Psyllid ID: psy10210

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-----
Protein Sequence
MADFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLPW
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEEcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEccccccHHHHHHHHcccEEEEEEccccccccHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHcccEEEcccccccHHHHcHHccccccccccccccccEEEcccccccccccccEEEEEEcccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccccccHHHHHHHHHHHHHcccccccccccccEEEEccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEcHHHHHHHHHHHHHcccEEEEEEcccccEEcHHHHHHHHcccEEEEEEEcccccccccccHHHHHHHHHHccccEEEccccHHHHHHHHHHcccccccccEEcccEEEEEEccccccccccccEEEEEEccHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MADFLANLLHNLKISinsqfvnkepwQIVAMTTASVLTTVYVYESlfsrdpfdtdsltgKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYflelpsqgrnRLEILELVSNYLArghydwkhgrvsGAVYYYQQDLVDLLTEVFgltsytnplhpdifpgvCKMEAEVIKMCARmfnggpetcgcmtsggtESIMMACKAYRDYAReekgislpeivlpttahpafdkaanyfgmkvkhirltssYTVDLAALQSAITGNTVMLvgsmpnfpygtmddIGAIAKLgekygipvhvdcclggflapfmsaagyplppfdfslpgvtsisvdthkygftpkgssvvlyrdlkykhcqyfvtsdwpggnygspsvsgsrsggIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSdlwlylpw
Flexible Loop (DISEMBL)
MADFLANLLHNLKISInsqfvnkePWQIVAMTTASVLTTVYVYESLFsrdpfdtdsltgklkkrvfklarkipavrkkleeetgKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVtsdwpggnygSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQnlsdlwlylpw
Low Complexity Region (SEG)
MADFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYgspsvsgsrsggIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLPW
Disordered region (IsUnstruct)
***FLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGS******RSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYL**
Disordered Region (DISOPRED)
*ADFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKK*********************************RN*LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLPW
Disordered Region (DISEMBL)
MADFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY*********SGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLPW
Disordered Region (DISPRO)
MADFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLPW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLPW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	435	2.2.26 [Sep-21-2011]
Q9V7Y2	545	Sphingosine-1-phosphate l	yes	N/A	0.912	0.728	0.550	1e-129
Q8R0X7	568	Sphingosine-1-phosphate l	yes	N/A	0.940	0.720	0.492	1e-115
O95470	568	Sphingosine-1-phosphate l	yes	N/A	0.931	0.713	0.490	1e-113
Q8CHN6	568	Sphingosine-1-phosphate l	yes	N/A	0.937	0.718	0.486	1e-113
Q5R4G0	568	Sphingosine-1-phosphate l	yes	N/A	0.931	0.713	0.488	1e-113
Q9Y194	552	Sphingosine-1-phosphate l	yes	N/A	0.903	0.711	0.446	6e-93
Q05567	589	Sphingosine-1-phosphate l	yes	N/A	0.841	0.621	0.446	1e-85
Q54RV9	528	Sphingosine-1-phosphate l	yes	N/A	0.859	0.708	0.394	4e-84
Q52RG7	539	Sphingosine-1-phosphate l	yes	N/A	0.760	0.614	0.415	2e-75
Q9C509	544	Sphingosine-1-phosphate l	yes	N/A	0.777	0.621	0.407	2e-73

>sp|Q9V7Y2|SGPL_DROME Sphingosine-1-phosphate lyase OS=Drosophila melanogaster GN=Sply PE=2 SV=1

 Score =  461 bits (1186), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/403 (55%), Positives = 289/403 (71%), Gaps = 6/403 (1%)

Query: 6   ANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRV 65
           ++ L  +   IN  F  KEPWQ+  +T  +VL  V+++ ++  +D    ++L  + K++ 
Sbjct: 7   SDCLKPVTEGINRAFGAKEPWQVATITATTVLGGVWLW-TVICQD----ENLYIRGKRQF 61

Query: 66  FKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYL 125
           FK A+KIPAVR+++E E  K    F+ +IK++NA L Y   LP +G ++ EIL LV  +L
Sbjct: 62  FKFAKKIPAVRRQVETELAKAKNDFETEIKKSNAHLTYSETLPEKGLSKEEILRLVDEHL 121

Query: 126 ARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCA 185
             GHY+W+ GRVSGAVY Y+ DLV+L+TEV+G  SYTNPLH D+FPGVCKMEAEV++M  
Sbjct: 122 KTGHYNWRDGRVSGAVYGYKPDLVELVTEVYGKASYTNPLHADLFPGVCKMEAEVVRMAC 181

Query: 186 RMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF 245
            +F+G   +CG MT+GGTESI+MA KAYRD+ARE KGI+ P IV+P T H AFDK   YF
Sbjct: 182 NLFHGNSASCGTMTTGGTESIVMAMKAYRDFAREYKGITRPNIVVPKTVHAAFDKGGQYF 241

Query: 246 GMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP 304
            + V+ + +   +Y VD+   + AI  NT++LVGS PNFPYGT+DDI AIA LG KY IP
Sbjct: 242 NIHVRSVDVDPETYEVDIKKFKRAINRNTILLVGSAPNFPYGTIDDIEAIAALGVKYDIP 301

Query: 305 VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364
           VHVD CLG F+   +  AGY L PFDF + GVTSIS DTHKYGF PKGSSV+LY D KYK
Sbjct: 302 VHVDACLGSFVVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGSSVILYSDKKYK 361

Query: 365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA 407
             Q+ VT+DWPGG YGSP+V+GSR+GGIIA CWA MM FG++ 
Sbjct: 362 DHQFTVTTDWPGGVYGSPTVNGSRAGGIIAACWATMMSFGYDG 404

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Sphingolipid catabolism is required for normal development including viability, reproduction and muscle development.
Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 1EC: .EC: 2EC: .EC: 2EC: 7

>sp|Q8R0X7|SGPL1_MOUSE Sphingosine-1-phosphate lyase 1 OS=Mus musculus GN=Sgpl1 PE=2 SV=1

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/422 (49%), Positives = 282/422 (66%), Gaps = 13/422 (3%)

Query: 16  INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
           +N      EPWQ++A +    L  V+VYE +F       +SL  + KK++FKL RK+P +
Sbjct: 30  VNGYCTKYEPWQLIAWSVLCTLLIVWVYELIF-----QPESLWSRFKKKLFKLIRKMPFI 84

Query: 76  RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
            +K+E++  K  K    ++       +Y   LP+QG    E+LE +  Y +     W+ G
Sbjct: 85  GRKIEQQVSKAKKDLVKNMPFLKVDKDYVKTLPAQGMGTAEVLERLKEYSSMDG-SWQEG 143

Query: 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
           + SGAVY  +  L +LL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGGP++C
Sbjct: 144 KASGAVYNGEPKLTELLVQAYGEFTWSNPLHPDIFPGLRKLEAEIVRMTCSLFNGGPDSC 203

Query: 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
           GC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AFDKAA+YFGMK+  + L 
Sbjct: 204 GCVTSGGTESILMACKAYRDLALE-KGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVALK 262

Query: 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315
            +  VD+ A++ AI+ NT MLV S P FP+G MD +  +AKL  +Y IP+HVD CLGGFL
Sbjct: 263 KNMEVDVQAMKRAISRNTAMLVCSTPQFPHGVMDPVPEVAKLAVRYKIPLHVDACLGGFL 322

Query: 316 APFMSAAGYPL-PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
             FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSVV+Y + KY+  Q+FV +DW
Sbjct: 323 IVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRTYQFFVGADW 382

Query: 375 PGGNYGSPSVSGSRSGGIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW 430
            GG Y SPS++GSR GGIIA CWAA+M+FG     EA   I     F  KS L+N+ +++
Sbjct: 383 QGGVYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARF-LKSELENIKNIF 441

Query: 431 LY 432
           ++
Sbjct: 442 IF 443

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|O95470|SGPL1_HUMAN Sphingosine-1-phosphate lyase 1 OS=Homo sapiens GN=SGPL1 PE=1 SV=3

 Score =  410 bits (1054), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/426 (49%), Positives = 285/426 (66%), Gaps = 21/426 (4%)

Query: 16  INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
           +N      EPWQ++A +    L  V+ YE +F       +SL  + KK+ FKL RK+P +
Sbjct: 30  VNGHCTKYEPWQLIAWSVVWTLLIVWGYEFVF-----QPESLWSRFKKKCFKLTRKMPII 84

Query: 76  RKKLEEETGKVAKLFQDDIKQNNAGL----EYFLELPSQGRNRLEILELVSNYLARGHYD 131
            +K++++  K     +DDI +N + L    EY   LPSQG +   +LE +  Y +   + 
Sbjct: 85  GRKIQDKLNKT----KDDISKNMSFLKVDKEYVKALPSQGLSSSAVLEKLKEYSSMDAF- 139

Query: 132 WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191
           W+ GR SG VY  ++ L +LL + +G  +++NPLHPDIFPG+ K+EAE++++   +FNGG
Sbjct: 140 WQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGG 199

Query: 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251
           P++CGC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AF+KAA+YFGMK+  
Sbjct: 200 PDSCGCVTSGGTESILMACKAYRDLAFE-KGIKTPEIVAPQSAHAAFNKAASYFGMKIVR 258

Query: 252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
           + LT    VD+ A++ AI+ NT MLV S P FP+G +D +  +AKL  KY IP+HVD CL
Sbjct: 259 VPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACL 318

Query: 312 GGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370
           GGFL  FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSS+VLY D KY++ Q+FV
Sbjct: 319 GGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFV 378

Query: 371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNL 426
            +DW GG Y SP+++GSR GGI A CWAA+M+FG     EA   I     F  KS L+N+
Sbjct: 379 DTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARF-LKSELENI 437

