Psyllid ID: psy10166

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100----
Protein Sequence
MGALRRQDCDFHIVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRKHQITYLAFQGDNEWTERTVVCLKWS
Secondary Structure (PSIPRED)
cccccccccHHHHHHcHHHHHHcccccccccccEEEEcccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHcccHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccHHHHHHHHHHccccccccccccccccccHHHcHHHHHHHHHHHHccccccEEEEEEcc
Coil and Loop (DISEMBL)
mgalrrqdcdfhIVSMSHELRKlggrkrkgedlivkdvdgnslvsdsQQWLTKQLStettyrpshnskhdgptsqqkrkHQITYLAfqgdnewteRTVVCLKWS
Flexible Loop (DISEMBL)
mgalrrqdcdfhivsmshelrklggrkrkgedlivkdvdgnslvsdsqqWLTKQLStettyrpshnskhdgptsqqkrKHQITYLafqgdnewtertvvclkws
Low Complexity Region (SEG)
MGALRRQDCDFHIVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRKHQITYLAFQGDNEWTERTVVCLKWS
Disordered region (IsUnstruct)
*********DFHIV*******************I**********************************************QITYLAFQGDNEWTERTVVCLKW*
Disordered Region (DISOPRED)
*********DFHIVS*******************VKDVDGNSLV*************************************ITYLAFQGDNEWTERTVVCLKW*
Disordered Region (DISEMBL)
********CDFHIVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVS***********************************QITYLAFQGDNEWTERTVVCLKWS
Disordered Region (DISPRO)
****RRQDCDFHIVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVSDSQQWLTKQLST*******************KRKHQITYLAFQGDNEWTERTVVCLKWS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGALRRQDCDFHIVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRKHQITYLAFQGDNEWTERTVVCLKWS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	104	2.2.26 [Sep-21-2011]
Q92733	491	Proline-rich protein PRCC	yes	N/A	0.730	0.154	0.369	8e-10

>sp|Q92733|PRCC_HUMAN Proline-rich protein PRCC OS=Homo sapiens GN=PRCC PE=1 SV=1

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 394 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 453

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 454 KHQITYLIHQAKERELELKNTWSE 477

May regulate cell cycle progression through interaction with MAD2L2.
Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
118102068	512	PREDICTED: proline-rich protein PRCC iso	0.730	0.148	0.404	4e-09
354481518	489	PREDICTED: proline-rich protein PRCC-lik	0.730	0.155	0.369	1e-08
183986455	580	prcc protein [Xenopus (Silurana) tropica	0.730	0.131	0.380	1e-08
15809012	491	papillary renal cell carcinoma transloca	0.730	0.154	0.369	1e-08
198442823	489	proline-rich protein PRCC [Rattus norveg	0.730	0.155	0.369	2e-08
296229220	492	PREDICTED: proline-rich protein PRCC iso	0.730	0.154	0.369	2e-08
355558578	491	hypothetical protein EGK_01434 [Macaca m	0.730	0.154	0.369	2e-08
194035971	491	PREDICTED: proline-rich protein PRCC iso	0.730	0.154	0.369	2e-08
403293819	491	PREDICTED: proline-rich protein PRCC [Sa	0.730	0.154	0.369	2e-08
73960882	489	PREDICTED: proline-rich protein PRCC iso	0.730	0.155	0.369	3e-08

>gi|118102068|ref|XP_423657.2| PREDICTED: proline-rich protein PRCC isoform 2 [Gallus gallus]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   D+ G+  +S +QQWLTK L+ E T +     K D PT QQ+R
Sbjct: 415 FKRLQGKRNRGREEINFVDIKGDDQLSGAQQWLTKSLTEEKTMKSFSKKKGDQPTGQQRR 474

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 475 KHQITYLIHQAKERELELKNTWSE 498

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354481518|ref|XP_003502948.1| PREDICTED: proline-rich protein PRCC-like [Cricetulus griseus] gi|344250935|gb|EGW07039.1| Proline-rich protein PRCC [Cricetulus griseus]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 392 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 451

