEEE-SG---GGGT-------------------T--SSEEEEE----TTEEEEEEEETTEEEE-EEEE------
T ss_pred CccceEEEEEECH---HHHh-------------------hcCCCEEEEEeecCCCEEEEEEEecCEEEE-EECCCCCCCC
Confidence 34666665532 1221 123456999999999999999999987555 56665 322
Q ss_pred CCce-------e----ecCCCCce-------eeEeeCCH--HHHHHHHHHHHHhCCccceeeEEeeC---CCeEEEeecC
Q psy10158 274 DGKV-------E----RDSEGKEI-------RYPVILSN--AEKLISRKVCLAFKQTVCGFDLLRAN---GKSFVCDVNG 330 (1266)
Q Consensus 274 DG~V-------R----RN~hgKEi-------RypV~LT~--eEK~IA~kaakAFGq~VCGfDLLRs~---ggsyVcDVNG 330 (1266)
.|+. . ++.+-... ...+.+.+ .=+++|..+-++||++..|||++|-+ |+-||+|||=
T Consensus 208 ~~~~~~~~~~f~~~~vs~~~~~~~~~~~d~~~~~~~~p~~~~v~~la~~LR~~lgL~LFgfDvI~~~~t~~~~~VIDINy 287 (307)
T PF05770_consen 208 SGKLDREEIFFDFHQVSKLESSSDLSDLDKDPSQVEMPPDELVEKLAKELRRALGLTLFGFDVIRENGTGGRYYVIDINY 287 (307)
T ss_dssp SSS-TCGGCCCEGGGTCSTTTSSGGGSBSS-TTTTTS--HHHHHHHHHHHHHHHT-SEEEEEEEEGCCT-SSEEEEEEEE
T ss_pred cccccccccceeccccCCccccCchhhcccCcccccCCCHHHHHHHHHHHHHHhCcceeeeEEEEEcCCCCcEEEEEecc
Confidence 1211 1 11111000 01122222 22679999999999999999999974 4599999998
Q ss_pred c-eecccCchhhHH
Q psy10158 331 F-SFVKNSNKYYDD 343 (1266)
Q Consensus 331 w-SFVK~n~kYYDd 343 (1266)
| || |+-..|+..
T Consensus 288 FPgY-~~vp~f~~~ 300 (307)
T PF05770_consen 288 FPGY-KKVPDFESV 300 (307)
T ss_dssp S--T-TTSCTHHHH
T ss_pred CCCc-cCCCChHHH
Confidence 8 54 445556554
|
Inositol-tetrakisphosphate 1-kinase can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. This enzyme phosphorylates Ins(3,4,5,6)P4 at position 1 to form Ins(1,3,4,5,6)P5. This reaction is thought to have regulatory importance, since Ins(3,4,5,6)P4 is an inhibitor of plasma membrane Ca(2+)-activated Cl(-) channels, while Ins(1,3,4,5,6)P5 is not. It also phosphorylates Ins(1,3,4)P3 on O-5 and O-6 to form Ins(1,3,4,6)P4, an essential molecule in the hexakisphosphate (InsP6) pathway [, , , , ].; GO: 0000287 magnesium ion binding, 0005524 ATP binding, 0047325 inositol tetrakisphosphate 1-kinase activity, 0052725 inositol-1,3,4-trisphosphate 6-kinase activity, 0052726 inositol-1,3,4-trisphosphate 5-kinase activity, 0032957 inositol trisphosphate metabolic process, 0005622 intracellular; PDB: 1Z2P_X 1Z2O_X 1Z2N_X 2Q7D_A 2QB5_B 2ODT_X. |
| >PRK00885 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=116.32 Aligned_cols=191 Identities=13% Similarity=0.139 Sum_probs=114.3
Q ss_pred HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEe
Q psy10158 115 KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEK 193 (1266)
Q Consensus 115 KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeK 193 (1266)
....+++..+ |+.-++...-.+.+||....++|+++|||+|++..+.... +..+++. .+..|+|+|
T Consensus 77 ~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------~~~~~~~----~~~~P~VvK 143 (420)
T PRK00885 77 GIVDAFRAAGLPIFGPTKAAAQLEGSKAFAKDFMARYGIPTAAYETFTDAE---------EALAYLD----EKGAPIVVK 143 (420)
T ss_pred HHHHHHHHCCCcEECcCHHHHHHHcCHHHHHHHHHHcCCCCCCeEEeCCHH---------HHHHHHH----HcCCCEEEE
Confidence 3344555555 4445677778889999999999999999999998875311 1112221 134899999
Q ss_pred cccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cccc-ccCcceEEeeccCCCCceEEEEEECCceeE-Eeec
Q psy10158 194 PVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ESRV-RKSGSFIYEDFMPTDGTDVKVYTVGPDYAH-AEAR 268 (1266)
Q Consensus 194 pv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s~v-r~~gSyIYEEFI~t~GtDVKVYtVGp~~vh-Ae~R 268 (1266)
|..|. .|.|+. +.+........+.. .... +.++.+|+||||+-.--.|-+++-|..+.. ...|
T Consensus 144 P~~~~-----------gs~Gv~-~v~~~~el~~~~~~~~~~~~~~~~~~~vlvEe~i~G~E~sv~~~~~g~~~~~~~~~~ 211 (420)
T PRK00885 144 ADGLA-----------AGKGVV-VAMTLEEAKAAVDDMLAGNKFGDAGARVVIEEFLDGEEASFFAFVDGENVLPLPTAQ 211 (420)
T ss_pred eCCCC-----------CCCcEE-EeCCHHHHHHHHHHHhhcccccCCCCeEEEEEccCCcEEEEEEEECCCceEeceeeE
Confidence 99886 355653 33321100000000 0000 134679999999732244444544444322 2222
Q ss_pred c-CCCCCCceeecCCCCceeeEee-CCHHHH-----HHHHHHHHHhC---C---ccceeeEEeeCCCeEEEeecC
Q psy10158 269 K-SPALDGKVERDSEGKEIRYPVI-LSNAEK-----LISRKVCLAFK---Q---TVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 269 K-SPvvDG~VRRN~hgKEiRypV~-LT~eEK-----~IA~kaakAFG---q---~VCGfDLLRs~ggsyVcDVNG 330 (1266)
. -...+|...-|+.|-+.-.|.. |+++.. +|+.++.++++ + .++.+|+..+.+++||+|+|.
T Consensus 212 ~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~i~~~~~~al~~~gl~~~G~~~ve~~~t~~g~~viEin~ 286 (420)
T PRK00885 212 DHKRAGDGDTGPNTGGMGAYSPAPVVTEEVVERVMEEIIKPTVKGMAAEGIPYTGVLYAGLMITKDGPKVIEFNA 286 (420)
T ss_pred eeeecccCCCCCCCCCCceeccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEeEEEEEEEEECCCcEEEEEec
Confidence 1 1124666656666655656664 776533 36667777654 3 567789999999999999994
|
|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.3e-08 Score=129.15 Aligned_cols=195 Identities=18% Similarity=0.225 Sum_probs=128.5
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
..|.+|+.++.-.++ .....++..+ |++-|+..+..+++||.+..++|+++|||+|++..+.... +..+
T Consensus 629 ~~dgVi~~~g~~~~~-~la~~le~~Gi~ilg~s~~ai~~~~DK~~~~~~L~~~GIp~P~~~~~~s~e---------e~~~ 698 (1066)
T PRK05294 629 KPKGVIVQFGGQTPL-KLAKALEAAGVPILGTSPDAIDLAEDRERFSKLLEKLGIPQPPNGTATSVE---------EALE 698 (1066)
T ss_pred CCCEEEEEeCchhHH-HHHHHHHHCCCceeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCeEEECCHH---------HHHH
Confidence 358899988876666 4445555556 4455888999999999999999999999999999885311 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---C-cccccCcceEEeeccCCC-Cce
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---E-SRVRKSGSFIYEDFMPTD-GTD 252 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~-s~vr~~gSyIYEEFI~t~-GtD 252 (1266)
.+. .+..|+|+||..|. .|.|+. ++. |.. ++.. . .....+..+|.||||+-. .-+
T Consensus 699 ~~~----~igyPvvVKP~~~~-----------Gg~Gv~-iv~---~~e-eL~~~~~~a~~~s~~~~vlIEefI~G~~E~s 758 (1066)
T PRK05294 699 VAE----EIGYPVLVRPSYVL-----------GGRAME-IVY---DEE-ELERYMREAVKVSPDHPVLIDKFLEGAIEVD 758 (1066)
T ss_pred HHH----hcCCCeEEEeCCCC-----------CCCcEE-EEC---CHH-HHHHHHHHHHhhCCCCcEEEEecCCCCEEEE
Confidence 221 23489999999886 345553 332 111 1110 0 011246779999999754 568
Q ss_pred EEEEEECCce-eEE-eeccCCCCCCceeecCCCCceee---EeeCCHHH----HHHHHHHHHHhCC-ccceeeEEeeCCC
Q psy10158 253 VKVYTVGPDY-AHA-EARKSPALDGKVERDSEGKEIRY---PVILSNAE----KLISRKVCLAFKQ-TVCGFDLLRANGK 322 (1266)
Q Consensus 253 VKVYtVGp~~-vhA-e~RKSPvvDG~VRRN~hgKEiRy---pV~LT~eE----K~IA~kaakAFGq-~VCGfDLLRs~gg 322 (1266)
|-|+.-|..+ +.+ +.+.. +...|.|+... +..|++++ +++|.++++++|. .+++||++..+++
T Consensus 759 V~~v~dg~~v~i~~i~e~i~-------~~gv~~Gds~~~~p~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vqf~~~~~~ 831 (1066)
T PRK05294 759 VDAICDGEDVLIGGIMEHIE-------EAGVHSGDSACSLPPQTLSEEIIEEIREYTKKLALELNVVGLMNVQFAVKDDE 831 (1066)
T ss_pred EEEEecCCeEEEeeeEEeee-------eccccCCCCcEEecCCCCCHHHHHHHHHHHHHHHHHcCCeeeEEEEEEEECCe
Confidence 8887766532 222 23222 12345555433 34677643 4578889999998 4566999999999
Q ss_pred eEEEeecC
Q psy10158 323 SFVCDVNG 330 (1266)
Q Consensus 323 syVcDVNG 330 (1266)
+||+|||.
T Consensus 832 ~yViEiNp 839 (1066)
T PRK05294 832 VYVIEVNP 839 (1066)
T ss_pred EEEEEEec
Confidence 99999994
|
|
| >PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-08 Score=103.27 Aligned_cols=146 Identities=22% Similarity=0.347 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhh
Q psy10158 138 QDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 217 (1266)
Q Consensus 138 rDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~L 217 (1266)
.||++.++.|+++|||+|.++....... ...|+|+||.+|. -|.|. +.
T Consensus 2 ~dK~~~~~~L~~~gi~~P~~~~~~~~~~--------------------~~~~~viKp~~G~-----------Gg~~i-~~ 49 (161)
T PF02655_consen 2 SDKLKTYKFLKELGIPVPTTLRDSEPEP--------------------IDGPWVIKPRDGA-----------GGEGI-RI 49 (161)
T ss_dssp TSHHHHHHHHTTT-S--------EESS----------------------SSSEEEEESS-------------------B-
T ss_pred CCHHHHHHHHHccCCCCCCccccccccc--------------------cCCcEEEEeCCCC-----------CCCCe-EE
Confidence 5899999999999999995554432111 1489999999997 24444 34
Q ss_pred hcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCc---eeEEeeccCCCC-CCceeecCCCCceeeEee--
Q psy10158 218 FRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPD---YAHAEARKSPAL-DGKVERDSEGKEIRYPVI-- 291 (1266)
Q Consensus 218 frKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~---~vhAe~RKSPvv-DG~VRRN~hgKEiRypV~-- 291 (1266)
++.-. +.. ..+ ....|+||||+ |+-.-+.++... .+-+..|+-=.. ++.|+ .+|++ .+..
T Consensus 50 ~~~~~----~~~--~~~--~~~~i~Qe~i~--G~~~Sv~~l~~~~~~~~l~~~rq~i~~~~~~~~---~~G~~-~~~~~~ 115 (161)
T PF02655_consen 50 VDSED----ELE--EFL--NKLRIVQEFIE--GEPYSVSFLASGGGARLLGVNRQLIGNDDGRFR---YCGGI-VPADTP 115 (161)
T ss_dssp -SS------TTE-----------EEEE-----SEEEEEEEEE-SSSEEEEEEEEEEEET----TE---EEEEE-ES----
T ss_pred ECCch----hhc--ccc--ccceEEeeeeC--CEEeEEEEEEeCCceEEEEechHhhccccceee---ecccc-cccCCc
Confidence 44211 000 011 11129999997 555555444322 333444443100 11122 12222 2333
Q ss_pred CCHHHHHHHHHHHHHh-CC-ccceeeEEeeCCCeEEEeec
Q psy10158 292 LSNAEKLISRKVCLAF-KQ-TVCGFDLLRANGKSFVCDVN 329 (1266)
Q Consensus 292 LT~eEK~IA~kaakAF-Gq-~VCGfDLLRs~ggsyVcDVN 329 (1266)
+.++=.++|.+++++| |+ -.+|||++...+++||+|||
T Consensus 116 ~~~~~~~~~~~i~~~l~gl~G~~giD~I~~~~~~~viEIN 155 (161)
T PF02655_consen 116 LKEEIIELARRIAEALPGLRGYVGIDFILDDGGPYVIEIN 155 (161)
T ss_dssp HHHHHHHHHHHHHTTSTT--EEEEEEEEESS-SEEEEEEE
T ss_pred hHHHHHHHHHHHHHHcCCCeeeEeEEEEEeCCcEEEEEEc
Confidence 3445567889999999 76 58999999999999999999
|
This fold is found in many different enzyme families, including various peptide synthetases, biotin carboxylase, synapsin, succinyl-CoA synthetase, pyruvate phosphate dikinase, and glutathione synthetase, amongst others []. These enzymes contribute predominantly to macromolecular synthesis, using ATP-hydrolysis to activate their substrates. The ATP-grasp fold shares functional and structural similarities with the PIPK (phosphatidylinositol phosphate kinase) and protein kinase superfamilies. The ATP-grasp domain consists of two subdomains with different alpha+beta folds, which grasp the ATP molecule between them. Each subdomain provides a variable loop that forms part of the active site, with regions from other domains also contributing to the active site, even though these other domains are not conserved between the various ATP-grasp enzymes []. This entry describes a type of ATP-grasp fold that is found in a set of proteins of unknown function.; GO: 0005524 ATP binding, 0046872 metal ion binding; PDB: 3DF7_A. |
| >PRK02186 argininosuccinate lyase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.7e-08 Score=124.24 Aligned_cols=204 Identities=17% Similarity=0.156 Sum_probs=130.3
Q ss_pred cccccccccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccc
Q psy10158 92 KPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHE 171 (1266)
Q Consensus 92 e~vE~WP~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~ 171 (1266)
+-+..+...|+++++.- +.+.-|...++..+.+ -|+..+-.+.+||.+..+.|+++|||+|++..++...
T Consensus 63 ~~~~~~~~i~~V~~~se--~~v~~aa~lae~lglp-g~~~ea~~~~~dK~~~r~~L~~~GIp~P~~~~v~~~~------- 132 (887)
T PRK02186 63 RFVSSLDGVAGIMSSSE--YFIEVASEVARRLGLP-AANTEAIRTCRDKKRLARTLRDHGIDVPRTHALALRA------- 132 (887)
T ss_pred HHHHhcCCCCEEEeCch--hhHHHHHHHHHHhCcC-CCCHHHHHHhcCHHHHHHHHHHcCCCCCCEEEeCCHH-------
Confidence 66677777899998733 3333333334433433 3678888899999999999999999999999886421
Q ss_pred ccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc--cCcceEEeeccCCC
Q psy10158 172 LVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR--KSGSFIYEDFMPTD 249 (1266)
Q Consensus 172 l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr--~~gSyIYEEFI~t~ 249 (1266)
+..+.+. .+..|+|+||++|. .|.|+. +.+ |.......-..+. ..+.||.||||+-.
T Consensus 133 --e~~~~~~----~~~~PvVVKP~~g~-----------gS~GV~-~v~---~~~el~~a~~~~~~~~~~~~lvEEfI~G~ 191 (887)
T PRK02186 133 --VALDALD----GLTYPVVVKPRMGS-----------GSVGVR-LCA---SVAEAAAHCAALRRAGTRAALVQAYVEGD 191 (887)
T ss_pred --HHHHHHH----hCCCCEEEEeCCCC-----------CCCCeE-EEC---CHHHHHHHHHHHHhcCCCcEEEeecccCC
Confidence 1112221 23489999999996 345553 322 2211100000111 36789999999854
Q ss_pred CceEEEEEECCc-eeEEeeccCCCCCCceeecCCCCceeeEeeCCHHH----HHHHHHHHHHhCC--ccceeeEEeeCCC
Q psy10158 250 GTDVKVYTVGPD-YAHAEARKSPALDGKVERDSEGKEIRYPVILSNAE----KLISRKVCLAFKQ--TVCGFDLLRANGK 322 (1266)
Q Consensus 250 GtDVKVYtVGp~-~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eE----K~IA~kaakAFGq--~VCGfDLLRs~gg 322 (1266)
--.|-+++.++. ++.+..++.......|.-. +.-+|..|++++ .+++.++++++|. .++++|+...+++
T Consensus 192 E~sVe~i~~~g~~~i~~i~~k~~~~~~~~ve~----g~~~P~~l~~~~~~~l~~~~~~~l~aLG~~~G~~hvE~~~t~~g 267 (887)
T PRK02186 192 EYSVETLTVARGHQVLGITRKHLGPPPHFVEI----GHDFPAPLSAPQRERIVRTVLRALDAVGYAFGPAHTELRVRGDT 267 (887)
T ss_pred cEEEEEEEECCcEEEEEEEeeecCCCCCeEEe----ccccCCCCCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEECCC
Confidence 466777776543 4555555542111112111 123567777644 4678999999998 5688999999999
Q ss_pred eEEEeecC
Q psy10158 323 SFVCDVNG 330 (1266)
Q Consensus 323 syVcDVNG 330 (1266)
+||||||.
T Consensus 268 ~~liEIn~ 275 (887)
T PRK02186 268 VVIIEINP 275 (887)
T ss_pred EEEEEECC
Confidence 99999995
|
|
| >PRK08463 acetyl-CoA carboxylase subunit A; Validated | Back alignment and domain information |
|---|
Probab=98.74 E-value=3e-08 Score=116.05 Aligned_cols=201 Identities=17% Similarity=0.203 Sum_probs=120.9
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCe-EEeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRY-AVLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~t-v~~~rd~~~~~~~~l~e 174 (1266)
.+|++++.| ||-. ....+.++..+ +|+-++.....+++||....++|+++|||+|.. ....... ..+
T Consensus 73 ~iDaI~pg~--g~lsE~~~~a~~~e~~Gi~~iGps~~~i~~~~DK~~~k~~l~~~gIpvpp~~~~~~~~~-------~~~ 143 (478)
T PRK08463 73 GADAIHPGY--GFLSENYEFAKAVEDAGIIFIGPKSEVIRKMGNKNIARYLMKKNGIPIVPGTEKLNSES-------MEE 143 (478)
T ss_pred CCCEEEECC--CccccCHHHHHHHHHCCCceecCCHHHHHhhCcHHHHHHHHHHcCCCCCCCccccCCCC-------HHH
Confidence 378888876 4422 22444555555 445588899999999999999999999999774 3332110 001
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---C-cccccCcceEEeeccCCCC
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---E-SRVRKSGSFIYEDFMPTDG 250 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~-s~vr~~gSyIYEEFI~t~G 250 (1266)
..+.+. .+..|+|+||.+|. -|.|++ +.+....-...+.- + ...-.++.++.|+||.. +
T Consensus 144 ~~~~~~----~igyPvvvKP~~gg-----------Gg~Gv~-iv~~~~eL~~a~~~~~~~a~~~~~~~~vlvEefI~~-~ 206 (478)
T PRK08463 144 IKIFAR----KIGYPVILKASGGG-----------GGRGIR-VVHKEEDLENAFESCKREALAYFNNDEVFMEKYVVN-P 206 (478)
T ss_pred HHHHHH----HhCCCEEEEeCCCC-----------CCCceE-EeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCC-C
Confidence 111121 23489999999986 245553 22211100000000 0 00113578999999974 5
Q ss_pred ceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCceeeEe-eCCHHHH----HHHHHHHHHhCCccce-eeEEee-C
Q psy10158 251 TDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRYPV-ILSNAEK----LISRKVCLAFKQTVCG-FDLLRA-N 320 (1266)
Q Consensus 251 tDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV-~LT~eEK----~IA~kaakAFGq~VCG-fDLLRs-~ 320 (1266)
..+-+-++|. +++|...|...+ .+++..--+.. |. .|+++.+ ++|.++++++|..-+| ||++.. +
T Consensus 207 ~~iev~v~~d~~g~v~~~~er~~s~----~~~~~~~ie~~-P~~~l~~~~~~~i~~~a~~~~~alg~~g~~~vEf~~~~~ 281 (478)
T PRK08463 207 RHIEFQILGDNYGNIIHLCERDCSI----QRRHQKVIEIA-PCPSISDNLRKTMGVTAVAAAKAVGYTNAGTIEFLLDDY 281 (478)
T ss_pred eEEEEEEEEcCCCCEEEEeccCCcc----ccccCceEEEC-CCCCCCHHHHHHHHHHHHHHHHHcCCCCceeEEEEEcCC
Confidence 6666655554 466666665421 12221111221 22 4777666 4889999999987666 999987 4
Q ss_pred CCeEEEeecC
Q psy10158 321 GKSFVCDVNG 330 (1266)
Q Consensus 321 ggsyVcDVNG 330 (1266)
|++||||||.
T Consensus 282 ~~~y~iEiN~ 291 (478)
T PRK08463 282 NRFYFMEMNT 291 (478)
T ss_pred CCEEEEEEEC
Confidence 8899999994
|
|
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.6e-08 Score=126.37 Aligned_cols=197 Identities=17% Similarity=0.231 Sum_probs=126.0
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.+|.+|+.++.-.++ .+...++..+ |+.-|+......++||.+..++|+++|||+|++..+... .+..+
T Consensus 629 ~idgVI~~~gg~~~~-~la~~le~~Gi~i~G~s~~~i~~~~DK~~f~~lL~~~GIp~P~~~~v~s~---------ee~~~ 698 (1050)
T TIGR01369 629 KPEGVIVQFGGQTPL-NLAKALEEAGVPILGTSPESIDRAEDREKFSELLDELGIPQPKWKTATSV---------EEAVE 698 (1050)
T ss_pred CCCEEEEccCcHhHH-HHHHHHHHCCCcEECCCHHHHHHHCCHHHHHHHHHHCCcCCCCeEEECCH---------HHHHH
Confidence 478999888654443 2223333344 445589999999999999999999999999999988641 11111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCcccccc--CCc-ccccCcceEEeeccCC-CCceE
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYS--PES-RVRKSGSFIYEDFMPT-DGTDV 253 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~--p~s-~vr~~gSyIYEEFI~t-~GtDV 253 (1266)
.+. .+..|+|+||..|. .|.|+. + +.|....-. .+. ....++.+|.||||+. ..-+|
T Consensus 699 ~~~----~igyPvIVKP~~~~-----------Gg~gv~-i---v~~~eeL~~~l~~a~~~s~~~~vlVeefI~~G~E~~V 759 (1050)
T TIGR01369 699 FAS----EIGYPVLVRPSYVL-----------GGRAME-I---VYNEEELRRYLEEAVEVSPEHPVLIDKYLEDAVEVDV 759 (1050)
T ss_pred HHH----hcCCCEEEEECCCC-----------CCCCeE-E---ECCHHHHHHHHHHHHHhCCCCCEEEeecCCCCeEEEE
Confidence 221 13489999999875 244443 2 211111000 000 1224667999999973 34678
Q ss_pred EEEEECCceeEEe-eccCCCCCCceeecCCCCceee--Ee-eCCHH----HHHHHHHHHHHhCC-ccceeeEEeeCCCeE
Q psy10158 254 KVYTVGPDYAHAE-ARKSPALDGKVERDSEGKEIRY--PV-ILSNA----EKLISRKVCLAFKQ-TVCGFDLLRANGKSF 324 (1266)
Q Consensus 254 KVYtVGp~~vhAe-~RKSPvvDG~VRRN~hgKEiRy--pV-~LT~e----EK~IA~kaakAFGq-~VCGfDLLRs~ggsy 324 (1266)
-++..|++++... ..+ ..+.+.|.|.... |. .|+++ =+++|.+++++||. .++.||++...|++|
T Consensus 760 d~l~d~g~v~i~~i~e~------~~~~gv~sGds~~~~P~~~l~~~~~~~i~~~a~ki~~aLgi~G~~~vqf~~~~~~~y 833 (1050)
T TIGR01369 760 DAVSDGEEVLIPGIMEH------IEEAGVHSGDSTCVLPPQTLSAEIVDRIKDIVRKIAKELNVKGLMNIQFAVKDGEVY 833 (1050)
T ss_pred EEEEeCCEEEEEEEEEe------ecccCCcCCCceEEecCCCCCHHHHHHHHHHHHHHHHHCCCcceEEEEEEEECCeEE
Confidence 8888887665432 111 1133456565443 32 57764 35678999999985 344589999999999
Q ss_pred EEeecC
Q psy10158 325 VCDVNG 330 (1266)
Q Consensus 325 VcDVNG 330 (1266)
|+|||.
T Consensus 834 vIEvNp 839 (1050)
T TIGR01369 834 VIEVNP 839 (1050)
T ss_pred EEEEeC
Confidence 999995
|
In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.2e-08 Score=109.19 Aligned_cols=191 Identities=21% Similarity=0.264 Sum_probs=117.4
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.||++. |-....| ..++++++.. ..+.++.....+.+||...-+.|+++|||+|++..+.... +..+.
T Consensus 63 ~~dvit-~e~e~i~-~~~l~~l~~~-~~~~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~v~s~~---------~l~~~ 130 (372)
T PRK06019 63 QCDVIT-YEFENVP-AEALDALAAR-VPVPPGPDALAIAQDRLTEKQFLDKLGIPVAPFAVVDSAE---------DLEAA 130 (372)
T ss_pred cCCEEE-eCcCCCC-HHHHHHHhcC-CeeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCceEeCCHH---------HHHHH
Confidence 566643 3233344 3556666555 5577999999999999999999999999999999886411 11111
Q ss_pred EEEcCeEecCCEEEecccc-cCcceEEEeccCCCCchhhhhcccCCccccccCCc-ccccCcceEEeeccCCCCceEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSA-EDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-RVRKSGSFIYEDFMPTDGTDVKVY 256 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~G-edHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s-~vr~~gSyIYEEFI~t~GtDVKVY 256 (1266)
+. .+..|+|+||..| .+ |.|+. ..+ +.. ++..-. .+ ....+|+||||+- |..+-|.
T Consensus 131 ~~----~~g~P~vlKp~~~g~~-----------g~Gv~-~v~---~~~-el~~a~~~~-~~~~~ivEe~I~~-~~E~sv~ 188 (372)
T PRK06019 131 LA----DLGLPAVLKTRRGGYD-----------GKGQW-VIR---SAE-DLEAAWALL-GSVPCILEEFVPF-EREVSVI 188 (372)
T ss_pred HH----HcCCcEEEEeCCCCcC-----------CCCeE-EEC---CHH-HHHHHHHhc-CCCCEEEEecCCC-CeEEEEE
Confidence 11 1348999999985 32 55654 222 211 111000 11 2468999999984 5667776
Q ss_pred EECCceeEEeeccCCCCCCceeecCCCCce----eeEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEeeC-CCeEEE
Q psy10158 257 TVGPDYAHAEARKSPALDGKVERDSEGKEI----RYPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRAN-GKSFVC 326 (1266)
Q Consensus 257 tVGp~~vhAe~RKSPvvDG~VRRN~hgKEi----RypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs~-ggsyVc 326 (1266)
+++.. .-+.+--|+. .|.|..++ ..|..+++ +=+++|.+++++||.. |++||+.... |.+||+
T Consensus 189 ~~~~~--~G~~~~~p~~-----e~~~~~gi~~~~~~pa~~~~~~~~~~~~~a~~i~~~L~~~G~~~vEff~~~dg~~~v~ 261 (372)
T PRK06019 189 VARGR--DGEVVFYPLV-----ENVHRNGILRTSIAPARISAELQAQAEEIASRIAEELDYVGVLAVEFFVTGDGELLVN 261 (372)
T ss_pred EEECC--CCCEEEeCCc-----ccEEeCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCccceeEEEEEEcCCCeEEEE
Confidence 65421 0011112221 12222222 23444554 4457889999999975 7889999985 459999
Q ss_pred eecC
Q psy10158 327 DVNG 330 (1266)
Q Consensus 327 DVNG 330 (1266)
|+|-
T Consensus 262 Einp 265 (372)
T PRK06019 262 EIAP 265 (372)
T ss_pred EecC
Confidence 9994
|
|
| >PRK05586 biotin carboxylase; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.5e-08 Score=113.11 Aligned_cols=196 Identities=15% Similarity=0.235 Sum_probs=118.7
Q ss_pred cccceeeccccCCCcHH-HHHH-HHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEE--eccCCCCCccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIK-YANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV--LDRESPDPVKHEL 172 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~-Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~--~~rd~~~~~~~~l 172 (1266)
..||+++|-| ||-.+ ..++ .++..+ ||+..+.....+++||.+..++|+++|||+|++.. +.. .
T Consensus 73 ~~~d~i~p~~--~~~~E~~~~a~~~~~~gi~~~g~s~~~~~~~~DK~~~k~~l~~~GIpvp~~~~~~~~~-~-------- 141 (447)
T PRK05586 73 TGAQAIHPGF--GFLSENSKFAKMCKECNIVFIGPDSETIELMGNKSNAREIMIKAGVPVVPGSEGEIEN-E-------- 141 (447)
T ss_pred cCCCEEEcCc--cccccCHHHHHHHHHCCCcEECcCHHHHHhhCCHHHHHHHHHHCCCCCCCCcccccCC-H--------
Confidence 4688888754 33321 2222 334344 56788999999999999999999999999998743 321 0
Q ss_pred cccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC--C--cc---cccCcceEEeec
Q psy10158 173 VESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP--E--SR---VRKSGSFIYEDF 245 (1266)
Q Consensus 173 ~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p--~--s~---vr~~gSyIYEEF 245 (1266)
.+....+. .+..|+|+||++|. .|.|++ +.+ +....-.. . .. .-.++.+|.|||
T Consensus 142 ~e~~~~~~----~igyPvvvKP~~gg-----------gg~Gv~-~v~---~~~el~~a~~~~~~~~~~~~~~~~vivEe~ 202 (447)
T PRK05586 142 EEALEIAK----EIGYPVMVKASAGG-----------GGRGIR-IVR---SEEELIKAFNTAKSEAKAAFGDDSMYIEKF 202 (447)
T ss_pred HHHHHHHH----HcCCCEEEEECCCC-----------CCCeeE-EEC---CHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 00111111 23589999999986 355664 222 22211000 0 00 001567999999
Q ss_pred cCCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCceee-E-eeCCHHH----HHHHHHHHHHhCCccce-ee
Q psy10158 246 MPTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRY-P-VILSNAE----KLISRKVCLAFKQTVCG-FD 315 (1266)
Q Consensus 246 I~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRy-p-V~LT~eE----K~IA~kaakAFGq~VCG-fD 315 (1266)
|.- ++.+-|.+++. ++++.-.|... ..+++ ++-+.. | ..|+++. +++|.++++++|..-++ ||
T Consensus 203 i~g-~~ei~v~v~~d~~G~~~~~~~~~~~----~~~~~--~~~~~~~p~~~l~~~~~~~l~~~a~~i~~aLg~~g~~~vE 275 (447)
T PRK05586 203 IEN-PKHIEFQILGDNYGNVVHLGERDCS----LQRRN--QKVLEEAPSPVMTEELRKKMGEIAVKAAKAVNYKNAGTIE 275 (447)
T ss_pred CCC-CeEEEEEEEECCCCCEEEEeceecc----eEecc--cceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEE
Confidence 963 36788877763 55555444321 12222 122221 2 2467643 46799999999976555 99
Q ss_pred EEee-CCCeEEEeecC
Q psy10158 316 LLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 316 LLRs-~ggsyVcDVNG 330 (1266)
++.. +|..||||||.
T Consensus 276 f~~~~~g~~~~iEvNp 291 (447)
T PRK05586 276 FLLDKDGNFYFMEMNT 291 (447)
T ss_pred EEEcCCCCEEEEEEEC
Confidence 9986 56689999994
|
|
| >PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp | Back alignment and domain information |
|---|
Probab=98.70 E-value=4e-08 Score=108.70 Aligned_cols=184 Identities=15% Similarity=0.188 Sum_probs=123.1
Q ss_pred cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCC-CCCc-cccccccCCeEEEcCeEecCCEEEecccccCcceEEEe
Q psy10158 129 NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRES-PDPV-KHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYY 206 (1266)
Q Consensus 129 Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~-~~~~-~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYy 206 (1266)
|+-..-.++.||....+++.+.|||+|+.++..... .... .....+...++.-. -..+||+||..|.
T Consensus 16 N~~~~~~l~~DK~~~~~l~~~~gi~vP~~i~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~viKP~~G~-------- 84 (285)
T PF14397_consen 16 NPREYYPLLDDKLLFKQLFRDYGIPVPEAIFNVGRDYFDLREQHSIEDLEEFLRKH---APDRFVIKPANGS-------- 84 (285)
T ss_pred CchhhccccCCHHHHHHHHHHhcCCCCceEEeccceEEecccccCHHHHHHHHHhc---cCCcEEEEeCCCC--------
Confidence 888888899999999999999999999955522110 0000 01111111222111 1278999999998
Q ss_pred ccCCCCchhhhhcccCCccccccCC-----cccccCc--ceEEeeccCC---------CC-ceEEEEEE----CCceeEE
Q psy10158 207 PTSAGGGSQRLFRKIGSRSSVYSPE-----SRVRKSG--SFIYEDFMPT---------DG-TDVKVYTV----GPDYAHA 265 (1266)
Q Consensus 207 p~s~GgGv~~LfrKignkSS~y~p~-----s~vr~~g--SyIYEEFI~t---------~G-tDVKVYtV----Gp~~vhA 265 (1266)
.|.|+. ++...+. ..+... ......+ .||+||||.- .+ -+|||.|+ ++.++.|
T Consensus 85 ---~G~Gi~-~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~liqe~i~qh~~~~~~~~~svnTiRvvT~~~~~~~~~~~a 158 (285)
T PF14397_consen 85 ---GGKGIL-VIDRRDG--SEINRDISALYAGLESLGGKDYLIQERIEQHPELAALSPSSVNTIRVVTFLDDGEVEVLMA 158 (285)
T ss_pred ---CccCEE-EEEeecC--cccccchhHHHHHHHhcCCccEEEEecccCCHHHHhhCCCCCCcEEEEEEEeCCeeEEEEE
Confidence 577774 3333221 111111 0111222 9999999973 23 79999999 3467899
Q ss_pred eeccCCCCCCceeecCCCCceeeEeeCC----------------------------------HHHHHHHHHHHHHh-CCc
Q psy10158 266 EARKSPALDGKVERDSEGKEIRYPVILS----------------------------------NAEKLISRKVCLAF-KQT 310 (1266)
Q Consensus 266 e~RKSPvvDG~VRRN~hgKEiRypV~LT----------------------------------~eEK~IA~kaakAF-Gq~ 310 (1266)
+.|-+ ..|...-|.|.|++...|.+. ++=.++|.++++.| ++.
T Consensus 159 ~lRlg--~~~~~~DN~~~Ggi~~~ID~~tGl~~~~~~~~~~~~~~~HPdTg~~~~g~~IP~w~~~~~l~~~~~~~~p~~~ 236 (285)
T PF14397_consen 159 MLRLG--RGGSGVDNFHQGGIGVGIDLATGLGRFAGYDQDGERYEHHPDTGAPFSGFQIPNWDEILELAKEAHRKFPGLG 236 (285)
T ss_pred EEEeC--CCCCcccccCCCCEEEEEecCCCccccccccCCCCEeeeCCCCCCccCCccCCCHHHHHHHHHHHHHHCCCCC
Confidence 99999 467777888888776655432 23356788888877 579
Q ss_pred cceeeEEeeCCCeEEEeecCc
Q psy10158 311 VCGFDLLRANGKSFVCDVNGF 331 (1266)
Q Consensus 311 VCGfDLLRs~ggsyVcDVNGw 331 (1266)
+.|+|+.=+..||+|+|.|.+
T Consensus 237 ~iGWDvait~~Gp~llE~N~~ 257 (285)
T PF14397_consen 237 YIGWDVAITEDGPVLLEGNAR 257 (285)
T ss_pred eEEEEEEEcCCCcEEEEeeCC
Confidence 999999999878999999976
|
|
| >PRK08462 biotin carboxylase; Validated | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.9e-08 Score=115.68 Aligned_cols=198 Identities=17% Similarity=0.248 Sum_probs=118.2
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEE--eccCCCCCcccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV--LDRESPDPVKHELV 173 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~--~~rd~~~~~~~~l~ 173 (1266)
.+|++|+-+ ||-- ....+.++..+ |++-++..+..+++||....++|+++|||+|.+.. +.. ..
T Consensus 76 ~~D~i~pg~--g~lse~~~~a~~~e~~Gi~~~g~~~~~~~~~~dK~~~r~~l~~~gIp~pp~~~~~~~~---------~~ 144 (445)
T PRK08462 76 EADAIFPGY--GFLSENQNFVEICSHHNIKFIGPSVEVMALMSDKSKAKEVMKRAGVPVIPGSDGALKS---------YE 144 (445)
T ss_pred CCCEEEECC--CccccCHHHHHHHHHCCCeEECcCHHHHHHhCCHHHHHHHHHHCCCCCCCCcccccCC---------HH
Confidence 378888876 3421 23334566666 46779999999999999999999999999988653 211 00
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---C-cccccCcceEEeeccCCC
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---E-SRVRKSGSFIYEDFMPTD 249 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~-s~vr~~gSyIYEEFI~t~ 249 (1266)
+..+.+ ..+..|+|+||.+|. .|.|++ +.+....-...|.- + .....++.+|.||||..
T Consensus 145 ~~~~~~----~~~g~PvvvKP~~g~-----------gs~Gv~-~v~~~~eL~~~~~~~~~~~~~~~~~~~vlvEe~i~g- 207 (445)
T PRK08462 145 EAKKIA----KEIGYPVILKAAAGG-----------GGRGMR-VVEDESDLENLYLAAESEALSAFGDGTMYMEKFINN- 207 (445)
T ss_pred HHHHHH----HHcCCCEEEEeCCCC-----------CCCCeE-EECCHHHHHHHHHHHHHHHHhccCCCcEEEeccCCC-
Confidence 111111 123489999999997 356664 33321100000100 0 00013567999999964
Q ss_pred CceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCce-eeEe-eCCH----HHHHHHHHHHHHhCCcc-ceeeEEee
Q psy10158 250 GTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEI-RYPV-ILSN----AEKLISRKVCLAFKQTV-CGFDLLRA 319 (1266)
Q Consensus 250 GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV-~LT~----eEK~IA~kaakAFGq~V-CGfDLLRs 319 (1266)
+..+.|.++|. ++++.-.|...+ .+++ .+-+ ..|. .|++ +=+++|.++++++|..= +-||++-.
T Consensus 208 ~~e~~v~v~~~~~g~~~~~g~~~~~~----~~~~--~~~~~~~p~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~ 281 (445)
T PRK08462 208 PRHIEVQILGDKHGNVIHVGERDCSL----QRRH--QKLIEESPAVVLDEKTRERLHETAIKAAKAIGYEGAGTFEFLLD 281 (445)
T ss_pred CeEEEEEEEECCCCCEEEEEeccccc----eecc--cceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCCCcceEEEEEe
Confidence 55577777753 444443332211 1111 1111 1122 4565 34568899999999853 33999887
Q ss_pred -CCCeEEEeecC
Q psy10158 320 -NGKSFVCDVNG 330 (1266)
Q Consensus 320 -~ggsyVcDVNG 330 (1266)
+|++||||||.
T Consensus 282 ~~g~~~viEiNp 293 (445)
T PRK08462 282 SNLDFYFMEMNT 293 (445)
T ss_pred CCCCEEEEEEEC
Confidence 46899999993
|
|
| >PRK07178 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.6e-08 Score=113.53 Aligned_cols=202 Identities=15% Similarity=0.155 Sum_probs=120.9
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
.||++++-| ||-- ..+.+.++..+ ||+-++.....+++||....++|+++|||+|.+....-.. ..+.
T Consensus 73 ~~D~I~pg~--g~lse~~~~a~~~e~~Gi~~igps~~~i~~~~DK~~~r~~l~~~GIp~pp~~~~~~~~-------~~e~ 143 (472)
T PRK07178 73 GCDALHPGY--GFLSENAELAEICAERGIKFIGPSAEVIRRMGDKTEARRAMIKAGVPVTPGSEGNLAD-------LDEA 143 (472)
T ss_pred CCCEEEeCC--CCcccCHHHHHHHHHcCCCccCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCcCCCC-------HHHH
Confidence 478888854 4422 23445555555 5667889999999999999999999999998765421000 0001
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cc-ccccCcceEEeeccCCCCc
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ES-RVRKSGSFIYEDFMPTDGT 251 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s-~vr~~gSyIYEEFI~t~Gt 251 (1266)
.+.. ..+..|+|+||.+|. .|.|++ +.+....-...|.- +. ....+..++.|+||. ++.
T Consensus 144 ~~~~----~~igyPvvvKp~~gg-----------Gg~Gv~-~v~~~~eL~~a~~~~~~~~~~~~~~~~v~iE~~i~-~~~ 206 (472)
T PRK07178 144 LAEA----ERIGYPVMLKATSGG-----------GGRGIR-RCNSREELEQNFPRVISEATKAFGSAEVFLEKCIV-NPK 206 (472)
T ss_pred HHHH----HHcCCcEEEEeCCCC-----------CCCCce-EeCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCC-CCe
Confidence 1111 123489999999987 356664 33321100000000 00 001245688999995 366
Q ss_pred eEEEEEEC---CceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHH----HHHHHHHHHhCCcc-ceeeEEee-CCC
Q psy10158 252 DVKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK----LISRKVCLAFKQTV-CGFDLLRA-NGK 322 (1266)
Q Consensus 252 DVKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK----~IA~kaakAFGq~V-CGfDLLRs-~gg 322 (1266)
.|-|-++| ++++|...|...+ -+++..-.|..-...|+++.+ ++|.++++++|..- +.||++.. +|+
T Consensus 207 eiev~v~~d~~G~~v~~~er~~s~----~~~~~~~~e~~P~~~l~~~~~~~i~~~a~~~~~aLg~~g~~~vEf~~d~~g~ 282 (472)
T PRK07178 207 HIEVQILADSHGNVVHLFERDCSI----QRRNQKLIEIAPSPQLTPEQRAYIGDLAVRAAKAVGYENAGTVEFLLDADGE 282 (472)
T ss_pred EEEEEEEEECCCCEEEEEccccce----EecCcceEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEeCCCC
Confidence 66665554 3566666554321 222222222221226777655 48999999999854 45999985 788
Q ss_pred eEEEeecC
Q psy10158 323 SFVCDVNG 330 (1266)
Q Consensus 323 syVcDVNG 330 (1266)
+||+|||.
T Consensus 283 ~y~iEiNp 290 (472)
T PRK07178 283 VYFMEMNT 290 (472)
T ss_pred EEEEEEeC
Confidence 99999994
|
|
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.9e-08 Score=111.59 Aligned_cols=198 Identities=13% Similarity=0.107 Sum_probs=115.1
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCcccccccc
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVES 175 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e~ 175 (1266)
.||++|+.++--.-.......++..+ ||+.++.....+++||....++|+++|||+|.+. .+.. . .+.
T Consensus 74 ~id~I~p~~~~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~DK~~~r~~l~~~gIp~pp~~~~~v~~-~--------~~~ 144 (451)
T PRK08591 74 GADAIHPGYGFLSENADFAEICEDSGFTFIGPSAETIRLMGDKVTAKATMKKAGVPVVPGSDGPVDD-E--------EEA 144 (451)
T ss_pred CCCEEEECCCccccCHHHHHHHHHCCCceECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCC-H--------HHH
Confidence 38899987631111123445556555 4677999999999999999999999999998864 3321 0 011
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc-------ccCcceEEeeccC
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV-------RKSGSFIYEDFMP 247 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v-------r~~gSyIYEEFI~ 247 (1266)
.+.+. .+..|+|+||++|. .|.|++ +.+. .. ++..- ... ..+..+|.||||+
T Consensus 145 ~~~~~----~~g~PvvvKP~~g~-----------gs~Gv~-iv~~---~~-el~~~~~~~~~~~~~~~~~~~vlvEe~i~ 204 (451)
T PRK08591 145 LAIAK----EIGYPVIIKATAGG-----------GGRGMR-VVRT---EA-ELEKAFSMARAEAKAAFGNPGVYMEKYLE 204 (451)
T ss_pred HHHHH----HcCCCEEEEECCCC-----------CCceEE-EECC---HH-HHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 11111 23489999999986 355653 3321 11 11100 000 0246799999996
Q ss_pred CCCceEEEEEEC---CceeEEeeccCCCCCCceeecCCCCceeeEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEee
Q psy10158 248 TDGTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEIRYPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRA 319 (1266)
Q Consensus 248 t~GtDVKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs 319 (1266)
. +..+-|-+++ +++++.-.|.... .+++..-.+..-...|++ +=+++|.++++++|.. ++.||++..
T Consensus 205 g-~~e~~v~v~~d~~g~~~~~~~~~~~~----~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~vEf~~~ 279 (451)
T PRK08591 205 N-PRHIEIQVLADGHGNAIHLGERDCSL----QRRHQKVLEEAPSPAITEELRRKIGEAAVKAAKAIGYRGAGTIEFLYE 279 (451)
T ss_pred C-CcEEEEEEEEcCCCCEEEEecccccc----eecceeEEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEc
Confidence 3 4456554444 3455543332110 011000000000123554 3346889999999975 334999987
Q ss_pred -CCCeEEEeecC
Q psy10158 320 -NGKSFVCDVNG 330 (1266)
Q Consensus 320 -~ggsyVcDVNG 330 (1266)
+|++||+|||.
T Consensus 280 ~~g~~~viEINp 291 (451)
T PRK08591 280 KNGEFYFIEMNT 291 (451)
T ss_pred CCCCEEEEEEEC
Confidence 78899999995
|
|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.4e-08 Score=108.96 Aligned_cols=199 Identities=16% Similarity=0.207 Sum_probs=115.2
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
+|++|+.. ..++ ..+.+.++..+ |++-++...-.+.+||....++|+++|||+|++..+.... +...
T Consensus 65 id~vi~~~--e~~l~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gIp~p~~~~~~~~~---------~~~~ 133 (423)
T TIGR00877 65 IDLAVIGP--EAPLVLGLVDALEEAGIPVFGPTKEAAQLEGSKAFAKDFMKRYGIPTAEYEVFTDPE---------EALS 133 (423)
T ss_pred CCEEEECC--chHHHHHHHHHHHHCCCeEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCeEEECCHH---------HHHH
Confidence 56666543 2344 45566777777 5566888899999999999999999999999998885311 1111
Q ss_pred eEEEcCeEecCC-EEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-Cccc-----ccCcceEEeeccCCCC
Q psy10158 178 HVEVNGIVFNKP-FVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRV-----RKSGSFIYEDFMPTDG 250 (1266)
Q Consensus 178 ~I~v~G~~~~kP-fVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~v-----r~~gSyIYEEFI~t~G 250 (1266)
.+. .+..| +|+||..|. .|.|++ +.+. ....... .... ..+..+|+||||+ |
T Consensus 134 ~~~----~~g~P~~VvKp~~~~-----------gg~Gv~-~v~~---~~el~~~~~~~~~~~~g~~~~~~lvEe~i~--G 192 (423)
T TIGR00877 134 YIQ----EKGAPAIVVKADGLA-----------AGKGVI-VAKT---NEEAIKAVEEILEQKFGDAGERVVIEEFLD--G 192 (423)
T ss_pred HHH----hcCCCeEEEEECCCC-----------CCCCEE-EECC---HHHHHHHHHHHHHHhcCCCCCeEEEEECcc--C
Confidence 221 23489 999999886 355653 3331 1110000 0000 1245799999997 5
Q ss_pred ceEEE--EEECCceeE-EeeccC-CCCCCceeecCCCCceeeEe-eCCHH-----HHHHHHHHHHHhC------Ccccee
Q psy10158 251 TDVKV--YTVGPDYAH-AEARKS-PALDGKVERDSEGKEIRYPV-ILSNA-----EKLISRKVCLAFK------QTVCGF 314 (1266)
Q Consensus 251 tDVKV--YtVGp~~vh-Ae~RKS-PvvDG~VRRN~hgKEiRypV-~LT~e-----EK~IA~kaakAFG------q~VCGf 314 (1266)
..+-| +.-|..+.. ..+|.- ...+|..--+..+-+.-.|. .|+++ .++++.++.++++ ..++.+
T Consensus 193 ~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~i~~~~~~aL~~~~~~~~G~~~i 272 (423)
T TIGR00877 193 EEVSLLAFVDGKTVIPMPPAQDHKRALEGDKGPNTGGMGAYSPAPVFTEEVEKRIAEEIVEPTVKGMRKEGTPYKGVLYA 272 (423)
T ss_pred ceEEEEEEEcCCeEEeceeeeeeeecccCCCCCCCCCCceecCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEeEEEE
Confidence 45444 433544332 122211 11222221111111222222 35443 2456666777774 367889
Q ss_pred eEEeeCCCeEEEeecC
Q psy10158 315 DLLRANGKSFVCDVNG 330 (1266)
Q Consensus 315 DLLRs~ggsyVcDVNG 330 (1266)
|++.+.+++||||||.
T Consensus 273 e~~~t~~g~~viEin~ 288 (423)
T TIGR00877 273 GLMLTKEGPKVLEFNC 288 (423)
T ss_pred EEEEECCCcEEEEEEc
Confidence 9999988899999994
|
This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes. |
| >PRK08654 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.9e-08 Score=113.56 Aligned_cols=195 Identities=16% Similarity=0.209 Sum_probs=123.2
Q ss_pred cceeeccccCCCcHH--HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 100 VDCLISFHSKGFPLE--KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~--KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
+|++++.| ||--+ ...+.++..+ +|+-++.....++.||....++|+++|||+|......-.. ..+..
T Consensus 75 ~daI~pg~--gflsE~~~~a~~~e~~gi~~iGps~~~i~~~~DK~~~k~~l~~~GVpv~p~~~~~v~~-------~~e~~ 145 (499)
T PRK08654 75 ADAIHPGY--GFLAENPEFAKACEKAGIVFIGPSSDVIEAMGSKINAKKLMKKAGVPVLPGTEEGIED-------IEEAK 145 (499)
T ss_pred CCEEEECC--CccccCHHHHHHHHHCCCcEECCCHHHHHHhCCHHHHHHHHHHcCcCCCCCcCcCCCC-------HHHHH
Confidence 68888876 45432 4455555555 5666888999999999999999999999998765431100 00111
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCc-cc-------ccCcceEEeeccCC
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-RV-------RKSGSFIYEDFMPT 248 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s-~v-------r~~gSyIYEEFI~t 248 (1266)
+.+. .+..|+|+||.+|. -|.|++ +.+. .. ++..-. .. -.++.++.|+||..
T Consensus 146 ~~a~----~igyPvvIKp~~Gg-----------GG~Gv~-iv~~---~~-eL~~a~~~~~~~a~~~f~~~~v~vE~~I~~ 205 (499)
T PRK08654 146 EIAE----EIGYPVIIKASAGG-----------GGIGMR-VVYS---EE-ELEDAIESTQSIAQSAFGDSTVFIEKYLEK 205 (499)
T ss_pred HHHH----HhCCCEEEEeCCCC-----------CCCeEE-EeCC---HH-HHHHHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 1111 23489999999986 255664 3331 11 111000 00 02567999999963
Q ss_pred CCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCceee-E-eeCCHHH----HHHHHHHHHHhCCccce-eeEEe
Q psy10158 249 DGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRY-P-VILSNAE----KLISRKVCLAFKQTVCG-FDLLR 318 (1266)
Q Consensus 249 ~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRy-p-V~LT~eE----K~IA~kaakAFGq~VCG-fDLLR 318 (1266)
+..|-|-++|+ +++|--.|...+ -|| |+|-+-+ | ..|+++. +++|.++++++|..=+| ||++-
T Consensus 206 -~r~ieVqvl~d~~G~vv~l~~recsi----qrr--~qk~ie~~Pa~~l~~~~~~~l~~~A~~l~~algy~g~gtVEfl~ 278 (499)
T PRK08654 206 -PRHIEIQILADKHGNVIHLGDRECSI----QRR--HQKLIEEAPSPIMTPELRERMGEAAVKAAKAINYENAGTVEFLY 278 (499)
T ss_pred -CcEEEEEEEEcCCCCEEEEeeecccc----ccC--ccceEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEE
Confidence 56677777764 466666664321 122 2232211 2 1366543 46799999999988766 99999
Q ss_pred eCCCeEEEeecC
Q psy10158 319 ANGKSFVCDVNG 330 (1266)
Q Consensus 319 s~ggsyVcDVNG 330 (1266)
.+|++||||||.
T Consensus 279 ~~g~~yflEiNp 290 (499)
T PRK08654 279 SNGNFYFLEMNT 290 (499)
T ss_pred ECCcEEEEEEEC
Confidence 889999999994
|
|
| >TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit | Back alignment and domain information |
|---|
Probab=98.57 E-value=2e-07 Score=107.76 Aligned_cols=198 Identities=13% Similarity=0.147 Sum_probs=114.3
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCcccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELV 173 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~ 173 (1266)
.||++++-+ ||-- ....+.++..+ ||+.++.....+++||....++|+++|||+|.+. .+.. . .
T Consensus 74 ~id~I~pg~--g~~se~~~~a~~~e~~Gi~~~g~~~~~~~~~~DK~~~r~~l~~~gip~pp~~~~~~~~-~--------~ 142 (449)
T TIGR00514 74 GADAIHPGY--GFLSENANFAEQCERSGFTFIGPSAESIRLMGDKVSAIETMKKAGVPCVPGSDGLVED-E--------E 142 (449)
T ss_pred CCCEEEeCC--CccccCHHHHHHHHHCCCcEECcCHHHHHHhCCHHHHHHHHHHCCCCCCCCcccCcCC-H--------H
Confidence 578888765 3311 11233445555 5677999999999999999999999999998864 2321 0 0
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cc-ccccCcceEEeeccCCC
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ES-RVRKSGSFIYEDFMPTD 249 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s-~vr~~gSyIYEEFI~t~ 249 (1266)
+..+.+. .+..|+|+||.+|. .|.|++ +.+....-...+.- .. ....++.+|.||||+.
T Consensus 143 e~~~~~~----~ig~PvvvKP~~g~-----------gs~Gv~-~v~~~~el~~~~~~~~~~~~~~~~~~~vlvEe~i~g- 205 (449)
T TIGR00514 143 ENVRIAK----RIGYPVIIKATAGG-----------GGRGMR-VVREPDELVKSISMTRAEAKAAFGNDGVYIEKYIEN- 205 (449)
T ss_pred HHHHHHH----HhCCCEEEEeCCCC-----------CCCccE-EECCHHHHHHHHHHHHHHHHHhCCCCCEEEEECCCC-
Confidence 0111111 23489999999987 355664 33321100000000 00 0013467999999953
Q ss_pred CceEEEEEEC---CceeEEeeccCCCCCCceeecCCCCceee--EeeCCHHH----HHHHHHHHHHhCCc-cceeeEEee
Q psy10158 250 GTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEIRY--PVILSNAE----KLISRKVCLAFKQT-VCGFDLLRA 319 (1266)
Q Consensus 250 GtDVKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgKEiRy--pV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs 319 (1266)
+..+-|-+++ +++++...|-. .+.+. +.+-+.+ +..|+++. +++|.++++++|.. ++.||++-.
T Consensus 206 ~~e~~v~v~~d~~g~~~~~~~~~~-----~~~~~-~~~~~~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~vef~~~ 279 (449)
T TIGR00514 206 PRHVEIQVLADKYGNAIYLGERDC-----SIQRR-HQKLLEEAPSPALTPELRRKMGDAAVKAAVSIGYRGAGTVEFLLD 279 (449)
T ss_pred CeEEEEEEEEcCCCCEEEEecccc-----Cceec-ccceEEECCCCCCCHHHHHHHHHHHHHHHHHCCCcceEEEEEEEe
Confidence 4555554544 34454433311 11111 1121111 22466543 35688999999975 445999887
Q ss_pred -CCCeEEEeecC
Q psy10158 320 -NGKSFVCDVNG 330 (1266)
Q Consensus 320 -~ggsyVcDVNG 330 (1266)
+|++||+|||.
T Consensus 280 ~~g~~~viEiNp 291 (449)
T TIGR00514 280 KNGEFYFMEMNT 291 (449)
T ss_pred CCCCEEEEEEEC
Confidence 78899999993
|
This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification. |
| >PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-07 Score=108.98 Aligned_cols=199 Identities=12% Similarity=0.136 Sum_probs=110.6
Q ss_pred cceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 100 VDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 100 cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.|++|+.+ |+-. ..+.+.++..+ |+.-++..+-.+.+||....++|.++|||+|++....... ..+..
T Consensus 75 id~I~p~~--~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~k~~l~~~gIp~p~~~~~~~~~-------~~e~~ 145 (450)
T PRK06111 75 AEAIHPGY--GLLSENASFAERCKEEGIVFIGPSADIIAKMGSKIEARRAMQAAGVPVVPGITTNLED-------AEEAI 145 (450)
T ss_pred CCEEEeCC--CccccCHHHHHHHHHCCCeEECCCHHHHHHhCCHHHHHHHHHHCCCCCCCCcCcCcCC-------HHHHH
Confidence 36677654 2211 22344555555 4556888888999999999999999999999873221111 01111
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---C-cccccCcceEEeeccCCCCce
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---E-SRVRKSGSFIYEDFMPTDGTD 252 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~-s~vr~~gSyIYEEFI~t~GtD 252 (1266)
+++. .+..|+|+||.+|. .|.|+. +.+....-...+.. . .....++.+|.||||.- +..
T Consensus 146 ~~~~----~~~~P~VvKP~~g~-----------gs~Gv~-iv~~~~el~~a~~~~~~~~~~~~~~~~~lvEe~i~g-~~e 208 (450)
T PRK06111 146 AIAR----QIGYPVMLKASAGG-----------GGIGMQ-LVETEQELTKAFESNKKRAANFFGNGEMYIEKYIED-PRH 208 (450)
T ss_pred HHHH----HhCCCEEEEeCCCC-----------CCceEE-EECCHHHHHHHHHHHHHHHHHhcCCCcEEEEcccCC-CcE
Confidence 1111 23489999999986 345553 22211100000000 0 00012567999999973 345
Q ss_pred EEEEEEC---CceeEEeeccCCCCCCceeecCCCCcee-eEe-eCC----HHHHHHHHHHHHHhCC-ccceeeEEeeCCC
Q psy10158 253 VKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEIR-YPV-ILS----NAEKLISRKVCLAFKQ-TVCGFDLLRANGK 322 (1266)
Q Consensus 253 VKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgKEiR-ypV-~LT----~eEK~IA~kaakAFGq-~VCGfDLLRs~gg 322 (1266)
+-+-+++ ++.++.-.|..++.. . |.+-.. .+. .++ .+=+++|.++++++|. .++.||++...++
T Consensus 209 ~~v~v~~~~~g~~~~~~~~~~~~~~----~--~~~~~~~~p~~~~~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~~~g 282 (450)
T PRK06111 209 IEIQLLADTHGNTVYLWERECSVQR----R--HQKVIEEAPSPFLDEETRKAMGERAVQAAKAIGYTNAGTIEFLVDEQK 282 (450)
T ss_pred EEEEEEEcCCCCEEEEEeecccccc----c--ccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCCCceeEEEEEcCCC
Confidence 5554443 334444333322110 0 111000 011 133 2345788899999998 5777999987665
Q ss_pred -eEEEeecC
Q psy10158 323 -SFVCDVNG 330 (1266)
Q Consensus 323 -syVcDVNG 330 (1266)
+||||||.
T Consensus 283 ~~~viEiN~ 291 (450)
T PRK06111 283 NFYFLEMNT 291 (450)
T ss_pred CEEEEEEEC
Confidence 99999995
|
|
| >PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.7e-07 Score=100.15 Aligned_cols=195 Identities=16% Similarity=0.259 Sum_probs=143.8
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccc--cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVI--NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~l--Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.|+++|.+..-+ |.+-.+-|+..+.-++ -+.++..++.||.+-|+.++++|||+|.+..++.- .+|...-.
T Consensus 67 Idv~~P~~~~~~-l~~~r~~F~a~Gv~l~~~~~~~~l~~~~dK~~~y~~~~~~~ipvp~~~~v~t~------~el~~a~~ 139 (329)
T PF15632_consen 67 IDVFVPGRNREL-LAAHRDEFEALGVKLLTASSAETLELADDKAAFYEFMEANGIPVPPYWRVRTA------DELKAAYE 139 (329)
T ss_pred CeEEEcCccHHH-HHHHHHHHHHhCCEEEecCCHHHHHHHhhHHHHHHHHHhCCCCCCCEEEeCCH------HHHHHHHH
Confidence 567777776666 7788888887777555 46788999999999999999999999999998641 12322233
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCc-cc------------ccCcceEEee
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-RV------------RKSGSFIYED 244 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s-~v------------r~~gSyIYEE 244 (1266)
.+...| +|+.+||..|. -|.|.++|-+....-...+.|++ .+ ..--.+|..|
T Consensus 140 ~l~~~~----~~~CvKP~~g~-----------gg~GFr~l~~~~~~l~~l~~~~~~~i~~~~~~~~l~~~~~~~~llvMe 204 (329)
T PF15632_consen 140 ELRFPG----QPLCVKPAVGI-----------GGRGFRVLDESRDELDALFEPDSRRISLDELLAALQRSEEFPPLLVME 204 (329)
T ss_pred hcCCCC----ceEEEecccCC-----------CcceEEEEccCcchHHHhcCCCcceeCHHHHHHHHhccCCCCCcEEec
Confidence 344555 89999999998 36676544443333333444432 11 1467889999
Q ss_pred ccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHhCCc-cceeeEEe-eCCC
Q psy10158 245 FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT-VCGFDLLR-ANGK 322 (1266)
Q Consensus 245 FI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAFGq~-VCGfDLLR-s~gg 322 (1266)
|++-.---|=|..-++++++|-.|+=- |.+..+.-.++=-++|.++|++||++ +.+|.+-. .+|+
T Consensus 205 yL~G~EySVD~l~~~G~viaaV~R~K~-------------G~~q~l~~~~~l~e~a~~l~~~~~l~g~~NiQ~r~d~~g~ 271 (329)
T PF15632_consen 205 YLPGPEYSVDCLADEGRVIAAVPRRKL-------------GRRQVLENDEELIELARRLAEAFGLDGLFNIQFRYDEDGN 271 (329)
T ss_pred CCCCCeEEEEEEecCCEEEEEEEEEec-------------CceeEEEECHHHHHHHHHHHHHhCCCceEEEEEEEcCCCC
Confidence 999544555566777888888888761 25667777888889999999999997 56899888 7999
Q ss_pred eEEEeec
Q psy10158 323 SFVCDVN 329 (1266)
Q Consensus 323 syVcDVN 329 (1266)
|+++|+|
T Consensus 272 p~LLEIN 278 (329)
T PF15632_consen 272 PKLLEIN 278 (329)
T ss_pred EEEEEeC
Confidence 9999999
|
|
| >PLN02257 phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
Probab=98.47 E-value=9.6e-07 Score=102.95 Aligned_cols=193 Identities=15% Similarity=0.144 Sum_probs=114.5
Q ss_pred CcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecC
Q psy10158 111 FPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNK 188 (1266)
Q Consensus 111 fPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~k 188 (1266)
+|+ ....++++..+ |+.-.+..+-.+.+||....++|+++|||+|++..+... .+...++. .+..
T Consensus 72 ~~lv~~~~d~l~~~Gi~~~Gps~~aa~l~~dK~~~K~~l~~~GIptp~~~~~~~~---------~e~~~~~~----~~g~ 138 (434)
T PLN02257 72 APLVAGLADDLVKAGIPTFGPSAEAAALEGSKNFMKDLCDKYKIPTAKYETFTDP---------AAAKKYIK----EQGA 138 (434)
T ss_pred hHHHHHHHHHHHHCCCCEECChHHHHHHHcCHHHHHHHHHHcCCCCCCeEEeCCH---------HHHHHHHH----HcCC
Confidence 455 45556666654 344467777788899999999999999999998877531 11122221 2347
Q ss_pred CEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cccc-ccCcceEEeeccCCCCceEEEEE--ECCce
Q psy10158 189 PFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ESRV-RKSGSFIYEDFMPTDGTDVKVYT--VGPDY 262 (1266)
Q Consensus 189 PfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s~v-r~~gSyIYEEFI~t~GtDVKVYt--VGp~~ 262 (1266)
|+|+||..|. .|.|+. +.+........+.. .... ..+..+|.||||. |..+-|.+ =|..+
T Consensus 139 PvVVKp~~~~-----------~GkGV~-iv~~~~el~~a~~~~~~~~~fg~~~~~vlIEefi~--G~E~Sv~~~~dG~~~ 204 (434)
T PLN02257 139 PIVVKADGLA-----------AGKGVV-VAMTLEEAYEAVDSMLVKGAFGSAGSEVVVEEFLD--GEEASFFALVDGENA 204 (434)
T ss_pred CEEEEcCCCC-----------CCCCEE-EECCHHHHHHHHHHHHhhhhccCCCCeEEEEECCC--CCEEEEEEEECCCcE
Confidence 9999999776 477774 33321110000000 0001 1245799999997 44555533 23333
Q ss_pred eEE-ee-ccCCCCCCceeecCCCCceeeEee-CCHHHHH-HHHH-------HHHHhCCccce---eeEEee--CCCeEEE
Q psy10158 263 AHA-EA-RKSPALDGKVERDSEGKEIRYPVI-LSNAEKL-ISRK-------VCLAFKQTVCG---FDLLRA--NGKSFVC 326 (1266)
Q Consensus 263 vhA-e~-RKSPvvDG~VRRN~hgKEiRypV~-LT~eEK~-IA~k-------aakAFGq~VCG---fDLLRs--~ggsyVc 326 (1266)
..- +. ..-.+.||+..-|+.|-+.-.|.. |+++..+ ++.. +.++.|....| +|++-. +|+|||+
T Consensus 205 ~pl~~~~dhkr~~d~d~g~ntggmg~~sp~p~l~~~~~~~i~~~i~~~~~~al~~~g~~y~Gvl~ve~ml~~~~g~p~vL 284 (434)
T PLN02257 205 IPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTPELESKVMETIIYPTVKGMAAEGCKFVGVLYAGLMIEKKSGLPKLL 284 (434)
T ss_pred EEEEeeeecccccCCCCCCCCCCCeeEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEEcCCCCEEEE
Confidence 321 11 133456888888887655544553 7764433 3333 33466776556 576655 5679999
Q ss_pred eecC
Q psy10158 327 DVNG 330 (1266)
Q Consensus 327 DVNG 330 (1266)
|+|-
T Consensus 285 E~N~ 288 (434)
T PLN02257 285 EYNV 288 (434)
T ss_pred EEEC
Confidence 9994
|
|
| >PRK06395 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.6e-07 Score=105.49 Aligned_cols=204 Identities=15% Similarity=0.115 Sum_probs=121.1
Q ss_pred cceeeccccCCCcHHHH-HHHHhhcCCcc-ccCccchhhhhHHHHHHHHHHhcCCCCCCeE-EeccCCCCCccccccccC
Q psy10158 100 VDCLISFHSKGFPLEKA-IKYANLRKPFV-INNLNMQYDIQDRRKVYALLEKEGIEIPRYA-VLDRESPDPVKHELVESE 176 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KA-i~Y~klrkp~~-lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv-~~~rd~~~~~~~~l~e~~ 176 (1266)
.|.+|+.. +-||..+ ...++..+..+ ..+...-.+.+||....+.|.++|||+|.+. .+... . +...
T Consensus 66 id~Vi~~~--d~~l~~~~~~~l~~~Gi~v~gps~~~a~~e~dK~~~k~~l~~~gIptp~~~~~~~~~-~-----e~~~-- 135 (435)
T PRK06395 66 VDIVFVGP--DPVLATPLVNNLLKRGIKVASPTMEAAMIETSKMFMRYLMERHNIPGNINFNACFSE-K-----DAAR-- 135 (435)
T ss_pred CCEEEECC--ChHHHHHHHHHHHHCCCcEECCCHHHHHHhhCHHHHHHHHHHCCcCCCcccceeCCh-H-----HHHH--
Confidence 57777753 3456332 34444445443 4778888899999999999999999998543 44211 0 0000
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcc-cccCcceEEeeccCCCCceEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESR-VRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~-vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
.+..+ ..|+|+||.++. .|.|+..+..+..+....+..-.. ..+++.+|.||||.-.--.|=+
T Consensus 136 ~~~~~-----~~PvVVKP~~~s-----------ggkGV~v~~~~~~~~~ea~~~~~~~~~~~~~viIEEfl~G~E~Svd~ 199 (435)
T PRK06395 136 DYITS-----MKDVAVKPIGLT-----------GGKGVKVTGEQLNSVDEAIRYAIEILDRDGVVLIEKKMTGEEFSLQA 199 (435)
T ss_pred HHHhh-----CCCEEEEeCCCC-----------CCCCeEEecCchhhHHHHHHHHHHHhCCCCcEEEEeecCCceEEEEE
Confidence 01122 389999999987 577886333222211111110011 1346789999999632356667
Q ss_pred EEECCceeEE-eecc-CCCCCCceeecCCCCceee-----EeeCCHHHH----HHHHHHHHHhCC------ccceeeEEe
Q psy10158 256 YTVGPDYAHA-EARK-SPALDGKVERDSEGKEIRY-----PVILSNAEK----LISRKVCLAFKQ------TVCGFDLLR 318 (1266)
Q Consensus 256 YtVGp~~vhA-e~RK-SPvvDG~VRRN~hgKEiRy-----pV~LT~eEK----~IA~kaakAFGq------~VCGfDLLR 318 (1266)
|+-|..+..- ..+. -.+.||++-=|+.|=+.-. +-.|+++++ +|+.+++++++. -|..+++.-
T Consensus 200 ~~dg~~~~~l~~~~d~~r~~~~d~gp~tGgmG~~s~~~~~~p~l~~~~~~~i~~i~~~~~~~l~~~~~~~~G~l~~~~~l 279 (435)
T PRK06395 200 FSDGKHLSFMPIVQDYKRAYEGDHGPNTGGMGSISDRDFSLPFLSKDAPERAKHILNDIIRAMKDENNPFKGIMYGQFMD 279 (435)
T ss_pred EEcCCeEEEecccceeeecccCCCCCccCCCccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEE
Confidence 7766664221 1110 1123666555554433221 123776554 667788899994 445688888
Q ss_pred eCCCeEEEeec
Q psy10158 319 ANGKSFVCDVN 329 (1266)
Q Consensus 319 s~ggsyVcDVN 329 (1266)
++++|||+|+|
T Consensus 280 t~~gp~ViE~n 290 (435)
T PRK06395 280 TPNGVKVIEIN 290 (435)
T ss_pred eCCCcEEEEEe
Confidence 99999999999
|
|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.6e-07 Score=115.50 Aligned_cols=194 Identities=15% Similarity=0.185 Sum_probs=120.3
Q ss_pred cceeeccccCCCcHHHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.|.+|+-|+...++ ++..-++..+ |+.-++.+....+.||.+..++|++.|||+|++..+.... +....
T Consensus 631 ~dgVI~~~g~~~~~-~la~~le~~Gi~ilG~s~e~i~~~~DK~~f~~ll~~~GIp~P~~~~~~s~e---------e~~~~ 700 (1068)
T PRK12815 631 IKGVIVQFGGQTAI-NLAKGLEEAGLTILGTSPDTIDRLEDRDRFYQLLDELGLPHVPGLTATDEE---------EAFAF 700 (1068)
T ss_pred CCEEEEecCcHHHH-HHHHHHHHCCCeEECCcHHHHHHHcCHHHHHHHHHHcCcCCCCeEEeCCHH---------HHHHH
Confidence 68888877665433 2222233333 5566889999999999999999999999999999885311 11111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCcccc--ccCCcccccCcceEEeeccCCCCceEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV--YSPESRVRKSGSFIYEDFMPTDGTDVKVY 256 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~--y~p~s~vr~~gSyIYEEFI~t~GtDVKVY 256 (1266)
+. .+..|+|+||..|. .|.|+. +.+ |.... |..+ ....+..+|.||||....-+|-++
T Consensus 701 ~~----~igyPvVVKP~~~~-----------Gg~gv~-iv~---~~eeL~~~l~~-~~s~~~~vlIeefI~G~E~~Vd~i 760 (1068)
T PRK12815 701 AK----RIGYPVLIRPSYVI-----------GGQGMA-VVY---DEPALEAYLAE-NASQLYPILIDQFIDGKEYEVDAI 760 (1068)
T ss_pred HH----hcCCCEEEEeCCCC-----------CCCCEE-EEC---CHHHHHHHHHH-hhcCCCCEEEEEeecCceEEEEEE
Confidence 11 23489999999885 244543 222 11100 0000 122467899999994333555555
Q ss_pred EECCceeE-E-eeccCCCCCCceeecCCCCcee---eEeeCCHH----HHHHHHHHHHHhCC-ccceeeEEeeCCCeEEE
Q psy10158 257 TVGPDYAH-A-EARKSPALDGKVERDSEGKEIR---YPVILSNA----EKLISRKVCLAFKQ-TVCGFDLLRANGKSFVC 326 (1266)
Q Consensus 257 tVGp~~vh-A-e~RKSPvvDG~VRRN~hgKEiR---ypV~LT~e----EK~IA~kaakAFGq-~VCGfDLLRs~ggsyVc 326 (1266)
.=|..++. + +.+.. +...|.|... .|..|+++ =+++|.++++++|. .++.||++..++++|||
T Consensus 761 ~dg~~v~i~~i~e~~e-------~~gv~sGds~~v~pp~~l~~~~~~~i~~~a~ki~~~L~~~G~~niqf~v~~~~~yvi 833 (1068)
T PRK12815 761 SDGEDVTIPGIIEHIE-------QAGVHSGDSIAVLPPQSLSEEQQEKIRDYAIKIAKKLGFRGIMNIQFVLANDEIYVL 833 (1068)
T ss_pred EcCCceEEeeEEEEee-------ccCCcCCCeeEEECCCCCCHHHHHHHHHHHHHHHHHcCCccEEEEEEEEECCcEEEE
Confidence 55554322 1 22111 1224555543 24467764 34678899999984 46669999999999999
Q ss_pred eecC
Q psy10158 327 DVNG 330 (1266)
Q Consensus 327 DVNG 330 (1266)
|||-
T Consensus 834 EiNp 837 (1068)
T PRK12815 834 EVNP 837 (1068)
T ss_pred EEeC
Confidence 9994
|
|
| >TIGR01235 pyruv_carbox pyruvate carboxylase | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.2e-07 Score=117.37 Aligned_cols=197 Identities=18% Similarity=0.202 Sum_probs=120.4
Q ss_pred cceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEe-ccCCCCCcccccccc
Q psy10158 100 VDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVL-DRESPDPVKHELVES 175 (1266)
Q Consensus 100 cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~-~rd~~~~~~~~l~e~ 175 (1266)
+|+++|-| ||-- ....+.++..+ +|+-++.....+++||....++|.++|||+|..... -.+ ..+.
T Consensus 75 iDaI~PGy--GflsE~~~~a~~le~~Gi~fiGps~e~i~~~~DK~~ar~la~~~GVPvpp~t~~~v~~--------~eea 144 (1143)
T TIGR01235 75 VDAIHPGY--GFLSENSEFADACNKAGIIFIGPKAEVMDQLGDKVAARNLAIKAGVPVVPGTDGPPET--------MEEV 144 (1143)
T ss_pred CCEEEECC--CccccCHHHHHHHHHcCCcccCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccCcCC--------HHHH
Confidence 67888765 3422 22334445544 567788999999999999999999999999986532 111 0111
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cc-ccccCcceEEeeccCCCCc
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ES-RVRKSGSFIYEDFMPTDGT 251 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s-~vr~~gSyIYEEFI~t~Gt 251 (1266)
.+... .+..|+|+||..|. -|.|++ +.+....-...|.- ++ .--.++.++.|+||. ++.
T Consensus 145 ~~~ae----~iGyPvIVKP~~GG-----------GGrG~r-iV~~~eEL~~a~~~a~~ea~~~fg~~~vlIEefI~-g~r 207 (1143)
T TIGR01235 145 LDFAA----AIGYPVIIKASWGG-----------GGRGMR-VVRSEADVADAFQRAKSEAKAAFGNDEVYVEKLIE-RPR 207 (1143)
T ss_pred HHHHH----HcCCCEEEEECCCC-----------CCCccE-EeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCC-CCe
Confidence 11111 23489999999986 255653 33321100000000 00 000256799999994 357
Q ss_pred eEEEEEECCc---eeEEeeccCCCCCCceeecCCCC--ceeeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEEee-C
Q psy10158 252 DVKVYTVGPD---YAHAEARKSPALDGKVERDSEGK--EIRYPVILSNAE----KLISRKVCLAFKQT-VCGFDLLRA-N 320 (1266)
Q Consensus 252 DVKVYtVGp~---~vhAe~RKSPvvDG~VRRN~hgK--EiRypV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs-~ 320 (1266)
.|.|-++|.. ++|...|-.. +.|. |.| |..-...|+++. .++|.++++++|.. ++.||+|.. +
T Consensus 208 eIeVqVlgD~~G~vv~l~eRdcs-----vqrr-~qk~ie~aPa~~L~~e~r~~I~~~A~kla~aLgy~G~gtVEFlvd~d 281 (1143)
T TIGR01235 208 HIEVQLLGDKHGNVVHLFERDCS-----VQRR-HQKVVEVAPAPYLSREVRDEIAEYAVKLAKAVNYINAGTVEFLVDND 281 (1143)
T ss_pred EEEEEEEEeCCCCEEEEEecccc-----cccc-CceEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEeCC
Confidence 7888888654 6777767542 2221 222 222123566643 46889999999955 566999986 5
Q ss_pred CCeEEEeec
Q psy10158 321 GKSFVCDVN 329 (1266)
Q Consensus 321 ggsyVcDVN 329 (1266)
|++||+|||
T Consensus 282 g~~yfIEVN 290 (1143)
T TIGR01235 282 GKFYFIEVN 290 (1143)
T ss_pred CcEEEEEee
Confidence 789999999
|
This enzyme plays a role in gluconeogensis but not glycolysis. |
| >PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-06 Score=102.51 Aligned_cols=197 Identities=14% Similarity=0.156 Sum_probs=116.6
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCcccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELV 173 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~ 173 (1266)
.+|++++.| ||-- ....+.++..+ +|+-++.....+++||....++|.++|||+|... .+.. . .
T Consensus 77 ~~daI~pg~--g~lsE~~~~~~~~e~~gi~~igps~~ai~~~~DK~~~r~~l~~~GIp~~p~~~~~v~~-~--------~ 145 (467)
T PRK12833 77 GADAIHPGY--GFLSENAAFAEAVEAAGLIFVGPDAQTIRTMGDKARARRTARRAGVPTVPGSDGVVAS-L--------D 145 (467)
T ss_pred CCCEEEECC--CccccCHHHHHHHHHcCCCccCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCcCcCcCC-H--------H
Confidence 478888865 3322 12233344444 6778899999999999999999999999998775 3321 0 0
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---C--cccccCcceEEeeccCC
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---E--SRVRKSGSFIYEDFMPT 248 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~--s~vr~~gSyIYEEFI~t 248 (1266)
+..... ..+..|+|+||..|. .|.|++ +.+....-...|.- + ..+ .++.++.|+||+.