Query: 427 SDLWLY 432
             ++++
Sbjct: 438 KGIFVF 443

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q8CHN6|SGPL1_RAT Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus GN=Sgpl1 PE=2 SV=1

 Score =  409 bits (1051), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/421 (48%), Positives = 280/421 (66%), Gaps = 13/421 (3%)

Query: 16  INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
           +N      EPWQ++A +    L  V+VYE +F       +SL  + K ++F+L RK+P +
Sbjct: 30  VNGYCTKYEPWQLIAGSVLCTLLVVWVYELIF-----QPESLWSRFKNKLFRLIRKMPFI 84

Query: 76  RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
            +K++++  K  K    ++       +Y   LP+QG +  E+LE +  Y +   + W+ G
Sbjct: 85  GRKIQQQLTKAKKDLVKNMPFLKLDKDYVKTLPAQGLSTAEVLERLKEYSSMDVF-WQEG 143

Query: 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
           + SGAVY  +  L +LL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGGP++C
Sbjct: 144 KASGAVYSGEPKLTELLVQAYGEFTWSNPLHPDIFPGLRKLEAEIVRMTCSLFNGGPDSC 203

Query: 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
           GC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AFDKAA+YFGMK+  +   
Sbjct: 204 GCVTSGGTESILMACKAYRDLALE-KGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVAQK 262

Query: 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315
            +  VD+ A++ AI+ NT MLV S P FP+G +D I  +AKL  KY IP HVD CLGGFL
Sbjct: 263 KNMEVDVRAMKRAISRNTAMLVCSAPQFPHGVIDPIPEVAKLAVKYKIPFHVDACLGGFL 322

Query: 316 APFMSAAGYPL-PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
             FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSVV+Y + KY+  Q+FV +DW
Sbjct: 323 IVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRKYQFFVDADW 382

Query: 375 PGGNYGSPSVSGSRSGGIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW 430
            GG Y SPS++GSR GGIIA CWAA+M+FG     EA   I     F  KS L+N+ +++
Sbjct: 383 QGGIYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARF-LKSELENIKNIF 441

Query: 431 L 431
           +
Sbjct: 442 I 442

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q5R4G0|SGPL1_PONAB Sphingosine-1-phosphate lyase 1 OS=Pongo abelii GN=SGPL1 PE=2 SV=1

 Score =  407 bits (1047), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/426 (48%), Positives = 284/426 (66%), Gaps = 21/426 (4%)

Query: 16  INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
           +N      EPWQ++A +    L  V+ YE +F       +SL  + KK+ FKL RK+P +
Sbjct: 30  VNGHCTKYEPWQLIAWSVVWTLLIVWGYEFVF-----QPESLWSRFKKKCFKLTRKMPII 84

Query: 76  RKKLEEETGKVAKLFQDDIKQNNAGL----EYFLELPSQGRNRLEILELVSNYLARGHYD 131
            +K++++  K     +DDI +N + L    EY   LPSQG +   +LE +  Y +   + 
Sbjct: 85  GRKIQDKLNKT----KDDISKNMSFLKVDKEYVKALPSQGLSSSAVLEKLKEYSSMDAF- 139

Query: 132 WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191
           W+ GR SG VY  ++ L +LL + +G  +++NPLHPDIFPG+ K+EAE++++   +FNGG
Sbjct: 140 WQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGG 199

Query: 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251
           P++CGC+TSGGTESI+MACKAYRD A E KGI   EIV P +AH AF+KAA+YFGMK+  
Sbjct: 200 PDSCGCVTSGGTESILMACKAYRDLAFE-KGIKTSEIVAPQSAHAAFNKAASYFGMKIVR 258

Query: 252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
           + LT    VD+ A++ AI+ NT MLV S P FP+G +D +  +AKL  KY IP+HVD CL
Sbjct: 259 VPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACL 318

Query: 312 GGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370
           GGFL  FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSS+VLY D KY++ Q+FV
Sbjct: 319 GGFLTVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFV 378

Query: 371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNL 426
            +DW GG Y SP+++GSR GGI A CWAA+M+FG     EA   I     F  KS L+N+
Sbjct: 379 DTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARF-LKSELENI 437

Query: 427 SDLWLY 432
             ++++
Sbjct: 438 KGIFVF 443

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q9Y194|SGPL_CAEEL Sphingosine-1-phosphate lyase OS=Caenorhabditis elegans GN=spl-1 PE=1 SV=1

 Score =  341 bits (875), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 179/401 (44%), Positives = 251/401 (62%), Gaps = 8/401 (1%)

Query: 16  INSQFVNKEPWQIV-AMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPA 74
           IN +    +P  +V A    +++ T  V+    S DP     +  ++   VF L RK+PA
Sbjct: 22  INDRLSRYDPVVLVLAAFGGTLVYTKVVHLYRKSEDP-----ILKRMGAYVFSLLRKLPA 76

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           VR K+E+E         + I +++   ++   LP    ++  I+EL   Y     ++   
Sbjct: 77  VRDKIEKELAAEKPKLIESIHKDDKDKQFISTLPIAPLSQDSIMELAKKYEDYNTFNIDG 136

Query: 135 GRVSGAVYYYQQ-DLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE 193
           GRVSGAVY  +  + ++LL +++   +++NPLHPD+FPG  KMEAE+I+M   ++NG  +
Sbjct: 137 GRVSGAVYTDRHAEHINLLGKIYEKYAFSNPLHPDVFPGARKMEAELIRMVLNLYNGPED 196

Query: 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR 253
           + G +TSGGTESI+MAC +YR+ A    GI  P I+   TAH AFDKAA+  GM+++H+ 
Sbjct: 197 SSGSVTSGGTESIIMACFSYRNRAHS-LGIEHPVILACKTAHAAFDKAAHLCGMRLRHVP 255

Query: 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
           + S   VDL  ++  I  N  MLVGS PNFP GT+D I  IAKLG+KYGIPVHVD CLGG
Sbjct: 256 VDSDNRVDLKEMERLIDSNVCMLVGSAPNFPSGTIDPIPEIAKLGKKYGIPVHVDACLGG 315

Query: 314 FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD 373
           F+ PFM+ AGY +P FDF  PGVTSIS DTHKYG TPKGSS+V+YR  +  H QYF  +D
Sbjct: 316 FMIPFMNDAGYLIPVFDFRNPGVTSISCDTHKYGCTPKGSSIVMYRSKELHHFQYFSVAD 375

Query: 374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414
           W GG Y +P+++GSR+G   A  WA ++ FG +  V  C +
Sbjct: 376 WCGGIYATPTIAGSRAGANTAVAWATLLSFGRDEYVRRCAQ 416

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine (By similarity). Essential for normal development, growth and reproduction.

Caenorhabditis elegans (taxid: 6239)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q05567|SGPL_YEAST Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DPL1 PE=1 SV=1

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 168/376 (44%), Positives = 237/376 (63%), Gaps = 10/376 (2%)

Query: 63  KRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVS 122
           +R+F+     P +R  +E+E  KV +  +D++ ++++ L  F +LPS G  + +++E ++
Sbjct: 94  RRLFRWLLDSPFLRGTVEKEVTKVKQSIEDELIRSDSQLMNFPQLPSNGIPQDDVIEELN 153

Query: 123 --NYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180
             N L   H  WK G+VSGAVY+   DL+ L T  +      N LHPD+FP V KME+EV
Sbjct: 154 KLNDLIP-HTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEV 212

Query: 181 IKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD 239
           + M  RMFN   +T    T+ G  ES+++AC + + YA   +GI+ PEI+ P TAH  FD
Sbjct: 213 VSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFD 272

Query: 240 KAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298
           KAA YFGMK++H+ L  ++Y VDL  ++  I  NT++LVGS PNFP+G  DDI  + K+ 
Sbjct: 273 KAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTILLVGSAPNFPHGIADDIEGLGKIA 332

Query: 299 EKYGIPVHVDCCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL 357
           +KY +P+HVD CLG F+  FM  AGY  LP  DF +PGVTSIS DTHKYGF PKGSSV++
Sbjct: 333 QKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIM 392

Query: 358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC---VR 414
           YR+   +  QY+V   W GG YGSP+++GSR G I+  CWA M+  G    +  C   V 
Sbjct: 393 YRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVG 452

Query: 415 YHFNYKSCLQ-NLSDL 429
               +K  +Q N+ DL
Sbjct: 453 AAMKFKKYIQENIPDL 468

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q54RV9|SGPL_DICDI Sphingosine-1-phosphate lyase OS=Dictyostelium discoideum GN=sglA PE=2 SV=1

 Score =  312 bits (799), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 155/393 (39%), Positives = 231/393 (58%), Gaps = 19/393 (4%)

Query: 17  NSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVR 76
           N    + +P ++V  T      ++  Y+++  RD         KL K++F+  + +P V 
Sbjct: 5   NDYLKDYQPAKLVLATAGITAASILAYQAITDRD------FKDKLNKKIFRSIKSMPGVS 58

Query: 77  KKLEEETGK----VAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDW 132
             +++E  K    + K+F+ D++  +        LP +G    +++E +          W
Sbjct: 59  DIVKKERAKAKVELKKMFKTDVRNAH------YTLPLKGIKHEDLIEEMKALAKVDESHW 112

Query: 133 KHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP 192
              +VSG VY  +++   LL E + L S +NPLHP +FP + K E E I M + M N   
Sbjct: 113 VDSKVSGCVYLGEKEHTKLLNEAYSLFSLSNPLHPSVFPSIRKFETESISMVSNMLNAHS 172

Query: 193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI 252
           +  G +TSGGTESI MA KAYRD+ ++      PEIV+P T H AFDKA  Y  +++ HI
Sbjct: 173 KVVGSLTSGGTESIFMAVKAYRDFYKDR--TDRPEIVVPVTIHAAFDKACEYLKIRIVHI 230