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 452 KHQITYLIHQAKERELELKNTWSE 475

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|183986455|gb|AAI66202.1| prcc protein [Xenopus (Silurana) tropicalis]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   D+ G+  +S +QQWLTK L+ E T +     K + PT QQ+R
Sbjct: 483 FKRLQGKRNRGREEINFVDIKGDDQLSGNQQWLTKSLTEEKTMKSFSKRKGEQPTGQQRR 542

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W++
Sbjct: 543 KHQITYLIHQAKERELELKNSWSD 566

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|15809012|ref|NP_291051.1| papillary renal cell carcinoma translocation-associated gene product [Mus musculus] gi|11527239|gb|AAG36941.1|AF273750_1 papillary renal cell carcinoma-associated protein [Mus musculus] gi|26347207|dbj|BAC37252.1| unnamed protein product [Mus musculus] gi|30354398|gb|AAH52072.1| Papillary renal cell carcinoma (translocation-associated) [Mus musculus] gi|52350665|gb|AAH82784.1| Papillary renal cell carcinoma (translocation-associated) [Mus musculus] gi|148683396|gb|EDL15343.1| papillary renal cell carcinoma (translocation-associated) [Mus musculus]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 394 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 453

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 454 KHQITYLIHQAKERELELKNTWSE 477

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198442823|ref|NP_001101170.1| proline-rich protein PRCC [Rattus norvegicus] gi|149048190|gb|EDM00766.1| papillary renal cell carcinoma (translocation-associated) (predicted) [Rattus norvegicus] gi|187469590|gb|AAI66708.1| Prcc protein [Rattus norvegicus]

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 392 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 451

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 452 KHQITYLIHQAKERELELKNTWSE 475

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|296229220|ref|XP_002760162.1| PREDICTED: proline-rich protein PRCC isoform 1 [Callithrix jacchus]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 395 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 454

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 455 KHQITYLIHQAKERELELKNTWSE 478

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355558578|gb|EHH15358.1| hypothetical protein EGK_01434 [Macaca mulatta]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 394 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 453

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 454 KHQITYLIHQAKERELELKNTWSE 477

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194035971|ref|XP_001924378.1| PREDICTED: proline-rich protein PRCC isoform 1 [Sus scrofa]

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 394 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 453

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 454 KHQITYLIHQAKERELELKNTWSE 477

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403293819|ref|XP_003937908.1| PREDICTED: proline-rich protein PRCC [Saimiri boliviensis boliviensis]

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 394 FKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 453

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 454 KHQITYLIHQAKERELELKNTWSE 477

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|73960882|ref|XP_851627.1| PREDICTED: proline-rich protein PRCC isoform 1 [Canis lupus familiaris]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)

Query: 20  LRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKR 78
            ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+R
Sbjct: 392 FKRLQGKRNRGREEVNFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRR 451

Query: 79  KHQITYLAFQG-------DNEWTE 95
           KHQITYL  Q         N W+E
Sbjct: 452 KHQITYLIHQAKERELELKNTWSE 475

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
UNIPROTKB|H0YE12	198	PRCC "Proline-rich protein PRC	0.759	0.398	0.362	4.5e-11
UNIPROTKB|H9KZY8	512	PRCC "Uncharacterized protein"	0.653	0.132	0.449	1.2e-10
UNIPROTKB|H0Y679	257	PRCC "Proline-rich protein PRC	0.653	0.264	0.405	2.6e-10
UNIPROTKB|A6NG79	459	PRCC "Proline-rich protein PRC	0.759	0.172	0.362	3.4e-10
RGD|1309037	488	Prcc "papillary renal cell car	0.653	0.139	0.405	1.3e-09
UNIPROTKB|Q92733	491	PRCC "Proline-rich protein PRC	0.653	0.138	0.405	1.3e-09
UNIPROTKB|F1RHJ3	491	PRCC "Uncharacterized protein"	0.653	0.138	0.405	1.3e-09
UNIPROTKB|Q1RML0	492	PRCC "Papillary renal cell car	0.653	0.138	0.405	1.3e-09