T Consensus 146 e~~~~~----~~igyPvvvKp~~gg-----------gg~Gv~-~v~~~~eL~~a~~~~~~~~~~~~-~~~~vlvEefi~~ 208 (467)
T PRK12833 146 AALEVA----ARIGYPLMIKAAAGG-----------GGRGIR-VAHDAAQLAAELPLAQREAQAAF-GDGGVYLERFIAR 208 (467)
T ss_pred HHHHHH----HHhCCCEEEEECCCC-----------CCCeEE-EECCHHHHHHHHHHHHHHHHHhc-CCCcEEEEecCCC
Confidence 011111 123489999999987 356664 33321100000000 0 001 2567999999975
Q ss_pred CCceEEEEEECCc--eeEEeeccCCCCCCceeecCCCCcee-e-EeeCCHH----HHHHHHHHHHHhCCc-cceeeEEee
Q psy10158 249 DGTDVKVYTVGPD--YAHAEARKSPALDGKVERDSEGKEIR-Y-PVILSNA----EKLISRKVCLAFKQT-VCGFDLLRA 319 (1266)
Q Consensus 249 ~GtDVKVYtVGp~--~vhAe~RKSPvvDG~VRRN~hgKEiR-y-pV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs 319 (1266)
|..|-|-++|+. ++|.-.|..- +.|. +.|-.. . +..|+++ =+++|.++++++|.. ++.||++..
T Consensus 209 -~~ei~v~v~~dg~~~~~~~~~~~~-----~~r~-~~ki~e~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~ 281 (467)
T PRK12833 209 -ARHIEVQILGDGERVVHLFERECS-----LQRR-RQKILEEAPSPSLTPAQRDALCASAVRLARQVGYRGAGTLEYLFD 281 (467)
T ss_pred -CEEEEEEEEeCCCcEEEEEEeecc-----cccC-CccEEEECCCCCCCHHHHHHHHHHHHHHHHHcCCcCcceEEEEEe
Confidence 577777777653 4554444221 1110 111111 1 1246653 345889999999986 345898875
Q ss_pred --CCCeEEEeecC
Q psy10158 320 --NGKSFVCDVNG 330 (1266)
Q Consensus 320 --~ggsyVcDVNG 330 (1266)
+|++||+|||.
T Consensus 282 ~~~g~~~~iEvNp 294 (467)
T PRK12833 282 DARGEFYFIEMNT 294 (467)
T ss_pred cCCCCEEEEEEEC
Confidence 37799999995
|
|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.3e-07 Score=113.11 Aligned_cols=195 Identities=13% Similarity=0.196 Sum_probs=123.6
Q ss_pred ccceeeccccCCCcHHHHHH---HHhh----------cCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCC
Q psy10158 99 IVDCLISFHSKGFPLEKAIK---YANL----------RKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESP 165 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~---Y~kl----------rkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~ 165 (1266)
.+|++|+-|+...|+.-|.. ++.. .-+++..+.+...+..||.+..++|+++|||+|++..+....
T Consensus 649 ~~d~Vi~~~Ggq~~l~la~~l~~~L~e~~~fa~~~~~gi~i~G~s~e~i~i~~DK~~~k~~l~~~GIp~p~~~~v~s~e- 727 (1102)
T PLN02735 649 RPDGIIVQFGGQTPLKLALPIQKYLDKNPPPSASGNGNVKIWGTSPDSIDAAEDRERFNAILNELKIEQPKGGIARSEA- 727 (1102)
T ss_pred CCCEEEECCCchHHHHHHHHHHHHHHhccchhhhhcCCeEEECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeeEeCCHH-
Confidence 37899999988887643222 2221 124677889999999999999999999999999998775310
Q ss_pred CCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cc-ccccCcceE
Q psy10158 166 DPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ES-RVRKSGSFI 241 (1266)
Q Consensus 166 ~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s-~vr~~gSyI 241 (1266)
+....+. .+..|+|+||..|. .|.|+. +.+ |.. ++.. .. ....++.+|
T Consensus 728 --------ea~~~a~----~iGyPvvVKP~~g~-----------gG~G~~-iV~---~~e-eL~~al~~a~~~~~~~~vl 779 (1102)
T PLN02735 728 --------DALAIAK----RIGYPVVVRPSYVL-----------GGRAME-IVY---SDD-KLKTYLETAVEVDPERPVL 779 (1102)
T ss_pred --------HHHHHHH----hcCCCeEEEeCCCC-----------CCCcEE-EEC---CHH-HHHHHHHHHHHhcCCCCEE
Confidence 1111111 23589999999975 355653 222 211 1110 00 112356799
Q ss_pred EeeccCCCCceEEEEEECC---ceeE--EeeccCCCCCCceeecCCCCceeeEe---eCCHHH----HHHHHHHHHHhCC
Q psy10158 242 YEDFMPTDGTDVKVYTVGP---DYAH--AEARKSPALDGKVERDSEGKEIRYPV---ILSNAE----KLISRKVCLAFKQ 309 (1266)
Q Consensus 242 YEEFI~t~GtDVKVYtVGp---~~vh--Ae~RKSPvvDG~VRRN~hgKEiRypV---~LT~eE----K~IA~kaakAFGq 309 (1266)
.|+||. +|.-|=|-++++ +++. .+.+. -+...|.|+....+ .|+++. +++|.++++++|.
T Consensus 780 VEefI~-~g~Ei~V~vl~D~~G~vv~~~i~e~~-------~~~gvhsGds~~~~P~~~L~~e~~~~i~~~a~ki~~~L~~ 851 (1102)
T PLN02735 780 VDKYLS-DATEIDVDALADSEGNVVIGGIMEHI-------EQAGVHSGDSACSLPTQTIPSSCLATIRDWTTKLAKRLNV 851 (1102)
T ss_pred EEEecC-CcEEEEEEEEECCCCCEEEecceEee-------eccCccCCCccEEecCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 999995 366666666653 2221 11111 11223555554443 577655 4679999999985
Q ss_pred -ccceeeEEee-CCCeEEEeecC
Q psy10158 310 -TVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 310 -~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
.++.+|++-. +|++||+|||-
T Consensus 852 ~G~~~vqf~v~~dg~~yviEiNp 874 (1102)
T PLN02735 852 CGLMNCQYAITPSGEVYIIEANP 874 (1102)
T ss_pred cceeeEEEEEcCCCcEEEEEEeC
Confidence 4677999885 78899999994
|
|
| >PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.8e-06 Score=103.41 Aligned_cols=255 Identities=14% Similarity=0.176 Sum_probs=151.7
Q ss_pred CeEEEEEEecCC----ccCChhHHHHHHHHhhcCcEEEEEe-cccc--cc--cccccc------------------cccc
Q psy10158 49 KQVIVGVCAMAK----KSQSKPMKEILTRLEEFEFIKMIVF-SEET--IQ--KPVDEW------------------PIVD 101 (1266)
Q Consensus 49 ~~i~iGVCAMd~----Ka~SkPMr~IL~RL~~~g~f~viiF-~dkv--IL--e~vE~W------------------P~cD 101 (1266)
++.+|+|.+=-. -+--+-=++|++-|.+.++ +|+.+ -++. .. +.+..| ..+|
T Consensus 450 ~~~~i~vl~GG~S~E~~vSl~s~~~v~~al~~~~~-~v~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 528 (809)
T PRK14573 450 KKLSLGLVCGGKSCEHDISLLSAKNIAKYLSPEFY-DVSYFLINRQGLWETVSSLETAIEEDSGKSVLSSEIAQALAKVD 528 (809)
T ss_pred CCcEEEEEECCCCCchHHHHHhHHHHHHhhcccCc-EEEEEEECCCCeEEecccccccccccccccccchhhhhccccCC
Confidence 356677765322 2222345788888877664 55533 2221 11 111111 3478
Q ss_pred eeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 102 CLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 102 ~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
++++-..-++=. -....++++.+ ||+=.+..+.++.+||..+-++|+++|||+|++..+.+.......... ....+
T Consensus 529 ~vf~~lhG~~gedg~iq~~le~~gipy~Gs~~~asal~~DK~~~K~~l~~~GIpt~~~~~~~~~~~~~~~~~~--~~~~~ 606 (809)
T PRK14573 529 VVLPILHGPFGEDGTMQGFLEIIGKPYTGPSLAFSAIAMDKVLTKRFASDVGVPVVPYQPLTLAGWKREPELC--LAHIV 606 (809)
T ss_pred EEEEcCCCCCCCChHHHHHHHHcCCCeeCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEechhcccChHHH--HHHHH
Confidence 877665332334 36778888887 566679999999999999999999999999999888642100000000 00011
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC--cccccCcceEEeeccCCCCceEEEEE
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE--SRVRKSGSFIYEDFMPTDGTDVKVYT 257 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~--s~vr~~gSyIYEEFI~t~GtDVKVYt 257 (1266)
..|..|+|+||.++- .+.|+. ++.|.. ++..- .....+..+|.|||+. +|+.+-|-+
T Consensus 607 ----~~lg~P~iVKP~~~G-----------sS~Gv~----~v~~~~-el~~a~~~a~~~~~~vlVEe~i~-~grEi~v~v 665 (809)
T PRK14573 607 ----EAFSFPMFVKTAHLG-----------SSIGVF----EVHNVE-ELRDKISEAFLYDTDVFVEESRL-GSREIEVSC 665 (809)
T ss_pred ----HhcCCCEEEeeCCCC-----------CCCCEE----EECCHH-HHHHHHHHHHhcCCcEEEEeccC-CCEEEEEEE
Confidence 124589999999975 245653 232222 11111 0122456799999986 479999999
Q ss_pred ECCce---eEE--eeccCCCCCCc--eeecC--CCC---ceeeEeeCCHH----HHHHHHHHHHHhCC-ccceeeEEee-
Q psy10158 258 VGPDY---AHA--EARKSPALDGK--VERDS--EGK---EIRYPVILSNA----EKLISRKVCLAFKQ-TVCGFDLLRA- 319 (1266)
Q Consensus 258 VGp~~---vhA--e~RKSPvvDG~--VRRN~--hgK---EiRypV~LT~e----EK~IA~kaakAFGq-~VCGfDLLRs- 319 (1266)
+|..- +.+ ..+.. ..+. +..+- +|+ .+.+|..|+++ =+++|.++++++|. .+|.||++-.
T Consensus 666 l~~~~~~~~~~~~~e~~~--~~~f~dy~~Ky~~~g~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~riDf~v~~ 743 (809)
T PRK14573 666 LGDGSSAYVIAGPHERRG--SGGFIDYQEKYGLSGKSSAQIVFDLDLSKESQEQVLELAERIYRLLQGKGSCRIDFFLDE 743 (809)
T ss_pred EeCCCCceEeccceEEcc--CCCeeCchhcccCCCCCceEEecCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEcC
Confidence 98752 221 22222 1121 11222 333 23456677764 35678899999995 4677998876
Q ss_pred CCCeEEEeec
Q psy10158 320 NGKSFVCDVN 329 (1266)
Q Consensus 320 ~ggsyVcDVN 329 (1266)
+|.+||+|||
T Consensus 744 ~g~~yv~EiN 753 (809)
T PRK14573 744 EGNFWLSEMN 753 (809)
T ss_pred CCCEEEEEee
Confidence 5789999999
|
|
| >PRK12999 pyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.4e-06 Score=111.83 Aligned_cols=198 Identities=17% Similarity=0.190 Sum_probs=118.5
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEE--eccCCCCCcccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAV--LDRESPDPVKHELV 173 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~--~~rd~~~~~~~~l~ 173 (1266)
.+|++++.| ||-- ....+.++..+ +|+-++.....+++||....++|.++|||+|.... +.. . .
T Consensus 78 ~iDaI~Pgy--GflsE~~~~a~~~e~~Gi~fiGps~eai~~~~DK~~~r~~l~~~GVPv~P~~~~~v~s-~--------e 146 (1146)
T PRK12999 78 GVDAIHPGY--GFLSENPEFARACAEAGITFIGPTAEVLRLLGDKVAARNAAIKAGVPVIPGSEGPIDD-I--------E 146 (1146)
T ss_pred CCCEEEeCC--CccccCHHHHHHHHHcCCcccCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCcccCCCC-H--------H
Confidence 378888865 4322 12233344444 56778999999999999999999999999976543 321 0 0
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC---Cc-ccccCcceEEeeccCCC
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ES-RVRKSGSFIYEDFMPTD 249 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p---~s-~vr~~gSyIYEEFI~t~ 249 (1266)
+..+.. ..+..|+|+||.+|. .|.|++ +.+....-...|.- ++ ....++.+++|+||.-
T Consensus 147 ea~~~a----~~iGyPvVVKP~~Gg-----------GGrGv~-vV~~~eEL~~a~~~a~~ea~~~fg~~~vlVEefI~g- 209 (1146)
T PRK12999 147 EALEFA----EEIGYPIMLKASAGG-----------GGRGMR-IVRSEEELEEAFERAKREAKAAFGNDEVYLEKYVEN- 209 (1146)
T ss_pred HHHHHH----HHhCCCEEEEECCCC-----------CCCCeE-EeCCHHHHHHHHHHHHHHHHhhcCCCcEEEecCCCC-
Confidence 111111 123489999999996 255653 33321100000100 00 0012578999999973
Q ss_pred CceEEEEEEC---CceeEEeeccCCCCCCceeecCCCCce-eeE-eeCCHHH----HHHHHHHHHHhCCccce-eeEEee
Q psy10158 250 GTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEI-RYP-VILSNAE----KLISRKVCLAFKQTVCG-FDLLRA 319 (1266)
Q Consensus 250 GtDVKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgKEi-Ryp-V~LT~eE----K~IA~kaakAFGq~VCG-fDLLRs 319 (1266)
+..|-|-++| ++++|--.|-.. +.|+ |.|-+ ..| ..|+++. +++|.++++++|..=+| ||++..
T Consensus 210 ~~~ieVqvl~D~~G~vv~l~erdcs-----vqrr-~qk~ie~aP~~~L~~~~~~~l~~~A~kl~~algy~G~gtVEflvd 283 (1146)
T PRK12999 210 PRHIEVQILGDKHGNVVHLYERDCS-----VQRR-HQKVVEIAPAPGLSEELRERICEAAVKLARAVGYVNAGTVEFLVD 283 (1146)
T ss_pred CeEEEEEEEEECCCCEEEEEccccc-----eeec-CccEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEE
Confidence 4667776665 355665455432 2221 23321 122 2567654 34899999999986544 999987
Q ss_pred -CCCeEEEeecC
Q psy10158 320 -NGKSFVCDVNG 330 (1266)
Q Consensus 320 -~ggsyVcDVNG 330 (1266)
+|++||+|||-
T Consensus 284 ~dg~~yfIEINp 295 (1146)
T PRK12999 284 ADGNFYFIEVNP 295 (1146)
T ss_pred CCCCEEEEEEEC
Confidence 45899999994
|
|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.8e-06 Score=110.13 Aligned_cols=194 Identities=13% Similarity=0.155 Sum_probs=120.2
Q ss_pred ccceeeccccCCCcHHHHHH-----HHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccc
Q psy10158 99 IVDCLISFHSKGFPLEKAIK-----YANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHEL 172 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~-----Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l 172 (1266)
..|++|+.++....|.-++. .++..+ +++-.+.....+.+||.+..+.|+++|||+|++..++...
T Consensus 82 ~~D~Iip~~gg~~~l~~~~~l~~~~~le~~Gv~~~g~~~~~i~~~~DK~~~k~~l~~~Gipvp~~~~v~s~~-------- 153 (1066)
T PRK05294 82 RPDAILPTMGGQTALNLAVELAESGVLEKYGVELIGAKLEAIDKAEDRELFKEAMKKIGLPVPRSGIAHSME-------- 153 (1066)
T ss_pred CcCEEEECCCCchhhhhhHHHHhhCHHHHCCCEEECCCHHHHHHhcCHHHHHHHHHHCCcCCCCeeeeCCHH--------
Confidence 35888887765555543332 345555 4556788999999999999999999999999999886411
Q ss_pred cccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCc--cc--ccCcceEEeeccCC
Q psy10158 173 VESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES--RV--RKSGSFIYEDFMPT 248 (1266)
Q Consensus 173 ~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s--~v--r~~gSyIYEEFI~t 248 (1266)
+..+.+ ..+..|+|+||..|.+ |.|+. +.+ |.. ++..-. .+ ...+.+|+||||+-
T Consensus 154 -e~~~~~----~~ig~PvVVKP~~g~g-----------g~Gv~-iv~---~~e-eL~~a~~~~~~~s~~~~vlvEe~I~G 212 (1066)
T PRK05294 154 -EALEVA----EEIGYPVIIRPSFTLG-----------GTGGG-IAY---NEE-ELEEIVERGLDLSPVTEVLIEESLLG 212 (1066)
T ss_pred -HHHHHH----HHcCCCeEEEcCCCCC-----------CCCeE-EEC---CHH-HHHHHHHHHHhhCCCCeEEEEEcccC
Confidence 111111 1234899999998762 55553 332 211 111000 11 12467999999962
Q ss_pred CCceEEEEEECC---cee--EEeeccCCCCCCceeecCCCCcee--eEe-eCCHHH----HHHHHHHHHHhCCc--ccee
Q psy10158 249 DGTDVKVYTVGP---DYA--HAEARKSPALDGKVERDSEGKEIR--YPV-ILSNAE----KLISRKVCLAFKQT--VCGF 314 (1266)
Q Consensus 249 ~GtDVKVYtVGp---~~v--hAe~RKSPvvDG~VRRN~hgKEiR--ypV-~LT~eE----K~IA~kaakAFGq~--VCGf 314 (1266)
. ..+-+-++.+ +++ ..+.+..|. ..|.+++. .|. .|++++ +++|.++++++|.. +|.|
T Consensus 213 ~-~Eisv~v~rd~~g~~~~~~~~e~~dp~-------gih~g~~~~~~Pa~~l~~~~~~~l~~~a~ki~~aLg~~~G~~~v 284 (1066)
T PRK05294 213 W-KEYEYEVMRDKNDNCIIVCSIENIDPM-------GVHTGDSITVAPAQTLTDKEYQMLRDASIAIIREIGVETGGCNV 284 (1066)
T ss_pred c-eEEEEEEEEcCCCCEEEEeeeeecccc-------ceecCCeEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCccCceEE
Confidence 1 3333333321 111 123333331 13444442 233 578755 47899999999997 9999
Q ss_pred eEEee--CCCeEEEeec
Q psy10158 315 DLLRA--NGKSFVCDVN 329 (1266)
Q Consensus 315 DLLRs--~ggsyVcDVN 329 (1266)
|+.-. +|+.||+|||
T Consensus 285 ef~~~~~~g~~~viEiN 301 (1066)
T PRK05294 285 QFALNPKDGRYIVIEMN 301 (1066)
T ss_pred EEEEECCCCcEEEEEee
Confidence 99876 3679999999
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.5e-06 Score=101.58 Aligned_cols=193 Identities=16% Similarity=0.210 Sum_probs=117.6
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
||++ .|-....+.. ++++++..++.+.++.....+.+||...-+.|+++|||+|++..+.... +....+
T Consensus 84 ~dvI-t~e~e~v~~~-~l~~le~~gi~v~ps~~al~i~~DK~~~K~~l~~~GIptp~~~~v~~~~---------el~~~~ 152 (577)
T PLN02948 84 CDVL-TVEIEHVDVD-TLEALEKQGVDVQPKSSTIRIIQDKYAQKVHFSKHGIPLPEFMEIDDLE---------SAEKAG 152 (577)
T ss_pred CCEE-EEecCCCCHH-HHHHHHhcCCccCCCHHHHHHhcCHHHHHHHHHHCCcCCCCeEEeCCHH---------HHHHHH
Confidence 5654 3434455544 4578887776677889999999999999999999999999999885310 111111
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cc-cccCcceEEeeccCCCCceEEEEE
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SR-VRKSGSFIYEDFMPTDGTDVKVYT 257 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~-vr~~gSyIYEEFI~t~GtDVKVYt 257 (1266)
..|..|+|+||.+|. +.|.|+. +.+ +.. ++..- .. ...+..+|.|+||+ ....+-|.+
T Consensus 153 ----~~ig~P~VvKP~~gg----------s~g~Gv~-~v~---~~~-eL~~a~~~~~~~~~~vlvEefI~-~~~EisV~v 212 (577)
T PLN02948 153 ----DLFGYPLMLKSRRLA----------YDGRGNA-VAK---TEE-DLSSAVAALGGFERGLYAEKWAP-FVKELAVMV 212 (577)
T ss_pred ----HhcCCcEEEEeCCCC----------CCCCCeE-EEC---CHH-HHHHHHHHhhCCCCcEEEEecCC-CCeEEEEEE
Confidence 123489999999763 0155653 222 211 11100 01 12245789999994 236677776
Q ss_pred ECC---ceeEEeeccCCCCCCceeecCCCCceeeEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEeeC-CCeEEEee
Q psy10158 258 VGP---DYAHAEARKSPALDGKVERDSEGKEIRYPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRAN-GKSFVCDV 328 (1266)
Q Consensus 258 VGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs~-ggsyVcDV 328 (1266)
++. ++.. -|+++- +.++-.......|..|++ +=+++|.++++++|.. ++.+|++... |..||+||
T Consensus 213 ~r~~~G~i~~-----~p~~E~-~~~~~~~~~~~~Pa~l~~~~~~~~~~~A~~~~~aLg~~Gv~~vEffv~~dG~v~v~EI 286 (577)
T PLN02948 213 ARSRDGSTRC-----YPVVET-IHKDNICHVVEAPANVPWKVAKLATDVAEKAVGSLEGAGVFGVELFLLKDGQILLNEV 286 (577)
T ss_pred EECCCCCEEE-----ecCccc-EEECCeeEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEcCCCcEEEEEE
Confidence 642 2221 343221 122211112235666776 3356788999999732 4578988874 55799999
Q ss_pred c
Q psy10158 329 N 329 (1266)
Q Consensus 329 N 329 (1266)
|
T Consensus 287 n 287 (577)
T PLN02948 287 A 287 (577)
T ss_pred e
Confidence 9
|
|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.7e-06 Score=108.93 Aligned_cols=195 Identities=13% Similarity=0.150 Sum_probs=124.3
Q ss_pred ccceeeccccCCCcHHHHH-----HHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccc
Q psy10158 99 IVDCLISFHSKGFPLEKAI-----KYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHEL 172 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi-----~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l 172 (1266)
.+|++|+-++...++.=|+ ..++..+ |++-++.....+..||...-++|.++|||+|++..+....
T Consensus 98 ~~D~Iip~~gg~~gl~la~~l~~~g~Le~~GI~~~G~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~v~s~e-------- 169 (1102)
T PLN02735 98 RPDALLPTMGGQTALNLAVALAESGILEKYGVELIGAKLDAIKKAEDRELFKQAMEKIGLKTPPSGIATTLD-------- 169 (1102)
T ss_pred CCCEEEECCCchhhHHHHHHHhhhCHHHHCCCEEECCCHHHHHHhcCHHHHHHHHHHCCCCCCCeeEeCCHH--------
Confidence 6899999877656664333 2345555 5777899999999999999999999999999998885310
Q ss_pred cccCCeE-EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC----cccccCcceEEeeccC
Q psy10158 173 VESEDHV-EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE----SRVRKSGSFIYEDFMP 247 (1266)
Q Consensus 173 ~e~~D~I-~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~----s~vr~~gSyIYEEFI~ 247 (1266)
+..+.+ .+++ .|+|+||..|. .|.|+. + +.|.. ++..- .....++.+|.||||.
T Consensus 170 -ea~~~~~~iG~----yPvVVKP~~~~-----------GG~Gv~-i---v~n~e-EL~~a~~~a~~~s~~~~VLVEe~I~ 228 (1102)
T PLN02735 170 -ECFEIAEDIGE----FPLIIRPAFTL-----------GGTGGG-I---AYNKE-EFETICKAGLAASITSQVLVEKSLL 228 (1102)
T ss_pred -HHHHHHHHhCC----CCEEEEeCCCC-----------CCCceE-E---ECCHH-HHHHHHHHHHhcCCCCeEEEEEecC
Confidence 111111 2222 79999999965 233442 2 22211 11100 0113467789999996
Q ss_pred CCCceEEEEEECC---ce--eEEeeccCCCCCCceeecCCCCceee--Ee-eCCHHHH----HHHHHHHHHhCC--ccce
Q psy10158 248 TDGTDVKVYTVGP---DY--AHAEARKSPALDGKVERDSEGKEIRY--PV-ILSNAEK----LISRKVCLAFKQ--TVCG 313 (1266)
Q Consensus 248 t~GtDVKVYtVGp---~~--vhAe~RKSPvvDG~VRRN~hgKEiRy--pV-~LT~eEK----~IA~kaakAFGq--~VCG 313 (1266)
- ..-+=|=++++ ++ +-.+++..| .| .|.|.... |. .|++++. ++|.+|++++|. .+|.
T Consensus 229 G-~kE~ev~Vl~D~~g~~i~v~~ie~~dp--~g-----vh~G~s~~vaPa~tL~~~~~q~l~~~A~ki~~aLgi~~G~~n 300 (1102)
T PLN02735 229 G-WKEYELEVMRDLADNVVIICSIENIDP--MG-----VHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSN 300 (1102)
T ss_pred C-CeEEEEEEEEcCCCCEEEEeeEEEEcC--Cc-----cccCCEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCcCceE
Confidence 2 24555655543 22 233444444 22 24444432 44 4787544 458999999997 5899
Q ss_pred eeEEee--CCCeEEEeecC
Q psy10158 314 FDLLRA--NGKSFVCDVNG 330 (1266)
Q Consensus 314 fDLLRs--~ggsyVcDVNG 330 (1266)
||+.-. +|..||+|||.
T Consensus 301 Vqf~l~~~~g~~~ViEVNP 319 (1102)
T PLN02735 301 VQFAVNPVDGEVMIIEMNP 319 (1102)
T ss_pred EEEEEECCCCcEEEEEecC
Confidence 999875 57899999993
|
|
| >COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3e-06 Score=93.27 Aligned_cols=152 Identities=19% Similarity=0.204 Sum_probs=115.5
Q ss_pred HHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEe
Q psy10158 114 EKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEK 193 (1266)
Q Consensus 114 ~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeK 193 (1266)
.++-+|++..++ ...+.+..-|||++|..|..+ +++|.|.... +. .+-+|+|
T Consensus 93 ri~E~~~~nLG~----S~~Ai~v~aDK~lty~aLr~a-V~~p~t~e~~-~~----------------------~~k~ViK 144 (307)
T COG1821 93 RIYEEYVENLGC----SPRAIRVAADKRLTYKALRDA-VKQPPTREWA-EE----------------------PKKYVIK 144 (307)
T ss_pred HHHHHHhHhhCC----CHHHHhHhhhHHHHHHHHhhh-ccCCCccccc-cC----------------------CceEEec
Confidence 456667765544 357788889999999999999 9999998642 11 1669999
Q ss_pred cccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCC--------CCceEEEEEECCceeEE
Q psy10158 194 PVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPT--------DGTDVKVYTVGPDYAHA 265 (1266)
Q Consensus 194 pv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t--------~GtDVKVYtVGp~~vhA 265 (1266)
|.+|. +|.|. +|-. + .| ++ .|-||||+- .|++|.+.+|..+++.-
T Consensus 145 p~dgC-----------gge~i--~~~~-~------~p------d~-~i~qEfIeG~~lSVSL~~GEkv~pLsvNrQfi~~ 197 (307)
T COG1821 145 PADGC-----------GGEGI--LFGR-D------FP------DI-EIAQEFIEGEHLSVSLSVGEKVLPLSVNRQFIIF 197 (307)
T ss_pred ccccC-----------Cccee--eccC-C------Cc------ch-hhHHHhcCCcceEEEEecCCccccceechhhhhh
Confidence 99997 45554 3321 0 12 22 789999983 57888888887775532
Q ss_pred eeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHhC-C-ccceeeEEeeCCCeEEEeecC
Q psy10158 266 EARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFK-Q-TVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 266 e~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAFG-q-~VCGfDLLRs~ggsyVcDVNG 330 (1266)
+..+.--.|+..++..+|..+-.++|+++.+.++ + .-.||||.-+ ++|||+|||-
T Consensus 198 ---------~~~~~~y~gg~~pi~he~k~~~~~~Ai~aVeci~Gl~GYVGVDlVls-D~pYvIEINp 254 (307)
T COG1821 198 ---------AGSELVYNGGRTPIDHELKREAFEEAIRAVECIPGLNGYVGVDLVLS-DEPYVIEINP 254 (307)
T ss_pred ---------ccceeeeccCcCCCCcHHHHHHHHHHHHHHHhhccccceeeEEEEec-CCcEEEEecC
Confidence 4456667789999999999999999999999887 3 4679999999 9999999993
|
|
| >COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.4e-05 Score=90.45 Aligned_cols=236 Identities=19% Similarity=0.212 Sum_probs=153.7
Q ss_pred HHHHHHHHhhcCcEEEEEecccccc-ccccccc-----ccceeeccccCCCc-H-HHHHHHHhhcC-CccccCccchhhh
Q psy10158 67 MKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWP-----IVDCLISFHSKGFP-L-EKAIKYANLRK-PFVINNLNMQYDI 137 (1266)
Q Consensus 67 Mr~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP-----~cD~LIsFfS~GfP-L-~KAi~Y~klrk-p~~lNdl~~Q~il 137 (1266)
.+++++-|..+++=-.-+...+..+ ...+.|+ .+|++++. ..|+. . .....|++..+ ||+...+..=++.
T Consensus 23 a~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvfp~-lhG~~gEDg~iqg~le~~giPyvg~gv~~Sa~~ 101 (317)
T COG1181 23 AKAVLRALKGFGYDVTPVDITEAGLWMLDKEVTKRVLQKADVVFPV-LHGPYGEDGTIQGLLELLGIPYVGKGVLASAGA 101 (317)
T ss_pred HHHHHHHHhhcCceeEEEeccccceEEeccccchhhcccCCEEEEe-CCCCCCCCchHHHHHHHhCCCEecCchhhhhhc
Confidence 7778877777554222222233333 2222222 45555544 23332 2 46778888887 9999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhh
Q psy10158 138 QDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 217 (1266)
Q Consensus 138 rDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~L 217 (1266)
-||-.+-++++..|||++.++.+.++.... +..+.+.. .+..|+++||...- +-.|.. -
T Consensus 102 mdk~~~K~~~~~~g~~~a~~~~~~~~~~~~-----~~~e~~~~----~l~~p~~Vkp~~~g-----------SSvg~~-~ 160 (317)
T COG1181 102 MDKIVTKRLFKAEGLPVAPYVALTRDEYSS-----VIVEEVEE----GLGFPLFVKPAREG-----------SSVGRS-P 160 (317)
T ss_pred ccHHHHHHHHHHCCCCccceeeeecccchh-----HHHHHhhc----ccCCCEEEEcCCcc-----------ceeeEE-E
Confidence 999999999999999999999998753200 01112222 24599999998752 122332 2
Q ss_pred hcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCC--CC-CC-ce----eecCCCCceeeE
Q psy10158 218 FRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSP--AL-DG-KV----ERDSEGKEIRYP 289 (1266)
Q Consensus 218 frKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSP--vv-DG-~V----RRN~hgKEiRyp 289 (1266)
...+|+-.+ ..+...+.+...+.|+|+. |+.|.|=+.|... +++.-++ +. +| .| ..|+++++..+.
T Consensus 161 v~~~~d~~~--~~e~a~~~d~~vl~e~~~~--~rei~v~vl~~~~--~~~~l~~~eI~~~~~~fydye~Ky~~~gg~~~~ 234 (317)
T COG1181 161 VNVEGDLQS--ALELAFKYDRDVLREQGIT--GREIEVGVLGNDY--EEQALPLGEIPPKGEEFYDYEAKYLSTGGAQYD 234 (317)
T ss_pred eeeccchHH--HHHHHHHhCCceeeccCCC--cceEEEEecCCcc--cceecCceEEecCCCeEEeeeccccCCCCceee
Confidence 222332222 1122446789999999999 9999999999865 2222221 01 32 33 267884544433
Q ss_pred e--eCCH----HHHHHHHHHHHHhC-CccceeeEEeeC--CCeEEEeecC
Q psy10158 290 V--ILSN----AEKLISRKVCLAFK-QTVCGFDLLRAN--GKSFVCDVNG 330 (1266)
Q Consensus 290 V--~LT~----eEK~IA~kaakAFG-q~VCGfDLLRs~--ggsyVcDVNG 330 (1266)
+ .||+ +=+++|.+|++|+| ..+||+|++-.. |+.|++|||-
T Consensus 235 ~pa~lt~~~~~~i~~lA~~a~~alg~~g~~rvDf~~~~~~g~~~l~EvNt 284 (317)
T COG1181 235 IPAGLTDEIHEEIKELALRAYKALGCLGLARVDFFVDDDEGEFVLLEVNT 284 (317)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEEEECCCCCEEEEEEeC
Confidence 3 3676 44789999999999 999999999987 8999999993
|
|
| >PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 | Back alignment and domain information |
|---|
Probab=98.23 E-value=4e-07 Score=96.25 Aligned_cols=158 Identities=22% Similarity=0.315 Sum_probs=98.2
Q ss_pred HHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCcc
Q psy10158 146 LLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRS 225 (1266)
Q Consensus 146 iL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkS 225 (1266)
+|+++|||||+++.+.+.... .+.+...-..+..|+|+||..+- ...|+. ++.|..
T Consensus 1 l~~~~gI~tp~~~~~~~~~~~---------~~~~~~~~~~l~~P~~VKP~~~G-----------sS~Gi~----~v~~~~ 56 (203)
T PF07478_consen 1 LLKSAGIPTPPYVVVKKNEDD---------SDSIEKILEDLGFPLFVKPASEG-----------SSIGIS----KVHNEE 56 (203)
T ss_dssp HHHHTT-BB-SEEEEETTSHH---------HHHHHHHHHHHSSSEEEEESSTS-----------TTTTEE----EESSHH
T ss_pred ChhhcCCCCCCEEEEeccccc---------chhHHHHHhhcCCCEEEEECCCC-----------ccEEEE----EcCCHH
Confidence 688999999999999864220 00010001135699999999874 244543 132222
Q ss_pred ccccCC-cccccCcceEEeeccCCCCceEEEEEEC---CceeEEeeccCCCCCCceee----c--CCCCceeeEeeCCHH
Q psy10158 226 SVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVG---PDYAHAEARKSPALDGKVER----D--SEGKEIRYPVILSNA 295 (1266)
Q Consensus 226 S~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVG---p~~vhAe~RKSPvvDG~VRR----N--~hgKEiRypV~LT~e 295 (1266)
..-..- ...+-+...|.|||| .|+++-|-++| ..+...++...+ ++.+.- . -...+...|..|+++
T Consensus 57 el~~ai~~~~~~~~~vlVEefI--~G~E~tv~vl~~~~~~~~~~~ei~~~--~~~~d~~~Ky~~~~~~~~~~~pa~l~~~ 132 (203)
T PF07478_consen 57 ELEEAIEKAFKYDDDVLVEEFI--SGREFTVGVLGNGEPRVLPPVEIVFP--SEFYDYEAKYQPADSETEYIIPADLSEE 132 (203)
T ss_dssp HHHHHHHHHTTTHSEEEEEE----SSEEEEEEEEESSSTEEEEEEEEEES--SSEEEHHHHHSGCCSCEEEESS-SS-HH
T ss_pred HHHHHHHHHhhhcceEEEEeee--cccceEEEEEecCCcccCceEEEEcC--CCceehhheeccCCCceEEEecCCCCHH
Confidence 211111 122457789999999 79999999999 666666666654 233321 1 133445556667664
Q ss_pred ----HHHHHHHHHHHhCC-ccceeeEEee-CCCeEEEeecCc
Q psy10158 296 ----EKLISRKVCLAFKQ-TVCGFDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 296 ----EK~IA~kaakAFGq-~VCGfDLLRs-~ggsyVcDVNGw 331 (1266)
=+++|.+|.+++|. .+|=||+.=. +|.+||+|||.-
T Consensus 133 ~~~~i~~~a~~a~~~lg~~~~~RiD~rv~~~g~~~~lEiNt~ 174 (203)
T PF07478_consen 133 LQEKIKEIAKKAFKALGCRGYARIDFRVDEDGKPYFLEINTI 174 (203)
T ss_dssp HHHHHHHHHHHHHHHTTTCSEEEEEEEEETTTEEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHcCCCceeEEEEeccCCceEEEeccCc
Confidence 35789999999997 7899998876 788999999965
|
3.2.4 from EC. D-Alanine is one of the central molecules of the cross-linking step of peptidoglycan assembly. There are three enzymes involved in the D-alanine branch of peptidoglycan biosynthesis: the pyridoxal phosphate-dependent D-alanine racemase (Alr), the ATP-dependent D-alanine: D-alanine ligase (Ddl), and the ATP-dependent D-alanine:D-alanine-adding enzyme (MurF) [].; GO: 0008716 D-alanine-D-alanine ligase activity; PDB: 3Q1K_D 3I12_C 1IOV_A 1IOW_A 2DLN_A 4EG0_B 3LWB_A 1EHI_B 2FB9_A 3V4Z_A .... |
| >PRK13789 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.9e-06 Score=96.80 Aligned_cols=171 Identities=18% Similarity=0.217 Sum_probs=98.9
Q ss_pred chhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCC
Q psy10158 133 MQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGG 212 (1266)
Q Consensus 133 ~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~Gg 212 (1266)
.-.+.+||..+-++|+++|||+|++..+... .+..+++. .+..|+|+||..+. .|.
T Consensus 102 aa~le~dK~~~K~~l~~~gIpt~~~~~~~~~---------~ea~~~~~----~~~~PvVVKp~~~~-----------~gk 157 (426)
T PRK13789 102 CAQVEGSKHFAKSLMKEAKIPTASYKTFTEY---------SSSLSYLE----SEMLPIVIKADGLA-----------AGK 157 (426)
T ss_pred HHHHHcCHHHHHHHHHHcCCCCCCeEeeCCH---------HHHHHHHH----hcCCCEEEEeCCCC-----------CCC
Confidence 3346689999999999999999998877531 11222232 13489999999776 477
Q ss_pred chhhhhcccCCccccccC---Ccccc-cCcceEEeeccCCCCceEEEEEE--CCceeE---EeeccCCCCCCceeecCCC
Q psy10158 213 GSQRLFRKIGSRSSVYSP---ESRVR-KSGSFIYEDFMPTDGTDVKVYTV--GPDYAH---AEARKSPALDGKVERDSEG 283 (1266)
Q Consensus 213 Gv~~LfrKignkSS~y~p---~s~vr-~~gSyIYEEFI~t~GtDVKVYtV--Gp~~vh---Ae~RKSPvvDG~VRRN~hg 283 (1266)
|+. +.+........+.- ..... .+..+|.||||. |.-+=|.++ |..+.. +...| ...||+-.=|+.|
T Consensus 158 GV~-vv~~~eel~~a~~~~~~~~~~g~~~~~vlIEEfl~--G~E~Sv~~~~dg~~~~~lp~~~d~k-~~~d~d~g~~tgg 233 (426)
T PRK13789 158 GVT-VATEKKMAKRALKEIFKDKKFGQSGNQVVIEEFME--GQEASIFAISDGDSYFLLPAAQDHK-RAFDGDQGPNTGG 233 (426)
T ss_pred cEE-EECCHHHHHHHHHHHHhhccccCCCCeEEEEECcC--CeEEEEEEEECCCEEEEccceEecc-cccCCCCCCCCCC
Confidence 774 43321100000000 00011 134799999997 444444443 333221 22112 2246766667766
Q ss_pred CceeeEee-CCHHH-----HHHHHHHHHHh---C---CccceeeEEeeCCC-eEEEeecCc
Q psy10158 284 KEIRYPVI-LSNAE-----KLISRKVCLAF---K---QTVCGFDLLRANGK-SFVCDVNGF 331 (1266)
Q Consensus 284 KEiRypV~-LT~eE-----K~IA~kaakAF---G---q~VCGfDLLRs~gg-syVcDVNGw 331 (1266)
=+.-.|.. ++++. ++|+.++.+++ | ..|..+|++-.+++ +||+|+|-=
T Consensus 234 mg~~~P~p~~~~~~~~~i~~~i~~~~~~~l~~~g~~~~Gvl~~e~~it~~g~~~vlE~n~R 294 (426)
T PRK13789 234 MGAYCPAPVITEAILQKVKERIFDPMFDDFRKKGHPYRGLLYAGLMISPEGEPKVVEFNCR 294 (426)
T ss_pred ceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEcCCCCEEEEEEecC
Confidence 66666765 46532 23555556555 5 35667788877555 999999963
|
|
| >PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments) | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.5e-06 Score=89.75 Aligned_cols=127 Identities=24% Similarity=0.401 Sum_probs=87.5
Q ss_pred cCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcce-EEeeccCCCCceEEEEEECCceeEE
Q psy10158 187 NKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSF-IYEDFMPTDGTDVKVYTVGPDYAHA 265 (1266)
Q Consensus 187 ~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSy-IYEEFI~t~GtDVKVYtVGp~~vhA 265 (1266)
.-|+|+|--.+- +|-|-. |+.|+...=+-.+.+....+| -.|.||.. --||||--+|++| -|
T Consensus 50 ~fPvVvKvG~~h-----------~G~GKv----kv~n~~~~qDi~sll~~~~~Y~T~EPfId~-kyDirvqkIG~~y-kA 112 (203)
T PF02750_consen 50 RFPVVVKVGHAH-----------AGMGKV----KVDNQQDFQDIASLLAITKDYATTEPFIDA-KYDIRVQKIGNNY-KA 112 (203)
T ss_dssp SSSEEEEESS-S-----------TTTTEE----EE-SHHHHHHHHHHHHHHTS-EEEEE---E-EEEEEEEEETTEE-EE
T ss_pred CCCEEEEEcccc-----------CceeEE----EEccHHHHHHHHHHHHhcCceEEeeccccc-eeEEEEEEEcCeE-EE
Confidence 479999987665 466643 455555333333444433344 56888865 4899999999997 89
Q ss_pred eeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh-CCccceeeEEee-CCCeEEEeecCcee
Q psy10158 266 EARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF-KQTVCGFDLLRA-NGKSFVCDVNGFSF 333 (1266)
Q Consensus 266 e~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF-Gq~VCGfDLLRs-~ggsyVcDVNGwSF 333 (1266)
+.|+| ..|--..|+ |-.+-..|.+|+..|+..-.+++.| |++|||+|.|-+ .|+=|++|||+=|+
T Consensus 113 ~~R~s--is~nWK~N~-gsa~lEqi~~~~ryk~Wvd~~s~lfGGlDI~~v~ai~~kdGke~Iievnds~m 179 (203)
T PF02750_consen 113 YMRTS--ISGNWKANT-GSAMLEQIAMTERYKLWVDECSELFGGLDICAVDAIHGKDGKEYIIEVNDSSM 179 (203)
T ss_dssp EEEEE--SSSTSSTTS-SSEEEEEE---HHHHHHHHHHGGGGG--SEEEEEEEEETTS-EEEEEEE-TT-
T ss_pred EEEcc--ccccccccc-cchheeecCCChHHHHHHHHHHHHcCCccEEEEEEEEcCCCCEEEEEecCCcc
Confidence 99999 367777775 5677788999999999999999999 999999999999 68999999998655
|
The family comprises 5 homologous proteins Ia, Ib, IIa, IIb and III. Synapsins I, II, and III are encoded by 3 different genes. The a and b isoforms of synapsin I and II are splice variants of the primary transcripts []. Synapsin I is mainly associated with regulation of neurotransmitter release from presynaptic neuron terminals []. Synapsin II, as well as being involved in neurotransmitter release, has a role in the synaptogenesis and synaptic plasticity responsible for long term potentiation []. Recent studies implicate synapsin III with a developmental role in neurite elongation and synapse formation that is distinct from the functions of synapsins I and II []. Structurally, synapsins are multidomain proteins, of which 3 domains are common to all the mammalian forms. The N-terminal `A' domain is ~30 residues long and contains a serine residue that serves as an acceptor site for protein kinase-mediated phosphorylation. This is followed by the `B' linker domain, which is ~80 residues long and is relatively poorly conserved. Domain `C' is the longest, spanning approximately 300 residues. This domain is highly conserved across all the synapsins (including those from Drosophila) and is possessed by all splice variants. The remaining six domains, D-I, are not shared by all the synapsins and differ both between the primary transcripts and the splice variants. This entry represent the ATP-grasp fold found in synapsins, which is responsible for Ca dependent ATP binding. ; PDB: 1PX2_A 1PK8_F 1AUV_B 1AUX_A 2P0A_A 1I7N_A 1I7L_A. |
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit | Back alignment and domain information |
|---|
Probab=98.13 E-value=9.8e-06 Score=103.52 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=119.3
Q ss_pred ccceeeccccCCCcHHHH-----HHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccc
Q psy10158 99 IVDCLISFHSKGFPLEKA-----IKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHEL 172 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KA-----i~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l 172 (1266)
.+|++|+.++-..++.-| ...++..+. ++-.+..+..+.+||.+..+.|.++|||+|++..+....
T Consensus 81 ~~DaIlp~~gg~~~l~la~~l~~~~~le~~Gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~s~~-------- 152 (1050)
T TIGR01369 81 RPDAILPTFGGQTALNLAVELEESGVLEKYGVEVLGTPVEAIKKAEDRELFREAMKEIGEPVPESEIAHSVE-------- 152 (1050)
T ss_pred CCCEEEECCCChhHHHHHhhHHHHhHHHHCCCEEECCCHHHHHHhCCHHHHHHHHHHCCCCCCCeeecCCHH--------
Confidence 468899887654454222 234566664 555889999999999999999999999999998885311
Q ss_pred cccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC--cccc--cCcceEEeeccCC
Q psy10158 173 VESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE--SRVR--KSGSFIYEDFMPT 248 (1266)
Q Consensus 173 ~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~--s~vr--~~gSyIYEEFI~t 248 (1266)
+..+.+ ..+..|+|+||..|. .|.|+. +.+ |.. ++..- .... ..+.+|.||||+-
T Consensus 153 -e~~~~~----~~igyPvIVKP~~g~-----------gg~Gv~-iv~---~~e-eL~~~~~~~~~~s~~~~vlVEe~I~G 211 (1050)
T TIGR01369 153 -EALAAA----KEIGYPVIVRPAFTL-----------GGTGGG-IAY---NRE-ELKEIAERALSASPINQVLVEKSLAG 211 (1050)
T ss_pred -HHHHHH----HHhCCCeEEECCCCC-----------CCCCeE-EEC---CHH-HHHHHHHHHHhcCCCCcEEEEEcccC
Confidence 111111 123489999999886 255553 222 222 11100 0111 2257999999973
Q ss_pred CCceEEEEEECC---cee--EEeeccCCCCCCceeecCCCCcee--eEe-eCCHHHH----HHHHHHHHHhCCc-cceee
Q psy10158 249 DGTDVKVYTVGP---DYA--HAEARKSPALDGKVERDSEGKEIR--YPV-ILSNAEK----LISRKVCLAFKQT-VCGFD 315 (1266)
Q Consensus 249 ~GtDVKVYtVGp---~~v--hAe~RKSPvvDG~VRRN~hgKEiR--ypV-~LT~eEK----~IA~kaakAFGq~-VCGfD 315 (1266)
. ..+=+-+++. +.+ ..+.+.-| .| .|.+++. .|. .|++++. ++|.++++++|.. +|.||
T Consensus 212 ~-~Eiev~v~rd~~g~~~~~~~~e~~~p--~g-----vh~g~~i~v~Pa~tl~~~~~~~l~~~a~~i~~~Lg~~G~~~Ve 283 (1050)
T TIGR01369 212 W-KEIEYEVMRDSNDNCITVCNMENFDP--MG-----VHTGDSIVVAPSQTLTDKEYQMLRDASIKIIRELGIEGGCNVQ 283 (1050)
T ss_pred c-eEEEEEEEEeCCCCEEEEeeceeccC--cc-----eecCceEEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEE
Confidence 1 3333333321 222 23344333 12 2333332 343 3787554 5888999999985 78899
Q ss_pred EEee--CCCeEEEeecC
Q psy10158 316 LLRA--NGKSFVCDVNG 330 (1266)
Q Consensus 316 LLRs--~ggsyVcDVNG 330 (1266)
+.-. +|+.||+|||.
T Consensus 284 f~l~~~~g~~~viEiNP 300 (1050)
T TIGR01369 284 FALNPDSGRYYVIEVNP 300 (1050)
T ss_pred EEEECCCCcEEEEEeec
Confidence 8886 46899999994
|
In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes. |
| >PRK06524 biotin carboxylase-like protein; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.3e-06 Score=97.29 Aligned_cols=185 Identities=11% Similarity=0.090 Sum_probs=109.3
Q ss_pred HHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEec
Q psy10158 116 AIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKP 194 (1266)
Q Consensus 116 Ai~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKp 194 (1266)
..+.++..+ ||+.-+..+..+..||..+.++++++|||+|++..+..+.. .++. +.+. ...|..|+|+||
T Consensus 118 iQ~lLE~lGIpy~gP~a~asai~mDK~~tK~l~~~aGIPtpp~~~~~~~~~----eel~---~~~~--~~~IGyPvVVKP 188 (493)
T PRK06524 118 TEALARQAGLEVMHPPAELRHRLDSKIVTTRLANEAGVPSVPHVLGRVDSY----DELS---ALAH--GAGLGDDLVVQT 188 (493)
T ss_pred HHHHHHHCCCeEECcCHHHHHHhCCHHHHHHHHHHcCCCCCCcccccCCCH----HHHH---HHHH--hccCCCcEEEEE
Confidence 334444444 67789999999999999999999999999999988632211 0010 1111 112458999999
Q ss_pred ccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCce--EEEEEECC-ceeEEeeccC
Q psy10158 195 VSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTD--VKVYTVGP-DYAHAEARKS 270 (1266)
Q Consensus 195 v~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtD--VKVYtVGp-~~vhAe~RKS 270 (1266)
..|. .|.|+. ..+ +.. ++..- ..+-.+..+|+|+||. |.- |=|++-+. .+++...+.
T Consensus 189 ~~GG-----------SS~GV~-~Vk---n~e-ELe~a~~~~~~~~~viVEe~I~--GrEitVev~vd~dG~Vv~~~~~e- 249 (493)
T PRK06524 189 PYGD-----------SGSTTF-FVR---GQR-DWDKYAGGIVGQPEIKVMKRIR--NVEVCIEACVTRHGTVIGPAMTS- 249 (493)
T ss_pred CCCC-----------CCcCEE-EeC---CHH-HHHHHHHHhcCCCCEEEEeccC--cEEEEEEEEEeCCCCEEeccccc-
Confidence 9886 366663 222 111 11100 0111234579999995 533 33344332 233221111
Q ss_pred CCCCCceeecCCCCc---eeeEeeCCH----HHHHHHHHHHHHhC----CccceeeEEee--CCCeEEEeec
Q psy10158 271 PALDGKVERDSEGKE---IRYPVILSN----AEKLISRKVCLAFK----QTVCGFDLLRA--NGKSFVCDVN 329 (1266)
Q Consensus 271 PvvDG~VRRN~hgKE---iRypV~LT~----eEK~IA~kaakAFG----q~VCGfDLLRs--~ggsyVcDVN 329 (1266)
++-..++. .-.++. ...|..|++ +=+++|.+++++++ ..+++||++.. +|+.|++|||
T Consensus 250 ~vg~~Ei~-~yr~G~~~~~i~PA~L~~ei~eeIqeiA~ka~~aL~~lG~~Gv~rVDFfvd~ddgevYfnEIN 320 (493)
T PRK06524 250 LVGYPELT-PYRGGWCGNDIWPGALPPAQTRKAREMVRKLGDVLSREGYRGYFEVDLLHDLDADELYLGEVN 320 (493)
T ss_pred cccceEEE-EccCCeEEEEEccCCCCHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEEEEECCCCeEEEEEEe
Confidence 11000121 011222 244777888 56678899999983 68889999987 5789999999
|
|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.9e-05 Score=101.06 Aligned_cols=194 Identities=15% Similarity=0.196 Sum_probs=116.7
Q ss_pred ccceeeccccCCCcHHHHHH-----HHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccc
Q psy10158 99 IVDCLISFHSKGFPLEKAIK-----YANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHEL 172 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~-----Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l 172 (1266)
..|++|+.++....+.-|++ .++..+. ++-.+.....+.+||.+..++|.++|||+|++..+....
T Consensus 82 ~~D~Iip~~gg~~~l~~a~~l~~~g~Le~~gv~l~g~~~~~i~~~~DK~~~k~~l~~~GIpvp~~~~v~s~e-------- 153 (1068)
T PRK12815 82 KPDALLATLGGQTALNLAVKLHEDGILEQYGVELLGTNIEAIQKGEDRERFRALMKELGEPVPESEIVTSVE-------- 153 (1068)
T ss_pred CcCEEEECCCCchHHHHHHHHHhcCHHHHCCCEEECCCHHHHHHhcCHHHHHHHHHHcCcCCCCceeeCCHH--------
Confidence 46888887764444543331 4455554 445788899999999999999999999999999886411
Q ss_pred cccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC--ccc--ccCcceEEeeccCC
Q psy10158 173 VESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE--SRV--RKSGSFIYEDFMPT 248 (1266)
Q Consensus 173 ~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~--s~v--r~~gSyIYEEFI~t 248 (1266)
+..+.+. .+..|+|+||..|.+ |.|+. +.+ |.. ++..- ..+ ...+.+|.||||+-
T Consensus 154 -e~~~~~~----~igyPvVVKP~~g~g-----------G~Gv~-iv~---~~e-EL~~a~~~~~~~s~~~~vLVEe~I~G 212 (1068)
T PRK12815 154 -EALAFAE----KIGFPIIVRPAYTLG-----------GTGGG-IAE---NLE-ELEQLFKQGLQASPIHQCLLEESIAG 212 (1068)
T ss_pred -HHHHHHH----HcCCCEEEEECcCCC-----------CCceE-EEC---CHH-HHHHHHHHHHhcCCCCeEEEEEccCC
Confidence 1111121 234899999998752 44542 222 222 11100 001 12357999999962
Q ss_pred CCceEEEEEECC---cee--EEeeccCCCCCCceeecCCCCcee--eEe-eCCHHH----HHHHHHHHHHhCC-ccceee
Q psy10158 249 DGTDVKVYTVGP---DYA--HAEARKSPALDGKVERDSEGKEIR--YPV-ILSNAE----KLISRKVCLAFKQ-TVCGFD 315 (1266)
Q Consensus 249 ~GtDVKVYtVGp---~~v--hAe~RKSPvvDG~VRRN~hgKEiR--ypV-~LT~eE----K~IA~kaakAFGq-~VCGfD 315 (1266)
. ..+=|-++.+ +++ .++.+..| .| .|.|+.. .|. .|++++ +++|.++++++|. .+|.||
T Consensus 213 ~-~E~sv~v~rD~~g~~~~~~~~e~~~p--~g-----i~tG~s~~v~Pa~~l~~~~~~~l~~~a~ki~~~Lg~~G~~~ve 284 (1068)
T PRK12815 213 W-KEIEYEVMRDRNGNCITVCNMENIDP--VG-----IHTGDSIVVAPSQTLTDDEYQMLRSASLKIISALGVVGGCNIQ 284 (1068)
T ss_pred C-eEEEEEEEEcCCCCEEEEEeceeccc--cc-----ccCCceEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEE
Confidence 1 3344444432 222 22233222 22 2223222 233 477764 4688999999998 478899
Q ss_pred EEee--CCCeEEEeec
Q psy10158 316 LLRA--NGKSFVCDVN 329 (1266)
Q Consensus 316 LLRs--~ggsyVcDVN 329 (1266)
+.-. .|++||+|||
T Consensus 285 f~l~~~~g~~~ViEIN 300 (1068)
T PRK12815 285 FALDPKSKQYYLIEVN 300 (1068)
T ss_pred EEEECCCCcEEEEEEe
Confidence 8765 3679999999
|
|
| >KOG3720|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00024 Score=83.01 Aligned_cols=64 Identities=33% Similarity=0.446 Sum_probs=52.2
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccc-cccceEEecCchhHHHHHHHHHHHhhcccCC
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAAFAKGLLALEGE 593 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~-rhDlKIYSSdEgRVq~TAaaFAkglL~lEge 593 (1266)
|+||..|..|+-+||+.+|+-|=.- .++| -..| +.++.|+|||=-|+.+||++..+||+.-++.
T Consensus 69 GqLT~~G~~Q~~~LG~~LR~rYvr~----~~fL--~~~y~~~ev~iRStd~nRtl~SAqs~laGlfp~~~~ 133 (411)
T KOG3720|consen 69 GQLTDRGMEQMFELGRFLRKRYVRY----GNFL--SPKYNPKEVYIRSTDVNRTLMSAQSVLAGLFPPEGR 133 (411)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhc----cccC--CcccCcceEEEecCCccHHHHHHHHHHHhhCCCCCC
Confidence 7999999999999999999744432 1243 2233 5699999999999999999999999997644
|
|
| >TIGR02712 urea_carbox urea carboxylase | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.5e-05 Score=103.12 Aligned_cols=199 Identities=14% Similarity=0.122 Sum_probs=114.5
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCC-eEEeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPR-YAVLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~-tv~~~rd~~~~~~~~l~e 174 (1266)
.+|++|+-+ ||-- ....+.++..+ +|+-++.+...+++||....++|+++|||+|. +..+... .+
T Consensus 73 ~idaIiPG~--gflsE~~~~a~~~e~~Gi~~iGps~ea~~~~~DK~~ar~ll~~~GVPt~p~~~lv~s~---------de 141 (1201)
T TIGR02712 73 GAQAIHPGY--GFLSENAAFAEACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLSSL---------DE 141 (1201)
T ss_pred CCCEEEeCC--cccccCHHHHHHHHHcCCcEECCCHHHHHHhcCHHHHHHHHHHCCCCCCCceeecCCH---------HH
Confidence 367787765 3321 23455666665 56778889999999999999999999999855 5444320 01
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc----ccCcceEEeeccCCCC
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV----RKSGSFIYEDFMPTDG 250 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v----r~~gSyIYEEFI~t~G 250 (1266)
..+.+. .+..|+|+||..|. .|.|++ +.+....-...|..-... -.+..+|.||||.- |
T Consensus 142 a~~~a~----~igyPvVVKP~~gg-----------GG~GV~-iv~~~eEL~~a~~~~~~~~~~~f~~~~vlVEefI~g-~ 204 (1201)
T TIGR02712 142 ALEAAK----EIGYPVMLKSTAGG-----------GGIGMQ-KCDSAAELAEAFETVKRLGESFFGDAGVFLERFVEN-A 204 (1201)
T ss_pred HHHHHH----hcCCeEEEEECCCC-----------CCCCEE-EECCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCC-C
Confidence 111111 23489999999986 355653 332211000000000000 01345899999973 5
Q ss_pred ceEEEEEECC---ceeEEeeccCCCCCCcee-ecCCCCceeeEeeCCHH----HHHHHHHHHHHhCCc-cceeeEEeeC-
Q psy10158 251 TDVKVYTVGP---DYAHAEARKSPALDGKVE-RDSEGKEIRYPVILSNA----EKLISRKVCLAFKQT-VCGFDLLRAN- 320 (1266)
Q Consensus 251 tDVKVYtVGp---~~vhAe~RKSPvvDG~VR-RN~hgKEiRypV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs~- 320 (1266)
.-|-|.++|+ .+++--.|-. .+. +|..--+..-...|+++ =.++|.++++++|.. ++.||++-..
T Consensus 205 ~eveV~v~~Dg~g~vv~lg~rd~-----s~qr~~~k~vee~Pap~l~~~~~~~l~~~a~~l~~aLgy~G~~~VEfild~~ 279 (1201)
T TIGR02712 205 RHVEVQIFGDGKGKVVALGERDC-----SLQRRNQKVVEETPAPNLPPETRQALLAAAERLGEAVNYRSAGTVEFIYDEA 279 (1201)
T ss_pred EEEEEEEEECCCCeEEEeeEEEe-----eeEecCccEEEEcCCCCCCHHHHHHHHHHHHHHHHhcCccceEEEEEEEECC
Confidence 6677766653 3444333321 121 22111111111134543 345788889998865 6779999863
Q ss_pred -CCeEEEeecC
Q psy10158 321 -GKSFVCDVNG 330 (1266)
Q Consensus 321 -ggsyVcDVNG 330 (1266)
|++||+|||.
T Consensus 280 ~g~~y~lEVNp 290 (1201)
T TIGR02712 280 RDEFYFLEVNT 290 (1201)
T ss_pred CCCEEEEEEEC
Confidence 7899999995
|
Members of this family are ATP-dependent urea carboxylase, including characterized members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae. The allophanate hydrolase domain of the yeast enzyme is not included in this model and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from Oleomonas sagaranensis was shown to be highly active on acetamide and formamide as well as urea. |
| >PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.2e-05 Score=86.20 Aligned_cols=176 Identities=22% Similarity=0.290 Sum_probs=114.6
Q ss_pred cCCccccCccchhhhhHHHHHHHHHHhcC-CC--CCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccC
Q psy10158 123 RKPFVINNLNMQYDIQDRRKVYALLEKEG-IE--IPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAED 199 (1266)
Q Consensus 123 rkp~~lNdl~~Q~ilrDRr~vlqiL~~~g-Ip--~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~Ged 199 (1266)
++....|. .+.|||.+|+.|.+.. +. +|.|....... ....++.- .+-+.+||..|.
T Consensus 7 ~~i~~~n~-----~~~~Kw~v~~~L~~~~~l~~~LP~T~~~~~~~---------~l~~~L~~-----y~~vylKP~~Gs- 66 (262)
T PF14398_consen 7 KGIPFFNP-----GFFDKWEVYKALSRDPELRPYLPETELLTSFE---------DLREMLNK-----YKSVYLKPDNGS- 66 (262)
T ss_pred CCCEEeCC-----CCCCHHHHHHHHHcCCcchhhCCCceEcCCHH---------HHHHHHHH-----CCEEEEEeCCCC-
Confidence 34455554 2479999999999863 55 88887775311 01122211 245889999998
Q ss_pred cceEEEeccCCCCchhhhhcccCCccc------------cccCCc-------ccccCcceEEeeccC--C-CC--ceEEE
Q psy10158 200 HNIYIYYPTSAGGGSQRLFRKIGSRSS------------VYSPES-------RVRKSGSFIYEDFMP--T-DG--TDVKV 255 (1266)
Q Consensus 200 HNI~IYyp~s~GgGv~~LfrKignkSS------------~y~p~s-------~vr~~gSyIYEEFI~--t-~G--tDVKV 255 (1266)
.|.|+.++-+. ++.-. .|.-.. ..-....||.|+.|+ + +| -|+||
T Consensus 67 ----------~G~gI~ri~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~yIiQq~I~l~~~~gr~fD~Rv 135 (262)
T PF14398_consen 67 ----------KGKGIIRIEKK-GGGYRIQYRNKKKNVRRTFSSLEELEQFLKELLGKRRYIIQQGIPLATYDGRPFDFRV 135 (262)
T ss_pred ----------CCccEEEEEEe-CCEEEEEEccCCceeEEEeCCHHHHHHHHHHhcCCCcEEEeCCccccccCCCeEEEEE
Confidence 56676544332 22111 111000 112467999999998 3 67 99999
Q ss_pred EEEC--C---ceeEEeeccCCCCCCceeecCCCCceeeEee--CC---------HHHHH----HHHHHHHHhCC--ccce
Q psy10158 256 YTVG--P---DYAHAEARKSPALDGKVERDSEGKEIRYPVI--LS---------NAEKL----ISRKVCLAFKQ--TVCG 313 (1266)
Q Consensus 256 YtVG--p---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~--LT---------~eEK~----IA~kaakAFGq--~VCG 313 (1266)
++-= . .+....+|.++ .|.+-.|.++||...++. |. .+=++ +|..+.+.||. .-.|
T Consensus 136 lvqK~~~G~W~vtg~~~Rva~--~~~ivTN~~~GG~~~~~~~~l~~~~~~~~~~~~l~~~a~~ia~~le~~~~~~~gElG 213 (262)
T PF14398_consen 136 LVQKNGSGKWQVTGIVARVAK--PGSIVTNLSQGGTALPFEEVLRQSEEAEKIREELEDLALEIAQALEKHFGGHLGELG 213 (262)
T ss_pred EEEECCCCCEEEEEEEEEEcC--CCCceeccCCCceecCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCceeEEE
Confidence 9982 2 56788999997 888999999998866551 11 11123 44455556674 6789
Q ss_pred eeEEee-CCCeEEEeecCc
Q psy10158 314 FDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 314 fDLLRs-~ggsyVcDVNGw 331 (1266)
+||-=. +|+..++|||+=
T Consensus 214 iDl~iD~~g~iWliEvN~k 232 (262)
T PF14398_consen 214 IDLGIDKNGKIWLIEVNSK 232 (262)
T ss_pred EEEEEcCCCCEEEEEEeCC
Confidence 999776 899999999984
|
|
| >PRK05784 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00011 Score=87.32 Aligned_cols=199 Identities=14% Similarity=0.058 Sum_probs=112.9
Q ss_pred cceeeccccCCCcHH-HHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCC-CeEEeccCCCCCccccccccC
Q psy10158 100 VDCLISFHSKGFPLE-KAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIP-RYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~-KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P-~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.|++|+...+ |+. .+...++..+. +.-++..+-.+.+||..+-++|+++|||+| .+..+.. ..+..
T Consensus 70 id~Vi~g~E~--~l~~glad~l~~~Gi~v~Gps~~aa~le~dK~~~K~~l~~~gIpt~~~~~~~~~---------~~ea~ 138 (486)
T PRK05784 70 PDLVVIGPEE--PLFAGVADVLREEGFPVFGASSKCARIEKSKVWARELMWKYSIPGRLRYKVFYD---------VEEAA 138 (486)
T ss_pred CCEEEECCch--HHHHHHHHHHHhCCCCEECCcHHHHHHhcCHHHHHHHHHHcCcCCCccceEeCC---------HHHHH
Confidence 4566654332 442 33334444443 344777777788999999999999999997 5655532 11122
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccc----cc-----c--CC-----c-ccccCcc
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSS----VY-----S--PE-----S-RVRKSGS 239 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS----~y-----~--p~-----s-~vr~~gS 239 (1266)
+++.. + .|+|+||..+. .|.|+. +.. +... ++ . .+ . .-..+..
T Consensus 139 ~~~~~----~-~PvVVKP~~~a-----------ggkGV~-iv~---~~~e~~~~~~~ea~~~a~~~~~~~~~~~g~~~~~ 198 (486)
T PRK05784 139 KFIEY----G-GSVAIKPARQA-----------GGKGVK-VIA---DLQAYLSQEKREALTKSVNDIKEGSAYYKDVEPK 198 (486)
T ss_pred HHHhh----c-CCEEEeeCCCC-----------CCCCEE-EEC---ChhHhcchhHHHHHHHHHHHHHHhHhhccCCCCe
Confidence 22311 2 49999999887 577874 433 2220 00 0 00 0 1123567
Q ss_pred eEEeeccCCCCceEEEEEECCceeE-EeeccC-CCCCCceeecCCCCceeeE----ee-CCHHH----HHHHHHHHHHhC
Q psy10158 240 FIYEDFMPTDGTDVKVYTVGPDYAH-AEARKS-PALDGKVERDSEGKEIRYP----VI-LSNAE----KLISRKVCLAFK 308 (1266)
Q Consensus 240 yIYEEFI~t~GtDVKVYtVGp~~vh-Ae~RKS-PvvDG~VRRN~hgKEiRyp----V~-LT~eE----K~IA~kaakAFG 308 (1266)
+|.||||.-.--.|=+++-|..+.. ...+.- .+.||..--|+.|=+.=.| +. +++++ .+++.++.++++
T Consensus 199 VlIEEfL~G~E~SV~al~dG~~~~~l~~~qd~k~~~~~d~gpntGgmg~~~p~~~~~P~~~~~~~~~~~~~v~~~l~al~ 278 (486)
T PRK05784 199 ILVEEKVDGVEYTLQVLTDGETVIPLPLAQDYPHAYEDGIGPETGGMGSISGPGELLPFINEEEYEEAVEIVKRTIDAIY 278 (486)
T ss_pred EEEEEccCCeEEEEEEEECCCeEEEeeeeEeecceecCCCCCCCCCCcccCCccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999822234445544544331 111111 1236666667666554333 32 34433 245777776776
Q ss_pred Cc-------cceeeEEee-CCCeEEEeec
Q psy10158 309 QT-------VCGFDLLRA-NGKSFVCDVN 329 (1266)
Q Consensus 309 q~-------VCGfDLLRs-~ggsyVcDVN 329 (1266)
.. ++-++|.-+ ++||+|+|+|
T Consensus 279 ~~~g~~~~G~l~~elmlt~~~GP~vIE~n 307 (486)
T PRK05784 279 KETGERYVGVISGQMMLTELWGPTVIEYY 307 (486)
T ss_pred HhcCCCcEEEEEEEEEEecCCCcEEEEEe
Confidence 43 344578888 8999999999
|
|
| >PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0034 Score=73.80 Aligned_cols=65 Identities=25% Similarity=0.299 Sum_probs=52.1
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhccc-ccccceEEecCchhHHHHHHHHHHHhhcccC
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHST-FRHDLKIYASDEGRVQMTAAAFAKGLLALEG 592 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst-~rhDlKIYSSdEgRVq~TAaaFAkglL~lEg 592 (1266)
.|+||.-|+.|-..+|+.||.+| .. .|||--+-- --.++.+||++-.|.+.||++|+.||.--.+
T Consensus 68 ~G~LT~~G~~~~~~~G~~~r~~~-~~----~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl~P~c~ 133 (413)
T PRK10173 68 GGQLTTKGGVLEVYMGHYMREWL-AQ----QGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCD 133 (413)
T ss_pred cccccHHHHHHHHHHHHHHHHHH-HH----cCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhcCCCCC
Confidence 49999999999999999999877 32 477632110 1248999999999999999999999997544
|
|
| >PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.001 Score=76.84 Aligned_cols=164 Identities=19% Similarity=0.217 Sum_probs=95.5
Q ss_pred CccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccC
Q psy10158 130 NLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTS 209 (1266)
Q Consensus 130 dl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s 209 (1266)
+-.+....+||.+..+.|+++|||+|+++ .. .++ +..|+|+||..|.+
T Consensus 114 n~~~l~~e~dK~~~k~~L~~aGIp~p~~~--~~------------~~~--------i~~PvIVKp~~g~g---------- 161 (358)
T PRK13278 114 NREILRWEADRDKERKLLEEAGIRIPRKY--ES------------PED--------IDRPVIVKLPGAKG---------- 161 (358)
T ss_pred CHHHHHHhcCHHHHHHHHHHcCCCCCCEe--CC------------HHH--------cCCCEEEEeCCCCC----------
Confidence 33455667889999999999999999962 11 011 23799999988762
Q ss_pred CCCchhhhhcccCCccccccCCc-------ccccCcceEEeeccCCCCceEEEEEE---CCceeEEeeccCCC-CCCcee
Q psy10158 210 AGGGSQRLFRKIGSRSSVYSPES-------RVRKSGSFIYEDFMPTDGTDVKVYTV---GPDYAHAEARKSPA-LDGKVE 278 (1266)
Q Consensus 210 ~GgGv~~LfrKignkSS~y~p~s-------~vr~~gSyIYEEFI~t~GtDVKVYtV---Gp~~vhAe~RKSPv-vDG~VR 278 (1266)
|.|+. +.+ +.+ ++.... .+.....+|.||||.-.--.+=+|+. |.-...++.|+=-. .||.||
T Consensus 162 -gkGv~-i~~---s~~-El~~~~~~l~~~~~~~~~~~~iIEEfI~G~e~sv~~f~s~~~~~~e~l~id~r~~~~~d~~~r 235 (358)
T PRK13278 162 -GRGYF-IAK---SPE-EFKEKIDKLIERGLITEVEEAIIQEYVVGVPYYFHYFYSPIKNRLELLGIDRRYESNIDGLVR 235 (358)
T ss_pred -CCCeE-EeC---CHH-HHHHHHHHHHhccccCCCCeEEEEecCCCcEEEEEEEEeccCCeEEEEeeceeeeecccceee
Confidence 44442 222 111 111000 12236789999999732234446654 66566676665544 577776
Q ss_pred e--c---CCCCceeeEee------CC----HHHHHHHHHHHHH----h-CCccc--eeeEEee-CCCeEEEeecCc
Q psy10158 279 R--D---SEGKEIRYPVI------LS----NAEKLISRKVCLA----F-KQTVC--GFDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 279 R--N---~hgKEiRypV~------LT----~eEK~IA~kaakA----F-Gq~VC--GfDLLRs-~ggsyVcDVNGw 331 (1266)
- . ..+.+-.|++. +. ++=.++|.+++++ + +..+| .+|.... ++..+|+|||+=
T Consensus 236 ~p~~~~~~~~~~p~~v~~Gn~P~~~resll~~v~~~~~~~v~a~~~~~~~~~~Gp~~ie~~~~~d~~~~V~Eis~R 311 (358)
T PRK13278 236 IPAKDQLELGIDPTYVVVGNIPVVLRESLLPQVFEYGERFVETSKELVPPGMIGPFCLESVVTDNLEIVVFEISAR 311 (358)
T ss_pred ccchhhhhcccCCceeEecceeccchHhHHHHHHHHHHHHHHHHHHhcCccccCCceEEEEEcCCCCEEEEEEeCc
Confidence 2 1 12223333332 22 3344566666666 5 55444 4566666 556799999874
|
|
| >COG0439 AccC Biotin carboxylase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00051 Score=81.34 Aligned_cols=197 Identities=15% Similarity=0.143 Sum_probs=129.3
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcCCccccCcc--chhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRKPFVINNLN--MQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrkp~~lNdl~--~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e 174 (1266)
.+|++++.|+ |-- .+..+-|...+ +++.... ....+.||...=++++++|||+|.....- .. ...+
T Consensus 74 gadai~pGyg--flsen~~fae~~~~~g-l~fiGP~~~~i~~mgdK~~ar~~~~~aGVP~vpgs~~~--~~-----~~ee 143 (449)
T COG0439 74 GADAIHPGYG--FLSENAAFAEACAEAG-LTFIGPSAEAIRRMGDKITARRLMAKAGVPVVPGSDGA--VA-----DNEE 143 (449)
T ss_pred CCceEcccch--hhhCCHHHHHHHHHcC-CeeeCcCHHHHHHhhhHHHHHHHHHHcCCCcCCCCCCC--cC-----CHHH
Confidence 5889999886 544 56667777767 6666554 44578899999999999999999987321 00 0112
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc-------ccCcceEEeeccC
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV-------RKSGSFIYEDFMP 247 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v-------r~~gSyIYEEFI~ 247 (1266)
.......-| .|+|+||..|- -|.|+ ++.+.. +.....-... --++.++.|+||.
T Consensus 144 ~~~~a~~iG----yPVivKa~~Gg-----------Gg~G~-r~v~~~---~el~~a~~~~~~ea~~~fg~~~v~iEk~i~ 204 (449)
T COG0439 144 ALAIAEEIG----YPVIVKAAAGG-----------GGRGM-RVVRNE---EELEAAFEAARGEAEAAFGNPRVYLEKFIE 204 (449)
T ss_pred HHHHHHHcC----CCEEEEECCCC-----------CcccE-EEECCH---HHHHHHHHHHHHHHHHhcCCCcEEeeeecc
Confidence 222233333 99999999997 36677 476643 2222211111 1477799999998
Q ss_pred CCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHHH----HHHHHHHHhCCccce-eeEEee
Q psy10158 248 TDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKL----ISRKVCLAFKQTVCG-FDLLRA 319 (1266)
Q Consensus 248 t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~----IA~kaakAFGq~VCG-fDLLRs 319 (1266)
. -+-|=+-+.|+ .++|.-.|-.. .=||+-.=.|..-...|+++-++ .|.+++++.|-.-|| |++|-.
T Consensus 205 ~-~rhievqv~gD~~g~~i~l~eRdcs----iqrr~qkvieeapsp~~~~e~r~~i~~~a~~a~~~~gY~gagtvEfl~~ 279 (449)
T COG0439 205 G-PRHIEVQVLGDGHGNVIHLGERDCS----IQRRHQKVIEEAPSPLLTEELREKIGEAAVRAAKLIGYRGAGTVEFLYD 279 (449)
T ss_pred C-CceEEEEEEEcCcccEEEEEeccCC----CcCCccceeeecCCCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEe
Confidence 4 23444555555 45888888742 13455544566555567765554 467888888877777 788888
Q ss_pred -CCCeEEEeec
Q psy10158 320 -NGKSFVCDVN 329 (1266)
Q Consensus 320 -~ggsyVcDVN 329 (1266)
+|++|++|+|
T Consensus 280 ~~~~~yfiEmN 290 (449)
T COG0439 280 SNGEFYFIEMN 290 (449)
T ss_pred CCCCEEEEEEe
Confidence 5999999999
|
|
| >cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00035 Score=67.53 Aligned_cols=52 Identities=38% Similarity=0.411 Sum_probs=44.8
Q ss_pred EecCCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhh
Q psy10158 520 LKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLL 588 (1266)
Q Consensus 520 lKWGGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL 588 (1266)
-.+++.||+.|+.||+.+|+.|+.+|+ .-..||||+-.||+.||++|++++.
T Consensus 20 ~~~d~~Lt~~G~~qa~~l~~~l~~~~~-----------------~~~~v~sSp~~R~~~Ta~~~~~~~~ 71 (153)
T cd07040 20 GWGDGPLTEKGRQQARELGKALRERYI-----------------KFDRIYSSPLKRAIQTAEIILEGLF 71 (153)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHhCC-----------------CCCEEEECChHHHHHHHHHHHHHhc
Confidence 357899999999999999999996442 1346999999999999999999885
|
Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi |
| >COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0013 Score=75.26 Aligned_cols=152 Identities=20% Similarity=0.344 Sum_probs=99.8
Q ss_pred cCcc-chhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEec
Q psy10158 129 NNLN-MQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYP 207 (1266)
Q Consensus 129 Ndl~-~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp 207 (1266)
|+-. ....+-.|.+-|..|...|.|.|.+--+. .+..+ .+|.|+||+.|.
T Consensus 110 n~P~~~v~~~snk~~~~r~l~~lgmp~p~~~~~e----------------~~~~g----ekt~IlKPv~Ga--------- 160 (389)
T COG2232 110 NEPEVKVVEASNKLKFYRKLEVLGMPEPSEKKIE----------------PLEEG----EKTLILKPVSGA--------- 160 (389)
T ss_pred CCcHHHHHHHHHHHhhhhhhhhcCCCCChhhhhh----------------hhhhc----ceeeEEeeccCC---------
Confidence 4443 55566779999999999999988653321 11122 489999999995
Q ss_pred cCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCC---------CCceEEEEEECCceeEEeeccCCCCCCcee
Q psy10158 208 TSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPT---------DGTDVKVYTVGPDYAHAEARKSPALDGKVE 278 (1266)
Q Consensus 208 ~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t---------~GtDVKVYtVGp~~vhAe~RKSPvvDG~VR 278 (1266)
||. ++.+. ++-+.. -.-+|.||||+- +|.|....+|..+++- --|-. -+-|+
T Consensus 161 ----GG~---~el~~-----~~Ee~~---~~~~i~Qefi~G~p~Svs~is~g~~a~~la~N~QiI~-~~~~~---~~~f~ 221 (389)
T COG2232 161 ----GGL---VELVK-----FDEEDP---PPGFIFQEFIEGRPVSVSFISNGSDALTLAVNDQIID-GLRGE---YSQFV 221 (389)
T ss_pred ----Cce---eeecc-----cccccC---CcceehhhhcCCceeEEEEEecCcceEEEEEeeeeec-ccccc---cccce
Confidence 332 23221 111111 177899999972 5788888888888765 11111 11111
Q ss_pred ecCCCCceeeEeeCCHHHHHHHHHHHHHhCCc-cceeeEEeeCCCeEEEeecC
Q psy10158 279 RDSEGKEIRYPVILSNAEKLISRKVCLAFKQT-VCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 279 RN~hgKEiRypV~LT~eEK~IA~kaakAFGq~-VCGfDLLRs~ggsyVcDVNG 330 (1266)
--|-=+-+++.+-++-..+|..+..-||+. --|||+|-...||||+|||=
T Consensus 222 --Y~GNlTP~~~~~~ee~e~la~elV~~lgL~GsnGVDfvl~d~gpyViEVNP 272 (389)
T COG2232 222 --YKGNLTPFPYEEVEEAERLAEELVEELGLVGSNGVDFVLNDKGPYVIEVNP 272 (389)
T ss_pred --eccCcCCCcchhhHHHHHHHHHHHHHhccccccccceEeecCCcEEEEecC
Confidence 013334455555556677999999999984 67999999999999999994
|
|
| >PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0044 Score=72.02 Aligned_cols=163 Identities=20% Similarity=0.209 Sum_probs=93.6
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCC--CCchh
Q psy10158 138 QDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSA--GGGSQ 215 (1266)
Q Consensus 138 rDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~--GgGv~ 215 (1266)
+|++.-|.+|.++||++|++.-.. ..|..|+|+||.+|. . |.|.