Query: 253 RLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
            +   SY VD+AA++ AI  +T+++ GS  NFP+G +D I  IAKL ++Y I  HVD CL
Sbjct: 231 DVDPVSYKVDMAAMKKAINKDTILVAGSAVNFPHGIIDPIDEIAKLAQQYDIGCHVDACL 290

Query: 312 GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVT 371
           GGF+ PF     Y +P FDF +PGVTS+SVDTHK+G+  KG+SVVL+ + K +   YFV 
Sbjct: 291 GGFILPFAEKLDYDIPVFDFRIPGVTSMSVDTHKFGYAAKGTSVVLFGNKKLRRAMYFVA 350

Query: 372 SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404
            +WPGG Y SP++ GSR GG++A CWA+++  G
Sbjct: 351 PNWPGGIYASPTLPGSRPGGLVAACWASLVSMG 383

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine (By similarity). Sphingosine-1-phosphate (S1P) probably acts intracellularly as a second messenger perhaps by promoting cell proliferation; the absence of S1P lyase increases its concentration. This leads to increased lateral pseudopod formation as well as defects in the efficiency of chemotaxis (PubMed:15476260). Overexpression of S1P lyase causes decreased growth rates, entry into stationary phase at lower cell density and increased sensitivity to the antitumor agents cisplatin and carboplatin; these effects are more pronounced in cells that express more enzyme (PubMed:15190000).

Dictyostelium discoideum (taxid: 44689)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q52RG7|SGPL_ORYSJ Sphingosine-1-phosphate lyase OS=Oryza sativa subsp. japonica GN=SPL PE=2 SV=2

 Score =  283 bits (723), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 206/344 (59%), Gaps = 13/344 (3%)

Query: 72  IPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYD 131
           +P V   +  E  KV    Q       + L    ELP+ G +   I +L +  L     +
Sbjct: 68  LPGVSAYINAEKRKVVDQLQSGGTSTKSTLR--TELPTVGLSNQVINDLET--LKARDVN 123

Query: 132 WKHGRVSGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMF 188
           W+ G+ SG VY      +    L+ + + + S+TNPLH D+F  V ++EAEV+ M A + 
Sbjct: 124 WQ-GKCSGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAALL 182

Query: 189 -----NGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN 243
                + G + CG MTSGGTESI++A K  RDY R +KGI+ PE+++  +AH A+DKAA 
Sbjct: 183 GIKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRTKKGITKPEMIIAESAHSAYDKAAQ 242

Query: 244 YFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI 303
           YF +KV+ + +   +  D+   +  I GNT+M+VGS P FP+G +D I  + +L  +Y I
Sbjct: 243 YFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRYDI 302

Query: 304 PVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY 363
            +HVD CLGGF+ PF    GYP+PPFDF + GVTSIS D HKYG  PKG+S+VLY++ + 
Sbjct: 303 CLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEI 362

Query: 364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA 407
           +   +F  ++W GG Y SP+++GSR GG+IA  WAAM   G   
Sbjct: 363 RKPYFFSVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMTSLGLNG 406

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

>sp|Q9C509|SGPL_ARATH Sphingosine-1-phosphate lyase OS=Arabidopsis thaliana GN=At1g27980 PE=2 SV=1

 Score =  276 bits (707), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 143/351 (40%), Positives = 205/351 (58%), Gaps = 13/351 (3%)

Query: 65  VFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNY 124
           +  L + IP V+  ++ E  KV    Q             L +   G   +E+LE + N 
Sbjct: 66  IMGLLKMIPGVQNYIDAEKQKVVDQLQSGSSSKKKNKTEVLPVKGLG---VEVLEKMENE 122

Query: 125 LARGHYDWKHGRVSGAVYY---YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVI 181
             R    W+ G+ SG VY      +    L+ +   + ++TNPLH D+F  V + E+EV+
Sbjct: 123 -KRNDAIWQ-GKCSGTVYIGGAESEGHFSLINQACSMFAHTNPLHIDVFQSVVRFESEVV 180

Query: 182 KMCARMFNG-----GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHP 236
            M A +        G + CG MTSGGTESI++A K+ RDY + +KGI+ PE+++P + H 
Sbjct: 181 AMTAALLGSKETASGGQICGNMTSGGTESIVLAVKSSRDYMKYKKGITRPEMIIPESGHS 240

Query: 237 AFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAK 296
           A+DKAA YF +K+  + +   +  D+ A +  I  NT+M+VGS P FP+G +D I  + +
Sbjct: 241 AYDKAAQYFKIKLWRVPVDKDFRADVKATRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ 300

Query: 297 LGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVV 356
           L   YGI  HVD CLGGF+ PF    GY +PPFDFS+ GVTSISVD HKYG  PKG+S V
Sbjct: 301 LALSYGICFHVDLCLGGFVLPFARKLGYQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTV 360

Query: 357 LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA 407
           LYR+ + +  Q+   ++W GG Y SP+++GSR G ++A  WAAMM  G E 
Sbjct: 361 LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEG 411

Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 2

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	435
328712953	541	PREDICTED: sphingosine-1-phosphate lyase	0.924	0.743	0.578	1e-143
347966447	541	AGAP001724-PA [Anopheles gambiae str. PE	0.889	0.715	0.601	1e-137
312375604	541	hypothetical protein AND_13953 [Anophele	0.889	0.715	0.603	1e-136
157135111	538	sphingosine phosphate lyase [Aedes aegyp	0.914	0.739	0.592	1e-135
170067239	539	sphingosine-1-phosphate lyase [Culex qui	0.914	0.738	0.589	1e-134
289741101	548	glutamate decarboxylase/sphingosine phos	0.885	0.702	0.580	1e-134
332024899	555	Sphingosine-1-phosphate lyase [Acromyrme	0.896	0.702	0.565	1e-133
91076782	543	PREDICTED: similar to sphingosine phosph	0.924	0.740	0.573	1e-132
307205249	540	Sphingosine-1-phosphate lyase [Harpegnat	0.894	0.720	0.574	1e-131
383857355	548	PREDICTED: sphingosine-1-phosphate lyase	0.910	0.722	0.534	1e-130

>gi|328712953|ref|XP_001943099.2| PREDICTED: sphingosine-1-phosphate lyase-like [Acyrthosiphon pisum]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 236/408 (57%), Positives = 313/408 (76%), Gaps = 6/408 (1%)

Query: 3   DFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLK 62
           D + N +   K S+N+ F   EPWQ+ +++ +SVLT+++++  LF       +SL  +LK
Sbjct: 2   DLVKNGILLCKNSVNNLFGQSEPWQVASISASSVLTSIWLWNFLF-----QDESLYNRLK 56

Query: 63  KRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVS 122
           K  F   +KIP  +K++EEET K++ LF++++ +N    +Y +ELPSQG +R E+++ V+
Sbjct: 57  KFTFTQIKKIPKFKKQVEEETKKISDLFENEVIENTKSEKYVVELPSQGISRDELIKTVN 116

Query: 123 NYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182
            YL  G Y+WK G +SGA+YYY ++L+ LLTEV+GL SYTNPLH DIFPG+CKMEAEV++
Sbjct: 117 RYLNLGKYNWKEGFISGAIYYYDEELIKLLTEVYGLASYTNPLHSDIFPGICKMEAEVVR 176

Query: 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA 242
           +   +F+G   +CG MTSGGTESI+MACKAYRD+ R E GI   EI++P +AHPAFDKAA
Sbjct: 177 LVVNLFHGDSNSCGTMTSGGTESIVMACKAYRDFGRNECGIKKGEIIVPRSAHPAFDKAA 236

Query: 243 NYFGMKVKHIRL-TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301
           +YFG+K+ HI L   +YTV+L  +++AIT NT++LVGS PNFPYGT DDI AI+ LG KY
Sbjct: 237 SYFGIKIIHISLHPDTYTVNLKKMENAITKNTLLLVGSFPNFPYGTSDDIEAISALGLKY 296

Query: 302 GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL 361
            IPVHVDCCLGGF+A FM  AG+PLPPFDF+LPGVTSIS DTHKYG+ PKGSSV+LY D 
Sbjct: 297 NIPVHVDCCLGGFIAAFMPQAGFPLPPFDFNLPGVTSISADTHKYGYAPKGSSVILYSDK 356

Query: 362 KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           KY+H QY+V ++WPGG+YGSP+VSGSRSGGIIA CWA +MYFG    +
Sbjct: 357 KYRHNQYYVCTEWPGGHYGSPTVSGSRSGGIIAACWATLMYFGMNGYI 404

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347966447|ref|XP_321361.5| AGAP001724-PA [Anopheles gambiae str. PEST] gi|333470056|gb|EAA00871.5| AGAP001724-PA [Anopheles gambiae str. PEST]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/396 (60%), Positives = 292/396 (73%), Gaps = 9/396 (2%)

Query: 15  SINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPA 74
           SI+  F  ++PWQIVA+TT +VL ++++ + LF  +     SL  + KK+VFKLAR IPA
Sbjct: 11  SIDRVFTGRQPWQIVAITTTTVLGSIWLCQVLFQEE-----SLYRRAKKKVFKLARLIPA 65

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           VR++++ E  K+   F  DI Q      Y+ ELP     + EIL+ V  YL  GHY WK 
Sbjct: 66  VRRRVDAEIEKINDGFIKDISQTG---NYYTELPHDSMGQAEILKKVDEYLDLGHYRWKE 122

Query: 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET 194
           G +SGAVYYY  +L+ L+TEV+G  SYTNPLHPD+FPGVCKMEAEV++M A +F+GGP  
Sbjct: 123 GFISGAVYYYNPELIKLVTEVYGKASYTNPLHPDVFPGVCKMEAEVVRMTATLFHGGPAA 182