UNIPROTKB|H0YE12 PRCC "Proline-rich protein PRCC" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query:    10 DFHIVSMSHELRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSK 68
             D +     ++ ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K
Sbjct:    91 DANAAGAYYQFKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKK 150

Query:    69 HDGPTSQQKRKHQITYLAFQ 88
              + PT QQ+RKHQITYL  Q
Sbjct:   151 GEQPTGQQRRKHQITYLIHQ 170

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|H9KZY8 PRCC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 158 (60.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 31/69 (44%), Positives = 45/69 (65%)

Query:    21 RKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRK 79
             ++L G++ +G E++   D+ G+  +S +QQWLTK L+ E T +     K D PT QQ+RK
Sbjct:   416 KRLQGKRNRGREEINFVDIKGDDQLSGAQQWLTKSLTEEKTMKSFSKKKGDQPTGQQRRK 475

Query:    80 HQITYLAFQ 88
             HQITYL  Q
Sbjct:   476 HQITYLIHQ 484

GO:0005634 "nucleus" evidence=IEA

GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA

UNIPROTKB|H0Y679 PRCC "Proline-rich protein PRCC" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query:    21 RKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRK 79
             ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+RK
Sbjct:   161 KRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRK 220

Query:    80 HQITYLAFQ 88
             HQITYL  Q
Sbjct:   221 HQITYLIHQ 229

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|A6NG79 PRCC "Proline-rich protein PRCC" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query:    10 DFHIVSMSHELRKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSK 68
             D +     ++ ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K
Sbjct:   352 DANAAGAYYQFKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKK 411

Query:    69 HDGPTSQQKRKHQITYLAFQ 88
              + PT QQ+RKHQITYL  Q
Sbjct:   412 GEQPTGQQRRKHQITYLIHQ 431

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

RGD|1309037 Prcc "papillary renal cell carcinoma (translocation-associated)" [Rattus norvegicus (taxid:10116)]

 Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query:    21 RKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRK 79
             ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+RK
Sbjct:   392 KRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRK 451

Query:    80 HQITYLAFQ 88
             HQITYL  Q
Sbjct:   452 HQITYLIHQ 460

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q92733 PRCC "Proline-rich protein PRCC" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query:    21 RKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRK 79
             ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+RK
Sbjct:   395 KRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRK 454

Query:    80 HQITYLAFQ 88
             HQITYL  Q
Sbjct:   455 HQITYLIHQ 463

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0007093 "mitotic cell cycle checkpoint" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F1RHJ3 PRCC "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query:    21 RKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRK 79
             ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+RK
Sbjct:   395 KRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRK 454

Query:    80 HQITYLAFQ 88
             HQITYL  Q
Sbjct:   455 HQITYLIHQ 463

GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q1RML0 PRCC "Papillary renal cell carcinoma (Translocation-associated)" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query:    21 RKLGGRKRKG-EDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRK 79
             ++L G++ +G E++   ++ G+  +S +QQW+TK L+ E T +     K + PT QQ+RK
Sbjct:   396 KRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRK 455

Query:    80 HQITYLAFQ 88
             HQITYL  Q
Sbjct:   456 HQITYLIHQ 464


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      104       104   0.00091  102 3  11 22  0.44    30
                                                     29  0.50    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  141 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.28u 0.10s 13.38t   Elapsed:  00:00:04
  Total cpu time:  13.28u 0.10s 13.38t   Elapsed:  00:00:04
  Start:  Thu Aug 15 10:58:54 2013   End:  Thu Aug 15 10:58:58 2013

GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	104
PF10253	182	PRCC: Mitotic checkpoint regulator, MAD2B-interact	99.85
KOG3903|consensus	410		99.84

>PF10253 PRCC: Mitotic checkpoint regulator, MAD2B-interacting; InterPro: IPR018800 This is the highly conserved C-terminal domain of the renal papillary carcinoma protein PRCC