T Consensus 125 ~dKk~~yk~L~~aGI~~Pk~~~~p----------------------~eId~PVIVKp~~as-----------G~~srG~- 170 (366)
T PRK13277 125 TGEKNYYWLLEKAGIPYPKLFKDP----------------------EEIDRPVIVKLPEAK-----------RRLERGF- 170 (366)
T ss_pred cCHHHHHHHHHHcCCCCceeecCc----------------------cccCccEEEEECCCC-----------CccccCe-
Confidence 568889999999999999998721 023489999999997 2 2333
Q ss_pred hhhcccCCccccccCCc-------cc--ccCcceEEeeccCCCCceEEEEEE--CC--ceeEEeeccCCCCCCceee---
Q psy10158 216 RLFRKIGSRSSVYSPES-------RV--RKSGSFIYEDFMPTDGTDVKVYTV--GP--DYAHAEARKSPALDGKVER--- 279 (1266)
Q Consensus 216 ~LfrKignkSS~y~p~s-------~v--r~~gSyIYEEFI~t~GtDVKVYtV--Gp--~~vhAe~RKSPvvDG~VRR--- 279 (1266)
| ++.|..- |.... .+ .....+|.||||.-.--.+-+|.. -+ .++..-.|----+||.+|-
T Consensus 171 --f-~a~s~eE-l~~~a~~l~~~g~I~~~~~~~~iIQEyI~G~ey~~d~F~s~l~g~ve~l~id~R~esn~dg~~r~pa~ 246 (366)
T PRK13277 171 --F-TASSYED-FYEKSEELIKAGVIDREDLKNARIEEYVIGAHFNFNYFYSPIRDRLELLGIDRRIQSNLDGFVRLPAP 246 (366)
T ss_pred --E-eeCCHHH-HHHHHHhhhhcCcccccccccceeEeccCCCEEEEEEEEeccCCcEEEEEEeeccccccccccccChh
Confidence 2 2222221 21110 11 122466899999732244446654 33 4555555533236887662
Q ss_pred ----------cCCCCceeeEeeCC----HHHHHHHHHHHHHhCC-----ccc--eeeEEee-CCCeEEEeecCceecccC
Q psy10158 280 ----------DSEGKEIRYPVILS----NAEKLISRKVCLAFKQ-----TVC--GFDLLRA-NGKSFVCDVNGFSFVKNS 337 (1266)
Q Consensus 280 ----------N~hgKEiRypV~LT----~eEK~IA~kaakAFGq-----~VC--GfDLLRs-~ggsyVcDVNGwSFVK~n 337 (1266)
...-|+ .++.++ ++=.+++.+++++++. .++ .+|.... ++..||+|||. -|+-+.
T Consensus 247 ~ql~~~~~p~~vv~G~--~p~t~rEslle~v~e~ger~v~a~~~~~~pg~iGpf~lQ~iv~~d~~~~V~EInp-R~gGGt 323 (366)
T PRK13277 247 QQLKLNEEPRYIEVGH--EPATIRESLLEKVFEIGEKFVEATKELYPPGIIGPFTLQTIVTPDLDFVVYDVAP-RIGGGT 323 (366)
T ss_pred hhhhcccCCceEEEcC--ccccchHHHHHHHHHHHHHHHHHhhhhcCcccccceEEEEEEcCCCcEEEEEEcC-CcCCCc
Confidence 111122 233333 3445677888899883 222 3555555 48899999984 455544
Q ss_pred chhh
Q psy10158 338 NKYY 341 (1266)
Q Consensus 338 ~kYY 341 (1266)
+-||
T Consensus 324 nl~~ 327 (366)
T PRK13277 324 NVYM 327 (366)
T ss_pred ccee
Confidence 4444
|
|
| >PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.00033 Score=75.25 Aligned_cols=164 Identities=19% Similarity=0.288 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||.++.+++++.|||+|.....--+. ..+..+... .+..|+++||..|- -|.|++ ++
T Consensus 1 Dk~~~~~~~~~~gvp~~pg~~~~~~~-------~eea~~~a~----~iGyPVliKas~gg-----------GG~gm~-iv 57 (211)
T PF02786_consen 1 DKIRFRKLAKKLGVPVPPGSTVPISS-------VEEALEFAE----EIGYPVLIKASAGG-----------GGRGMR-IV 57 (211)
T ss_dssp SHHHHHHHHHHTT-BBSSBESSSBSS-------HHHHHHHHH----HH-SSEEEEETTSS-----------TTTSEE-EE
T ss_pred CHHHHHHHHHHCCCCcCCCCCCCCCC-------HHHHHHHHH----hcCCceEEeecccc-----------cccccc-cc
Confidence 78999999999999999887762110 111111111 23499999999986 244553 44
Q ss_pred cccCCccccccCCcccc----cCcceEEeeccCC-CCceEEEEEECC-ceeEEeeccCCCCCCceeecCCCC--ceeeEe
Q psy10158 219 RKIGSRSSVYSPESRVR----KSGSFIYEDFMPT-DGTDVKVYTVGP-DYAHAEARKSPALDGKVERDSEGK--EIRYPV 290 (1266)
Q Consensus 219 rKignkSS~y~p~s~vr----~~gSyIYEEFI~t-~GtDVKVYtVGp-~~vhAe~RKSPvvDG~VRRN~hgK--EiRypV 290 (1266)
.....-.+.+......- .++.++.|+|+.. .--+|-|..=|. +++|.-.|-.- ..| -+|+ ++.=+.
T Consensus 58 ~~~~eL~~~~~~~~~~s~~~fg~~~v~iek~i~~~reiEvqvi~D~~gn~~~~~~~e~~-----~~~-hs~dsi~~~P~~ 131 (211)
T PF02786_consen 58 HNEEELEEAFERAQRESPAAFGDGPVLIEKFIEGAREIEVQVIRDGKGNVVHLGERECS-----EQR-HSQDSIEEAPAQ 131 (211)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSEEEEEEEEEEETTSEEEEEEEEEEE-----EEE-TTEEEEEEES-S
T ss_pred cchhhhhhhhhhccccCccccccceEEEeeehhhhhhhhhhhhhccccceeeeeeeccc-----ccc-ccccceeEeecc
Confidence 43211111111000111 2788999999984 434444433322 35555555541 222 2233 344455
Q ss_pred eCCHHHHH----HHHHHHHHhCC-ccceeeEEee--CCCeEEEeecCc
Q psy10158 291 ILSNAEKL----ISRKVCLAFKQ-TVCGFDLLRA--NGKSFVCDVNGF 331 (1266)
Q Consensus 291 ~LT~eEK~----IA~kaakAFGq-~VCGfDLLRs--~ggsyVcDVNGw 331 (1266)
.||+++++ +|.++|+++|. .+|-|-+|-. ++..||+|||=.
T Consensus 132 ~L~~~~~~~l~~~a~~ia~~l~~~G~~tvef~~~~~~~~~y~lEvNpR 179 (211)
T PF02786_consen 132 TLSDEERQKLREAAKKIARALGYVGAGTVEFAVDPDDGEFYFLEVNPR 179 (211)
T ss_dssp SS-HHHHHHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEEEEEEESS
T ss_pred ccchHHHHHHHHHHHHHHHhhCeeecceEEEEEccCccceeeecccCC
Confidence 79987754 78999999986 4788899998 799999999954
|
CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the ATP-binding domain found in the large subunit of carbamoyl phosphate synthase, as well as in related proteins.; GO: 0003824 catalytic activity, 0005524 ATP binding, 0008152 metabolic process; PDB: 3U9S_A 3U9T_A 2C00_B 2VQD_A 1W96_B 1W93_A 1M6V_C 1CS0_C 1C30_E 1C3O_G .... |
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0087 Score=68.45 Aligned_cols=213 Identities=26% Similarity=0.350 Sum_probs=131.7
Q ss_pred EEEEecCCccCChhHH-------------HHHHHHhhcCcEEEEEecccccccccccccccceeeccccCCCcH---HHH
Q psy10158 53 VGVCAMAKKSQSKPMK-------------EILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDCLISFHSKGFPL---EKA 116 (1266)
Q Consensus 53 iGVCAMd~Ka~SkPMr-------------~IL~RL~~~g~f~viiF~dkvILe~vE~WP~cD~LIsFfS~GfPL---~KA 116 (1266)
+=|.|.|+=+....|+ +-|..+++...+|.||=.=+-| ..|.|+-+-..||.+ .+|
T Consensus 36 ~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI--------~td~L~elE~~G~~VVP~ArA 107 (394)
T COG0027 36 VEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAI--------ATDALVELEEEGYTVVPNARA 107 (394)
T ss_pred CEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhh--------hHHHHHHHHhCCceEccchHH
Confidence 3477888888888886 5677777777888777432222 246666666778765 455
Q ss_pred HHHHhhcCCccccCccchhhhhH--HHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEec
Q psy10158 117 IKYANLRKPFVINNLNMQYDIQD--RRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKP 194 (1266)
Q Consensus 117 i~Y~klrkp~~lNdl~~Q~ilrD--Rr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKp 194 (1266)
-.+.-. |+ ||++-+-| |+||-+|-|++. +.|..+..+- |..|.|+||
T Consensus 108 t~ltMn---------------RegiRrlAAeeL---glpTs~Y~fa~s---------~~e~~~a~~~----iGfPcvvKP 156 (394)
T COG0027 108 TKLTMN---------------REGIRRLAAEEL---GLPTSKYRFADS---------LEELRAAVEK----IGFPCVVKP 156 (394)
T ss_pred HHhhhc---------------HHHHHHHHHHHh---CCCCcccccccc---------HHHHHHHHHH----cCCCeeccc
Confidence 444411 22 55555555 999999999974 2222233333 349999999
Q ss_pred ccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-cCcceEEeeccCCCC--ceEEEEEECCc--eeEEeec
Q psy10158 195 VSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-KSGSFIYEDFMPTDG--TDVKVYTVGPD--YAHAEAR 268 (1266)
Q Consensus 195 v~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-~~gSyIYEEFI~t~G--tDVKVYtVGp~--~vhAe~R 268 (1266)
+=++ .|.|. -+.++..+-..-++-- .--| ..+..|+|+||+-|= |=+-|=.+++. ||+-.--
T Consensus 157 vMSS-----------SGkGq-svv~~~e~ve~AW~~A~~g~R~~~~RVIVE~fv~fd~EiTlLtvr~~~~~~~Fc~PIGH 224 (394)
T COG0027 157 VMSS-----------SGKGQ-SVVRSPEDVEKAWEYAQQGGRGGSGRVIVEEFVKFDFEITLLTVRAVDGTGSFCAPIGH 224 (394)
T ss_pred cccc-----------CCCCc-eeecCHHHHHHHHHHHHhcCCCCCCcEEEEEEecceEEEEEEEEEEecCCCCcCCCccc
Confidence 9887 68886 4777654333322211 1112 578899999999532 44444444444 5543222
Q ss_pred cCCCCCCceeecCCCCceeeEeeCCHH----HHHHHHHHHHHhC-CccceeeEEeeCCCeE
Q psy10158 269 KSPALDGKVERDSEGKEIRYPVILSNA----EKLISRKVCLAFK-QTVCGFDLLRANGKSF 324 (1266)
Q Consensus 269 KSPvvDG~VRRN~hgKEiRypV~LT~e----EK~IA~kaakAFG-q~VCGfDLLRs~ggsy 324 (1266)
+- .||+. -|.-+|-.+|+. -+.||.+|+.|+| ..+-||.|.-+.+.-|
T Consensus 225 rq--~dgdY------~ESWQP~~mS~~al~~A~~IA~~vt~aLGG~GiFGVElfv~gDeV~ 277 (394)
T COG0027 225 RQ--EDGDY------RESWQPQEMSEAALEEAQSIAKRVTDALGGRGLFGVELFVKGDEVI 277 (394)
T ss_pred cc--CCCCh------hcccCccccCHHHHHHHHHHHHHHHHhhcCccceeEEEEEeCCEEE
Confidence 22 15555 678889999984 4567888888885 6788888744443333
|
|
| >COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.038 Score=64.99 Aligned_cols=194 Identities=15% Similarity=0.160 Sum_probs=112.6
Q ss_pred cceeeccccCCCcHHHHHHHHhh-----cC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccc
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANL-----RK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELV 173 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~kl-----rk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~ 173 (1266)
.|++++-++-..+|.-|++--+. .+ +.+.++.++..+..||++..+.+.++|+|+|.. +++. ..
T Consensus 71 ~Dailp~~ggqt~Ln~~~~l~e~g~l~~~gV~vvgs~~eaI~iaeDr~~fke~m~eigi~~P~~-~~~~---------~~ 140 (400)
T COG0458 71 PDAILPTLGGQTALNAALELKEKGVLEKYGVEVVGSDPEAIEIAEDKKLFKEAMREIGIPVPSR-IAHS---------VE 140 (400)
T ss_pred cceeecccCCcchhhHHHHHHHhcchhhcCCEEEecCHHHhhhhhhHHHHHHHHHHcCCCCCcc-cccc---------HH
Confidence 39999999999999655554432 23 567799999999999999999999999999922 2221 22
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCcccccc-CCcccc--cCcceEEeeccCCCC
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYS-PESRVR--KSGSFIYEDFMPTDG 250 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~-p~s~vr--~~gSyIYEEFI~t~G 250 (1266)
+..+.+..-| .|+|+||-.|. -|.|+. .++. ++..-. ....++ .-...+.||||.-..
T Consensus 141 e~~~~~~~ig----~PvIVrP~~~l-----------GG~G~~-i~~n---~eel~~~~~~~l~~s~~~~vl~eesi~G~k 201 (400)
T COG0458 141 EADEIADEIG----YPVIVKPSFGL-----------GGSGGG-IAYN---EEELEEIIEEGLRASPVEEVLIEESIIGWK 201 (400)
T ss_pred HHhhhHhhcC----CCEEEecCcCC-----------CCCcee-EEeC---HHHHHHHHHhccccCccccceeeeeecCce
Confidence 3344444444 99999999987 233553 4442 111100 000111 123556788876422
Q ss_pred --ceEEEEEECCc--eeEEeeccCCCCCCceeecCCCCceeeE---eeCCHHHHHHH----HHHHHHhCCc-cceeeEEe
Q psy10158 251 --TDVKVYTVGPD--YAHAEARKSPALDGKVERDSEGKEIRYP---VILSNAEKLIS----RKVCLAFKQT-VCGFDLLR 318 (1266)
Q Consensus 251 --tDVKVYtVGp~--~vhAe~RKSPvvDG~VRRN~hgKEiRyp---V~LT~eEK~IA----~kaakAFGq~-VCGfDLLR 318 (1266)
+=+.+..--.+ ++-.|.+-=| .| .|-++..+. -.|++.|-++. .++.+++|.. =|-|+.--
T Consensus 202 e~e~ev~rd~~~n~ivvc~men~dp--~g-----vhtgdsi~vapaqtl~d~eyq~~r~~~~~iir~igi~G~~niQ~av 274 (400)
T COG0458 202 EFEYEVVRDGKDNCIVVCNMENLDP--MG-----VHTGDSITVAPAQTLTDKEYQMLRDAAIKVIREIGIEGGCNIQFAV 274 (400)
T ss_pred EEEEEEEEeCCCCEEEEEeCCcccc--cc-----ccccceeeeccccccccHHHHHHHHHHHHHHHHhcccCCCceeEEE
Confidence 11111111111 2223444433 22 233443332 24677666554 4778888866 24455544
Q ss_pred eC--CCeEEEeec
Q psy10158 319 AN--GKSFVCDVN 329 (1266)
Q Consensus 319 s~--ggsyVcDVN 329 (1266)
.. +..||+|||
T Consensus 275 ~~~~~~~~viEvN 287 (400)
T COG0458 275 DPGGGELYVIEIN 287 (400)
T ss_pred cCCCceEEEEEec
Confidence 43 468999999
|
|
| >KOG3895|consensus | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.0047 Score=71.04 Aligned_cols=180 Identities=21% Similarity=0.310 Sum_probs=128.2
Q ss_pred HHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhc-------CCCCCCeEEeccCCCCCccccccccCCeEEEcCeEec
Q psy10158 115 KAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKE-------GIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFN 187 (1266)
Q Consensus 115 KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~-------gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~ 187 (1266)
-++.|+ +.+.||.+.+.+-+-||--+...|.+. .+|+=.-.+- -.+...+..- .
T Consensus 179 ig~qya---giP~vNSl~SvynFcdkpwvf~Qlvki~~slG~e~fPli~qt~y------------PnHK~m~s~~----t 239 (488)
T KOG3895|consen 179 IGLQYA---GIPSVNSLTSVYNFCDKPWVFAQLVKITKSLGPEKFPLIEQTFY------------PNHKEMLSQP----T 239 (488)
T ss_pred HHHHhc---CCcccchhHHHHHhccchHHHHHHHHHHHhcCccccccceeeec------------CCchhhccCC----C
Confidence 455565 568899999999999988887777653 2332111111 1122333333 3
Q ss_pred CCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-cCcceEEeeccCCCCceEEEEEECCceeEEe
Q psy10158 188 KPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-KSGSFIYEDFMPTDGTDVKVYTVGPDYAHAE 266 (1266)
Q Consensus 188 kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe 266 (1266)
.|+|+|--.|- +|.|-. |+.|....-+-++.+. .+.-.-.|-||.. --||||--+|.+|-+=|
T Consensus 240 yPvVVkvghah-----------sGmGKi----KV~Nh~dfqDi~svval~~Tyat~epFiDa-KYDiriQKIG~nYKaym 303 (488)
T KOG3895|consen 240 YPVVVKVGHAH-----------SGMGKI----KVENHEDFQDIASVVALTKTYATAEPFIDA-KYDIRIQKIGHNYKAYM 303 (488)
T ss_pred CcEEEEecccc-----------ccccee----eecchhhhHhHHHHHHHHhhhhhccccccc-cceeehhhhhhhHHHHh
Confidence 89999998876 688854 5666555545444444 3444457888887 47999999999987665
Q ss_pred eccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHhC-CccceeeEEee-CCCeEEEeecCcee
Q psy10158 267 ARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFK-QTVCGFDLLRA-NGKSFVCDVNGFSF 333 (1266)
Q Consensus 267 ~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAFG-q~VCGfDLLRs-~ggsyVcDVNGwSF 333 (1266)
|.| +-|....|+ |-.+-+.|..++..|...-.++..|| ++||.||+|-+ .|+=||+|||+-|.
T Consensus 304 -Rts--IsgnWKtNt-GSamLEQIamseRyklwvdtcse~fGgldICav~alhsKdGrd~i~eV~d~sm 368 (488)
T KOG3895|consen 304 -RTS--ISGNWKTNT-GSAMLEQIAMSERYKLWVDTCSEMFGGLDICAVKALHSKDGRDYIIEVMDSSM 368 (488)
T ss_pred -hhh--hccCcccCc-hHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEeeeeecccchhheeeeccccc
Confidence 555 588888886 56666778888899988888888885 89999999999 68999999998553
|
|
| >PRK10172 phosphoanhydride phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.01 Score=70.44 Aligned_cols=65 Identities=28% Similarity=0.213 Sum_probs=51.9
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccc-cccceEEecCchhHHHHHHHHHHHhhcccC
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAAFAKGLLALEG 592 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~-rhDlKIYSSdEgRVq~TAaaFAkglL~lEg 592 (1266)
.|+||..|+.|--+||+.||..|=. .|||--+..| ..++.|+|++-.|+++||++|..||.--.|
T Consensus 70 ~GqLT~~G~~~~~~lG~~lR~rY~~-----~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~GlyP~c~ 135 (436)
T PRK10172 70 LGWLTPRGGELVTLLGHYQRQRLVA-----DGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGLAPDCA 135 (436)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHh-----cCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhcCCCCC
Confidence 4999999999999999999987742 2676322122 457999998888999999999999987554
|
|
| >TIGR03162 ribazole_cobC alpha-ribazole phosphatase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.014 Score=59.17 Aligned_cols=47 Identities=23% Similarity=0.210 Sum_probs=38.5
Q ss_pred cCCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 522 WGGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
+.-.||..|+.||+.||+.|+. ... | .||||+..|++.||+++++.+
T Consensus 20 ~d~~Lt~~G~~qa~~l~~~l~~---------~~~---------~-~i~sSpl~Ra~qTA~~i~~~~ 66 (177)
T TIGR03162 20 TDVPLAEKGAEQAAALREKLAD---------VPF---------D-AVYSSPLSRCRELAEILAERR 66 (177)
T ss_pred CCCCcChhHHHHHHHHHHHhcC---------CCC---------C-EEEECchHHHHHHHHHHHhhc
Confidence 4458999999999999999972 011 2 599999999999999998753
|
Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins. |
| >KOG3672|consensus | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.043 Score=64.20 Aligned_cols=70 Identities=29% Similarity=0.302 Sum_probs=53.6
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccCCcCcee
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPIL 598 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEgeLtPIl 598 (1266)
|+||..|-.|--.+|..||..|---- +.+ .-|.---.|+-++|+--+|.-.||-||-=+||-- -...||-
T Consensus 167 G~LT~~G~~QhL~~G~~~r~~Y~k~~---lk~-~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~~lp~-~~w~~i~ 236 (487)
T KOG3672|consen 167 GMLTAEGALQHLRLGKYFRHRYEKTK---LKA-DPNQRSVADLYVVTTKYNRTVQSALAFLFLYLPR-TFWAPIQ 236 (487)
T ss_pred cceeHHhHHHHHhhhHHHHHHHhhcc---ccC-CccccccceeEEEeccccHHHHHHHHHHHHhcch-hhhheee
Confidence 99999999999999999997775420 111 1344455688899999999999999998777763 3566663
|
|
| >PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.023 Score=55.27 Aligned_cols=46 Identities=37% Similarity=0.328 Sum_probs=37.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
-||..|+.||+.+|+.|.. .. ..--.||+|.-.||+.||+++++++
T Consensus 25 ~Lt~~G~~qA~~~~~~l~~----------~~-------~~~~~i~~Sp~~R~~qTA~~~~~~~ 70 (158)
T PF00300_consen 25 PLTERGREQARQLGEYLAE----------RD-------IQIDVIYSSPLRRCIQTAEIIAEGL 70 (158)
T ss_dssp GBEHHHHHHHHHHHHHHHH----------TT-------SSCSEEEEESSHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhhcccccc----------cc-------cCceEEecCCcchhhhhhchhhccc
Confidence 3999999999999999883 00 0112399999999999999999954
|
Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B .... |
| >COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.029 Score=58.52 Aligned_cols=48 Identities=35% Similarity=0.316 Sum_probs=38.9
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhc
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLA 589 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~ 589 (1266)
.||..|+.||+.||+.++. .++ ..-.||||+-.|++.||++.|+.+-.
T Consensus 28 pLt~~G~~QA~~l~~~l~~---------~~~--------~~~~i~sS~l~Ra~~TA~~~a~~~~~ 75 (208)
T COG0406 28 PLTEEGRAQAEALAERLAA---------RDI--------GFDAIYSSPLKRAQQTAEPLAEELGL 75 (208)
T ss_pred CCCHHHHHHHHHHHHHHhh---------cCC--------CCCEEEECchHHHHHHHHHHHHhcCC
Confidence 8999999999999999993 011 12348999999999999999876543
|
|
| >PRK03482 phosphoglycerate mutase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.032 Score=58.98 Aligned_cols=43 Identities=35% Similarity=0.443 Sum_probs=36.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.|.. .++ | +||||+-.|++-||+++++.
T Consensus 27 ~Lt~~G~~qA~~~~~~l~~---------~~~---------~-~I~sSpl~Ra~qTA~~i~~~ 69 (215)
T PRK03482 27 PLTAKGEQQAMQVAERAKE---------LGI---------T-HIISSDLGRTRRTAEIIAQA 69 (215)
T ss_pred CcCHHHHHHHHHHHHHHhc---------CCC---------C-EEEECCcHHHHHHHHHHHHh
Confidence 6999999999999999973 111 2 69999999999999999864
|
|
| >cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.041 Score=54.19 Aligned_cols=46 Identities=35% Similarity=0.422 Sum_probs=38.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+.+ + + .--.||||+-.|++.||+++++.+
T Consensus 25 ~Lt~~G~~qa~~~~~~l~~~---------~-------~-~~~~i~~Sp~~Ra~qTa~~l~~~~ 70 (153)
T cd07067 25 PLTEKGREQARALGKRLKEL---------G-------I-KFDRIYSSPLKRAIQTAEIILEEL 70 (153)
T ss_pred CCCHHHHHHHHHHHHHHHhc---------C-------C-CCCEEEECcHHHHHHHHHHHHHhc
Confidence 69999999999999999841 1 1 123699999999999999999887
|
Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos |
| >PTZ00123 phosphoglycerate mutase like-protein; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.041 Score=59.82 Aligned_cols=46 Identities=30% Similarity=0.400 Sum_probs=37.9
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+. .++ .+ | +||||+-.|++-||+++++++
T Consensus 14 pLTe~G~~QA~~l~~~L~~---------~~~-----~~--d-~iysSpl~Ra~qTA~~i~~~~ 59 (236)
T PTZ00123 14 PLSEKGVQEAREAGKLLKE---------KGF-----RF--D-VVYTSVLKRAIKTAWIVLEEL 59 (236)
T ss_pred CCCHHHHHHHHHHHHHHHh---------cCC-----CC--C-EEEECChHHHHHHHHHHHHhc
Confidence 6999999999999999983 111 11 2 699999999999999999765
|
|
| >PTZ00122 phosphoglycerate mutase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.049 Score=61.70 Aligned_cols=52 Identities=25% Similarity=0.313 Sum_probs=39.3
Q ss_pred cChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhh
Q psy10158 526 LTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLL 588 (1266)
Q Consensus 526 lThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL 588 (1266)
||..|+.||+.||+.|+.++.. .|..+.-| .||||+=.|++.||++++.++.
T Consensus 126 LTe~G~~QA~~lg~~L~~~~~~----------~~~~~~~d-~IysSPL~RA~qTAeiIa~~~~ 177 (299)
T PTZ00122 126 LTELGKEQARITGKYLKEQFGE----------ILVDKKVK-AIYHSDMTRAKETAEIISEAFP 177 (299)
T ss_pred CCHHHHHHHHHHHHHHHHhhcc----------ccccCCCC-EEEEcCcHHHHHHHHHHHHhCC
Confidence 9999999999999999953211 01111223 6999999999999999987753
|
|
| >TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.05 Score=57.07 Aligned_cols=44 Identities=30% Similarity=0.297 Sum_probs=37.1
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+. + .+ | .||||+-.|++.||+++++.+
T Consensus 26 ~Lt~~G~~qa~~l~~~l~~-----------~-----~~--~-~i~sSpl~Ra~qTA~~i~~~~ 69 (204)
T TIGR03848 26 DLDERGREQAAALAERLAD-----------L-----PI--A-AIVSSPLERCRETAEPIAEAR 69 (204)
T ss_pred CcCHHHHHHHHHHHHHHhc-----------C-----CC--C-EEEeCcHHHHHHHHHHHHHhc
Confidence 5999999999999999983 0 01 2 599999999999999998754
|
A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase. |
| >PRK14115 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.065 Score=58.93 Aligned_cols=46 Identities=28% Similarity=0.342 Sum_probs=37.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
-||..|+.||+.||+.|+. .++ .+ | .||||+=.|++.||++++..+
T Consensus 26 pLte~G~~QA~~la~~L~~---------~~~-----~~--d-~IysSpl~Ra~qTA~~i~~~~ 71 (247)
T PRK14115 26 DLSEKGVSEAKAAGKLLKE---------EGY-----TF--D-VAYTSVLKRAIRTLWIVLDEL 71 (247)
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-----CC--C-EEEEcCCHHHHHHHHHHHHHc
Confidence 4999999999999999983 111 11 3 599999999999999997643
|
|
| >PRK13463 phosphatase PhoE; Provisional | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.06 Score=56.85 Aligned_cols=43 Identities=33% Similarity=0.430 Sum_probs=36.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.|+. + .+ | .||||+-.|++-||++++..
T Consensus 28 ~Lt~~G~~Qa~~~~~~l~~-----------~-----~~--~-~i~sSpl~Ra~qTA~~i~~~ 70 (203)
T PRK13463 28 ALTENGILQAKQLGERMKD-----------L-----SI--H-AIYSSPSERTLHTAELIKGE 70 (203)
T ss_pred CcCHHHHHHHHHHHHHhcC-----------C-----CC--C-EEEECCcHHHHHHHHHHHhc
Confidence 6999999999999999872 1 11 2 59999999999999999753
|
|
| >PRK13462 acid phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.063 Score=57.17 Aligned_cols=42 Identities=33% Similarity=0.305 Sum_probs=34.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaF 583 (1266)
.||..|+.||+.+|+.++. .+ +.. ..||||+-.|++.||++.
T Consensus 31 pLt~~G~~QA~~l~~~l~~---------~~-------~~~-~~i~sSpl~Ra~qTA~~i 72 (203)
T PRK13462 31 ELTETGRTQAELAGQALGE---------LE-------LDD-PLVISSPRRRALDTAKLA 72 (203)
T ss_pred CCCHHHHHHHHHHHHHHHh---------CC-------CCC-CEEEECchHHHHHHHHHh
Confidence 5999999999999998873 11 211 159999999999999986
|
|
| >PRK15004 alpha-ribazole phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.068 Score=56.01 Aligned_cols=43 Identities=33% Similarity=0.356 Sum_probs=36.6
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.|+. .. + | +||||+-.|++.||++++++
T Consensus 26 pLt~~G~~Qa~~~~~~l~~---------~~-------~--~-~i~sSpl~Ra~qTA~~i~~~ 68 (199)
T PRK15004 26 PLTARGIEQAQNLHTLLRD---------VP-------F--D-LVLCSELERAQHTARLVLSD 68 (199)
T ss_pred CcCHHHHHHHHHHHHHHhC---------CC-------C--C-EEEECchHHHHHHHHHHHhc
Confidence 4999999999999999983 11 1 2 59999999999999999875
|
|
| >PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.044 Score=59.09 Aligned_cols=163 Identities=17% Similarity=0.261 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCE-EEecccccCcceEEEeccCCCCchhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF-VEKPVSAEDHNIYIYYPTSAGGGSQRL 217 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPf-VeKpv~GedHNI~IYyp~s~GgGv~~L 217 (1266)
+|.-+=++++++|||++++..... ..+..++|.-.+ .|. |+|+ +|- .+|.||. +
T Consensus 2 SK~faK~fm~~~~IPTa~~~~f~~---------~~~A~~~l~~~~----~p~~ViKa-dGl----------a~GKGV~-i 56 (194)
T PF01071_consen 2 SKSFAKEFMKRYGIPTAKYKVFTD---------YEEALEYLEEQG----YPYVVIKA-DGL----------AAGKGVV-I 56 (194)
T ss_dssp BHHHHHHHHHHTT-SB--EEEESS---------HHHHHHHHHHHS----SSEEEEEE-SSS----------CTTTSEE-E
T ss_pred CHHHHHHHHHHcCCCCCCeeEECC---------HHHHHHHHHhcC----CCceEEcc-CCC----------CCCCEEE-E
Confidence 466777899999999999888764 223444453333 777 9998 443 2567763 4
Q ss_pred hcccCCcccccc---CCccc-ccCcceEEeeccCCCCceEEEEEECCceeEEe-----eccCCCCCCceeecCCCCceee
Q psy10158 218 FRKIGSRSSVYS---PESRV-RKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAE-----ARKSPALDGKVERDSEGKEIRY 288 (1266)
Q Consensus 218 frKignkSS~y~---p~s~v-r~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe-----~RKSPvvDG~VRRN~hgKEiRy 288 (1266)
+........... .+..+ ..+...|.|||+.-.---+=++|=|..|+.-- .|-- ||+-=-|+-|=|.=.
T Consensus 57 ~~~~~eA~~~l~~~~~~~~fg~~~~~vvIEE~l~G~E~S~~a~~dG~~~~~lp~aqD~Kr~~---dgd~GpnTGGMGa~s 133 (194)
T PF01071_consen 57 ADDREEALEALREIFVDRKFGDAGSKVVIEEFLEGEEVSLFALTDGKNFVPLPPAQDHKRLF---DGDTGPNTGGMGAYS 133 (194)
T ss_dssp ESSHHHHHHHHHHHHTSSTTCCCGSSEEEEE---SEEEEEEEEEESSEEEEEEEBEEEEEEE---TTTEEEEESESEEEE
T ss_pred eCCHHHHHHHHHHhccccccCCCCCcEEEEeccCCeEEEEEEEEcCCeEEECcchhcccccc---CCCCCCCCCCcccee
Confidence 432210000000 00011 13578999999973334555666777665322 2333 888888998877777
Q ss_pred EeeC-CHHH-----HHHHHHHHHHh---CCcccee---eEEeeCCCeEEEeec
Q psy10158 289 PVIL-SNAE-----KLISRKVCLAF---KQTVCGF---DLLRANGKSFVCDVN 329 (1266)
Q Consensus 289 pV~L-T~eE-----K~IA~kaakAF---Gq~VCGf---DLLRs~ggsyVcDVN 329 (1266)
|+.. |++. +.|...+.+++ |...+|| .|+=+..||+|+|-|
T Consensus 134 p~p~~~~~~~~~i~~~I~~pt~~~l~~eg~~y~GvLy~glMlt~~Gp~vlEfN 186 (194)
T PF01071_consen 134 PVPFITDELLEEIIEEILEPTLKGLKKEGIPYRGVLYAGLMLTEDGPKVLEFN 186 (194)
T ss_dssp STTTS-HHHHHHHHHHTHHHHHHHHHHTT---EEEEEEEEEEETTEEEEEEEE
T ss_pred ecccCCHHHHHHHHHHHHHHHHHHHHhcCCCcceeeeeeeEEeCCCcEEEEEe
Confidence 7755 5543 22334444444 5666665 666678999999998
|
3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: |
| >PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.086 Score=57.25 Aligned_cols=43 Identities=28% Similarity=0.335 Sum_probs=36.3
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAK 585 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAk 585 (1266)
.||..|+.||+.+|+.|+. .+ .. | .||||+-.|++.||++|+.
T Consensus 79 pLTerG~~qA~~lg~~L~~---------~~-------~~-d-~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 79 GITVKGTQDARELGKAFSA---------DI-------PD-Y-DLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CCCHHHHHHHHHHHHHHhC---------CC-------CC-C-EEEECCCHHHHHHHHHHhc
Confidence 3999999999999999983 11 11 4 7999999999999999976
|
|
| >PRK14118 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.099 Score=56.51 Aligned_cols=46 Identities=22% Similarity=0.265 Sum_probs=37.5
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. + +.-| .||||+=.|++.||+++++.+
T Consensus 26 ~Lt~~G~~qa~~~~~~l~~~---------~-------~~~d-~i~sSpl~Ra~~TA~~i~~~~ 71 (227)
T PRK14118 26 NLTERGVEEAKAAGKKLKEA---------G-------YEFD-IAFTSVLTRAIKTCNIVLEES 71 (227)
T ss_pred CCCHHHHHHHHHHHHHHHhc---------C-------CCCC-EEEEeChHHHHHHHHHHHHhc
Confidence 69999999999999999830 1 1113 599999999999999998753
|
|
| >PRK14116 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.093 Score=56.74 Aligned_cols=45 Identities=29% Similarity=0.375 Sum_probs=36.5
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.++. .++ .+ | .||||+=.|++.||++++++
T Consensus 27 pLt~~G~~QA~~l~~~L~~---------~~~-----~~--d-~i~sSpL~Ra~qTA~~i~~~ 71 (228)
T PRK14116 27 DLSEKGVEEAKKAGRLIKE---------AGL-----EF--D-QAYTSVLTRAIKTLHYALEE 71 (228)
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-----CC--C-EEEECChHHHHHHHHHHHHh
Confidence 5999999999999999883 111 01 3 59999999999999999764
|
|
| >TIGR00249 sixA phosphohistidine phosphatase SixA | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.13 Score=52.62 Aligned_cols=46 Identities=22% Similarity=0.235 Sum_probs=38.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+. .++ .-| .||||+=.|++.||+++++.+
T Consensus 22 ~Lt~~G~~qa~~~~~~l~~---------~~~-------~~d-~i~sSp~~Ra~qTa~~l~~~~ 67 (152)
T TIGR00249 22 PLTTNGCDESRLVAQWLKG---------QGV-------EIE-RILVSPFVRAEQTAEIVGDCL 67 (152)
T ss_pred CcCHHHHHHHHHHHHHHHh---------CCC-------CCC-EEEECCcHHHHHHHHHHHHHc
Confidence 5999999999999999984 111 112 699999999999999999876
|
|
| >TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1 | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.12 Score=56.91 Aligned_cols=46 Identities=26% Similarity=0.325 Sum_probs=37.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.+.. .++ .+ | .||||+=.|++.||++++..+
T Consensus 26 ~Lt~~G~~QA~~la~~L~~---------~~~-----~~--d-~iysSpl~Ra~qTA~ii~~~~ 71 (245)
T TIGR01258 26 KLSEKGQQEAKRAGELLKE---------EGY-----EF--D-VAYTSLLKRAIHTLNIALDEL 71 (245)
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-----CC--C-EEEEcChHHHHHHHHHHHHhc
Confidence 8999999999999999983 111 11 2 599999999999999998754
|
Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically. |
| >PRK01295 phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.12 Score=55.01 Aligned_cols=46 Identities=33% Similarity=0.484 Sum_probs=37.4
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+. .++ .+ | .||||+=.|++.||++++..+
T Consensus 28 ~Lt~~G~~qA~~~~~~L~~---------~~~-----~~--d-~i~sSpl~Ra~qTA~~i~~~~ 73 (206)
T PRK01295 28 DLTEQGVAEAKAAGRKLKA---------AGL-----KF--D-IAFTSALSRAQHTCQLILEEL 73 (206)
T ss_pred CcCHHHHHHHHHHHHHHHh---------CCC-----CC--C-EEEeCCcHHHHHHHHHHHHHc
Confidence 5999999999999999983 111 01 2 599999999999999998754
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.37 Score=56.60 Aligned_cols=173 Identities=16% Similarity=0.213 Sum_probs=101.4
Q ss_pred HHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEec
Q psy10158 115 KAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKP 194 (1266)
Q Consensus 115 KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKp 194 (1266)
.|++++... ..+-=......+++||+.==+.|++.|||+|.+..+..... ..+.+ ..|..|+|+|.
T Consensus 76 ~aL~~l~~~-~~v~p~~~~l~~~qdR~~eK~~l~~~Gi~va~~~~v~~~~e---------l~~~~----~~~g~p~VlKt 141 (375)
T COG0026 76 EALEKLAAS-VKVFPSPDALRIAQDRLVEKQFLDKAGLPVAPFQVVDSAEE---------LDAAA----ADLGFPAVLKT 141 (375)
T ss_pred HHHHHHHhh-cCcCCCHHHHHHHhhHHHHHHHHHHcCCCCCCeEEeCCHHH---------HHHHH----HHcCCceEEEe
Confidence 455555554 23334567778899999999999999999999999965211 11222 22348999999
Q ss_pred ccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCC
Q psy10158 195 VSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALD 274 (1266)
Q Consensus 195 v~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvD 274 (1266)
--|- | .|.|.. ..+......+... .....+..|.|+|++=+.+ |-|.++ +-.--+.+-=|+
T Consensus 142 r~gG----Y------DGkGQ~-~i~~~~~~~~~~~---~~~~~~~~vlE~fV~F~~E-iSvi~a--R~~~G~~~~yP~-- 202 (375)
T COG0026 142 RRGG----Y------DGKGQW-RIRSDADLELRAA---GLAEGGVPVLEEFVPFERE-ISVIVA--RSNDGEVAFYPV-- 202 (375)
T ss_pred cccc----c------cCCCeE-EeeCcccchhhHh---hhhccCceeEEeecccceE-EEEEEE--EcCCCCEEEecc--
Confidence 9874 1 488875 4443221111000 1122344499999996432 334333 111122233332
Q ss_pred CceeecCCCCceeeEee----CCH----HHHHHHHHHHHHhCC-ccceeeEEeeCCCe
Q psy10158 275 GKVERDSEGKEIRYPVI----LSN----AEKLISRKVCLAFKQ-TVCGFDLLRANGKS 323 (1266)
Q Consensus 275 G~VRRN~hgKEiRypV~----LT~----eEK~IA~kaakAFGq-~VCGfDLLRs~ggs 323 (1266)
--|.|..++-.-+. +++ +-++||.+++.+++. .|-||.+--..+|-
T Consensus 203 ---~eN~h~~gIl~~siaPa~i~~~~~~~A~~~a~~i~~~L~yvGVl~vE~Fv~~dg~ 257 (375)
T COG0026 203 ---AENVHRNGILRTSIAPARIPDDLQAQAEEMAKKIAEELDYVGVLAVEFFVTPDGE 257 (375)
T ss_pred ---cceeeecCEEEEEEecCcCCHHHHHHHHHHHHHHHHHcCceEEEEEEEEEECCCc
Confidence 24777777643322 343 456788888887764 46667776666643
|
|
| >PF14305 ATPgrasp_TupA: TupA-like ATPgrasp | Back alignment and domain information |
|---|
Probab=93.40 E-value=1 Score=49.87 Aligned_cols=173 Identities=18% Similarity=0.245 Sum_probs=97.7
Q ss_pred hhhhhHHHHHHHHHHhcC--CCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCC
Q psy10158 134 QYDIQDRRKVYALLEKEG--IEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAG 211 (1266)
Q Consensus 134 Q~ilrDRr~vlqiL~~~g--Ip~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~G 211 (1266)
-..+-||..|-..+++.+ ..+|..+-+-.+. + .++-..+..+||+||..|+. .+.|+..++..
T Consensus 15 ~~~~~DK~~VR~yv~~~~g~~~l~pll~v~~~~------------~--~i~~~~Lp~~fViK~nhgsg-~~~i~~dk~~~ 79 (239)
T PF14305_consen 15 FTKLADKYAVREYVEEKIGEEYLPPLLGVYDNP------------D--DIDFDSLPDKFVIKPNHGSG-SNIIVRDKSKL 79 (239)
T ss_pred ceecchHHHHHHHHHHhCCCceECceeecCCCh------------h--hhhhhcCCCCEEEEEecCCC-cEEEEeCCccc
Confidence 346789999999999886 3444444443211 1 12223456899999999986 34445544332
Q ss_pred Cc--hhhhhcc-cCCccccccCCcccc-cCcceEEeeccCC-CC---ceEEEEEECCc--eeEEeeccCCCCCCceeecC
Q psy10158 212 GG--SQRLFRK-IGSRSSVYSPESRVR-KSGSFIYEDFMPT-DG---TDVKVYTVGPD--YAHAEARKSPALDGKVERDS 281 (1266)
Q Consensus 212 gG--v~~LfrK-ignkSS~y~p~s~vr-~~gSyIYEEFI~t-~G---tDVKVYtVGp~--~vhAe~RKSPvvDG~VRRN~ 281 (1266)
-= +++.+++ ....-.....+...+ -.--.|.||||.. +| .|.|+|+.+++ ++....... |.-+++.
T Consensus 80 d~~~~~~~~~~wl~~~~~~~~~E~~Y~~i~prIivE~~l~~~~~~~~~DYKf~cF~G~~~~i~v~~~r~----~~~~~~~ 155 (239)
T PF14305_consen 80 DIEEAKKKLNRWLKKDYYYQSREWHYKNIKPRIIVEELLEDEDGKIPRDYKFFCFNGKPKFIQVDSDRF----GNHKRNF 155 (239)
T ss_pred CHHHHHHHHHHHhhhccccccccccCcCCCceEEEEeccccCCCCCcceEEEEEECCEEEEEEEEeCCC----CCeEEEE
Confidence 21 1111111 111111112222221 2446899999995 55 79999999985 555555432 1112111
Q ss_pred ---------------CCCceeeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeCCCeEEEee
Q psy10158 282 ---------------EGKEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDV 328 (1266)
Q Consensus 282 ---------------hgKEiRypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~ggsyVcDV 328 (1266)
.+..+..|-.| ++-.++|.++|+-|. .|=|||..++|+.|+-|.
T Consensus 156 yd~dw~~l~~~~~~~~~~~~~kP~~l-~emi~iA~~Ls~~f~--fvRVDlY~~~~~iyFGEl 214 (239)
T PF14305_consen 156 YDRDWNRLPFRSDYPPDEDIPKPKNL-EEMIEIAEKLSKGFP--FVRVDLYNVDGKIYFGEL 214 (239)
T ss_pred ECcccCCCccccCCCCCCCCCCChhH-HHHHHHHHHHccCCC--EEEEEEEEeCCcEEEEee
Confidence 12222222222 344566777777654 688999999999999987
|
|
| >PRK01112 phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.13 Score=56.08 Aligned_cols=44 Identities=27% Similarity=0.240 Sum_probs=37.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+. ..+ | .||||+=.|++.||+++++.+
T Consensus 27 ~Lte~G~~Qa~~l~~~L~~---------~~~---------d-~iysSpl~Ra~qTA~~i~~~~ 70 (228)
T PRK01112 27 PLSQQGIAEAIAAGEKIKD---------LPI---------D-CIFTSTLVRSLMTALLAMTNH 70 (228)
T ss_pred CcCHHHHHHHHHHHHHhhc---------CCC---------C-EEEEcCcHHHHHHHHHHHHhh
Confidence 7999999999999999983 011 2 599999999999999998644
|
|
| >smart00855 PGAM Phosphoglycerate mutase family | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.17 Score=50.45 Aligned_cols=50 Identities=38% Similarity=0.367 Sum_probs=39.0
Q ss_pred cCCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 522 WGGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
..-.||..|+.||+.+|+.|+.+ + ...=-.||||+-.|++.||+++++.+
T Consensus 22 ~d~~Lt~~G~~qa~~~a~~l~~~---------~-------~~~~~~i~sSpl~Ra~qTa~~i~~~~ 71 (155)
T smart00855 22 TDSPLTELGRAQAEALGELLASL---------G-------RLRFDVIYSSPLLRARETAEALAIAL 71 (155)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhc---------c-------CCCCCEEEeCchHHHHHHHHHHHHhc
Confidence 34579999999999999999841 0 00122499999999999999997654
|
Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. |
| >PRK07238 bifunctional RNase H/acid phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.18 Score=58.01 Aligned_cols=45 Identities=40% Similarity=0.381 Sum_probs=37.4
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+.. + .+ | .||||+-.|++.||++++.++
T Consensus 197 ~Lt~~G~~QA~~l~~~l~~~--------------~-~~--d-~i~sSpl~Ra~qTA~~i~~~~ 241 (372)
T PRK07238 197 ELTEVGRRQAAAAARYLAAR--------------G-GI--D-AVVSSPLQRARDTAAAAAKAL 241 (372)
T ss_pred CcCHHHHHHHHHHHHHHhcc--------------C-CC--C-EEEECChHHHHHHHHHHHHhc
Confidence 69999999999999999841 0 11 2 599999999999999998754
|
|
| >PRK10848 phosphohistidine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.24 Score=51.12 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=37.8
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+. .++ .=| .||||+=.|++.||+++++.+
T Consensus 22 pLt~~G~~qa~~~~~~l~~---------~~~-------~~d-~i~sSp~~Ra~qTa~~l~~~~ 67 (159)
T PRK10848 22 PLTTCGCDESRLMANWLKG---------QKV-------DIE-RVLVSPYLRAEQTLEVVGECL 67 (159)
T ss_pred CcCHHHHHHHHHHHHHHHh---------CCC-------CCC-EEEECCHHHHHHHHHHHHHHh
Confidence 6999999999999999983 111 002 499999999999999998765
|
|
| >PRK14119 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.22 Score=53.76 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=37.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+. .+. .+ | .||||+=.|++.||+++++.+
T Consensus 27 pLt~~G~~QA~~l~~~L~~---------~~~-----~~--d-~i~sSpL~Ra~~TA~~i~~~~ 72 (228)
T PRK14119 27 NLSEQGINEATRAGEKVRE---------NNI-----AI--D-VAFTSLLTRALDTTHYILTES 72 (228)
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-----CC--C-EEEeCccHHHHHHHHHHHHhc
Confidence 5999999999999999883 010 11 2 599999999999999998653
|
|
| >KOG1382|consensus | Back alignment and domain information |
|---|
Probab=92.01 E-value=1.4 Score=53.18 Aligned_cols=62 Identities=29% Similarity=0.329 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccCCcCceeeeee
Q psy10158 528 PAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMV 602 (1266)
Q Consensus 528 haGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEgeLtPIlVslV 602 (1266)
..||+-|.++||.|=.+|-. +-|.+ -.-|+++.--||..||++||-||.+-.+-.-| ++.++
T Consensus 135 ~~g~~~a~R~~r~f~~~y~~---------~~n~~---~y~i~tt~~~R~~dSA~~F~~GLfg~~~~~~t-~~~~~ 196 (467)
T KOG1382|consen 135 DEGRMLAKRLARRFPALYYE---------LENPT---VYNINTTASQRVVDSAQAFAYGLFGEDHFNIT-LQTVS 196 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHh---------hcCCc---eEEeeccchHHHHHHHHHHHhhhccccccCCC-ceeee
Confidence 78999999999999754410 01111 23488999999999999999999975565555 54444
|
|
| >PRK14117 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.25 Score=53.65 Aligned_cols=44 Identities=25% Similarity=0.352 Sum_probs=35.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAK 585 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAk 585 (1266)
.||..|+.||+.+|+.|+. .++ .+ | .||||+=+|++.||++.+.
T Consensus 27 ~Lt~~G~~qa~~~~~~l~~---------~~~-----~~--~-~i~sSpl~Ra~~TA~~i~~ 70 (230)
T PRK14117 27 DLSEKGTQQAIDAGKLIKE---------AGI-----EF--D-LAFTSVLKRAIKTTNLALE 70 (230)
T ss_pred CcCHHHHHHHHHHHHHHHH---------cCC-----CC--C-EEEECCcHHHHHHHHHHHH
Confidence 5899999999999999983 011 01 2 4999999999999998764
|
|
| >PRK14120 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.27 Score=54.44 Aligned_cols=45 Identities=27% Similarity=0.270 Sum_probs=36.6
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.|+. .+ ++-| .||||+=.|++.||++++..
T Consensus 30 pLTe~G~~QA~~~a~~l~~---------~~-------~~~~-~IysSpl~Ra~qTA~~i~~~ 74 (249)
T PRK14120 30 DLTEKGEAEAKRGGELLAE---------AG-------VLPD-VVYTSLLRRAIRTANLALDA 74 (249)
T ss_pred CcCHHHHHHHHHHHHHHHh---------cC-------CCCC-EEEecChHHHHHHHHHHHHh
Confidence 6999999999999999983 11 1112 59999999999999998764
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.32 Score=60.47 Aligned_cols=46 Identities=24% Similarity=0.239 Sum_probs=37.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.||+.|+... .+ +...||||+-.||+.||++|++.
T Consensus 443 pLt~~G~~qA~~l~~~l~~~~---------------~~-~~~~V~sSpl~Ra~~TA~~i~~~ 488 (664)
T PTZ00322 443 RLTERGRAYSRALFEYFQKEI---------------ST-TSFTVMSSCAKRCTETVHYFAEE 488 (664)
T ss_pred ccCHHHHHHHHHHHHHHHhcc---------------CC-CCcEEEcCCcHHHHHHHHHHHhc
Confidence 699999999999999998410 01 24589999999999999999764
|
|
| >PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis | Back alignment and domain information |
|---|
Probab=89.26 E-value=0.54 Score=49.79 Aligned_cols=148 Identities=24% Similarity=0.352 Sum_probs=71.2
Q ss_pred HHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccc-cCcceEEEeccCCCCchhhhhcccCCcc
Q psy10158 147 LEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSA-EDHNIYIYYPTSAGGGSQRLFRKIGSRS 225 (1266)
Q Consensus 147 L~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~G-edHNI~IYyp~s~GgGv~~LfrKignkS 225 (1266)
|++.|||+|.+..+.... +....+ ..|..|+|.|+..| - .|.|.. +.+..
T Consensus 1 l~~~gip~~~~~~i~~~~---------~l~~a~----~~iG~P~vlK~~~~GY-----------DGkGq~-~i~~~---- 51 (172)
T PF02222_consen 1 LDELGIPTAPYATIDSLE---------DLEEAA----ESIGFPAVLKTRRGGY-----------DGKGQF-VIRSE---- 51 (172)
T ss_dssp HHHTT--B-EEEEESSHH---------HHHHHH----HHHTSSEEEEESSSSC-----------TTTTEE-EESSG----
T ss_pred CcccCCCCCCeEEECCHH---------HHHHHH----HHcCCCEEEEccCcCc-----------CCCccE-EECCH----
Confidence 789999999999996521 111111 12349999996665 4 377864 33321
Q ss_pred ccccCCc-ccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCH----HHHHHH
Q psy10158 226 SVYSPES-RVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSN----AEKLIS 300 (1266)
Q Consensus 226 S~y~p~s-~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~----eEK~IA 300 (1266)
+....-. .+ ..+.+|.|+||+- -..|=|.++-.. .-+.+-=|++. -+.+|-.-...-.|..+++ +=++||
T Consensus 52 ~dl~~a~~~~-~~~~~ilE~~v~f-~~EiSvivaR~~--~G~~~~yp~~e-n~~~~~il~~s~~Pa~i~~~~~~~a~~ia 126 (172)
T PF02222_consen 52 EDLEKAWQEL-GGGPCILEEFVPF-DREISVIVARDQ--DGEIRFYPPVE-NVHRDGILHESIAPARISDEVEEEAKEIA 126 (172)
T ss_dssp GGHHHHHHHT-TTSCEEEEE---E-SEEEEEEEEEET--TSEEEEEEEEE-EEEETTEEEEEEESCSS-HHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCcEEEEeccCC-cEEEEEEEEEcC--CCCEEEEcCce-EEEECCEEEEEECCCCCCHHHHHHHHHHH
Confidence 1111000 11 6899999999983 222333322110 00111111110 0111111134455666665 445678
Q ss_pred HHHHHHhCC-ccceeeEEeeC-CC-eEEEee
Q psy10158 301 RKVCLAFKQ-TVCGFDLLRAN-GK-SFVCDV 328 (1266)
Q Consensus 301 ~kaakAFGq-~VCGfDLLRs~-gg-syVcDV 328 (1266)
.+|+.+++- .|-+|.+.-.. |. -||=|+
T Consensus 127 ~~i~~~l~~vGv~~VE~Fv~~~g~~v~vNEi 157 (172)
T PF02222_consen 127 RKIAEALDYVGVLAVEFFVTKDGDEVLVNEI 157 (172)
T ss_dssp HHHHHHHTSSEEEEEEEEEETTSTEEEEEEE
T ss_pred HHHHHHcCcEEEEEEEEEEecCCCEEEEEec
Confidence 888888864 46667777774 43 566554
|
This family does not contain all known ATP-grasp domain members. All the enzymes of this family possess ATP-dependent carboxylate-amine ligase activity, and their catalytic mechanisms are likely to include acylphosphate intermediates.; PDB: 3K5H_C 3K5I_C 3AX6_A 3Q2O_B 3QFF_B 3R5H_A 3ORQ_B 3ORR_B 4E4T_B 2Z04_A .... |
| >COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.60 E-value=0.72 Score=48.92 Aligned_cols=47 Identities=28% Similarity=0.219 Sum_probs=40.3
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLL 588 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL 588 (1266)
.||..|++||+-.|+.++. .|+ +.=+|++|.-.|+|.||++++..|.
T Consensus 25 ~Lt~~G~~ea~~~a~~L~~---------~~~--------~~D~VL~Spa~Ra~QTae~v~~~~~ 71 (163)
T COG2062 25 PLTERGRKEAELVAAWLAG---------QGV--------EPDLVLVSPAVRARQTAEIVAEHLG 71 (163)
T ss_pred cCCHHHHHHHHHHHHHHHh---------cCC--------CCCEEEeChhHHHHHHHHHHHHhhC
Confidence 5999999999999999994 222 2345999999999999999999988
|
|
| >KOG0235|consensus | Back alignment and domain information |
|---|
Probab=86.61 E-value=0.85 Score=50.29 Aligned_cols=47 Identities=28% Similarity=0.299 Sum_probs=40.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLL 588 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL 588 (1266)
.||..|+.||+.+|++.+. ..+-.|+= |||+=.|++.||+.+++.+=
T Consensus 31 ~Lte~G~~qA~~~~~~l~~----------------~~~~~~~~-~tS~l~RakqT~~~il~~~~ 77 (214)
T KOG0235|consen 31 PLTEKGEEQAKAAAQRLKD----------------LNIEFDVC-YTSDLKRAKQTAELILEELK 77 (214)
T ss_pred ccChhhHHHHHHHHHHHHh----------------cCCcccEE-ecCHHHHHHHHHHHHHHhhc
Confidence 7999999999999998883 44555765 99999999999999988665
|
|
| >PRK06193 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.36 E-value=1.2 Score=48.72 Aligned_cols=43 Identities=33% Similarity=0.382 Sum_probs=35.4
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFA 584 (1266)
.||+.|+.||+.+|+.|+. .++ .=| .||||+=.|++.||+++.
T Consensus 73 pLt~~G~~qA~~l~~~L~~---------~~~-------~~d-~V~sSpl~Ra~qTA~il~ 115 (206)
T PRK06193 73 NLSEEGREQARAIGEAFRA---------LAI-------PVG-KVISSPYCRAWETAQLAF 115 (206)
T ss_pred CCCHHHHHHHHHHHHHHHh---------cCC-------CCC-EEEECCcHHHHHHHHHHh
Confidence 6899999999999999984 121 124 499999999999999864
|
|
| >COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.02 E-value=3.3 Score=49.77 Aligned_cols=209 Identities=18% Similarity=0.277 Sum_probs=129.0
Q ss_pred HHHHHHhhcCcEEEEEecccccc-cccccccccceeeccccCCCcH---HHHHHHHhhcCCccccCccchhhhhHHHHHH
Q psy10158 69 EILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCLISFHSKGFPL---EKAIKYANLRKPFVINNLNMQYDIQDRRKVY 144 (1266)
Q Consensus 69 ~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP~cD~LIsFfS~GfPL---~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vl 144 (1266)
+=|-++.+...+|++|-|-+.-| .-|- |. |-..|+|. .|+-+..+ ++|.-+=
T Consensus 53 ~~lv~fA~~~~idl~vVGPE~pL~~Gvv-----D~---l~~~Gi~vFGPsk~AA~lE----------------~SK~faK 108 (428)
T COG0151 53 EALVAFAKEKNVDLVVVGPEAPLVAGVV-----DA---LRAAGIPVFGPTKAAAQLE----------------GSKAFAK 108 (428)
T ss_pred HHHHHHHHHcCCCEEEECCcHHHhhhhH-----HH---HHHCCCceeCcCHHHHHHH----------------hhHHHHH
Confidence 34556666678999999988877 6554 33 33677777 45544443 6788888
Q ss_pred HHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCc
Q psy10158 145 ALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSR 224 (1266)
Q Consensus 145 qiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignk 224 (1266)
.+++++|||++.+-..+. ..+..+||.--| .|+|+|| +|- .+|.||. +...+.-.