Query: 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254
           CG MT+GGTESIMMACKAYRDYA +++GI+ P +VLP TAH  FDKAA Y G+  K + +
Sbjct: 183 CGTMTTGGTESIMMACKAYRDYANDQRGITKPNMVLPVTAHTGFDKAAKYLGIYTKVVPV 242

Query: 255 TSSYT-VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
               T VD+AA++ AI  NTVMLVGS PNFPYGTMDDI AIA LG KY IPVHVD CLGG
Sbjct: 243 NGDTTEVDIAAMERAINRNTVMLVGSAPNFPYGTMDDIEAIAALGRKYNIPVHVDACLGG 302

Query: 314 FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD 373
           FL  FM  AGYP+ PFDFS+PGVTSIS DTHKYGFTPKGSSV+LY +  Y+H QY VT++
Sbjct: 303 FLIVFMKRAGYPVRPFDFSIPGVTSISADTHKYGFTPKGSSVILYSEKVYRHYQYTVTTE 362

Query: 374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           WPGG YGSP+V+GSR+GGIIA  WA MM FG +  V
Sbjct: 363 WPGGVYGSPTVNGSRAGGIIAATWATMMNFGLDGYV 398

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375604|gb|EFR22942.1| hypothetical protein AND_13953 [Anopheles darlingi]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/396 (60%), Positives = 287/396 (72%), Gaps = 9/396 (2%)

Query: 15  SINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPA 74
           SI+  F  ++PWQIVA+TT +VL  V++ + LF       +SL  + KK+VFKLAR IP 
Sbjct: 11  SIDRVFTGRQPWQIVAITTTTVLGAVWLCQVLFQ-----DESLYSRAKKKVFKLARLIPQ 65

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           VR+++EEE  K+   F  DI Q  A   Y+ ELP  G     I+  V  YL  GHY WK 
Sbjct: 66  VRRRVEEEIEKINDGFVKDISQKGA---YYTELPGDGLTPEAIIAKVDEYLELGHYRWKE 122

Query: 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET 194
           G +SGAVYYY  +L+ L+T V+G  SYTNPLHPD+FPGVCKMEAEV++M A +F GG   
Sbjct: 123 GYISGAVYYYNPELIKLVTSVYGKASYTNPLHPDVFPGVCKMEAEVVRMTATLFQGGASA 182

Query: 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254
           CG MT+GGTESIMMACKAYRDYARE +G++ P +VLP TAH  FDKAA Y  +  K + +
Sbjct: 183 CGTMTTGGTESIMMACKAYRDYARENRGVTTPNMVLPVTAHTGFDKAAQYLNIFSKVVPV 242

Query: 255 TSSYT-VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
               T VD+ A++ AI  NTVMLVGS PNFPYGTMDDI AIA LG KY IPVHVD CLGG
Sbjct: 243 DPVTTAVDIRAMERAINRNTVMLVGSAPNFPYGTMDDIEAIAALGRKYNIPVHVDACLGG 302

Query: 314 FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD 373
           FL  FM  AGYP+PPFDFS+PGVTSIS DTHKYG+TPKGSSVVLY + KY+H QY VT+D
Sbjct: 303 FLIVFMKRAGYPVPPFDFSVPGVTSISADTHKYGYTPKGSSVVLYSEKKYRHHQYTVTTD 362

Query: 374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           WPGG YGSP+V+GSR+GGIIA  WA M+ FG +  V
Sbjct: 363 WPGGVYGSPTVNGSRAGGIIAATWATMINFGRDGYV 398

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135111|ref|XP_001656538.1| sphingosine phosphate lyase [Aedes aegypti] gi|108881322|gb|EAT45547.1| AAEL003188-PA [Aedes aegypti]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/407 (59%), Positives = 294/407 (72%), Gaps = 9/407 (2%)

Query: 9   LHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKL 68
           L  L   ++  F  K PWQIVA+TT++VL  ++++E L S D    +SL  + K+  FKL
Sbjct: 6   LKLLTAPVDRAFAGKAPWQIVAITTSTVLGAIWLWE-LLSED----ESLYSRFKRSFFKL 60

Query: 69  ARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARG 128
           AR+IP+VR+K+E E  K+ + F  D  Q     ++   LP  G  + +IL+ V  YLA G
Sbjct: 61  ARRIPSVRQKIETEIAKINEGFTKDAAQYG---QFTTVLPQDGLKQDQILQKVDEYLALG 117

Query: 129 HYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMF 188
           HY WK G +SGAVYY+  DLV L+TEV+G  SYTNPLH D+FPG+CKMEAEVI+M A +F
Sbjct: 118 HYKWKEGFISGAVYYFNPDLVKLVTEVYGKASYTNPLHADVFPGICKMEAEVIRMTATLF 177

Query: 189 NGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK 248
           NG  + CG MT+GGTESIMMACKAYRDY R+ KGI+ P IVLP TAH AFDK+A YFGM 
Sbjct: 178 NGSAKACGTMTTGGTESIMMACKAYRDYGRDVKGITKPNIVLPVTAHTAFDKSAKYFGMF 237

Query: 249 VKHIRLTSSYT-VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307
            K + +  + T VD+ A++ AI  NTVMLVGS PN+PYGTMD+I AIAKLG+KY IPVHV
Sbjct: 238 TKTVPIDPATTEVDVKAMERAINRNTVMLVGSAPNYPYGTMDNIEAIAKLGKKYNIPVHV 297

Query: 308 DCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ 367
           D CLGGFL  FM  AGY + PFDFSL GVTSIS DTHKYGFTPKGSSV+LY + KY+H Q
Sbjct: 298 DACLGGFLIIFMRRAGYEVKPFDFSLDGVTSISADTHKYGFTPKGSSVILYSEKKYRHYQ 357

Query: 368 YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414
           Y VT+DWPGG YGSP V+GSR+GGIIA  WA MM FG +  V    R
Sbjct: 358 YTVTTDWPGGVYGSPIVNGSRAGGIIAATWATMMNFGLDGYVEATKR 404

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170067239|ref|XP_001868402.1| sphingosine-1-phosphate lyase [Culex quinquefasciatus] gi|167863435|gb|EDS26818.1| sphingosine-1-phosphate lyase [Culex quinquefasciatus]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/407 (58%), Positives = 294/407 (72%), Gaps = 9/407 (2%)

Query: 4   FLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKK 63
            L   L  L   ++     + PWQIV +TT++VL  V++++ L S D    +SL  + ++
Sbjct: 1   MLKTHLELLTGPVDRALAGRAPWQIVTITTSTVLGLVWLWD-LLSED----ESLYARARR 55

Query: 64  RVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSN 123
           R FKLARKIPAV++K+  E  K+ + F  D  Q+ A   +   LP QG  + EIL+ V +
Sbjct: 56  RFFKLARKIPAVQRKITAEIDKINEGFVKDASQHGA---FTTRLPEQGLKQDEILKKVDD 112

Query: 124 YLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM 183
           YLA GHY WK G +SG VYY+  +LV L+TEV+G  SYTNPLH D+FPGVCKMEAEV++M
Sbjct: 113 YLALGHYRWKEGFLSGGVYYFDPELVKLVTEVYGKASYTNPLHADVFPGVCKMEAEVVRM 172

Query: 184 CARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN 243
            A +FNG    CG MT+GGTESIMMACKAYRDYAR+ KGI+ P IVLP TAH AFDK+A 
Sbjct: 173 TATLFNGDGNACGTMTTGGTESIMMACKAYRDYARDVKGITKPNIVLPKTAHTAFDKSAK 232

Query: 244 YFGMKVKHIRL-TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG 302
           YFGM  K + +   S  VD+ A++ AI GNTVMLVGS PN+PYGT+DDI AIAKLG+KY 
Sbjct: 233 YFGMYTKTVPVHPDSTEVDIQAMERAINGNTVMLVGSAPNYPYGTIDDIEAIAKLGKKYN 292

Query: 303 IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK 362
           IPVHVD CLGGFL  FM  AGY + PFDFS+ GVTSIS DTHKYGFTPKGSSV+LY D  
Sbjct: 293 IPVHVDACLGGFLIIFMKKAGYSIKPFDFSVDGVTSISADTHKYGFTPKGSSVILYSDKI 352

Query: 363 YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           Y+H QY VT++WPGG YGSP+V+GSR+GGIIA  WA MM FG E  V
Sbjct: 353 YRHYQYTVTTEWPGGVYGSPTVNGSRAGGIIAATWATMMNFGLEGYV 399

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289741101|gb|ADD19298.1| glutamate decarboxylase/sphingosine phosphate lyase [Glossina morsitans morsitans]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/391 (58%), Positives = 297/391 (75%), Gaps = 6/391 (1%)

Query: 15  SINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPA 74
           +IN  FVN+EPWQ+  +T  +VL+  +++   F+      +S+  + KK+ F+  +K+P+
Sbjct: 17  NINRLFVNREPWQVATLTATAVLSAAWLWN--FANQE---ESIWLRSKKKFFQYVKKLPS 71

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           VR K++EE  K  + F+++I ++ A L Y LELP  G +  +IL+LV  +L  G+YDW+ 
Sbjct: 72  VRHKIDEELSKTNQNFENEISKSCAELYYNLELPENGLSNEKILKLVDQHLRIGNYDWRD 131

Query: 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET 194
           GRVSGA+Y + ++LVDL+T+V+G  SYTNPLHPDIFPGVCKMEAEVI+M  ++F GGP T
Sbjct: 132 GRVSGAIYGFHEELVDLVTKVYGKASYTNPLHPDIFPGVCKMEAEVIRMACKLFQGGPNT 191