Probab=99.85  E-value=4.6e-22  Score=146.18  Aligned_cols=87  Identities=25%  Similarity=0.449  Sum_probs=80.4

Q ss_pred             ccChHHHHHhhcCCCCCCccceEEecCCCCccchHHHHHHHhhcccccccCCCCCCCCCCChhhhhhhhhHHHHhhh---
Q psy10166         13 IVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRKHQITYLAFQG---   89 (104)
Q Consensus        13 ~iddea~~rL~Gkr~R~~eei~iIdV~~dd~l~~~~qwl~K~Ltee~~~~p~s~~~~~~Ps~~~KRKHQITYLA~qA---   89 (104)
                      .++..++.+|.|+++++  +++||||++|+++++.++|+.+.++++..+++.+.. +..|+..+||||||||||++|   
T Consensus        82 ~~~~~~~r~l~~r~~~~--~~~iie~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~krKHQit~L~~~A~~~  158 (182)
T PF10253_consen   82 NLSAAARRKLFGRGGRG--NIKIIEFNADDEYASNEEWLAKALTEEAAAQQESSH-NPVPSIAQKRKHQITYLAHQAKEN  158 (182)
T ss_pred             hcCHHHHHHHhcccccC--ccceEEecHHHhccchHHHHHhhhhhhhhccccccc-CCCcccccCCcchHHHHHHHHHHH
Confidence            88999999999987666  999999999999999999999999999999997664 778888899999999999999   


Q ss_pred             ----hhhHhHhhhhhhc
Q psy10166         90 ----DNEWTERTVVCLK  102 (104)
Q Consensus        90 ----kn~Wa~nr~tRR~  102 (104)
                          +++||.||++||+
T Consensus       159 e~eL~e~~a~~r~~kr~  175 (182)
T PF10253_consen  159 EEELEERWAQGRKNKRE  175 (182)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence                7899999999996

The function of this domain is not known.

>KOG3903|consensus

Probab=99.84  E-value=1e-21  Score=162.88  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=71.4

Q ss_pred             cccCcccccChHHHHHhhcCCCCCCccceEEecCCCCccchHHHHHHHhhcccccccCCCCCCCCCCChhhhhhhhhHHH
Q psy10166          6 RQDCDFHIVSMSHELRKLGGRKRKGEDLIVKDVDGNSLVSDSQQWLTKQLSTETTYRPSHNSKHDGPTSQQKRKHQITYL   85 (104)
Q Consensus         6 ~~~~d~~~iddea~~rL~Gkr~R~~eei~iIdV~~dd~l~~~~qwl~K~Ltee~~~~p~s~~~~~~Ps~~~KRKHQITYL   85 (104)
                      +..-++++|.|+.+.||+|.    +.+|+||+|.|      .++||...|++.++++++|+        ++|||||||||
T Consensus       318 ~iae~m~~Ivdvn~drl~~~----r~e~n~vki~G------~~~wm~~~la~s~t~q~~sk--------l~RRKHQITYL  379 (410)
T KOG3903|consen  318 RIAEQMPEIVDVNQDRLMKN----RPEVNQVKITG------IAFWMAYQLATSSTKQKVSK--------LHRRKHQITYL  379 (410)
T ss_pred             hcchhhhHHHhHHHHHHhcc----cccccchhhhh------HHHHhhhcccccccccchhh--------hhhhhHHHHHH
Confidence            33458899999999999997    47999999998      79999999999999999865        35999999999


Q ss_pred             Hhhh-------hhhHhHhhhhhhc
Q psy10166         86 AFQG-------DNEWTERTVVCLK  102 (104)
Q Consensus        86 A~qA-------kn~Wa~nr~tRR~  102 (104)
                      ||+|       |++||+||+|||+
T Consensus       380 ah~Ak~rE~ELk~~WS~nkltkR~  403 (410)
T KOG3903|consen  380 AHDAKHRESELKERWSRNKLTKRE  403 (410)
T ss_pred             HHHHHHhHHHHHHHHhhhhHHHHH
Confidence            9999       8999999999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00