T Consensus 109 ~fm~k~~IPta~y~~f~~---------~e~a~ayi~~~g----~piVVKa-dGL----------aaGKGV~-V~~~~eeA 163 (428)
T COG0151 109 DFMKKYGIPTAEYEVFTD---------PEEAKAYIDEKG----APIVVKA-DGL----------AAGKGVI-VAMTLEEA 163 (428)
T ss_pred HHHHHcCCCcccccccCC---------HHHHHHHHHHcC----CCEEEec-ccc----------cCCCCeE-EcCCHHHH
Confidence 999999999999877763 234566775555 9999999 442 1578885 44432100
Q ss_pred cccccCCcccc------cCcceEEeeccCCCCceEEEEEECCceeE---EeeccCCCCCCceeecCCCCceeeEee-CCH
Q psy10158 225 SSVYSPESRVR------KSGSFIYEDFMPTDGTDVKVYTVGPDYAH---AEARKSPALDGKVERDSEGKEIRYPVI-LSN 294 (1266)
Q Consensus 225 SS~y~p~s~vr------~~gSyIYEEFI~t~GtDVKVYtVGp~~vh---Ae~RKSPvvDG~VRRN~hgKEiRypV~-LT~ 294 (1266)
-. +. +..+. .....+.|||+.-.---+=|+|=|.+++- |---|= +.||+-=-|+-|=|.=.|+. +|+
T Consensus 164 ~~-a~-~~~l~~~~fg~~g~~VVIEEfL~GeE~S~~a~~DG~~v~p~p~aQDhKr-a~dgD~GPNTGGMGaysp~P~~t~ 240 (428)
T COG0151 164 EA-AV-DEMLEGNAFGSAGARVVIEEFLDGEEFSLQAFVDGKTVIPMPTAQDHKR-AYDGDTGPNTGGMGAYSPAPFITD 240 (428)
T ss_pred HH-HH-HHHHhhccccCCCCcEEEEecccceEEEEEEEEcCCeEEECcccccccc-ccCCCCCCCCCCCCCCCCCCCCCH
Confidence 00 00 00111 12468999999844455666666666432 111111 24888888888877666554 455
Q ss_pred HHH-----HHHHHHHHHhC---Ccccee---eEEeeCCCeEEEeec
Q psy10158 295 AEK-----LISRKVCLAFK---QTVCGF---DLLRANGKSFVCDVN 329 (1266)
Q Consensus 295 eEK-----~IA~kaakAFG---q~VCGf---DLLRs~ggsyVcDVN 329 (1266)
+.- +|-..+.+++. -..+|| =|+-+..||+|+|-|
T Consensus 241 e~~~~~~~~Iv~ptv~gm~~EG~~f~GvLy~glMlt~~GPkViEfN 286 (428)
T COG0151 241 EVVERAVEEIVEPTVEGMAKEGYPFRGVLYAGLMLTADGPKVIEFN 286 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceEEEEeEEEEcCCCcEEEEEe
Confidence 533 33344555554 457787 223356779999999
|
|
| >PF03133 TTL: Tubulin-tyrosine ligase family; InterPro: IPR004344 Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed | Back alignment and domain information |
|---|
Probab=80.46 E-value=1 Score=49.96 Aligned_cols=54 Identities=22% Similarity=0.498 Sum_probs=28.8
Q ss_pred CEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCC----CC--ceEEEEEEC
Q psy10158 189 PFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPT----DG--TDVKVYTVG 259 (1266)
Q Consensus 189 PfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t----~G--tDVKVYtVG 259 (1266)
-+|.||..|. +|.|. +|++... +.. .......+.||.|+||+. +| -|||+||+=
T Consensus 67 ~wI~KP~~~~-----------rG~GI-~l~~~~~----~i~-~~~~~~~~~~vvQkYI~~PlLi~grKFDlR~yvlv 126 (292)
T PF03133_consen 67 LWIVKPSNGS-----------RGRGI-KLFNNLE----QIL-RFSKNKNQPYVVQKYIENPLLIDGRKFDLRVYVLV 126 (292)
T ss_dssp -EEEEES------------------E-EEES-HH----HHH-CCHCCTTS-EEEEE--SSB--BTTB-EEEEEEEEE
T ss_pred EEEEeccccC-----------CCCCc-eecCCHH----HHH-HHhhhhhhhhhhhhccCCCeEEeeeeEEEEEEEEE
Confidence 4888888886 68887 4887532 000 002347899999999973 88 899999873
|
This modification cycle involves a specific carboxypeptidase and the activity of the tubulin-tyrosine ligase (TTL) []. Tubulin-tyrosine ligase (TTL) catalyses the ATP-dependent post-translational addition of a tyrosine to the carboxy terminal end of detyrosinated alpha-tubulin. The true physiological function of TTL has so far not been established. In normally cycling cells, the tyrosinated form of tubulin predominates. However, in breast cancer cells, the detyrosinated form frequently predominates, with a correlation to tumour aggressiveness []. 3-nitrotyrosine has been shown to be incorporated, by TTL, into the carboxy terminal end of detyrosinated alpha-tubulin. This reaction is not reversible by the carboxypeptidase enzyme. Cells cultured in 3-nitrotyrosine rich medium showed evidence of altered microtubule structure and function, including altered cell morphology, epithelial barrier dysfunction, and apoptosis [].; GO: 0004835 tubulin-tyrosine ligase activity, 0006464 protein modification process; PDB: 3TII_A 3TIN_A 3TIG_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1266 | ||||
| 3t7a_A | 330 | Crystal Structure Of The Catalytic Domain Of Human | 1e-152 | ||
| 3t54_A | 334 | Crystal Structure Of The Catalytic Domain Of Human | 1e-152 |
| >pdb|3T7A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Adp At Ph 5.2 Length = 330 | Back alignment and structure |
|
| >pdb|3T54|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Atp And Cadmium Length = 334 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1266 | |||
| 3t7a_A | 330 | Inositol pyrophosphate kinase; ATP-grAsp fold, tra | 1e-178 | |
| 1z2n_X | 324 | Inositol 1,3,4-trisphosphate 5/6-kinase; inositol | 1e-34 | |
| 2q7d_A | 346 | Inositol-tetrakisphosphate 1-kinase; inositol kina | 7e-29 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 | |
| 2gfi_A | 458 | Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces | 1e-08 | |
| 1uc8_A | 280 | LYSX, lysine biosynthesis enzyme; alpha-aminoadipa | 7e-08 | |
| 1qfx_A | 460 | Protein (PH 2.5 acid phosphatase); phosphomonoeste | 5e-05 | |
| 3ntl_A | 398 | Acid glucose-1-phosphate phosphatase; histidine ac | 9e-05 | |
| 2wnh_A | 418 | 3-phytase; histidine acid phosphatase, hydrolase; | 1e-04 | |
| 1qwo_A | 442 | Phytase; alpha barrel, beta sandwich, orthogonal b | 2e-04 | |
| 3k4q_A | 444 | 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hex | 2e-04 | |
| 1dkq_A | 410 | Phytase; histidine acid phosphatase fold, hydrolas | 2e-04 | |
| 1nd6_A | 354 | Prostatic acid phosphatase; PAP, prostate, phospha | 5e-04 |
| >3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 3t54_A* 3t99_A* Length = 330 | Back alignment and structure |
|---|
Score = 526 bits (1357), Expect = e-178
Identities = 248/329 (75%), Positives = 291/329 (88%), Gaps = 1/329 (0%)
Query: 45 CEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCL 103
+Q++VG+C+MAKKS+SKPMKEIL R+ F++I ++VF EE I +PV+ WP+ DCL
Sbjct: 2 SFTERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCL 61
Query: 104 ISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRE 163
ISFHSKGFPL+KA+ YA LR PFVIN+LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+
Sbjct: 62 ISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRD 121
Query: 164 SPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGS 223
+P + L+E EDHVEVNG VF KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGS
Sbjct: 122 PNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGS 181
Query: 224 RSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 283
RSSVYSPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG
Sbjct: 182 RSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 241
Query: 284 KEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDD 343
KE+RYPVIL+ EKLI+ KVCLAFKQTVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD
Sbjct: 242 KEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDD 301
Query: 344 SAKILGNMILRELAPTLHIPWSVPFQLDD 372
AKILGN+++RELAP HIPWS+P + +D
Sbjct: 302 CAKILGNIVMRELAPQFHIPWSIPLEAED 330
|
| >1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Length = 324 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 1e-34
Identities = 47/333 (14%), Positives = 95/333 (28%), Gaps = 82/333 (24%)
Query: 43 PCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDC 102
+ V + + K + ++ +F + + T+ + +
Sbjct: 4 GSMTTKQTVSLFIWLPESKQK----TLFISTKNHTQFELNNIIFDVTLSTELPDKEPNAI 59
Query: 103 LISF-HSKGFPLEKAIKYANLRKPF-VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVL 160
+ H G ++ KY + + + + R ++ ALL K I IP +
Sbjct: 60 ITKRTHPVGKMADEMRKYEKDHPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFSV 119
Query: 161 DRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPV----SAEDHNIYIYYPTSAGGGSQR 216
+ E ++ ++ PF+ KP + H + I
Sbjct: 120 KSKE---------EVIQLLQSKQLIL--PFIVKPENAQGTFNAHQMKI------------ 156
Query: 217 LFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKS------ 270
V E + + ++ + VKV+ +G + + R S
Sbjct: 157 ----------VLEQEGIDDIHFPCLCQHYINHNNKIVKVFCIG-NTLKWQTRTSLPNVHR 205
Query: 271 -------------------PALDGKVERDSEGKEIRYPVILSNAE-----------KLIS 300
P + E R+ + + ++
Sbjct: 206 CGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPILLNLTSEAEMRDLA 265
Query: 301 RKVCLAFKQTVCGFDLLRAN--GKSFVCDVNGF 331
KV A +CG D ++ N G V DVN F
Sbjct: 266 YKVRCALGVQLCGIDFIKENEQGNPLVVDVNVF 298
|
| >2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Length = 346 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 7e-29
Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 59/342 (17%)
Query: 53 VGVCAMAKKSQSKPMKEILTRLEE--FEFIKMIVFSEETIQKPVD------EWPIVDCLI 104
VG KK + + + E +++ + Q P+D I++
Sbjct: 21 VGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEADQ 80
Query: 105 SFHSKGFPLEKAIKYANLRKPF-VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRE 163
+ + + +Y + V++ L + DR K Y L+ K + +
Sbjct: 81 NDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPP 140
Query: 164 SPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAED---HNIYIYYPTSAGGGSQRLFRK 220
+ ++ +E NG+ F PF+ K A H + I
Sbjct: 141 FMELTSLCGDDTMRLLEKNGLTF--PFICKTRVAHGTNSHEMAI---------------- 182
Query: 221 IGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALD------ 274
V++ E + ++F+ + KV+ VG Y +
Sbjct: 183 ------VFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDR 236
Query: 275 -------------GKVERDSEGKEIRYPVILSNAEKL--ISRKVCLAFKQTVCGFDLLRA 319
+E +I + E + +SR + A ++ G D++
Sbjct: 237 ESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIIN 296
Query: 320 N--GKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPT 359
N G+ V D+N F + ++++ D + ++ +
Sbjct: 297 NQTGQHAVIDINAFPGYEGVSEFFTDLLNHIATVLQGQSTAM 338
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 72.6 bits (177), Expect = 7e-13
Identities = 95/650 (14%), Positives = 185/650 (28%), Gaps = 190/650 (29%)
Query: 241 IYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLIS 300
I F + V D + + E I ++ +A
Sbjct: 21 ILSVFEDAFVDNFDCKDV-QDMPKS-----------ILSKEEIDHI---IMSKDAVSGTL 65
Query: 301 RKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNS-NKYYD-DSAKILGNMILRELAP 358
R L F L + + V FV+ Y + I +
Sbjct: 66 R---L--------FWTLLSKQEEMV-----QKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 359 TLHIPWSVPFQLDDPPFVPTTFG----------KMMELRCVVAVIRHGDR-TPKQKMKVE 407
++I D+ F ++ELR V+ G + K + ++
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169
Query: 408 V-----RHPKF-FEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNS---ADPE 458
V K F+IF+ + LK + VL++ + LL +I+ N +D
Sbjct: 170 VCLSYKVQCKMDFKIFW---------LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 459 IEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVL 518
K ++ ++ L +K +P L L
Sbjct: 221 SNIKL-RIHSIQAELRRL-----------LKSKPYEN-------------------CL-L 248
Query: 519 ILK--WGGELTPAGRIQAEEL-----GRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYAS 571
+L + A + + L +V + H + H
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL--------SAATTTHISLDHHSMTLTP 300
Query: 572 DEGRVQMTAAAFAKGLLALEGEL-------TPILVQMVKSANTNGL--LDN--DSDASKH 620
DE + K L +L P + ++ + +GL DN + K
Sbjct: 301 DE-----VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 621 QNIVKAKLHDL---LQRDR-----TFTPEDRDKVN-PCNATSI-------NIAMDFVKNP 664
I+++ L+ L R F P + P S+ + M V
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVF-PPS---AHIPTILLSLIWFDVIKSDVMVVVN-- 409
Query: 665 VQCCKR-----------IHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIE 713
+ K I I + ++ KLE+ S+ ++
Sbjct: 410 -KLHKYSLVEKQPKESTIS--IPSIYLELKVKLENEYALHRSI---------------VD 451
Query: 714 KDFCMKNYKY-DISKIPD---IYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQE 769
K + D+ Y I + L++ +H + ++L+ +++ +
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS 511
Query: 770 YGMTMSEKL--TISQ------GICV--PLLKKIRADLQRNVEESEENVNR 809
S + T+ Q IC P +++ + + + EEN+
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLIC 561
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.1 bits (155), Expect = 3e-10
Identities = 96/640 (15%), Positives = 191/640 (29%), Gaps = 202/640 (31%)
Query: 429 KLKKPKQLQEVLDIARMLLT--EIEN--NSADPE---------IEEKQGKLEQ--LKGVL 473
++V D+ + +L+ EI++ S D + KQ ++ Q ++ VL
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 474 EM-YGHFSGINRKVQMKYQPKGRPRGSSSDEEEED-------------VCKPKEPSLVLI 519
+ Y +K + + + E+ D V + + L
Sbjct: 88 RINYKFLMS-----PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ---PYLK 139
Query: 520 LK-WGGELTPAGRIQAEELGRVFRCMYPGGQG------NGLGLLRLHSTFRHDLKIY--- 569
L+ EL PA + + G + G G + ++ D KI+
Sbjct: 140 LRQALLELRPAKNVLID--G-----V--LGSGKTWVALDVCLSYKVQCKM--DFKIFWLN 188
Query: 570 ----ASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVK 625
S E ++M L L ++ P N D+ S+ + ++
Sbjct: 189 LKNCNSPETVLEM--------LQKLLYQIDP---------NWTSRSDHSSNIKLRIHSIQ 231
Query: 626 AKLHDLLQRDRTFTPEDR-----DKVNPCNATSINIAMDFVKNPVQCCK-----RIHELI 675
A+L LL+ P + V NA + N A + CK R ++
Sbjct: 232 AELRRLLKS----KPYENCLLVLLNV--QNAKAWN-AFNLS------CKILLTTRFKQVT 278
Query: 676 HVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIE---------------------- 713
L + +L E L+ ++
Sbjct: 279 DFLSAATTTHISLDH-HSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRLSIIAES 336
Query: 714 -KDFCM--KNYK-YDISKIPDIYDCIKYDLQHNQHTVQFDQAE--ELYLN-AKYMADIVI 766
+D N+K + K+ I I+ L + AE +++ + + I
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTI---IESSLN------VLEPAEYRKMFDRLSVFPPSAHI 387
Query: 767 PQE------YGMTMSEKLTISQGICVP-LLKKIRA-------DLQRNVEESEENV----N 808
P + + S+ + + + L++K + ++ EN
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447
Query: 809 RLNPQYSHGVSSPGRHV---RTRLYFTSESHI--HSLLTVLRYGGLTESVHMN-----DE 858
+ Y+ + + YF S HI H L+ E + + D
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYS--HIGHH-----LKNIEHPERMTLFRMVFLDF 500
Query: 859 QWMRA------MEYVSMVSELNYMSQVVIMLYED--PTKDPTSDERFHIELHFSPGVNCC 910
+++ + + S LN + Q + Y+ DP + + L F P +
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQ--LKFYKPYICDNDPKYERLVNAILDFLPKIE-- 556
Query: 911 VQKNLPPGPGFRPHSRNDQKKNLPRID-QEDTEFYSTDAE 949
+ + +L RI + E +A
Sbjct: 557 ------------ENLICSKYTDLLRIALMAEDEAIFEEAH 584
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 1e-07
Identities = 61/381 (16%), Positives = 122/381 (32%), Gaps = 97/381 (25%)
Query: 658 MDFVKNPVQ-CCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDF 716
MDF Q K I L +++ CK+ ++ SK E D
Sbjct: 7 MDFETGEHQYQYKDI------LSVFEDAFVDNFDCKDVQ-------DMPKSILSKEEIDH 53
Query: 717 CMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSE 776
+ + K +S ++ + L + VQ E L +N K++ + ++ +M
Sbjct: 54 IIMS-KDAVSGTLRLFWTL---LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 777 KLTISQGICVPLLKKIRADLQRNVEE-SEENVNRLNPQYSHGVSSPGRHVRTRLYFTSES 835
++ I Q R L + + ++ NV+RL P +R L E
Sbjct: 110 RMYIEQ----------RDRLYNDNQVFAKYNVSRLQPYLK---------LRQALL---EL 147
Query: 836 HIHSLLTVLRYG--G-----LTESVHMNDEQWMRAME----YVSMVSELNYMSQVVIMLY 884
+ + G G + V + M+ ++++ N V+ ML
Sbjct: 148 RPAKNVLI--DGVLGSGKTWVALDV-CLSYKVQCKMDFKIFWLNL-KNCNSPETVLEML- 202
Query: 885 EDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNL------PR--- 935
++ P N + + R HS + + L
Sbjct: 203 ----------QKLL--YQIDP--NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 936 I--DQEDTEFYSTDAEDN------TGSSKSTSDQDSPTSAEGPSVDQSKGKF-------V 980
+ + ++ + + +A + T K +D S + S+D +
Sbjct: 249 VLLNVQNAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 981 LSQPIPITVKDLKRKNSVGDP 1001
L + + +DL R+ +P
Sbjct: 307 LLKYLDCRPQDLPREVLTTNP 327
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-05
Identities = 75/565 (13%), Positives = 147/565 (26%), Gaps = 174/565 (30%)
Query: 740 QHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQ-R 798
H+ H + F+ E Y ++ + +
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSV------------------------FEDAFVDNFDCK 36
Query: 799 NVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDE 858
+V++ +++ + H + S T F T+L E V
Sbjct: 37 DVQDMPKSILS-KEEIDHIIMSKDAVSGTLRLFW---------TLLSKQ--EEMVQ---- 80
Query: 859 QWMRAMEYVSMVSELNY---MSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNL 915
++V V +NY MS + + P+ R +IE +
Sbjct: 81 ------KFVEEVLRINYKFLMSP-----IKTEQRQPSMMTRMYIE---------QRDRLY 120
Query: 916 PPGPGFRPHSRNDQKKNLPRIDQED---TEFYSTDAEDN------TGSSKSTSDQDSPTS 966
F + N+ R+ N GS K+ +
Sbjct: 121 NDNQVFAKY-------NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW------VA 167
Query: 967 AEGPSVDQSKGKFVLSQPIPI---TVKDLKRKNSVGDP----C----PSIVAPEGHPYRR 1015
+ V S K I +K+ +V + P+ + H
Sbjct: 168 LD---VCLSY-KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 1016 PRSPNE-EQRSRSYDQQHQRPKG--------ASKCCE---GNCR-----HRHSISGQMCY 1058
+ + R + +K +C+ ++ +
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD---F 280
Query: 1059 LKNSTGYGFR---RGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGV 1115
L +T + L+ SL + +L + TTN L
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYL---DCRPQDLPREV-LTTNPRRLSIIA-- 334
Query: 1116 PSIRPLETLHNALSLKHLDNFL----GKMIRVIPSKTPASSPPKY-----------PSTP 1160
E++ + L+ DN+ K+ +I S P +Y PS
Sbjct: 335 ------ESIRDGLA--TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 1161 I-EHSLSGARLGWSGPPSFVSESGPSSPNALSDYFFKSGLNTSDSCSSEFSSSRSSVPSS 1219
I LS + W + + K L S S+PS
Sbjct: 387 IPTILLS--LI-WFDVIKSDVMV-------VVNKLHKYSLVEKQPK-----ESTISIPSI 431
Query: 1220 EVDIRDPGGDVTPMSDMDHDVTVVE 1244
++++ + + H ++V+
Sbjct: 432 YLELKVKLENEYAL----HR-SIVD 451
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 5e-05
Identities = 89/693 (12%), Positives = 195/693 (28%), Gaps = 200/693 (28%)
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
+ + + +++ L + E+ + V + + ++ + S E P
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQ-----P- 105
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE--SRVRKSGSFIYEDFMPT 248
+ +YI +Q +F K +V + ++R++ + E
Sbjct: 106 ------SMMTRMYIEQRDRLYNDNQ-VFAKY----NVSRLQPYLKLRQA---LLEL---R 148
Query: 249 DGTDVKVYTV---GPDYAHAEARKSPALDGKVERDSEGKEIR-YPVILSNAEKLISRKVC 304
+V + V G K+ + V + + + + N + S +
Sbjct: 149 PAKNVLIDGVLGSG---------KT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198
Query: 305 LAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYD--DSAKILGNMIL--RELAPTL 360
L Q + + D N S +S+ S + +L + L
Sbjct: 199 LEMLQKLL-----------YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 361 HIPWSVPFQLDDPPFV--PTTFGKMMELRCVVAVI-RHGDRT-----PKQKMKVEVRHPK 412
+ L + V + L C + + R T H
Sbjct: 248 LV-------LLN---VQNAKAW-NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 413 FF------EIFYKYGGQNDGHVKLKKPKQL-QEVLDIARMLLTEI-ENNSADPEIEE--K 462
+ KY +P+ L +EVL L+ I E+ + K
Sbjct: 297 TLTPDEVKSLLLKYLDC--------RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 463 QGKLEQLKGVLEM-YGHFS-GINRKVQMKYQ-----PKGRPRGSSSDEEEEDVCKPKEPS 515
++L ++E RK+ + P P+
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKM---FDRLSVFP-------------PSA---HIPT 389
Query: 516 LVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGR 575
++L L W + + +L + + + + S + +LK+ +
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHK--YSLVEKQPKE--STISIPSIYL-ELKVKLEN--- 441
Query: 576 VQMTAAAFAKGLLALEGELTPILV---QMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
E L +V + K+ +++ L+ D + +I H L
Sbjct: 442 ---------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG----HHLK 482
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
+ +R + + +DF +++K+
Sbjct: 483 NIEHP----ERMTLFR------MVFLDF-------------------RFLEQKIR----- 508
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
+ +W G + ++ K YK I Y+ + + + E
Sbjct: 509 ----HDSTAWNASGSILNTLQ-QL--KFYKPYICDNDPKYERLVNAILDFLP-----KIE 556
Query: 753 ELYLNAKYMADIV---IPQEYGMTMSEKLTISQ 782
E + +KY D++ + E E Q
Sbjct: 557 ENLICSKYT-DLLRIALMAEDEAIFEEAHKQVQ 588
|
| >2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii} Length = 458 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 1e-08
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582
+ AG A + G FR Y L + T ++ S+ GRV T+
Sbjct: 126 NSDSIYAGTTDAMKHGIAFRTKYG-------ELFDTNDTLP----VFTSNSGRVYQTSQY 174
Query: 583 FAKGLLALEGELTPILVQMV---KSANTNGLLDND 614
FA+G + + + ++ N L D
Sbjct: 175 FARGFMGDDFSNDTVKTNIISEDADMGANSLTPRD 209
|
| >1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 7e-08
Identities = 41/213 (19%), Positives = 64/213 (30%), Gaps = 41/213 (19%)
Query: 126 FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIV 185
V+N + D+ L K G+ P+ A+ + L+E+
Sbjct: 75 PVVNRPEVIEACGDKWATSVALAKAGLPQPKTALA--TDREEAL-RLMEA---------- 121
Query: 186 FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-RVRKSGSFIYED 244
F P V KPV S G E + F ++
Sbjct: 122 FGYPVVLKPVI-----------GSWGRLLAXXXXXXXXXXXXXXKEVLGGFQHQLFYIQE 170
Query: 245 FMPTDGTDVKVYTVGPDYAHAEARKS------PALDGKVERDSEGKEIRYPVILSNAEKL 298
++ G D++V+ VG A R+S A G+ E L+
Sbjct: 171 YVEKPGRDIRVFVVGERAIAAIYRRSAHWITNTARGGQAE----------NCPLTEEVAR 220
Query: 299 ISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGF 331
+S K A V DL + V +VN
Sbjct: 221 LSVKAAEAVGGGVVAVDLFESERGLLVNEVNHT 253
|
| >1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2 Length = 460 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 5e-05
Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 18/125 (14%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
AG + A G ++ Y L + ++S GRV TA F
Sbjct: 116 TSGPYAGLLDAYNHGNDYKARYGH-------LWNGETVVP----FFSSGYGRVIETARKF 164
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLL-------DNDSDASKHQNIVKAKLHDLLQRDR 636
+G L + +S DND + + R
Sbjct: 165 GEGFFGYNYSTNAALNIISESEVMGADSLTPTCDTDNDQTTCDNLTYQLPQFKVAAARLN 224
Query: 637 TFTPE 641
+ P
Sbjct: 225 SQNPG 229
|
| >3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A* Length = 398 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 9e-05
Identities = 48/326 (14%), Positives = 88/326 (26%), Gaps = 77/326 (23%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHD-LKIYASDEGRVQMTAAA 582
G+LT G + +G R G+++ D + YA+ R TA
Sbjct: 45 GQLTTKGGVLEVYMGHYMREWL-----AQQGMVKTGECPAADSVYAYANSLQRTVATAQF 99
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPED 642
F G ++ + D TF P
Sbjct: 100 FITGAF------------------------------PGCDVPVHHQEKMGTMDPTFNPVI 129
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGES- 701
D P AM+ + +Q + L + +S +
Sbjct: 130 TDNS-PEFREKALKAMETERQKMQLTESYKLLEQMTN-----------YADSPSCKEKKV 177
Query: 702 WELMGRRWS---KIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNA 758
L + + EK+ + + + D + Y Q E +
Sbjct: 178 CSLADAKDTFSADYEKEPGVSGPLKVGNSLVDAFTLQYY---EGFPADQVAWGEIKT-DQ 233
Query: 759 KYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGV 818
++ + Y ++ ++Q + PL+K I L
Sbjct: 234 QWRVLSKLKNGYQDSLFTSTEVAQNVAKPLVKYIDKTLV--------------------- 272
Query: 819 SSPGRHVRTRLYFTSESHIHSLLTVL 844
+ + + L +S+I SLLT L
Sbjct: 273 TEQAKAPKITLLVGHDSNIASLLTAL 298
|
| >2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A Length = 418 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 1e-04
Identities = 48/344 (13%), Positives = 91/344 (26%), Gaps = 70/344 (20%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
GELT G GR Y LGLL+ + + AS R + TA A
Sbjct: 54 GELTGHGYAAVVNKGREEGQHY-----RQLGLLQAGCPTAESIYVRASPLQRTRATAQAL 108
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDR 643
G + H + D F +
Sbjct: 109 VDGAFP------------------------GCGVAIH--------YANGDADPLFQTDKF 136
Query: 644 DKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWE 703
A + + + Q + + I +L+ + + + C
Sbjct: 137 AATQTDPARQLAAVKEKAGDLAQRRQALAPTIQLLKQAVCQADK--PCPIFDTPWRVEQS 194
Query: 704 LMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMAD 763
G+ +S + ++ + ++ N Q + ++ A
Sbjct: 195 KSGKTTIS------------GLSVMANMVETLRLGWSENLPLSQLAWGKIAQA-SQITAL 241
Query: 764 IVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEE------------------ 805
+ + E ++ L +Q LL + ++ +
Sbjct: 242 LPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEASPNVRWLLLVAHDTNIAMVRTLM 301
Query: 806 NVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGL 849
N + P YS G PG + + ++S L + GL
Sbjct: 302 NFSWQLPGYSRGNIPPGSSLVLERWRDAKSGERYLRVYFQAQGL 345
|
| >1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A* Length = 442 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 19/148 (12%)
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
+LTP G Q G F Y I AS RV +
Sbjct: 100 GADDLTPFGEQQLVNSGIKFYQRYK------------ALARSVVPFIRASGSDRVIASGE 147
Query: 582 AFAKGLLALEGELTPILVQMVKSANT----NGLLDNDSDASKHQNIVKAKLHDLLQRD-- 635
F +G + + + + + +N D ++L D + +
Sbjct: 148 KFIEGFQQAKLADPGATNRAAPAISVIIPESETFNNTLDHGVCTKFEASQLGDEVAANFT 207
Query: 636 RTFTPEDRDKVNPCNATSINIAMDFVKN 663
F P+ R + + + + + V +
Sbjct: 208 ALFAPDIRARAEK-HLPGVTLTDEDVVS 234
|
| >3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} PDB: 3k4p_A* 1ihp_A Length = 444 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
+LTP G + G F Y T I +S RV +
Sbjct: 101 GADDLTPFGEQELVNSGIKFYQRYE------------SLTRNIVPFIRSSGSSRVIASGK 148
Query: 582 AFAKGLLALEGE 593
F +G + + +
Sbjct: 149 KFIEGFQSTKLK 160
|
| >1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A Length = 410 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 2e-04
Identities = 43/325 (13%), Positives = 85/325 (26%), Gaps = 59/325 (18%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHD-LKIYASDEGRVQMTAAA 582
G LTP G LG R GLL + + I A + R + T A
Sbjct: 45 GWLTPRGGELIAYLGHYQRQRL-----VADGLLAKKGCPQSGQVAIIADVDERTRKTGEA 99
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTP-- 640
FA GL + Q S D F P
Sbjct: 100 FAAGL--APDCAITVHTQTDTS----------------------------SPDPLFNPLK 129
Query: 641 EDRDKVNPCNAT-SINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHG 699
+++ N T +I + L+ ++ ++ K
Sbjct: 130 TGVCQLDNANVTDAILSRAGG--SIADFTGHRQTAFRELERVLNFPQSNLCLKR--EKQD 185
Query: 700 ESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAK 759
ES L S+++ + +S + + + + + +
Sbjct: 186 ESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRI---TDSHQ 242
Query: 760 YMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVS 819
+ + + + +++ PLL I+ L + + + L
Sbjct: 243 WNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVL---- 298
Query: 820 SPGRHVRTRLYFTSESHIHSLLTVL 844
++++ +L L
Sbjct: 299 ---------FIAGHDTNLANLGGAL 314
|
| >1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A Length = 354 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 5e-04
Identities = 25/111 (22%), Positives = 34/111 (30%), Gaps = 16/111 (14%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
G+LT G Q ELG R Y S + I ++D R M+A
Sbjct: 36 GQLTQLGMEQHYELGEYIRKRYRK--------FLNESYKHEQVYIRSTDVDRTLMSAMTN 87
Query: 584 AKGLLALEGELT--------PILVQMVKSANTNGLLDNDSDASKHQNIVKA 626
L EG PI V V + L + + Q +
Sbjct: 88 LAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQLLYLPFRNCPRFQELESE 138
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1266 | |||
| 3t7a_A | 330 | Inositol pyrophosphate kinase; ATP-grAsp fold, tra | 100.0 | |
| 2p0a_A | 344 | Synapsin-3, synapsin III; neurotransmitter release | 99.93 | |
| 1i7n_A | 309 | Synapsin II; synapse, phosphorylation, neuropeptid | 99.93 | |
| 1pk8_A | 422 | RAT synapsin I; ATP binding, ATP grAsp, calcium (I | 99.93 | |
| 2q7d_A | 346 | Inositol-tetrakisphosphate 1-kinase; inositol kina | 99.9 | |
| 1uc8_A | 280 | LYSX, lysine biosynthesis enzyme; alpha-aminoadipa | 99.79 | |
| 1z2n_X | 324 | Inositol 1,3,4-trisphosphate 5/6-kinase; inositol | 99.79 | |
| 3ln6_A | 750 | Glutathione biosynthesis bifunctional protein GSH; | 99.69 | |
| 1gsa_A | 316 | Glutathione synthetase; ligase; HET: ADP GSH; 2.00 | 99.68 | |
| 3ln7_A | 757 | Glutathione biosynthesis bifunctional protein GSH; | 99.68 | |
| 3r5x_A | 307 | D-alanine--D-alanine ligase; alpha-beta structure, | 99.66 | |
| 1iow_A | 306 | DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho | 99.58 | |
| 4eg0_A | 317 | D-alanine--D-alanine ligase; structural genomics, | 99.55 | |
| 1e4e_A | 343 | Vancomycin/teicoplanin A-type resistance protein; | 99.41 | |
| 2fb9_A | 322 | D-alanine:D-alanine ligase; 1.90A {Thermus caldoph | 99.4 | |
| 3df7_A | 305 | Putative ATP-grAsp superfamily protein; putative p | 99.38 | |
| 1ehi_A | 377 | LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g | 99.38 | |
| 3se7_A | 346 | VANA; alpha-beta structure, D-alanine-D-lactate li | 99.36 | |
| 2pvp_A | 367 | D-alanine-D-alanine ligase; 2.40A {Helicobacter py | 99.36 | |
| 2i87_A | 364 | D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco | 99.32 | |
| 2z04_A | 365 | Phosphoribosylaminoimidazole carboxylase ATPase su | 99.3 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 99.25 | |
| 2pn1_A | 331 | Carbamoylphosphate synthase large subunit; ZP_0053 | 99.23 | |
| 3k3p_A | 383 | D-alanine--D-alanine ligase; D-alanyl-alanine synt | 99.23 | |
| 3aw8_A | 369 | PURK, phosphoribosylaminoimidazole carboxylase, AT | 99.23 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 99.2 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 99.19 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 99.18 | |
| 3tqt_A | 372 | D-alanine--D-alanine ligase; cell envelope; 1.88A | 99.18 | |
| 2ip4_A | 417 | PURD, phosphoribosylamine--glycine ligase; GAR syn | 99.18 | |
| 3i12_A | 364 | D-alanine-D-alanine ligase A; D-alanyl-alanine syn | 99.16 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 99.15 | |
| 1dkq_A | 410 | Phytase; histidine acid phosphatase fold, hydrolas | 99.12 | |
| 2wnh_A | 418 | 3-phytase; histidine acid phosphatase, hydrolase; | 99.11 | |
| 1vkz_A | 412 | Phosphoribosylamine--glycine ligase; TM1250, struc | 99.11 | |
| 3e5n_A | 386 | D-alanine-D-alanine ligase A; bacterial blight; 2. | 99.11 | |
| 2yw2_A | 424 | Phosphoribosylamine--glycine ligase; glycinamide r | 99.1 | |
| 3lwb_A | 373 | D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan | 99.09 | |
| 2yrx_A | 451 | Phosphoribosylglycinamide synthetase; glycinamide | 99.09 | |
| 4fu0_A | 357 | D-alanine--D-alanine ligase 7; vancomycin resistan | 99.09 | |
| 3it3_A | 342 | Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A | 99.09 | |
| 2xcl_A | 422 | Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- | 99.08 | |
| 1nd6_A | 354 | Prostatic acid phosphatase; PAP, prostate, phospha | 99.08 | |
| 2qk4_A | 452 | Trifunctional purine biosynthetic protein adenosi; | 99.05 | |
| 3vot_A | 425 | L-amino acid ligase, BL00235; ATP-grAsp motif, ATP | 99.03 | |
| 3lp8_A | 442 | Phosphoribosylamine-glycine ligase; ssgcid, NIH, n | 99.02 | |
| 2w70_A | 449 | Biotin carboxylase; ligase, ATP-binding, fatty aci | 99.01 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 98.99 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 98.99 | |
| 2r85_A | 334 | PURP protein PF1517; ATP-grAsp superfamily, unknow | 98.98 | |
| 3mjf_A | 431 | Phosphoribosylamine--glycine ligase; structural ge | 98.98 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 98.97 | |
| 1ulz_A | 451 | Pyruvate carboxylase N-terminal domain; biotin car | 98.96 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 98.96 | |
| 3eth_A | 355 | Phosphoribosylaminoimidazole carboxylase ATPase su | 98.95 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 98.95 | |
| 2vpq_A | 451 | Acetyl-COA carboxylase; bacteria, ATP-grAsp domain | 98.93 | |
| 2dzd_A | 461 | Pyruvate carboxylase; biotin carboxylase, ligase; | 98.87 | |
| 3n6r_A | 681 | Propionyl-COA carboxylase, alpha subunit; protein | 98.82 | |
| 3u9t_A | 675 | MCC alpha, methylcrotonyl-COA carboxylase, alpha-s | 98.74 | |
| 3glk_A | 540 | Acetyl-COA carboxylase 2; ATP binding, alternative | 98.72 | |
| 3jrx_A | 587 | Acetyl-COA carboxylase 2; BC domain, soraphen A, a | 98.72 | |
| 1a9x_A | 1073 | Carbamoyl phosphate synthetase (large chain); amid | 98.71 | |
| 1w96_A | 554 | ACC, acetyl-coenzyme A carboxylase; ligase, obesit | 98.71 | |
| 1a9x_A | 1073 | Carbamoyl phosphate synthetase (large chain); amid | 98.7 | |
| 3vmm_A | 474 | Alanine-anticapsin ligase BACD; ATP-grAsp domain, | 98.7 | |
| 2qf7_A | 1165 | Pyruvate carboxylase protein; multi-domain, multi- | 98.67 | |
| 3va7_A | 1236 | KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A | 98.59 | |
| 3hbl_A | 1150 | Pyruvate carboxylase; TIM barrel, ligase; HET: BTI | 98.58 | |
| 3ntl_A | 398 | Acid glucose-1-phosphate phosphatase; histidine ac | 98.49 | |
| 2gfi_A | 458 | Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces | 98.48 | |
| 1qwo_A | 442 | Phytase; alpha barrel, beta sandwich, orthogonal b | 98.4 | |
| 1qfx_A | 460 | Protein (PH 2.5 acid phosphatase); phosphomonoeste | 98.3 | |
| 3k4q_A | 444 | 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hex | 98.22 | |
| 2pbz_A | 320 | Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt | 98.19 | |
| 2r7k_A | 361 | 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib | 97.68 | |
| 2cqy_A | 108 | Propionyl-COA carboxylase alpha chain, mitochondri | 96.41 | |
| 1wr2_A | 238 | Hypothetical protein PH1789; structural genomics, | 95.82 | |
| 3eoz_A | 214 | Putative phosphoglycerate mutase; PGAM, malaria, s | 95.69 | |
| 3gp3_A | 257 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 95.34 | |
| 3kkk_A | 258 | Phosphoglycerate mutase; PGAM, glycolysis, malaria | 95.24 | |
| 1ujc_A | 161 | Phosphohistidine phosphatase SIXA; alpha-beta fold | 95.22 | |
| 1e58_A | 249 | Phosphoglycerate mutase; phosphohistidine, glycoly | 95.13 | |
| 1qhf_A | 240 | Protein (phosphoglycerate mutase); transferase (ph | 95.08 | |
| 4eo9_A | 268 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 94.98 | |
| 2rfl_A | 173 | Putative phosphohistidine phosphatase SIXA; alpha- | 94.97 | |
| 1yfk_A | 262 | Phosphoglycerate mutase 1; alpha/beta, isomerase, | 94.86 | |
| 3d8h_A | 267 | Glycolytic phosphoglycerate mutase; structural gen | 94.82 | |
| 3r7a_A | 237 | Phosphoglycerate mutase, putative; structural geno | 94.81 | |
| 2hhj_A | 267 | Bisphosphoglycerate mutase; isomerase; HET: NEP DG | 94.77 | |
| 3mbk_A | 264 | Ubiquitin-associated and SH3 domain-containing PR; | 94.73 | |
| 3mxo_A | 202 | Serine/threonine-protein phosphatase PGAM5, mitoc; | 94.73 | |
| 1fzt_A | 211 | Phosphoglycerate mutase; open B-sheet-helices, iso | 94.56 | |
| 3e9c_A | 265 | ZGC:56074; histidine phosphatase, hydrolase; 2.00A | 94.47 | |
| 1h2e_A | 207 | Phosphatase, YHFR; hydrolase, broad specificity ph | 94.47 | |
| 3c7t_A | 263 | Ecdysteroid-phosphate phosphatase; ecdysone, 2H-ph | 94.4 | |
| 4emb_A | 274 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 94.38 | |
| 3d4i_A | 273 | STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domai | 94.25 | |
| 3f2i_A | 172 | ALR0221 protein; alpha-beta protein, structural ge | 94.1 | |
| 3f3k_A | 265 | Uncharacterized protein YKR043C; structural genomi | 93.98 | |
| 1rii_A | 265 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 93.97 | |
| 3dcy_A | 275 | Regulator protein; OMIM 610775, C12ORF5, tigar, TP | 93.94 | |
| 2qni_A | 219 | AGR_C_517P, uncharacterized protein ATU0299; MCSG, | 93.68 | |
| 3hjg_A | 213 | Putative alpha-ribazole-5'-phosphate phosphatase C | 93.22 | |
| 2a6p_A | 208 | Possible phosphoglycerate mutase GPM2; predicted p | 93.18 | |
| 3fjy_A | 364 | Probable MUTT1 protein; dimer, protein structure i | 92.64 | |
| 1v37_A | 177 | Phosphoglycerate mutase; riken structu genomics/pr | 91.95 | |
| 4hbz_A | 186 | Putative phosphohistidine phosphatase, SIXA; struc | 90.27 | |
| 2axn_A | 520 | 6-phosphofructo-2-kinase/fructose-2,6- biphosphata | 88.97 | |
| 2io8_A | 619 | Bifunctional glutathionylspermidine synthetase/ami | 88.9 | |
| 3it3_A | 342 | Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A | 87.14 | |
| 1bif_A | 469 | 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; | 85.68 | |
| 1nd6_A | 354 | Prostatic acid phosphatase; PAP, prostate, phospha | 84.11 | |
| 3tig_A | 380 | TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si | 81.97 |
| >3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-122 Score=1006.58 Aligned_cols=327 Identities=76% Similarity=1.285 Sum_probs=315.2
Q ss_pred CCCCeEEEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccc-cccccccccceeeccccCCCcHHHHHHHHhhcC
Q psy10158 46 EEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCLISFHSKGFPLEKAIKYANLRK 124 (1266)
Q Consensus 46 ~~~~~i~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP~cD~LIsFfS~GfPL~KAi~Y~klrk 124 (1266)
..+++|+|||||||+||+|||||+||+||.++++||+|||+|++|| ||||+||.|||||||||+||||+|||+|+++|+
T Consensus 3 ~~~~~~~~gvcam~~k~~s~pm~~il~rl~~~~~f~~iif~d~~il~~~ve~wp~~d~lisf~s~gfpl~kai~y~~lr~ 82 (330)
T 3t7a_A 3 FTERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRN 82 (330)
T ss_dssp ---CCEEEEEESCHHHHTSHHHHHHHHHHTTSTTEEEEECCHHHHHHSCGGGSCCCSEEEECCCTTCCHHHHHHHHHHHC
T ss_pred CCCCceEEEEEecccccccHHHHHHHHHhcccCcEEEEEeCCCceecCCcccCCcCCEEEEeccCCCcHHHHHHHHHHhC
Confidence 4568999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEE
Q psy10158 125 PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYI 204 (1266)
Q Consensus 125 p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~I 204 (1266)
||+|||+.+|.++|||+++|++|+++|||+|+|++++|+...+...+++|.+|+|+++|++|.+||||||++|+||||||
T Consensus 83 p~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~kPfVeKPv~Gsdhni~i 162 (330)
T 3t7a_A 83 PFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYI 162 (330)
T ss_dssp CEESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSEEEETTEEEESSEEEEESBTTCCCCEE
T ss_pred CceeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCccccceeccchhhhhccccccCCeeEcccccccCccee
Confidence 99999999999999999999999999999999999999988788889999999999999999999999999999999999
Q ss_pred EeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCC
Q psy10158 205 YYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGK 284 (1266)
Q Consensus 205 Yyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgK 284 (1266)
|||++||||++|||||+||+||+|+|++.+|++++|||||||+++|+||||||||++|||||+|+||++||+||||+|||
T Consensus 163 yyp~s~GgG~~RLfrki~n~sS~~~~~~~vr~~~~~i~QEFI~~~G~DIRv~vVG~~vv~Am~R~sp~~~G~~r~N~~gG 242 (330)
T 3t7a_A 163 YYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGK 242 (330)
T ss_dssp ECCGGGTCCEEEEEEEETTEEEEEESCCSCCSSSCEEEEECCCCSSEEEEEEEESTTCEEEEEEECTTSSCBCCBCTTSC
T ss_pred ecccccCCchhhhhhhhCCcccccChhhhhccCCcEEEEeccCCCCceEEEEEECCEEEEEEEEeCCCCCCcEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEeeCCHHHHHHHHHHHHHhCCccceeeEEeeCCCeEEEeecCceecccCchhhHHHHHHHHHHHHHhhCCCCCCCC
Q psy10158 285 EIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTLHIPW 364 (1266)
Q Consensus 285 EiRypV~LT~eEK~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNGwSFVK~n~kYYDdcA~ILr~~~l~~l~p~~~ip~ 364 (1266)
|+|++|+||++|++||+|||+||||+||||||||++++|||||||||||||+|.+|||+||+|||++||++++|+++|||
T Consensus 243 ~~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~EVNg~~fvk~~~~yyd~~a~il~~~~~~~~~~~~~~~~ 322 (330)
T 3t7a_A 243 EVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPW 322 (330)
T ss_dssp BCCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEEEEEESCCCSSCHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ceeeeecCCHHHHHHHHHHHHHhCCceEEEEEEEECCccEEEEeCCCccccCchhHHHHHHHHHHHHHHHHhCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q psy10158 365 SVPFQLDD 372 (1266)
Q Consensus 365 ~~p~~~~~ 372 (1266)
++|.+++|
T Consensus 323 ~~~~~~~~ 330 (330)
T 3t7a_A 323 SIPLEAED 330 (330)
T ss_dssp CC------
T ss_pred cCCCCCCC
Confidence 99987653
|
| >2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=255.48 Aligned_cols=222 Identities=14% Similarity=0.195 Sum_probs=169.2
Q ss_pred ccceeeccccCCC-----cHHHHHHHHhhcCCccccCccchhhhhHH----HHHHHHHHhcCC---CCCCeEEeccCCCC
Q psy10158 99 IVDCLISFHSKGF-----PLEKAIKYANLRKPFVINNLNMQYDIQDR----RKVYALLEKEGI---EIPRYAVLDRESPD 166 (1266)
Q Consensus 99 ~cD~LIsFfS~Gf-----PL~KAi~Y~klrkp~~lNdl~~Q~ilrDR----r~vlqiL~~~gI---p~P~tv~~~rd~~~ 166 (1266)
..|++|.+-.... ....++.+++..+.++||+..+....+|| ...+++|.+.|| |+|.+.+...
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~GvpviN~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~~~~---- 160 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPN---- 160 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEESCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEEESS----
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceecCCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEEecCc----
Confidence 5799999887643 11467788999999999999999999999 889999999999 8655555421
Q ss_pred CccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-cCcceEEeec
Q psy10158 167 PVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-KSGSFIYEDF 245 (1266)
Q Consensus 167 ~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-~~gSyIYEEF 245 (1266)
..+.+..- ..|+|+||++|+ +|.|+. |.+......+.. ..+. .+..|+.|||
T Consensus 161 --------~~~~~~~~----g~PvVvK~~~Gs-----------~G~GV~-lve~~~~~~~~~---~~~~~~~~~~~vQef 213 (344)
T 2p0a_A 161 --------HKPMVTAP----HFPVVVKLGHAH-----------AGMGKI-KVENQLDFQDIT---SVVAMAKTYATTEAF 213 (344)
T ss_dssp --------STTCCCCS----SSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHH---HHHHHHTCCEEEEEC
T ss_pred --------hhhhhhcc----CCCEEEEeCCCC-----------ceeCeE-EECCHHHHHHHH---HHHhccCCeEEEEec
Confidence 11223323 489999999999 699984 666432111111 1222 3455668999
Q ss_pred cCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh-CCccceeeEEeeCCC-e
Q psy10158 246 MPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF-KQTVCGFDLLRANGK-S 323 (1266)
Q Consensus 246 I~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF-Gq~VCGfDLLRs~gg-s 323 (1266)
|+ .|.||||+|||++++ |+.|+++ .|.|+.|.+ ++...++.||++++++|.+++++| |++|||||||++++| .
T Consensus 214 I~-~g~DiRv~VVGg~vv-a~~R~~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~Aa~a~gGldi~GVDll~~~~G~~ 288 (344)
T 2p0a_A 214 ID-SKYDIRIQKIGSNYK-AYMRTSI--SGNWKANTG-SAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRD 288 (344)
T ss_dssp CC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-SEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSCE
T ss_pred cC-CCccEEEEEECCEEE-EEEEecC--CCCCeecCC-ceEEEeeCCCHHHHHHHHHHHHHhCCCCEEEEEEEEcCCCCE
Confidence 99 689999999999998 6666675 799999996 678889999999999999999999 799999999999766 5
Q ss_pred EEEeecCceecccCchhhHHHHHHHHHHHHHhhC
Q psy10158 324 FVCDVNGFSFVKNSNKYYDDSAKILGNMILRELA 357 (1266)
Q Consensus 324 yVcDVNGwSFVK~n~kYYDdcA~ILr~~~l~~l~ 357 (1266)
||||||+ ||.-.=...-.+++.-+..+|++.+.
T Consensus 289 ~VlEVN~-~~~P~~~~~~~~~~~~Ia~~ii~~i~ 321 (344)
T 2p0a_A 289 YIIEVMD-SSMPLIGEHVEEDRQLMADLVVSKMS 321 (344)
T ss_dssp EEEEEEC-TTCCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcC-CCCCcccchhhhHHHHHHHHHHHHHH
Confidence 9999999 55544445556666666666666553
|
| >1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=250.86 Aligned_cols=218 Identities=15% Similarity=0.201 Sum_probs=165.1
Q ss_pred ccceeeccccCCC-----cHHHHHHHHhhcCCccccCccchhhhhHH----HHHHHHHHhcCC---CCCCeEEeccCCCC
Q psy10158 99 IVDCLISFHSKGF-----PLEKAIKYANLRKPFVINNLNMQYDIQDR----RKVYALLEKEGI---EIPRYAVLDRESPD 166 (1266)
Q Consensus 99 ~cD~LIsFfS~Gf-----PL~KAi~Y~klrkp~~lNdl~~Q~ilrDR----r~vlqiL~~~gI---p~P~tv~~~rd~~~ 166 (1266)
..|++|.+-.+.. ....++.+++..+.+++|++.+....+|| ...+++|++.|+ |+|.+.+...
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~GvpviN~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~~~~---- 143 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSINSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPN---- 143 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS----
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCccccCCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEEeeCC----
Confidence 5799998876665 22567788999999999999999999999 788999999999 8555555421
Q ss_pred CccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-cCcceEEeec
Q psy10158 167 PVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-KSGSFIYEDF 245 (1266)
Q Consensus 167 ~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-~~gSyIYEEF 245 (1266)
. .+.+.. +..|+|+||++|+ +|.|+. |.+.. ...-+.-..+. .+..++.|||
T Consensus 144 ~--------~~~~~~----~g~PvVvK~~~Gs-----------~G~GV~-lv~~~---~~~~~~~~~~~~~~~~~~vQef 196 (309)
T 1i7n_A 144 H--------REMLTL----PTFPVVVKIGHAH-----------SGMGKV-KVENH---YDFQDIASVVALTQTYATAEPF 196 (309)
T ss_dssp G--------GGGSSC----CCSSEEEEESSCS-----------TTTTEE-EECSH---HHHHHHHHHHHHHTCCEEEEEC
T ss_pred h--------hhhhhc----cCCCEEEEeCCCC-----------ceeCeE-EECCH---HHHHHHHHHHhccCCeEEEEee
Confidence 1 112221 2489999999999 699984 66542 21111001222 3455668999
Q ss_pred cCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh-CCccceeeEEeeCCC-e
Q psy10158 246 MPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF-KQTVCGFDLLRANGK-S 323 (1266)
Q Consensus 246 I~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF-Gq~VCGfDLLRs~gg-s 323 (1266)
|+ .|.||||++||++++ |+.|+++ .|.|+.|.+ ++...++.||++++++|.+++++| |++|||||||++++| .
T Consensus 197 I~-~g~DiRv~VvGg~v~-a~~Rr~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~A~~a~gGldi~GVDll~~~~g~~ 271 (309)
T 1i7n_A 197 ID-AKYDIRVQKIGNNYK-AYMRTSI--SGNWKTNTG-SAMLEQIAMSDRYKLWVDACSEMFGGLDICAVKAVHGKDGKD 271 (309)
T ss_dssp CC-EEEEEEEEEETTEEE-EEEEESS--CTTTSCSCC-CSSEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSCE
T ss_pred cC-CCceEEEEEECCEEE-EEEEEcC--CCCCeecCC-cceeeecCCCHHHHHHHHHHHHHhCCCCEEEEEEEEcCCCCE
Confidence 99 699999999999987 7777775 799999996 577789999999999999999999 799999999999766 6
Q ss_pred EEEeecC--ceecccCchhhHHHHHHHHHHHHHh
Q psy10158 324 FVCDVNG--FSFVKNSNKYYDDSAKILGNMILRE 355 (1266)
Q Consensus 324 yVcDVNG--wSFVK~n~kYYDdcA~ILr~~~l~~ 355 (1266)
||||||+ .=+.++... +.+.-+.++++..
T Consensus 272 ~V~EVN~~~~P~~~~~~~---~~~~~ia~~ii~~ 302 (309)
T 1i7n_A 272 YIFEVMDCSMPLIGEHQV---EDRQLITDLVISK 302 (309)
T ss_dssp EEEEEECTTCCCCSSCHH---HHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCccchhh---hhHHHHHHHHHHH
Confidence 9999999 777665543 3444444444433
|
| >1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=259.68 Aligned_cols=221 Identities=17% Similarity=0.206 Sum_probs=165.9
Q ss_pred ccceeeccccCCC-----cHHHHHHHHhhcCCccccCccchhhhhHH----HHHHHHHHhcCC---CCCCeEEeccCCCC
Q psy10158 99 IVDCLISFHSKGF-----PLEKAIKYANLRKPFVINNLNMQYDIQDR----RKVYALLEKEGI---EIPRYAVLDRESPD 166 (1266)
Q Consensus 99 ~cD~LIsFfS~Gf-----PL~KAi~Y~klrkp~~lNdl~~Q~ilrDR----r~vlqiL~~~gI---p~P~tv~~~rd~~~ 166 (1266)
..|++|.+-.... ....++.+++..+.++||+..+..+.+|| ...+++|.+.|| |+|.+.+...
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~GvpviNs~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~~~~---- 255 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPN---- 255 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS----
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCccccCCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceEecCc----
Confidence 5799999886655 12577888999999999999999999999 678999999999 8545444421
Q ss_pred CccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-cCcceEEeec
Q psy10158 167 PVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-KSGSFIYEDF 245 (1266)
Q Consensus 167 ~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-~~gSyIYEEF 245 (1266)
..+.+... ..|+|+||++|+ +|.|+. |.+.. ...-+.-..+. .+..|+.|||
T Consensus 256 --------~~~~i~~~----g~PvVvKp~~GS-----------~G~GV~-lve~~---~~l~~ii~~~~~~~~~~~vQEf 308 (422)
T 1pk8_A 256 --------HKEMLSST----TYPVVVKMGHAH-----------SGMGKV-KVDNQ---HDFQDIASVVALTKTYATAEPF 308 (422)
T ss_dssp --------GGGCCCCS----SSSEEEEESSCC-----------TTTTEE-EECSH---HHHHHHHHHHHHHTSCEEEEEC
T ss_pred --------hhhhhhcc----CCCEEEEeCCCC-----------ceeCeE-EeCCH---HHHHHHHHHHhccCceEEEEee
Confidence 11223223 489999999999 699984 66542 21111001222 3455667999
Q ss_pred cCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh-CCccceeeEEeeCCC-e
Q psy10158 246 MPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF-KQTVCGFDLLRANGK-S 323 (1266)
Q Consensus 246 I~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF-Gq~VCGfDLLRs~gg-s 323 (1266)
|+ .|.||||+|||++|+ |+.|+++ .|.||.|++ ++...++.||++++++|.+++++| |++|||||||++++| .
T Consensus 309 I~-~g~DIRv~VVGg~vv-a~~Rr~~--~g~WrtNvg-~g~~e~i~lt~e~~elA~kAaka~gGldiaGVDlL~s~dG~~ 383 (422)
T 1pk8_A 309 ID-AKYDVRVQKIGQNYK-AYMRTSV--SGNWKTNTG-SAMLEQIAMSDRYKLWVDTCSEIFGGLDICAVEALHGKDGRD 383 (422)
T ss_dssp CC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-CEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSCE
T ss_pred cC-CCceEEEEEECCEEE-EEEEEcC--CCCceeccC-ceeeeeeCCCHHHHHHHHHHHHHhCCCCEEEEEEEEcCCCCE
Confidence 99 689999999999998 6777764 799999995 678889999999999999999999 899999999999766 6
Q ss_pred EEEeecCceecccCchhhHHHHHHHHHHHHHhh
Q psy10158 324 FVCDVNGFSFVKNSNKYYDDSAKILGNMILREL 356 (1266)
Q Consensus 324 yVcDVNGwSFVK~n~kYYDdcA~ILr~~~l~~l 356 (1266)
||||||+ ||.-.=...=.+.+.-+.++++..+
T Consensus 384 ~VlEVN~-s~~P~~~g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 384 HIIEVVG-SSMPLIGDHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp EEEEEEC-TTCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEECC-CCCCCccchhhhHHHHHHHHHHHHH
Confidence 9999999 3332222333455555666666554
|
| >2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-23 Score=229.25 Aligned_cols=275 Identities=17% Similarity=0.259 Sum_probs=188.0
Q ss_pred CeEEEEEEecCCccCChhHHHHHHHHhhcCcEEEEEecccccccccccccccceeeccccCCCc------------HHHH
Q psy10158 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDCLISFHSKGFP------------LEKA 116 (1266)
Q Consensus 49 ~~i~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvILe~vE~WP~cD~LIsFfS~GfP------------L~KA 116 (1266)
+..+||.|--.||.++-=.+.+++-|.+.|. +++.+.-.. ++.....+|++|......++ +...
T Consensus 17 ~~~~vG~~l~~kk~~~~~~~~l~~al~~~G~-~~~~iD~~~---~~~~~~~~Dvvi~~l~~~~~ea~~~d~~~~~~~~~l 92 (346)
T 2q7d_A 17 KGKRVGYWLSEKKIKKLNFQAFAELCRKRGM-EVVQLNLSR---PIEEQGPLDVIIHKLTDVILEADQNDSQSLELVHRF 92 (346)
T ss_dssp TTCEEEEECCHHHHHHHTHHHHHHHHHTTTC-EEEECCTTS---CSGGGCCCSEEEECCHHHHHHHHTTCHHHHHHHHHH
T ss_pred CceEEEEEECcccchhhhHHHHHHHHHhCCc-EEEEccccc---chhhcCCCCEEEeCCcccccccccCchhHHHHHHHH
Confidence 5678999999999888878888888888764 565555433 22333679999999876433 2333
Q ss_pred HHHHh-hcCCccccCccchhhhhHHHHHHHHHHhc-------CCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecC
Q psy10158 117 IKYAN-LRKPFVINNLNMQYDIQDRRKVYALLEKE-------GIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNK 188 (1266)
Q Consensus 117 i~Y~k-lrkp~~lNdl~~Q~ilrDRr~vlqiL~~~-------gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~k 188 (1266)
.+|.. ..+.++||.......++||..++++|++. |||+|+++++....... ..+.+...+ +..
T Consensus 93 ~~~~~~~~gv~vinp~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~~~-------~~~~~~~~~--lg~ 163 (346)
T 2q7d_A 93 QEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCGDD-------TMRLLEKNG--LTF 163 (346)
T ss_dssp HHHHHHCTTSEEESCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEEECSCCCTT-------HHHHHHHTT--CCS
T ss_pred HHHHHHCCCeEEcCCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEEEEeCCCHHH-------HHHHHHhcC--CCC
Confidence 44443 24789999999999999999999999997 99999999997531100 111111111 358
Q ss_pred CEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeec
Q psy10158 189 PFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEAR 268 (1266)
Q Consensus 189 PfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~R 268 (1266)
|+|+||+.|.- +.+-|+. + +.+... +. ..+..++.||||+.+|.|+||||||+.+++++.|
T Consensus 164 P~VvKP~~g~G---------s~s~~v~-~---v~~~~~-l~-----~~~~~~lvQefI~~~G~dirv~VvG~~v~~~~r~ 224 (346)
T 2q7d_A 164 PFICKTRVAHG---------TNSHEMA-I---VFNQEG-LN-----AIQPPCVVQNFINHNAVLYKVFVVGESYTVVQRP 224 (346)
T ss_dssp SEEEECSBCSS---------TTCCEEE-E---ECSGGG-TT-----C--CCEEEEECCCCTTEEEEEEEETTEEEEEEEE
T ss_pred CEEEEecCCCc---------ceeeeeE-E---ecCHHH-HH-----hcCCCEEEEEeeCCCCeEEEEEEECCEEEEEEEe
Confidence 99999998740 0133432 1 212111 11 1356799999999899999999999999988666
Q ss_pred cCCCC-CC-------ceee-cCC-CCceee---------EeeC--CHHHHHHHHHHHHHhCCccceeeEEeeC--CCeEE
Q psy10158 269 KSPAL-DG-------KVER-DSE-GKEIRY---------PVIL--SNAEKLISRKVCLAFKQTVCGFDLLRAN--GKSFV 325 (1266)
Q Consensus 269 KSPvv-DG-------~VRR-N~h-gKEiRy---------pV~L--T~eEK~IA~kaakAFGq~VCGfDLLRs~--ggsyV 325 (1266)
..|.+ .| .|.+ |.+ +++.++ ...+ +++.+++|.++++++|++++|||+++.. |++||
T Consensus 225 sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~el~~lA~~a~~alGl~~~gvDii~~~~~g~~~V 304 (346)
T 2q7d_A 225 SLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQHAV 304 (346)
T ss_dssp CCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECTTTCCEEE
T ss_pred cCCCcCcCccccccccccceeeccCCccccccccccccccccCCChHHHHHHHHHHHHHhCCceEeeEEEeecCCCCEEE
Confidence 55421 01 2332 223 343321 2333 4678999999999999999999999985 78999
Q ss_pred EeecCceecccCchhhHHHHHHHHHHHHHh
Q psy10158 326 CDVNGFSFVKNSNKYYDDSAKILGNMILRE 355 (1266)
Q Consensus 326 cDVNGwSFVK~n~kYYDdcA~ILr~~~l~~ 355 (1266)
+|||.|-=-++-.+|...+.++|.+.+-+.
T Consensus 305 lEVN~~PG~~g~~~~~~~i~~~l~~~~~~~ 334 (346)
T 2q7d_A 305 IDINAFPGYEGVSEFFTDLLNHIATVLQGQ 334 (346)
T ss_dssp EEEEESCCCTTCTTHHHHHHHHHHHHHHHH
T ss_pred EEEeCCccccccchHHHHHHHHHHHHhhcc
Confidence 999999333445578877777776666444
|
| >1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.2e-19 Score=180.26 Aligned_cols=236 Identities=19% Similarity=0.176 Sum_probs=160.9
Q ss_pred hhHHHHHHHHhhcCcEEEEEeccccccccc----ccccccc-eeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhH
Q psy10158 65 KPMKEILTRLEEFEFIKMIVFSEETIQKPV----DEWPIVD-CLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQD 139 (1266)
Q Consensus 65 kPMr~IL~RL~~~g~f~viiF~dkvILe~v----E~WP~cD-~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrD 139 (1266)
.-.+.+...+.+.|. +++++......-.+ ..|+.+| ++++.++ ++-...+.++++..+..++|+.....+++|
T Consensus 11 ~~~~~~~~a~~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~d 88 (280)
T 1uc8_A 11 PDERMLFERAEALGL-PYKKVYVPALPMVLGERPKELEGVTVALERCVS-QSRGLAAARYLTALGIPVVNRPEVIEACGD 88 (280)
T ss_dssp HHHHHHHHHHHHHTC-CEEEEEGGGCCEETTBCCGGGTTCCEEEECCSS-HHHHHHHHHHHHHTTCCEESCHHHHHHHHB
T ss_pred HHHHHHHHHHHHcCC-cEEEEehhhceeeccCCCcccCCCCEEEECCcc-chhhHHHHHHHHHCCCceeCCHHHHHHhCC
Confidence 445677777877774 56655433222111 3478899 7888776 232346667777777667799999999999
Q ss_pred HHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhc
Q psy10158 140 RRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219 (1266)
Q Consensus 140 Rr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lfr 219 (1266)
|...+++|+++|||+|++..+.... +..+.+. .+..|+|+||..|. .|.|+. +.+
T Consensus 89 K~~~~~~l~~~gi~~p~~~~~~~~~---------~~~~~~~----~~~~p~vvKp~~g~-----------~~~gv~-~v~ 143 (280)
T 1uc8_A 89 KWATSVALAKAGLPQPKTALATDRE---------EALRLME----AFGYPVVLKPVIGS-----------WGRLLA-XXX 143 (280)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSHH---------HHHHHHH----HHCSSEEEECSBCC-----------BCSHHH-HHH
T ss_pred HHHHHHHHHHcCcCCCCeEeeCCHH---------HHHHHHH----HhCCCEEEEECCCC-----------Ccccce-ecc
Confidence 9999999999999999999885411 0111111 12379999999997 477775 444
Q ss_pred ccCCccccccCCcccc--cCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHH
Q psy10158 220 KIGSRSSVYSPESRVR--KSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK 297 (1266)
Q Consensus 220 KignkSS~y~p~s~vr--~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK 297 (1266)
....-...+..-..+. .+..||+||||+..|.+++|+++|++++++..|++ +.++.|.+.++...|..|+++-+
T Consensus 144 ~~~el~~~~~~~~~~~~~~~~~~lvqe~i~~~~~e~~v~v~~~~~~~~~~~~~----~~~~~~~~~g~~~~p~~l~~~~~ 219 (280)
T 1uc8_A 144 XXXXXXXXXXXKEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRS----AHWITNTARGGQAENCPLTEEVA 219 (280)
T ss_dssp HHHC------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHHH
T ss_pred cccccchhhhhHhhhcccCCCcEEEEeccCCCCceEEEEEECCEEEEEEEEec----CCccccccCCccccCCCCCHHHH
Confidence 3221111111000022 26789999999987899999999999999988874 66888988888888999999999
Q ss_pred HHHHHHHHHhCCccceeeEEeeCCCeEEEeecCc
Q psy10158 298 LISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGF 331 (1266)
Q Consensus 298 ~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNGw 331 (1266)
++|.++++++|..++|||++...+++||+|||..
T Consensus 220 ~~~~~~~~~lg~g~~~vD~~~~~~g~~~iEiN~r 253 (280)
T 1uc8_A 220 RLSVKAAEAVGGGVVAVDLFESERGLLVNEVNHT 253 (280)
T ss_dssp HHHHHHHHHTTCSEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHHHHhCCCeEEEEEEEeCCCeEEEEEeCC
Confidence 9999999999999999999999778999999963
|
| >1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=188.88 Aligned_cols=242 Identities=16% Similarity=0.244 Sum_probs=161.7
Q ss_pred CCeEEEEEEecCCccCChhHHHHHHHHhhcCcEEE--EEeccccccccccccc-ccceeeccccCCCc-HHHHHHHHhh-
Q psy10158 48 GKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKM--IVFSEETIQKPVDEWP-IVDCLISFHSKGFP-LEKAIKYANL- 122 (1266)
Q Consensus 48 ~~~i~iGVCAMd~Ka~SkPMr~IL~RL~~~g~f~v--iiF~dkvILe~vE~WP-~cD~LIsFfS~GfP-L~KAi~Y~kl- 122 (1266)
.+..+|||+.-+++. |- .+...|.+.| +++ +++.-.. ++..+- .+|+++.....-+. +..+++.+..
T Consensus 9 ~~~m~i~il~~~~~~-s~---~l~~al~~~G-~~v~~~~~d~~~---~~~~~~~~~d~v~~~~~~~~~~~~~~l~~~~~~ 80 (324)
T 1z2n_X 9 KQTVSLFIWLPESKQ-KT---LFISTKNHTQ-FELNNIIFDVTL---STELPDKEPNAIITKRTHPVGKMADEMRKYEKD 80 (324)
T ss_dssp -CEEEEEEECCHHHH-HH---HBSSCCSEEE-EEETTEEEEEEE---ESSCCSSCCSEEEECCSCSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEEEchhhh-hh---hHHHHHHhcC-cEEEEEEecCCC---CccccCCCceEEEEeccchHHHHHHHHHHHHHh
Confidence 356789998855544 21 3333333333 566 6665322 222222 57999887754333 2444454443
Q ss_pred -cCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcc
Q psy10158 123 -RKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHN 201 (1266)
Q Consensus 123 -rkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHN 201 (1266)
.+..++|+.....+++||...+++|+++|||+|++..++... ++ .+.+.-.| +..|+|+||..|..
T Consensus 81 ~~g~~~~~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~~~~~~------~~---~~~~~~~~--~~~P~vvKP~~g~g-- 147 (324)
T 1z2n_X 81 HPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFSVKSKE------EV---IQLLQSKQ--LILPFIVKPENAQG-- 147 (324)
T ss_dssp CTTSEEETCHHHHHHHTBHHHHHHHHHHTTCCCSCEEEESSHH------HH---HHHHHTTC--SCSSEEEEESBCSS--
T ss_pred CCCCeEeCCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEeCCHH------HH---HHHHHHcC--CCCCEEEeeCCCCC--
Confidence 456678999999999999999999999999999999986421 01 11111011 34799999999862
Q ss_pred eEEEeccCCC---CchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCC-C----
Q psy10158 202 IYIYYPTSAG---GGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPA-L---- 273 (1266)
Q Consensus 202 I~IYyp~s~G---gGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPv-v---- 273 (1266)
| .|+. + +.+.. ++. ..+..+|+||||+..|.|++|+++|+++++++ |+++. +
T Consensus 148 ---------~~~s~gv~-~---v~~~~-~l~-----~~~~~~lvqe~i~~~g~~~~v~v~g~~~~~~~-~~~~~~~~~g~ 207 (324)
T 1z2n_X 148 ---------TFNAHQMK-I---VLEQE-GID-----DIHFPCLCQHYINHNNKIVKVFCIGNTLKWQT-RTSLPNVHRCG 207 (324)
T ss_dssp ---------SSGGGEEE-E---ECSGG-GGT-----TCCSSEEEEECCCCTTCEEEEEEETTEEEEEE-ECCCCCCCCSS
T ss_pred ---------CccceeeE-E---EeCHH-HHh-----hcCCCEEEEEccCCCCcEEEEEEECCEEEEEE-ecCcccccCCC
Confidence 3 2332 1 21211 111 13678999999998889999999999999985 44431 1
Q ss_pred -------------------------------CCceeecCCCCceeeEeeCC-HHHHHHHHHHHHHhCCccceeeEEee-C
Q psy10158 274 -------------------------------DGKVERDSEGKEIRYPVILS-NAEKLISRKVCLAFKQTVCGFDLLRA-N 320 (1266)
Q Consensus 274 -------------------------------DG~VRRN~hgKEiRypV~LT-~eEK~IA~kaakAFGq~VCGfDLLRs-~ 320 (1266)
.+.++.|.+. +...+..++ ++-+++|.++++++|+.+||||++.. .
T Consensus 208 ~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~a~~~~~~lg~~~~~vD~~~~~~ 286 (324)
T 1z2n_X 208 IKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILE-DPILLNLTSEAEMRDLAYKVRCALGVQLCGIDFIKENE 286 (324)
T ss_dssp CCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCS-CTTTTTSCCHHHHHHHHHHHHHHHTCSEEEEEEECGGG
T ss_pred ccceeeccccchhhhccccccccccccccccccchhhcccc-CCccccCCCHHHHHHHHHHHHHHhCCcEEeeEEEEEcC
Confidence 1345556654 333567888 78999999999999999999999987 3
Q ss_pred -CCeEEEeecCc
Q psy10158 321 -GKSFVCDVNGF 331 (1266)
Q Consensus 321 -ggsyVcDVNGw 331 (1266)
|.+||+|||.+
T Consensus 287 ~g~~~vlEvN~~ 298 (324)
T 1z2n_X 287 QGNPLVVDVNVF 298 (324)
T ss_dssp CSSCEEEEEEES
T ss_pred CCCEEEEEEcCC
Confidence 77999999943
|
| >3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-17 Score=201.82 Aligned_cols=177 Identities=17% Similarity=0.256 Sum_probs=135.3
Q ss_pred cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEecc
Q psy10158 129 NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPT 208 (1266)
Q Consensus 129 Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~ 208 (1266)
+...+..+.+||..+.++|+++|||+|++.++..... ..+.+ ...+..|+|+||..|.
T Consensus 474 ~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~~~~~~~e---------a~~~~---~~~~g~PvVVKP~~G~---------- 531 (750)
T 3ln6_A 474 DNYIVPLAMANKVVTKKILDEKHFPTPFGDEFTDRKE---------ALNYF---SQIQDKPIVVKPKSTN---------- 531 (750)
T ss_dssp SCTHHHHHTTTSHHHHHHHHHTTCCCCCCCCEETTTT---------HHHHH---HHSSSSCEEEEETTCC----------
T ss_pred CHHHHHHHHhCHHHHHHHHHHCCcCCCCEEEECCHHH---------HHHHH---HHhcCCcEEEEeCCCC----------
Confidence 3444556668999999999999999999998864211 11112 0113489999999998
Q ss_pred CCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCC--C-----------
Q psy10158 209 SAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPAL--D----------- 274 (1266)
Q Consensus 209 s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvv--D----------- 274 (1266)
+|.|+. +++.+.+....-..- ...+.+..+|.||||+ |.|++|++||+++++|+.|.++.+ |
T Consensus 532 -~G~GV~-iv~~~~s~eel~~a~~~~~~~~~~vlVEefI~--G~E~~v~Vvgg~vvaa~~r~p~~v~GdG~~tI~eLI~~ 607 (750)
T 3ln6_A 532 -FGLGIS-IFKTSANLASYEKAIDIAFTEDSAILVEEYIE--GTEYRFFVLEGDCIAVLLRVAANVVGDGIHTISQLVKL 607 (750)
T ss_dssp -SSSSCE-EESSCCCHHHHHHHHHHHHHHCSEEEEEECCC--SEEEEEEEETTEEEEEEEEECCEEECCTTCCHHHHHHH
T ss_pred -CCCCEE-EEeCCCCHHHHHHHHHHHHhhCCcEEEEeccC--CCEEEEEEECCEEEEEEEEecceEecCCccCHHHHHHh
Confidence 588884 665443332221110 0112477899999998 899999999999999999998743 1
Q ss_pred -----------------------------------------Cc-----eeecCCCCceeeEe--eCCHHHHHHHHHHHHH
Q psy10158 275 -----------------------------------------GK-----VERDSEGKEIRYPV--ILSNAEKLISRKVCLA 306 (1266)
Q Consensus 275 -----------------------------------------G~-----VRRN~hgKEiRypV--~LT~eEK~IA~kaakA 306 (1266)
|+ ++.|.+.||....| .++++.+++|.+||++
T Consensus 608 ~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~ 687 (750)
T 3ln6_A 608 KNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIELRRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEA 687 (750)
T ss_dssp HTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEESCSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHH
T ss_pred hccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEEeecccccCCCceeeccccCCHHHHHHHHHHHHH
Confidence 33 67999999999999 7999999999999999
Q ss_pred hCCccceeeEEeeC---------CCeEEEeecCc
Q psy10158 307 FKQTVCGFDLLRAN---------GKSFVCDVNGF 331 (1266)
Q Consensus 307 FGq~VCGfDLLRs~---------ggsyVcDVNGw 331 (1266)
+|+.||||||+..+ ++.+|||||+=
T Consensus 688 igl~~~GvDli~~di~~~~~~~~~~~~iiEvN~~ 721 (750)
T 3ln6_A 688 MGAWVCGVDLIIPNATQAYSKDKKNATCIELNFN 721 (750)
T ss_dssp HTCSSCEEEEEESCSSSCCCTTTTCCEEEEEESS
T ss_pred hCCCeEEEEEEecCccccccccCCCeEEEEEcCC
Confidence 99999999999874 46699999974
|
| >1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-17 Score=170.85 Aligned_cols=197 Identities=14% Similarity=0.200 Sum_probs=147.4
Q ss_pred cccccceeeccccCCCcH-----HHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccc
Q psy10158 96 EWPIVDCLISFHSKGFPL-----EKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKH 170 (1266)
Q Consensus 96 ~WP~cD~LIsFfS~GfPL-----~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~ 170 (1266)
.|..+|+++.+...++.. ...++.++..+..++|+.....+.+||+..+++|+ |+|++..++...
T Consensus 76 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~dK~~~~~~l~----~~P~t~~~~~~~------ 145 (316)
T 1gsa_A 76 PLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSD----LTPETLVTRNKA------ 145 (316)
T ss_dssp EGGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEESCHHHHHHCCTTGGGGGGTT----TSCCEEEESCHH------
T ss_pred ccccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEecCHHHHHhhhhHHHHHhhhh----cCCCeEEeCCHH------
Confidence 456799999977655532 35566676777778899999999999999999997 999999885310
Q ss_pred cccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc--cCcceEEeeccC
Q psy10158 171 ELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR--KSGSFIYEDFMP 247 (1266)
Q Consensus 171 ~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr--~~gSyIYEEFI~ 247 (1266)
++ ...+. .+. |+|+||..|. .|.|+.+ .+. +.. ++..- ..+. ....+|+||||+
T Consensus 146 ~~---~~~~~----~~~-p~vvKP~~g~-----------~g~Gv~~-v~~--~~~-~l~~~~~~~~~~~~~~~lvqe~i~ 202 (316)
T 1gsa_A 146 QL---KAFWE----KHS-DIILKPLDGM-----------GGASIFR-VKE--GDP-NLGVIAETLTEHGTRYCMAQNYLP 202 (316)
T ss_dssp HH---HHHHH----HHS-SEEEECSSCC-----------TTTTCEE-ECT--TCT-THHHHHHHHTTTTTSCEEEEECCG
T ss_pred HH---HHHHH----HcC-CEEEEECCCC-----------CcccEEE-ecC--ChH-HHHHHHHHHHhcCCceEEEecccC
Confidence 01 01111 124 9999999997 4667642 220 111 11100 0111 246899999999
Q ss_pred C-CCceEEEEEECCceeE-EeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHH---hCCccceeeEEeeCCC
Q psy10158 248 T-DGTDVKVYTVGPDYAH-AEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLA---FKQTVCGFDLLRANGK 322 (1266)
Q Consensus 248 t-~GtDVKVYtVGp~~vh-Ae~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakA---FGq~VCGfDLLRs~gg 322 (1266)
- .+.||+|+++|+++++ +..|+++ .|.++.|.|.++...+..|+++.+++|.+++++ +|+.++|||++ |
T Consensus 203 ~~~~~~~~v~~~~g~~~~~~~~r~~~--~~~~~~~~~~gg~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~vD~~---g- 276 (316)
T 1gsa_A 203 AIKDGDKRVLVVDGEPVPYCLARIPQ--GGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDII---G- 276 (316)
T ss_dssp GGGGCEEEEEEETTEECSEEEEEECC--SSCSCCCGGGTCEEEEEECCHHHHHHHHHHHHHHHHTTCCEEEEEEE---T-
T ss_pred CCCCCCEEEEEECCEEeeeEEEEeCC--CCCceeEEccCCccccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEec---C-
Confidence 6 5899999999999998 9999874 688999999888889999999999999999987 59999999998 4
Q ss_pred eEEEeecCc
Q psy10158 323 SFVCDVNGF 331 (1266)
Q Consensus 323 syVcDVNGw 331 (1266)
+||+|||..
T Consensus 277 ~~~iEvN~r 285 (316)
T 1gsa_A 277 DRLTEINVT 285 (316)
T ss_dssp TEEEEEECS
T ss_pred CEEEEEcCC
Confidence 699999963
|
| >3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-17 Score=201.10 Aligned_cols=171 Identities=18% Similarity=0.284 Sum_probs=129.9
Q ss_pred hhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCc
Q psy10158 134 QYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGG 213 (1266)
Q Consensus 134 Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgG 213 (1266)
-.+.+||..+.++|+++|||+|++.++.... +..+.+ ...+..|+|+||..|. .|.|
T Consensus 484 a~~~~DK~~tk~lL~~~GIPvP~~~~~~~~~---------ea~~~~---~~~~g~PvVVKP~~g~-----------~G~G 540 (757)
T 3ln7_A 484 PLIMENKVVTKKVLQKAGFNVPQSVEFTSLE---------KAVASY---ALFENRAVVIKPKSTN-----------YGLG 540 (757)
T ss_dssp HHHHHHSHHHHHHHHHHTCCCCCEEEESCHH---------HHHHGG---GGSSSSCEEEEESSCS-----------TTTT
T ss_pred HHHhcCHHHHHHHHHHCCcCCCCEEEECCHH---------HHHHHH---HHhcCCCEEEEeCCCC-----------CCCC
Confidence 3455899999999999999999999885411 010111 0123489999999998 5888
Q ss_pred hhhhhc-ccCCccccccC-CcccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCC------------------
Q psy10158 214 SQRLFR-KIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPAL------------------ 273 (1266)
Q Consensus 214 v~~Lfr-KignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvv------------------ 273 (1266)
+. ++. ++.+....-.. +...+.+..+|.||||+ |.|++|+|||+++++|+.|.+|-|
T Consensus 541 V~-iv~~~v~~~eel~~al~~a~~~~~~vlVEefI~--G~Ei~v~Vlggkvvaai~R~p~~VvGDG~~ti~eLi~~~n~~ 617 (757)
T 3ln7_A 541 IT-IFQQGVQNREDFAKALEIAFREDKEVMVEDYLV--GTEYRFFVLGDETLAVLLRVPANVVGDSVHSVAELVAMKNDH 617 (757)
T ss_dssp CE-ECSSCCCCHHHHHHHHHHHHHHCSSEEEEECCC--SEEEEEEEETTEEEEEEEECCSEEEGGGCCCHHHHHHHHHTS
T ss_pred eE-EecCCCCCHHHHHHHHHHHHhcCCcEEEEEcCC--CcEEEEEEECCEEEEEEEEecccccCCCcccHHHHHHhhccc
Confidence 85 442 22222221110 00112467899999995 899999999999999999998632
Q ss_pred ------------------------------------CCc-----eeecCCCCceeeEe--eCCHHHHHHHHHHHHHhCCc
Q psy10158 274 ------------------------------------DGK-----VERDSEGKEIRYPV--ILSNAEKLISRKVCLAFKQT 310 (1266)
Q Consensus 274 ------------------------------------DG~-----VRRN~hgKEiRypV--~LT~eEK~IA~kaakAFGq~ 310 (1266)
.|+ ++.|.+.||....| .++++.+++|.+||+++|+.
T Consensus 618 p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~Ge~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl~ 697 (757)
T 3ln7_A 618 PLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGAA 697 (757)
T ss_dssp TTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSSCEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTCS
T ss_pred ccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEeecccccccCccceeccccCCHHHHHHHHHHHHHhCCC
Confidence 243 58899999999999 99999999999999999999
Q ss_pred cceeeEEeeC---------CCeEEEeecC
Q psy10158 311 VCGFDLLRAN---------GKSFVCDVNG 330 (1266)
Q Consensus 311 VCGfDLLRs~---------ggsyVcDVNG 330 (1266)
||||||+..+ ++..|||||+
T Consensus 698 ~~GvDli~~di~~p~~~~~~~~~iiEvN~ 726 (757)
T 3ln7_A 698 VCGVDLIIPDLKQPATPNLTSWGVIEANF 726 (757)
T ss_dssp EEEEEEEESCSSSCCCSSTTTCEEEEEES
T ss_pred EEEEEEEecCccccccccCCCeEEEEEcC
Confidence 9999999872 4779999996
|
| >3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-16 Score=167.10 Aligned_cols=255 Identities=14% Similarity=0.166 Sum_probs=171.1
Q ss_pred HHHHHHHHhhcCcEEEEEecccccccccccccccceeeccccCCCcHH-HHHHHHhhcCC-ccccCccchhhhhHHHHHH
Q psy10158 67 MKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDCLISFHSKGFPLE-KAIKYANLRKP-FVINNLNMQYDIQDRRKVY 144 (1266)
Q Consensus 67 Mr~IL~RL~~~g~f~viiF~dkvILe~vE~WP~cD~LIsFfS~GfPL~-KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vl 144 (1266)
-+.|++-|.+.| ++++.+.-......++....+|++++....++-.+ .+.++++..+. ++-|+.....+.+||....
T Consensus 24 ~~~v~~al~~~g-~~v~~i~~~~~~~~~~~~~~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~ 102 (307)
T 3r5x_A 24 GNEMIANLDKNK-YEIVPITLNEKMDLIEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISK 102 (307)
T ss_dssp HHHHHHHSCTTT-EEEEEEECSSGGGHHHHTTTCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEcccCchhHHHhccCCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHH
Confidence 457778887766 67777654422222333467899998765443221 33445666654 4457799999999999999
Q ss_pred HHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCc
Q psy10158 145 ALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSR 224 (1266)
Q Consensus 145 qiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignk 224 (1266)
++|+++|||+|++..+..... +.. ..+. .+..|+|+||..|. .|.|+. + +.+.
T Consensus 103 ~~l~~~Gip~p~~~~~~~~~~------~~~--~~~~----~~~~P~vvKP~~~~-----------~s~Gv~-~---v~~~ 155 (307)
T 3r5x_A 103 KILRYEGIETPDWIELTKMED------LNF--DELD----KLGFPLVVKPNSGG-----------SSVGVK-I---VYDK 155 (307)
T ss_dssp HHHHHTTCCCCCEEEEESSSC------CCH--HHHH----HHCSSEEEEECC---------------CCCE-E---ECSH
T ss_pred HHHHHCCCCCCCEEEEeChhh------hhH--HHHH----hcCCCEEEEeCCCC-----------CCCCEE-E---eCCH
Confidence 999999999999999875221 000 0111 23489999999986 355653 2 2222
Q ss_pred cccccCC-cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCC--ceeecC-CCCceeeEeeCCHHH----
Q psy10158 225 SSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDG--KVERDS-EGKEIRYPVILSNAE---- 296 (1266)
Q Consensus 225 SS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG--~VRRN~-hgKEiRypV~LT~eE---- 296 (1266)
......- ...+.+..+|+||||+ |.++.|.++|+++.++..+... .+ .++.+. ++|...+|+.|++++
T Consensus 156 ~el~~~~~~~~~~~~~~lvee~i~--G~e~~v~v~~g~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~p~~l~~~~~~~i 231 (307)
T 3r5x_A 156 DELISMLETVFEWDSEVVIEKYIK--GEEITCSIFDGKQLPIISIRHA--AEFFDYNAKYDDASTIEEVIELPAELKERV 231 (307)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCC--SEEEEEEEETTEECCCEEEEEE--EEEETTEEEEEEEEEEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCcC--CEEEEEEEECCEEeeEEEEEcC--CcccChhhcCCCCCCeEecCCCCHHHHHHH
Confidence 1111100 0112367899999998 8999999999988666444442 33 466666 677777799999976
Q ss_pred HHHHHHHHHHhCCc-cceeeEEeeCCCeEEEeecCc------eec-----ccCchhhHHHHHHHHHHHH
Q psy10158 297 KLISRKVCLAFKQT-VCGFDLLRANGKSFVCDVNGF------SFV-----KNSNKYYDDSAKILGNMIL 353 (1266)
Q Consensus 297 K~IA~kaakAFGq~-VCGfDLLRs~ggsyVcDVNGw------SFV-----K~n~kYYDdcA~ILr~~~l 353 (1266)
+++|.++++++|.. +++||++..+|++||+|||.. |.+ .....|-+-+++||..-+-
T Consensus 232 ~~~a~~~~~~lg~~G~~~vD~~~~~g~~~vlEiN~rpg~~~~s~~~~~~~~~G~~~~~li~~ll~~a~~ 300 (307)
T 3r5x_A 232 NKASLACYKALKCSVYARVDMMVKDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSLR 300 (307)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEEEETTEEEEEEEESSCCCSTTSHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEEEECCeEEEEEEcCCCCCCccCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 88999999999999 999999999999999999953 322 2344566667777766543
|
| >1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=6.9e-15 Score=154.05 Aligned_cols=232 Identities=13% Similarity=0.159 Sum_probs=152.7
Q ss_pred HHHHHHHhhcCcEEEEEecccccc-cccccccccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHH
Q psy10158 68 KEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVY 144 (1266)
Q Consensus 68 r~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vl 144 (1266)
+.+++.|.+.| ++++++.-.... ..+. ...+|+++.....++..+ ...+.++..+ |++-|+.....+.+||....
T Consensus 24 ~~l~~al~~~G-~~v~~~~~~~~~~~~~~-~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~ 101 (306)
T 1iow_A 24 AAVLAGLREGG-IDAYPVDPKEVDVTQLK-SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSK 101 (306)
T ss_dssp HHHHHHHHHTT-CEEEEECTTTSCGGGTT-TTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHCC-CeEEEEecCchHHHHhh-ccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHH
Confidence 56777777766 467776544322 2222 136799988764333332 2233455444 55569999999999999999
Q ss_pred HHHHhcCCCCCCeEEeccCCCCCcccccccc-CC----eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhc
Q psy10158 145 ALLEKEGIEIPRYAVLDRESPDPVKHELVES-ED----HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219 (1266)
Q Consensus 145 qiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~-~D----~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lfr 219 (1266)
++|+++|||+|++..++.. . +.+. .. .+. .+..|+|+||..|. .|.|+. +.+
T Consensus 102 ~~l~~~gi~~p~~~~~~~~-~------~~~~~~~~~~~~~~----~~~~p~vvKP~~g~-----------~~~gv~-~v~ 158 (306)
T 1iow_A 102 LLWQGAGLPVAPWVALTRA-E------FEKGLSDKQLAEIS----ALGLPVIVKPSREG-----------SSVGMS-KVV 158 (306)
T ss_dssp HHHHHTTCCBCCEEEEEHH-H------HHHCCCTHHHHHHH----TTCSSEEEEETTCC-----------TTTTCE-EES
T ss_pred HHHHHCCCCCCCeEEEchh-h------hhccchhhhhhHHh----ccCCCEEEEeCCCC-----------CCCCEE-EeC
Confidence 9999999999999988642 1 1110 00 110 13479999999996 355663 322
Q ss_pred ccCCccccccCCcc-cccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCC--ceeecCCCCceee--EeeCCH
Q psy10158 220 KIGSRSSVYSPESR-VRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDG--KVERDSEGKEIRY--PVILSN 294 (1266)
Q Consensus 220 KignkSS~y~p~s~-vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG--~VRRN~hgKEiRy--pV~LT~ 294 (1266)
+.......-.. ...+..+|.||||+ |.+++|.++|+++.++..+... ++ .++.+.+.|+..+ |..|++
T Consensus 159 ---~~~el~~~~~~~~~~~~~~lvee~i~--g~e~~v~~~~g~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~p~~l~~ 231 (306)
T 1iow_A 159 ---AENALQDALRLAFQHDEEVLIEKWLS--GPEFTVAILGEEILPSIRIQPS--GTFYDYEAKFLSDETQYFCPAGLEA 231 (306)
T ss_dssp ---SGGGHHHHHHHHTTTCSEEEEEECCC--CCEEEEEEETTEECCCEEEECS--SSSSCHHHHHTCSCCEEESSCCCCH
T ss_pred ---CHHHHHHHHHHHHhhCCCEEEEeCcC--CEEEEEEEECCCccceEEEEeC--CCeEchhheecCCCeeEEcCCCCCH
Confidence 22211000001 12367899999998 8999999999987776655432 22 2345555555433 556775
Q ss_pred ----HHHHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeecCc
Q psy10158 295 ----AEKLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 295 ----eEK~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVNGw 331 (1266)
+-+++|.++++++|.. ++|||++.. +|++||+|||..
T Consensus 232 ~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~~iEiN~r 274 (306)
T 1iow_A 232 SQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTS 274 (306)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEEEEEEcCCCCEEEEEecCC
Confidence 3467899999999997 999999998 467999999975
|
| >4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=153.67 Aligned_cols=253 Identities=12% Similarity=0.055 Sum_probs=157.8
Q ss_pred eEEEEEEecC----CccCChhHHHHHHHHhhcCcEEEEEecccccc-cccccccccceeeccccCCCcH-HHHHHHHhhc
Q psy10158 50 QVIVGVCAMA----KKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCLISFHSKGFPL-EKAIKYANLR 123 (1266)
Q Consensus 50 ~i~iGVCAMd----~Ka~SkPMr~IL~RL~~~g~f~viiF~dkvIL-e~vE~WP~cD~LIsFfS~GfPL-~KAi~Y~klr 123 (1266)
+.+|+|-+=- .-+.-.--++|++-|.+.| ++++.++.+.-. +.+. +..+|++++....++-. ....++++..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g-~~v~~i~~~~~~~~~l~-~~~~D~v~~~~hg~~ge~~~~~~~le~~ 90 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAG-IDAHPFDPAERPLSALK-DEGFVRAFNALHGGYGENGQIQGALDFY 90 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT-CEEEEECTTTSCTTHHH-HTTCCEEEECCCSGGGTSSHHHHHHHHH
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCC-CEEEEEeCCCchHHHhh-hcCCCEEEEcCCCCCCchHHHHHHHHHc
Confidence 4566665431 1111235688999998876 577777754433 3332 34678888765544433 2455666666
Q ss_pred CCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcce
Q psy10158 124 KPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNI 202 (1266)
Q Consensus 124 kp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI 202 (1266)
+...+ |+.....+.+||....++|+++|||+|++..+..... +. +.+.---..+..|+|+||..|.
T Consensus 91 gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~------~~---~~~~~~~~~~g~PvvvKP~~~~---- 157 (317)
T 4eg0_A 91 GIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFETVMRGDD------YA---ARATDIVAKLGLPLFVKPASEG---- 157 (317)
T ss_dssp TCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEEETTSC------HH---HHHHHHHHHHCSCEEEEECC------
T ss_pred CCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEEEECchh------HH---HHHHHHHHhcCCCEEEEeCCCC----
Confidence 65555 7889999999999999999999999999999875321 10 0000000123489999999986
Q ss_pred EEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCC--ceee
Q psy10158 203 YIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDG--KVER 279 (1266)
Q Consensus 203 ~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG--~VRR 279 (1266)
.|.|+. + +.+.......- .....+..+|.||||+. |.++.|.++|+.+.++..+... ++ .++.
T Consensus 158 -------~s~Gv~-~---v~~~~el~~a~~~~~~~~~~~lvEe~i~~-G~E~~v~vl~~~~~~~~~i~~~--~~~~~~~~ 223 (317)
T 4eg0_A 158 -------SSVAVL-K---VKTADALPAALSEAATHDKIVIVEKSIEG-GGEYTACIAGDLDLPLIKIVPA--GEFYDYHA 223 (317)
T ss_dssp ----------CCE-E---ECSGGGHHHHHHHHTTTCSEEEEEECCCS-SEEEEEEEETTCCCCCEEEEC-----------
T ss_pred -------CCCCEE-E---ECCHHHHHHHHHHHHhCCCeEEEEcCCCC-CcEEEEEEECCcccceEEEeeC--Cceechhh
Confidence 355653 2 32222111100 01234678999999986 8999999999987777666542 22 1334
Q ss_pred cCCCCceee--EeeCCHH----HHHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeecCc
Q psy10158 280 DSEGKEIRY--PVILSNA----EKLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 280 N~hgKEiRy--pV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVNGw 331 (1266)
+.+.++..+ |..|+++ =+++|.++++++|.. +|+||++.. +|++||+|||-.
T Consensus 224 k~~~g~~~~~~P~~l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~~ 283 (317)
T 4eg0_A 224 KYVANDTQYLIPCGLPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTA 283 (317)
T ss_dssp ------CEEESSCSSCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTCCEEEEEEESS
T ss_pred cccCCCeeEEcCCCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEEEEeeCC
Confidence 444444443 5557764 367889999999997 999999987 677999999943
|
| >1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-12 Score=140.71 Aligned_cols=201 Identities=17% Similarity=0.212 Sum_probs=133.0
Q ss_pred cccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
..+|++++.+.-.+-.+ ...+.++..+ |++-|+..+..+.+||....++|+++|||+|++..+..... + +.
T Consensus 89 ~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~------~-~~ 161 (343)
T 1e4e_A 89 NHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDR------P-VA 161 (343)
T ss_dssp EECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEEECTTCC------C-CG
T ss_pred ccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCEEEEechhh------h-hh
Confidence 35799988764333221 2334445444 55668899999999999999999999999999999865321 0 00
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVK 254 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVK 254 (1266)
..+..|+|+||..|. .|.|+. + +.+.......- ...+.+..+|.||||+ |.++.
T Consensus 162 --------~~~~~PvvvKP~~~~-----------~s~Gv~-~---v~~~~el~~a~~~~~~~~~~~lvEe~I~--G~E~~ 216 (343)
T 1e4e_A 162 --------ATFTYPVFVKPARSG-----------SSFGVK-K---VNSADELDYAIESARQYDSKILIEQAVS--GCEVG 216 (343)
T ss_dssp --------GGSCSCEEEEESSCC-----------TTTTCE-E---ECSGGGHHHHHHHHTTTCSSEEEEECCC--SEEEE
T ss_pred --------hccCCCEEEEeCCCC-----------CCCCEE-E---eCCHHHHHHHHHHHHhcCCcEEEEeCcC--CeEEE
Confidence 234589999999986 355653 2 22222111100 0123467899999997 89999
Q ss_pred EEEECCc----eeEEeeccCCCCCCceeecCC----CCcee--eEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEee
Q psy10158 255 VYTVGPD----YAHAEARKSPALDGKVERDSE----GKEIR--YPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRA 319 (1266)
Q Consensus 255 VYtVGp~----~vhAe~RKSPvvDG~VRRN~h----gKEiR--ypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs 319 (1266)
|.++|.. +.....+...----.++.+.+ .|+.. .|..|++ +-+++|.++++++|.. +|+||++..
T Consensus 217 v~vl~~~~~~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~ 296 (343)
T 1e4e_A 217 CAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQ 296 (343)
T ss_dssp EEEEEETTCCEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSCSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred EEEEeCCCCeEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEe
Confidence 9999865 233333322100011344555 44443 3455775 5678999999999995 999999986
Q ss_pred -CCCeEEEeecC
Q psy10158 320 -NGKSFVCDVNG 330 (1266)
Q Consensus 320 -~ggsyVcDVNG 330 (1266)
+|.+||+|||-
T Consensus 297 ~~g~~~viEiN~ 308 (343)
T 1e4e_A 297 DNGRIVLNEVNT 308 (343)
T ss_dssp TTCCEEEEEEES
T ss_pred CCCCEEEEEeeC
Confidence 57799999994
|
| >2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=9.7e-13 Score=142.35 Aligned_cols=198 Identities=14% Similarity=0.186 Sum_probs=135.8
Q ss_pred cccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
..+|++++.+.-.+-.+ .....++..+ |++-++..+-.+.+||....++|+++|||+|++..+.+.. .