Query: 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254
           CG MTSGGTESI++ACKAYRDYARE+KGI+   +V+P TAH AFDKAA YF + V+++ +
Sbjct: 192 CGTMTSGGTESIILACKAYRDYAREQKGITKANMVVPRTAHAAFDKAAQYFNIHVRYVNV 251

Query: 255 -TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
            T SY V+L A + AI GNT++LVGS PNFPYGT+DDI AIA LG KY IPVHVD CLG 
Sbjct: 252 DTESYEVNLKAFKKAINGNTILLVGSAPNFPYGTLDDIEAIAALGLKYDIPVHVDACLGS 311

Query: 314 FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD 373
           F+  F   AGY L  FDFS+PGVTSIS DTHKYGF PKGSSV+LY D K+++ Q+ VT+D
Sbjct: 312 FVIVFAREAGYKLRRFDFSIPGVTSISADTHKYGFAPKGSSVILYSDKKFRNHQFTVTTD 371

Query: 374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404
           WPGG YGSP+V+GSR+GGIIA CWA MM +G
Sbjct: 372 WPGGVYGSPTVNGSRAGGIIAACWATMMSYG 402

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024899|gb|EGI65087.1| Sphingosine-1-phosphate lyase [Acromyrmex echinatior]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/396 (56%), Positives = 296/396 (74%), Gaps = 6/396 (1%)

Query: 15  SINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPA 74
           +IN  F NKEPWQI AMT+ + L TV+++  ++       +SL  + KK +F+LAR IP+
Sbjct: 29  AINHIFENKEPWQIAAMTSTATLATVWLWTFIYQ-----DESLLERGKKHMFRLARYIPS 83

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           +R K+  E  KV + F++D+     G  + + LP  G    ++L LV+ Y+  G YDWK+
Sbjct: 84  IRNKINTELAKVNETFENDVLHRFKGSSFIVHLPKNGLKNEKLLNLVNQYIYLGDYDWKN 143

Query: 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET 194
           GRVSG VY    +L +L+  V+ L SYTNPLHP++FPG+CKMEAEV+++   +FNG  ++
Sbjct: 144 GRVSGTVYRTNSELTELMGNVYALASYTNPLHPEVFPGICKMEAEVVRIGCNLFNGDKDS 203

Query: 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254
           CG MTSGGTESI++ACKAYRDYAR+ KGI  PEIVLP TAH AFDKA+ Y  +KV ++ +
Sbjct: 204 CGTMTSGGTESILLACKAYRDYARDVKGIKKPEIVLPVTAHAAFDKASQYLKIKVCYVPV 263

Query: 255 T-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
              S+TV +  ++ +IT NT+MLVGS PNFP+GTMD+I AI++LG KY IPVHVD CLGG
Sbjct: 264 HPHSFTVCIETMKKSITKNTIMLVGSTPNFPHGTMDNIEAISELGIKYDIPVHVDGCLGG 323

Query: 314 FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD 373
           FLA FMS AGYPL PFDF LPGVTSIS DTHKYG+ PKGSS++LYR+ KY+H QY +T+D
Sbjct: 324 FLACFMSDAGYPLSPFDFKLPGVTSISADTHKYGYAPKGSSLILYRNKKYRHYQYSITTD 383

Query: 374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           WPGG YGSP+++GSR+GGIIATCWA ++Y+GF+  V
Sbjct: 384 WPGGIYGSPTINGSRAGGIIATCWATLLYYGFDEYV 419

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076782|ref|XP_967792.1| PREDICTED: similar to sphingosine phosphate lyase isoform 1 [Tribolium castaneum] gi|270001960|gb|EEZ98407.1| hypothetical protein TcasGA2_TC000875 [Tribolium castaneum]

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/408 (57%), Positives = 295/408 (72%), Gaps = 6/408 (1%)

Query: 3   DFLANLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLK 62
           D ++  L  LK  +N+ F  KEPWQIV +TT SVL  V+++E  F+++    +++T + K
Sbjct: 2   DVISQHLTILKTGVNNSFAGKEPWQIVTITTTSVLFFVWLHE-FFNQE----ETVTQRAK 56

Query: 63  KRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVS 122
           K +FKL + IP+VR+K E E  KV++ F+ +  +    L Y  +LP +     +IL  V 
Sbjct: 57  KTIFKLVKLIPSVRQKFETELAKVSESFEKETVEKTKHLTYITKLPEKKLTAEQILNCVE 116

Query: 123 NYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182
             L  G YDWK G VSGAVYY+   L+ L+TEV+GLTSYTNPLHPD+FPG+CKMEAEVI+
Sbjct: 117 ENLKVGDYDWKGGLVSGAVYYHNPALIKLVTEVYGLTSYTNPLHPDLFPGLCKMEAEVIR 176

Query: 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA 242
           M   +F G   +CG +T+GGTESI+MACKA+RDYARE +GI  PEI++P TAH AFDKAA
Sbjct: 177 MSCNLFYGDENSCGIVTTGGTESIVMACKAWRDYAREVRGIRKPEIIVPVTAHSAFDKAA 236

Query: 243 NYFGMKVKHIRLTSSYT-VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301
            Y  M+V+ I +    T  ++ A++ AI  NT++LVGS PNFPYGTMDDI AI+ LG KY
Sbjct: 237 QYLRMRVRSIPVDPQTTKANIKAMKRAINCNTILLVGSAPNFPYGTMDDIEAISALGVKY 296

Query: 302 GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL 361
            IPVHVD CLGGFL  FM  AGYP+P  DF LPGVTSIS DTHKYGF PKGSSVVLYRD 
Sbjct: 297 NIPVHVDSCLGGFLTVFMEDAGYPVPLCDFRLPGVTSISADTHKYGFAPKGSSVVLYRDK 356

Query: 362 KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           KY+H QY VT+DWPGG YGSP+++GSR+GG IA CWAAM+ FG E  V
Sbjct: 357 KYRHYQYTVTTDWPGGVYGSPTLAGSRAGGNIAVCWAAMLNFGKEGYV 404

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205249|gb|EFN83629.1| Sphingosine-1-phosphate lyase [Harpegnathos saltator]

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/395 (57%), Positives = 295/395 (74%), Gaps = 6/395 (1%)

Query: 16  INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
           +N+ F NKEPWQIV MTT + L T++++  +F       +SLT + KK++FKLAR IPA+
Sbjct: 13  LNNIFQNKEPWQIVTMTTTATLATIWLWNFIFQ-----DESLTTRAKKQIFKLARYIPAI 67

Query: 76  RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
           + K+ +E   V ++FQ D       L++ ++LP++G +  EIL +V  ++  G Y W+ G
Sbjct: 68  QDKINKELTNVNEIFQKDALDRLKDLQFTIKLPAKGLSDEEILNMVKQHVYIGDYKWETG 127

Query: 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
           +VSG VY     LV L+  ++ + SYTNPLHPD+FPGVCKMEAEV++M   +F+G  E C
Sbjct: 128 QVSGTVYRNDDKLVSLMGNIYAIASYTNPLHPDVFPGVCKMEAEVVRMACSLFHGDNEAC 187

Query: 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
           G MT+GGTESI++ACKAYRDYARE KGI  PEIV+P TAH AFDKAA YF +KV  + + 
Sbjct: 188 GTMTTGGTESILLACKAYRDYAREVKGIKNPEIVMPITAHSAFDKAAQYFNLKVHSVPVN 247

Query: 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
             SYTV + A++ AIT NT+MLVGS PNFPYGTMD+I  I++LG KY IPVHVD CLGGF
Sbjct: 248 RDSYTVCINAMKRAITKNTIMLVGSAPNFPYGTMDNIKEISELGMKYNIPVHVDACLGGF 307

Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
           LA FM+ AGY  PPFDF LPGVTSIS DTHKYG+ PKGSS++LYR+ KY+H QY +T+DW
Sbjct: 308 LACFMTDAGYNFPPFDFQLPGVTSISADTHKYGYAPKGSSLILYRNKKYRHYQYTITTDW 367

Query: 375 PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409
           PGG YGSP+++GSR+GGIIA CWA +M+FG+ A V
Sbjct: 368 PGGIYGSPTINGSRAGGIIAACWATLMHFGYGAYV 402

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857355|ref|XP_003704170.1| PREDICTED: sphingosine-1-phosphate lyase-like [Megachile rotundata]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/402 (53%), Positives = 300/402 (74%), Gaps = 6/402 (1%)

Query: 7   NLLHNLKISINSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVF 66
           ++ H++   +N+ F  KEPWQIV +T+ +VLT+V+++  +F       +SL  + KK++F
Sbjct: 3   SIAHSVTEFLNNYFQGKEPWQIVTITSTTVLTSVWLWNFVFQ-----DESLLERAKKKIF 57

Query: 67  KLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLA 126
            L   IP +R+++++E   + + F+  + +    + + ++LP +G +   IL+ V+  + 
Sbjct: 58  SLRYYIPTIRERIDQELNNINQTFEQQVVERMGTIPFVVKLPDKGLDPKNILDKVTECVQ 117

Query: 127 RGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCAR 186
            G+YDWK G+VSGA+Y    DL+ L+ +++ + SYTNPLHPD+FPG+CKMEAEV++M   
Sbjct: 118 LGNYDWKSGKVSGAIYRIDTDLLRLMGDIYSIASYTNPLHPDVFPGICKMEAEVVRMACN 177

Query: 187 MFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG 246
           +F+G  E+CG MTSGGTESI++ACK YRDYAR+ KGI  PE+V+P TAH AFDKAA Y  
Sbjct: 178 LFHGDEESCGTMTSGGTESILLACKTYRDYARQVKGIKHPEMVMPATAHSAFDKAAQYLK 237