T Consensus 75 ~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~----------~ 144 (322)
T 2fb9_A 75 ERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGE----------P 144 (322)
T ss_dssp TTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEEETTS----------C
T ss_pred cCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEECch----------h
Confidence 35899998874333332 3445555555 5555789999999999999999999999999999986521 1
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCC-ceE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDG-TDV 253 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~G-tDV 253 (1266)
+.+ .+..|+|+||..|. .|.|+. + +.+....... +...+.+..+|.||||+ | .++
T Consensus 145 -~~~-----~~g~PvvvKP~~g~-----------~s~Gv~-~---v~~~~el~~a~~~~~~~~~~vlvEe~I~--G~~E~ 201 (322)
T 2fb9_A 145 -PVV-----PFDPPFFVKPANTG-----------SSVGIS-R---VERFQDLEAALALAFRYDEKAVVEKALS--PVREL 201 (322)
T ss_dssp -CCC-----CSCSCEEEEETTCC-----------TTTTCE-E---ESSHHHHHHHHHHHTTTCSEEEEEECCS--SCEEE
T ss_pred -hhh-----ccCCCEEEEeCCCC-----------CCCCEE-E---ECCHHHHHHHHHHHHhcCCeEEEEeCCC--CCeeE
Confidence 111 34589999999986 355653 2 2222211110 00123467899999996 7 899
Q ss_pred EEEEECCc---eeEEeeccCCCCCCc--eeecCCCCcee--eEeeCCH----HHHHHHHHHHHHhCC-ccceeeEEeeCC
Q psy10158 254 KVYTVGPD---YAHAEARKSPALDGK--VERDSEGKEIR--YPVILSN----AEKLISRKVCLAFKQ-TVCGFDLLRANG 321 (1266)
Q Consensus 254 KVYtVGp~---~vhAe~RKSPvvDG~--VRRN~hgKEiR--ypV~LT~----eEK~IA~kaakAFGq-~VCGfDLLRs~g 321 (1266)
.|.++|.. +.++..+... .+. ++.+.+.+... .|..|++ +-+++|.++++++|. .+|+||++..+|
T Consensus 202 ~v~vl~~~~~~~~~~~ei~~~--~~~~~~~~k~~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~g 279 (322)
T 2fb9_A 202 EVGVLGNVFGEASPVGEVRYE--APFYDYETKYTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAEG 279 (322)
T ss_dssp EEEEESSSSCEEEEEEEEEEE--CCEEETTTEEECCEEEEESSCCCCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEETT
T ss_pred EEEEEeCCCceEeeeEEEeeC--CCccCHHHcccCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEECC
Confidence 99999985 5555544421 111 22333344333 4556776 667899999999999 899999998877
Q ss_pred CeEEEeecC
Q psy10158 322 KSFVCDVNG 330 (1266)
Q Consensus 322 gsyVcDVNG 330 (1266)
++||+|||-
T Consensus 280 ~~~vlEiN~ 288 (322)
T 2fb9_A 280 ELYLNELNT 288 (322)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEEEC
Confidence 899999996
|
| >3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=140.57 Aligned_cols=174 Identities=15% Similarity=0.191 Sum_probs=125.0
Q ss_pred ccccceeecc-ccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 97 WPIVDCLISF-HSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 97 WP~cD~LIsF-fS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
.+.||+++.. +.....+...++.++..++++.|+.....+.+||....++|++ |||+|++.+.
T Consensus 67 ~~~~D~~~~i~~~ed~~l~~~~~~l~~~g~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~~~--------------- 130 (305)
T 3df7_A 67 LEKSDAFLIIAPEDDFLLYTLTKKAEKYCENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTSLR--------------- 130 (305)
T ss_dssp HTTCSEEEEECCCGGGHHHHHHHHHHTTSEESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEESS---------------
T ss_pred HHhcCEEEEEccCCcHHHHHHHHHHHhcCCccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEecc---------------
Confidence 4678875543 2223344677777777777999999999999999999999999 9999999851
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
.+..|+|+||.+|. .|.|+. +.+ + .+..+|.||||+ |.++.|
T Consensus 131 ---------~~~~P~vvKP~~g~-----------gs~Gv~-~v~---~------------~~~~~lvEe~I~--G~e~sv 172 (305)
T 3df7_A 131 ---------PLDCKFIIKPRTAC-----------AGEGIG-FSD---E------------VPDGHIAQEFIE--GINLSV 172 (305)
T ss_dssp ---------CCSSSEEEEESSCC---------------CB-CCS---S------------CCTTEEEEECCC--SEEEEE
T ss_pred ---------cCCCCEEEEeCCCC-----------CCCCEE-EEe---c------------CCCCEEEEeccC--CcEEEE
Confidence 12489999999987 355653 222 2 467899999999 899999
Q ss_pred EEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCC----HHHHHHHHHHHHHh-CC-ccceeeEEeeCCCeEEEeec
Q psy10158 256 YTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILS----NAEKLISRKVCLAF-KQ-TVCGFDLLRANGKSFVCDVN 329 (1266)
Q Consensus 256 YtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT----~eEK~IA~kaakAF-Gq-~VCGfDLLRs~ggsyVcDVN 329 (1266)
.+++++.+++..+.....+. + ... +...|..|+ ++-+++|.++++++ |. .++|||++.. |++||+|||
T Consensus 173 ~v~~g~~~~~~~~~~~~~~~-~---~~~-g~~~p~~l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~-~~~~viEiN 246 (305)
T 3df7_A 173 SLAVGEDVKCLSVNEQIINN-F---RYA-GAVVPARISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS-DQPYVIEIN 246 (305)
T ss_dssp EEEESSSEEEEEEEEEEEET-T---EEE-EEEESCCCCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES-SSEEEEEEE
T ss_pred EEEeCCeEEEEEEeeEeccC-c---eec-cccccCCCCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC-CCEEEEEEc
Confidence 99965555554432110111 1 111 223466677 56778999999999 84 6899999996 899999999
Q ss_pred C
Q psy10158 330 G 330 (1266)
Q Consensus 330 G 330 (1266)
.
T Consensus 247 p 247 (305)
T 3df7_A 247 A 247 (305)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-12 Score=145.20 Aligned_cols=207 Identities=16% Similarity=0.141 Sum_probs=138.1
Q ss_pred cccceeeccccCCCcHH-HHHHHHhhcCCcc-ccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIKYANLRKPFV-INNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~Y~klrkp~~-lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
..+|++++.+.-.+..+ .+...++..+... -|+..+..+.+||....++|+++|||+|++..+..... .. ..+.
T Consensus 92 ~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~~-~~-~~~~-- 167 (377)
T 1ehi_A 92 GDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIVVDPESA-NN-WSWD-- 167 (377)
T ss_dssp CCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCEEEECTTGG-GG-CCHH--
T ss_pred cCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCEEEEecccc-ch-HHHH--
Confidence 46899999875444443 4445666666544 49999999999999999999999999999999865311 00 0000
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCC-ceE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDG-TDV 253 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~G-tDV 253 (1266)
+.+ ..+..|+|+||..|. .|.|+. + +.|....-.. +.....+..+|.||||+ | .++
T Consensus 168 -~~~----~~~g~PvvVKP~~~~-----------~s~Gv~-~---v~~~~el~~a~~~~~~~~~~vlvEe~I~--G~~E~ 225 (377)
T 1ehi_A 168 -KIV----AELGNIVFVKAANQG-----------SSVGIS-R---VTNAEEYTEALSDSFQYDYKVLIEEAVN--GAREL 225 (377)
T ss_dssp -HHH----HHHCSCEEEEESSCC-----------TTTTEE-E---ECSHHHHHHHHHHHTTTCSCEEEEECCC--CSCEE
T ss_pred -HHH----HhcCCCEEEEeCCCC-----------CCcCEE-E---eCCHHHHHHHHHHHHhcCCcEEEEcCCC--CCceE
Confidence 001 123489999999986 355653 2 2222211100 00122467899999996 7 899
Q ss_pred EEEEECCc---eeEEeeccCCC---CCCce--eecCCCC-ce--eeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEE
Q psy10158 254 KVYTVGPD---YAHAEARKSPA---LDGKV--ERDSEGK-EI--RYPVILSNAE----KLISRKVCLAFKQT-VCGFDLL 317 (1266)
Q Consensus 254 KVYtVGp~---~vhAe~RKSPv---vDG~V--RRN~hgK-Ei--RypV~LT~eE----K~IA~kaakAFGq~-VCGfDLL 317 (1266)
.|.++|+. +++...+.... ..|.+ +.+.+.+ +. ..|..|++++ +++|.++++++|.. +|+||++
T Consensus 226 ~v~vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~ 305 (377)
T 1ehi_A 226 EVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDFL 305 (377)
T ss_dssp EEEEEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 99999874 66665555410 12222 2333333 33 3466788654 67899999999997 9999999
Q ss_pred ee-CCCeEEEeecC
Q psy10158 318 RA-NGKSFVCDVNG 330 (1266)
Q Consensus 318 Rs-~ggsyVcDVNG 330 (1266)
.. +|.+||+|||-
T Consensus 306 ~~~~g~~~vlEiN~ 319 (377)
T 1ehi_A 306 LDENNVPYLGEPNT 319 (377)
T ss_dssp ECTTCCEEEEEEES
T ss_pred EeCCCCEEEEEEeC
Confidence 97 57799999995
|
| >3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {} | Back alignment and structure |
|---|
Probab=99.36 E-value=1e-11 Score=135.39 Aligned_cols=219 Identities=15% Similarity=0.184 Sum_probs=142.0
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++++...-.+-. .....++++.+ ||+-++..+..+.+||....++|+++|||+|++..+.....
T Consensus 90 ~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~----------- 158 (346)
T 3se7_A 90 RLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADEK----------- 158 (346)
T ss_dssp ECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEEEETTSC-----------
T ss_pred CCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCEEEEcCcHH-----------
Confidence 479998887544444 35566776665 56667789999999999999999999999999999975320
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
.. -..+..|+|+||..|. .|.|+. + +.+....-.. +...+.+..+|.||||+ |.++.|
T Consensus 159 ~~----~~~lg~PvvvKP~~~~-----------~s~Gv~-~---v~~~~el~~a~~~~~~~~~~vlvEe~I~--G~E~~v 217 (346)
T 3se7_A 159 IP----TDQLTYPVFVKPARSG-----------SSFGVS-K---VAREEDLQGAVEAAREYDSKVLIEEAVI--GTEIGC 217 (346)
T ss_dssp CC----TTTCCSSEEEEESSCC-----------TTTTCE-E---ECSHHHHHHHHHHHTTTCSEEEEEECCC--SEEEEE
T ss_pred HH----HHhcCCCEEEEeCCCC-----------CCcCEE-E---ECCHHHHHHHHHHHHhCCCcEEEEeCcC--CEEEEE
Confidence 00 1124589999999986 355653 2 2222211110 01123477899999998 899999
Q ss_pred EEECCc---eeEEeeccCCCCCCce------eecCCC--CceeeEeeCCH----HHHHHHHHHHHHhCC-ccceeeEEee
Q psy10158 256 YTVGPD---YAHAEARKSPALDGKV------ERDSEG--KEIRYPVILSN----AEKLISRKVCLAFKQ-TVCGFDLLRA 319 (1266)
Q Consensus 256 YtVGp~---~vhAe~RKSPvvDG~V------RRN~hg--KEiRypV~LT~----eEK~IA~kaakAFGq-~VCGfDLLRs 319 (1266)
.++|.. .+....+..+. ++.+ ....+. .....|..|++ +-+++|.++++++|. .+++||++..
T Consensus 218 ~vl~~~~~~~~~~~~e~~~~-~~~~d~~q~~~~ky~~~~~~~~~pa~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~ 296 (346)
T 3se7_A 218 AVMGNGPELITGEVDQITLS-HGFFKIHQESTPESGSDNSAVTVPADISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLT 296 (346)
T ss_dssp EEEEETTEEEECCCEEECCC---------------CGGGSCEESSCCCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC
T ss_pred EEEecCCCeEEEeeEEEecC-CCCcCcccchhccccCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEe
Confidence 999874 33333444331 2221 222221 22344667887 457789999999999 6999999988
Q ss_pred C-CCeEEEeec------Cceec-----ccCchhhHHHHHHHHH
Q psy10158 320 N-GKSFVCDVN------GFSFV-----KNSNKYYDDSAKILGN 350 (1266)
Q Consensus 320 ~-ggsyVcDVN------GwSFV-----K~n~kYYDdcA~ILr~ 350 (1266)
. |.+||+||| +.|.+ .....|.+-|++||..
T Consensus 297 ~~g~~~vlEiN~rPG~t~~s~~p~~~~~~G~~~~~l~~~li~~ 339 (346)
T 3se7_A 297 EDGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRADVIDRLVSL 339 (346)
T ss_dssp TTSCEEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5 569999999 33422 1233455555555544
|
| >2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-12 Score=143.47 Aligned_cols=223 Identities=15% Similarity=0.197 Sum_probs=145.5
Q ss_pred ccceeeccccCCCcHH-HHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPLE-KAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~-KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++|+...-.+..+ .+..+++..+. ++-|+..+-.+.+||....++|+++|||+|++..+..... .
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~~----------~ 176 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDYVLLNEKNR----------A 176 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCCEEECTTTG----------G
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCEEEEeCCch----------H
Confidence 5899998766555543 45556666664 5558999999999999999999999999999999865310 0
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCC-ce--
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDG-TD-- 252 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~G-tD-- 252 (1266)
+... -..+..|+|+||..|. .|.|+. + +.+....-.. +...+.+..+|.||||+ | .+
T Consensus 177 ~~~~--~~~lg~PvvVKP~~g~-----------ss~Gv~-~---v~~~~el~~a~~~~~~~~~~vlVEe~I~--G~~E~s 237 (367)
T 2pvp_A 177 NALD--LMNFNFPFIVKPSNAG-----------SSLGVN-V---VKEEKELIYALDSAFEYSKEVLIEPFIQ--GVKEYN 237 (367)
T ss_dssp GHHH--HCCSCSCEEEEESSCC-----------TTTTCE-E---ESSTTSHHHHHHHHTTTCSCEEEEECCT--TCEEEE
T ss_pred HHHH--HhccCCCEEEEECCCC-----------CCCCEE-E---ECCHHHHHHHHHHHHhcCCcEEEEeCCC--CCceee
Confidence 1111 0124589999999986 355663 2 2222211110 00122467899999997 7 89
Q ss_pred -EEEEEECCceeEEeeccCCCCCCc--eeecCCCCc--eeeEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEeeCCC
Q psy10158 253 -VKVYTVGPDYAHAEARKSPALDGK--VERDSEGKE--IRYPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRANGK 322 (1266)
Q Consensus 253 -VKVYtVGp~~vhAe~RKSPvvDG~--VRRN~hgKE--iRypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs~gg 322 (1266)
+.|.+ +++.+....+..+ -.|. ++.+.+.++ ...|..|++ +-+++|.++++++|.. +|+||++..+|+
T Consensus 238 vi~v~v-~g~~~~~~~ei~~-~~~~~d~~~ky~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~g~ 315 (367)
T 2pvp_A 238 LAGCKI-KKDFCFSYIEEPN-KQEFLDFKQKYLDFSRNKAPKASLSNALEEQLKENFKKLYSDLFDGAIIRCDFFVIENE 315 (367)
T ss_dssp EEEEEE-TTEEEEEEEEETT-TTEEECCCCSSCCSCCCSCCCCCCCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEETTE
T ss_pred EEEEEE-CCEEEEEEEEEec-CCceEcccccccCCCeeEEecCCCCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEECCe
Confidence 88887 7764433324433 1232 234444443 345677885 4577899999999985 999999998889
Q ss_pred eEEEeecCc-eecccCchhhHHHHHHHHHHHHH
Q psy10158 323 SFVCDVNGF-SFVKNSNKYYDDSAKILGNMILR 354 (1266)
Q Consensus 323 syVcDVNGw-SFVK~n~kYYDdcA~ILr~~~l~ 354 (1266)
+||+|||-- .|- ....|-+-+.++..++..
T Consensus 316 ~~vlEiN~rpg~t--~~s~~p~~~~l~~~li~~ 346 (367)
T 2pvp_A 316 VYLNEINPIPGSL--ANYLFDDFKTTLENLAQS 346 (367)
T ss_dssp EEEEEEESSCGGG--GGGGSSSHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCC--cccccCCHHHHHHHHHhC
Confidence 999999972 331 112222455666666544
|
| >2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.8e-12 Score=140.52 Aligned_cols=208 Identities=12% Similarity=0.143 Sum_probs=130.3
Q ss_pred cccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCc-cccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPV-KHELVE 174 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~-~~~l~e 174 (1266)
..+|++++.+...+..+ .....++..+ |++-++..+..+.+||....++|+++|||+|++..+........ ...+
T Consensus 86 ~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~-- 163 (364)
T 2i87_A 86 QPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNIL-- 163 (364)
T ss_dssp SBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCEEEEEHHHHHHHHHHHH--
T ss_pred cCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEechhhcccchhHH--
Confidence 45799998764333332 3344455544 55567799999999999999999999999999998864210000 0000
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceE
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDV 253 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDV 253 (1266)
.+.+. .+..|+|+||..|. .|.|+. + +.+....... +...+.+..+|.||||+ |.++
T Consensus 164 -~~~~~----~~g~PvvvKP~~g~-----------~s~Gv~-~---v~~~~el~~a~~~~~~~~~~~lvEe~I~--G~E~ 221 (364)
T 2i87_A 164 -KLVND----KLNYPVFVKPANLG-----------SSVGIS-K---CNNEAELKEGIKEAFQFDRKLVIEQGVN--AREI 221 (364)
T ss_dssp -HHHHH----HCCSSEEEEESSCS-----------SCTTCE-E---ESSHHHHHHHHHHHHTTCSEEEEEECCC--CEEE
T ss_pred -HHHHH----hcCCCEEEEeCCCC-----------CCCCEE-E---ECCHHHHHHHHHHHHhcCCeEEEEeCcc--CeEE
Confidence 00111 13479999999986 355663 2 2222211100 00112467899999998 8999
Q ss_pred EEEEECCc---eeEEeeccCCCCCC--ceeecCCCCce--eeEeeCCH----HHHHHHHHHHHHhCC-ccceeeEEee-C
Q psy10158 254 KVYTVGPD---YAHAEARKSPALDG--KVERDSEGKEI--RYPVILSN----AEKLISRKVCLAFKQ-TVCGFDLLRA-N 320 (1266)
Q Consensus 254 KVYtVGp~---~vhAe~RKSPvvDG--~VRRN~hgKEi--RypV~LT~----eEK~IA~kaakAFGq-~VCGfDLLRs-~ 320 (1266)
.|.++|+. +++...+... .+ .++.+.+.++. ..|..|++ +-+++|.++++++|. .+++||++.. +
T Consensus 222 ~v~vl~~~~~~~~~~~e~~~~--~~~~~~~~k~~~g~~~~~~pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~ 299 (364)
T 2i87_A 222 EVAVLGNDYPEATWPGEVVKD--VAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTED 299 (364)
T ss_dssp EEEEEESSSCEECCCEEECCS--CCC-----------CCEESSCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTT
T ss_pred EEEEEcCCCcEEeeeEEEecC--CCcCCHHHcccCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEecC
Confidence 99999875 4444444321 12 13444444433 34556776 567899999999999 5999999997 5
Q ss_pred CCeEEEeecCc
Q psy10158 321 GKSFVCDVNGF 331 (1266)
Q Consensus 321 ggsyVcDVNGw 331 (1266)
|.+||+|||.-
T Consensus 300 g~~~viEiN~r 310 (364)
T 2i87_A 300 NQIYINETNAM 310 (364)
T ss_dssp CCEEEEEEESS
T ss_pred CCEEEEEEeCC
Confidence 77999999963
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.5e-11 Score=131.67 Aligned_cols=188 Identities=17% Similarity=0.220 Sum_probs=124.7
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.+|++|+.+. .++..+.++++..+..+.|+.....+.+||....++|+++|||+|++..+... +++
T Consensus 62 ~~d~v~~~~e--~~~~~~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~------------~~~ 127 (380)
T 3ax6_A 62 GSDVTTYDLE--HIDVQTLKKLYNEGYKIHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKLVKDL------------ESD 127 (380)
T ss_dssp TCSEEEESCS--CSCHHHHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEECSSH------------HHH
T ss_pred cCCEEEeccc--CCCHHHHHHHHHCCCeECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEeCCH------------HHH
Confidence 4788887653 34456667777777556799999999999999999999999999999987531 011
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTV 258 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtV 258 (1266)
+. .+..|+|+||..|. | .|.|+. +.+ +... +. ..++ ..+|.||||+. |.++.|.++
T Consensus 128 ~~----~~~~P~vvKp~~~~----y------~g~Gv~-~v~---~~~e-l~--~~~~--~~~lvEe~i~~-g~e~sv~~~ 183 (380)
T 3ax6_A 128 VR----EFGFPVVQKARKGG----Y------DGRGVF-IIK---NEKD-LE--NAIK--GETYLEEFVEI-EKELAVMVA 183 (380)
T ss_dssp HH----TTCSSEEEEESCCC---------------EE-EEC---SGGG-GG--GCCC--SSEEEEECCCE-EEEEEEEEE
T ss_pred HH----hcCCCEEEEecCCC----C------CCCCeE-EEC---CHHH-HH--HHhc--CCEEEEeccCC-CeeEEEEEE
Confidence 11 23479999999885 1 255663 333 2211 11 1222 78999999974 799999998
Q ss_pred CC---ceeE-EeeccC--CCCCCceeecCCCCceeeEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEeeC-CCeEEE
Q psy10158 259 GP---DYAH-AEARKS--PALDGKVERDSEGKEIRYPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRAN-GKSFVC 326 (1266)
Q Consensus 259 Gp---~~vh-Ae~RKS--PvvDG~VRRN~hgKEiRypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs~-ggsyVc 326 (1266)
+. +++. ...++- + ..|.. ...-.|..|++ +-+++|.++++++|.. +++||++... |++||+
T Consensus 184 ~~~~G~~~~~~~~~~~~~~-~~~~~------~~~~~p~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~g~~~vi 256 (380)
T 3ax6_A 184 RNEKGEIACYPVVEMYFDE-DANIC------DTVIAPARIEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVN 256 (380)
T ss_dssp ECSSCCEEEEEEEEEC---------------CEEEESCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTSCEEEE
T ss_pred ECCCCCEEEECCeeeeecc-cCCee------EEEECCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEE
Confidence 64 3332 111111 1 01211 12234566776 4567899999999994 9999999884 569999
Q ss_pred eecCc
Q psy10158 327 DVNGF 331 (1266)
Q Consensus 327 DVNGw 331 (1266)
|||.-
T Consensus 257 EiN~R 261 (380)
T 3ax6_A 257 EIAPR 261 (380)
T ss_dssp EEESS
T ss_pred EecCC
Confidence 99973
|
| >2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.1e-11 Score=127.73 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=119.7
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++|+.+....++ .+..+.++..+ |++.|+.....+++||....++|+++|||+|++..... ++ .
T Consensus 72 ~~d~vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~--------~~---~ 140 (331)
T 2pn1_A 72 GVTALLTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYATMA--------SF---E 140 (331)
T ss_dssp TCCEEEESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEESSHH--------HH---H
T ss_pred CCCEEEeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEEecHH--------Hh---h
Confidence 467888765444433 44455666554 57789999999999999999999999999999875311 01 0
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVY 256 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVY 256 (1266)
+.+. ...+..|+|+||..|. .|.|+. +.+. .. ++ ...+.....+|.||||+ |..+.|.
T Consensus 141 ~~~~--~~~~~~P~vvKp~~g~-----------g~~gv~-~v~~---~~-el--~~~~~~~~~~lvee~i~--G~e~~v~ 198 (331)
T 2pn1_A 141 EALA--AGEVQLPVFVKPRNGS-----------ASIEVR-RVET---VE-EV--EQLFSKNTDLIVQELLV--GQELGVD 198 (331)
T ss_dssp HHHH--TTSSCSCEEEEESBC-----------------------------------------CEEEEECCC--SEEEEEE
T ss_pred hhhh--cccCCCCEEEEeCCCC-----------CCCCeE-EeCC---HH-HH--HHHHHhCCCeEEEecCC--CcEEEEE
Confidence 1110 0123489999999997 356764 4332 11 11 11334467899999998 5777776
Q ss_pred EEC----CceeEEeeccCCCCCCceeecCCCCcee-eEeeCCHHHHHHHHHHHHHhCC-ccceeeEEeeCCCeEEEeecC
Q psy10158 257 TVG----PDYAHAEARKSPALDGKVERDSEGKEIR-YPVILSNAEKLISRKVCLAFKQ-TVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 257 tVG----p~~vhAe~RKSPvvDG~VRRN~hgKEiR-ypV~LT~eEK~IA~kaakAFGq-~VCGfDLLRs~ggsyVcDVNG 330 (1266)
+++ ++++++..|.. +. ..+|... .+..+.++-+++|.++++++|. .+++||++..+|++||+|||.
T Consensus 199 ~~~d~~~G~~~~~~~~~~------~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~lg~~G~~~vd~~~~~g~~~~iEiN~ 270 (331)
T 2pn1_A 199 AYVDLISGKVTSIFIKEK------LT--MRAGETDKSRSVLRDDVFELVEHVLDGSGLVGPLDFDLFDVAGTLYLSEINP 270 (331)
T ss_dssp EEECTTTCCEEEEEEEEE------EE--EETTEEEEEEEECCHHHHHHHHHHHTTTCCCEEEEEEEEEETTEEEEEEEES
T ss_pred EEEecCCCeEEEEEEEEE------EE--ecCCceeEeEEeccHHHHHHHHHHHHHhCCcceEEEEEEEcCCCEEEEEEeC
Confidence 665 56665554432 11 0122222 2335788899999999999999 689999998889999999997
|
| >3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.2e-11 Score=136.40 Aligned_cols=276 Identities=11% Similarity=0.107 Sum_probs=163.9
Q ss_pred eEEEEEEec----CCccCChhHHHHHHHHhhcCcEEEEEec-ccc---cc-cc-------cccc----------------
Q psy10158 50 QVIVGVCAM----AKKSQSKPMKEILTRLEEFEFIKMIVFS-EET---IQ-KP-------VDEW---------------- 97 (1266)
Q Consensus 50 ~i~iGVCAM----d~Ka~SkPMr~IL~RL~~~g~f~viiF~-dkv---IL-e~-------vE~W---------------- 97 (1266)
+.+|+|.+= +.-+.-+--++|++-|.+.| ++++.++ ++. .+ .+ ...|
T Consensus 37 ~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~-~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (383)
T 3k3p_A 37 KETLVLLYGGRSAERDVSVLSAESVMRAINYDN-FLVKTYFITQAGDFIKTQEFDSQPSETDKLMTNDTIIASQKIKPSD 115 (383)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTT-EEEEEEEECTTSCEEEEEEESSCCC--CCCCCTTSCCGGGEECGGG
T ss_pred CCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcC-CEEEEEEecCCCCEEecccccccccccccccccccccccccccccc
Confidence 346777652 22223355678999887765 5666655 321 11 10 0123
Q ss_pred --cccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcC-CCCCCeEEeccCCCCCccccc
Q psy10158 98 --PIVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEG-IEIPRYAVLDRESPDPVKHEL 172 (1266)
Q Consensus 98 --P~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~g-Ip~P~tv~~~rd~~~~~~~~l 172 (1266)
..+|++++-..-.+-. -....++++.+ ||+-|+..+.++.+||..+.++|+++| ||+|++..+.+... . ...+
T Consensus 116 ~~~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~~~~~~~~~-~-~~~~ 193 (383)
T 3k3p_A 116 IYEEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYVALIEGEP-L-ESKL 193 (383)
T ss_dssp GCCTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCEEEEETTSC-H-HHHH
T ss_pred cccCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCEEEEeCccc-h-hHHH
Confidence 1478888876555544 25566777666 566789999999999999999999999 99999999975321 0 0000
Q ss_pred cccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCc
Q psy10158 173 VESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGT 251 (1266)
Q Consensus 173 ~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~Gt 251 (1266)
.+.. ..+..|+|+||..|. .|.|+. + +.+.......- ...+.+..+|.||||+ |.
T Consensus 194 ---~~~~----~~lg~PvvVKP~~gg-----------ss~GV~-~---v~~~~el~~al~~a~~~~~~vlVEe~I~--G~ 249 (383)
T 3k3p_A 194 ---AEVE----EKLIYPVFVKPANMG-----------SSVGIS-K---AENRTDLKQAIALALKYDSRVLIEQGVD--AR 249 (383)
T ss_dssp ---HHHH----HHCCSSEEEEECC-----------------CE-E---ESSHHHHHHHHHHHHHHCSEEEEEECCC--SE
T ss_pred ---HHHH----HhcCCCEEEEeCCCC-----------CCCCEE-E---ECCHHHHHHHHHHHHhCCCeEEEEcCCC--Ce
Confidence 0011 124589999999986 355653 2 32222111100 1123467899999998 89
Q ss_pred eEEEEEECCceeEE---eeccCCCCCCc--eeecCCCCc--eeeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEEee
Q psy10158 252 DVKVYTVGPDYAHA---EARKSPALDGK--VERDSEGKE--IRYPVILSNAE----KLISRKVCLAFKQT-VCGFDLLRA 319 (1266)
Q Consensus 252 DVKVYtVGp~~vhA---e~RKSPvvDG~--VRRN~hgKE--iRypV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs 319 (1266)
++.|.++|+....+ ..+... .+. +++.-+.++ ...|..|+++. +++|.++++++|.. +++||++..
T Consensus 250 E~~v~vl~d~~~~~~~~~ei~~~--~~~~d~~~ky~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~ 327 (383)
T 3k3p_A 250 EIEVGILGNTDVKTTLPGEIVKD--VAFYDYEAKYIDNKITMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLT 327 (383)
T ss_dssp EEEEEEEESSSCEECCCEEEC-------------------CEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred EEEEEEEeCCCeeEEeeEEEecC--CCccchhhcccCCCeeEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEE
Confidence 99999998753322 222211 121 233332333 33355677654 68899999999997 999999987
Q ss_pred -CCCeEEEeecC---c---eec-----ccCchhhHHHHHHHHHHHHH
Q psy10158 320 -NGKSFVCDVNG---F---SFV-----KNSNKYYDDSAKILGNMILR 354 (1266)
Q Consensus 320 -~ggsyVcDVNG---w---SFV-----K~n~kYYDdcA~ILr~~~l~ 354 (1266)
+|.+||+|||- + |.+ .....|-+-|.+||..-+-|
T Consensus 328 ~~g~~~vlEINtrPG~t~~S~~p~~~~a~Gi~~~~li~~li~~a~~r 374 (383)
T 3k3p_A 328 EDGKVYLNELNTMPGFTQWSMYPLLWENMGLSYSVLIEELVSLAKEM 374 (383)
T ss_dssp TTCCEEEEEEESSCCCC--CHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 56799999993 2 322 12345666677777665543
|
| >3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=134.60 Aligned_cols=194 Identities=14% Similarity=0.141 Sum_probs=128.0
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.+|++++.+. +++..++++++..+ ++.|+.....+.+||....++|+++|||+|++..+.... ++ .++
T Consensus 59 ~~d~v~~~~e--~~~~~~~~~l~~~g-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~------~~---~~~ 126 (369)
T 3aw8_A 59 GLALVTYEFE--NVPVEAARRLEGRL-PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGPE------DL---EEG 126 (369)
T ss_dssp TCSEEEECCT--TCCHHHHHHHHHHS-CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEEEESSHH------HH---HHH
T ss_pred CCCEEEECCC--CcCHHHHHHHHHcC-CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCceeeCCHH------HH---HHH
Confidence 5888887764 44567777888788 888999999999999999999999999999998885311 01 111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTV 258 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtV 258 (1266)
+. .+..|+|+||..|. | .|.|+. +.+ +.......-..+ .+..+|.||||+. |.++.|.++
T Consensus 127 ~~----~~g~P~vvKp~~~~----~------~g~Gv~-~v~---~~~el~~~~~~~-~~~~~lvEe~i~~-g~e~sv~~~ 186 (369)
T 3aw8_A 127 LK----RVGLPALLKTRRGG----Y------DGKGQA-LVR---TEEEALEALKAL-GGRGLILEGFVPF-DREVSLLAV 186 (369)
T ss_dssp HT----TTCSSEEEEECCC----------------EE-EEC---SHHHHHHHHTTT-CSSSEEEEECCCC-SEEEEEEEE
T ss_pred HH----HcCCCEEEEEcCCC----C------CcceEE-EEC---CHHHHHHHHHhc-CCCcEEEEEcCCC-CEEEEEEEE
Confidence 10 13489999999986 1 255663 333 221110000011 1578999999975 889999988
Q ss_pred CC---ceeEEeeccCCCCCCceeecCCCCceeeEee-CCH----HHHHHHHHHHHHhCCc-cceeeEEeeCCCeEEEeec
Q psy10158 259 GP---DYAHAEARKSPALDGKVERDSEGKEIRYPVI-LSN----AEKLISRKVCLAFKQT-VCGFDLLRANGKSFVCDVN 329 (1266)
Q Consensus 259 Gp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~-LT~----eEK~IA~kaakAFGq~-VCGfDLLRs~ggsyVcDVN 329 (1266)
+. +++ +..+ ...+.++..+...-.|.. |++ +-+++|.++++++|.. ++++|++...|++||+|||
T Consensus 187 ~d~~G~~~-~~~~-----~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~~~~viEiN 260 (369)
T 3aw8_A 187 RGRTGEVA-FYPL-----VENRHWGGILRLSLAPAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVGEELLFNEMA 260 (369)
T ss_dssp ECTTSCEE-ECCC-----EEEEEETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEE
T ss_pred ECCCCCEE-EECC-----eeeeeeCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECCcEEEEEEe
Confidence 73 333 2211 111222222222233444 776 3367889999999997 9999999988889999999
Q ss_pred C
Q psy10158 330 G 330 (1266)
Q Consensus 330 G 330 (1266)
-
T Consensus 261 ~ 261 (369)
T 3aw8_A 261 P 261 (369)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-11 Score=134.31 Aligned_cols=197 Identities=14% Similarity=0.144 Sum_probs=126.0
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.+|++|+. +.-.++..+.+.++..+. ..|+.....+++||....++|+++|||+|++..+.... +..+.
T Consensus 71 ~~d~v~~~-~~~~~~~~~a~~~~~~gl-~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~---------~~~~~ 139 (403)
T 4dim_A 71 NLDGAATC-CLDTGIVSLARICDKENL-VGLNEEAAIMCGDKYKMKEAFKKYNVNTARHFVVRNEN---------ELKNA 139 (403)
T ss_dssp CCSEEECC-SCSTTHHHHHHHHHHHTC-SSCCHHHHHHHHCHHHHHHHHHHHTCCCCCEECCCSHH---------HHHHH
T ss_pred CCCEEEeC-CcchhHHHHHHHHHHcCc-CCCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEEeCCHH---------HHHHH
Confidence 47999986 334455444455555454 47899999999999999999999999999998775310 01111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc---ccCcceEEeeccCCCCceEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV---RKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v---r~~gSyIYEEFI~t~GtDVKV 255 (1266)
+. .+..|+|+||..|. .|.|+. +.+ +....-..-..+ ..++.+|.||||+-..-+|.+
T Consensus 140 ~~----~~g~P~vvKp~~g~-----------gg~Gv~-~v~---~~~el~~~~~~~~~~~~~~~~lvEe~i~g~e~sv~~ 200 (403)
T 4dim_A 140 LE----NLKLPVIVKATDLQ-----------GSKGIY-IAK---KEEEAIDGFNETMNLTKRDYCIVEEFIEGYEFGAQA 200 (403)
T ss_dssp HH----TSCSSEEEECSCC----------------CE-EES---SHHHHHHHHHHHHHHCSSSCCEEEECCCSEEEEEEE
T ss_pred Hh----cCCCCEEEEECCCC-----------CCCCEE-EEC---CHHHHHHHHHHHHhcCcCCcEEEEEccCCcEEEEEE
Confidence 11 13489999999986 355653 332 211110000011 135789999999844466777
Q ss_pred EEECCceeEEeeccCCCCCCceeecCC-CC--ceeeEeeCCHHH----HHHHHHHHHHhCCc--cceeeEEeeCCCeEEE
Q psy10158 256 YTVGPDYAHAEARKSPALDGKVERDSE-GK--EIRYPVILSNAE----KLISRKVCLAFKQT--VCGFDLLRANGKSFVC 326 (1266)
Q Consensus 256 YtVGp~~vhAe~RKSPvvDG~VRRN~h-gK--EiRypV~LT~eE----K~IA~kaakAFGq~--VCGfDLLRs~ggsyVc 326 (1266)
++.++++...... +.+..+.+ +. +...|..|+++. +++|.++++++|.. +++||++..+|++||+
T Consensus 201 ~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~p~~l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~~~~~~~i 274 (403)
T 4dim_A 201 FVYKNDVLFVMPH------GDETYMSHTAVPVGHYVPLDVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILKDNEVYII 274 (403)
T ss_dssp EEETTEEEEEEEE------EEEEEESSSEEEEEEEESCCSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEETTEEEEE
T ss_pred EEECCEEEEEEEe------cceeccCCCCcceeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEECCcEEEE
Confidence 7777776543311 11111111 11 233566788866 57899999999987 6899999999999999
Q ss_pred eecCc
Q psy10158 327 DVNGF 331 (1266)
Q Consensus 327 DVNGw 331 (1266)
|||.-
T Consensus 275 EiN~R 279 (403)
T 4dim_A 275 ELTGR 279 (403)
T ss_dssp EEESS
T ss_pred EEcCC
Confidence 99963
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=3.2e-11 Score=134.32 Aligned_cols=193 Identities=15% Similarity=0.190 Sum_probs=125.8
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHH-HhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALL-EKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL-~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.+|++++.+. ++...+.++++..+.++.|+.....+.+||....++| +++|||+|++..+.... +..+
T Consensus 82 ~~d~V~~~~e--~~~~~~~~~l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~~~~~~---------~~~~ 150 (433)
T 2dwc_A 82 KPDAIIPEIE--AINLDALFEFEKDGYFVVPNARATWIAMHRERLRETLVKEAKVPTSRYMYATTLD---------ELYE 150 (433)
T ss_dssp CCSEEEECSS--CSCHHHHHHHHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEEESSHH---------HHHH
T ss_pred CCCEEEECcc--cCCHHHHHHHHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeEeCCHH---------HHHH
Confidence 5899999874 4445666777777767789999999999999999999 89999999998885310 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-----cCcceEEeeccCCCCce
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-----KSGSFIYEDFMPTDGTD 252 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-----~~gSyIYEEFI~t~GtD 252 (1266)
++. .+..|+|+||..|. .|.|+. +.+ +....-..-..+. .+..+|.||||+. |.+
T Consensus 151 ~~~----~~g~P~vvKp~~g~-----------gg~Gv~-~v~---~~~el~~~~~~~~~~~~~~~~~~lvEe~i~~-g~E 210 (433)
T 2dwc_A 151 ACE----KIGYPCHTKAIMSS-----------SGKGSY-FVK---GPEDIPKAWEEAKTKARGSAEKIIVEEHIDF-DVE 210 (433)
T ss_dssp HHH----HHCSSEEEEECCC-----------------E-EEC---SGGGHHHHHHC---------CCEEEEECCCC-SEE
T ss_pred HHH----hcCCCEEEEECCCc-----------CCCCeE-EEC---CHHHHHHHHHHHHhhcccCCCCEEEEccCCC-Cee
Confidence 111 13489999999886 355663 333 2211100000111 2578999999975 788
Q ss_pred EEEEEEC-----CceeEEe----eccCCCCCCceeecCCCCceeeEeeCCHH----HHHHHHHHHHHhCC-ccceeeEEe
Q psy10158 253 VKVYTVG-----PDYAHAE----ARKSPALDGKVERDSEGKEIRYPVILSNA----EKLISRKVCLAFKQ-TVCGFDLLR 318 (1266)
Q Consensus 253 VKVYtVG-----p~~vhAe----~RKSPvvDG~VRRN~hgKEiRypV~LT~e----EK~IA~kaakAFGq-~VCGfDLLR 318 (1266)
+.|.+++ ++.++.. ..+- .+|... +.-.|..|+++ -+++|.++++++|. .+++||++.
T Consensus 211 ~sv~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~------~~~~p~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~ 282 (433)
T 2dwc_A 211 VTELAVRHFDENGEIVTTFPKPVGHYQ--IDGDYH------ASWQPAEISEKAEREVYRIAKRITDVLGGLGIFGVEMFV 282 (433)
T ss_dssp EEECCEEEECTTSCEEEEEECCEEEEE--SSSSEE------EEEESCCCCHHHHHHHHHHHHHHHHHHCSSEECEEEEEE
T ss_pred EEEEEEecccCCCCEeEEEecccceEE--EcCEEE------EEEcCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEE
Confidence 8888764 3322211 1111 133332 22246678874 36789999999998 799999999
Q ss_pred eCCCeEEEeecC
Q psy10158 319 ANGKSFVCDVNG 330 (1266)
Q Consensus 319 s~ggsyVcDVNG 330 (1266)
..+++||+|||.
T Consensus 283 ~~~~~~viEiN~ 294 (433)
T 2dwc_A 283 KGDKVWANEVSP 294 (433)
T ss_dssp ETTEEEEEEEES
T ss_pred eCCcEEEEEEeC
Confidence 988999999996
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-11 Score=132.89 Aligned_cols=195 Identities=19% Similarity=0.223 Sum_probs=128.5
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHH-HhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALL-EKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL-~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.+|++++.+. ++...+.++++..+.++.|+.....+.+||....++| +++|||+|++..+.... +..+
T Consensus 74 ~~d~v~~~~e--~~~~~~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~~~~~~~---------~~~~ 142 (391)
T 1kjq_A 74 KPHYIVPEIE--AIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLPTSTYRFADSES---------LFRE 142 (391)
T ss_dssp CCSEEEECSS--CSCHHHHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEEEESSHH---------HHHH
T ss_pred CCCEEEECCC--cCCHHHHHHHHhCCCCcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCeeeeCCHH---------HHHH
Confidence 5899998774 4444566777777777789999999999999999999 89999999998875310 0111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-----cCcceEEeeccCCCCc
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-----KSGSFIYEDFMPTDGT 251 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-----~~gSyIYEEFI~t~Gt 251 (1266)
++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+. .+..+|.||||+. |.
T Consensus 143 ~~~----~~g~P~vvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~lvEe~i~~-g~ 201 (391)
T 1kjq_A 143 AVA----DIGYPCIVKPVMSS-----------SGKGQT-FIR---SAE-QLAQAWKYAQQGGRAGAGRVIVEGVVKF-DF 201 (391)
T ss_dssp HHH----HHCSSEEEEESCC--------------CCCE-EEC---SGG-GHHHHHHHHHHHSGGGCCCEEEEECCCC-SE
T ss_pred HHH----hcCCCEEEEeCCCC-----------CCCCeE-EEC---CHH-HHHHHHHHHHhhcccCCCCEEEEEecCC-Ce
Confidence 111 13489999999886 366663 333 211 11100 0111 2578999999985 88
Q ss_pred eEEEEEECCc-eeEEeeccCCCCCCceeecCCCCceeeEeeCCHH----HHHHHHHHHHHhCC-ccceeeEEeeCCCeEE
Q psy10158 252 DVKVYTVGPD-YAHAEARKSPALDGKVERDSEGKEIRYPVILSNA----EKLISRKVCLAFKQ-TVCGFDLLRANGKSFV 325 (1266)
Q Consensus 252 DVKVYtVGp~-~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~e----EK~IA~kaakAFGq-~VCGfDLLRs~ggsyV 325 (1266)
++.|.+++.. -++. .++. +.++.+-+..+.-.|..|+++ -+++|.++++++|. .+++||++...+++||
T Consensus 202 E~sv~~~~~~~g~~~----~~~~-~~~~~~~~~~~~~~p~~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~~~~~v 276 (391)
T 1kjq_A 202 EITLLTVSAVDGVHF----CAPV-GHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIF 276 (391)
T ss_dssp EEEEEEEEETTEEEE----CCCE-EEEEETTEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEETTEEEE
T ss_pred EEEEEEEEeCCCeEE----ccCc-ceEEECCEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCcEEE
Confidence 9999887531 1111 1111 112211111122236678864 35789999999998 7999999999889999
Q ss_pred EeecC
Q psy10158 326 CDVNG 330 (1266)
Q Consensus 326 cDVNG 330 (1266)
+|||.
T Consensus 277 iEiN~ 281 (391)
T 1kjq_A 277 SEVSP 281 (391)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99996
|
| >3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.18 E-value=9.8e-11 Score=130.64 Aligned_cols=229 Identities=14% Similarity=0.159 Sum_probs=142.1
Q ss_pred cccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
..+|++++-..-.+-.+ ....++++.+ ||+-++..+-++..||....++|+++|||+|++..+.+... .
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~---------~ 167 (372)
T 3tqt_A 97 YSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHTLSPRDA---------T 167 (372)
T ss_dssp ECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCCEEECTTSC---------C
T ss_pred cCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEEEechhh---------h
Confidence 35899988775555453 5667777776 56668899999999999999999999999999999975321 0
Q ss_pred CCeEEEcCeEecCC-EEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceE
Q psy10158 176 EDHVEVNGIVFNKP-FVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDV 253 (1266)
Q Consensus 176 ~D~I~v~G~~~~kP-fVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDV 253 (1266)
...+.---..+..| +|+||..|. .|.|+. ++.|....... +...+.+..+|.||||+ |.++
T Consensus 168 ~~~~~~~~~~lg~P~vvVKP~~gg-----------ss~Gv~----~v~~~~eL~~a~~~a~~~~~~vlVEe~I~--G~E~ 230 (372)
T 3tqt_A 168 EGVYQRLLDRWGTSELFVKAVSLG-----------SSVATL----PVKTETEFTKAVKEVFRYDDRLMVEPRIR--GREI 230 (372)
T ss_dssp TTHHHHHHHHC---CEEEEESSCC-----------SGGGEE----EECSHHHHHHHHHHHTTTCSCEEEEECCC--SEEE
T ss_pred hhHHHHHHHhcCCCeEEEEECCCC-----------CCCCEE----EECCHHHHHHHHHHHHhcCCCEEEECCCC--CEEE
Confidence 00000000124589 999999885 355553 23332211110 01123477899999998 8999
Q ss_pred EEEEECCceeEE--eeccCCCCCC--ceeecCCCC---ceeeEeeCCHH----HHHHHHHHHHHhCCc-cceeeEEee-C
Q psy10158 254 KVYTVGPDYAHA--EARKSPALDG--KVERDSEGK---EIRYPVILSNA----EKLISRKVCLAFKQT-VCGFDLLRA-N 320 (1266)
Q Consensus 254 KVYtVGp~~vhA--e~RKSPvvDG--~VRRN~hgK---EiRypV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs-~ 320 (1266)
.|-++|+....+ ..+.-| .++ .++..-+.+ ....|..|+++ =+++|.++++++|.. +|+||++.. +
T Consensus 231 ~v~vl~~~~~~~~~~~ei~~-~~~~~d~~~ky~~g~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~d 309 (372)
T 3tqt_A 231 ECAVLGNGAPKASLPGEIIP-HHDYYSYDAKYLDPNGATTTTSVDLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPN 309 (372)
T ss_dssp EEEEEESSSCEECCCEEEEC-C---------------CEEESCCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTT
T ss_pred EEEEEeCCCceEeeeEEEec-CCCccchhhcccCCCceEEEeCCCCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeCC
Confidence 999999873221 111111 012 133333322 23345667764 467899999999997 999999987 4
Q ss_pred CCeEEEeec---Cc---eec-----ccCchhhHHHHHHHHHHHH
Q psy10158 321 GKSFVCDVN---GF---SFV-----KNSNKYYDDSAKILGNMIL 353 (1266)
Q Consensus 321 ggsyVcDVN---Gw---SFV-----K~n~kYYDdcA~ILr~~~l 353 (1266)
|.+||+||| || |.+ ..-..|-+-|.+||..-+-
T Consensus 310 g~~~vlEINt~PG~t~~S~~p~~~~~~G~~~~~li~~li~~a~~ 353 (372)
T 3tqt_A 310 NKVLVNEINTIPGFTNISMYPKMWEASGLPCPNLLDQLIELAID 353 (372)
T ss_dssp CCEEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCCcCccCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 779999999 53 333 2233555666777665543
|
| >2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.9e-11 Score=135.48 Aligned_cols=198 Identities=18% Similarity=0.174 Sum_probs=124.9
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
+|++++.+. .++ ..+.+.++..+ |+.-|+.....+.+||....++|+++|||+|++..+.... +..+
T Consensus 62 ~d~v~~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~---------~~~~ 130 (417)
T 2ip4_A 62 IDLTLVGPE--APLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYRVFREPL---------EALA 130 (417)
T ss_dssp CCEEEECSS--HHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEEEESSHH---------HHHH
T ss_pred CCEEEECCc--hHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCeeeeCCHH---------HHHH
Confidence 566666432 232 34555565555 5555999999999999999999999999999998875310 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc---ccCcceEEeeccCCCCceE
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV---RKSGSFIYEDFMPTDGTDV 253 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v---r~~gSyIYEEFI~t~GtDV 253 (1266)
++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+ ..+..+|.||||+ |.++
T Consensus 131 ~~~----~~~~P~vvKp~~~~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~lvEe~i~--g~E~ 188 (417)
T 2ip4_A 131 YLE----EVGVPVVVKDSGLA-----------AGKGVT-VAF---DLH-QAKQAVANILNRAEGGEVVVEEYLE--GEEA 188 (417)
T ss_dssp HHH----HHCSSEEEECTTSC-----------SSTTCE-EES---CHH-HHHHHHHHHTTSSSCCCEEEEECCC--SCEE
T ss_pred HHH----HcCCCEEEEECCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHhhccCCeEEEEECcc--CcEE
Confidence 111 13489999999986 366663 333 211 11100 011 1237899999998 8899
Q ss_pred EEEEEC-CceeEEe--ecc-CCCCCCceeecCCCCceeeEeeCCHHHH-----HHHHHHHHHh---CC---ccceeeEEe
Q psy10158 254 KVYTVG-PDYAHAE--ARK-SPALDGKVERDSEGKEIRYPVILSNAEK-----LISRKVCLAF---KQ---TVCGFDLLR 318 (1266)
Q Consensus 254 KVYtVG-p~~vhAe--~RK-SPvvDG~VRRN~hgKEiRypV~LT~eEK-----~IA~kaakAF---Gq---~VCGfDLLR 318 (1266)
.|.+++ ++.+++. .|. -+..++...-|..+-+.-.|..|+++.. ++|.++++++ |. .+++||++.
T Consensus 189 sv~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~ 268 (417)
T 2ip4_A 189 TVLALTDGETILPLLPSQDHKRLLDGDQGPMTGGMGAVAPYPMDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLML 268 (417)
T ss_dssp EEEEEESSSCEEECCCBEECCEEETTTEEEECSCSEEEESCCCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEE
T ss_pred EEEEEEeCCEEEEcchheechhhccCCCCCcCCCCeeeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEE
Confidence 998884 3444543 232 2223443333444444556667888643 3477778876 33 467799999
Q ss_pred eCCCeEEEeecC
Q psy10158 319 ANGKSFVCDVNG 330 (1266)
Q Consensus 319 s~ggsyVcDVNG 330 (1266)
..+++||+|||.
T Consensus 269 ~~~g~~viEiN~ 280 (417)
T 2ip4_A 269 TREGPKVLEFNA 280 (417)
T ss_dssp CSSCEEEEEEES
T ss_pred eCCCeEEEEEec
Confidence 876699999996
|
| >3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3.1e-10 Score=125.13 Aligned_cols=229 Identities=14% Similarity=0.205 Sum_probs=144.6
Q ss_pred cccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 98 PIVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
..+|++++-..-.+-. .....++++.+ ||+-++..+-.+.+||..+.++|+++|||+|++..+...... .
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~~~--------~ 168 (364)
T 3i12_A 97 PTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNRH--------A 168 (364)
T ss_dssp CCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEEETTTGG--------G
T ss_pred CCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEccccc--------h
Confidence 3579888874322223 25667777766 566678899999999999999999999999999999753200 0
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVK 254 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVK 254 (1266)
.+...+ -..+..|+|+||..|. .|.|+. + +.+....-.. +.....+..+|.||||+ |.++.
T Consensus 169 ~~~~~~-~~~lg~PvvVKP~~gg-----------ss~Gv~-~---v~~~~el~~a~~~a~~~~~~vlVEe~I~--G~E~~ 230 (364)
T 3i12_A 169 FSFAEV-ESRLGLPLFVKPANQG-----------SSVGVS-K---VANEAQYQQAVALAFEFDHKVVVEQGIK--GREIE 230 (364)
T ss_dssp CCHHHH-HHHHCSSEEEEETTCC-----------TTTTCE-E---ESSHHHHHHHHHHHHHHCSEEEEEECCC--SEEEE
T ss_pred hhHHHH-HHhcCCCEEEEECCCC-----------CCcCeE-E---eCCHHHHHHHHHHHHhcCCcEEEEcCcC--CeEEE
Confidence 011000 0123489999999886 355653 2 2222211110 01123467899999997 69999
Q ss_pred EEEECCce---eEEeeccCCCCCCceeec---CCC--CceeeEeeCCHH----HHHHHHHHHHHhCC-ccceeeEEee-C
Q psy10158 255 VYTVGPDY---AHAEARKSPALDGKVERD---SEG--KEIRYPVILSNA----EKLISRKVCLAFKQ-TVCGFDLLRA-N 320 (1266)
Q Consensus 255 VYtVGp~~---vhAe~RKSPvvDG~VRRN---~hg--KEiRypV~LT~e----EK~IA~kaakAFGq-~VCGfDLLRs-~ 320 (1266)
|.++|+.. ....... | .++.+... ..+ .....|..|+++ =+++|.++++++|. .+++||++.. +
T Consensus 231 v~vl~~~~~~~~~~~ei~-~-~~~~~~~~~ky~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~ 308 (364)
T 3i12_A 231 CAVLGNDNPQASTCGEIV-L-NSEFYAYDTKYIDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTAD 308 (364)
T ss_dssp EEEEESSSCEEEEEEEEE-C-CTTCC--TTTTSGGGGCEEESSCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTT
T ss_pred EEEEeCCCceEeeeEEEe-c-CCCccCHHHcccCCCceEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEecC
Confidence 99998763 2222211 2 12322221 122 233345667764 46788999999999 5999999987 6
Q ss_pred CCeEEEeec------Cceec-----ccCchhhHHHHHHHHHHHHH
Q psy10158 321 GKSFVCDVN------GFSFV-----KNSNKYYDDSAKILGNMILR 354 (1266)
Q Consensus 321 ggsyVcDVN------GwSFV-----K~n~kYYDdcA~ILr~~~l~ 354 (1266)
|.+||+||| +.|.+ .....|-+-|.+||..-+-+
T Consensus 309 g~~~vlEiN~~Pg~t~~s~~p~~~~a~G~~~~~l~~~li~~a~~~ 353 (364)
T 3i12_A 309 NEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLIELALER 353 (364)
T ss_dssp CCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeCCCCCCCCCHHHHHHHHhCcCHHHHHHHHHHHHHHH
Confidence 779999999 22432 23456777777777765543
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=125.58 Aligned_cols=176 Identities=13% Similarity=0.148 Sum_probs=124.8
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.||++++.|..-..+..+.+.++....++.++..+..+.+||.+..++|+++|||+|.+..
T Consensus 63 ~~D~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~~------------------- 123 (363)
T 4ffl_A 63 RVDAVLPVNENLACIEFLNSIKEKFSCPVLFDFEAYRISRDKKKSKDYFKSIGVPTPQDRP------------------- 123 (363)
T ss_dssp SSSEEEECCCCHHHHHHHHHHGGGCSSCBCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBSC-------------------
T ss_pred CCCEEEECCCChhHHHHHHHHHHHCCCccCCCHHHHHHhhCHHHHHHHHHhcCCCCCCcee-------------------
Confidence 4899998875322234444555666677789999999999999999999999999997521
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTV 258 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtV 258 (1266)
+..|+|+||..|. .|.|++ +.+ |.. ........++.||||. |..+-|.++
T Consensus 124 -------ig~P~vvKp~~g~-----------g~~gv~-~v~---~~~------~~~~~~~~~~~ee~i~--g~e~sv~~~ 173 (363)
T 4ffl_A 124 -------SKPPYFVKPPCES-----------SSVGAR-IIY---DDK------DLEGLEPDTLVEEYVE--GEVVSLEVV 173 (363)
T ss_dssp -------SSSCEEEECSSCC-----------TTTTCE-EEC---------------CCCTTCEEEECCC--SEEEEEEEE
T ss_pred -------cCCCEEEEECCCC-----------CCcCeE-Eec---cHH------Hhhhhccchhhhhhcc--CcEEEEEEE
Confidence 2489999999886 355664 333 211 1223466789999996 666666666
Q ss_pred CC--cee-EEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHhCCc-cceeeEEeeCCCeEEEeecC
Q psy10158 259 GP--DYA-HAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFKQT-VCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 259 Gp--~~v-hAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAFGq~-VCGfDLLRs~ggsyVcDVNG 330 (1266)
+. .++ +...+.. ..+..+...-.|..+.++-+++|.++++++|.. +++||++...+++||+|||-
T Consensus 174 ~d~~~~~~~~~~~~~-------~~~~~~~~~~~p~~~~~~~~~~a~~~~~~l~~~G~~~vef~~~~~~~~viEiN~ 242 (363)
T 4ffl_A 174 GDGSHFAVVKETLVH-------IDETYDCHMVTPLPANPLFRQISHDLAANLPLKGIMDVEAIFGPKGLRVIEIDA 242 (363)
T ss_dssp EESSCEEECCCEEEE-------ECTTSCEEEEEECCCCHHHHHHHHHHHHTTTCEEEEEEEEEEETTEEEEEEEEC
T ss_pred EECCeEEEEEEEEec-------cCCcccceeecchhHHHHHHHHHHHHHHhCCccceeeeeeEEeCCeEEEEEEeC
Confidence 43 222 2222221 223344455667788899999999999999986 99999999999999999997
|
| >1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A | Back alignment and structure |
|---|
Probab=99.12 E-value=8.3e-09 Score=116.05 Aligned_cols=61 Identities=33% Similarity=0.284 Sum_probs=52.9
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccc---cccceEEecCchhHHHHHHHHHHHhhcc
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF---RHDLKIYASDEGRVQMTAAAFAKGLLAL 590 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~---rhDlKIYSSdEgRVq~TAaaFAkglL~l 590 (1266)
.|+||..|..|..+||+.+|..|.. .||| ...| .+++.|+|++-.|+.+||++|+.||.--
T Consensus 44 ~g~LT~~G~~~~~~lG~~lr~ry~~-----~~ll--~~~~~p~~~~v~v~st~~~RT~~SA~~~l~GlfP~ 107 (410)
T 1dkq_A 44 LGWLTPRGGELIAYLGHYQRQRLVA-----DGLL--AKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPD 107 (410)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHH-----TTSS--CSSSCCCTTTEEEEECSSHHHHHHHHHHHHHHSTT
T ss_pred CCccchHHHHHHHHHHHHHHHHHHh-----cCCC--ccccCCCcceEEEEeCCcHHHHHHHHHHHhhcCCC
Confidence 5899999999999999999987852 2564 5666 3799999999999999999999999853
|
| >2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-09 Score=122.25 Aligned_cols=62 Identities=31% Similarity=0.307 Sum_probs=52.0
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcc-ccc-ccceEEecCchhHHHHHHHHHHHhhccc
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHS-TFR-HDLKIYASDEGRVQMTAAAFAKGLLALE 591 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhs-t~r-hDlKIYSSdEgRVq~TAaaFAkglL~lE 591 (1266)
.|+||+.|+.|..+||+.||..|+. .+|| .. .|- .++.|+||+-.|+++||++|+.||....
T Consensus 53 ~g~LT~~G~~q~~~lG~~lr~rY~~-----~~ll--~~~~~~~~~v~~rst~~~Rt~~Sa~~fl~Gl~p~~ 116 (418)
T 2wnh_A 53 DGELTGHGYAAVVNKGREEGQHYRQ-----LGLL--QAGCPTAESIYVRASPLQRTRATAQALVDGAFPGC 116 (418)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHH-----TTSS--CSSSCCTTTEEEEECSSHHHHHHHHHHHHHHSTTC
T ss_pred cCccChhHHHHHHHHHHHHHHHHHh-----cCCc--ccCCCCCCeEEEEECCCHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999998884 1454 23 243 5899999999999999999999998643
|
| >1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=5.1e-11 Score=132.80 Aligned_cols=196 Identities=15% Similarity=0.200 Sum_probs=121.9
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.+|++|+..-. ++ ..+.+.+.. ++.|+.....+.+||....++|+++|||+|++..+.... +..+
T Consensus 70 ~~d~V~~~~E~--~~~a~~~~~l~~---~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------e~~~ 135 (412)
T 1vkz_A 70 EEDIVIPGSEE--FLVEGVSNWRSN---VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEVAETPE---------ELRE 135 (412)
T ss_dssp SSCEECCSSGG--GTCC-----CTT---BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEESSHH---------HHHH
T ss_pred CCCEEEECCcH--HHHHHHHHHhhh---hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCEEEECCHH---------HHHH
Confidence 57888884332 33 344555443 667999999999999999999999999999998875310 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cc-------cccCcceEEeeccCCC
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SR-------VRKSGSFIYEDFMPTD 249 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~-------vr~~gSyIYEEFI~t~ 249 (1266)
++. .+..|+|+||..|. .|.|+. +.+. .. ++..- .. ....+.+|.||||+
T Consensus 136 ~~~----~~g~PvvvKp~~~~-----------gg~Gv~-~v~~---~~-el~~a~~~~~~~~~~~g~~~~vlvEe~i~-- 193 (412)
T 1vkz_A 136 KIK----KFSPPYVIKADGLA-----------RGKGVL-ILDS---KE-ETIEKGSKLIIGELIKGVKGPVVIDEFLA-- 193 (412)
T ss_dssp HHT----TSCSSEEEEESSCC-----------SSCCEE-EESS---HH-HHHHHHHHHHHTSSSTTCCSCEEEEECCC--
T ss_pred HHH----hcCCCEEEEeCCCC-----------CCCCEE-EECC---HH-HHHHHHHHHHhhccccCCCCeEEEEECCc--
Confidence 111 13489999999986 366764 3331 11 11100 00 11124899999998
Q ss_pred CceEEEEEEC-CceeEEee---ccCCCCCCceeecCCCCceeeEeeCCHHH----HHHHHHHHHHh-----CC-ccceee
Q psy10158 250 GTDVKVYTVG-PDYAHAEA---RKSPALDGKVERDSEGKEIRYPVILSNAE----KLISRKVCLAF-----KQ-TVCGFD 315 (1266)
Q Consensus 250 GtDVKVYtVG-p~~vhAe~---RKSPvvDG~VRRN~hgKEiRypV~LT~eE----K~IA~kaakAF-----Gq-~VCGfD 315 (1266)
|..+.|.+++ ++.+.+.. ..-...++...-|..+-+.-.|..|+++. +++|.++++++ +. .+++||
T Consensus 194 G~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve 273 (412)
T 1vkz_A 194 GNELSAMAVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGSWGPVEIPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLG 273 (412)
T ss_dssp SEEEEEEEEEETTEEEECCCCEECCEEETTTEEEECSCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred CcEEEEEEEECCCEEEEeeeeEeeeeccCCCCCCCCCCceEEECCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 8888888773 23333322 11111233222233333344667788754 66899999999 44 677789
Q ss_pred EEeeCCCeEEEeecC
Q psy10158 316 LLRANGKSFVCDVNG 330 (1266)
Q Consensus 316 LLRs~ggsyVcDVNG 330 (1266)
++...+++||+|||-
T Consensus 274 ~~~~~~g~~viEiN~ 288 (412)
T 1vkz_A 274 LMLHDGDPYILEYNV 288 (412)
T ss_dssp EEEETTEEEEEEEES
T ss_pred EEEECCCcEEEEEec
Confidence 999866699999996
|
| >3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=128.65 Aligned_cols=229 Identities=14% Similarity=0.224 Sum_probs=143.9
Q ss_pred cccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 98 PIVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 98 P~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
..+|++++-..-.+-.+ .+..++++.+ ||+-|+..+-.+.+||..+.++|+++|||+|++..+....... ..+
T Consensus 116 ~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~--~~~--- 190 (386)
T 3e5n_A 116 AQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVCFDRHTAAH--ADV--- 190 (386)
T ss_dssp CCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCCEEEEEHHHHTT--CCH---
T ss_pred CCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEEeCcccch--hhH---
Confidence 35788887642112121 4566776665 6677899999999999999999999999999999986521000 000
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVK 254 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVK 254 (1266)
.+.+ ..+..|+|+||..|. .|.|+. + +.+.......- ...+.+..+|.||||+ |.++.
T Consensus 191 ~~~~----~~lg~PvvVKP~~gg-----------ss~Gv~-~---v~~~~el~~a~~~a~~~~~~vlVEe~I~--G~E~~ 249 (386)
T 3e5n_A 191 DTLI----AQLGLPLFVKPANQG-----------SSVGVS-Q---VRTADAFAAALALALAYDHKVLVEAAVA--GREIE 249 (386)
T ss_dssp HHHH----HHHCSSEEEEESBSC-----------SSTTCE-E---ECSGGGHHHHHHHHTTTCSEEEEEECCC--SEEEE
T ss_pred HHHH----HhcCCCEEEEECCCC-----------cCCCEE-E---ECCHHHHHHHHHHHHhCCCcEEEEcCCC--CeEEE
Confidence 0011 123489999999986 355663 2 32222111100 1123467899999998 79999
Q ss_pred EEEECCceeEEe---eccCCCCCCc--eeecC-CC--CceeeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEEee-C
Q psy10158 255 VYTVGPDYAHAE---ARKSPALDGK--VERDS-EG--KEIRYPVILSNAE----KLISRKVCLAFKQT-VCGFDLLRA-N 320 (1266)
Q Consensus 255 VYtVGp~~vhAe---~RKSPvvDG~--VRRN~-hg--KEiRypV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs-~ 320 (1266)
|-++|.....+. .+... .+. ++..- ++ .....|..|+++. +++|.++++++|.. +++||++.. +
T Consensus 250 v~vl~~~~~~~~~~gei~~~--~~~~d~~~ky~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~d 327 (386)
T 3e5n_A 250 CAVLGNAVPHASVCGEVVVH--DAFYSYATKYISEHGAEIVIPADIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCAD 327 (386)
T ss_dssp EEEECSSSCEEEEEEEECC-------------------CEESSCSSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTT
T ss_pred EEEEeCCCceEEEeEEEEeC--CcccchhcccCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECC
Confidence 999987653332 33321 221 22222 22 3334466777754 57899999999997 999999987 5
Q ss_pred CCeEEEeec---Cc---eec-----ccCchhhHHHHHHHHHHHHH
Q psy10158 321 GKSFVCDVN---GF---SFV-----KNSNKYYDDSAKILGNMILR 354 (1266)
Q Consensus 321 ggsyVcDVN---Gw---SFV-----K~n~kYYDdcA~ILr~~~l~ 354 (1266)
|.+||+||| |+ |.+ .....|-+-|.+||..-+-+
T Consensus 328 g~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~li~~a~~r 372 (386)
T 3e5n_A 328 GRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRLIELALER 372 (386)
T ss_dssp CCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 679999999 43 332 23346667777777765544
|
| >2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A | Back alignment and structure |
|---|
Probab=99.10 E-value=7.2e-11 Score=130.98 Aligned_cols=198 Identities=19% Similarity=0.172 Sum_probs=122.2
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
+|++|+.+ ..++ ..+.+.++..+ |+.-|+.....+.+||....++|+++|||+|++..+.... +..+
T Consensus 63 ~d~v~~~~--E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------~~~~ 131 (424)
T 2yw2_A 63 VDFTIVGP--EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYEVFTDFE---------KAKE 131 (424)
T ss_dssp CSEEEECS--HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEESCHH---------HHHH
T ss_pred CCEEEECC--chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeEEECCHH---------HHHH
Confidence 56666532 1232 34556666665 5555999999999999999999999999999998875310 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc------c-cCcceEEeeccCCC
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV------R-KSGSFIYEDFMPTD 249 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v------r-~~gSyIYEEFI~t~ 249 (1266)
++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+ . .+..+|.||||+
T Consensus 132 ~~~----~~~~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~g~~~~~~lvEe~i~-- 189 (424)
T 2yw2_A 132 YVE----KVGAPIVVKADGLA-----------AGKGAV-VCE---TVE-KAIETLDRFLNKKIFGKSSERVVIEEFLE-- 189 (424)
T ss_dssp HHH----HHCSSEEEEESSCC-----------TTCSEE-EES---SHH-HHHHHHHHHHTSCTTGGGGSSEEEEECCC--
T ss_pred HHH----HcCCcEEEEeCCCC-----------CCCCEE-EEC---CHH-HHHHHHHHHHhhhhccCCCCeEEEEECCC--
Confidence 111 13479999999986 356663 332 111 11100 011 0 146899999998
Q ss_pred CceEEEEEEC-CceeEE--eecc-CCCCCCceeecCCCCceeeEee-CCHHHH-----HHHHHHHHHh---CC---ccce
Q psy10158 250 GTDVKVYTVG-PDYAHA--EARK-SPALDGKVERDSEGKEIRYPVI-LSNAEK-----LISRKVCLAF---KQ---TVCG 313 (1266)
Q Consensus 250 GtDVKVYtVG-p~~vhA--e~RK-SPvvDG~VRRN~hgKEiRypV~-LT~eEK-----~IA~kaakAF---Gq---~VCG 313 (1266)
|.++.|.++. ++.+++ +.|. ..+.++...-|..+-+.-.|.. |+++.. ++|.++++++ |. .+++
T Consensus 190 g~E~sv~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ 269 (424)
T 2yw2_A 190 GEEASYIVMINGDRYVPLPTSQDHKRLLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLY 269 (424)
T ss_dssp SEEEEEEEEEETTEEEECCCBEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEE
T ss_pred CcEEEEEEEEcCCEEEeecceeeccccccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence 7777776663 234443 3332 2223443333333333445555 887643 5677888887 44 4567
Q ss_pred eeEEeeCCCeEEEeecC
Q psy10158 314 FDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 314 fDLLRs~ggsyVcDVNG 330 (1266)
||++...+++||+|||.
T Consensus 270 ve~~~~~~g~~viEiN~ 286 (424)
T 2yw2_A 270 AGLMITKEGPKVLEFNV 286 (424)
T ss_dssp EEEEEETTEEEEEEEES
T ss_pred EEEEEeCCCcEEEEEec
Confidence 99999876799999997
|
| >3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=129.49 Aligned_cols=204 Identities=14% Similarity=0.194 Sum_probs=132.1
Q ss_pred ccceeeccccCCCcHH-HHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPLE-KAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~-KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++++-..-.+-.+ ....++++.+ ||+-++..+-.+.+||....++|+++|||+|++..+.+.... . ..
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~-~------~~ 181 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRST-L------HR 181 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCEEEECTTCCC-C------CH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCEEEEECcccc-h------hH
Confidence 5788888774333332 4556666665 566677899999999999999999999999999999753210 0 00
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEEE
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKV 255 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKV 255 (1266)
+. -..+..|+|+||..|. .|.|+. ++.+....-.. +...+.+..+|.||||+ |.++.|
T Consensus 182 ~~----~~~lg~PvvVKP~~gg-----------ss~GV~----~v~~~~eL~~a~~~a~~~~~~vlVEe~I~--G~E~~v 240 (373)
T 3lwb_A 182 QE----CERLGLPVFVKPARGG-----------SSIGVS----RVSSWDQLPAAVARARRHDPKVIVEAAIS--GRELEC 240 (373)
T ss_dssp HH----HHHHCSCEEEEESBCS-----------TTTTCE----EECSGGGHHHHHHHHHTTCSSEEEEECCE--EEEEEE
T ss_pred HH----HHhcCCCEEEEeCCCC-----------CCCCEE----EeCCHHHHHHHHHHHHhcCCCEEEeCCCC--CeEEEE
Confidence 00 1234589999999986 355653 23332221110 01123478899999998 899999
Q ss_pred EEECCcee-----EEeeccCCCCCC----c--eeecCCCC--ceeeEeeCCH----HHHHHHHHHHHHhCC-ccceeeEE
Q psy10158 256 YTVGPDYA-----HAEARKSPALDG----K--VERDSEGK--EIRYPVILSN----AEKLISRKVCLAFKQ-TVCGFDLL 317 (1266)
Q Consensus 256 YtVGp~~v-----hAe~RKSPvvDG----~--VRRN~hgK--EiRypV~LT~----eEK~IA~kaakAFGq-~VCGfDLL 317 (1266)
-++|..-. ....+...-..+ . +..+.+.+ +...|..|++ +=+++|.++++++|. .+++||++
T Consensus 241 ~vl~~~~~~~~~~~~~ei~~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~ 320 (373)
T 3lwb_A 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDFF 320 (373)
T ss_dssp EEEECTTSCEEECCCEEEECCSTTCSEESSSCHHHHHTCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred EEEECCCCceEEeeeeEEEccCCCCccccccchhhcccCCCceEEeCCCCCHHHHHHHHHHHHHHHHHhCCccEEEEEEE
Confidence 99987532 122222210011 1 22222223 2334667775 447899999999999 59999999
Q ss_pred eeCCCeEEEeecC
Q psy10158 318 RANGKSFVCDVNG 330 (1266)
Q Consensus 318 Rs~ggsyVcDVNG 330 (1266)
...++.||+|||-
T Consensus 321 ~~~dg~~vlEIN~ 333 (373)
T 3lwb_A 321 LTDDGPVINEINT 333 (373)
T ss_dssp EETTEEEEEEEES
T ss_pred EECCCCEEEEecC
Confidence 8854449999994
|
| >2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A | Back alignment and structure |
|---|
Probab=99.09 E-value=4.2e-11 Score=134.76 Aligned_cols=199 Identities=17% Similarity=0.163 Sum_probs=122.2
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccC
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESE 176 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~ 176 (1266)
.+|++|+.+. .++ ..+.+.++..+ |+.-++.....+.+||....++|+++|||+|++..+.... +..
T Consensus 83 ~~d~vi~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------~~~ 151 (451)
T 2yrx_A 83 AIDLTIVGPE--APLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYE---------EAK 151 (451)
T ss_dssp TCSEEEECSH--HHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEESCHH---------HHH
T ss_pred CCCEEEECCc--hHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeEEECCHH---------HHH
Confidence 4788887432 232 35556666666 4445888999999999999999999999999998885310 111
Q ss_pred CeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc------c-cCcceEEeeccCC
Q psy10158 177 DHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV------R-KSGSFIYEDFMPT 248 (1266)
Q Consensus 177 D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v------r-~~gSyIYEEFI~t 248 (1266)
+++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+ . .+..+|.||||+
T Consensus 152 ~~~~----~~~~PvVvKp~~~~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~g~~~~~~lvEe~i~- 210 (451)
T 2yrx_A 152 AYIE----QKGAPIVIKADGLA-----------AGKGVT-VAQ---TVE-EALAAAKAALVDGQFGTAGSQVVIEEYLE- 210 (451)
T ss_dssp HHHH----HHCSSEEEEECC---------------CCEE-EES---SHH-HHHHHHHHHHHHSCCBTTBCCEEEEECCC-
T ss_pred HHHH----hcCCcEEEEeCCCC-----------CCCcEE-EEC---CHH-HHHHHHHHHHhccccCCCCCeEEEEECCc-
Confidence 1111 13479999999986 356663 332 111 11100 011 0 247899999999
Q ss_pred CCceEEEEEE-CCceeEEe--ecc-CCCCCCceeecCCCCceeeEee-CCHHH-----HHHHHHHHHHh---CCc---cc
Q psy10158 249 DGTDVKVYTV-GPDYAHAE--ARK-SPALDGKVERDSEGKEIRYPVI-LSNAE-----KLISRKVCLAF---KQT---VC 312 (1266)
Q Consensus 249 ~GtDVKVYtV-Gp~~vhAe--~RK-SPvvDG~VRRN~hgKEiRypV~-LT~eE-----K~IA~kaakAF---Gq~---VC 312 (1266)
|.++.|.++ .++.+.+. .|. ..+.|+..--|..+.+.-.|.. |+++. +++|.++++++ |.. ++
T Consensus 211 -G~E~sv~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~ 289 (451)
T 2yrx_A 211 -GEEFSFMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVL 289 (451)
T ss_dssp -SEEEEEEEEEETTEEEECCCBEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEE
T ss_pred -CcEEEEEEEEcCCEEEEeeeEEeccccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence 778888776 23444443 221 2223443333433444445665 88764 33567777776 444 66
Q ss_pred eeeEEeeCCCeEEEeecC
Q psy10158 313 GFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 313 GfDLLRs~ggsyVcDVNG 330 (1266)
+||++...+++||+|||.
T Consensus 290 ~ve~~~~~~g~~viEiN~ 307 (451)
T 2yrx_A 290 YAGLMATANGPKVIEFNA 307 (451)
T ss_dssp EEEEEEETTEEEEEEEES
T ss_pred EEEEEEeCCCcEEEEEec
Confidence 789999877799999994
|
| >4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-10 Score=126.32 Aligned_cols=204 Identities=17% Similarity=0.167 Sum_probs=129.0
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES 175 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~ 175 (1266)
.+|++++-.. |+.- -....++++.+ ||+=.+..+-++..||..+.++|+++|||+|+++.+.+.... ..+.
T Consensus 97 ~~D~vf~~l~-G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~~~---~~~~-- 170 (357)
T 4fu0_A 97 KVDLVFPVLH-GKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSVTFKRFNEE---AAMK-- 170 (357)
T ss_dssp ECSEEEECCC-SHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCEEEEEGGGHH---HHHH--
T ss_pred CCCEEEECCc-CccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCEEeecCCChH---HHHH--
Confidence 4677665422 3332 25567777776 566699999999999999999999999999999988652110 0000
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC-CcccccCcceEEeeccCCCCceEE
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVK 254 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVK 254 (1266)
... ..+..|+|+||..|- .|.|+. + +.|....-.. +.....+..+|.|+||. |..+-
T Consensus 171 -~~~----~~lg~PvvVKP~~gg-----------~s~Gv~-~---v~~~~el~~~~~~a~~~~~~vlvE~~i~--G~e~~ 228 (357)
T 4fu0_A 171 -EIE----ANLTYPLFIKPVRAG-----------SSFGIT-K---VIEKQELDAAIELAFEHDTEVIVEETIN--GFEVG 228 (357)
T ss_dssp -HHH----HHCCSSEEEEETTCS-----------SSTTCE-E---ESSHHHHHHHHHHHTTTCSEEEEEECCC--SEEEE
T ss_pred -HHH----HhcCCCEEEEECCCC-----------CCCceE-E---eccHHhHHHHHHHHhccCCeEEEEEecC--CEEEE
Confidence 000 124599999999986 366663 2 3222211110 01234577899999994 88899
Q ss_pred EEEECCceeEE-----eeccCCCCCCceeecCCCCceeeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEEee-CCCe
Q psy10158 255 VYTVGPDYAHA-----EARKSPALDGKVERDSEGKEIRYPVILSNAE----KLISRKVCLAFKQT-VCGFDLLRA-NGKS 323 (1266)
Q Consensus 255 VYtVGp~~vhA-----e~RKSPvvDG~VRRN~hgKEiRypV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs-~ggs 323 (1266)
|.++|.....+ ..+.....|-.-..+...-+...|..|+++. +++|+++++++|.. +|+||++.. +|.+
T Consensus 229 v~vl~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa~l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~~dg~~ 308 (357)
T 4fu0_A 229 CAVLGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPARIDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTPSGEI 308 (357)
T ss_dssp EEEEESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSCSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCE
T ss_pred EEEEecCCceEEEEEEEEcccccccccccccCCCceEecCCCCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEeCCCCE
Confidence 98888764322 1111111110000111122334466788754 46899999999984 999999876 6779
Q ss_pred EEEeecC
Q psy10158 324 FVCDVNG 330 (1266)
Q Consensus 324 yVcDVNG 330 (1266)
||+|||-
T Consensus 309 ~vlEvNt 315 (357)
T 4fu0_A 309 VFNEVNT 315 (357)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9999993
|
| >3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-09 Score=118.71 Aligned_cols=252 Identities=19% Similarity=0.245 Sum_probs=147.5
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccc-cccceEEecCchhHHHHHHHHHHHhhcccCCc-------
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAAFAKGLLALEGEL------- 594 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~-rhDlKIYSSdEgRVq~TAaaFAkglL~lEgeL------- 594 (1266)
.|+||+.|+.|..+||+.||..|-.. .+|| ...| ..++.|+|++..|+++||++|+.||..-.+.-
T Consensus 37 ~g~LT~~G~~q~~~lG~~lr~~Yv~~----~~~l--~~~~~~~~v~~rst~~~Rt~~Sa~~~l~Gl~p~~~~~~~~~~~~ 110 (342)
T 3it3_A 37 LSELTPIGMNQEYNLGLQLRKRYIDK----FGLL--PEHYVDQSIYVLSSHTNRTVVSAQSLLMGLYPAGTGPLIGDGDP 110 (342)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHTTT----SCSS--CSSCCTTSEEEEECSSHHHHHHHHHHHHHHSCTTSSCEETTTEE
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHhhc----cccc--cccccCceEEEEECCChHHHHHHHHHHHHhCCCCCCCccccCCC
Confidence 38999999999999999999988542 2564 3444 57999999999999999999999999865531
Q ss_pred ------CceeeeeecccccCCCCCCCCcchHHHHHHHHHHHHHHhcCCCCChhcccccCCCCcccHHHHHhhcCCHHHHH
Q psy10158 595 ------TPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCC 668 (1266)
Q Consensus 595 ------tPIlVslVk~~~~~~LLDds~~a~~~md~vKk~L~~lL~~~~~~~~e~~~~l~p~~~~s~~~al~~i~nP~~~~ 668 (1266)
.||-|..+.. .|-| -... -.+.++.+++. -.. +++ +. +..
T Consensus 111 ~~~~~~qpipi~t~~~---~D~l-~~~~----Cp~~~~~~~~~---~~~-s~e------------~~----------~~~ 156 (342)
T 3it3_A 111 AIKDRFQPIPIMTLSA---DSRL-IQFP----YEQYLAVLKKY---VYN-SPE------------WQ----------NKT 156 (342)
T ss_dssp SSGGGCCCCCCEECCT---TCCS-SSCC----HHHHHHHHHHH---TTT-SHH------------HH----------HHH
T ss_pred CCcCCCCCeeEEEeCC---Cccc-CCCC----ChhHHHHHHHH---Hhc-CHH------------HH----------HHH
Confidence 1233322211 1111 0000 01111111110 000 000 00 000
Q ss_pred HHHHHHHHHHHHHHHhhccCcccccCcCCCCCCHHHHHHHHHHHHHHhhcccCcccCCCCCcchhhhhhhhhcCccccCc
Q psy10158 669 KRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQF 748 (1266)
Q Consensus 669 ~~v~~l~~~l~~~~~~~~~d~~~~~~~~c~gE~~~L~~eRW~KL~~dF~~~~k~fD~SKIpDiYD~iKYD~lHNr~fL~~ 748 (1266)
.+..++++.|.+.+.. . .. ++..+-.|||++.+.-.||...-.+
T Consensus 157 ~~~~~~~~~l~~~~G~------------~-~~-----------------------~~~~~~~i~D~l~~~~~hg~~lp~w 200 (342)
T 3it3_A 157 KEAAPNFAKWQQILGN------------R-IS-----------------------GLNDVITVGDVLIVAQAHGKPLPKG 200 (342)
T ss_dssp HHHGGGHHHHHHHHCS------------C-CS-----------------------SHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred HHHHHHHHHHHHHhCC------------C-CC-----------------------CHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 1111222222221110 0 00 0112335889999988999763332
Q ss_pred ---ccHHHHHHHHHhhhcccccccccCCccchhhhHHhhhHHHHHHHHHHHHhhhhhhhhhhccCCCCCCCCCCCCCccc
Q psy10158 749 ---DQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHV 825 (1266)
Q Consensus 749 ---~~l~ELY~laK~LaD~V~PQEYGIt~~EKL~IG~~is~pLLkKI~~DL~~~~ee~~es~~RL~p~ys~gV~SP~RhV 825 (1266)
+.+.+|..++..-+++. ..--++..+...|||++|+..|+...+ | .+ ..
T Consensus 201 ~~~~~~~~l~~l~~~~~~~~---------~~~~~~~~~~gg~ll~~i~~~l~~~~~---------------~-~~---~~ 252 (342)
T 3it3_A 201 LSQEDADQIIALTDWGLAQQ---------FKSQKVSYIMGGKLTNRMIEDLNNAVN---------------G-KS---KY 252 (342)
T ss_dssp CCHHHHHHHHHHHHHHHHHH---------HTSHHHHHHHHHHHHHHHHHHHHHHHS---------------S-SC---CC
T ss_pred cCHHHHHHHHHHHHHHHHHh---------hCCHHHHHHHHHHHHHHHHHHHHHHhc---------------C-CC---Cc
Confidence 22344444444333331 122457888899999999999964321 1 01 35
Q ss_pred eeEEEeccchhHHHHHHHHHhCCCCccccCChHHHHHHHhhhcCCCCccccccceeeeeeCCCCCCCCCCceEEEEEEcC
Q psy10158 826 RTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSP 905 (1266)
Q Consensus 826 RTRlYFTSESHIHTLLNvLr~ggl~~~~~~~d~~~~ram~~l~~ipELdYLSqIvf~LYE~~~~d~~~~~rf~Iei~~Sp 905 (1266)
|-.+||+..+-|-+||..| |+.. ..+|. |-+.|+||||++. ..+.||+.+.-
T Consensus 253 k~~l~~~HD~ti~~ll~aL---g~~~----------------~~~pp--~as~i~~El~~~~-------~~~~Vr~~~~~ 304 (342)
T 3it3_A 253 KMTYYSGHALTLLEVMGTL---GVPL----------------DTAPG--YASNLEMELYKDG-------DIYTVKLRYNG 304 (342)
T ss_dssp SEEEEEECHHHHHHHHHHT---TCCC----------------SSCCC--TTCEEEEEEEEET-------TEEEEEEEETT
T ss_pred eEEEEEecHHHHHHHHHHh---CCCc----------------CCCCC--CcceEEEEEEEcC-------CceEEEEEEeC
Confidence 7899999999998888887 3332 13544 7899999999984 56889999876
Q ss_pred C
Q psy10158 906 G 906 (1266)
Q Consensus 906 G 906 (1266)
+
T Consensus 305 ~ 305 (342)
T 3it3_A 305 K 305 (342)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=3.6e-11 Score=133.31 Aligned_cols=186 Identities=17% Similarity=0.154 Sum_probs=115.3
Q ss_pred HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEE
Q psy10158 114 EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVE 192 (1266)
Q Consensus 114 ~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVe 192 (1266)
..+.+.++..+ |+.-|+.....+.+||....++|+++|||+|++..+.... +..+++. .+..|+|+
T Consensus 76 ~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------~~~~~~~----~~~~P~vv 142 (422)
T 2xcl_A 76 EGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYETFTSFD---------EAKAYVQ----EKGAPIVI 142 (422)
T ss_dssp TTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEESCHH---------HHHHHHH----HHCSSEEE
T ss_pred HHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEECCHH---------HHHHHHH----hcCCCEEE
Confidence 34556666565 4555999999999999999999999999999998875310 1111111 13479999
Q ss_pred ecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc------c-cCcceEEeeccCCCCceEEEEEEC-Ccee
Q psy10158 193 KPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV------R-KSGSFIYEDFMPTDGTDVKVYTVG-PDYA 263 (1266)
Q Consensus 193 Kpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v------r-~~gSyIYEEFI~t~GtDVKVYtVG-p~~v 263 (1266)
||..|. .|.|+. +.+ +.. ++..- ..+ . .+..+|.||||+ |.++.|.++. ++.+
T Consensus 143 Kp~~~~-----------~g~Gv~-~v~---~~~-el~~~~~~~~~~~~~g~~~~~~lvEe~i~--g~E~sv~~~~dG~~~ 204 (422)
T 2xcl_A 143 KADGLA-----------AGKGVT-VAM---TEE-EAIACLHDFLEDEKFGDASASVVIEEYLS--GEEFSLMAFVKGEKV 204 (422)
T ss_dssp EESSCG-----------GGTCEE-EES---SHH-HHHHHHHHHHTSCTTGGGGSSEEEEECCC--SEEEEEEEEEETTEE
T ss_pred EeCCCC-----------CCCcEE-EEC---CHH-HHHHHHHHHHhhhhccCCCCeEEEEECCc--CcEEEEEEEEcCCEE
Confidence 999986 355653 322 111 11000 011 0 246899999998 8888887773 2334
Q ss_pred EE--eecc-CCCCCCceeecCCCCceeeEee-CCHHHH-----HHHHHHHHHh---CC---ccceeeEEeeCCCeEEEee
Q psy10158 264 HA--EARK-SPALDGKVERDSEGKEIRYPVI-LSNAEK-----LISRKVCLAF---KQ---TVCGFDLLRANGKSFVCDV 328 (1266)
Q Consensus 264 hA--e~RK-SPvvDG~VRRN~hgKEiRypV~-LT~eEK-----~IA~kaakAF---Gq---~VCGfDLLRs~ggsyVcDV 328 (1266)
++ +.|. ..+.++...-|..|-+.-.|.. |+++.. ++|.++++++ |+ .+++||++...+++||+||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~~g~~viEi 284 (422)
T 2xcl_A 205 YPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENGSKVIEF 284 (422)
T ss_dssp EECCCBEEEEEEEGGGEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTEEEEEEE
T ss_pred EecceeeeeehhcCCCCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeCCCcEEEEE
Confidence 43 2221 1122332222322223334555 787543 3677888776 44 4566899998777999999
Q ss_pred cC
Q psy10158 329 NG 330 (1266)
Q Consensus 329 NG 330 (1266)
|.
T Consensus 285 N~ 286 (422)
T 2xcl_A 285 NA 286 (422)
T ss_dssp ES
T ss_pred ec
Confidence 96
|
| >1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A | Back alignment and structure |
|---|
Probab=99.08 E-value=4.2e-09 Score=114.05 Aligned_cols=257 Identities=21% Similarity=0.334 Sum_probs=143.5
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccc-cccceEEecCchhHHHHHHHHHHHhhcccCC--------c
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAAFAKGLLALEGE--------L 594 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~-rhDlKIYSSdEgRVq~TAaaFAkglL~lEge--------L 594 (1266)
|+||+.|+.|..+||+.||..|++ || ...| ..++.|+||+-.||.+||++|+.||....+. .
T Consensus 36 g~LT~~G~~q~~~lG~~lr~rY~~-------ll--~~~~~~~~v~vrst~~~Rt~~SA~~fl~Gl~p~~~~~~~~~~~~~ 106 (354)
T 1nd6_A 36 GQLTQLGMEQHYELGEYIRKRYRK-------FL--NESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLW 106 (354)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHTTT-------TT--CSSCCGGGEEEEEESCHHHHHHHHHHHHHHSCCCGGGCSCTTCCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH-------Hh--ccccCcCeEEEEECCchHHHHHHHHHHHhcCCCCCcccCCCCCCC
Confidence 899999999999999999998973 43 3334 3579999999999999999999999964431 2
Q ss_pred CceeeeeecccccCCCCCCC-CcchHHHHHHHHHHHHHHhcCCCCChhcccccCCCCcccHHHHHhhcCCHHHHHHHHHH
Q psy10158 595 TPILVQMVKSANTNGLLDND-SDASKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHE 673 (1266)
Q Consensus 595 tPIlVslVk~~~~~~LLDds-~~a~~~md~vKk~L~~lL~~~~~~~~e~~~~l~p~~~~s~~~al~~i~nP~~~~~~v~~ 673 (1266)
.||-|..+.. ..+.+|... .......+.+++... .++ +.+.+. + .-.
T Consensus 107 qpipi~~~~~-~~d~~l~~~~~~Cp~~~~~~~~~~~---------~~~------------~~~~~~----~------~~~ 154 (354)
T 1nd6_A 107 QPIPVHTVPL-SEDQLLYLPFRNCPRFQELESETLK---------SEE------------FQKRLH----P------YKD 154 (354)
T ss_dssp CCCCCEEECG-GGCSSSSCSCCSCHHHHHHHHHHHH---------CHH------------HHHHHG----G------GHH
T ss_pred cccceEecCC-CcChhccCCCCCChhHHHHHHHHhc---------CHH------------HHHHHH----H------HHH
Confidence 3444444432 123345311 111111111111100 011 111000 0 011
Q ss_pred HHHHHHHHHHhhccCcccccCcCCCCCCHHHHHHHHHHHHHHhhcccCcccCCCCCcchhhhhhhhhcCccccCcccHHH
Q psy10158 674 LIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEE 753 (1266)
Q Consensus 674 l~~~l~~~~~~~~~d~~~~~~~~c~gE~~~L~~eRW~KL~~dF~~~~k~fD~SKIpDiYD~iKYD~lHNr~fL~~~~l~E 753 (1266)
+++.|.+... . ...++ ..-| ..+||++..--.||..+-.|- -.+
T Consensus 155 ~~~~l~~~~g-----~--------~~~~~---~~~~-------------------~~~~d~l~~~~~~~~~l~~~~-~~~ 198 (354)
T 1nd6_A 155 FIATLGKLSG-----L--------HGQDL---FGIW-------------------SKVYDPLYCESVHNFTLPSWA-TED 198 (354)
T ss_dssp HHHHHHHHHS-----C--------CSSCH---HHHH-------------------HHTHHHHHHHHHTTCCCCTTC-CHH
T ss_pred HHHHHHHHhC-----C--------CCCCH---HHHH-------------------HHHHHHHHHHHHhCCCCCccc-cHH
Confidence 2222222110 0 00111 1112 234555555555664322221 133
Q ss_pred HHHHHHhhhcccccccccCCccchhhhHHhhhHHHHHHHHHHHHhhhhhhhhhhccCCCCCCCCCCCCCccceeEEEecc
Q psy10158 754 LYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTS 833 (1266)
Q Consensus 754 LY~laK~LaD~V~PQEYGIt~~EKL~IG~~is~pLLkKI~~DL~~~~ee~~es~~RL~p~ys~gV~SP~RhVRTRlYFTS 833 (1266)
.+...+.++|+.-=..||.... -+++.....|||++|+..|+..... . ...+-.+||+-
T Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~g~~ll~~i~~~l~~~~~~---~----------------~~~k~~~~~~H 257 (354)
T 1nd6_A 199 TMTKLRELSELSLLSLYGIHKQ--KEKSRLQGGVLVNEILNHMKRATQI---P----------------SYKKLIMYSAH 257 (354)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSH--HHHHHHTTHHHHHHHHHHHHHHHHS---T----------------TCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcccCc--HHHHHHHhhHHHHHHHHHHHHHhcC---C----------------CCCcEEEEEec
Confidence 4444445555433334565332 2466778889999999999743221 0 02368999998
Q ss_pred chhHHHHHHHHHhCCCCccccCChHHHHHHHhhhcCCCCccccccceeeeeeCCCCCCCCCCceEEEEEEcCC
Q psy10158 834 ESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPG 906 (1266)
Q Consensus 834 ESHIHTLLNvLr~ggl~~~~~~~d~~~~ram~~l~~ipELdYLSqIvf~LYE~~~~d~~~~~rf~Iei~~SpG 906 (1266)
.+-|-.||..| |+.. ..+| .|-+.|+||||.+ ...+.||+.+-.+
T Consensus 258 D~ti~~ll~aL---g~~~----------------~~~p--p~as~i~fEl~~~-------~~~~~Vr~~~n~~ 302 (354)
T 1nd6_A 258 DTTVSGLQMAL---DVYN----------------GLLP--PYASCHLTELYFE-------KGEYFVEMYYRNE 302 (354)
T ss_dssp HHHHHHHHHHT---TCCC----------------SSCC--CTTCEEEEEEEEE-------TTEEEEEEEEECC
T ss_pred HHHHHHHHHHc---CCCC----------------CCCC--chhhheeeEEEec-------CCceEEEEEEeCC
Confidence 88888888876 3332 1344 5889999999974 2467899998655
|
| >2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.5e-11 Score=132.10 Aligned_cols=198 Identities=13% Similarity=0.177 Sum_probs=121.2
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
+|++|+.+. .++ ..+.+.++..+ |+.-|+.....+.+||....++|+++|||+|++..+.... +..+
T Consensus 89 ~d~V~~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~---------~~~~ 157 (452)
T 2qk4_A 89 IEFVVVGPE--APLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKAFTKPE---------EACS 157 (452)
T ss_dssp CCEEEECSS--HHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEEEESSHH---------HHHH
T ss_pred CCEEEECCc--HHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHH---------HHHH
Confidence 688887432 332 34556666556 4545999999999999999999999999999998875310 1111
Q ss_pred eEEEcCeEecCC-EEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-------cCcceEEeeccCC
Q psy10158 178 HVEVNGIVFNKP-FVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-------KSGSFIYEDFMPT 248 (1266)
Q Consensus 178 ~I~v~G~~~~kP-fVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-------~~gSyIYEEFI~t 248 (1266)
++. .+..| +|+||..|. .|.|+. +.+ +.. ++..- ..+. .+..+|.||||+
T Consensus 158 ~~~----~~g~P~vvvKp~~~~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~g~~~~~~lvEe~i~- 216 (452)
T 2qk4_A 158 FIL----SADFPALVVKASGLA-----------AGKGVI-VAK---SKE-EACKAVQEIMQEKAFGAAGETIVIEELLD- 216 (452)
T ss_dssp HHH----HCSSCEEEEEESBC--------------CCEE-ECS---SHH-HHHHHHHHHTTC-------CCEEEEECCC-
T ss_pred HHH----hCCCCeEEEEeCCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHhhhhccCCCCeEEEEECCC-
Confidence 111 13489 999999986 355663 222 211 11100 0110 146899999999
Q ss_pred CCceEEEEEEC-Cc-eeE-Eeecc-CCCCCCceeecCCCCceeeEee-CCHHHH-----HHHHHHHHHhC------Cccc
Q psy10158 249 DGTDVKVYTVG-PD-YAH-AEARK-SPALDGKVERDSEGKEIRYPVI-LSNAEK-----LISRKVCLAFK------QTVC 312 (1266)
Q Consensus 249 ~GtDVKVYtVG-p~-~vh-Ae~RK-SPvvDG~VRRN~hgKEiRypV~-LT~eEK-----~IA~kaakAFG------q~VC 312 (1266)
|.++.|.+++ ++ +++ .+.|. -.+.++...-|..+-+.-.|.. |+++.. ++|.+++++++ ..++
T Consensus 217 -G~E~sv~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~ 295 (452)
T 2qk4_A 217 -GEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGIL 295 (452)
T ss_dssp -SEEEEEEEEECSSCEEECCCBEEEEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEE
T ss_pred -CCeEEEEEEECCCEEEEcceeeecccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence 8899998884 33 332 22221 1122333222322222334555 787543 57788888873 3578
Q ss_pred eeeEEeeCCCeEEEeecC
Q psy10158 313 GFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 313 GfDLLRs~ggsyVcDVNG 330 (1266)
+||++...+++||+|||.
T Consensus 296 ~ve~~~~~~g~~viEiN~ 313 (452)
T 2qk4_A 296 YAGIMLTKNGPKVLEFNC 313 (452)
T ss_dssp EEEEEEETTEEEEEEEES
T ss_pred EEEEEEeCCCcEEEEEec
Confidence 999999876699999997
|
| >3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.1e-10 Score=122.87 Aligned_cols=193 Identities=17% Similarity=0.226 Sum_probs=118.4
Q ss_pred cceeeccccCCCcHH-HHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 100 VDCLISFHSKGFPLE-KAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~-KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.|++|++.-.+.++. ++-+.+.+. =|+...-.+.+||....++|+++|||+|++..++.... + .
T Consensus 76 id~V~~~~e~~~~~~a~l~e~lglp----g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~------~---~-- 140 (425)
T 3vot_A 76 FDGVMTLFEPALPFTAKAAEALNLP----GLPFTTMENCRNKNKTRSILQQNGLNTPVFHEFHTLAD------L---E-- 140 (425)
T ss_dssp CSEEECCCGGGHHHHHHHHHHTTCS----SCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEESSGGG------G---T--
T ss_pred CCEEEECCchhHHHHHHHHHHcCCC----CCCHHHHHHhhCHHHHHHHHHHCCCCCCceeccCcHHH------H---H--
Confidence 466777654444442 222333332 25677888999999999999999999999998864211 1 1
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCcccc---cc------C---CcccccCcceEEeecc
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV---YS------P---ESRVRKSGSFIYEDFM 246 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~---y~------p---~s~vr~~gSyIYEEFI 246 (1266)
...+..|+|+||..|. .|.|+. +.+ +.... +. . ......+..+|.||||
T Consensus 141 ----~~~~g~P~vvKp~~g~-----------gs~Gv~-~v~---~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i 201 (425)
T 3vot_A 141 ----NRKLSYPLVVKPVNGF-----------SSQGVV-RVD---DRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFI 201 (425)
T ss_dssp ----TCCCCSSEEEEESCC----------------CE-EEC---SHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECC
T ss_pred ----HhhcCCcEEEEECCCC-----------CCCCce-Eec---hHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEe
Confidence 1235689999999986 366664 222 21110 00 0 0011246789999999
Q ss_pred CCCCceEEEEEECCceeE-EeeccCCCCCCceeecCCCCceeeEeeCCHHHH----HHHHHHHHHhCC--ccceeeEEee
Q psy10158 247 PTDGTDVKVYTVGPDYAH-AEARKSPALDGKVERDSEGKEIRYPVILSNAEK----LISRKVCLAFKQ--TVCGFDLLRA 319 (1266)
Q Consensus 247 ~t~GtDVKVYtVGp~~vh-Ae~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK----~IA~kaakAFGq--~VCGfDLLRs 319 (1266)
+-.--.|-+++.++++.. +..++-.. .|. +....+.-.|..|+++.. ++|.++++++|. .+++||++..
T Consensus 202 ~G~e~sv~~~~~~g~~~~~~~~~~~~~-~~~---~~~~~~~~~Pa~l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~ 277 (425)
T 3vot_A 202 DGPEFAIETLSIQGNVHVLSIGYKGNS-KGP---FFEEGVYIAPAQLKEETRLAIVKEVTGAVSALGIHQGPAHTELRLD 277 (425)
T ss_dssp CSCEEEEEEEEETTEEEEEEEEEEECC-CCS---BCCCCEEEESCCCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEEC
T ss_pred cCcEEEEEEEEeCCcEEEEeEEEEecc-CCC---ccccceEeecccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEE
Confidence 743345666666666433 33333321 221 122344456778888653 578899999997 3899999987
Q ss_pred -CCCeEEEeecC
Q psy10158 320 -NGKSFVCDVNG 330 (1266)
Q Consensus 320 -~ggsyVcDVNG 330 (1266)
+|.+||+|||.
T Consensus 278 ~dG~~~~iEiN~ 289 (425)
T 3vot_A 278 KDGTPYVIEVGA 289 (425)
T ss_dssp TTCCEEEEEEES
T ss_pred eCCcEEEEEEec
Confidence 56699999995
|
| >3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.4e-10 Score=129.51 Aligned_cols=199 Identities=13% Similarity=0.176 Sum_probs=129.1
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcCCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRKPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrkp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
+|++|+. ...|+ ..+.++++..+..++ |+.....+.+||....++|+++|||+|++..+.... +..+
T Consensus 84 id~vv~g--~E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~---------ea~~ 152 (442)
T 3lp8_A 84 IELVVIG--PETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGYFVDTN---------SAYK 152 (442)
T ss_dssp CCEEEEC--SHHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEEEESSHH---------HHHH
T ss_pred CCEEEEC--CcHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEEEECCHH---------HHHH
Confidence 5666652 22343 245566776766555 999999999999999999999999999998886311 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcc------c-ccCcceEEeeccCCCC
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESR------V-RKSGSFIYEDFMPTDG 250 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~------v-r~~gSyIYEEFI~t~G 250 (1266)
++. .+..|+|+||..|. .|.|+. +.+ +....-..-.. . ..+..+|.||||+ |
T Consensus 153 ~~~----~~g~PvVvKp~~~~-----------gg~GV~-iv~---~~eel~~a~~~~~~~~~~g~~~~~vlvEe~i~--G 211 (442)
T 3lp8_A 153 FID----KHKLPLVVKADGLA-----------QGKGTV-ICH---THEEAYNAVDAMLVHHKFGEAGCAIIIEEFLE--G 211 (442)
T ss_dssp HHH----HSCSSEEEEESSCC-----------TTTSEE-EES---SHHHHHHHHHHHHTSCTTGGGGSSEEEEECCC--S
T ss_pred HHH----HcCCcEEEeECCCC-----------CCCeEE-EeC---CHHHHHHHHHHHHhhcccCCCCCeEEEEEeec--C
Confidence 221 13489999999886 466664 333 21111000000 1 1236899999999 7
Q ss_pred ceEEEEEE--CCceeE-Eeec-cCCCCCCceeecCCCCceeeEee-CCHHHHHH--------HHHHHHHhCCccce---e
Q psy10158 251 TDVKVYTV--GPDYAH-AEAR-KSPALDGKVERDSEGKEIRYPVI-LSNAEKLI--------SRKVCLAFKQTVCG---F 314 (1266)
Q Consensus 251 tDVKVYtV--Gp~~vh-Ae~R-KSPvvDG~VRRN~hgKEiRypV~-LT~eEK~I--------A~kaakAFGq~VCG---f 314 (1266)
.++-|.++ |..++. ...+ .-++.||+.--|+-|-+.-.|.. |+++..+- |.++.+++|....| +
T Consensus 212 ~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~v 291 (442)
T 3lp8_A 212 KEISFFTLVDGSNPVILGVAQDYKTIGDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFA 291 (442)
T ss_dssp EEEEEEEEEESSCEEEEEEEEECCEEEGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEE
T ss_pred cEEEEEEEECCCeEEEeEEeEeeeecccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 77777666 444432 2222 22334666566666666667775 88865443 55666888985555 9
Q ss_pred eEEeeCCCeEEEeecC
Q psy10158 315 DLLRANGKSFVCDVNG 330 (1266)
Q Consensus 315 DLLRs~ggsyVcDVNG 330 (1266)
|++...+++||+|||-
T Consensus 292 e~~~~~~g~~viEiN~ 307 (442)
T 3lp8_A 292 GIIIKKNEPKLLEYNV 307 (442)
T ss_dssp EEEEETTEEEEEEEES
T ss_pred EEEEeCCCeEEEEEec
Confidence 9999988899999996
|
| >2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=2.4e-10 Score=127.98 Aligned_cols=196 Identities=13% Similarity=0.157 Sum_probs=126.4
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e 174 (1266)
.+|++|+.|+. ++. ..+.+.++..+ |++-|+.....+.+||....++|+++|||+|++. .+... . ++.
T Consensus 74 ~~d~v~~~~g~-~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~----~--~~~- 145 (449)
T 2w70_A 74 GAVAIHPGYGF-LSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDD----M--DKN- 145 (449)
T ss_dssp TCCEEECCSST-TTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSC----H--HHH-
T ss_pred CCCEEEECCCC-cccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCH----H--HHH-
Confidence 47889887631 132 23456666655 4566899999999999999999999999999986 44321 0 010
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-------cCcceEEeecc
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-------KSGSFIYEDFM 246 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-------~~gSyIYEEFI 246 (1266)
.+++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+. .++.+|.||||
T Consensus 146 -~~~~~----~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~i 204 (449)
T 2w70_A 146 -RAIAK----RIGYPVIIKASGGG-----------GGRGMR-VVR---GDA-ELAQSISMTRAEAKAAFSNDMVYMEKYL 204 (449)
T ss_dssp -HHHHH----HHCSSEEEEETTCC-----------TTTTCE-EEC---SHH-HHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred -HHHHH----HhCCcEEEEECCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHHHHHhhcCCCcEEEEecc
Confidence 11111 13489999999986 366663 332 221 11100 0111 15789999999
Q ss_pred CCCCceEEEEEEC---CceeEEeeccCCCCCCceeecCCCC-ceeeEee-CCHHH----HHHHHHHHHHhCCc-cceeeE
Q psy10158 247 PTDGTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGK-EIRYPVI-LSNAE----KLISRKVCLAFKQT-VCGFDL 316 (1266)
Q Consensus 247 ~t~GtDVKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgK-EiRypV~-LT~eE----K~IA~kaakAFGq~-VCGfDL 316 (1266)
+- +.++.|.+++ +++++...|..+ +.++ |.+ ....|.. |+++. +++|.++++++|.. +++||+
T Consensus 205 ~g-~~e~~v~~~~~~~G~~~~~~~~~~~-----~~~~-~~~~~~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~ 277 (449)
T 2w70_A 205 EN-PRHVEIQVLADGQGNAIYLAERDCS-----MQRR-HQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEF 277 (449)
T ss_dssp SS-CEEEEEEEEECTTSCEEEEEEEEEE-----EEET-TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CC-CeEEEEEEEEcCCCCEEEEeceecc-----cccC-CcceeeeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEE
Confidence 73 4788888876 456776665432 1121 111 1123443 77643 66899999999985 789999
Q ss_pred EeeCCCeEEEeecC
Q psy10158 317 LRANGKSFVCDVNG 330 (1266)
Q Consensus 317 LRs~ggsyVcDVNG 330 (1266)
+...|++||+|||.
T Consensus 278 ~~~~~~~~viEiN~ 291 (449)
T 2w70_A 278 LFENGEFYFIEMNT 291 (449)
T ss_dssp EEETTEEEEEEEEC
T ss_pred EEECCCEEEEEEEC
Confidence 99889999999997
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-09 Score=120.03 Aligned_cols=194 Identities=12% Similarity=0.236 Sum_probs=124.0
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.||++...| ...+. .++++++.... +.|+.....+.+||.+..++|+++|||+|++..+.... +..+.
T Consensus 75 ~~dvI~~~~-e~~~~-~~~~~l~~~g~-~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~---------~~~~~ 142 (389)
T 3q2o_A 75 ISDVVTYEF-ENIDY-RCLQWLEKHAY-LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQE---------QLTEA 142 (389)
T ss_dssp TCSEEEESC-CCCCH-HHHHHHHHHSC-CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEEEESSHH---------HHHHH
T ss_pred hCCEeeecc-ccccH-HHHHHHHhhCc-cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHH---------HHHHH
Confidence 488875444 33444 45556655554 77999999999999999999999999999999886411 01111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTV 258 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtV 258 (1266)
+. .+..|+|+||..|. +.|.|+. +.+. ....-..-..+ .++.+|.||||+ ++.++.|.++
T Consensus 143 ~~----~~g~P~vvKp~~~~----------~~g~Gv~-~v~~---~~el~~~~~~~-~~~~~lvEe~i~-g~~E~~v~~~ 202 (389)
T 3q2o_A 143 IA----ELSYPSVLKTTTGG----------YDGKGQV-VLRS---EADVDEARKLA-NAAECILEKWVP-FEKEVSVIVI 202 (389)
T ss_dssp HH----HHCSSEEEEESSCC----------SSSCCEE-EESS---GGGHHHHHHHH-HHSCEEEEECCC-CSEEEEEEEE
T ss_pred HH----hcCCCEEEEeCCCC----------CCCCCeE-EECC---HHHHHHHHHhc-CCCCEEEEeccc-CceEEEEEEE
Confidence 11 23489999999984 0145553 2221 11100000011 257899999998 3489999998
Q ss_pred CC---ceeE-EeeccCCCCCCceeecCCCCceeeEeeCCHH----HHHHHHHHHHHhCCc-cceeeEEee-CCCeEEEee
Q psy10158 259 GP---DYAH-AEARKSPALDGKVERDSEGKEIRYPVILSNA----EKLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDV 328 (1266)
Q Consensus 259 Gp---~~vh-Ae~RKSPvvDG~VRRN~hgKEiRypV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDV 328 (1266)
+. +++. ...+.-+ .+|.+ .+.-.|..|+++ =+++|.++++++|.. +++||++.. +|.+||+||
T Consensus 203 ~~~~G~~~~~~~~e~~~-~~g~~------~~~~~p~~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~dg~~~viEi 275 (389)
T 3q2o_A 203 RSVSGETKVFPVAENIH-VNNIL------HESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINEL 275 (389)
T ss_dssp ECTTCCEEECCCEEEEE-ETTEE------EEEEESCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEE
T ss_pred EcCCCCEEEecCeeeEE-cCCce------EEEECCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCCEEEEEe
Confidence 64 2221 1111100 12322 233345567764 357889999999997 999999987 567999999
Q ss_pred cCc
Q psy10158 329 NGF 331 (1266)
Q Consensus 329 NGw 331 (1266)
|--
T Consensus 276 NpR 278 (389)
T 3q2o_A 276 APR 278 (389)
T ss_dssp ESS
T ss_pred eCC
Confidence 964
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=5.2e-10 Score=125.15 Aligned_cols=197 Identities=18% Similarity=0.194 Sum_probs=124.2
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
||+++.-+ ..+...++++++. +.++.++.....+.+||....++|++.|||+|++..+..... .+..+.+
T Consensus 87 ~d~i~~e~--e~~~~~~l~~l~~-g~~v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~-------~~~~~~~ 156 (403)
T 3k5i_A 87 CDVVTAEI--EHVDTYALEEVAS-EVKIEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTP-------AELAKVG 156 (403)
T ss_dssp CSEEEESS--SCSCHHHHHHHTT-TSEESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCH-------HHHHHHH
T ss_pred CCEEEECC--CCCCHHHHHHHHc-CCccCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCH-------HHHHHHH
Confidence 56554322 2234556677777 666889999999999999999999999999999999863211 0111111
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEEEC
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVG 259 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVG 259 (1266)
. .+..|+|+||..|. +.|.|+. +.+....-...+. .+ .+..+|.||||+ .|.++.|.+++
T Consensus 157 ~----~~g~P~VvKp~~gg----------~~g~Gv~-~v~~~~el~~a~~---~~-~~~~~lvEe~i~-~~~E~sv~v~~ 216 (403)
T 3k5i_A 157 E----QLGYPLMLKSKTMA----------YDGRGNF-RVNSQDDIPEALE---AL-KDRPLYAEKWAY-FKMELAVIVVK 216 (403)
T ss_dssp H----HHCSSEEEEESSSC----------CTTTTEE-EECSTTSHHHHHH---HT-TTSCEEEEECCC-EEEEEEEEEEE
T ss_pred H----HhCCCEEEEeCCCC----------cCCCCEE-EECCHHHHHHHHH---hc-CCCcEEEecCCC-CCeEEEEEEEE
Confidence 1 23489999998774 0255663 3332110000010 11 267899999996 36889999887
Q ss_pred CceeEEeeccCCCCCCceeecCCCCceeeEee-CCHHH----HHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeecC
Q psy10158 260 PDYAHAEARKSPALDGKVERDSEGKEIRYPVI-LSNAE----KLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 260 p~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~-LT~eE----K~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVNG 330 (1266)
...- .+--|+. ..+.++-.-.+.-.|.. |+++. +++|.++++++|.. +++||++.. +|.+||+|||-
T Consensus 217 ~~~g---~~~~p~~-~~~~~~g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~dg~~~v~EiNp 290 (403)
T 3k5i_A 217 TKDE---VLSYPTV-ETVQEDSICKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIAS 290 (403)
T ss_dssp CSSC---EEECCCE-EEEEETTEEEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEETTSCEEEEEEES
T ss_pred cCCC---EEEeCCe-eeEEeCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCcEEEEEeec
Confidence 5321 1122321 11222111112234555 77765 37889999999985 889999987 56799999996
|
| >2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=8.1e-10 Score=117.19 Aligned_cols=185 Identities=16% Similarity=0.183 Sum_probs=107.9
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
+|++++.... .++ .+++.++..+..++|+.....+.+||....++|+++|||+|++ +.. + ++
T Consensus 63 ~d~i~~~~e~-~~~-~~~~~le~~g~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~----~--------~~-- 124 (334)
T 2r85_A 63 NAVVVPTGSF-VAH-LGIELVENMKVPYFGNKRVLRWESDRNLERKWLKKAGIRVPEV--YED----P--------DD-- 124 (334)
T ss_dssp TEEECCCTTH-HHH-HCHHHHHTCCSCBBSCTTHHHHHHSHHHHHHHHHHTTCCCCCB--CSC----G--------GG--
T ss_pred CCEEEECcch-hhh-hHHHHHHHcCCCccCCHHHHHHHHhHHHHHHHHHHcCCCCCCc--cCC----h--------HH--
Confidence 3776644211 122 2334445566557798888899999999999999999999999 321 0 11
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc------ccCcceEEeeccCCCCce-
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV------RKSGSFIYEDFMPTDGTD- 252 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v------r~~gSyIYEEFI~t~GtD- 252 (1266)
+..|+|+||..|. .|.|+. +.+ +.......-..+ .....+|.||||+-.--+
T Consensus 125 ------l~~P~vvKP~~g~-----------~s~Gv~-~v~---~~~el~~~~~~~~~~~~~~~~~~~lvee~i~G~e~~~ 183 (334)
T 2r85_A 125 ------IEKPVIVKPHGAK-----------GGKGYF-LAK---DPEDFWRKAEKFLGIKRKEDLKNIQIQEYVLGVPVYP 183 (334)
T ss_dssp ------CCSCEEEEECC---------------TTCE-EES---SHHHHHHHHHHHHCCCSGGGCCSEEEEECCCCEEEEE
T ss_pred ------cCCCEEEEeCCCC-----------CCCCEE-EEC---CHHHHHHHHHHHHhhcccCCCCcEEEEeccCCceeEE
Confidence 2379999999986 355653 222 221110000011 123789999999831112
Q ss_pred ----------EEEEEECCceeEEeeccCCCCCCcee--------ecCCCCceee---EeeCC----HHHHHHHHHHHHHh
Q psy10158 253 ----------VKVYTVGPDYAHAEARKSPALDGKVE--------RDSEGKEIRY---PVILS----NAEKLISRKVCLAF 307 (1266)
Q Consensus 253 ----------VKVYtVGp~~vhAe~RKSPvvDG~VR--------RN~hgKEiRy---pV~LT----~eEK~IA~kaakAF 307 (1266)
|.+++++.++... .+|.++ .|......-. |..|+ ++-+++|.++++++
T Consensus 184 ~~~~~~~~~~v~~~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~l~~~~~~~i~~~a~~~~~~l 256 (334)
T 2r85_A 184 HYFYSKVREELELMSIDRRYESN-------VDAIGRIPAKDQLEFDMDITYTVIGNIPIVLRESLLMDVIEAGERVVKAA 256 (334)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEE-------GGGGGGSCHHHHTTSCCCCCEEEEEEEECCCCGGGHHHHHHHHHHHHHHH
T ss_pred EEeecCcCceeeeeeeccEEEec-------cCcccccccccccccccCCceeeeCCCCcccCHHHHHHHHHHHHHHHHHH
Confidence 3333333333211 011111 0000001111 66676 56678999999999
Q ss_pred C------CccceeeEEee-CCCeEEEeecC
Q psy10158 308 K------QTVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 308 G------q~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
| ..+++||++.. +|++||+|||.
T Consensus 257 ~~~~~~~~G~~~vd~~~~~~g~~~viEiN~ 286 (334)
T 2r85_A 257 EELMGGLWGPFCLEGVFTPDLEFVVFEISA 286 (334)
T ss_dssp HHHSSCCCEEEEEEEEECTTSCEEEEEEEC
T ss_pred HhhcccccccEEEEEEECCCCCEEEEEEeC
Confidence 5 56899999987 57899999995
|
| >3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A | Back alignment and structure |
|---|
Probab=98.98 E-value=3.7e-10 Score=127.48 Aligned_cols=200 Identities=13% Similarity=0.100 Sum_probs=129.1
Q ss_pred cceeeccccCCCcH-HHHHHHHhhcCCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 100 VDCLISFHSKGFPL-EKAIKYANLRKPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 100 cD~LIsFfS~GfPL-~KAi~Y~klrkp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
+|++|+. ...|+ ..+.++++..+..++ ++..+..+.+||....++|+++|||+|++..+.... +..+
T Consensus 68 id~vv~g--~e~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~~~~~~~---------ea~~ 136 (431)
T 3mjf_A 68 IGLTIVG--PEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVE---------AALA 136 (431)
T ss_dssp EEEEEEC--SHHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEEEESCHH---------HHHH
T ss_pred cCEEEEC--CchHHHHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEeeCCHH---------HHHH
Confidence 4566552 23344 345566766665554 999999999999999999999999999998885311 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc-------ccCcceEEeeccCCCC
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV-------RKSGSFIYEDFMPTDG 250 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v-------r~~gSyIYEEFI~t~G 250 (1266)
++. .+..|+|+||..|. .|.|+. +.+. .......-..+ ..+..+|.||||+ |
T Consensus 137 ~~~----~~g~PvVvKp~~~~-----------gg~GV~-iv~~---~~el~~a~~~~~~~~~~g~~~~~vlvEe~i~--G 195 (431)
T 3mjf_A 137 YVR----QKGAPIVIKADGLA-----------AGKGVI-VAMT---QEEAETAVNDMLAGNAFGDAGHRIVVEEFLD--G 195 (431)
T ss_dssp HHH----HHCSSEEEEESSSC-----------TTCSEE-EECS---HHHHHHHHHHHHTTHHHHCCCCCEEEEECCC--S
T ss_pred HHH----HcCCeEEEEECCCC-----------CCCcEE-EeCC---HHHHHHHHHHHHhhccccCCCCeEEEEEeeC--C
Confidence 221 13489999999886 466764 3331 11100000011 1245899999999 7
Q ss_pred ceEEEEEE--CCceeEE-e-eccCCCCCCceeecCCCCceeeEee-CCHHHHHHHH--------HHHHHhCCccce---e
Q psy10158 251 TDVKVYTV--GPDYAHA-E-ARKSPALDGKVERDSEGKEIRYPVI-LSNAEKLISR--------KVCLAFKQTVCG---F 314 (1266)
Q Consensus 251 tDVKVYtV--Gp~~vhA-e-~RKSPvvDG~VRRN~hgKEiRypV~-LT~eEK~IA~--------kaakAFGq~VCG---f 314 (1266)
.++.|.++ |..++.. + .+...+.||..--|+-|-+.-.|.. |+++..+-+. ++.+++|....| +
T Consensus 196 ~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~v 275 (431)
T 3mjf_A 196 EEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYA 275 (431)
T ss_dssp EEEEEEEEEESSCEEECCCBEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEE
T ss_pred cEEEEEEEEcCCEEEEEEeeEeceecccCCCCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 88888777 4444432 1 1222334666666777767777887 8987665444 455777876555 9
Q ss_pred eEEeeCCC-eEEEeecCc
Q psy10158 315 DLLRANGK-SFVCDVNGF 331 (1266)
Q Consensus 315 DLLRs~gg-syVcDVNGw 331 (1266)
|++...++ +||+|||--
T Consensus 276 e~~~~~~g~~~viEiN~R 293 (431)
T 3mjf_A 276 GLMISADGQPKVIEFNCR 293 (431)
T ss_dssp EEEECTTSCEEEEEECGG
T ss_pred EEEEeCCCCeEEEEEecC
Confidence 99998665 999999953
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=98.97 E-value=4.8e-10 Score=126.47 Aligned_cols=189 Identities=12% Similarity=0.124 Sum_probs=124.4
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.||+++.-| ...+ ..++++++.. .++.++.....+.+||....++|++.|||+|++..+.... +..+.
T Consensus 96 ~~D~V~~~~-e~~~-~~~~~~l~~~-~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~v~~~~---------e~~~~ 163 (419)
T 4e4t_A 96 LCEAVSTEF-ENVP-AASLDFLART-TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIESAA---------ALAAL 163 (419)
T ss_dssp HCSEEEECC-TTCC-HHHHHHHHTT-SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCEEEECSHH---------HHHTS
T ss_pred cCCEEEEcc-CcCC-HHHHHHHHcc-CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCeEEECCHH---------HHHHH
Confidence 589998443 2233 5666677666 6888999999999999999999999999999999886411 11111
Q ss_pred EEEcCeE----ecCCEEEecc-cccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceE
Q psy10158 179 VEVNGIV----FNKPFVEKPV-SAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDV 253 (1266)
Q Consensus 179 I~v~G~~----~~kPfVeKpv-~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDV 253 (1266)
+ .. + .|+|+||. .|. .|.|+. +.+. ....-..-..+ .++.+|.||||+- +..|
T Consensus 164 ~----~~~~~~~-~P~VvKp~~~g~-----------~G~Gv~-~v~~---~~el~~a~~~~-~~~~~lvEe~i~~-~~Ei 221 (419)
T 4e4t_A 164 D----DAALDAV-LPGILKTARLGY-----------DGKGQV-RVST---AREARDAHAAL-GGVPCVLEKRLPL-KYEV 221 (419)
T ss_dssp C----HHHHHTT-CSEEEEESSSCC-----------TTTTEE-EECS---HHHHHHHHHHT-TTCCEEEEECCCE-EEEE
T ss_pred H----Hhhcccc-CCEEEEecCCCC-----------CCCceE-EECC---HHHHHHHHHhc-CCCcEEEeecCCC-CeEE
Confidence 1 12 5 79999999 676 366764 3332 11100000011 3578999999985 6788
Q ss_pred EEEEECC---ceeEE---eeccCCCCCCceeecCCCCceeeEee-CCHH----HHHHHHHHHHHhCCc-cceeeEEeeC-
Q psy10158 254 KVYTVGP---DYAHA---EARKSPALDGKVERDSEGKEIRYPVI-LSNA----EKLISRKVCLAFKQT-VCGFDLLRAN- 320 (1266)
Q Consensus 254 KVYtVGp---~~vhA---e~RKSPvvDG~VRRN~hgKEiRypV~-LT~e----EK~IA~kaakAFGq~-VCGfDLLRs~- 320 (1266)
-|.+++. +++.. +.+.. +|.+. +.-.|.. |+++ =+++|.++++++|.. +++||++...
T Consensus 222 sv~v~~~~~G~~~~~~~~e~~~~---~g~~~------~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~~d 292 (419)
T 4e4t_A 222 SALIARGADGRSAAFPLAQNVHH---NGILA------LTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLED 292 (419)
T ss_dssp EEEEEECTTSCEEECCCEEEEEE---TTEEE------EEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETT
T ss_pred EEEEEEcCCCCEEEEeCeEEEee---CCeEE------EEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEeCC
Confidence 8888853 22221 11111 22221 1123455 7763 357889999999986 9999999874
Q ss_pred CCeEEEeecC
Q psy10158 321 GKSFVCDVNG 330 (1266)
Q Consensus 321 ggsyVcDVNG 330 (1266)
|.+||+|||-
T Consensus 293 G~~~v~EiNp 302 (419)
T 4e4t_A 293 GSFVANEMAP 302 (419)
T ss_dssp CCEEEEEEES
T ss_pred CCEEEEEEeC
Confidence 5699999995
|
| >1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=6.2e-10 Score=124.69 Aligned_cols=196 Identities=14% Similarity=0.199 Sum_probs=124.8
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e 174 (1266)
.+|++++.|+. ++. ..+.+.++..+. ++-|+.....+.+||....++|+++|||+|++. .+... .+
T Consensus 73 ~~d~v~~~~g~-~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~---------~~ 142 (451)
T 1ulz_A 73 GADAIHPGYGF-LAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSL---------EE 142 (451)
T ss_dssp TCCEEECCSST-TTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCH---------HH
T ss_pred CCCEEEECCCc-cccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCH---------HH
Confidence 47888886531 121 234556666664 556899999999999999999999999999986 44320 01
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-------cCcceEEeecc
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-------KSGSFIYEDFM 246 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-------~~gSyIYEEFI 246 (1266)
..+++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+. .++.+|.||||
T Consensus 143 ~~~~~~----~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~i 202 (451)
T 1ulz_A 143 AKALAR----EIGYPVLLKATAGG-----------GGRGIR-ICR---NEE-ELVKNYEQASREAEKAFGRGDLLLEKFI 202 (451)
T ss_dssp HHHHHH----HHCSSEEEEECSSS-----------SCCSCE-EES---SHH-HHHHHHHHHHHHHHHTTSCCCEEEEECC
T ss_pred HHHHHH----HcCCCEEEEECCCC-----------CCccEE-EeC---CHH-HHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence 111111 13489999999997 366764 333 221 11100 0110 15689999999
Q ss_pred CCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCc-eeeEee-CCHH----HHHHHHHHHHHhCCc-cceeeE
Q psy10158 247 PTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKE-IRYPVI-LSNA----EKLISRKVCLAFKQT-VCGFDL 316 (1266)
Q Consensus 247 ~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKE-iRypV~-LT~e----EK~IA~kaakAFGq~-VCGfDL 316 (1266)
+- +.++.|.+++. ++++...|..+ +.++ |.+- ...|.. |+++ =+++|.++++++|.. +++||+
T Consensus 203 ~g-~~e~~v~v~~~~~G~~~~~~~~~~~-----~~~~-~~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~ 275 (451)
T 1ulz_A 203 EN-PKHIEYQVLGDKHGNVIHLGERDCS-----IQRR-NQKLVEIAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEF 275 (451)
T ss_dssp CS-CEEEEEEEEECTTSCEEEEEEEEEE-----EEET-TEEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cC-CeEEEEEEEEcCCCCEEEEeeeecc-----cccc-cccceeECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEE
Confidence 73 37888888863 56666655432 2222 1111 112443 7754 356899999999986 788999
Q ss_pred Eee-CCCeEEEeecCc
Q psy10158 317 LRA-NGKSFVCDVNGF 331 (1266)
Q Consensus 317 LRs-~ggsyVcDVNGw 331 (1266)
+.. +|++||+|||.-
T Consensus 276 ~~~~~g~~~viEiN~R 291 (451)
T 1ulz_A 276 IADQEGNLYFIEMNTR 291 (451)
T ss_dssp EECTTCCEEEEEEECS
T ss_pred EEeCCCCEEEEEeeCC
Confidence 987 566999999973
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1e-09 Score=121.40 Aligned_cols=187 Identities=12% Similarity=0.198 Sum_probs=122.4
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.||+++.=| ...+. .++++++... .+.++.....+.+||....++|+++|||+|++..+..... + ...
T Consensus 73 ~~dvi~~~~-E~~~~-~~l~~l~~~~-~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~------~---~~~ 140 (377)
T 3orq_A 73 KCDVITYEF-ENISA-QQLKLLCEKY-NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTD------I---DKA 140 (377)
T ss_dssp HCSEEEESS-TTSCH-HHHHHHHHHS-CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCEEEECSSTH------H---HHH
T ss_pred hCCcceecc-cccCH-HHHHHHhhhc-CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCHHH------H---HHH
Confidence 378765433 34444 3455555543 4558999999999999999999999999999998864211 1 111
Q ss_pred EEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc--cCcceEEeeccCCCC-ceEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR--KSGSFIYEDFMPTDG-TDVKV 255 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr--~~gSyIYEEFI~t~G-tDVKV 255 (1266)
+. .+..|+|+||..|. +.|.|+. +.+. .... . ..+. .++.+|.||||+ | ..+.|
T Consensus 141 ~~----~~g~P~vvKp~~gg----------~~g~Gv~-~v~~---~~el-~--~a~~~~~~~~~ivEe~i~--g~~E~sv 197 (377)
T 3orq_A 141 IE----TLGYPFIVKTRFGG----------YDGKGQV-LINN---EKDL-Q--EGFKLIETSECVAEKYLN--IKKEVSL 197 (377)
T ss_dssp HH----HTCSSEEEEESSSC----------CTTTTEE-EECS---TTSH-H--HHHHHHTTSCEEEEECCC--EEEEEEE
T ss_pred HH----HcCCCEEEEeCCCC----------CCCCCeE-EECC---HHHH-H--HHHHhcCCCcEEEEccCC--CCEEEEE
Confidence 11 13489999999884 0256663 3332 1111 0 0111 247899999998 5 78999
Q ss_pred EEE-CC--ceeEEeeccCCCC-----CCceeecCCCCceeeEeeCCH--HHHHHHHHHHHHhCCc-cceeeEEee-CCCe
Q psy10158 256 YTV-GP--DYAHAEARKSPAL-----DGKVERDSEGKEIRYPVILSN--AEKLISRKVCLAFKQT-VCGFDLLRA-NGKS 323 (1266)
Q Consensus 256 YtV-Gp--~~vhAe~RKSPvv-----DG~VRRN~hgKEiRypV~LT~--eEK~IA~kaakAFGq~-VCGfDLLRs-~ggs 323 (1266)
.++ +. +++. -|+. +|.+ .+.-.|..+++ +-+++|.++++++|.. +++||++.. +|++
T Consensus 198 ~~~~~~~g~~~~-----~~~~e~~~~~g~~------~~~~~Pa~l~~~~~~~~~a~~i~~~lg~~G~~~ve~~~~~~g~~ 266 (377)
T 3orq_A 198 TVTRGNNNQITF-----FPLQENEHRNQIL------FKTIVPARIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQL 266 (377)
T ss_dssp EEEECGGGCEEE-----CCCEEEEEETTEE------EEEEESCSSCCHHHHHHHHHHHHTTSCCCEEEEEEEEEETTCCE
T ss_pred EEEEeCCCCEEE-----ECCEeEEEECCEE------EEEECCCCCCHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcE
Confidence 998 32 2222 1211 2322 12233445554 5568999999999997 999999998 6789
Q ss_pred EEEeecCc
Q psy10158 324 FVCDVNGF 331 (1266)
Q Consensus 324 yVcDVNGw 331 (1266)
||+|||--
T Consensus 267 ~v~EinpR 274 (377)
T 3orq_A 267 YVNEIAPR 274 (377)
T ss_dssp EEEEEESS
T ss_pred EEEEeeCC
Confidence 99999964
|
| >3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=3.1e-09 Score=118.39 Aligned_cols=188 Identities=12% Similarity=0.073 Sum_probs=124.9
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCe
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDH 178 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~ 178 (1266)
.||++++-|. -.| ..++++++... ++.++..+..+.+||...-++|+++|||+|++..+.... +..+.
T Consensus 42 ~~d~it~e~e-~v~-~~~l~~l~~~~-~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~~v~~~~---------e~~~~ 109 (355)
T 3eth_A 42 QQSVITAEIE-RWP-ETALTRQLARH-PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERS---------EWPAV 109 (355)
T ss_dssp TTSEEEESCS-CCC-CCHHHHHHHTC-TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEEEECCGG---------GHHHH
T ss_pred cCCEEEECcC-CcC-HHHHHHHHhcC-CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCEEEECCHH---------HHHHH
Confidence 6777776664 233 34677777776 789999999999999999999999999999999886421 01111
Q ss_pred EEEcCeEecCCEEEecccc-cCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCceEEEEE
Q psy10158 179 VEVNGIVFNKPFVEKPVSA-EDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYT 257 (1266)
Q Consensus 179 I~v~G~~~~kPfVeKpv~G-edHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYt 257 (1266)
+ ..+..|+|+||..| . .|.|+. +.+. ++. .++.. ... + .+|.||||+- |..|-|.+
T Consensus 110 ~----~~~G~P~VvKp~~~G~-----------~GkGv~-~v~~-~~~-~el~~-a~~--~-~vivEe~I~~-~~Eisv~v 166 (355)
T 3eth_A 110 F----DRLGELAIVKRRTGGY-----------DGRGQW-RLRA-NET-EQLPA-ECY--G-ECIVEQGINF-SGEVSLVG 166 (355)
T ss_dssp H----HHHCSEEEEEESSSCC-----------TTTTEE-EEET-TCG-GGSCG-GGT--T-TEEEEECCCC-SEEEEEEE
T ss_pred H----HHcCCCEEEEecCCCC-----------CCCeEE-EEcC-CCH-HHHHH-Hhh--C-CEEEEEccCC-CcEEEEEE
Confidence 1 12348999999985 6 367774 3332 001 11111 111 2 6999999983 67788888
Q ss_pred ECC---ceeE---EeeccCCCCCCceeecCCCCceeeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEEeeCCCeEEE
Q psy10158 258 VGP---DYAH---AEARKSPALDGKVERDSEGKEIRYPVILSNAE----KLISRKVCLAFKQT-VCGFDLLRANGKSFVC 326 (1266)
Q Consensus 258 VGp---~~vh---Ae~RKSPvvDG~VRRN~hgKEiRypV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs~ggsyVc 326 (1266)
++. ++++ .+..+. +|.+. +.-.|..|+++. +++|.++++++|.. +++||++...+++||+
T Consensus 167 ~~~~~G~~~~~p~~e~~~~---~g~~~------~~~~pa~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~~~~~v~ 237 (355)
T 3eth_A 167 ARGFDGSTVFYPLTHNLHQ---DGILR------TSVAFPQANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQGLLIN 237 (355)
T ss_dssp EECTTSCEEECCCEEEEEE---TTEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTEEEEE
T ss_pred EEcCCCCEEEECCEEEEee---CCeEE------EEECCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECCcEEEE
Confidence 743 2222 111111 23221 122345677653 56889999999874 8999999998999999
Q ss_pred eecC
Q psy10158 327 DVNG 330 (1266)
Q Consensus 327 DVNG 330 (1266)
|||-
T Consensus 238 Einp 241 (355)
T 3eth_A 238 ELAP 241 (355)
T ss_dssp EEES
T ss_pred EeeC
Confidence 9995
|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-09 Score=123.23 Aligned_cols=196 Identities=14% Similarity=0.243 Sum_probs=125.3
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCcccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELV 173 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~ 173 (1266)
.+|++++-| ||-. ....+.++..+. ++-|+.....+++||....++|+++|||+|++. .+... .
T Consensus 78 ~~d~i~p~~--g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~---------~ 146 (446)
T 3ouz_A 78 EADAIFPGY--GFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGA---------E 146 (446)
T ss_dssp TCSEEECCS--STTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSH---------H
T ss_pred CcCEEEECC--cccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCH---------H
Confidence 478888876 3322 445566666654 445999999999999999999999999999986 34220 0
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-------cCcceEEeecc
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-------KSGSFIYEDFM 246 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-------~~gSyIYEEFI 246 (1266)
+..+.+. .+..|+|+||..|. .|.|++ +.+. ....-..-..+. .++.+|.||||
T Consensus 147 e~~~~~~----~~g~PvvvKp~~g~-----------gg~Gv~-~v~~---~~el~~~~~~~~~~~~~~~~~~~~lvEe~i 207 (446)
T 3ouz_A 147 AAKKLAK----EIGYPVILKAAAGG-----------GGRGMR-VVEN---EKDLEKAYWSAESEAMTAFGDGTMYMEKYI 207 (446)
T ss_dssp HHHHHHH----HHCSSEEEEETTCC-----------TTCSEE-EECS---GGGHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHHH----HhCCCEEEEECCCC-----------CCCCEE-EECC---HHHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 0111111 13489999999987 366764 4332 211110000111 16789999999
Q ss_pred CCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCce-eeEe-eCCHHHH----HHHHHHHHHhCC-ccceeeE
Q psy10158 247 PTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEI-RYPV-ILSNAEK----LISRKVCLAFKQ-TVCGFDL 316 (1266)
Q Consensus 247 ~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV-~LT~eEK----~IA~kaakAFGq-~VCGfDL 316 (1266)
+- ..++.|.+++. .+++.-.|... +.++ |++-. ..|. .|+++.. ++|.++++++|. .+++||+
T Consensus 208 ~g-~~e~~v~v~~d~~g~~~~~~~~~~~-----~~~~-~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~ 280 (446)
T 3ouz_A 208 QN-PRHIEVQVIGDSFGNVIHVGERDCS-----MQRR-HQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEF 280 (446)
T ss_dssp SS-CEEEEEEEEECTTSCEEEEEEEEEE-----EEET-TEEEEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CC-CcEEEEEEEEcCCCCEEEEeeceee-----eeec-CceEEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEE
Confidence 84 26888888864 45665555321 2221 11111 2233 4676543 588999999997 4677999
Q ss_pred EeeC-CCeEEEeecCc
Q psy10158 317 LRAN-GKSFVCDVNGF 331 (1266)
Q Consensus 317 LRs~-ggsyVcDVNGw 331 (1266)
+... |++||+|||.-
T Consensus 281 ~~~~~g~~~~iEiNpR 296 (446)
T 3ouz_A 281 LVDKNLDFYFIEMNTR 296 (446)
T ss_dssp EECTTCCEEEEEEESS
T ss_pred EEeCCCCEEEEEeECC
Confidence 9986 68999999963
|
| >2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.93 E-value=7.8e-10 Score=123.90 Aligned_cols=196 Identities=12% Similarity=0.136 Sum_probs=124.1
Q ss_pred ccceeeccccCCCcH-HHHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL-EKAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL-~KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e 174 (1266)
.+|++++.|+. ++. ..+.+.++..+. ++-++.....+.+||....++|+++|||+|.+. .+... .+
T Consensus 73 ~~d~v~~~~g~-~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~---------~~ 142 (451)
T 2vpq_A 73 GCDGVHPGYGF-LAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDV---------SE 142 (451)
T ss_dssp TCSEEECCSST-TTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCH---------HH
T ss_pred CCCEEEECCCc-cccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCH---------HH
Confidence 57888887641 121 234566666654 556789999999999999999999999998865 44320 00
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-------cCcceEEeecc
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-------KSGSFIYEDFM 246 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-------~~gSyIYEEFI 246 (1266)
..+++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+. .++.+|.||||
T Consensus 143 ~~~~~~----~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~i 202 (451)
T 2vpq_A 143 AKKIAK----KIGYPVIIKATAGG-----------GGKGIR-VAR---DEK-ELETGFRMTEQEAQTAFGNGGLYMEKFI 202 (451)
T ss_dssp HHHHHH----HHCSSEEEEETTCC-----------TTCSEE-EES---SHH-HHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHH----hcCCcEEEEECCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHHHHHhhcCCCcEEEEEec
Confidence 111111 13489999999997 366764 333 221 11100 0111 25789999999
Q ss_pred CCCCceEEEEEEC---CceeEEeeccCCCCCCceeecCCCC-ceeeEee-CCHH----HHHHHHHHHHHhCCc-cceeeE
Q psy10158 247 PTDGTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGK-EIRYPVI-LSNA----EKLISRKVCLAFKQT-VCGFDL 316 (1266)
Q Consensus 247 ~t~GtDVKVYtVG---p~~vhAe~RKSPvvDG~VRRN~hgK-EiRypV~-LT~e----EK~IA~kaakAFGq~-VCGfDL 316 (1266)
+- +.++.|.+++ +++++...|... +.++ |++ ....|.. |+++ =+++|.++++++|.. +++||+
T Consensus 203 ~g-~~e~~v~v~~~~~G~~~~~~~~~~~-----~~~~-~~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~ 275 (451)
T 2vpq_A 203 EN-FRHIEIQIVGDSYGNVIHLGERDCT-----IQRR-MQKLVEEAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEF 275 (451)
T ss_dssp CS-EEEEEEEEEECTTSCEEEEEEEEEE-----EEET-TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CC-CeEEEEEEEEcCCCCEEEEeccccc-----hhcc-ccceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEE
Confidence 73 3688887775 346665555332 2222 211 1123444 7764 357889999999986 677999
Q ss_pred Eee--CCCeEEEeecCc
Q psy10158 317 LRA--NGKSFVCDVNGF 331 (1266)
Q Consensus 317 LRs--~ggsyVcDVNGw 331 (1266)
+.. +|++||+|||.-
T Consensus 276 ~~~~~~g~~~viEiN~R 292 (451)
T 2vpq_A 276 IYDLNDNKFYFMEMNTR 292 (451)
T ss_dssp EEETTTTEEEEEEEECS
T ss_pred EEECCCCCEEEEEeeCC
Confidence 998 466999999974
|
| >2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.7e-09 Score=121.62 Aligned_cols=196 Identities=18% Similarity=0.166 Sum_probs=125.2
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCcccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELV 173 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~ 173 (1266)
.+|++|+-+ ||-. ..+.+.++..+ |++-|+.....+.+||....++|+++|||+|++. .+... .
T Consensus 79 ~id~v~~~~--g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~---------~ 147 (461)
T 2dzd_A 79 DVDAIHPGY--GFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGL---------E 147 (461)
T ss_dssp TCCEEECCS--SSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSH---------H
T ss_pred CCCEEEECC--CccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCH---------H
Confidence 478888866 4421 23445555555 4567999999999999999999999999999986 34320 0
Q ss_pred ccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-cccc-------cCcceEEeec
Q psy10158 174 ESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVR-------KSGSFIYEDF 245 (1266)
Q Consensus 174 e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr-------~~gSyIYEEF 245 (1266)
+..+++. .+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+. .+..+|.|||
T Consensus 148 ~~~~~~~----~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~ 207 (461)
T 2dzd_A 148 DVVAFAE----AHGYPIIIKAALGG-----------GGRGMR-IVR---SKS-EVKEAFERAKSEAKAAFGSDEVYVEKL 207 (461)
T ss_dssp HHHHHHH----HHCSCEEEEESTTC-----------SSSSEE-EEC---CGG-GHHHHHHHHHHHHHHHTSCCCEEEEEC
T ss_pred HHHHHHH----hcCCcEEEEeCCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHHHHHhhcCCCcEEEEEC
Confidence 1111111 13489999999997 366764 333 221 11100 0110 1578999999
Q ss_pred cCCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCceeeEe-eCCHH----HHHHHHHHHHHhCCccc-eeeE
Q psy10158 246 MPTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRYPV-ILSNA----EKLISRKVCLAFKQTVC-GFDL 316 (1266)
Q Consensus 246 I~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV-~LT~e----EK~IA~kaakAFGq~VC-GfDL 316 (1266)
|+- +.++.|-+++. ++++...|..+. .+++..-.+ ..|. .|+++ -+++|.++++++|..-+ +||+
T Consensus 208 i~g-~~e~~v~v~~~~~G~~~~~~~~~~~~----~~~~~~~~~-~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~ 281 (461)
T 2dzd_A 208 IEN-PKHIEVQILGDYEGNIVHLYERDCSV----QRRHQKVVE-VAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEF 281 (461)
T ss_dssp CCS-CEEEEEEEEECTTCCEEEEEEEEEEE----EETTEEEEE-EESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCC-CeEEEEEEEEcCCCCEEEEEeccccc----cccccceEE-ECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEE
Confidence 973 47788877763 467766664321 121111011 1233 56654 35689999999999754 5999
Q ss_pred EeeCCCeEEEeecCc
Q psy10158 317 LRANGKSFVCDVNGF 331 (1266)
Q Consensus 317 LRs~ggsyVcDVNGw 331 (1266)
+...|++||+|||.-
T Consensus 282 ~~~~~~~~viEiN~R 296 (461)
T 2dzd_A 282 LVSGDEFYFIEVNPR 296 (461)
T ss_dssp EEETTEEEEEEEESS
T ss_pred EEeCCCEEEEEEECC
Confidence 998899999999984
|
| >3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.8e-09 Score=123.97 Aligned_cols=196 Identities=11% Similarity=0.094 Sum_probs=98.7
Q ss_pred cceeeccccCCC-cH-HHHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCccccccc
Q psy10158 100 VDCLISFHSKGF-PL-EKAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVE 174 (1266)
Q Consensus 100 cD~LIsFfS~Gf-PL-~KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e 174 (1266)
||++++-| || +. ....+.++..+. |+-++.....++.||..+.++|+++|||+|++. .+... . +
T Consensus 75 ~daI~pg~--gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~-~--------e 143 (681)
T 3n6r_A 75 AQAVHPGY--GFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDA-D--------E 143 (681)
T ss_dssp CSCCBCCS--SSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC-------------------
T ss_pred cCEEEECC--CccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCH-H--------H
Confidence 67777765 33 11 345566666654 444899999999999999999999999999975 33211 0 1
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-------cCcceEEeeccC
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-------KSGSFIYEDFMP 247 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-------~~gSyIYEEFI~ 247 (1266)
..... ..+..|+|+||..|. .|.|++ +.+....-...+. ..+ .++.+|.||||+
T Consensus 144 ~~~~a----~~igyPvVvKp~~gg-----------ggkGv~-iv~~~~el~~a~~---~~~~ea~~~fg~~~vlvEe~I~ 204 (681)
T 3n6r_A 144 AVKIS----NQIGYPVMIKASAGG-----------GGKGMR-IAWNDQEAREGFQ---SSKNEAANSFGDDRIFIEKFVT 204 (681)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred HHHHH----HhcCCcEEEEECCCC-----------CCCCEE-EECCHHHHHHHHH---HHHHHHHHhCCCCcEEEEeccC
Confidence 11112 124589999999987 366764 5443221111111 111 157899999998
Q ss_pred CCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCceeeEee-CCHHHH----HHHHHHHHHhCCc-cceeeEEe
Q psy10158 248 TDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIRYPVI-LSNAEK----LISRKVCLAFKQT-VCGFDLLR 318 (1266)
Q Consensus 248 t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~-LT~eEK----~IA~kaakAFGq~-VCGfDLLR 318 (1266)
- ..++-|-+++. ++++...|...+ .|++....+. .|.. |+++.+ ++|.++++++|.. ++.||++.
T Consensus 205 g-~rei~V~v~~d~~G~vv~l~~rd~s~----qr~~~k~~e~-~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~ 278 (681)
T 3n6r_A 205 Q-PRHIEIQVLCDSHGNGIYLGERECSI----QRRNQKVVEE-APSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIV 278 (681)
T ss_dssp S-CEEEEEEEECCSSSCCEEEEEEECCC----EETTEECEEE-ESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEE
T ss_pred C-CcEEEEEEEEeCCCCEEEEeeeecce----eccCccEEEe-cCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEE
Confidence 4 37888888874 667777776421 2333222222 2443 887765 7899999999996 67799998
Q ss_pred eC-CCeEEEeecCc
Q psy10158 319 AN-GKSFVCDVNGF 331 (1266)
Q Consensus 319 s~-ggsyVcDVNGw 331 (1266)
.. |.+|++|||-=
T Consensus 279 d~dg~~~~lEiNpR 292 (681)
T 3n6r_A 279 DGQKNFYFLEMNTR 292 (681)
T ss_dssp CTTSCCCCCEEECS
T ss_pred eCCCCEEEEecccc
Confidence 84 56999999963
|
| >3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A | Back alignment and structure |
|---|
Probab=98.72 E-value=6.5e-09 Score=121.66 Aligned_cols=207 Identities=11% Similarity=0.081 Sum_probs=118.8
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcCCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEE----eccCCCCC----
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRKPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAV----LDRESPDP---- 167 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrkp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~----~~rd~~~~---- 167 (1266)
.+|++++-| ||-- ....+.++..+...+ ++.....++.||..+.++|+++|||+|++.. +...+.++
T Consensus 123 ~~daI~pg~--gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~~~~~~ 200 (540)
T 3glk_A 123 PVQAVWAGW--GHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGK 200 (540)
T ss_dssp TCSEEECCS--SGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTTC----
T ss_pred CCCEEEeCC--CccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCccccccccccccccccccc
Confidence 478888765 3322 234455666665555 9999999999999999999999999999865 11100000
Q ss_pred -----ccc---cccc-cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc---
Q psy10158 168 -----VKH---ELVE-SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR--- 235 (1266)
Q Consensus 168 -----~~~---~l~e-~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr--- 235 (1266)
... ..+. .++.... -..+..|+|+||..|. .|.|++ +.+ +....-..-..+.
T Consensus 201 ~~~~~~~~~~~~~v~s~~ea~~~-a~~igyPvVVKp~~gg-----------GG~Gv~-iv~---~~~eL~~a~~~~~~~~ 264 (540)
T 3glk_A 201 RISVPEDVYDKGCVKDVDEGLEA-AERIGFPLMIKASEGG-----------GGKGIR-KAE---SAEDFPILFRQVQSEI 264 (540)
T ss_dssp CCCCCHHHHHHTSCCSHHHHHHH-HHHHCSSEEEEETTCC---------------EE-EEC---STTTHHHHHHHHHHHS
T ss_pred ccccccccccccCcCCHHHHHHH-HHhcCCcEEEEECCCC-----------CCCCEE-EEC---CHHHHHHHHHHHHhhc
Confidence 000 0000 0111100 0124589999999986 355653 333 2211100000111
Q ss_pred cCcceEEeeccCCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCcee-eEee-CCHHH----HHHHHHHHHH
Q psy10158 236 KSGSFIYEDFMPTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIR-YPVI-LSNAE----KLISRKVCLA 306 (1266)
Q Consensus 236 ~~gSyIYEEFI~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiR-ypV~-LT~eE----K~IA~kaakA 306 (1266)
.++.+|.||||+- +..+-|-++++ ++++.-.|..- ..+++ .|-+- .|.. |+++. .++|.+++++
T Consensus 265 ~~~~vlVEe~I~g-~rei~V~vl~d~~G~vv~l~~rd~s----~qr~~--~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~a 337 (540)
T 3glk_A 265 PGSPIFLMKLAQH-ARHLEVQILADQYGNAVSLFGRDCS----IQRRH--QKIVEEAPATIAPLAIFEFMEQCAIRLAKT 337 (540)
T ss_dssp TTCCEEEEECCSS-EEEEEEEEEECTTSCEEEEEEEEEE----EC-----CCSEEEESCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEecCC-CcEEEEEEEEcCCCCEEEEeceeee----eeecc--cceEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2678999999952 38888888875 56776555431 12222 22221 2333 56543 4688999999
Q ss_pred hCC-ccceeeEEee-CCCeEEEeecC
Q psy10158 307 FKQ-TVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 307 FGq-~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
+|. .+++||++.. +|.+||+|||-
T Consensus 338 lG~~G~~~VEf~~d~dg~~~~lEiNp 363 (540)
T 3glk_A 338 VGYVSAGTVEYLYSQDGSFHFLELNP 363 (540)
T ss_dssp HTCCEEEEEEEEEETTSCEEEEEEEC
T ss_pred cCCccceEEEEEEcCCCCEEEEEEEC
Confidence 998 5888999987 56799999996
|
| >3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=8.2e-09 Score=122.23 Aligned_cols=209 Identities=10% Similarity=0.065 Sum_probs=126.4
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcCCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEE--e--ccC------CC--
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRKPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAV--L--DRE------SP-- 165 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrkp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~--~--~rd------~~-- 165 (1266)
.+|++++-|+.-.--....+.++..+..++ ++..+..++.||..+.++|+++|||+|++.. + ... ..
T Consensus 139 ~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~~~~~~~ 218 (587)
T 3jrx_A 139 PVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRI 218 (587)
T ss_dssp TCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC------CCCCC
T ss_pred CCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeeccccccccccccccccccc
Confidence 478888776432222334566666665555 9999999999999999999999999999765 1 000 00
Q ss_pred -CCccc---ccccc-CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc---ccC
Q psy10158 166 -DPVKH---ELVES-EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV---RKS 237 (1266)
Q Consensus 166 -~~~~~---~l~e~-~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v---r~~ 237 (1266)
.+... ..+.+ ++.... -..+..|+|+||..|. .|.|++ +.+. ....-..-..+ ..+
T Consensus 219 ~~~~~~~~~~~v~s~eea~~~-a~~iGyPvVVKp~~Gg-----------GGkGv~-iV~s---~eEL~~a~~~a~~~~~~ 282 (587)
T 3jrx_A 219 SVPEDVYDKGCVKDVDEGLEA-AERIGFPLMIKASEGG-----------GGKGIR-KAES---AEDFPILFRQVQSEIPG 282 (587)
T ss_dssp CCCHHHHHTTSCCSHHHHHHH-HHHHCSSEEEEETTCC-----------SSSSEE-EECS---TTTHHHHHHHHHHHSTT
T ss_pred ccchhhccccccCCHHHHHHH-HHhcCCeEEEEeCCCC-----------CCCCeE-EeCC---HHHHHHHHHHHHhhccC
Confidence 00000 00101 111100 0124589999999997 366764 4332 21111000011 126
Q ss_pred cceEEeeccCCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCcee-eEee-CCHHH----HHHHHHHHHHhC
Q psy10158 238 GSFIYEDFMPTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEIR-YPVI-LSNAE----KLISRKVCLAFK 308 (1266)
Q Consensus 238 gSyIYEEFI~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEiR-ypV~-LT~eE----K~IA~kaakAFG 308 (1266)
+.+|.||||+- ...|-|-++++ ++++.-.|..- ..|++ .|-+- .|.. |+++. .++|.++++++|
T Consensus 283 ~~vlVEeyI~g-~rei~V~vl~D~~G~vv~l~~rd~s----iqrr~--qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alG 355 (587)
T 3jrx_A 283 SPIFLMKLAQH-ARHLEVQILADQYGNAVSLFGRDCS----IQRRH--QKIVEEAPATIAPLAIFEFMEQCAIRLAKTVG 355 (587)
T ss_dssp CCEEEEECCCS-CEEEEEEEEECSSSCEEEEEEEEEE----EESSS--CEEEEEESCCSSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEecCC-CcEEEEEEEEcCCCCEEEEeeeecc----ccccc--cceeEecCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 78999999963 38888888875 56776555431 12222 22211 2333 56543 468899999999
Q ss_pred C-ccceeeEEee-CCCeEEEeecC
Q psy10158 309 Q-TVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 309 q-~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
. .+++||++.. +|.+||+|||-
T Consensus 356 y~G~~~VEfl~d~dG~~yflEINp 379 (587)
T 3jrx_A 356 YVSAGTVEYLYSQDGSFHFLELNP 379 (587)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEES
T ss_pred CcceeEEEEEEeCCCCEEEEEEeC
Confidence 8 5888999987 56799999996
|
| >1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=6.9e-09 Score=129.68 Aligned_cols=197 Identities=12% Similarity=0.158 Sum_probs=117.8
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCC
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESED 177 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D 177 (1266)
.+|.+|+.++.-.++ +..+.++..+ |++-|+..+..++.||.+..++|++.|||+|++..+.... +..+
T Consensus 634 ~~d~Vi~~~g~~~~~-~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~~~~s~e---------ea~~ 703 (1073)
T 1a9x_A 634 KPKGVIVQYGGQTPL-KLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIE---------MAVE 703 (1073)
T ss_dssp CCSEEECSSSTHHHH-TTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEEECCSHH---------HHHH
T ss_pred CcceEEeecCCchHH-HHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCceEECCHH---------HHHH
Confidence 468888876532333 4445555555 4555999999999999999999999999999999885310 1111
Q ss_pred eEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccC--C-cccccCcceEEeeccCCC-CceE
Q psy10158 178 HVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSP--E-SRVRKSGSFIYEDFMPTD-GTDV 253 (1266)
Q Consensus 178 ~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p--~-s~vr~~gSyIYEEFI~t~-GtDV 253 (1266)
.+. .+..|+|+||..|. .|.|+. +.+ +....-.. . .....+..+|.||||+-. --+|
T Consensus 704 ~~~----~ig~PvvVKP~~~~-----------gG~Gv~-iv~---~~~el~~~~~~a~~~~~~~~vlvEefI~g~~E~~V 764 (1073)
T 1a9x_A 704 KAK----EIGYPLVVRASYVL-----------GGRAME-IVY---DEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDV 764 (1073)
T ss_dssp HHH----HHCSSEEEEC------------------CEE-EEC---SHHHHHHHHHHCC--------EEEBCCTTCEEEEE
T ss_pred HHH----HcCCCEEEEECCCC-----------CCCCeE-EEC---CHHHHHHHHHHHHhhCCCCcEEEEEccCCCcEEEE
Confidence 111 13489999999986 355653 222 21110000 0 011135689999999743 3455
Q ss_pred EEEEECCc-eeEEeeccCCCCCCceeecCCCCceeeEe---eCCH----HHHHHHHHHHHHhCC-ccceeeEEeeCCCeE
Q psy10158 254 KVYTVGPD-YAHAEARKSPALDGKVERDSEGKEIRYPV---ILSN----AEKLISRKVCLAFKQ-TVCGFDLLRANGKSF 324 (1266)
Q Consensus 254 KVYtVGp~-~vhAe~RKSPvvDG~VRRN~hgKEiRypV---~LT~----eEK~IA~kaakAFGq-~VCGfDLLRs~ggsy 324 (1266)
-++.-|.. ++.+..+.- .+.+.|-|+....+ .|++ +-+++|.++++++|. .+++||++..+|++|
T Consensus 765 ~~l~d~~~v~~~~i~e~~------~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~~~~~~ 838 (1073)
T 1a9x_A 765 DAICDGEMVLIGGIMEHI------EQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVY 838 (1073)
T ss_dssp EEEECSSCEEEEEEEEES------SCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECSSCEE
T ss_pred EEEEECCeEEEEeeEEEE------eccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCeEE
Confidence 55544443 333433221 12345555544443 5665 456789999999999 799999999889999
Q ss_pred EEeecC
Q psy10158 325 VCDVNG 330 (1266)
Q Consensus 325 VcDVNG 330 (1266)
|+|||-
T Consensus 839 viEvNp 844 (1073)
T 1a9x_A 839 LIEVNP 844 (1073)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999994
|
| >1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A | Back alignment and structure |
|---|
Probab=98.71 E-value=6.2e-09 Score=121.07 Aligned_cols=208 Identities=12% Similarity=0.106 Sum_probs=121.4
Q ss_pred ccceeeccccC--CCcH-HHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCC---------
Q psy10158 99 IVDCLISFHSK--GFPL-EKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPD--------- 166 (1266)
Q Consensus 99 ~cD~LIsFfS~--GfPL-~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~--------- 166 (1266)
.+|++|+.++- -.++ ..+++-...+-+++-++.....+++||..+.++|+++|||+|++..+..+.-.