Query: 247 MKVKHIRL-TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPV 305
           +K + + + T+SYTV + A++ AIT NT+MLVGS PNFPYGTMD+I AI+KLG KY IPV
Sbjct: 238 IKTRIVPVNTNSYTVCMKAMERAITRNTIMLVGSAPNFPYGTMDNIEAISKLGVKYNIPV 297

Query: 306 HVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH 365
           HVD CLGGFL  FMS AG+ +PPF F LPGVTSIS DTHKY + PKGSS++LYR+ K +H
Sbjct: 298 HVDACLGGFLICFMSDAGFNVPPFGFELPGVTSISADTHKYAYAPKGSSIILYRNKKLRH 357

Query: 366 CQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA 407
            QY +T+DWPGG YGSP+VSGSR+GGIIA+CWAA+MYFG++ 
Sbjct: 358 HQYTITTDWPGGIYGSPTVSGSRAGGIIASCWAALMYFGYDG 399

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	435
FB|FBgn0010591	545	Sply "Sphingosine-1-phosphate	0.887	0.708	0.540	5.9e-112
MGI|MGI:1261415	568	Sgpl1 "sphingosine phosphate l	0.940	0.720	0.476	2.6e-102
ZFIN|ZDB-GENE-070410-24	572	sgpl1 "sphingosine-1-phosphate	0.891	0.678	0.498	2.6e-102
UNIPROTKB|F1SUB2	568	SGPL1 "Uncharacterized protein	0.931	0.713	0.476	4.9e-101
UNIPROTKB|O95470	568	SGPL1 "Sphingosine-1-phosphate	0.931	0.713	0.476	7.9e-101
UNIPROTKB|E2RME9	568	SGPL1 "Uncharacterized protein	0.931	0.713	0.474	2.1e-100
UNIPROTKB|A5D788	568	SGPL1 "Uncharacterized protein	0.940	0.720	0.471	2.7e-100
RGD|628599	568	Sgpl1 "sphingosine-1-phosphate	0.937	0.718	0.470	7.1e-100
UNIPROTKB|Q8CHN6	568	Sgpl1 "Sphingosine-1-phosphate	0.937	0.718	0.470	7.1e-100
UNIPROTKB|F1NMD8	560	ASCC1 "Uncharacterized protein	0.871	0.676	0.492	2e-97

FB|FBgn0010591 Sply "Sphingosine-1-phosphate lyase" [Drosophila melanogaster (taxid:7227)]

 Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
 Identities = 212/392 (54%), Positives = 273/392 (69%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             IN  F  KEPWQ+  +T  +VL  V+++ ++  +D    ++L  + K++ FK A+KIPAV
Sbjct:    17 INRAFGAKEPWQVATITATTVLGGVWLW-TVICQD----ENLYIRGKRQFFKFAKKIPAV 71

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
             R+++E E  K    F+ +IK++NA L Y   LP +G ++ EIL LV  +L  GHY+W+ G
Sbjct:    72 RRQVETELAKAKNDFETEIKKSNAHLTYSETLPEKGLSKEEILRLVDEHLKTGHYNWRDG 131

Query:   136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
             RVSGAVY Y+ DLV+L+TEV+G  SYTNPLH D+FPGVCKMEAEV++M   +F+G   +C
Sbjct:   132 RVSGAVYGYKPDLVELVTEVYGKASYTNPLHADLFPGVCKMEAEVVRMACNLFHGNSASC 191

Query:   196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
             G MT+GGTESI+MA KAYRD+ARE KGI+ P IV+P T H AFDK   YF + V+ + + 
Sbjct:   192 GTMTTGGTESIVMAMKAYRDFAREYKGITRPNIVVPKTVHAAFDKGGQYFNIHVRSVDVD 251

Query:   256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
               +Y VD+   + AI  NT++LVGS PNFPYGT+DDI AIA LG KY IPVHVD CLG F
Sbjct:   252 PETYEVDIKKFKRAINRNTILLVGSAPNFPYGTIDDIEAIAALGVKYDIPVHVDACLGSF 311

Query:   315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
             +   +  AGY L PFDF + GVTSIS DTHKYGF PKGSSV+LY D KYK  Q+ VT+DW
Sbjct:   312 VVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGSSVILYSDKKYKDHQFTVTTDW 371

Query:   375 PGGNYXXXXXXXXXXXXIIATCWAAMMYFGFE 406
             PGG Y            IIA CWA MM FG++
Sbjct:   372 PGGVYGSPTVNGSRAGGIIAACWATMMSFGYD 403

GO:0008117 "sphinganine-1-phosphate aldolase activity" evidence=IDA;NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0030149 "sphingolipid catabolic process" evidence=IMP;NAS

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0046331 "lateral inhibition" evidence=IMP

MGI|MGI:1261415 Sgpl1 "sphingosine phosphate lyase 1" [Mus musculus (taxid:10090)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 201/422 (47%), Positives = 273/422 (64%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++A +    L  V+VYE +F   P   +SL  + KK++FKL RK+P +
Sbjct:    30 VNGYCTKYEPWQLIAWSVLCTLLIVWVYELIFQ--P---ESLWSRFKKKLFKLIRKMPFI 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
              +K+E++  K  K    ++       +Y   LP+QG    E+LE +  Y +     W+ G
Sbjct:    85 GRKIEQQVSKAKKDLVKNMPFLKVDKDYVKTLPAQGMGTAEVLERLKEYSSMDG-SWQEG 143

Query:   136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
             + SGAVY  +  L +LL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGGP++C
Sbjct:   144 KASGAVYNGEPKLTELLVQAYGEFTWSNPLHPDIFPGLRKLEAEIVRMTCSLFNGGPDSC 203

Query:   196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
             GC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AFDKAA+YFGMK+  + L 
Sbjct:   204 GCVTSGGTESILMACKAYRDLALE-KGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVALK 262

Query:   256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315
              +  VD+ A++ AI+ NT MLV S P FP+G MD +  +AKL  +Y IP+HVD CLGGFL
Sbjct:   263 KNMEVDVQAMKRAISRNTAMLVCSTPQFPHGVMDPVPEVAKLAVRYKIPLHVDACLGGFL 322

Query:   316 APFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
               FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSVV+Y + KY+  Q+FV +DW
Sbjct:   323 IVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRTYQFFVGADW 382

Query:   375 PGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW 430
              GG Y            IIA CWAA+M+FG     EA   I     F  KS L+N+ +++
Sbjct:   383 QGGVYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARF-LKSELENIKNIF 441

Query:   431 LY 432
             ++
Sbjct:   442 IF 443

GO:0001553 "luteinization" evidence=IMP

GO:0001570 "vasculogenesis" evidence=IMP

GO:0001822 "kidney development" evidence=IMP

GO:0003824 "catalytic activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0006672 "ceramide metabolic process" evidence=ISO

GO:0006807 "nitrogen compound metabolic process" evidence=IMP

GO:0006915 "apoptotic process" evidence=ISO

GO:0007283 "spermatogenesis" evidence=IMP

GO:0008117 "sphinganine-1-phosphate aldolase activity" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IMP

GO:0008210 "estrogen metabolic process" evidence=IMP

GO:0008585 "female gonad development" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0010761 "fibroblast migration" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IMP

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IMP

GO:0048705 "skeletal system morphogenesis" evidence=IMP

GO:0060021 "palate development" evidence=IMP

GO:0060325 "face morphogenesis" evidence=IMP

ZFIN|ZDB-GENE-070410-24 sgpl1 "sphingosine-1-phosphate lyase 1" [Danio rerio (taxid:7955)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 197/395 (49%), Positives = 257/395 (65%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +NSQ    EPWQI+A T  S L  V++ + LF ++     SLT ++KK+ F++ RKIP +
Sbjct:    25 VNSQCAGLEPWQIIAATLLSTLGVVWLKDFLFQQE-----SLTSRVKKQFFRIIRKIPFI 79

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
                ++ +  K        +     G+ Y   LP+QG    ++L+ +  Y      +W  G
Sbjct:    80 GASIQNQLNKALDDMSMSLCTLKEGMSYTKLLPAQGLTHKQLLDKIREYETLSEVNWAKG 139

Query:   136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
             +VSGAVY+  + L DLL +V+G  ++TNPLHPDIFPGV KMEAEV++M   +FNGGP++C
Sbjct:   140 KVSGAVYWGDEKLTDLLVKVYGEFAWTNPLHPDIFPGVRKMEAEVVRMTCALFNGGPDSC 199

Query:   196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
             G +TSGGTESI+MACKAYRD A E +GI  PEI+ P + H AFDKAA+YFGMK+ H+ L 
Sbjct:   200 GTVTSGGTESILMACKAYRDMAHE-RGIKHPEIIAPISVHAAFDKAAHYFGMKLIHVPLD 258

Query:   256 S-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
             + +  VD+ A++ AIT NT MLV S P FP+G MD +  +AKL  KY IP HVD CLGGF
Sbjct:   259 NKTMKVDVKAMRRAITKNTAMLVCSAPQFPHGIMDPVEEVAKLAVKYNIPFHVDACLGGF 318

Query:   315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
             L  FM  AG+ L PFDF + GVTSIS DTHKYG+ PKGSSVVLY + K++H QYFV  DW
Sbjct:   319 LIVFMEKAGFKLAPFDFRVKGVTSISADTHKYGYAPKGSSVVLYSNRKFRHYQYFVAPDW 378

Query:   375 PGGNYXXXXXXXXXXXXIIATCWAAMMYFGFEAQV 409
              GG Y            IIA CWA MM+ G +  V
Sbjct:   379 QGGIYASPSMAGSRPGGIIAACWATMMHMGEKGYV 413