T Consensus 130 ~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~l~~ 209 (554)
T 1w96_A 130 DVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVS 209 (554)
T ss_dssp TCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECTTTCCEE
T ss_pred CCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccccccccc
Confidence 38999987521 1222 33332221113577788889999999999999999999999997654100000
Q ss_pred -Cccc----cccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-ccc---ccC
Q psy10158 167 -PVKH----ELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRV---RKS 237 (1266)
Q Consensus 167 -~~~~----~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~v---r~~ 237 (1266)
|... .....++.... -..+..|+|+||..|. .|.|+. +.+ +.. ++..- ..+ ..+
T Consensus 210 ip~~~~~~~~~~~~~e~~~~-~~~~g~PvVvKp~~g~-----------gg~Gv~-~v~---~~~-el~~a~~~~~~~~~~ 272 (554)
T 1w96_A 210 VDDDIYQKGCCTSPEDGLQK-AKRIGFPVMIKASEGG-----------GGKGIR-QVE---REE-DFIALYHQAANEIPG 272 (554)
T ss_dssp CCHHHHGGGSCSSHHHHHHH-HHHHCSSEEEEETTCC-----------TTTTEE-EEC---SHH-HHHHHHHHHHHHSTT
T ss_pred cccccccccCCCCHHHHHHH-HHHcCCCEEEEECCCC-----------CCceEE-EEC---CHH-HHHHHHHHHHhhccC
Confidence 0000 00001111100 0123489999999986 355664 322 211 11100 011 126
Q ss_pred cceEEeeccCCCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCce-eeEee-CCHH----HHHHHHHHHHHhC
Q psy10158 238 GSFIYEDFMPTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEI-RYPVI-LSNA----EKLISRKVCLAFK 308 (1266)
Q Consensus 238 gSyIYEEFI~t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV~-LT~e----EK~IA~kaakAFG 308 (1266)
..+|.||||+. |..+-|.++++ ++++...|... +.+. |.|-+ -.|.. ++++ -+++|.++++++|
T Consensus 273 ~~vlvEe~i~g-~~e~sv~vl~d~~G~vv~l~~~~~~-----~~~~-~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg 345 (554)
T 1w96_A 273 SPIFIMKLAGR-ARHLEVQLLADQYGTNISLFGRDCS-----VQRR-HQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVG 345 (554)
T ss_dssp CCEEEEECCCS-CEEEEEEEEECTTSCEEEEEEEEEE-----EEET-TEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEecCC-CcEEEEEEEEcCCCCEEEEeeeeee-----eEee-ccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcC
Confidence 78999999983 57888877764 45554444322 1111 11111 12333 6643 3668999999999
Q ss_pred C-ccceeeEEee--CCCeEEEeecC
Q psy10158 309 Q-TVCGFDLLRA--NGKSFVCDVNG 330 (1266)
Q Consensus 309 q-~VCGfDLLRs--~ggsyVcDVNG 330 (1266)
. .+++||++.. +|++||+|||.
T Consensus 346 ~~G~~~ve~~~~~~dg~~~~iEiN~ 370 (554)
T 1w96_A 346 YVSAGTVEYLYSHDDGKFYFLELNP 370 (554)
T ss_dssp CCEEEEEEEEECTTTCCEEEEEEEC
T ss_pred CcceEEEEEEEECCCCCEEEEEeeC
Confidence 8 7999999985 57899999997
|
| >1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-08 Score=126.11 Aligned_cols=194 Identities=15% Similarity=0.168 Sum_probs=127.3
Q ss_pred ccceeeccccCCCcHHHHHH-----HHhhcCCccc-cCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccc
Q psy10158 99 IVDCLISFHSKGFPLEKAIK-----YANLRKPFVI-NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHEL 172 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~-----Y~klrkp~~l-Ndl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l 172 (1266)
.+|++++.+.....+.-++. .++..+..++ |+..+..++.||....++|+++|||+|++..++...
T Consensus 82 ~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~~~~-------- 153 (1073)
T 1a9x_A 82 RPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTME-------- 153 (1073)
T ss_dssp CCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEESSHH--------
T ss_pred CCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEEEECCHH--------
Confidence 57999987764344433332 4555555444 999999999999999999999999999999885310
Q ss_pred cccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCC-c-cc--ccCcceEEeeccCC
Q psy10158 173 VESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-S-RV--RKSGSFIYEDFMPT 248 (1266)
Q Consensus 173 ~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~-s-~v--r~~gSyIYEEFI~t 248 (1266)
+..+.. ..+..|+|+||..|. .|.|+. +.+ |.. ++..- . .. ...+.+|.||||+
T Consensus 154 -ea~~~~----~~ig~PvVvKp~~~~-----------Gg~Gv~-iv~---~~e-el~~~~~~~~~~~~~~~vlvEe~I~- 211 (1073)
T 1a9x_A 154 -EALAVA----ADVGFPCIIRPSFTM-----------GGSGGG-IAY---NRE-EFEEICARGLDLSPTKELLIDESLI- 211 (1073)
T ss_dssp -HHHHHH----HHHCSSEEEEETTCC-----------TTTTCE-EES---SHH-HHHHHHHHHHHHCTTSCEEEEECCT-
T ss_pred -HHHHHH----HHcCCCEEEEECCCC-----------CCCceE-EeC---CHH-HHHHHHHHHHhhCCCCcEEEEEccC-
Confidence 111111 123489999999985 245553 222 211 11100 0 01 1356899999998
Q ss_pred CC-ceEEEEEECCc---ee--EEeeccCCCCCCceeecCCCCcee--eEe-eCCHHH----HHHHHHHHHHhCCc--cce
Q psy10158 249 DG-TDVKVYTVGPD---YA--HAEARKSPALDGKVERDSEGKEIR--YPV-ILSNAE----KLISRKVCLAFKQT--VCG 313 (1266)
Q Consensus 249 ~G-tDVKVYtVGp~---~v--hAe~RKSPvvDG~VRRN~hgKEiR--ypV-~LT~eE----K~IA~kaakAFGq~--VCG 313 (1266)
| ..+.|-++++. ++ -.+.|..| .| .|.|... .|. .|++++ +++|.++++++|.. +|+
T Consensus 212 -G~~E~~v~v~~d~~g~~v~~~~~e~~dp--~~-----v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~ 283 (1073)
T 1a9x_A 212 -GWKEYEMEVVRDKNDNCIIVCSIENFDA--MG-----IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSN 283 (1073)
T ss_dssp -TSEEEEEEEEECTTCCEEEEEEEEESSC--TT-----SCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred -CCeEEEEEEEEeCCCCEEEEEEEecccC--Cc-----cccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceE
Confidence 4 68888888743 32 23344444 22 2333332 244 488754 56889999999997 999
Q ss_pred eeEEee--CCCeEEEeecC
Q psy10158 314 FDLLRA--NGKSFVCDVNG 330 (1266)
Q Consensus 314 fDLLRs--~ggsyVcDVNG 330 (1266)
||++.. +|++||+|||-
T Consensus 284 vdf~~~~~~g~~~viEiNp 302 (1073)
T 1a9x_A 284 VQFAVNPKNGRLIVIEMNP 302 (1073)
T ss_dssp EEEEECTTTCCEEEEEEES
T ss_pred EEEEEECCCCCEEEEEecC
Confidence 999987 48899999994
|
| >3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.6e-08 Score=113.28 Aligned_cols=193 Identities=13% Similarity=0.167 Sum_probs=119.2
Q ss_pred cceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeE
Q psy10158 100 VDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHV 179 (1266)
Q Consensus 100 cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I 179 (1266)
+|+++++ +. ..+..+.+.++..+.. -++..+..++.||....++|+++|||+|++..+.... +..+.+
T Consensus 103 id~Vip~-sE-~~l~~~a~~~e~~Gi~-g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~v~s~e---------e~~~~~ 170 (474)
T 3vmm_A 103 ADAITTN-NE-LFIAPMAKACERLGLR-GAGVQAAENARDKNKMRDAFNKAGVKSIKNKRVTTLE---------DFRAAL 170 (474)
T ss_dssp CSEEEES-CG-GGHHHHHHHHHHTTCC-CSCHHHHHHTTCHHHHHHHHHHTTSCCCCEEEECSHH---------HHHHHH
T ss_pred CCEEEEC-Cc-ccHHHHHHHHHHcCCC-CCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEEECCHH---------HHHHHH
Confidence 5666662 22 2233344455555544 8889999999999999999999999999998885311 011111
Q ss_pred EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcc-------------cccCcceEEeecc
Q psy10158 180 EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESR-------------VRKSGSFIYEDFM 246 (1266)
Q Consensus 180 ~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~-------------vr~~gSyIYEEFI 246 (1266)
. .+..|+|+||..|. .|.|+. +.+ +....-..-.. ...+..+|.||||
T Consensus 171 ~----~lg~PvVVKP~~g~-----------gg~Gv~-iv~---~~eel~~a~~~~~~~~~~~~~~~a~~~~~~vlVEe~I 231 (474)
T 3vmm_A 171 E----EIGTPLILKPTYLA-----------SSIGVT-LIT---DTETAEDEFNRVNDYLKSINVPKAVTFEAPFIAEEFL 231 (474)
T ss_dssp H----HSCSSEEEEESSCC-----------TTTTCE-EEC---CTTSHHHHHHHHHHHHTTSCCCTTCCCSCSEEEEECC
T ss_pred H----HcCCCEEEEECCCC-----------cCceEE-EEC---CHHHHHHHHHHHHHHHhhccccccccCCCeEEEEeCC
Confidence 1 23489999999986 355653 332 22111000000 1225789999999
Q ss_pred CCCC------------ceEEEEEECCcee--EEeeccCCCCCCceeecCCCCceeeEeeCCHHH----HHHHHHHHHHhC
Q psy10158 247 PTDG------------TDVKVYTVGPDYA--HAEARKSPALDGKVERDSEGKEIRYPVILSNAE----KLISRKVCLAFK 308 (1266)
Q Consensus 247 ~t~G------------tDVKVYtVGp~~v--hAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eE----K~IA~kaakAFG 308 (1266)
+-.- -.|.+++.++++. +...|... .+ + .......|..|++++ +++|+++++++|
T Consensus 232 ~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~--~~-~----~~~~~~~Pa~l~~~~~~~l~~~a~~~~~alG 304 (474)
T 3vmm_A 232 QGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQ--IG-F----TETSHITPSILDEEAKKKIVEAAKKANEGLG 304 (474)
T ss_dssp CBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCC--BT-T----BCCEEEESCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccC--CC-c----cceEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8321 2466666666642 22233221 11 1 112233455677754 457899999999
Q ss_pred Cccce--eeEEee-CCCeEEEeecC
Q psy10158 309 QTVCG--FDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 309 q~VCG--fDLLRs-~ggsyVcDVNG 330 (1266)
..-+| ||++.. +|.+||+|||-
T Consensus 305 ~~g~~~~vef~~~~dg~~~~iEvNp 329 (474)
T 3vmm_A 305 LQNCATHTEIKLMKNREPGLIESAA 329 (474)
T ss_dssp CCSEEEEEEEEEEGGGEEEEEEEES
T ss_pred CCCccEEEEEEEcCCCCEEEEEEeC
Confidence 98777 899886 56699999994
|
| >2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=5.3e-08 Score=122.99 Aligned_cols=195 Identities=17% Similarity=0.205 Sum_probs=97.4
Q ss_pred cceeeccccCCCcH--HHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCccccccc
Q psy10158 100 VDCLISFHSKGFPL--EKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVE 174 (1266)
Q Consensus 100 cD~LIsFfS~GfPL--~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e 174 (1266)
+|++++-| ||-- ....+.++..+ ||+-++.....+++||..+.++|+++|||+|++. .+.... +
T Consensus 94 iD~V~pg~--g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~e---------e 162 (1165)
T 2qf7_A 94 ADAIHPGY--GLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMA---------E 162 (1165)
T ss_dssp CSEEECCS--STTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC---------------------
T ss_pred CCEEEECC--CchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHH---------H
Confidence 67788765 3321 23455666555 4667999999999999999999999999999987 343210 1
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-------cCcceEEeeccC
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-------KSGSFIYEDFMP 247 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-------~~gSyIYEEFI~ 247 (1266)
..+++. .+..|+|+||..|. .|.|++ +.+....-...+. ... .+..+|.||||+
T Consensus 163 a~~~a~----~igyPvVVKp~~g~-----------GG~Gv~-iv~s~eEL~~a~~---~~~~~a~~~fg~~~vlVEefI~ 223 (1165)
T 2qf7_A 163 VAKMAA----AIGYPVMLKASWGG-----------GGRGMR-VIRSEADLAKEVT---EAKREAMAAFGKDEVYLEKLVE 223 (1165)
T ss_dssp ----------------------------------------------------------------------------CCCS
T ss_pred HHHHHH----hcCCCEEEEeCCCC-----------CCCCEE-EECCHHHHHHHHH---HHHHHHHhhcCCCcEEEEEecc
Confidence 112221 24589999999986 366764 4443211111111 111 146799999997
Q ss_pred CCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCce-eeEe-eCCHHH----HHHHHHHHHHhCCc-cceeeEE
Q psy10158 248 TDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEI-RYPV-ILSNAE----KLISRKVCLAFKQT-VCGFDLL 317 (1266)
Q Consensus 248 t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV-~LT~eE----K~IA~kaakAFGq~-VCGfDLL 317 (1266)
. |..+.|.++++ .+++...|.. .+.|+ |++-. ..|. .|+++. .++|.++++++|.. +++||++
T Consensus 224 g-g~EisV~vl~D~~G~vv~l~~r~~-----s~~r~-~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~ 296 (1165)
T 2qf7_A 224 R-ARHVESQILGDTHGNVVHLFERDC-----SVQRR-NQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYL 296 (1165)
T ss_dssp S-EEEEEEEEEECTTSCEEEEEEEEE-----EEEET-TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred C-CcEEEEEEEEcCCCcEEEEEeecc-----cceec-ccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEE
Confidence 4 67888888875 3677655533 13332 22211 2233 477654 56899999999986 6789999
Q ss_pred ee-C-CCeEEEeecCc
Q psy10158 318 RA-N-GKSFVCDVNGF 331 (1266)
Q Consensus 318 Rs-~-ggsyVcDVNGw 331 (1266)
.. . |++||+|||--
T Consensus 297 vd~~dg~~~~iEiNpR 312 (1165)
T 2qf7_A 297 MDADTGKFYFIEVNPR 312 (1165)
T ss_dssp EETTTTEEEEEEEECS
T ss_pred EECCCCCEEEEEEEcC
Confidence 88 4 67999999963
|
| >3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} | Back alignment and structure |
|---|
Probab=98.59 E-value=9.3e-08 Score=121.38 Aligned_cols=195 Identities=15% Similarity=0.203 Sum_probs=94.2
Q ss_pred ccceeeccccCCCcH--HHHHHHHhhcCC-ccccCccchhhhhHHHHHHHHHHhcCCCCCCe-EEeccCCCCCccccccc
Q psy10158 99 IVDCLISFHSKGFPL--EKAIKYANLRKP-FVINNLNMQYDIQDRRKVYALLEKEGIEIPRY-AVLDRESPDPVKHELVE 174 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL--~KAi~Y~klrkp-~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~t-v~~~rd~~~~~~~~l~e 174 (1266)
.+|++++-| ||-- ....+.++..+. |+-++.....++.||..+.++|+++|||+|.. ..+... . +
T Consensus 103 ~iDaI~pg~--g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~~~v~s~-e--------e 171 (1236)
T 3va7_A 103 GAQAIIPGY--GFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGSGLIKDA-K--------E 171 (1236)
T ss_dssp TCSEEECCS--SGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC-------------------
T ss_pred CCCEEEECC--ccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCeeEecCCH-H--------H
Confidence 389999977 5432 344556666554 44589999999999999999999999999884 333221 0 1
Q ss_pred cCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccc-------cCcceEEeeccC
Q psy10158 175 SEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVR-------KSGSFIYEDFMP 247 (1266)
Q Consensus 175 ~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr-------~~gSyIYEEFI~ 247 (1266)
....+. .+..|+|+||..|. .|.|++ +.+....-...+. .+. .++.+|.||||+
T Consensus 172 a~~~a~----~iGyPvVVKP~~Gg-----------GGkGV~-iv~s~eEL~~a~~---~~~~~a~~~~~~~~vlVEeyI~ 232 (1236)
T 3va7_A 172 AKEVAK----KLEYPVMVKSTAGG-----------GGIGLQ-KVDSEDDIERVFE---TVQHQGKSYFGDAGVFMERFVN 232 (1236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH----HcCCCEEEEeCCCC-----------CCCCEE-EECCHHHHHHHHH---HHHHHHHhccCCCcEEEeeccC
Confidence 112222 24589999999987 366774 4443221111111 111 256799999997
Q ss_pred CCCceEEEEEECC---ceeEEeeccCCCCCCceeecCCCCce-eeEe-eCCHHH----HHHHHHHHHHhCCc-cceeeEE
Q psy10158 248 TDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEI-RYPV-ILSNAE----KLISRKVCLAFKQT-VCGFDLL 317 (1266)
Q Consensus 248 t~GtDVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV-~LT~eE----K~IA~kaakAFGq~-VCGfDLL 317 (1266)
- +..+-|.++++ .+++.-.|..- +.+. |+|-+ -.|. .|+++. .++|.++++++|.. +++||++
T Consensus 233 G-~rEisV~vl~Dg~g~vv~l~~rd~s-----~qr~-~~k~~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfi 305 (1236)
T 3va7_A 233 N-ARHVEIQMMGDGFGKAIAIGERDCS-----LQRR-NQKVIEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFI 305 (1236)
T ss_dssp C-CEEEEEEEEEESSSCEEEEEEEEEE-----EEET-TEEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred C-CeEEEEEEEecCCceEEEEeeeeee-----eeec-CcceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEE
Confidence 5 47888888864 45665555321 2221 12211 1243 377654 46789999999995 8999999
Q ss_pred eeC--CCeEEEeecC
Q psy10158 318 RAN--GKSFVCDVNG 330 (1266)
Q Consensus 318 Rs~--ggsyVcDVNG 330 (1266)
... |++||+|||-
T Consensus 306 vd~d~g~~y~iEINp 320 (1236)
T 3va7_A 306 YDEQRDEFYFLEVNA 320 (1236)
T ss_dssp EETTTTEEEEEEEEC
T ss_pred EECCCCcEEEEEEEC
Confidence 884 7999999995
|
| >3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=2e-07 Score=117.67 Aligned_cols=201 Identities=15% Similarity=0.124 Sum_probs=119.6
Q ss_pred ccceeeccccCCCcHHHHHHHHhhcC-CccccCccchhhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCcccccccc
Q psy10158 99 IVDCLISFHSKGFPLEKAIKYANLRK-PFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVES 175 (1266)
Q Consensus 99 ~cD~LIsFfS~GfPL~KAi~Y~klrk-p~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e~ 175 (1266)
.+|++++-|+.-.-.....+.++..+ ||+-++.....+++||....++|+++|||+|++. .+..... .
T Consensus 77 ~~DaI~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~ee---------a 147 (1150)
T 3hbl_A 77 NVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYEL---------A 147 (1150)
T ss_dssp TCSEEECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSST---------T
T ss_pred CCCEEEECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHH---------H
Confidence 47888886532111134455666666 4555999999999999999999999999999987 3432110 1
Q ss_pred CCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCc-ccc---cCcceEEeeccCCCCc
Q psy10158 176 EDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-RVR---KSGSFIYEDFMPTDGT 251 (1266)
Q Consensus 176 ~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s-~vr---~~gSyIYEEFI~t~Gt 251 (1266)
.... ..+..|+|+||..|. .|.|++ +.+....-...|..-. ..+ .++.+|.||||+- ..
T Consensus 148 ~~~a----~~iGyPvVVKP~~Gg-----------Gg~Gv~-vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G-~r 210 (1150)
T 3hbl_A 148 KEFA----EEAGFPLMIKATSGG-----------GGKGMR-IVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDN-PK 210 (1150)
T ss_dssp TTTG----GGTCSSEEEECCC------------------C-EECCSSSCTHHHHSSSSSCC------CBEEECCCSS-CE
T ss_pred HHHH----HHcCCCEEEEeCCCC-----------CCCCEE-EECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCC-Cc
Confidence 1111 123489999999986 355663 4332211111111000 000 1678999999963 26
Q ss_pred eEEEEEECC---ceeEEeeccCCCCCCceeecCCCCce-eeEe-eCCHHH----HHHHHHHHHHhCCc-cceeeEEeeCC
Q psy10158 252 DVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEI-RYPV-ILSNAE----KLISRKVCLAFKQT-VCGFDLLRANG 321 (1266)
Q Consensus 252 DVKVYtVGp---~~vhAe~RKSPvvDG~VRRN~hgKEi-RypV-~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs~g 321 (1266)
.+-|-++|. .++|.-.|... +.|+ |++-+ ..|. .|+++. .++|.++++++|.. ++.||++...+
T Consensus 211 eieV~vl~d~~G~vv~l~er~~s-----~qr~-~~k~~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd~d 284 (1150)
T 3hbl_A 211 HIEVQVIGDEHGNIVHLFERDCS-----VQRR-HQKVVEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGD 284 (1150)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEE-----EESS-SCEEEEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT
T ss_pred EEEEEEEEeCCCCEEEEEeeccc-----eecc-CceeEEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEECC
Confidence 777777754 56777666442 2222 22211 1233 466643 46889999999964 56699999888
Q ss_pred CeEEEeecCc
Q psy10158 322 KSFVCDVNGF 331 (1266)
Q Consensus 322 gsyVcDVNGw 331 (1266)
++|++|||-=
T Consensus 285 ~~y~iEINpR 294 (1150)
T 3hbl_A 285 EFFFIEVNPR 294 (1150)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 9999999963
|
| >3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=5.3e-06 Score=94.28 Aligned_cols=62 Identities=24% Similarity=0.332 Sum_probs=51.6
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhccc--c-cccceEEecCchhHHHHHHHHHHHhhccc
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHST--F-RHDLKIYASDEGRVQMTAAAFAKGLLALE 591 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst--~-rhDlKIYSSdEgRVq~TAaaFAkglL~lE 591 (1266)
.|+||..|+.|..+||+.||..|-. .|||- .. | ..++.|+||+-.|+++||++|+.||.--.
T Consensus 44 ~g~LT~~G~~q~~~lG~~lr~rY~~-----~~ll~--~~~~~~~~~v~vrst~~~Rt~~SA~~fl~Gl~P~~ 108 (398)
T 3ntl_A 44 GGQLTTKGGVLEVYMGHYMREWLAQ-----QGMVK--TGECPAADSVYAYANSLQRTVATAQFFITGAFPGC 108 (398)
T ss_dssp TTSBCHHHHHHHHHHHHHHHHHHHH-----TTSSC--TTSCCCTTSEEEEECSSHHHHHHHHHHHHHHSTTS
T ss_pred ccccchHHHHHHHHHHHHHHHHHhh-----cCCCc--cccCCCcCeEEEEECCchHHHHHHHHHHHHhCCCC
Confidence 3899999999999999999988821 25652 32 3 36999999999999999999999999743
|
| >2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii} | Back alignment and structure |
|---|
Probab=98.48 E-value=5.9e-07 Score=102.56 Aligned_cols=59 Identities=31% Similarity=0.513 Sum_probs=50.1
Q ss_pred Ccc-Ch-------hHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccCC
Q psy10158 524 GEL-TP-------AGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGE 593 (1266)
Q Consensus 524 GEl-Th-------aGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEge 593 (1266)
|+| |. .|+.|..+||+.||..|+ +||. . ...+.|+||+-.||.+||++|+.||+.....
T Consensus 119 g~LlT~~~~~~~~~G~~q~~~lG~~lr~rY~-------~ll~--~--~~~v~vrST~~~Rti~SA~~fl~Glfp~~~~ 185 (458)
T 2gfi_A 119 EKETSPKNSDSIYAGTTDAMKHGIAFRTKYG-------ELFD--T--NDTLPVFTSNSGRVYQTSQYFARGFMGDDFS 185 (458)
T ss_dssp TSBCCTTTCCCTTCHHHHHHHHHHHHHHHHG-------GGCC--T--TSCEEEEEESBHHHHHHHHHHHHHHHGGGCS
T ss_pred hhhcCCccCCCCCccHHHHHHHHHHHHHHhH-------HhcC--c--CCceEEEecCCchHHHHHHHHHHhccCCCcc
Confidence 555 99 999999999999998885 3542 2 4679999999999999999999999986544
|
| >1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=5.3e-06 Score=93.94 Aligned_cols=78 Identities=28% Similarity=0.323 Sum_probs=58.8
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccC-------CcC
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEG-------ELT 595 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEg-------eLt 595 (1266)
.|+||..|+.|..+||+.||..||. ||. . +.+.|+||+-.||.+||++|+.||....+ .+.
T Consensus 101 ~G~LT~~G~~q~~~lG~~lr~rY~~-------ll~--~---~~v~vrST~~~Rti~Sa~~fl~Gl~p~~~~~~~~~~~~~ 168 (442)
T 1qwo_A 101 ADDLTPFGEQQLVNSGIKFYQRYKA-------LAR--S---VVPFIRASGSDRVIASGEKFIEGFQQAKLADPGATNRAA 168 (442)
T ss_dssp SSSBCHHHHHHHHHHHHHHHHHTHH-------HHT--T---CCCEEEEESCHHHHHHHHHHHHHHHHHHHTCTTCCCCCC
T ss_pred cccchHHHHHHHHHHHHHHHHHHHH-------Hhc--c---CceEEEeCCccHHHHHHHHHHHHhcCCcccccccccccC
Confidence 5799999999999999999988863 553 2 46899999999999999999999997542 245
Q ss_pred ceeeeeecc-cccCCCCC
Q psy10158 596 PILVQMVKS-ANTNGLLD 612 (1266)
Q Consensus 596 PIlVslVk~-~~~~~LLD 612 (1266)
|+++..+.. ...+.+|.
T Consensus 169 p~~~~~i~e~~~~~~ll~ 186 (442)
T 1qwo_A 169 PAISVIIPESETFNNTLD 186 (442)
T ss_dssp CCEEEEECCCTTSCCTTS
T ss_pred ccceEEecCCCCCCCcCC
Confidence 665433322 12345554
|
| >1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=5.5e-05 Score=86.77 Aligned_cols=58 Identities=26% Similarity=0.377 Sum_probs=50.9
Q ss_pred CCccCh----hHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhccc
Q psy10158 523 GGELTP----AGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALE 591 (1266)
Q Consensus 523 GGElTh----aGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lE 591 (1266)
+|+||. .|+.|..+||+.||..||. ||. . ...+.|+||+-.||.+||++|+.||+..+
T Consensus 111 ~g~LT~~~~~~G~~q~~~lG~~lr~rY~~-------ll~--~--~~~v~vrST~~~Rti~SA~~fl~Glf~~~ 172 (460)
T 1qfx_A 111 YNAETTSGPYAGLLDAYNHGNDYKARYGH-------LWN--G--ETVVPFFSSGYGRVIETARKFGEGFFGYN 172 (460)
T ss_dssp TTSBCCSSTTCHHHHHHHHHHHHHHHHGG-------GCC--S--SSCEEEEEESBHHHHHHHHHHHHHHHGGG
T ss_pred cchhccCCcCCcHHHHHHHHHHHHHHhHH-------HhC--C--CCceEEEECCCcHHHHHHHHHHHHhcCCc
Confidence 699999 9999999999999988863 542 2 56799999999999999999999999753
|
| >3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00011 Score=84.50 Aligned_cols=58 Identities=26% Similarity=0.291 Sum_probs=49.7
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccC
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEG 592 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEg 592 (1266)
.|+||+.|+.|+.+||+.||..||. |+. . .++.++||+..||.+||++|+.||+..++
T Consensus 102 ~g~LT~~G~~~~~~lG~~~r~rY~~-------l~~--~---~~~~~rst~~~Rt~~Sa~~f~~Gl~~~~~ 159 (444)
T 3k4q_A 102 ADDLTPFGEQELVNSGIKFYQRYES-------LTR--N---IVPFIRSSGSSRVIASGKKFIEGFQSTKL 159 (444)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHTHH-------HHT--T---CCCEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHhHH-------hcc--C---CceEEEeCCccHHHHHHHHHHHhcCCCcc
Confidence 4699999999999999999988873 442 1 25789999999999999999999998653
|
| >2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9 | Back alignment and structure |
|---|
Probab=98.19 E-value=5.6e-06 Score=91.71 Aligned_cols=164 Identities=13% Similarity=0.059 Sum_probs=86.8
Q ss_pred CCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceE
Q psy10158 124 KPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIY 203 (1266)
Q Consensus 124 kp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~ 203 (1266)
+..+.-+..+.....||..-.+.|+++|||+|++.. . . |. .+..|+|+||..|.+
T Consensus 83 ~~p~~p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~~---~-e-----------e~------~i~~PviVKp~~g~g---- 137 (320)
T 2pbz_A 83 KARFFGNRRFLKWETTFELQDKALEGAGIPRVEVVE---P-E-----------DA------KPDELYFVRIEGPRG---- 137 (320)
T ss_dssp CSCCBSCSSGGGGGSCHHHHHHHHHHHTCCBCCBCC---S-C-----------CC------CSSCCEEEECC--------
T ss_pred CCCcCCCHHHHHHHHhHHHHHHHHHHCCcCCCCeeC---H-h-----------Hc------CcCCcEEEEECCCCC----
Confidence 334555566677788888888999999999999771 1 1 11 256999999999973
Q ss_pred EEeccCCCCchhhhhcccCCccccccCCccccc-CcceEEeeccCC-CCceEEEEEE--CCceeEEeeccCCCCCCceee
Q psy10158 204 IYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRK-SGSFIYEDFMPT-DGTDVKVYTV--GPDYAHAEARKSPALDGKVER 279 (1266)
Q Consensus 204 IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~-~gSyIYEEFI~t-~GtDVKVYtV--Gp~~vhAe~RKSPvvDG~VRR 279 (1266)
|.|+. +.+ + .++.. .+.. ++.+|.||||+. .......|-+ |.-.+-...++--..||.++-
T Consensus 138 -------gkG~~-~v~---~--eel~~--~~~~~~~~~IiEEfI~g~~~~~~~f~~~~~g~~e~~~~~~r~e~~~g~~~~ 202 (320)
T 2pbz_A 138 -------GSGHF-IVE---G--SELEE--RLSTLEEPYRVERFIPGVYLYVHFFYSPILERLELLGVDERVLIADGNARW 202 (320)
T ss_dssp -------------------C--EECSC--CCC----CCEEEECCCSCEEEEEEEEETTTTEEEEEEEEEEEETTCSSSSS
T ss_pred -------CCCEE-EEC---h--HHHHH--HHHhcCCCEEEEeeeceEecceeEEeccccCceeEEEecceEEEECCeeec
Confidence 66764 433 3 33322 1110 268999999993 2111111111 100011111111114665543
Q ss_pred cCCCCceee------EeeCC----HHHHHHHHHHHHHhC-------CccceeeEEeeCCCeEEEeecC
Q psy10158 280 DSEGKEIRY------PVILS----NAEKLISRKVCLAFK-------QTVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 280 N~hgKEiRy------pV~LT----~eEK~IA~kaakAFG-------q~VCGfDLLRs~ggsyVcDVNG 330 (1266)
. .....| |..++ ++=.++|.+++.+++ ..+.++| +..+|+.||+|||.
T Consensus 203 p--~~~~~~~~~G~~P~~~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE-~~~dg~~~v~EIap 267 (320)
T 2pbz_A 203 P--VKPLPYTIVGNRAIALRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH-FAYDGSFKAIGIAS 267 (320)
T ss_dssp C--CSCCCCCEEEEEECEECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE-EECSSSCEEEEEES
T ss_pred c--cCCCceeeecCCCCccCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE-EcCCCcEEEEEecC
Confidence 1 101111 55554 455678999999983 3466888 65578899999985
|
| >2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0001 Score=82.78 Aligned_cols=174 Identities=15% Similarity=0.103 Sum_probs=90.5
Q ss_pred hcCCccccCccchhhhhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcc
Q psy10158 122 LRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHN 201 (1266)
Q Consensus 122 lrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHN 201 (1266)
..+..+.-+..+-.+..||....+.|+++|||+|++ +.+. ++. ..|+|+||..+.
T Consensus 107 ~~g~~v~g~~~a~~~e~~k~~~k~~l~~~GIptp~~-~~~~-------------~e~--------~~PvVVK~~~~a--- 161 (361)
T 2r7k_A 107 SFLVPMFGNRRILRWESERSLEGKLLREAGLRVPKK-YESP-------------EDI--------DGTVIVKFPGAR--- 161 (361)
T ss_dssp TCCSCBBSCGGGGGTTTCHHHHHHHHHHTTCCCCCE-ESSG-------------GGC--------CSCEEEECSCCC---
T ss_pred HcCCCcCCCHHHHHHhhhHHHHHHHHHHcCcCCCCE-eCCH-------------HHc--------CCCEEEeeCCCC---
Confidence 334334334444556677888889999999999976 2211 111 279999999987
Q ss_pred eEEEeccCCCCchhhhhcccCCccccccC---Cccc--ccCcceEEeeccCC-CCceEEEEEE-CCc-eeEEeecc--CC
Q psy10158 202 IYIYYPTSAGGGSQRLFRKIGSRSSVYSP---ESRV--RKSGSFIYEDFMPT-DGTDVKVYTV-GPD-YAHAEARK--SP 271 (1266)
Q Consensus 202 I~IYyp~s~GgGv~~LfrKignkSS~y~p---~s~v--r~~gSyIYEEFI~t-~GtDVKVYtV-Gp~-~vhAe~RK--SP 271 (1266)
.|.|+. +.+........+.- ...+ .++..+|.||||.. .......|-+ +++ .+-.+.++ +.
T Consensus 162 --------~GkGv~-v~~s~ee~~~a~~~~~~~~~~~~~~~~~viIEEfl~G~e~s~~~f~~~~~~~~e~~~id~r~~~~ 232 (361)
T 2r7k_A 162 --------GGRGYF-IASSTEEFYKKAEDLKKRGILTDEDIANAHIEEYVVGTNFCIHYFYSPLKDEVELLGMDKRYESN 232 (361)
T ss_dssp --------C---EE-EESSHHHHHHHHHHHHHTTSCCHHHHHHCEEEECCCSEEEEEEEEEETTTTEEEEEEEEEEEEEE
T ss_pred --------CCCCEE-EECCHHHHHHHHHHHHhccccccCCCCeEEEEeccceEEeeEEEEecccCCeeEEEEecceEEee
Confidence 377774 44422111101100 0000 11256999999982 1111112221 110 11111111 11
Q ss_pred CCCCcee----ec-CCCCceee------EeeCC----HHHHHHHHHHHHHhC-------CccceeeEEee-CCCeEEEee
Q psy10158 272 ALDGKVE----RD-SEGKEIRY------PVILS----NAEKLISRKVCLAFK-------QTVCGFDLLRA-NGKSFVCDV 328 (1266)
Q Consensus 272 vvDG~VR----RN-~hgKEiRy------pV~LT----~eEK~IA~kaakAFG-------q~VCGfDLLRs-~ggsyVcDV 328 (1266)
.||.++ .. ..+.+..+ |..|+ ++=.++|.+++.++| ..+.++++.-. +|+.||+||
T Consensus 233 -~dgi~~~~~~~~~~~~~~p~~v~~G~~Pa~l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~dg~i~V~EI 311 (361)
T 2r7k_A 233 -IDGLVRIPAKDQLEMNINPSYVITGNIPVVIRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVVFEM 311 (361)
T ss_dssp -HHHHTTSCHHHHHTCCCCCCEEEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEEEEEE
T ss_pred -cccceecchhhhhcccCCCceEEecCcCCcCCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcCCCCEEEEEE
Confidence 133322 00 01111122 66665 455678899999984 56778999776 467999999
Q ss_pred cC
Q psy10158 329 NG 330 (1266)
Q Consensus 329 NG 330 (1266)
|.
T Consensus 312 ap 313 (361)
T 2r7k_A 312 SA 313 (361)
T ss_dssp ES
T ss_pred cC
Confidence 85
|
| >2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.41 E-value=9.9e-06 Score=73.12 Aligned_cols=96 Identities=13% Similarity=0.083 Sum_probs=56.6
Q ss_pred hhhhHHHHHHHHHHhcCCCCCCeE--EeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCC
Q psy10158 135 YDIQDRRKVYALLEKEGIEIPRYA--VLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGG 212 (1266)
Q Consensus 135 ~ilrDRr~vlqiL~~~gIp~P~tv--~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~Gg 212 (1266)
.+++||..+.++|+++|||+|++. .+... . ++ .+.+ ..+..|+|+||.+|. .|.
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~----~--~~---~~~~----~~~~~P~vvKp~~~~-----------~~~ 59 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDA----E--EA---VRIA----REIGYPVMIKASAGG-----------GGK 59 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSH----H--HH---HHHH----HHHCSSEEEEETTSC-----------CTT
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCH----H--HH---HHHH----HhcCCCEEEEECCCC-----------CCc
Confidence 456888999999999999999986 44321 0 01 0111 123589999999985 355
Q ss_pred chhhhhcccCCccccccCCccc------c-cCcceEEeeccCCCCceEEEEEEC
Q psy10158 213 GSQRLFRKIGSRSSVYSPESRV------R-KSGSFIYEDFMPTDGTDVKVYTVG 259 (1266)
Q Consensus 213 Gv~~LfrKignkSS~y~p~s~v------r-~~gSyIYEEFI~t~GtDVKVYtVG 259 (1266)
|+. +.+ +....-..-..+ . .+..+|.||||+- ..++.|-+||
T Consensus 60 gv~-~v~---~~~el~~~~~~~~~~~~~~~~~~~~lvee~i~g-~~E~~v~v~g 108 (108)
T 2cqy_A 60 GMR-IAW---DDEETRDGFRLSSQEAASSFGDDRLLIEKFIDN-PRHISGPSSG 108 (108)
T ss_dssp TCE-EES---SHHHHHHHHHHHHHHHHHHTSSCCEEEEECCSS-SSCCCSCCCC
T ss_pred cEE-EeC---CHHHHHHHHHHHHHHHHhhcCCCcEEEeeccCC-CcEEEEEecC
Confidence 553 322 221110000011 0 1467999999973 2577776665
|
| >1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.00096 Score=69.68 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhh
Q psy10158 137 IQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQR 216 (1266)
Q Consensus 137 lrDRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~ 216 (1266)
..||..+.++|+++|||+|++.++.... +..+ .. ..|..|+|+||.++. | ..++.|||+.
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~~~~~~~~------ea~~---~a----~~lg~PvvvKp~~~~-----~-~~r~~~gGv~- 78 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEEKLAKTLD------EALE---YA----KEIGYPVVLKLMSPQ-----I-LHKSDAKVVM- 78 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCCEEESSHH------HHHH---HH----HHHCSSEEEEEECTT-----C-CCHHHHTCEE-
T ss_pred CCCHHHHHHHHHHcCcCCCCeEEeCCHH------HHHH---HH----HHhCCCEEEEEccCC-----C-CcCCccCCEE-
Confidence 4689999999999999999999885311 0100 00 123489999999982 0 1122466764
Q ss_pred hhcccCCccccccCCccc-c---------cCcceEEeeccCCCCceEEEEEECCc
Q psy10158 217 LFRKIGSRSSVYSPESRV-R---------KSGSFIYEDFMPTDGTDVKVYTVGPD 261 (1266)
Q Consensus 217 LfrKignkSS~y~p~s~v-r---------~~gSyIYEEFI~t~GtDVKVYtVGp~ 261 (1266)
+ .+.+....-..-..+ . ....+|.|||++ .|..+-|-++++.
T Consensus 79 ~--~v~~~~el~~a~~~~~~~~~~~~~~~~~~~vlVEe~i~-~g~E~~v~v~~d~ 130 (238)
T 1wr2_A 79 L--NIKNEEELKKKWEEIHENAKKYRPDAEILGVLVAPMLK-PGREVIIGVTEDP 130 (238)
T ss_dssp E--EECSHHHHHHHHHHHHHHHHHHCTTCCCCEEEEEECCC-CCEEEEEEEEEET
T ss_pred E--eCCCHHHHHHHHHHHHHhhhhhCCCCccceEEEEECCC-CCeEEEEEEEeCC
Confidence 3 122222111100011 0 136799999998 4666666655543
|
| >3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0085 Score=61.61 Aligned_cols=48 Identities=29% Similarity=0.261 Sum_probs=37.8
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+..+++. . =-.||||+-.|++.||+++++.+
T Consensus 44 pLt~~G~~QA~~l~~~L~~~~~~~-----~----------~~~i~sSpl~Ra~qTA~~i~~~~ 91 (214)
T 3eoz_A 44 RLTKEGCKQADITGKKLKDILNNK-----K----------VSVIYHSDMIRAKETANIISKYF 91 (214)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTTC-----C----------EEEEEECSSHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHHHHhcccC-----C----------CCEEEECCcHHHHHHHHHHHHHC
Confidence 699999999999999999644321 1 12499999999999999998765
|
| >3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.019 Score=60.08 Aligned_cols=46 Identities=24% Similarity=0.299 Sum_probs=38.5
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++.. |+ .=| .||||+-.|++.||+++++++
T Consensus 35 pLT~~G~~QA~~l~~~L~~~---------~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 80 (257)
T 3gp3_A 35 DLTEQGNREARQAGQLLKEA---------GY-------TFD-IAYTSVLKRAIRTLWHVQDQM 80 (257)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc---------CC-------CCC-EEEeCChHHHHHHHHHHHHhc
Confidence 69999999999999999941 11 002 599999999999999999876
|
| >3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A | Back alignment and structure |
|---|
Probab=95.24 E-value=0.023 Score=59.29 Aligned_cols=46 Identities=22% Similarity=0.159 Sum_probs=38.6
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. |+ . =-.||||+-.|++.||+++++++
T Consensus 37 pLt~~G~~QA~~l~~~L~~~---------~~-------~-~d~i~sSpl~Ra~qTA~~i~~~~ 82 (258)
T 3kkk_A 37 PLSEKGEEEAIAAGKYLKEK---------NF-------K-FDVVYTSVLKRAICTAWNVLKTA 82 (258)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------C-CSEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc---------CC-------C-CCEEEECchHHHHHHHHHHHHhc
Confidence 79999999999999999951 11 0 11599999999999999999887
|
| >1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.022 Score=56.16 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=37.8
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+.. |+ .-| .||||+-.|++.||++++..+
T Consensus 22 pLt~~G~~qA~~l~~~l~~~---------~~-------~~~-~i~sSpl~Ra~qTA~~i~~~~ 67 (161)
T 1ujc_A 22 PLTTNGCDESRLMANWLKGQ---------KV-------EIE-RVLVSPFLRAEQTLEEVGDCL 67 (161)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------CCC-EEEECSSHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHHHhc---------CC-------CCC-EEEeCchHHHHHHHHHHHHhc
Confidence 59999999999999999951 11 112 599999999999999998764
|
| >1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.024 Score=59.01 Aligned_cols=46 Identities=24% Similarity=0.272 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. ++ .=| .||||+-.|++.||+++++++
T Consensus 28 pLt~~G~~QA~~l~~~l~~~---------~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 73 (249)
T 1e58_A 28 DLSEKGVSEAKAAGKLLKEE---------GY-------SFD-FAYTSVLKRAIHTLWNVLDEL 73 (249)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc---------CC-------CCc-EEEECCcHHHHHHHHHHHHhc
Confidence 49999999999999999841 11 012 599999999999999998876
|
| >1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.023 Score=58.77 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++. .++ .=| .||||+-.|++.||+++++++
T Consensus 26 pLt~~G~~QA~~l~~~L~~---------~~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 71 (240)
T 1qhf_A 26 KLSAKGQQEAARAGELLKE---------KKV-------YPD-VLYTSKLSRAIQTANIALEKA 71 (240)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------TTC-------CCS-EEEECSSHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-------CcC-EEEECCcHHHHHHHHHHHHhc
Confidence 5999999999999999984 111 012 599999999999999999875
|
| >4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.03 Score=59.39 Aligned_cols=46 Identities=28% Similarity=0.227 Sum_probs=38.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. ++ .=| .||||+-.|++.||+++++++
T Consensus 53 pLT~~G~~QA~~l~~~L~~~---------~~-------~~~-~i~sSpl~Ra~qTA~~i~~~~ 98 (268)
T 4eo9_A 53 GLTDKGRAEAVRSGELLAEH---------NL-------LPD-VLYTSLLRRAITTAHLALDTA 98 (268)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------CCS-EEEECSSHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHHhc---------CC-------CCC-EEEECCcHHHHHHHHHHHHhc
Confidence 79999999999999999941 11 112 699999999999999998875
|
| >2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.028 Score=55.99 Aligned_cols=46 Identities=26% Similarity=0.308 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.|+.. ++ .-| .||||+-.|++.||++++..+
T Consensus 32 pLt~~G~~qa~~l~~~l~~~---------~~-------~~~-~i~sSpl~Ra~qTA~~i~~~~ 77 (173)
T 2rfl_A 32 GLNEAGFAEAEIIADLAADR---------RY-------RPD-LILSSTAARCRQTTQAWQRAF 77 (173)
T ss_dssp CBCHHHHHHHHHHHHHHHHH---------TC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhC---------CC-------CCC-EEEECCHHHHHHHHHHHHHhc
Confidence 69999999999999999841 11 112 599999999999999999875
|
| >1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.029 Score=59.26 Aligned_cols=46 Identities=26% Similarity=0.372 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. |+ .=| .||||+-.|++.||+++++++
T Consensus 29 pLt~~G~~QA~~l~~~L~~~---------~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 74 (262)
T 1yfk_A 29 DLSPAGHEEAKRGGQALRDA---------GY-------EFD-ICFTSVQKRAIRTLWTVLDAI 74 (262)
T ss_dssp CBCHHHHHHHHHHHHHHHHH---------TC-------CCS-EEEECSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC---------CC-------CCC-EEEECCcHHHHHHHHHHHHhc
Confidence 49999999999999999841 11 112 599999999999999999875
|
| >3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.032 Score=59.24 Aligned_cols=46 Identities=33% Similarity=0.390 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. ++ .=| .||||+-.|++.||+++++++
T Consensus 46 pLt~~G~~QA~~l~~~L~~~---------~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 91 (267)
T 3d8h_A 46 SLSEQGVSEAIEAGRMLLEK---------GF-------KFD-VVYTSVLKRAIMTTWTVLKEL 91 (267)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhc---------CC-------CCC-EEEECChHHHHHHHHHHHHhc
Confidence 59999999999999999841 11 112 599999999999999998875
|
| >3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.028 Score=57.98 Aligned_cols=44 Identities=30% Similarity=0.334 Sum_probs=37.9
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+. ..+ -.||||+-.|++.||++++.++
T Consensus 39 pLt~~G~~qA~~l~~~l~~---------~~~----------~~i~sSpl~Ra~qTA~~i~~~~ 82 (237)
T 3r7a_A 39 PLVEKGVEVATNLGTGLKD---------IHF----------MNAYSSDSGRAIETANLVLKYS 82 (237)
T ss_dssp CBCHHHHHHHHHHHHHTTT---------SCE----------EEEEECSCHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHhcC---------CCC----------CEEEECCcHHHHHHHHHHHHhc
Confidence 7999999999999999982 111 2599999999999999999876
|
| >2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A | Back alignment and structure |
|---|
Probab=94.77 E-value=0.031 Score=59.18 Aligned_cols=46 Identities=24% Similarity=0.328 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++. .|+ .=| .||||+-.|++.||+++++++
T Consensus 29 pLt~~G~~QA~~l~~~L~~---------~~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 74 (267)
T 2hhj_A 29 KLNSEGMEEARNCGKQLKA---------LNF-------EFD-LVFTSVLNRSIHTAWLILEEL 74 (267)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------TTC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-------CcC-EEEECCcHHHHHHHHHHHHhc
Confidence 4999999999999999984 111 012 599999999999999999876
|
| >3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A | Back alignment and structure |
|---|
Probab=94.73 E-value=0.034 Score=58.50 Aligned_cols=46 Identities=28% Similarity=0.239 Sum_probs=38.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++.. ++ . =-.||||+-.|++.||+++++++
T Consensus 57 pLT~~G~~QA~~l~~~L~~~---------~~-------~-~d~v~sSpl~Ra~qTA~~i~~~~ 102 (264)
T 3mbk_A 57 PITVFGCMQARLVGEALLES---------NT-------V-IDHVYCSPSLRCVQTAHNILKGL 102 (264)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------C-CCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHc---------CC-------C-cCEEEECcHHHHHHHHHHHHHHh
Confidence 49999999999999999841 11 0 11599999999999999999876
|
| >3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A | Back alignment and structure |
|---|
Probab=94.73 E-value=0.031 Score=56.56 Aligned_cols=47 Identities=36% Similarity=0.360 Sum_probs=38.6
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
-.||..|+.||+.||+.|+.. |+ .=-.||||+-.|++.||+++++++
T Consensus 31 ~pLt~~G~~qA~~l~~~l~~~---------~~--------~~~~i~sSpl~Ra~qTA~~i~~~~ 77 (202)
T 3mxo_A 31 RTLTPLGREQAELTGLRLASL---------GL--------KFNKIVHSSMTRAIETTDIISRHL 77 (202)
T ss_dssp CCBCHHHHHHHHHHHHHHHTT---------CC--------CCSEEEEESSHHHHHHHHHHHHTS
T ss_pred CCcCHHHHHHHHHHHHHHHhc---------CC--------CCCEEEECChHHHHHHHHHHHHhC
Confidence 469999999999999999941 11 011599999999999999998865
|
| >1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1 | Back alignment and structure |
|---|
Probab=94.56 E-value=0.037 Score=56.35 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=38.3
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++.. |+ .=| .||||+-.|++.||+++++++
T Consensus 33 pLt~~G~~qA~~l~~~L~~~---------~~-------~~~-~i~sSpl~Ra~qTA~~i~~~~ 78 (211)
T 1fzt_A 33 ALSETGIKEAKLGGERLKSR---------GY-------KFD-IAFTSALQRAQKTCQIILEEV 78 (211)
T ss_dssp CBCHHHHHHHHHHHHHHHHH---------TC-------CCS-EEEEESSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhc---------CC-------CCC-EEEECCcHHHHHHHHHHHHhc
Confidence 59999999999999999941 11 012 599999999999999999876
|
| >3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.028 Score=59.45 Aligned_cols=44 Identities=25% Similarity=0.262 Sum_probs=37.6
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++. .. =-+||||+-.||+.||+++++++
T Consensus 30 pLt~~G~~QA~~l~~~l~~---------~~----------~~~i~sSpl~Ra~qTA~~i~~~~ 73 (265)
T 3e9c_A 30 PLSDTGHQQAAAAGRYLKD---------LH----------FTNVFVSNLQRAIQTAEIILGNN 73 (265)
T ss_dssp CCCHHHHHHHHHHHHHTTT---------CC----------CSEEEECSSHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHHhc---------CC----------CCEEEECCcHHHHHHHHHHHHhc
Confidence 5999999999999999983 11 11699999999999999999876
|
| >1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.027 Score=57.43 Aligned_cols=44 Identities=34% Similarity=0.472 Sum_probs=36.8
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.++. .. + | .||||+-.|++.||++++..+
T Consensus 27 pLt~~G~~qA~~~~~~l~~---------~~-------~--~-~i~sSpl~Ra~qTA~~i~~~~ 70 (207)
T 1h2e_A 27 PLTEKGRQDAMRLGKRLEA---------VE-------L--A-AIYTSTSGRALETAEIVRGGR 70 (207)
T ss_dssp CBCHHHHHHHHHHHHHTTT---------SC-------C--S-EEEECSSHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHcC---------CC-------C--C-EEEECccHHHHHHHHHHHhcC
Confidence 6999999999999999883 00 1 2 599999999999999998653
|
| >3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.045 Score=57.55 Aligned_cols=47 Identities=36% Similarity=0.454 Sum_probs=38.4
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
-.||..|+.||+.||+.|+.. ++ .=| .||||+-.|++.||+++++++
T Consensus 58 ~pLt~~G~~QA~~l~~~L~~~---------~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 104 (263)
T 3c7t_A 58 TPLTRLGWFQAQLVGEGMRMA---------GV-------SIK-HVYASPALRCVETAQGFLDGL 104 (263)
T ss_dssp CCBCHHHHHHHHHHHHHHHHT---------TC-------CCC-EEEECSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHC---------CC-------CCC-EEEECCcHHHHHHHHHHHHHc
Confidence 469999999999999999841 11 012 599999999999999998875
|
| >4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.049 Score=57.79 Aligned_cols=46 Identities=22% Similarity=0.165 Sum_probs=38.3
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+.. ++ . =-.||||+-.|++.||+++++++
T Consensus 53 pLT~~G~~QA~~l~~~L~~~---------~~-------~-~d~v~sSpl~Ra~qTA~~i~~~~ 98 (274)
T 4emb_A 53 KLSDKGIDEAVEAGLLLKQE---------GY-------S-FDIAFSSLLSRANDTLNIILREL 98 (274)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------C-CSEEEECSSHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhc---------CC-------C-CCEEEECChHHHHHHHHHHHHhc
Confidence 79999999999999999941 11 0 11599999999999999999876
|
| >3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A | Back alignment and structure |
|---|
Probab=94.25 E-value=0.045 Score=57.72 Aligned_cols=46 Identities=26% Similarity=0.302 Sum_probs=37.9
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++.. ++ + + | .||||+-.|++.||+++++++
T Consensus 66 pLt~~G~~QA~~l~~~L~~~---------~~---~--~--d-~i~sSpl~Ra~qTA~~i~~~~ 111 (273)
T 3d4i_A 66 PLSSCGIFQARLAGEALLDS---------GV---R--V--T-AVFASPALRCVQTAKHILEEL 111 (273)
T ss_dssp CBCHHHHHHHHHHHHHHHHH---------TC---C--E--E-EEEECSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhc---------CC---C--C--C-EEEECchHHHHHHHHHHHHHc
Confidence 59999999999999999841 11 0 0 1 599999999999999999875
|
| >3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.06 Score=54.51 Aligned_cols=45 Identities=24% Similarity=0.194 Sum_probs=37.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.|+.. |+ . --.||||+-.|++.||+++++.
T Consensus 24 pLt~~G~~qA~~~~~~L~~~---------~~-------~-~~~i~sSp~~Ra~qTa~~l~~~ 68 (172)
T 3f2i_A 24 ELTQEGKQKTEKVAYRLVKL---------GR-------Q-FDLIVTSPLIRARQTAEILLAS 68 (172)
T ss_dssp CBCHHHHHHHHHHHHHHHHT---------TC-------C-CSEEEECSSHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHHhc---------CC-------C-CCEEEECChHHHHHHHHHHHhc
Confidence 59999999999999999951 11 0 1169999999999999999987
|
| >3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A* | Back alignment and structure |
|---|
Probab=93.98 E-value=0.046 Score=57.77 Aligned_cols=51 Identities=27% Similarity=0.201 Sum_probs=38.3
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.++. .+ .++. -.+=-+||||+-.|++.||+++++++
T Consensus 31 pLT~~G~~QA~~l~~~L~~-------~~-~~~~----~~~~~~i~sSpl~Ra~qTA~~i~~~~ 81 (265)
T 3f3k_A 31 PLTPYGEGQMLRTGESVFR-------NN-QFLN----PDNITYIFTSPRLRARQTVDLVLKPL 81 (265)
T ss_dssp CCCHHHHHHHHHHHHHHHT-------C--CCSC----GGGEEEEEECSSHHHHHHHHHHTTTS
T ss_pred CCCHHHHHHHHHHHHHHHh-------cc-cccC----CCCCCEEEECCHHHHHHHHHHHHHhc
Confidence 6999999999999999983 01 1211 01123699999999999999997765
|
| >1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate mutase, SH3 domain binding, structural genom TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1 | Back alignment and structure |
|---|
Probab=93.97 E-value=0.061 Score=57.48 Aligned_cols=46 Identities=26% Similarity=0.201 Sum_probs=37.9
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.++. .|+ .=| .||||+-.|++.||++++..+
T Consensus 30 pLt~~G~~QA~~l~~~L~~---------~~~-------~~d-~i~sSpl~Ra~qTA~~i~~~~ 75 (265)
T 1rii_A 30 GLTDKGQAEAVRSGELIAE---------HDL-------LPD-VLYTSLLRRAITTAHLALDSA 75 (265)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------TTC-------CCS-EEEECSCHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-------CCC-EEEECCcHHHHHHHHHHHHHc
Confidence 4999999999999999984 111 112 599999999999999998875
|
| >3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.94 E-value=0.045 Score=58.21 Aligned_cols=44 Identities=20% Similarity=0.174 Sum_probs=37.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++.. .--.||||+-.|++.||++++.++
T Consensus 35 ~Lt~~G~~QA~~l~~~l~~~-------------------~~~~v~sSpl~Ra~qTA~~i~~~~ 78 (275)
T 3dcy_A 35 PLSETGFKQAAAAGIFLNNV-------------------KFTHAFSSDLMRTKQTMHGILERS 78 (275)
T ss_dssp CBCHHHHHHHHHHHHHTTTC-------------------CCSEEEECSSHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHhccC-------------------CCCEEEECChHHHHHHHHHHHHhc
Confidence 69999999999999998831 112699999999999999998876
|
| >2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=93.68 E-value=0.03 Score=58.22 Aligned_cols=46 Identities=24% Similarity=0.200 Sum_probs=37.7
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.-.||..|+.||+.||+.++.. . + | .||||+-.|++.||+++++.+
T Consensus 42 D~pLt~~G~~QA~~l~~~L~~~---------~-------~--d-~i~sSpl~Ra~qTA~~i~~~~ 87 (219)
T 2qni_A 42 EWGLSERGAERAREASRLPWAK---------A-------L--R-RIVSSAETKAIETAHMLAETS 87 (219)
T ss_dssp GCCBCHHHHHHHHHHHTSHHHH---------T-------C--C-EEEECSSHHHHHHHHHHTTTT
T ss_pred CCCcCHHHHHHHHHHHHHHhcC---------C-------C--C-EEEECCcHHHHHHHHHHHHhc
Confidence 4469999999999999988831 0 1 2 599999999999999998654
|
| >3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=93.22 E-value=0.095 Score=53.82 Aligned_cols=44 Identities=18% Similarity=0.080 Sum_probs=35.6
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
-.||..|+.||+.+|+.+. .+ .+ .||||+-.|++.||+++++++
T Consensus 28 ~pLt~~G~~QA~~~~~~l~--~~------~~------------~i~sSpl~Ra~qTA~~i~~~~ 71 (213)
T 3hjg_A 28 LKVKEAEQQQIAMAWKTKG--YD------VA------------GIISSPLSRCHDLAQILAEQQ 71 (213)
T ss_dssp CCCCHHHHHHHHHHHHHTT--CC------CS------------CEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcC--CC------CC------------EEEECChHHHHHHHHHHHhcc
Confidence 3699999999999998662 00 11 399999999999999998764
|
| >2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.089 Score=53.84 Aligned_cols=41 Identities=34% Similarity=0.351 Sum_probs=34.3
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaa 582 (1266)
.||..|+.||+.+|+.++. .+ +.-| .||||+-.|++.||++
T Consensus 36 pLt~~G~~qA~~l~~~l~~---------~~-------~~~~-~i~sSpl~Ra~qTA~~ 76 (208)
T 2a6p_A 36 ELTDTGRTQAELAGQLLGE---------LE-------LDDP-IVICSPRRRTLDTAKL 76 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHT---------TC-------CSSC-EEEECSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhc---------CC-------CCCC-EEEECCcHHHHHHHHH
Confidence 5999999999999999994 11 1113 6999999999999998
|
| >3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=92.64 E-value=0.097 Score=57.95 Aligned_cols=44 Identities=25% Similarity=0.256 Sum_probs=37.1
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.+|+.++.+ . + | .||||+=.|++.||+++++.+
T Consensus 207 pLt~~G~~qa~~~~~~l~~~---------~-------~--d-~i~sSp~~Ra~~Ta~~~~~~~ 250 (364)
T 3fjy_A 207 PITPKGAAMAFALNRELACF---------N-------P--T-RLATSPWLRCQETLQVLSWQT 250 (364)
T ss_dssp CBCHHHHHHHHHHHHHHGGG---------C-------E--E-EEEECSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccC---------C-------C--C-EEEEcChHHHHHHHHHHHHhc
Confidence 49999999999999999831 1 1 2 499999999999999998874
|
| >1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... | Back alignment and structure |
|---|
Probab=91.95 E-value=0.069 Score=53.46 Aligned_cols=36 Identities=33% Similarity=0.356 Sum_probs=32.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaa 582 (1266)
.||..|+.||+.+|+.++. + + ||||+-.|++.||++
T Consensus 26 pLt~~G~~qA~~l~~~l~~-----------~---------~--i~sSpl~Ra~qTA~~ 61 (177)
T 1v37_A 26 PLTAEGEAQARRLKGALPS-----------L---------P--AFSSDLLRARRTAEL 61 (177)
T ss_dssp CCCHHHHHHHHHHTTTSCS-----------C---------C--EEECSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhcC-----------C---------C--EEECCcHHHHHHHHH
Confidence 6999999999999987772 1 1 999999999999999
|
| >4hbz_A Putative phosphohistidine phosphatase, SIXA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, HP_PGM_LIKE; HET: PGE; 1.55A {Nakamurella multipartita} | Back alignment and structure |
|---|
Probab=90.27 E-value=0.27 Score=50.42 Aligned_cols=42 Identities=31% Similarity=0.274 Sum_probs=34.4
Q ss_pred cChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHH
Q psy10158 526 LTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584 (1266)
Q Consensus 526 lThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFA 584 (1266)
||..|+.||+.+|+.++.. ++ .-| .||+|.=.|++.||++++
T Consensus 41 Lt~~G~~~a~~~~~~l~~~---------~~-------~~d-~i~~Spa~Ra~qTa~~~~ 82 (186)
T 4hbz_A 41 LTPDGVRAATAAGQWLRGH---------LP-------AVD-VVVCSTAARTRQTLAATG 82 (186)
T ss_dssp BCHHHHHHHHHHHHHHHHH---------SC-------CCC-EEEEESSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhhHhhhc---------cc-------CCC-ccccCcchhHHHHHHhhc
Confidence 9999999999999999941 11 112 599999999999999874
|
| >2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* | Back alignment and structure |
|---|
Probab=88.97 E-value=0.29 Score=57.47 Aligned_cols=45 Identities=29% Similarity=0.415 Sum_probs=36.7
Q ss_pred cCC--ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHH
Q psy10158 522 WGG--ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583 (1266)
Q Consensus 522 WGG--ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaF 583 (1266)
++| .||..|+.||+.||+.++. .++ ....||||+-.|++.||+++
T Consensus 265 ~~gD~pLt~~G~~qA~~l~~~L~~---------~~~--------~~~~v~sSpl~Ra~qTA~~i 311 (520)
T 2axn_A 265 IGGDSGLSSRGKKFASALSKFVEE---------QNL--------KDLRVWTSQLKSTIQTAEAL 311 (520)
T ss_dssp CSSCCCBCHHHHHHHHHHHHHHHH---------HCC--------SCCEEEECSSHHHHHHHHTT
T ss_pred cCCCcccCHHHHHHHHHHHHHHHh---------cCC--------CCCeEEeCCcHHHHHHHHHh
Confidence 345 5999999999999999984 111 12469999999999999987
|
| >2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A* | Back alignment and structure |
|---|
Probab=88.90 E-value=0.39 Score=57.96 Aligned_cols=114 Identities=15% Similarity=0.123 Sum_probs=69.1
Q ss_pred HHHhhcCCccccCccchhhhhHHHHHHHHHHhcCCC-CC---CeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEe
Q psy10158 118 KYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIE-IP---RYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEK 193 (1266)
Q Consensus 118 ~Y~klrkp~~lNdl~~Q~ilrDRr~vlqiL~~~gIp-~P---~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeK 193 (1266)
+++...+..++|.+..+- +.+|...--+.+.. | +| .|.+.. ..+ +. ...+|.|
T Consensus 477 ~~l~~~~v~iieP~~~~l-lsNKailalLw~l~--p~hp~LLpT~f~~-------------~~~-l~------~~~yV~K 533 (619)
T 2io8_A 477 DVLLRPEVLVFEPLWTVI-PGNKAILPILWSLF--PHHRYLLDTDFTV-------------NDE-LV------KTGYAVK 533 (619)
T ss_dssp HHHTCTTCEEESCGGGGT-TTSTTHHHHHHHHS--TTCTTCCCEESSC-------------CHH-HH------HHCEEEE
T ss_pred HHHHhCCCEEECHHHHHH-hhhHHHHHHHHHhC--CCCCCCCCeeecC-------------Ccc-cc------cCCEEEc
Confidence 334556788889988854 66665433333322 2 33 444221 100 11 1349999
Q ss_pred cccc-cCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCCce-----EEEEEECCceeEEee
Q psy10158 194 PVSA-EDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTD-----VKVYTVGPDYAHAEA 267 (1266)
Q Consensus 194 pv~G-edHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtD-----VKVYtVGp~~vhAe~ 267 (1266)
|+.| +-.||.|+-+ . |.. +-... -.| .+..||||||++--..| |-+|+||++++.+..
T Consensus 534 Pi~gReG~nV~i~~~--~--~~~-~~~~~----~~y-------~~~~~IyQe~~~lp~~d~~~~~iG~f~vgg~~aG~~~ 597 (619)
T 2io8_A 534 PIAGRCGSNIDLVSH--H--EEV-LDKTS----GKF-------AEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCL 597 (619)
T ss_dssp ETTCCTTTTCEEECT--T--SCE-EEECC----CTT-------TTSCEEEEECCCCCEETTEEEEEEEEEETTEEEEEEE
T ss_pred cCCCCCCCCEEEEeC--C--Chh-Hhhcc----ccc-------cCCCeEEEEecCCCCcCCcceEEEEEEECCEEEEEEE
Confidence 9999 6566666532 1 110 11111 111 25779999999975677 999999999999999
Q ss_pred ccC
Q psy10158 268 RKS 270 (1266)
Q Consensus 268 RKS 270 (1266)
|.+
T Consensus 598 R~~ 600 (619)
T 2io8_A 598 RGD 600 (619)
T ss_dssp EEE
T ss_pred ecC
Confidence 997
|
| >3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A* | Back alignment and structure |
|---|
Probab=87.14 E-value=0.25 Score=54.76 Aligned_cols=21 Identities=38% Similarity=0.566 Sum_probs=18.3
Q ss_pred ceeeeceEEEEEcCCCCcccc
Q psy10158 383 MMELRCVVAVIRHGDRTPKQK 403 (1266)
Q Consensus 383 ~~eLr~VVaViRHgDRTPKQK 403 (1266)
..+|+-|+.|.|||||||..-
T Consensus 5 ~~~L~~v~v~~RHG~R~p~~~ 25 (342)
T 3it3_A 5 SSKLIFVSMITRHGDRAPFAN 25 (342)
T ss_dssp -CEEEEEEEEEECCCBCCSSC
T ss_pred ccEeeEEEEEEeCCCCCCccc
Confidence 368999999999999999853
|
| >1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A | Back alignment and structure |
|---|
Probab=85.68 E-value=0.43 Score=54.70 Aligned_cols=42 Identities=31% Similarity=0.462 Sum_probs=34.8
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaF 583 (1266)
.||..|+.||+.||+.++. .|+ +-..||||+-.|++.||+++
T Consensus 273 ~Lt~~G~~qA~~l~~~l~~---------~~~--------~~~~v~sSpl~Ra~qTA~~l 314 (469)
T 1bif_A 273 GLSPRGREFSKHLAQFISD---------QNI--------KDLKVFTSQMKRTIQTAEAL 314 (469)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------HTC--------TTCEEEECSSHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC--------CCCEEEECCcHHHHHHHHHh
Confidence 5999999999999999994 111 12369999999999999975
|
| >1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A | Back alignment and structure |
|---|
Probab=84.11 E-value=0.43 Score=51.70 Aligned_cols=20 Identities=50% Similarity=0.873 Sum_probs=17.9
Q ss_pred eeeceEEEEEcCCCCcccce
Q psy10158 385 ELRCVVAVIRHGDRTPKQKM 404 (1266)
Q Consensus 385 eLr~VVaViRHgDRTPKQKl 404 (1266)
+|+-|+.|.|||||||..++
T Consensus 2 ~L~~v~vl~RHG~R~P~~~~ 21 (354)
T 1nd6_A 2 ELKFVTLVFRHGDRSPIDTF 21 (354)
T ss_dssp EEEEEEEEEECCCBCCSCCC
T ss_pred eeEEEEEEecCCCCCCcccc
Confidence 68999999999999998753
|
| >3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* | Back alignment and structure |
|---|
Probab=81.97 E-value=0.67 Score=53.09 Aligned_cols=55 Identities=9% Similarity=0.235 Sum_probs=35.8
Q ss_pred cCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCccc-ccCcceEEeeccCC------CC--ceEEEEE
Q psy10158 187 NKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRV-RKSGSFIYEDFMPT------DG--TDVKVYT 257 (1266)
Q Consensus 187 ~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~v-r~~gSyIYEEFI~t------~G--tDVKVYt 257 (1266)
..++|+||..|. +|.|. .|+++... .. ..+ .....||.|+||.. +| -|||+||
T Consensus 147 ~~~wI~KP~~~s-----------rG~GI-~l~~~~~~----i~--~~~~~~~~~~VvQkYI~~PlLi~~~grKFDlR~Yv 208 (380)
T 3tig_A 147 GNVWIAKSSSGA-----------KGEGI-LISSDATE----LL--DFIDNQGQVHVIQKYLESPLLLEPGHRKFDIRSWV 208 (380)
T ss_dssp CCCEEEEESCC---------------CC-BCCSCSHH----HH--HHHHHHTSCEEEEECCSSBCCBTTTTBCEEEEEEE
T ss_pred CCeEEEeCCccC-----------CCCCE-EEeCCHHH----HH--HHHhccCCcEEEEecccCceeecCCCceeEEEEEE
Confidence 478999999997 69998 48875321 00 011 13578999999974 67 7999998
Q ss_pred EC
Q psy10158 258 VG 259 (1266)
Q Consensus 258 VG 259 (1266)
+-
T Consensus 209 lv 210 (380)
T 3tig_A 209 LV 210 (380)
T ss_dssp EE
T ss_pred EE
Confidence 83
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1266 | ||||
| d1dkla_ | 409 | c.60.1.2 (A:) Phytase (myo-inositol-hexakisphospha | 1e-07 | |
| d1nt4a_ | 391 | c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia c | 1e-06 | |
| d1nd6a_ | 342 | c.60.1.2 (A:) Prostatic acid phosphatase {Human (H | 8e-06 | |
| d1qwoa_ | 435 | c.60.1.2 (A:) Phytase (myo-inositol-hexakisphospha | 7e-05 | |
| d1i7na2 | 206 | d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus nor | 1e-04 | |
| d1ihpa_ | 438 | c.60.1.2 (A:) Phytase (myo-inositol-hexakisphospha | 1e-04 | |
| d1qfxa_ | 447 | c.60.1.2 (A:) Phytase (myo-inositol-hexakisphospha | 2e-04 |
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} Length = 409 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Escherichia coli [TaxId: 562]
Score = 53.5 bits (127), Expect = 1e-07
Identities = 47/369 (12%), Positives = 94/369 (25%), Gaps = 69/369 (18%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHD-LKIYASDEGRVQMTAAA 582
G LTP G LG R GLL + + I A + R + T A
Sbjct: 44 GWLTPRGGELIAYLGHYQRQRLV-----ADGLLAKKGCPQSGQVAIIADVDERTRKTGEA 98
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPED 642
FA GL I V ++ L N D
Sbjct: 99 FAAGLAPDCA----ITVHTQADTSSPDPLFNPLKTG-------------------VCQLD 135
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
V I + L+ ++ ++ K ES
Sbjct: 136 NANVTD------AILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKR--EKQDESC 187
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMA 762
L S+++ + +S + + + + + + +
Sbjct: 188 SLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNT-LL 246
Query: 763 DIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPG 822
+ Q Y + + ++ S+ PLL I+ L + + + L
Sbjct: 247 SLHNAQFYLLQRTPEVARSRA--TPLLDLIKTALTPHPPQKQAYGVTLPTSVL------- 297
Query: 823 RHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIM 882
++++ +L L L ++ + ++V
Sbjct: 298 ------FIAGHDTNLANLGGAL---ELNWTLPGQPDN-------------TPPGGELVFE 335
Query: 883 LYEDPTKDP 891
+ + +
Sbjct: 336 RWRRLSDNS 344
|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Glucose-1-phosphatase species: Escherichia coli [TaxId: 562]
Score = 49.6 bits (117), Expect = 1e-06
Identities = 45/370 (12%), Positives = 91/370 (24%), Gaps = 86/370 (23%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAA 582
G+LT G + +G R G+++ + + YA+ R TA
Sbjct: 47 GQLTTKGGVLEVYMGHYMREWLA-----EQGMVKSGECPPPYTVYAYANSLQRTVATAQF 101
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPED 642
F G D H + D TF P
Sbjct: 102 FITGAFP------------------------GCDIPVHHQE------KMGTMDPTFNPVI 131
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESW 702
D + + AM+ + +Q L ++ + + +
Sbjct: 132 TD-DSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNY----------KDSPACKEKQQC 180
Query: 703 ELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYL-NAKYM 761
L+ + + K + + D Q E K +
Sbjct: 181 SLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVL 240
Query: 762 ADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSP 821
+ + + + S ++ + PL+ I L + + +
Sbjct: 241 SKLKNGYQDSLFTSPEVARNVA--KPLVSYIDKALVTDRTSAPKIT-------------- 284
Query: 822 GRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVI 881
+ +S+I SLLT L + + ++V
Sbjct: 285 -------VLVGHDSNIASLLTAL---DFKPYQLHDQNERT------------PIGGKIVF 322
Query: 882 MLYEDPTKDP 891
+ D +
Sbjct: 323 QRWHDSKANR 332
|
| >d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Prostatic acid phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (111), Expect = 8e-06
Identities = 26/116 (22%), Positives = 38/116 (32%), Gaps = 18/116 (15%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAA 582
G+LT G Q ELG R Y L+ ++ + I ++D R M+A
Sbjct: 36 GQLTQLGMEQHYELGEYIRKRYRK---------FLNESYKHEQVYIRSTDVDRTLMSAMT 86
Query: 583 FAKGLLALEGELT--------PILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHD 630
L EG PI V V + L + + Q + L
Sbjct: 87 NLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQLLYLPFRNCPRFQELESETLKS 142
|
| >d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]} Length = 435 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Aspergillus fumigatus [TaxId: 5085]
Score = 44.5 bits (104), Expect = 7e-05
Identities = 28/154 (18%), Positives = 39/154 (25%), Gaps = 22/154 (14%)
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
+LTP G Q G F Y I AS RV +
Sbjct: 94 GADDLTPFGEQQLVNSGIKFYQRYK------------ALARSVVPFIRASGSDRVIASGE 141
Query: 582 AFAKGLLALEGEL--------TPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQ 633
F +G + I V + +S N LD+ +K +
Sbjct: 142 KFIEGFQQAKLADPGATNRAAPAISVIIPESETFNNTLDHGV-CTKFEASQLGDEV-AAN 199
Query: 634 RDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQC 667
F P+ R + D V C
Sbjct: 200 FTALFAPDIRARAEKHLPGVTLTDEDVVSLMDMC 233
|
| >d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Synapsin C-terminal domain domain: Synapsin II species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/233 (10%), Positives = 64/233 (27%), Gaps = 29/233 (12%)
Query: 129 NNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNK 188
N+L Y+ D+ V+A + + P + + + +
Sbjct: 1 NSLESIYNFCDKPWVFAQMVAIFKTLGGEKF-----PLIEQTYYPNHREMLTLPT----F 51
Query: 189 PFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPT 248
P V K + E F+
Sbjct: 52 PVVVKIGH--------------AHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDA 97
Query: 249 DGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAFK 308
D++V +G +Y G + ++ + + + + +
Sbjct: 98 K-YDIRVQKIGNNYKAYMRTSIS---GNWKTNTGSAMLEQIAMSDRYKLWVDACSEMFGG 153
Query: 309 QTVCGFDLLR-ANGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPTL 360
+C + +GK ++ +V S +D +++ ++++ ++ L
Sbjct: 154 LDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVED-RQLITDLVISKMNQLL 205
|
| >d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]} Length = 438 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Aspergillus ficuum [TaxId: 5058]
Score = 43.7 bits (102), Expect = 1e-04
Identities = 43/367 (11%), Positives = 100/367 (27%), Gaps = 74/367 (20%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
+LTP G + G F Y T I +S RV + F
Sbjct: 97 DDLTPFGEQELVNSGIKFYQRYE------------SLTRNIVPFIRSSGSSRVIASGKKF 144
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDR 643
+G + + ++ + D +
Sbjct: 145 IEGFQSTKL----------------------------KDPRAQPGQSSPKIDVVISEASS 176
Query: 644 DKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWE 703
+ +P C + + V+ ++ + +
Sbjct: 177 S--------------NNTLDPGTCTVFEDS----------ELADTVEANFTATFVPSIRQ 212
Query: 704 LMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMAD 763
+ S + Y D+ D D + + F E ++N Y+
Sbjct: 213 RLENDLSGVTLTDTEVTYLMDMCSF-DTISTSTVDTKLSPFCDLFTHDE--WINYDYLQS 269
Query: 764 IVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGR 823
+ + YG L +QG+ ++ A L + + + N ++
Sbjct: 270 LK--KYYGHGAGNPLGPTQGV--GYANELIARLTHSPVHDDTSSNH---TLDSSPATFPL 322
Query: 824 HVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIML 883
+ F+ ++ I S+L L T+ + + + + S + + S++ + +
Sbjct: 323 NSTLYADFSHDNGIISILFALGLYNGTKPLSTTTVENITQTDGFSSAWTVPFASRLYVEM 382
Query: 884 YEDPTKD 890
+ +
Sbjct: 383 MQCQAEQ 389
|
| >d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]} Length = 447 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Aspergillus niger [TaxId: 5061]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 20/138 (14%), Positives = 33/138 (23%), Gaps = 18/138 (13%)
Query: 510 KPKEPSLVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIY 569
P+ AG + A G ++ Y + +
Sbjct: 89 TYYVPNECYYNAETTSGPYAGLLDAYNHGNDYKARYGHLWNG-----------ETVVPFF 137
Query: 570 ASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLD-------NDSDASKHQN 622
+S GRV TA F +G L + +S ND +
Sbjct: 138 SSGYGRVIETARKFGEGFFGYNYSTNAALNIISESEVMGADSLTPTCDTDNDQTTCDNLT 197
Query: 623 IVKAKLHDLLQRDRTFTP 640
+ R + P
Sbjct: 198 YQLPQFKVAAARLNSQNP 215
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1266 | |||
| d1uc8a2 | 192 | Lysine biosynthesis enzyme LysX ATP-binding domain | 99.71 | |
| d1nd6a_ | 342 | Prostatic acid phosphatase {Human (Homo sapiens) [ | 99.65 | |
| d1i7na2 | 206 | Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 | 99.63 | |
| d1gsaa2 | 192 | Prokaryotic glutathione synthetase, C-domain {Esch | 99.63 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 99.51 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 99.44 | |
| d1qwoa_ | 435 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 99.33 | |
| d1ihpa_ | 438 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 99.29 | |
| d1qfxa_ | 447 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 99.24 | |
| d1ehia2 | 228 | D-alanine:D-lactate ligase VanA, C-domain {Leucono | 99.01 | |
| d1e4ea2 | 211 | D-alanine:D-lactate ligase VanA, C-domain {Enteroc | 99.01 | |
| d1iowa2 | 210 | D-ala-D-ala ligase, C-domain {Escherichia coli, ge | 98.92 | |
| d1vkza3 | 220 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 98.56 | |
| d3etja3 | 198 | N5-carboxyaminoimidazole ribonucleotide synthetase | 98.4 | |
| d2r85a2 | 235 | 5-formaminoimidazole-4-carboxamide ribonucleotide | 98.33 | |
| d1a9xa5 | 275 | Carbamoyl phosphate synthetase (CPS), large subuni | 98.2 | |
| d1ulza3 | 214 | Biotin carboxylase (BC), domain 2 {Aquifex aeolicu | 98.13 | |
| d1a9xa6 | 259 | Carbamoyl phosphate synthetase (CPS), large subuni | 98.01 | |
| d2r7ka2 | 238 | 5-formaminoimidazole-4-carboxamide ribonucleotide | 97.99 | |
| d1kjqa3 | 206 | Glycinamide ribonucleotide transformylase PurT, do | 97.97 | |
| d1gsoa3 | 224 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 97.9 | |
| d2j9ga3 | 216 | Biotin carboxylase (BC), domain 2 {Escherichia col | 97.71 | |
| d1w96a3 | 267 | Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye | 97.4 | |
| d1h2ea_ | 207 | Broad specificity phosphatase PhoE (YhfR) {Bacillu | 96.07 | |
| d1e58a_ | 247 | Phosphoglycerate mutase {Escherichia coli [TaxId: | 95.11 | |
| d2hhja1 | 248 | Phosphoglycerate mutase {Human (Homo sapiens) [Tax | 94.94 | |
| d1riia_ | 243 | Phosphoglycerate mutase {Mycobacterium tuberculosi | 94.58 | |
| d1fzta_ | 211 | Phosphoglycerate mutase {Fission yeast (Schizosacc | 94.36 | |
| d1bifa2 | 219 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 94.0 | |
| d1qhfa_ | 240 | Phosphoglycerate mutase {Baker's yeast (Saccharomy | 93.52 | |
| d1xq9a_ | 241 | Phosphoglycerate mutase {Plasmodium falciparum [Ta | 91.88 | |
| d1v37a_ | 171 | Alpha-ribazole-5'-phosphate phosphatase {Thermus t | 90.39 | |
| d1uc8a1 | 88 | Lysine biosynthesis enzyme LysX, N-terminal domain | 84.73 |
| >d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Lysine biosynthesis enzyme LysX ATP-binding domain domain: Lysine biosynthesis enzyme LysX ATP-binding domain species: Thermus thermophilus [TaxId: 274]
Probab=99.71 E-value=1.6e-17 Score=160.24 Aligned_cols=163 Identities=20% Similarity=0.224 Sum_probs=113.3
Q ss_pred HHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhc
Q psy10158 140 RRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219 (1266)
Q Consensus 140 Rr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lfr 219 (1266)
|++.+|.|+++|||+|+|++++.. .+..+.+.- +..|+|+||..|. .|.|+..+..
T Consensus 1 K~~~~~~l~~~GipvP~t~~~~~~---------~~~~~~~~~----~g~P~ivKP~~g~-----------~g~gv~~~~~ 56 (192)
T d1uc8a2 1 KWATSVALAKAGLPQPKTALATDR---------EEALRLMEA----FGYPVVLKPVIGS-----------WGRLLAXXXX 56 (192)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSH---------HHHHHHHHH----HCSSEEEECSBCC-----------BCSHHHHHHH
T ss_pred CHHHHHHHHHcCcCCCCEEEECCH---------HHHHHHHHH----hCCCEEEECCcCC-----------cccceeeccc
Confidence 788999999999999999998641 112222211 3499999999997 4667642222
Q ss_pred ccCCccccccCC--cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHH
Q psy10158 220 KIGSRSSVYSPE--SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEK 297 (1266)
Q Consensus 220 KignkSS~y~p~--s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK 297 (1266)
. ......+... .....+..+|.||||+....|++|+++|++++++..|+.+ .++.+........+..+.++..
T Consensus 57 ~-~~~~~~~~~~~~~~~~~~~~~lvqefi~g~~~~~~v~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 131 (192)
T d1uc8a2 57 X-XXXXXXXXXKEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRSA----HWITNTARGGQAENCPLTEEVA 131 (192)
T ss_dssp H-HC------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHHH
T ss_pred c-ccchhhHHHHHHHhccCCCCEEEEEecCCCCeeEEEEEECCEEEeEEEeeec----ccccccccccccccccchhhhh
Confidence 1 1111111111 1223567899999999877899999999999999999874 2555666677788999999999
Q ss_pred HHHHHHHHHhCCccceeeEEeeCCCeEEEeecCc
Q psy10158 298 LISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGF 331 (1266)
Q Consensus 298 ~IA~kaakAFGq~VCGfDLLRs~ggsyVcDVNGw 331 (1266)
.++.++++++++.+||||+++.++++||+|||.-
T Consensus 132 ~~~~~~~~~~~~g~~~vD~~~~~~~~~vlEiN~r 165 (192)
T d1uc8a2 132 RLSVKAAEAVGGGVVAVDLFESERGLLVNEVNHT 165 (192)
T ss_dssp HHHHHHHHHTTCSEEEEEEEEETTEEEEEEEETT
T ss_pred hhhhhHHHhhhccccceEEEecCCCEEEEEEcCC
Confidence 9999999999999999999999999999999964
|
| >d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Prostatic acid phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.2e-14 Score=152.61 Aligned_cols=259 Identities=20% Similarity=0.282 Sum_probs=155.7
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccc-cccceEEecCchhHHHHHHHHHHHhhcccCCc--------
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTF-RHDLKIYASDEGRVQMTAAAFAKGLLALEGEL-------- 594 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~-rhDlKIYSSdEgRVq~TAaaFAkglL~lEgeL-------- 594 (1266)
|+||+.|+.|+.+||+.||..|+. || +..| ..++.|+||+..|+++||++|+.||+..++..
T Consensus 36 G~LT~~G~~q~~~lG~~lr~~Y~~-------ll--~~~~~~~~i~v~st~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~ 106 (342)
T d1nd6a_ 36 GQLTQLGMEQHYELGEYIRKRYRK-------FL--NESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLW 106 (342)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHTTT-------TT--CSSCCGGGEEEEEESCHHHHHHHHHHHHHHSCCCGGGCSCTTCCC
T ss_pred chhhHHHHHHHHHHHHHHHHHHHH-------hc--CCcCCcceEEEEeCCChHHHHHHHHHHHhcCCCCcccccCccccc
Confidence 899999999999999999999974 33 3443 34699999999999999999999999754321
Q ss_pred CceeeeeecccccCCCCCCCCcchHHHHHHHHHHHHHHhcCCCCChhcccccCCCCcccHHHHHhhcCCHHHHHHHHHHH
Q psy10158 595 TPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHEL 674 (1266)
Q Consensus 595 tPIlVslVk~~~~~~LLDds~~a~~~md~vKk~L~~lL~~~~~~~~e~~~~l~p~~~~s~~~al~~i~nP~~~~~~v~~l 674 (1266)
.|+.+..+.......++-+........+.+++..+ . ++ +.+.+. ...++
T Consensus 107 ~~~~~~~~~~~~d~~~~~~~~~C~~~~~~~~~~~~----~-----~~------------~~~~~~----------~~~~~ 155 (342)
T d1nd6a_ 107 QPIPVHTVPLSEDQLLYLPFRNCPRFQELESETLK----S-----EE------------FQKRLH----------PYKDF 155 (342)
T ss_dssp CCCCCEEECGGGCSSSSCSCCSCHHHHHHHHHHHH----C-----HH------------HHHHHG----------GGHHH
T ss_pred cccceEeccCCcchhhcCCCcCChHHHHHHHHHHh----C-----hH------------HHHHHH----------HHHHH
Confidence 12222222221122222222222222211211111 0 11 000000 01111
Q ss_pred HHHHHHHHHhhccCcccccCcCCCCCCHHHHHHHHHHHHHHhhcccCcccCCCCCcchhhhhhhhhcCccccCcccHHHH
Q psy10158 675 IHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEEL 754 (1266)
Q Consensus 675 ~~~l~~~~~~~~~d~~~~~~~~c~gE~~~L~~eRW~KL~~dF~~~~k~fD~SKIpDiYD~iKYD~lHNr~fL~~~~l~EL 754 (1266)
++.+.+.+. ++. .++ .. .+.++||++.....||..+-.+ ...+.
T Consensus 156 ~~~~~~~~~------------~~~-~~~---~~-------------------~~~~~~d~~~~~~~~~~~~p~~-~~~~~ 199 (342)
T d1nd6a_ 156 IATLGKLSG------------LHG-QDL---FG-------------------IWSKVYDPLYCESVHNFTLPSW-ATEDT 199 (342)
T ss_dssp HHHHHHHHS------------CCS-SCH---HH-------------------HHHHTHHHHHHHHHTTCCCCTT-CCHHH
T ss_pred HHHHHHhhC------------CCc-ccH---HH-------------------HHHHHHHHHHHHHHcCCCCchh-cCHHH
Confidence 222211110 000 111 01 1125677777777788753222 23456
Q ss_pred HHHHHhhhcccccccccCCccchhhhHHhhhHHHHHHHHHHHHhhhhhhhhhhccCCCCCCCCCCCCCccceeEEEeccc
Q psy10158 755 YLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTSE 834 (1266)
Q Consensus 755 Y~laK~LaD~V~PQEYGIt~~EKL~IG~~is~pLLkKI~~DL~~~~ee~~es~~RL~p~ys~gV~SP~RhVRTRlYFTSE 834 (1266)
+...+.++++..-..||..... +++...+.||++.|+..|+..... + + ..+-.|||+-.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~il~~l~~~~~~---------~-------~---~~k~~l~sgHD 258 (342)
T d1nd6a_ 200 MTKLRELSELSLLSLYGIHKQK--EKSRLQGGVLVNEILNHMKRATQI---------P-------S---YKKLIMYSAHD 258 (342)
T ss_dssp HHHHHHHHHHHHHHHHSSSSHH--HHHHHTTHHHHHHHHHHHHHHHHS---------T-------T---CCSEEEEEECH
T ss_pred HHHHHHHHHHHHHHHhcCCCCC--cchhhhhhHHHHHHHHHHHHhhcC---------C-------C---CccEEEEecCc
Confidence 6666777777667788887664 467888999999999999743321 0 1 23578999999
Q ss_pred hhHHHHHHHHHhCCCCccccCChHHHHHHHhhhcCCCCccccccceeeeeeCCCCCCCCCCceEEEEEEcCCC
Q psy10158 835 SHIHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIELHFSPGV 907 (1266)
Q Consensus 835 SHIHTLLNvLr~ggl~~~~~~~d~~~~ram~~l~~ipELdYLSqIvf~LYE~~~~d~~~~~rf~Iei~~SpGa 907 (1266)
..|-.||..| |+.. ..+| .|-|+|+||||++. ..+.|++.+.-+.
T Consensus 259 ~ti~~ll~aL---g~~~----------------~~~P--p~as~l~fEl~~~~-------~~~~Vr~~yn~~~ 303 (342)
T d1nd6a_ 259 TTVSGLQMAL---DVYN----------------GLLP--PYASCHLTELYFEK-------GEYFVEMYYRNET 303 (342)
T ss_dssp HHHHHHHHHT---TCCC----------------SSCC--CTTCEEEEEEEEET-------TEEEEEEEEECCT
T ss_pred hHHHHHHHHh---cCcC----------------CCCC--CCcceEEEEEEEeC-------CceEEEEEEeCCc
Confidence 9999999987 3332 1366 58999999999962 3578999987663
|
| >d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Synapsin C-terminal domain domain: Synapsin II species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.63 E-value=2e-16 Score=158.89 Aligned_cols=191 Identities=15% Similarity=0.237 Sum_probs=127.1
Q ss_pred cCccchhhhhHHHHHHH--HHHhc-----CCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcc
Q psy10158 129 NNLNMQYDIQDRRKVYA--LLEKE-----GIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHN 201 (1266)
Q Consensus 129 Ndl~~Q~ilrDRr~vlq--iL~~~-----gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHN 201 (1266)
|+++++....||-.||. ++... ++|++.+..... ..+..... ..|+|+||..|.
T Consensus 1 Ns~~si~~~~dK~~v~~~l~~~~~~l~~~~~p~~~~~~~~~------------~~~~~~~~----~~PvVvKP~~g~--- 61 (206)
T d1i7na2 1 NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPN------------HREMLTLP----TFPVVVKIGHAH--- 61 (206)
T ss_dssp SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS------------GGGGSSCC----CSSEEEEESSCS---
T ss_pred CCHHHHHHhcCcHHHHHHHHHHhcccCCCccceeecccccc------------hhHHhhhc----CCceEEecCCCC---
Confidence 78888999999966543 22334 455444433321 11111122 389999999997
Q ss_pred eEEEeccCCCCchhhhhcccCCccccccCC-cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCceeec
Q psy10158 202 IYIYYPTSAGGGSQRLFRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERD 280 (1266)
Q Consensus 202 I~IYyp~s~GgGv~~LfrKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN 280 (1266)
.|.|+. +++ +....-... .....+..+|.||||+. +.|+||+++|++++++..|.. .|.++.|
T Consensus 62 --------~g~Gv~-~v~---~~~~l~~~~~~~~~~~~~~~vqe~I~~-~~dirv~vig~~~~~~~~~~~---~~~~~~n 125 (206)
T d1i7na2 62 --------SGMGKV-KVE---NHYDFQDIASVVALTQTYATAEPFIDA-KYDIRVQKIGNNYKAYMRTSI---SGNWKTN 125 (206)
T ss_dssp --------TTTTEE-EEC---SHHHHHHHHHHHHHHTCCEEEEECCCE-EEEEEEEEETTEEEEEEEESS---CTTTSCS
T ss_pred --------CCCCeE-EEe---ecchhhhHHHHHhhccCeEEEEEeecc-cceEEEEEEecceeEEEeecc---ccccccc
Confidence 477774 433 221111111 12235778999999974 489999999999999888865 4779999
Q ss_pred CCCCceeeEeeCCHHHHHHHHHHHHHhC-CccceeeEEee-CCCeEEEeecCceecccCchhhHHHHHHHHHHHHHhh
Q psy10158 281 SEGKEIRYPVILSNAEKLISRKVCLAFK-QTVCGFDLLRA-NGKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILREL 356 (1266)
Q Consensus 281 ~hgKEiRypV~LT~eEK~IA~kaakAFG-q~VCGfDLLRs-~ggsyVcDVNGwSFVK~n~kYYDdcA~ILr~~~l~~l 356 (1266)
.++++...+.. .+++++++.+++++++ +.+||||++.. +|++||+|||+-++-.-....+.+ .+++.+++++.+
T Consensus 126 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gvD~~~~~dG~~yvlEvN~~~~~~~~~~~~~~-~~~i~d~v~~~~ 201 (206)
T d1i7na2 126 TGSAMLEQIAM-SDRYKLWVDACSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVED-RQLITDLVISKM 201 (206)
T ss_dssp CCCSSEEEECC-CHHHHHHHHHHTTGGGCCSEEEEEEEEETTSCEEEEEEECTTCCCCSSCHHHH-HHHHHHHHHHHH
T ss_pred cccCccccccC-ChHHHHHHHHHhhhccccceeeEEEEEcCCCCEEEEEEcCCCcccccchHHHH-HHHHHHHHHHHH
Confidence 99888776655 4556667777777764 79999999997 678999999986543333222333 467777777665
|
| >d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: ATP-binding domain of peptide synthetases domain: Prokaryotic glutathione synthetase, C-domain species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=7.7e-17 Score=161.13 Aligned_cols=144 Identities=14% Similarity=0.205 Sum_probs=108.4
Q ss_pred CCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCc-
Q psy10158 154 IPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES- 232 (1266)
Q Consensus 154 ~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s- 232 (1266)
+|+|++++... +..++++-+ .|+|.||+.|. .|.|+. +++.. +......-+.
T Consensus 13 ~P~Tlit~~~~---------~~~~f~~~~-----g~vV~Kpl~gs-----------~G~gv~-~~~~~-~~~~~~~~~~~ 65 (192)
T d1gsaa2 13 TPETLVTRNKA---------QLKAFWEKH-----SDIILKPLDGM-----------GGASIF-RVKEG-DPNLGVIAETL 65 (192)
T ss_dssp SCCEEEESCHH---------HHHHHHHHH-----SSEEEECSSCC-----------TTTTCE-EECTT-CTTHHHHHHHH
T ss_pred CCCeEEECCHH---------HHHHHHHHc-----CCeEEEEcCCC-----------eEEEEE-EeecC-chhhhHHHHHH
Confidence 89999986421 122223223 48999999998 577773 55421 1111111011
Q ss_pred ccccCcceEEeeccCC-CCceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHHHHHHh---C
Q psy10158 233 RVRKSGSFIYEDFMPT-DGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRKVCLAF---K 308 (1266)
Q Consensus 233 ~vr~~gSyIYEEFI~t-~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~kaakAF---G 308 (1266)
.......+++|+|++. .|.|+||+|||++++.|+.|.+| .+|.+|.|.++|+...++.||+++.++|.++++++ |
T Consensus 66 ~~~~~~~~~~q~~~~~~~~~d~Rv~vv~~~~~~a~~r~~~-~~~~~~~n~~~Gg~~~~~~~~~~~~~~a~~~~~~l~~~g 144 (192)
T d1gsaa2 66 TEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIP-QGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKG 144 (192)
T ss_dssp TTTTTSCEEEEECCGGGGGCEEEEEEETTEECSEEEEEEC-CSSCSCCCGGGTCEEEEEECCHHHHHHHHHHHHHHHHTT
T ss_pred HhcCccccccccccccccCceeEEEEECCcceEEEEEecc-cCCcchhhhhccCcceeecccHHHHHHHHHHHHHHHhhc
Confidence 2235666788999985 78999999999999999888876 48999999999999999999999999999999887 9
Q ss_pred CccceeeEEeeCCCeEEEeec
Q psy10158 309 QTVCGFDLLRANGKSFVCDVN 329 (1266)
Q Consensus 309 q~VCGfDLLRs~ggsyVcDVN 329 (1266)
+.+|||||+ +.||+|||
T Consensus 145 l~~~gVDii----~~~~~EiN 161 (192)
T d1gsaa2 145 LIFVGLDII----GDRLTEIN 161 (192)
T ss_dssp CCEEEEEEE----TTEEEEEE
T ss_pred CceEEEEee----CCeEEEEE
Confidence 999999999 45778888
|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Glucose-1-phosphatase species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=1.7e-13 Score=143.32 Aligned_cols=62 Identities=23% Similarity=0.279 Sum_probs=54.3
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccc-cceEEecCchhHHHHHHHHHHHhhcc
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRH-DLKIYASDEGRVQMTAAAFAKGLLAL 590 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rh-DlKIYSSdEgRVq~TAaaFAkglL~l 590 (1266)
|+||+.|+.|..+||+.||..|+. .++|..+-+|.. +++|+||+-.|+++||+||+.||+.-
T Consensus 47 g~LT~~G~~q~~~lG~~lr~~Y~~-----~~~l~~~~~~~~~~v~vrst~~~Rt~~SA~afl~Gl~p~ 109 (391)
T d1nt4a_ 47 GQLTTKGGVLEVYMGHYMREWLAE-----QGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPG 109 (391)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHH-----TTSSCSSSCCCTTSEEEEECSSHHHHHHHHHHHHHHSTT
T ss_pred ccccHHHHHHHHHHHHHHHHHHHh-----hcCCCCCCCCCccceEEecCCChHHHHHHHHHHHHhCCC
Confidence 799999999999999999998974 356666666654 89999999999999999999999963
|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=1.5e-13 Score=145.68 Aligned_cols=62 Identities=32% Similarity=0.333 Sum_probs=52.0
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhccccc-ccceEEecCchhHHHHHHHHHHHhhcc
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFR-HDLKIYASDEGRVQMTAAAFAKGLLAL 590 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~r-hDlKIYSSdEgRVq~TAaaFAkglL~l 590 (1266)
|+||..|..|..+||+.||..|+.. +++.-+..|- .+++|+||+.-||.+||+||+.||+.-
T Consensus 44 G~LT~~G~~q~~~lG~~lr~~Y~~~-----~~~~~~~~~~~~~i~vrSt~~~Rt~~SA~afl~Gl~p~ 106 (409)
T d1dkla_ 44 GWLTPRGGELIAYLGHYQRQRLVAD-----GLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPD 106 (409)
T ss_dssp TSBCHHHHHHHHHHHHHHHHHHHHT-----TSSCSSSCCCTTTEEEEECSSHHHHHHHHHHHHHHSTT
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHh-----ccCCCCCCCCccceEEEeCCChHHHHHHHHHHHhcCCC
Confidence 8999999999999999999989852 3332244444 379999999999999999999999963
|
| >d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Aspergillus fumigatus [TaxId: 5085]
Probab=99.33 E-value=2.6e-11 Score=131.02 Aligned_cols=57 Identities=28% Similarity=0.300 Sum_probs=50.0
Q ss_pred CCccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhccc
Q psy10158 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALE 591 (1266)
Q Consensus 523 GGElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lE 591 (1266)
.|+||+.|+.|..+||+.||..||. ++ + .+++.|+||+-.|+.+||++|+.||+...
T Consensus 95 ~gqLT~~G~~q~~~LG~~lr~rY~~-------~~--~---~~~i~vrST~~~RTi~SA~afl~GL~p~~ 151 (435)
T d1qwoa_ 95 ADDLTPFGEQQLVNSGIKFYQRYKA-------LA--R---SVVPFIRASGSDRVIASGEKFIEGFQQAK 151 (435)
T ss_dssp SSSBCHHHHHHHHHHHHHHHHHTHH-------HH--T---TCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHhHh-------hc--C---ccceEEEecCchHHHHHHHHHHHhcCCCc
Confidence 4899999999999999999998963 43 2 35789999999999999999999999743
|
| >d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Aspergillus ficuum [TaxId: 5058]
Probab=99.29 E-value=1.4e-10 Score=125.79 Aligned_cols=56 Identities=25% Similarity=0.297 Sum_probs=49.3
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhccc
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALE 591 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lE 591 (1266)
|+||..|+.|..+||+.||..||. ++ + ..++.|+||+-.|+.+||++|..||+...
T Consensus 97 GqLT~~G~~q~~~lG~~lR~rY~~-------~~--~---~~~i~vrST~~~RTi~SA~afl~GL~p~~ 152 (438)
T d1ihpa_ 97 DDLTPFGEQELVNSGIKFYQRYES-------LT--R---NIVPFIRSSGSSRVIASGKKFIEGFQSTK 152 (438)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHTHH-------HH--T---TCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhHH-------hc--C---CCceEEEeCCcHHHHHHHHHHHHHhcCCc
Confidence 899999999999999999999973 43 2 34789999999999999999999999643
|
| >d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Aspergillus niger [TaxId: 5061]
Probab=99.24 E-value=2.6e-10 Score=125.98 Aligned_cols=59 Identities=24% Similarity=0.329 Sum_probs=50.7
Q ss_pred CccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhcccCC
Q psy10158 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGE 593 (1266)
Q Consensus 524 GElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~lEge 593 (1266)
|+||..|+.|...||+.||..||. || .. ..+++|+||+..|+++||++|..||+..+..
T Consensus 103 g~LT~~G~~q~~~LG~~lR~rY~~-------ll--~~--~~~v~~rST~~~RT~~SA~afl~Gl~p~~~~ 161 (447)
T d1qfxa_ 103 TSGPYAGLLDAYNHGNDYKARYGH-------LW--NG--ETVVPFFSSGYGRVIETARKFGEGFFGYNYS 161 (447)
T ss_dssp CSSTTCHHHHHHHHHHHHHHHHGG-------GC--CS--SSCEEEEEESBHHHHHHHHHHHHHHHGGGHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhhh-------hc--cC--cCceEEEecCchHHHHHHHHHHHHhcCCccC
Confidence 899999999999999999998963 43 22 2379999999999999999999999976543
|
| >d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: ATP-binding domain of peptide synthetases domain: D-alanine:D-lactate ligase VanA, C-domain species: Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]
Probab=99.01 E-value=6.1e-10 Score=110.68 Aligned_cols=190 Identities=16% Similarity=0.179 Sum_probs=112.9
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||.++.++|.++|||+|++.+++.... ..+.+.---..+..|+|+||++|. .|.|+. .
T Consensus 1 dK~~~k~~l~~~gi~tp~~~~~~~~~~---------~~~~~~~~~~~~g~P~VvKP~~g~-----------~s~GV~-~- 58 (228)
T d1ehia2 1 DKALTKELLTVNGIRNTKYIVVDPESA---------NNWSWDKIVAELGNIVFVKAANQG-----------SSVGIS-R- 58 (228)
T ss_dssp SHHHHHHHHHTTTCCCCCEEEECTTGG---------GGCCHHHHHHHHCSCEEEEESSCC-----------TTTTEE-E-
T ss_pred CHHHHHHHHHHcCCCCCCEEEEchhhc---------ChHHHHHHHHHhCCCEEEEEeccC-----------CCccce-e-
Confidence 689999999999999999999975321 111111011234599999999986 355652 2
Q ss_pred cccCCccccccCC--cccccCcceEEeeccCCCCceEEEEEECCc--ee---EEee-ccCCCCCCcee--ecCCCCc---
Q psy10158 219 RKIGSRSSVYSPE--SRVRKSGSFIYEDFMPTDGTDVKVYTVGPD--YA---HAEA-RKSPALDGKVE--RDSEGKE--- 285 (1266)
Q Consensus 219 rKignkSS~y~p~--s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~--~v---hAe~-RKSPvvDG~VR--RN~hgKE--- 285 (1266)
+.|.. ++... ........++.|||+.. +..+-+.+++.. ++ .++. ......++.++ .....++
T Consensus 59 --~~~~~-el~~~~~~~~~~~~~~liee~i~g-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 134 (228)
T d1ehia2 59 --VTNAE-EYTEALSDSFQYDYKVLIEEAVNG-ARELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVH 134 (228)
T ss_dssp --ECSHH-HHHHHHHHHTTTCSCEEEEECCCC-SCEEEEEEEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCE
T ss_pred --ccccc-hhhhhhhhhcccccccccceEEec-cceEEEEEeeCCCcceeeeeeeeccccccccceeeeecccccccccc
Confidence 22221 22111 12335678999999975 244555444432 11 1111 11211233222 1112222
Q ss_pred eeeEeeCCHHH----HHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeec---Cc---ee-----cccCchhhHHHHHHH
Q psy10158 286 IRYPVILSNAE----KLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVN---GF---SF-----VKNSNKYYDDSAKIL 348 (1266)
Q Consensus 286 iRypV~LT~eE----K~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVN---Gw---SF-----VK~n~kYYDdcA~IL 348 (1266)
...+..++++. +++|.++++++|.. ++.+|++.. +|.+||+||| || |. ......|++=...|+
T Consensus 135 ~~~~~~~~~~~~~~i~~~~~~~~~~lg~~~~~~iD~~~d~~g~~~~lEvN~~Pg~~~~s~~~~~~~~~G~~~~~li~~ii 214 (228)
T d1ehia2 135 FQIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLDENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLI 214 (228)
T ss_dssp EESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHHHHHHHHHhhhhcCCeeeEEEEEcCCCcEEEEEecCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 23455566644 44778888999986 555998874 6889999999 65 33 335678888878888
Q ss_pred HHHHHH
Q psy10158 349 GNMILR 354 (1266)
Q Consensus 349 r~~~l~ 354 (1266)
..-+-+
T Consensus 215 ~~~~~~ 220 (228)
T d1ehia2 215 DYGFED 220 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776533
|
| >d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: ATP-binding domain of peptide synthetases domain: D-alanine:D-lactate ligase VanA, C-domain species: Enterococcus faecium [TaxId: 1352]
Probab=99.01 E-value=9.5e-10 Score=108.04 Aligned_cols=159 Identities=19% Similarity=0.297 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||++++++++++|||+|++.+++.+.. . . + ..|..|+|+||++|- .|.|+. +.
T Consensus 1 DK~~~~~~~~~~Gi~tP~~~~~~~~~~-~----~------~----~~~~fP~viKP~~gg-----------~s~Gv~-~v 53 (211)
T d1e4ea2 1 DKSLTYIVAKNAGIATPAFWVINKDDR-P----V------A----ATFTYPVFVKPARSG-----------SSFGVK-KV 53 (211)
T ss_dssp SHHHHHHHHHHTTCBCCCEEEECTTCC-C----C------G----GGSCSCEEEEESSCC-----------TTTTCE-EE
T ss_pred CHHHHHHHHHHCCCCCCCeEEECchhH-H----H------H----HhcCCCEEEeecccc-----------Ccchhc-cc
Confidence 799999999999999999999964321 0 0 0 124689999999875 355653 22
Q ss_pred cccCCccccccC-CcccccCcceEEeeccCCCCceEEEEEECCceeEEe--eccCCCCCCce---e---ecCCCCcee--
Q psy10158 219 RKIGSRSSVYSP-ESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAE--ARKSPALDGKV---E---RDSEGKEIR-- 287 (1266)
Q Consensus 219 rKignkSS~y~p-~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe--~RKSPvvDG~V---R---RN~hgKEiR-- 287 (1266)
+ +....-.. +........++.|+|+. |..+-+++++....--. -..-....|.. . ......+..
T Consensus 54 ~---~~~el~~~~~~~~~~~~~~~~e~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (211)
T d1e4ea2 54 N---SADELDYAIESARQYDSKILIEQAVS--GCEVGCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVIT 128 (211)
T ss_dssp C---SGGGHHHHHHHHTTTCSSEEEEECCC--SEEEEEEEEEETTCCEECCCEEEEESSSCCCGGGSSSGGGCCSSEEEC
T ss_pred c---ccccchhhcccccccccccccccccc--cccceeeccCCCcceeeeeceeeccccchhhhhhhhhhcccccceeee
Confidence 2 22221111 01223566799999995 77888888775432111 00000001111 0 111122222
Q ss_pred eEeeCCH----HHHHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeec
Q psy10158 288 YPVILSN----AEKLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVN 329 (1266)
Q Consensus 288 ypV~LT~----eEK~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVN 329 (1266)
.|..+++ +-+++|.++++++|.. +|+||++.. +|++||+|||
T Consensus 129 ~p~~~~~~~~~~i~~~a~~~~~~lg~~g~~~id~~~~~~g~~~viEiN 176 (211)
T d1e4ea2 129 VPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLNEVN 176 (211)
T ss_dssp SSCSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCEEEEEEE
T ss_pred ccccccHhhhhhhHHHHHHHHHhhccCCeeEEEEEEcCCCCEEEEEEe
Confidence 2334443 4567889999999987 999999986 6779999999
|
| >d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: ATP-binding domain of peptide synthetases domain: D-ala-D-ala ligase, C-domain species: Escherichia coli, gene ddlB [TaxId: 562]
Probab=98.92 E-value=2.6e-10 Score=112.06 Aligned_cols=164 Identities=12% Similarity=0.192 Sum_probs=101.1
Q ss_pred HHHHHHHHHhcCCCCCCeEEeccCCCCCcccccccc-CCeE-EEcCeEecCCEEEecccccCcceEEEeccCCCCchhhh
Q psy10158 140 RRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVES-EDHV-EVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 217 (1266)
Q Consensus 140 Rr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~-~D~I-~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~L 217 (1266)
|.++-++|+++|||||++..+++... .... ++.+ .+. .|..|+|+||..|. .|.|+. .
T Consensus 1 K~~tk~~~~~~Giptp~~~~~~~~~~------~~~~~~~~~~~~~--~l~~P~vvKP~~g~-----------~s~Gv~-~ 60 (210)
T d1iowa2 1 KLRSKLLWQGAGLPVAPWVALTRAEF------EKGLSDKQLAEIS--ALGLPVIVKPSREG-----------SSVGMS-K 60 (210)
T ss_dssp HHHHHHHHHHTTCCBCCEEEEEHHHH------HHCCCTHHHHHHH--TTCSSEEEEETTCC-----------TTTTCE-E
T ss_pred CHHHHHHHHHcCCCCCCeEEEechhh------cccchHHHHHHHH--hcCCCEEEeecccc-----------Cceecc-c
Confidence 67899999999999999999864210 0000 0000 111 24699999999987 466764 3
Q ss_pred hcccCCccccccCC-cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccCCCCCCcee----ecCCCCceeeEee-
Q psy10158 218 FRKIGSRSSVYSPE-SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVE----RDSEGKEIRYPVI- 291 (1266)
Q Consensus 218 frKignkSS~y~p~-s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKSPvvDG~VR----RN~hgKEiRypV~- 291 (1266)
+.|....-..- .....+..++.|+|+. |.++.|+++|+....... -.| .++.+. .+........+..
T Consensus 61 ---v~~~~el~~~~~~~~~~~~~vlve~~i~--g~e~~~~v~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 133 (210)
T d1iowa2 61 ---VVAENALQDALRLAFQHDEEVLIEKWLS--GPEFTVAILGEEILPSIR-IQP-SGTFYDYEAKFLSDETQYFCPAGL 133 (210)
T ss_dssp ---ESSGGGHHHHHHHHTTTCSEEEEEECCC--CCEEEEEEETTEECCCEE-EEC-SSSSSCHHHHHTCSCCEEESSCCC
T ss_pred ---ccchhhhhHHHHHhhccCcccccccccc--CceeEEEeecCcccceeE-Eec-ccceeeeccccccccccccccccc
Confidence 32222211110 1224567899999995 889999999875433322 111 111111 1112222222333
Q ss_pred ---CCHHHHHHHHHHHHHhCCc-cceeeEEee-CCCeEEEeecC
Q psy10158 292 ---LSNAEKLISRKVCLAFKQT-VCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 292 ---LT~eEK~IA~kaakAFGq~-VCGfDLLRs-~ggsyVcDVNG 330 (1266)
+..+-+++|.++++++|.. +|.||++.. +|.+||+|||.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~g~~~vdf~~d~~g~~~~lEiN~ 177 (210)
T d1iowa2 134 EASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANT 177 (210)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEES
T ss_pred ccccchhHHHHHHHHHHHhCCCCceEEEEEECCCCCEEEEEEeC
Confidence 3345677899999999988 888998885 67899999994
|
| >d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 species: Thermotoga maritima [TaxId: 2336]
Probab=98.56 E-value=1.6e-08 Score=100.56 Aligned_cols=167 Identities=16% Similarity=0.204 Sum_probs=99.8
Q ss_pred HHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhc
Q psy10158 140 RRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219 (1266)
Q Consensus 140 Rr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lfr 219 (1266)
|-.+=++|.++|||+|++..++.. .+..+.+. .+..|+|+||.+|. .|.|+. +.+
T Consensus 2 K~~~K~~l~~~gIptp~~~~~~~~---------~e~~~~~~----~ig~PvVvKP~~~~-----------gs~Gv~-~v~ 56 (220)
T d1vkza3 2 KVYAKRFMKKYGIRTARFEVAETP---------EELREKIK----KFSPPYVIKADGLA-----------RGKGVL-ILD 56 (220)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSH---------HHHHHHHT----TSCSSEEEEESSCC-----------SSCCEE-EES
T ss_pred HHHHHHHHHHCCCCCCCeEEeCCH---------HHHHHHHH----HcCCCEEEEecccc-----------ccccce-eec
Confidence 444557899999999999988641 11222221 24599999999886 466664 333
Q ss_pred ccCCcccccc----CCcccccCcceEEeeccCCCCceEEEEEECCceeEE-eeccC-CCCCCceeecCCCCceee----E
Q psy10158 220 KIGSRSSVYS----PESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHA-EARKS-PALDGKVERDSEGKEIRY----P 289 (1266)
Q Consensus 220 KignkSS~y~----p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhA-e~RKS-PvvDG~VRRN~hgKEiRy----p 289 (1266)
...+-.+.+. -...-..+..+|.|||+.-..-.|-+++-|..+..- ..|.- ...+|....+..+.+.-. +
T Consensus 57 ~~~el~~a~~~~~~~~~~~~~~~~vliEe~i~g~e~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (220)
T d1vkza3 57 SKEETIEKGSKLIIGELIKGVKGPVVIDEFLAGNELSAMAVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGSWGPVEIP 136 (220)
T ss_dssp SHHHHHHHHHHHHHTSSSTTCCSCEEEEECCCSEEEEEEEEEETTEEEECCCCEECCEEETTTEEEECSCSEEEECCCCC
T ss_pred cHHHHHHHhhhhccccccccccceEeeecccccccceeEEEEeCCEEEEcccccccccccccccccccccccccccCCcc
Confidence 2111011111 011113467799999998655667778778775542 22221 112455555555554433 3
Q ss_pred eeCCHHHHHHHHHHHHHhC---C---ccceeeEEeeCCCeEEEeecCc
Q psy10158 290 VILSNAEKLISRKVCLAFK---Q---TVCGFDLLRANGKSFVCDVNGF 331 (1266)
Q Consensus 290 V~LT~eEK~IA~kaakAFG---q---~VCGfDLLRs~ggsyVcDVNGw 331 (1266)
..+..+++++...+++++. . .++.+|++-.+++|||+|||.=
T Consensus 137 ~~~~~~~~~~~~~~~~a~~~~~~~~~G~~~~d~~~~~~gp~viEiN~R 184 (220)
T d1vkza3 137 SDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGDPYILEYNVR 184 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTEEEEEEEESS
T ss_pred chhhHHHHHHHHHHHHHHhhhhhhhhccceeEEEeeCCCEEEEEEECC
Confidence 3444566666666666653 2 4556899888999999999974
|
| >d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=3.9e-07 Score=87.43 Aligned_cols=158 Identities=11% Similarity=0.017 Sum_probs=91.6
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||.+.=++|+++|||+|++..+.... +..+.+. .+..|+|+||..|. .|+|+.++.
T Consensus 1 DK~~~K~~l~~~GIptp~~~~v~s~~---------d~~~~~~----~ig~P~vvKp~~~~-----------~~~~~~~v~ 56 (198)
T d3etja3 1 DRLTQKQLFDKLHLPTAPWQLLAERS---------EWPAVFD----RLGELAIVKRRTGG-----------YDGRGQWRL 56 (198)
T ss_dssp SHHHHHHHHHHTTCCBCCEEEECCGG---------GHHHHHH----HHCSCEEEEESSSC-----------BTTBSEEEE
T ss_pred CHHHHHHHHHHCCcCCCCceEECCHH---------HHHHHHH----HcCCCeeeeecccc-----------cccceeeec
Confidence 67777899999999999999996421 1222222 23499999998886 355554444
Q ss_pred cccCCccccccCCcccccCcceEEeeccCCCC-ceEEEEEECCceeEEeeccCCCCCCceeecCCCCceeeEeeCCH---
Q psy10158 219 RKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG-TDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSN--- 294 (1266)
Q Consensus 219 rKignkSS~y~p~s~vr~~gSyIYEEFI~t~G-tDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT~--- 294 (1266)
+.- .. .......++.+|.|||+.-+. ..+=++.-+...+.- -.+ .-...........-.+..+++
T Consensus 57 ~~~----~~--~~~~~~~~~~~i~ee~i~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~p~~~~~~~~ 125 (198)
T d3etja3 57 RAN----ET--EQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVF---YPL--THNLHQDGILRTSVAFPQANAQQQ 125 (198)
T ss_dssp CGG----GG--GGSCGGGTTTEEEEECCCCSEEEEEEEEECTTSCEEE---CCC--EEEEEETTEEEEEEECSSCCHHHH
T ss_pred chh----hH--HHHHhccCceEEEeeeccccccccceeeecccceeee---ece--eeccccccceeeeeeccccccchh
Confidence 321 11 112234678899999998432 222222212221110 111 000111111222333444443
Q ss_pred -HHHHHHHHHHHHhCCc-cceeeEEeeCCCeEEEeecCc
Q psy10158 295 -AEKLISRKVCLAFKQT-VCGFDLLRANGKSFVCDVNGF 331 (1266)
Q Consensus 295 -eEK~IA~kaakAFGq~-VCGfDLLRs~ggsyVcDVNGw 331 (1266)
+...+|.+++++++.. +..+|+...+++.||||||.=
T Consensus 126 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~v~Evn~R 164 (198)
T d3etja3 126 ARAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPR 164 (198)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEESS
T ss_pred hhhhhhhhHHHHhhhhcccchhheeecCCcEEEEEEECC
Confidence 4567888888888754 457888889999999999954
|
| >d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: PurP ATP-binding domain-like domain: 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP species: Pyrococcus furiosus [TaxId: 2261]
Probab=98.33 E-value=1e-06 Score=87.82 Aligned_cols=154 Identities=16% Similarity=0.099 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||.+.-++|+++|||+|+++.. .++ |..|+|+||.+|. .|.|+. +.
T Consensus 1 DK~~~k~~l~~~Gip~P~~~~~--------------~~~--------i~~P~IVKP~~g~-----------gs~Gv~-~v 46 (235)
T d2r85a2 1 DRNLERKWLKKAGIRVPEVYED--------------PDD--------IEKPVIVKPHGAK-----------GGKGYF-LA 46 (235)
T ss_dssp SHHHHHHHHHHTTCCCCCBCSC--------------GGG--------CCSCEEEEECC---------------TTCE-EE
T ss_pred CHHHHHHHHHHcCCCCchhhhC--------------HHH--------cCCCEEEEECCCC-----------CCCCeE-EE
Confidence 6888899999999999985321 111 3489999999997 355663 33
Q ss_pred cccCCccccccC-------CcccccCcceEEeeccCCCCceEEEEEECC---ceeEEeec-cCCCCCCceee-----cCC
Q psy10158 219 RKIGSRSSVYSP-------ESRVRKSGSFIYEDFMPTDGTDVKVYTVGP---DYAHAEAR-KSPALDGKVER-----DSE 282 (1266)
Q Consensus 219 rKignkSS~y~p-------~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp---~~vhAe~R-KSPvvDG~VRR-----N~h 282 (1266)
+ +.. ++.. ...-.....+|.|||++-.-..+-++.-.. ..+.+..+ .....+|...+ ..+
T Consensus 47 ~---~~~-e~~~~~~~~~~~~~~~~~~~~iiee~i~G~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (235)
T d2r85a2 47 K---DPE-DFWRKAEKFLGIKRKEDLKNIQIQEYVLGVPVYPHYFYSKVREELELMSIDRRYESNVDAIGRIPAKDQLEF 122 (235)
T ss_dssp S---SHH-HHHHHHHHHHCCCSGGGCCSEEEEECCCCEEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGGGSCHHHHTTS
T ss_pred e---chH-HHHHHHHHHHhhhhhCCCcchhHHhhcCCeEEEEEEeecccccceEEEEeecCCcceeeEEEeccceeEecc
Confidence 2 111 1110 001123567999999964222233322211 11222222 12222343321 111
Q ss_pred CCc------eeeEe----eCCHHHHHHHHHHHHHh------CCccceeeEEee-CCCeEEEeecC
Q psy10158 283 GKE------IRYPV----ILSNAEKLISRKVCLAF------KQTVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 283 gKE------iRypV----~LT~eEK~IA~kaakAF------Gq~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
+.. ..-+. .+..+-+++|.++++++ ...+++||+++. +|..||+|||.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~G~~~ve~~~~~dg~~~viEiNp 187 (235)
T d2r85a2 123 DMDITYTVIGNIPIVLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISA 187 (235)
T ss_dssp CCCCCEEEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECTTSCEEEEEEEC
T ss_pred cCCCCcceeeccCcccchhHHHHHHHHHHHHHHHHHHhcCCceeeeeEEEEEcCCCCEEEEEEeC
Confidence 111 11122 33345577888888886 456899999987 66789999994
|
| >d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains species: Escherichia coli [TaxId: 562]
Probab=98.20 E-value=7.5e-07 Score=93.03 Aligned_cols=163 Identities=13% Similarity=0.131 Sum_probs=104.9
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||.+.-++|.+.|||+|++..++. +.+..+++. .|..|+|+||..|- .|.|++ ++
T Consensus 1 Dr~~~r~~~~~~gip~~~~~~~~~---------~~ea~~~~~----~ig~PvviKp~~~~-----------gg~G~~-~v 55 (275)
T d1a9xa5 1 DRRRFDVAMKKIGLETARSGIAHT---------MEEALAVAA----DVGFPCIIRPSFTM-----------GGSGGG-IA 55 (275)
T ss_dssp SHHHHHHHHHHTTCCCCSEEEESS---------HHHHHHHHH----HHCSSEEEEETTCC-----------TTTTCE-EE
T ss_pred CHHHHHHHHHHCCCCCCCceEeCC---------HHHHHHHHH----HcCCCEEEEECCCC-----------CCCceE-Ee
Confidence 678888999999999999988863 111112221 23499999998886 366764 44
Q ss_pred cccCCccccccCCcccccCcceEEeeccCCCCceEEEEEECC---c--eeEEeeccCCCCCCceeecCCCCceeeEeeCC
Q psy10158 219 RKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGP---D--YAHAEARKSPALDGKVERDSEGKEIRYPVILS 293 (1266)
Q Consensus 219 rKignkSS~y~p~s~vr~~gSyIYEEFI~t~GtDVKVYtVGp---~--~vhAe~RKSPvvDG~VRRN~hgKEiRypV~LT 293 (1266)
.....-...+.--.....+..++.||||.- ..-|-|-+++. . ++++..|..+. .+++-+..++.-+-.|+
T Consensus 56 ~~~~el~~~~~~a~~~~~~~~v~iEe~l~g-~~e~~v~~~~d~~g~~~~~~~~~~~~~~----~~~~~~~~~~aP~~~L~ 130 (275)
T d1a9xa5 56 YNREEFEEICARGLDLSPTKELLIDESLIG-WKEYEMEVVRDKNDNCIIVCSIENFDAM----GIHTGDSITVAPAQTLT 130 (275)
T ss_dssp SSHHHHHHHHHHHHHHCTTSCEEEEECCTT-SEEEEEEEEECTTCCEEEEEEEEESSCT----TSCGGGSCEEESCCSCC
T ss_pred eCHHHHHHHHHHHHhhCCCCcEEEeeecCC-chhheeeeEEecCCCEEEEEeecccccc----CcccCceeEEcCCCcCC
Confidence 321100000000011235677999999984 34466666642 2 45777887753 44555555665566799
Q ss_pred HHHH----HHHHHHHHHhCCc--cceeeEEee--CCCeEEEeecCc
Q psy10158 294 NAEK----LISRKVCLAFKQT--VCGFDLLRA--NGKSFVCDVNGF 331 (1266)
Q Consensus 294 ~eEK----~IA~kaakAFGq~--VCGfDLLRs--~ggsyVcDVNGw 331 (1266)
++++ ++|.++++++|.. ++-|.+|-. +|.-|++|||--
T Consensus 131 ~~~~~~i~~~a~~i~~~lg~~~G~~~~ef~~~~~~~~~~~iE~npR 176 (275)
T d1a9xa5 131 DKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPR 176 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHcCceECceEEEEEEeCCCCEEEEEEecCC
Confidence 8764 4678999999974 566788765 578999999954
|
| >d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Biotin carboxylase (BC), domain 2 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.13 E-value=7.5e-07 Score=88.56 Aligned_cols=157 Identities=16% Similarity=0.254 Sum_probs=83.8
Q ss_pred HHHHHHHHHhcCCCC-CCeE-EeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhh
Q psy10158 140 RRKVYALLEKEGIEI-PRYA-VLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRL 217 (1266)
Q Consensus 140 Rr~vlqiL~~~gIp~-P~tv-~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~L 217 (1266)
|.++-++|+++|||+ |.+. .++. +.+....+. .+..|+|+||.+|. .|.|+. .
T Consensus 1 K~~~k~~~~~aGvP~~p~~~~~v~s---------~~ea~~~~~----~ig~P~vvKP~~~~-----------~s~gv~-~ 55 (214)
T d1ulza3 1 KARSKEVMKKAGVPVVPGSDGVLKS---------LEEAKALAR----EIGYPVLLKATAGG-----------GGRGIR-I 55 (214)
T ss_dssp HHHHHHHHHHTTCCBCCBCSSSCCC---------HHHHHHHHH----HHCSSEEEEECSSS-----------SCCSCE-E
T ss_pred CHHHHHHHHHcCCCcCCCcCCCCCC---------HHHHHHHHH----HcCCCEEEeecccc-----------CCccce-e
Confidence 345668999999996 7653 2321 111222221 23499999999886 355553 2
Q ss_pred hcccCCcccccc------CC-cccccCcceEEeeccCCCCceEEE--EEECCc-eeEEeeccCCCCCCceeecCC-CCce
Q psy10158 218 FRKIGSRSSVYS------PE-SRVRKSGSFIYEDFMPTDGTDVKV--YTVGPD-YAHAEARKSPALDGKVERDSE-GKEI 286 (1266)
Q Consensus 218 frKignkSS~y~------p~-s~vr~~gSyIYEEFI~t~GtDVKV--YtVGp~-~vhAe~RKSPvvDG~VRRN~h-gKEi 286 (1266)
.++ ...... .+ ......+.+|.||||+ |...-+ ++.+++ .+..-..+- -.+.++.. ....
T Consensus 56 v~~---~~el~~a~~~~~~~~~~~~~~~~viiEe~i~--G~e~~~~~~~~d~~~~~~~i~~~~----~~~~~~~~~~~~~ 126 (214)
T d1ulza3 56 CRN---EEELVKNYEQASREAEKAFGRGDLLLEKFIE--NPKHIEYQVLGDKHGNVIHLGERD----CSIQRRNQKLVEI 126 (214)
T ss_dssp ESS---HHHHHHHHHHHHHHHHHTTSCCCEEEEECCC--SCEEEEEEEEECTTSCEEEEEEEE----EEEEETTEEEEEE
T ss_pred eec---cHHHHHHHHHHHHHHHHhcCCCCceeheeec--CcceeeEEEEEcCCCeEEEEeccc----cccCccccceeEE
Confidence 222 111100 00 0112467799999997 322222 222222 222221110 00111111 1112
Q ss_pred eeEeeCCH----HHHHHHHHHHHHhC-CccceeeEEee-CCCeEEEeecC
Q psy10158 287 RYPVILSN----AEKLISRKVCLAFK-QTVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 287 RypV~LT~----eEK~IA~kaakAFG-q~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
..+..+++ +-+++|.++++++| ..+|.+|.+.. +|++||||+|.
T Consensus 127 ~~~~~~~~e~~~~~~~~~~~~~~~lg~~G~~~vef~~~~dg~~~~iEin~ 176 (214)
T d1ulza3 127 APSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQEGNLYFIEMNT 176 (214)
T ss_dssp ESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEEC
T ss_pred eecccccHHHHHHHHHHHHHHHHHcCCccceEEEEEECCCCCEEEEEecC
Confidence 22334555 34678999999999 45777897776 66799999997
|
| >d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1.6e-06 Score=90.93 Aligned_cols=157 Identities=13% Similarity=0.163 Sum_probs=88.2
Q ss_pred HHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCC
Q psy10158 144 YALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGS 223 (1266)
Q Consensus 144 lqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKign 223 (1266)
.++|++.|||+|++.++.. .++.+.. -+.|+.|+|+||..|. .|.|++ +.+....
T Consensus 3 ~~~l~~lgi~~p~~~~v~s------------~~ea~~~-a~~iGfPvivKps~~~-----------gG~G~~-iv~~~~e 57 (259)
T d1a9xa6 3 QHAVERLKLKQPANATVTA------------IEMAVEK-AKEIGYPLVVRASYVL-----------GGRAME-IVYDEAD 57 (259)
T ss_dssp HHHHHHHTCCCCCEEECCS------------HHHHHHH-HHHHCSSEEEEC------------------CEE-EECSHHH
T ss_pred HHHHHHCCCCCCCceEECC------------HHHHHHH-HHHhCCCEEEEECCCC-----------CCCccE-eecCHHH
Confidence 3789999999999999964 1122211 1124599999999886 355664 4432221
Q ss_pred ccccccCCcccccCcceEEeeccCC-CCceEEEEEECCceeEEeeccCCCCCCceeecCCCCc---eeeEeeCCHHH---
Q psy10158 224 RSSVYSPESRVRKSGSFIYEDFMPT-DGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKE---IRYPVILSNAE--- 296 (1266)
Q Consensus 224 kSS~y~p~s~vr~~gSyIYEEFI~t-~GtDVKVYtVGp~~vhAe~RKSPvvDG~VRRN~hgKE---iRypV~LT~eE--- 296 (1266)
-...+.-....-.++.++.|+||.. .--+|-+..=|..++-+--... ++ ++..|-++ +.-+..|++++
T Consensus 58 l~~~~~~a~~~~~~~~vlie~~i~~~~Eiev~~i~Dg~~~~i~~i~e~--i~---~~gvhsgds~~~~p~~~l~~~~~~~ 132 (259)
T d1a9xa6 58 LRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEH--IE---QAGVHSGDSACSLPAYTLSQEIQDV 132 (259)
T ss_dssp HHHHHHHCC--------EEEBCCTTCEEEEEEEEECSSCEEEEEEEEE--SS---CTTSCGGGCCEEESCSSCCHHHHHH
T ss_pred HHHHhhhhhcccccchhhhhhhcCCCeEEEEEEEEeCCcEEEEeeeec--cc---cCcceeEeccccccCccCCHHHHHH
Confidence 1111111112235678999999985 2345556555554332211111 01 12334333 23456688877
Q ss_pred -HHHHHHHHHHhCC-ccceeeEEeeCCCeEEEeecC
Q psy10158 297 -KLISRKVCLAFKQ-TVCGFDLLRANGKSFVCDVNG 330 (1266)
Q Consensus 297 -K~IA~kaakAFGq-~VCGfDLLRs~ggsyVcDVNG 330 (1266)
+++|.++++++|. .+|+|+++-.++..||+|||=
T Consensus 133 l~~~a~kia~~l~~~G~~~vef~v~~~~~y~iEvNp 168 (259)
T d1a9xa6 133 MRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNP 168 (259)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEECSSCEEEEEEEC
T ss_pred HHHHHHHHHHHhhhccceeEEEEEECCEEEEEEccc
Confidence 5688999999997 899999999899999999994
|
| >d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: PurP ATP-binding domain-like domain: 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP species: Methanocaldococcus jannaschii [TaxId: 2190]
Probab=97.99 E-value=2.2e-06 Score=86.62 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhh
Q psy10158 139 DRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLF 218 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lf 218 (1266)
||.+.-++|.++|||+|+.+-.- + .|..|+|+||.+|. .|.|+. +.
T Consensus 1 DK~~~k~~l~~~Gip~P~~~~~~--------------~--------~i~~PvVVKP~~g~-----------gs~Gv~-~v 46 (238)
T d2r7ka2 1 ERSLEGKLLREAGLRVPKKYESP--------------E--------DIDGTVIVKFPGAR-----------GGRGYF-IA 46 (238)
T ss_dssp CHHHHHHHHHHTTCCCCCEESSG--------------G--------GCCSCEEEECSCCC-----------C---EE-EE
T ss_pred CHHHHHHHHHHCCCCCcccccCH--------------h--------HCCCCEEEEECCCC-----------CCCCeE-Ee
Confidence 68888899999999999854221 1 13499999999997 366664 33
Q ss_pred cccCCccccccCC------c--ccccCcceEEeeccCCC-----------CceEEEEEECCceeEEeeccCCCCCCceee
Q psy10158 219 RKIGSRSSVYSPE------S--RVRKSGSFIYEDFMPTD-----------GTDVKVYTVGPDYAHAEARKSPALDGKVER 279 (1266)
Q Consensus 219 rKignkSS~y~p~------s--~vr~~gSyIYEEFI~t~-----------GtDVKVYtVGp~~vhAe~RKSPvvDG~VRR 279 (1266)
+ |+......- + ....+..++.||||+-. +..+.+.+++. |+.-.++|.++.
T Consensus 47 ~---~~~el~~a~~~~~~~~~~~~~~~~~v~vEe~i~G~e~~v~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~~~ 116 (238)
T d2r7ka2 47 S---STEEFYKKAEDLKKRGILTDEDIANAHIEEYVVGTNFCIHYFYSPLKDEVELLGMDK-------RYESNIDGLVRI 116 (238)
T ss_dssp S---SHHHHHHHHHHHHHTTSCCHHHHHHCEEEECCCSEEEEEEEEEETTTTEEEEEEEEE-------EEEEEHHHHTTS
T ss_pred C---CHHHHHHHHHHHHHHHhhccCCCCcEEEEEeecCceEEEEEeecccccceEEEeecc-------CCccEEEEEEEc
Confidence 3 322211100 0 01124678999999732 22333333322 221111222211
Q ss_pred c--------CCCCcee---eEeeC----CHHHHHHHHHHHHHh------C-CccceeeEEee-CCCeEEEeecC
Q psy10158 280 D--------SEGKEIR---YPVIL----SNAEKLISRKVCLAF------K-QTVCGFDLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 280 N--------~hgKEiR---ypV~L----T~eEK~IA~kaakAF------G-q~VCGfDLLRs-~ggsyVcDVNG 330 (1266)
. .+.+... -+..| .++=++++.++++++ | ..++++|++.. +|.+||+|||.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~i~~~l~~~~~~~~~G~~~ve~~~~~dg~~~viEinp 190 (238)
T d2r7ka2 117 PAKDQLEMNINPSYVITGNIPVVIRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVVFEMSA 190 (238)
T ss_dssp CHHHHHTCCCCCCEEEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEEEEEEES
T ss_pred CHHheeccCccccCccccccCccccHHHHHHHHHHHHHHHHHHHHhcccCccccccHhhHhhcCCCEEEEEEEC
Confidence 1 0111111 12234 445567889999998 4 46889999986 66799999996
|
| >d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Glycinamide ribonucleotide transformylase PurT, domain 2 species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=1.1e-06 Score=84.83 Aligned_cols=153 Identities=18% Similarity=0.245 Sum_probs=76.4
Q ss_pred HhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCcccc
Q psy10158 148 EKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSV 227 (1266)
Q Consensus 148 ~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~ 227 (1266)
++.|||+|++..+... .+..+.+. .+..|+|+||..|. -|.|+. +..+...-.+.
T Consensus 11 ~~~Gip~p~~~~v~s~---------~dl~~~~~----~ig~PvVvKP~~g~-----------gs~gv~-~v~~~~el~~a 65 (206)
T d1kjqa3 11 EELQLPTSTYRFADSE---------SLFREAVA----DIGYPCIVKPVMSS-----------SGKGQT-FIRSAEQLAQA 65 (206)
T ss_dssp TTSCCCBCCEEEESSH---------HHHHHHHH----HHCSSEEEEESCC--------------CCCE-EECSGGGHHHH
T ss_pred HHCCCCCCCCeEECCH---------HHHHHHHH----HhCCCEEEeeccCC-----------ccCCce-EEcCHHHHHHH
Confidence 4789999999999641 11122222 23499999999997 255553 22222111111
Q ss_pred ccCCc--ccccCcceEEeeccCCCC-ceEEEEEECCceeE--EeeccCCCCCCceeecCCCCceeeEeeCCHHHHHHHHH
Q psy10158 228 YSPES--RVRKSGSFIYEDFMPTDG-TDVKVYTVGPDYAH--AEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRK 302 (1266)
Q Consensus 228 y~p~s--~vr~~gSyIYEEFI~t~G-tDVKVYtVGp~~vh--Ae~RKSPvvDG~VRRN~hgKEiRypV~LT~eEK~IA~k 302 (1266)
+.-.. ..-....++.|+|+.-.. -.+-+...+...+. ...++.+ .+.+....... ..+..+..+-++++.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 141 (206)
T d1kjqa3 66 WKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQE--DGDYRESWQPQ--QMSPLALERAQEIARK 141 (206)
T ss_dssp HHHHHHHSGGGCCCEEEEECCCCSEEEEEEEEEETTEEEECCCEEEEEE--TTEEEEEEECC--CCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcccCcceeeeeeccccceeeeeeeeecCCCceeeccceeeec--cCccceeeccc--cCCHHHHHHHHHHHHh
Confidence 11000 111245566666665432 22222222221111 1111111 22121111110 0111222346677888
Q ss_pred HHHHhCCc-cceeeEEeeCCCeEEEeec
Q psy10158 303 VCLAFKQT-VCGFDLLRANGKSFVCDVN 329 (1266)
Q Consensus 303 aakAFGq~-VCGfDLLRs~ggsyVcDVN 329 (1266)
+..+++.. +.++|+...++++||+|||
T Consensus 142 ~~~~~~~~g~~~~e~~~~~~~~~viEin 169 (206)
T d1kjqa3 142 VVLALGGYGLFGVELFVCGDEVIFSEVS 169 (206)
T ss_dssp HHHHHCSSEEEEEEEEEETTEEEEEEEE
T ss_pred hhhhhhceeeeccccccccCCceEEEee
Confidence 88888876 5679999999999999999
|
| >d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 species: Escherichia coli [TaxId: 562]
Probab=97.90 E-value=1.2e-05 Score=82.27 Aligned_cols=166 Identities=16% Similarity=0.151 Sum_probs=87.8
Q ss_pred HHHHHHHHHhcCCCCCCeEEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchhhhhc
Q psy10158 140 RRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFR 219 (1266)
Q Consensus 140 Rr~vlqiL~~~gIp~P~tv~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~Lfr 219 (1266)
|.-+=++|.++|||+|++..++.. .+..+++.- +..|+|+||..+. .|.|+. +.+
T Consensus 2 K~f~K~~~~~~~IPt~~~~~~~~~---------~ea~~~~~~----~~~P~VvK~~~~~-----------~gkGv~-i~~ 56 (224)
T d1gsoa3 2 KAFTKDFLARHKIPTAEYQNFTEV---------EPALAYLRE----KGAPIVIKADGLA-----------AGKGVI-VAM 56 (224)
T ss_dssp HHHHHHHHHHTTCCBCCEEEESSS---------SHHHHHHHH----HCSSEEEEC-----------------CCEE-EES
T ss_pred HHHHHHHHHHcCCCCCCceEeCCH---------HHHHHHHHH----cCCCEEEEeCCcc-----------ccccee-eeh
Confidence 334557899999999999888641 112233322 3489999998876 577873 444
Q ss_pred ccCCccccccCC----cccccCcceEEeeccCCCCceEEEEEECCceeEEeeccC--CCCCCceeecCCCCceeeEee--
Q psy10158 220 KIGSRSSVYSPE----SRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKS--PALDGKVERDSEGKEIRYPVI-- 291 (1266)
Q Consensus 220 KignkSS~y~p~----s~vr~~gSyIYEEFI~t~GtDVKVYtVGp~~vhAe~RKS--PvvDG~VRRN~hgKEiRypV~-- 291 (1266)
........+.-- .....+..+|.||||.-.--.+=+++=|.++++...=+- .+.||..-.|+-|=+.-.|..
T Consensus 57 ~~~e~~~a~~~~~~~~~~~~~~~~vliEefl~G~E~s~~~i~dg~~~~~~~~~~d~kr~~d~~~gp~tggmg~~~P~p~~ 136 (224)
T d1gsoa3 57 TLEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVV 136 (224)
T ss_dssp SHHHHHHHHTTTTCSCCTTCTTCCEEEEECCCEEEEEEEEEEESSCEEEEEEEEEEEEEETTTEEEEEEEEEEEESCTTC
T ss_pred hHHHHHHHHHHHHhcccccccCceEEeecccccccceeEEEeccCceEeeecccccccccccccccccccccccCCCchh
Confidence 322111111100 011235679999999631233334444777665542110 012566656654433333442
Q ss_pred ---CCHHH-HHH---HHHHHHHhCCcccee---eEEee-CCCeEEEeecC
Q psy10158 292 ---LSNAE-KLI---SRKVCLAFKQTVCGF---DLLRA-NGKSFVCDVNG 330 (1266)
Q Consensus 292 ---LT~eE-K~I---A~kaakAFGq~VCGf---DLLRs-~ggsyVcDVNG 330 (1266)
|..+. +.| +.++.++.|....|+ +++-. +|.|||+|+|-
T Consensus 137 ~~~l~~~~~~~i~~~~~~~~~~~g~~~~G~l~~~~mit~~G~p~vlE~N~ 186 (224)
T d1gsoa3 137 TDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNC 186 (224)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTCCEEEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCceeeeeeccceeeeeCCCEEEEEEec
Confidence 22221 222 355577778777674 77666 45699999994
|
| >d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Biotin carboxylase (BC), domain 2 species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=4.6e-06 Score=83.78 Aligned_cols=164 Identities=15% Similarity=0.214 Sum_probs=88.0
Q ss_pred HHHHHHHHHHhcCCC-CCCe--EEeccCCCCCccccccccCCeEEEcCeEecCCEEEecccccCcceEEEeccCCCCchh
Q psy10158 139 DRRKVYALLEKEGIE-IPRY--AVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQ 215 (1266)
Q Consensus 139 DRr~vlqiL~~~gIp-~P~t--v~~~rd~~~~~~~~l~e~~D~I~v~G~~~~kPfVeKpv~GedHNI~IYyp~s~GgGv~ 215 (1266)
||..+-++|+++||| +|-+ .+++. +.+...... .|..|+|+||..|. .|.|+.
T Consensus 1 dK~~~~~~~~~~GvP~vp~~~~~~~~s---------~dea~~~a~----~iG~PvivKp~~~~-----------ggrGv~ 56 (216)
T d2j9ga3 1 DKVSAIAAMKKAGVPCVPGSDGPLGDD---------MDKNRAIAK----RIGYPVIIKASGGG-----------GGRGMR 56 (216)
T ss_dssp SHHHHHHHHHHHTCCBCCBCSSCCCSC---------HHHHHHHHH----HHCSSEEEEEEEEE-----------TTEEEE
T ss_pred CHHHHHHHHHHcCcCCCCCCCCCCCCC---------HHHHHHHHH----HcCCCEEEeccccc-----------CCceeE
Confidence 677888999999999 5743 22221 111111221 23499999999986 355664
Q ss_pred hhhcccCCccccccC----CcccccCcceEEeeccCCCC-ceEEEEEECCce-eEEeeccCCCCCCceeecC-CCCceee
Q psy10158 216 RLFRKIGSRSSVYSP----ESRVRKSGSFIYEDFMPTDG-TDVKVYTVGPDY-AHAEARKSPALDGKVERDS-EGKEIRY 288 (1266)
Q Consensus 216 ~LfrKignkSS~y~p----~s~vr~~gSyIYEEFI~t~G-tDVKVYtVGp~~-vhAe~RKSPvvDG~VRRN~-hgKEiRy 288 (1266)
+.+....-...|.- ......++..|+|+||.-.- ..+-+..-|... ++-..|.-+ ..... +..+..-
T Consensus 57 -~v~~~~el~~a~~~~~~ea~~~~~~~~vlvE~~i~g~~~~~~~i~~dg~~~~~~~~~~~~~-----~~~~~~~~~~~~P 130 (216)
T d2j9ga3 57 -VVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCS-----MQRRHQKVVEEAP 130 (216)
T ss_dssp -EECSHHHHHHHHHHHHHHTC--CCCCCEEEEECCSSCEEEEEEEEEESSSCEEEEEEEEEE-----EEETTEEEEEEES
T ss_pred -eecchhHHHHHHHHHHHHHHHhcCCCceEeeeeecCcccceeEEEEcCCCCeeeccccccC-----cccccCCeEEecc
Confidence 33322211111110 01223577899999997422 333333333222 212112211 11111 1112222
Q ss_pred EeeCCHH----HHHHHHHHHHHhC-CccceeeEEeeCCCeEEEeecCce
Q psy10158 289 PVILSNA----EKLISRKVCLAFK-QTVCGFDLLRANGKSFVCDVNGFS 332 (1266)
Q Consensus 289 pV~LT~e----EK~IA~kaakAFG-q~VCGfDLLRs~ggsyVcDVNGwS 332 (1266)
.-.++++ -+.+|.+++.++| ..++++|++-.++++||+|||.=-
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~e~~~~~~~~~viEvnpR~ 179 (216)
T d2j9ga3 131 APGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRI 179 (216)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEECSC
T ss_pred CccccchhhhhhHHHHHHHHHHcCccCcceeEeEecCCeEEEEeecCcc
Confidence 2234554 3455777777776 567889999999999999999753
|
| >d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: BC ATP-binding domain-like domain: Acetyl-CoA carboxylase, BC-M subdomain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.40 E-value=8.7e-05 Score=76.51 Aligned_cols=130 Identities=11% Similarity=0.069 Sum_probs=69.0
Q ss_pred ecCCEEEecccccCcceEEEeccCCCCchhhhhcccCCccccccCCcccccCcceEEeeccCCCC-ceEEEEEECC-cee
Q psy10158 186 FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDG-TDVKVYTVGP-DYA 263 (1266)
Q Consensus 186 ~~kPfVeKpv~GedHNI~IYyp~s~GgGv~~LfrKignkSS~y~p~s~vr~~gSyIYEEFI~t~G-tDVKVYtVGp-~~v 263 (1266)
|..|+|+||.+|. .|.|+. +.+....-...|.-....-.+...|+||||.-.. ..+-+..-|. ..+
T Consensus 62 igfPvvVKP~~~~-----------gs~Gv~-iv~~~~el~~a~~~a~~~s~~~~vlVEe~I~G~~~~~~~~~~~~~~~~v 129 (267)
T d1w96a3 62 IGFPVMIKASEGG-----------GGKGIR-QVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQYGTNI 129 (267)
T ss_dssp HCSSEEEEETTCC-----------TTTTEE-EECSHHHHHHHHHHHHHHSTTCCEEEEECCCSCEEEEEEEEECTTSCEE
T ss_pred cCCCEEEEeeccc-----------CCeeEE-eecccchhhhhhhhhhhhcccchhhhhhhccchhhhhhhheeccCccee
Confidence 5699999999986 466764 3332111111111001112367789999996321 2333332222 122
Q ss_pred EEeeccCCCCCCceeecCCCCceeeEeeCCHH----HHHHHHHHHHHhCCc-cceeeEEee--CCCeEEEeecCc
Q psy10158 264 HAEARKSPALDGKVERDSEGKEIRYPVILSNA----EKLISRKVCLAFKQT-VCGFDLLRA--NGKSFVCDVNGF 331 (1266)
Q Consensus 264 hAe~RKSPvvDG~VRRN~hgKEiRypV~LT~e----EK~IA~kaakAFGq~-VCGfDLLRs--~ggsyVcDVNGw 331 (1266)
+.-.+... ..++.........+..|..+ -.++|.++++++|.. .+.+|++.. +|+.||+|||-=
T Consensus 130 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~lg~~g~~~vd~~~~~~~g~~yviEiNpR 200 (267)
T d1w96a3 130 SLFGRDCS----VQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYFLELNPR 200 (267)
T ss_dssp EEEEEEEE----EEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTTTCCEEEEEEECS
T ss_pred eecccccc----cccccccccceeecccCchHHHHHHHHHHHHHHHHhCCccccceeeeeeCCCCcEEEEEeccc
Confidence 22222210 01111111223334456654 345688999999976 456899986 578999999953
|
| >d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR) {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Broad specificity phosphatase PhoE (YhfR) species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.07 E-value=0.0026 Score=61.94 Aligned_cols=43 Identities=35% Similarity=0.431 Sum_probs=36.5
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKG 586 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkg 586 (1266)
.||..|+.||+.+|+.|+.+. --+||||+-.|++.||+.+++.
T Consensus 27 ~Lt~~G~~QA~~~~~~l~~~~-------------------~~~i~sSpl~Ra~qTa~~i~~~ 69 (207)
T d1h2ea_ 27 PLTEKGRQDAMRLGKRLEAVE-------------------LAAIYTSTSGRALETAEIVRGG 69 (207)
T ss_dssp CBCHHHHHHHHHHHHHTTTSC-------------------CSEEEECSSHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHhhhhccc-------------------cceeecCccHHHHHHHhhhccc
Confidence 599999999999999998311 1159999999999999999865
|
| >d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Escherichia coli [TaxId: 562]
Probab=95.11 E-value=0.013 Score=59.28 Aligned_cols=46 Identities=24% Similarity=0.266 Sum_probs=37.0
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||+.|+.||+.+|+.++. .++ .=| .||||+=+|++.||++..+..
T Consensus 28 pLTe~G~~QA~~~~~~L~~---------~~~-------~~d-~i~sS~L~Ra~~Ta~~i~~~~ 73 (247)
T d1e58a_ 28 DLSEKGVSEAKAAGKLLKE---------EGY-------SFD-FAYTSVLKRAIHTLWNVLDEL 73 (247)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------TTC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC-------Ccc-cchhhHHHHHHHHHHHHHhhc
Confidence 6999999999999999994 111 112 699999999999999875543
|
| >d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.94 E-value=0.015 Score=57.92 Aligned_cols=50 Identities=22% Similarity=0.333 Sum_probs=39.8
Q ss_pred ecCC----ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 521 KWGG----ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 521 KWGG----ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
+++| .||..|+.||+.||+.++. .++ .-| .||+|+-.|++.||+..+...
T Consensus 19 r~~G~~D~~LTe~G~~QA~~lg~~L~~---------~~~-------~~d-~~~~S~l~Ra~~Ta~~~~~~~ 72 (248)
T d2hhja1 19 RFCSWVDQKLNSEGMEEARNCGKQLKA---------LNF-------EFD-LVFTSVLNRSIHTAWLILEEL 72 (248)
T ss_dssp BCCTTSCCCBCHHHHHHHHHHHHHHHH---------TTC-------CCS-EEEECSSHHHHHHHHHHHHHH
T ss_pred CccCCCCCccCHHHHHHHHHHHHHHHh---------cCC-------Ccc-chhhHHhhhhhHHHHHhhhhc
Confidence 3567 6999999999999999984 111 112 599999999999999987654
|
| >d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.58 E-value=0.02 Score=57.09 Aligned_cols=46 Identities=22% Similarity=0.129 Sum_probs=37.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.|+. .+ + ..-.||||+=+|++.||+......
T Consensus 29 ~LTe~G~~QA~~l~~~L~~---------~~-------~-~~~~~~sS~l~Ra~~Ta~~i~~~~ 74 (243)
T d1riia_ 29 GLTDKGQAEAVRSGELIAE---------HD-------L-LPDVLYTSLLRRAITTAHLALDSA 74 (243)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------TT-------C-CCSEEEECSCHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHHh---------cC-------C-CceEEEeccchhhhHHHHhhhhhh
Confidence 7999999999999999984 11 1 134699999999999998875543
|
| >d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=94.36 E-value=0.021 Score=55.74 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=38.1
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGL 587 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkgl 587 (1266)
.||..|+.||+.||+.++. .+ .. --.||+|+=.|++.||++++..+
T Consensus 33 ~Lt~~G~~QA~~l~~~l~~---------~~-------~~-~~~i~~Spl~R~~~Ta~~i~~~~ 78 (211)
T d1fzta_ 33 ALSETGIKEAKLGGERLKS---------RG-------YK-FDIAFTSALQRAQKTCQIILEEV 78 (211)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------HT-------CC-CSEEEEESSHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhhhh---------hC-------Cc-cccccchhhhhhhHHHHHHHhhc
Confidence 5999999999999999984 11 11 23699999999999999998765
|
| >d1bifa2 c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain domain: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.00 E-value=0.016 Score=57.46 Aligned_cols=42 Identities=31% Similarity=0.462 Sum_probs=34.2
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaF 583 (1266)
.||..|+.||+.||+.|+. .++ +--+||||+=.|++.||+++
T Consensus 23 ~LT~~G~~QA~~l~~~l~~---------~~i--------~~d~i~sSpl~Ra~qTA~~i 64 (219)
T d1bifa2 23 GLSPRGREFSKHLAQFISD---------QNI--------KDLKVFTSQMKRTIQTAEAL 64 (219)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------HTC--------TTCEEEECSSHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC--------CcceeecccccchHHHHHhh
Confidence 4999999999999999984 111 12369999999999999875
|
| >d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.52 E-value=0.045 Score=54.34 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=38.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhh
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLL 588 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL 588 (1266)
.||..|+.||+.||+.|+. .++ .--.||+|+-.|++-||+..++.+-
T Consensus 26 ~LTe~G~~QA~~lg~~L~~---------~~~--------~~d~~~~S~l~R~~qTa~~i~~~~~ 72 (240)
T d1qhfa_ 26 KLSAKGQQEAARAGELLKE---------KKV--------YPDVLYTSKLSRAIQTANIALEKAD 72 (240)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------TTC--------CCSEEEECSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHHHh---------cCC--------CceEEEeHHhHHHHHHHHHHHHHhc
Confidence 5999999999999999984 111 1346999999999999999877664
|
| >d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Plasmodium falciparum [TaxId: 5833]
Probab=91.88 E-value=0.099 Score=51.80 Aligned_cols=48 Identities=21% Similarity=0.097 Sum_probs=38.7
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHHHHHhhc
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLA 589 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaFAkglL~ 589 (1266)
.||..|+.||+.+|+.++. .++ +--.||+|+=.|++.||++....+-.
T Consensus 29 pLt~~G~~QA~~~g~~L~~---------~~~--------~~~~v~~S~l~R~~~ta~~~~~~~~~ 76 (241)
T d1xq9a_ 29 PLSEKGEEEAIAAGKYLKE---------KNF--------KFDVVYTSVLKRAICTAWNVLKTADL 76 (241)
T ss_dssp CBCHHHHHHHHHHHHHHHH---------HTC--------CCSEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHh---------ccc--------cceeeeeccchhhhHHHHhhhhhhcc
Confidence 6999999999999999984 111 23459999999999999998665544
|
| >d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Alpha-ribazole-5'-phosphate phosphatase species: Thermus thermophilus [TaxId: 274]
Probab=90.39 E-value=0.063 Score=51.58 Aligned_cols=37 Identities=32% Similarity=0.330 Sum_probs=31.6
Q ss_pred ccChhHHHHHHHHHHHHHhccCCCCCCCccchhhcccccccceEEecCchhHHHHHHHH
Q psy10158 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583 (1266)
Q Consensus 525 ElThaGR~QAeeLG~~fR~mYPggq~~~~gLLRLhst~rhDlKIYSSdEgRVq~TAaaF 583 (1266)
.||..|+.||+.+|+.+. +.+||||+=.|++.||++.
T Consensus 26 ~Lt~~G~~qa~~~~~~l~----------------------~~~i~sSpl~Ra~~TA~~~ 62 (171)
T d1v37a_ 26 PLTAEGEAQARRLKGALP----------------------SLPAFSSDLLRARRTAELA 62 (171)
T ss_dssp CCCHHHHHHHHHHTTTSC----------------------SCCEEECSSHHHHHHHHHT
T ss_pred CCChHHHHHHHHhhhhcc----------------------cccccccchhhhHHHHHhh
Confidence 599999999999987554 3469999999999999864
|
| >d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: Lysine biosynthesis enzyme LysX, N-terminal domain domain: Lysine biosynthesis enzyme LysX, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=84.73 E-value=0.4 Score=42.10 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=50.8
Q ss_pred HHHHHHHhhcC-cEEEEEecccccc--cccccccccceeeccccCCCcHHHHHHHHhhcCCccccCccchhhhhH
Q psy10158 68 KEILTRLEEFE-FIKMIVFSEETIQ--KPVDEWPIVDCLISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQD 139 (1266)
Q Consensus 68 r~IL~RL~~~g-~f~viiF~dkvIL--e~vE~WP~cD~LIsFfS~GfPL~KAi~Y~klrkp~~lNdl~~Q~ilrD 139 (1266)
|.|++-+.+.| +.+++=-.+-.+. .+--..+.+|++|++...++--..++++++..+.+++|+..+..+..|
T Consensus 14 k~L~~a~~~rG~~~~~id~~~~~~~l~~~~~~~~~~D~Vi~R~~s~~~~~~v~~~lE~~Gv~v~Ns~~aI~~c~D 88 (88)
T d1uc8a1 14 RMLFERAEALGLPYKKVYVPALPMVLGERPKELEGVTVALERCVSQSRGLAAARYLTALGIPVVNRPEVIEACGD 88 (88)
T ss_dssp HHHHHHHHHHTCCEEEEEGGGCCEETTBCCGGGTTCCEEEECCSSHHHHHHHHHHHHHTTCCEESCHHHHHHHHB
T ss_pred HHHHHHHHHCCCeEEEEehhhcEEEccCCCCccCCCCEEEEeccccchHHHHHHHHHHCCCcEeccHHHHHhhCC
Confidence 45777777776 4443333332222 332234578999999988887799999999999999999988766543
|