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|F1SUB2 SGPL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 203/426 (47%), Positives = 275/426 (64%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++A +    L  V+VY+ +F   P   +SL  + KKR  KL RK+P +
Sbjct:    30 VNGHCTKYEPWQLIAWSVVWTLLIVWVYKFVFQ--P---ESLWSRFKKRCVKLIRKMPVI 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGL----EYFLELPSQGRNRLEILELVSNYLARGHYD 131
              +K++++  K     +DDI +N + L    EY   LPSQG +   +LE +  Y +     
Sbjct:    85 GRKIQDKLNKT----KDDISKNMSFLKVDKEYVKALPSQGLSPAAVLEKLKEYSSLD-VS 139

Query:   132 WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191
             W+ G+ SGAVY  +++L +LL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGG
Sbjct:   140 WQEGKASGAVYSGEKELTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRMACSLFNGG 199

Query:   192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251
             P++CGC+TSGGTESI+MACKAYR+ A E  GI  PEIV P +AH AFDKAANYFGMK+  
Sbjct:   200 PDSCGCVTSGGTESILMACKAYRELAFEN-GIKTPEIVAPQSAHAAFDKAANYFGMKIIR 258

Query:   252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
             + L     VD+ A++ AI+ NT MLV S P +P+G +D +  +AKL  KY IP+HVD CL
Sbjct:   259 VPLNKMMEVDIRAMRRAISRNTAMLVCSTPQYPHGVIDPVPEVAKLAVKYKIPLHVDACL 318

Query:   312 GGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370
             GGFL  FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSVVLY D KY++ Q+FV
Sbjct:   319 GGFLIVFMEKAGYPLEQPFDFRVKGVTSISADTHKYGYAPKGSSVVLYSDKKYRNYQFFV 378

Query:   371 TSDWPGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNL 426
              +DW GG Y            I A CWAA+MYFG     EA   I     F  K+ L+N+
Sbjct:   379 ATDWQGGIYASPTMAGSRPGGISAACWAALMYFGENGYVEATKQIIKTTRF-LKAELENI 437

Query:   427 SDLWLY 432
               ++++
Sbjct:   438 KGIFVF 443

GO:0060325 "face morphogenesis" evidence=IEA

GO:0060021 "palate development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008210 "estrogen metabolic process" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0001553 "luteinization" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

UNIPROTKB|O95470 SGPL1 "Sphingosine-1-phosphate lyase 1" [Homo sapiens (taxid:9606)]

 Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
 Identities = 203/426 (47%), Positives = 276/426 (64%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++A +    L  V+ YE +F   P   +SL  + KK+ FKL RK+P +
Sbjct:    30 VNGHCTKYEPWQLIAWSVVWTLLIVWGYEFVFQ--P---ESLWSRFKKKCFKLTRKMPII 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGL----EYFLELPSQGRNRLEILELVSNYLARGHYD 131
              +K++++  K     +DDI +N + L    EY   LPSQG +   +LE +  Y +   + 
Sbjct:    85 GRKIQDKLNKT----KDDISKNMSFLKVDKEYVKALPSQGLSSSAVLEKLKEYSSMDAF- 139

Query:   132 WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191
             W+ GR SG VY  ++ L +LL + +G  +++NPLHPDIFPG+ K+EAE++++   +FNGG
Sbjct:   140 WQEGRASGTVYSGEEKLTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGG 199

Query:   192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251
             P++CGC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AF+KAA+YFGMK+  
Sbjct:   200 PDSCGCVTSGGTESILMACKAYRDLAFE-KGIKTPEIVAPQSAHAAFNKAASYFGMKIVR 258

Query:   252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
             + LT    VD+ A++ AI+ NT MLV S P FP+G +D +  +AKL  KY IP+HVD CL
Sbjct:   259 VPLTKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACL 318

Query:   312 GGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370
             GGFL  FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSS+VLY D KY++ Q+FV
Sbjct:   319 GGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFV 378

Query:   371 TSDWPGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNL 426
              +DW GG Y            I A CWAA+M+FG     EA   I     F  KS L+N+
Sbjct:   379 DTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARF-LKSELENI 437

Query:   427 SDLWLY 432
               ++++
Sbjct:   438 KGIFVF 443

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0001553 "luteinization" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IEA

GO:0008210 "estrogen metabolic process" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0060021 "palate development" evidence=IEA

GO:0060325 "face morphogenesis" evidence=IEA

GO:0008117 "sphinganine-1-phosphate aldolase activity" evidence=NAS

GO:0030149 "sphingolipid catabolic process" evidence=NAS

GO:0006915 "apoptotic process" evidence=IDA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0006672 "ceramide metabolic process" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006665 "sphingolipid metabolic process" evidence=TAS

GO:0030148 "sphingolipid biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|E2RME9 SGPL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
 Identities = 202/426 (47%), Positives = 274/426 (64%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++A +    L  V+VY+ +F   P   +SL  + KKR FKL RK+P +
Sbjct:    30 VNGHCTKYEPWQLIAWSVLCTLLIVWVYDFVFQ--P---ESLWSRFKKRCFKLIRKMPII 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGL----EYFLELPSQGRNRLEILELVSNYLARGHYD 131
              +K++++  K     +DDI +N + L    EY   LPSQG +   +LE +  Y +   + 
Sbjct:    85 GRKIQDKVNKT----KDDISKNMSFLKVDKEYVKALPSQGLSASAVLEKLKEYSSMDIF- 139

Query:   132 WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191
             W+ G+ SGAVY   ++L +LL + +G  +++NPLHPDIFPG+ K+EAE++++   +FNGG
Sbjct:   140 WQEGKASGAVYSGAEELTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGG 199

Query:   192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251
             P++CGC+TSGGTESI+MACKAYRD A E  GI  PEIV P +AH AFDKAANYFGMK+  
Sbjct:   200 PDSCGCVTSGGTESILMACKAYRDLAFEN-GIKTPEIVAPQSAHAAFDKAANYFGMKIIR 258

Query:   252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
             + L     VD+ A++ AI+ NT MLV S P FP+G +D +  +AKL  +Y IP+HVD CL
Sbjct:   259 VPLNKMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAVRYKIPLHVDACL 318

Query:   312 GGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370
             GGFL  FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSV+LY D KY+  Q+FV
Sbjct:   319 GGFLIVFMEKAGYPLEQPFDFRVKGVTSISADTHKYGYAPKGSSVLLYSDKKYRSHQFFV 378

Query:   371 TSDWPGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNL 426
              +DW GG Y            I A CWAA+M+FG     EA   I     F  KS L+ +
Sbjct:   379 ATDWQGGIYASPTIAGSRPGGISAACWAALMHFGESGYVEATKQIIKTTRF-LKSELETI 437

Query:   427 SDLWLY 432
               ++++
Sbjct:   438 KGIFVF 443

GO:0060325 "face morphogenesis" evidence=IEA

GO:0060021 "palate development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008210 "estrogen metabolic process" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0001553 "luteinization" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

UNIPROTKB|A5D788 SGPL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
 Identities = 199/422 (47%), Positives = 269/422 (63%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++  +    L  V+VYE +F   P   +SL  + KKR FKL RK+P +
Sbjct:    30 VNGHCTKYEPWQLIVWSVVWTLLIVWVYEFVFQ--P---ESLWSRFKKRCFKLIRKMPII 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
              +K++++  K  +     +       +Y   LPSQG +   +LE +  Y ++    W+ G
Sbjct:    85 GRKIQDKLNKTKEDISKSMTFLKVDQDYVKALPSQGLSPAAVLEKLKEYSSKDVL-WQEG 143

Query:   136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
             + SGAVY  +++L DLL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGGP++C
Sbjct:   144 KASGAVYSGEKELTDLLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRMACSLFNGGPDSC 203

Query:   196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
             GC+TSGGTESI+MACKAYR+ A E  GI  PEIV P +AH AFDKAA+YFGMK+  + L 
Sbjct:   204 GCVTSGGTESILMACKAYRELAFEN-GIKTPEIVAPQSAHAAFDKAASYFGMKIIRVPLN 262

Query:   256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315
                 VD+ A++ AI+ NT MLV S P FP+G +D I  +AKL  KY IP+HVD CLGGFL
Sbjct:   263 KMMEVDVRAMRRAISRNTAMLVCSAPQFPHGVIDPIPEVAKLAVKYKIPLHVDACLGGFL 322

Query:   316 APFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
               FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSV+LY D KY+  Q+FV +DW
Sbjct:   323 IVFMEKAGYPLEQPFDFRVKGVTSISADTHKYGYAPKGSSVLLYSDKKYRSYQFFVATDW 382

Query:   375 PGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW 430
              GG Y            I A CWA++MYFG     EA   I     F  KS L+N+  ++
Sbjct:   383 QGGIYASPTIAGSRPGGISAACWASLMYFGESGYVEATKQIIKTTRF-LKSELENIKGIF 441

Query:   431 LY 432
             ++
Sbjct:   442 VF 443

GO:0060325 "face morphogenesis" evidence=IEA

GO:0060021 "palate development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008210 "estrogen metabolic process" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0001553 "luteinization" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

RGD|628599 Sgpl1 "sphingosine-1-phosphate lyase 1" [Rattus norvegicus (taxid:10116)]

 Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
 Identities = 198/421 (47%), Positives = 271/421 (64%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++A +    L  V+VYE +F   P   +SL  + K ++F+L RK+P +
Sbjct:    30 VNGYCTKYEPWQLIAGSVLCTLLVVWVYELIFQ--P---ESLWSRFKNKLFRLIRKMPFI 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
              +K++++  K  K    ++       +Y   LP+QG +  E+LE +  Y +   + W+ G
Sbjct:    85 GRKIQQQLTKAKKDLVKNMPFLKLDKDYVKTLPAQGLSTAEVLERLKEYSSMDVF-WQEG 143

Query:   136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
             + SGAVY  +  L +LL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGGP++C
Sbjct:   144 KASGAVYSGEPKLTELLVQAYGEFTWSNPLHPDIFPGLRKLEAEIVRMTCSLFNGGPDSC 203

Query:   196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
             GC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AFDKAA+YFGMK+  +   
Sbjct:   204 GCVTSGGTESILMACKAYRDLALE-KGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVAQK 262

Query:   256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315
              +  VD+ A++ AI+ NT MLV S P FP+G +D I  +AKL  KY IP HVD CLGGFL
Sbjct:   263 KNMEVDVRAMKRAISRNTAMLVCSAPQFPHGVIDPIPEVAKLAVKYKIPFHVDACLGGFL 322

Query:   316 APFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
               FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSVV+Y + KY+  Q+FV +DW
Sbjct:   323 IVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRKYQFFVDADW 382

Query:   375 PGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW 430
              GG Y            IIA CWAA+M+FG     EA   I     F  KS L+N+ +++
Sbjct:   383 QGGIYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARF-LKSELENIKNIF 441

Query:   431 L 431
             +
Sbjct:   442 I 442

GO:0001553 "luteinization" evidence=IEA;ISO

GO:0001570 "vasculogenesis" evidence=IEA;ISO

GO:0001822 "kidney development" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006672 "ceramide metabolic process" evidence=ISO;ISS

GO:0006807 "nitrogen compound metabolic process" evidence=ISO

GO:0006915 "apoptotic process" evidence=ISO;ISS

GO:0007283 "spermatogenesis" evidence=IEA;ISO

GO:0008117 "sphinganine-1-phosphate aldolase activity" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IEA;ISO

GO:0008210 "estrogen metabolic process" evidence=IEA;ISO

GO:0008585 "female gonad development" evidence=ISO

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0010761 "fibroblast migration" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA;ISO

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IEA;ISO

GO:0040014 "regulation of multicellular organism growth" evidence=IEA;ISO

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA;ISO

GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO

GO:0060021 "palate development" evidence=IEA;ISO

GO:0060325 "face morphogenesis" evidence=IEA;ISO

UNIPROTKB|Q8CHN6 Sgpl1 "Sphingosine-1-phosphate lyase 1" [Rattus norvegicus (taxid:10116)]

 Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
 Identities = 198/421 (47%), Positives = 271/421 (64%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N      EPWQ++A +    L  V+VYE +F   P   +SL  + K ++F+L RK+P +
Sbjct:    30 VNGYCTKYEPWQLIAGSVLCTLLVVWVYELIFQ--P---ESLWSRFKNKLFRLIRKMPFI 84

Query:    76 RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG 135
              +K++++  K  K    ++       +Y   LP+QG +  E+LE +  Y +   + W+ G
Sbjct:    85 GRKIQQQLTKAKKDLVKNMPFLKLDKDYVKTLPAQGLSTAEVLERLKEYSSMDVF-WQEG 143

Query:   136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195
             + SGAVY  +  L +LL + +G  +++NPLHPDIFPG+ K+EAE+++M   +FNGGP++C
Sbjct:   144 KASGAVYSGEPKLTELLVQAYGEFTWSNPLHPDIFPGLRKLEAEIVRMTCSLFNGGPDSC 203

Query:   196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
             GC+TSGGTESI+MACKAYRD A E KGI  PEIV P +AH AFDKAA+YFGMK+  +   
Sbjct:   204 GCVTSGGTESILMACKAYRDLALE-KGIKTPEIVAPESAHAAFDKAAHYFGMKIVRVAQK 262

Query:   256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315
              +  VD+ A++ AI+ NT MLV S P FP+G +D I  +AKL  KY IP HVD CLGGFL
Sbjct:   263 KNMEVDVRAMKRAISRNTAMLVCSAPQFPHGVIDPIPEVAKLAVKYKIPFHVDACLGGFL 322

Query:   316 APFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
               FM  AGYPL  PFDF + GVTSIS DTHKYG+ PKGSSVV+Y + KY+  Q+FV +DW
Sbjct:   323 IVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRKYQFFVDADW 382

Query:   375 PGGNYXXXXXXXXXXXXIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW 430
              GG Y            IIA CWAA+M+FG     EA   I     F  KS L+N+ +++
Sbjct:   383 QGGIYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARF-LKSELENIKNIF 441

Query:   431 L 431
             +
Sbjct:   442 I 442

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|F1NMD8 ASCC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
 Identities = 194/394 (49%), Positives = 258/394 (65%)

Query:    16 INSQFVNKEPWQIVAMTTASVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAV 75
             +N+     EPWQ+V +T +S L TV+++  LF      ++SLT + KK+ F+L RK+P V
Sbjct:    21 VNAHCDGLEPWQLVGLTFSSTLLTVWLHGFLFQ-----SESLTSRTKKQFFRLLRKMPFV 75

Query:    76 ----RKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYD 131
                 +KK++E    V       +K      +Y   LP QG ++ E+L+ +  Y ++G   
Sbjct:    76 GAIIQKKIDEALNDVTSSLSF-LKDEK---DYIKVLPEQGMSQPEVLQKMKEYSSKGDVR 131

Query:   132 WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191
             W+ G+VSG VY  ++ L  LL +V+   +++NPLHPDIFPG+ KMEAEV+++   +F+GG
Sbjct:   132 WEDGKVSGTVYSGEEKLTHLLVKVYEEFAWSNPLHPDIFPGLRKMEAEVVRIACSLFHGG 191

Query:   192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251
             P +CG MTSGGTESI+MACKAYRD A E +GI  PE+++P +AH AFDKAA+YFGMK+ H
Sbjct:   192 PSSCGAMTSGGTESILMACKAYRDLAYE-RGIKHPEMLVPVSAHAAFDKAAHYFGMKLIH 250

Query:   252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
             I LT +  VD+ A++  I+ NT MLV S P FP+G MD I  +A+L  KY IP HVD CL
Sbjct:   251 IPLTKAMEVDVQAMRRTISKNTAMLVCSAPQFPHGIMDPIEEVAELAVKYKIPFHVDACL 310

Query:   312 GGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370
             GGFL  FM  AG+PL   FDF + GVTSIS DTHKYG+ PKGSSVVLY D KY+  QYFV
Sbjct:   311 GGFLIVFMEKAGFPLKRLFDFRVKGVTSISADTHKYGYAPKGSSVVLYSDKKYRSYQYFV 370

Query:   371 TSDWPGGNYXXXXXXXXXXXXIIATCWAAMMYFG 404
               DW GG Y            IIA CWA +M+ G
Sbjct:   371 APDWQGGIYASPSIAGSRAGGIIAACWATLMHMG 404

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0001553 "luteinization" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0001822 "kidney development" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=IEA

GO:0008210 "estrogen metabolic process" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0033327 "Leydig cell differentiation" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0060021 "palate development" evidence=IEA

GO:0060325 "face morphogenesis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6M0Y7	MFNA_METMP	4, ., 1, ., 1, ., 2, 5	0.3028	0.6114	0.6927	yes	N/A
Q52RG7	SGPL_ORYSJ	4, ., 1, ., 2, ., 2, 7	0.4156	0.7609	0.6141	yes	N/A
Q9Y194	SGPL_CAEEL	4, ., 1, ., 2, ., 2, 7	0.4463	0.9034	0.7119	yes	N/A
Q8R0X7	SGPL1_MOUSE	4, ., 1, ., 2, ., 2, 7	0.4928	0.9402	0.7200	yes	N/A
Q8TV92	MFNA_METKA	4, ., 1, ., 1, ., 2, 5	0.3321	0.6275	0.7338	yes	N/A
O95470	SGPL1_HUMAN	4, ., 1, ., 2, ., 2, 7	0.4906	0.9310	0.7130	yes	N/A
Q54RV9	SGPL_DICDI	4, ., 1, ., 2, ., 2, 7	0.3944	0.8597	0.7083	yes	N/A
C5A2X8	MFNA_THEGJ	4, ., 1, ., 1, ., 2, 5	0.3333	0.6252	0.7101	yes	N/A
Q5WUR6	SGPL_LEGPL	4, ., 1, ., 2, ., 2, 7	0.3388	0.9149	0.6578	yes	N/A
Q5R4G0	SGPL1_PONAB	4, ., 1, ., 2, ., 2, 7	0.4882	0.9310	0.7130	yes	N/A
Q12VA2	MFNA_METBU	4, ., 1, ., 1, ., 2, 5	0.31	0.6505	0.7467	yes	N/A
Q9UZD5	MFNA_PYRAB	4, ., 1, ., 1, ., 2, 5	0.3212	0.7264	0.8229	yes	N/A
Q8U1P6	MFNA_PYRFU	4, ., 1, ., 1, ., 2, 5	0.3290	0.6919	0.8113	yes	N/A
A5ULW4	MFNA_METS3	4, ., 1, ., 1, ., 2, 5	0.3322	0.6574	0.7428	yes	N/A
Q5ZTI6	SGPL_LEGPH	4, ., 1, ., 2, ., 2, 7	0.3388	0.9149	0.6622	yes	N/A
A6URB4	MFNA_METVS	4, ., 1, ., 1, ., 2, 5	0.3014	0.6068	0.6875	yes	N/A
Q9V7Y2	SGPL_DROME	4, ., 1, ., 2, ., 2, 7	0.5508	0.9126	0.7284	yes	N/A
Q2NHY7	MFNA_METST	4, ., 1, ., 1, ., 2, 5	0.3125	0.6574	0.7352	yes	N/A
Q5X3A8	SGPL_LEGPA	4, ., 1, ., 2, ., 2, 7	0.3411	0.9149	0.6578	yes	N/A
Q05567	SGPL_YEAST	4, ., 1, ., 2, ., 2, 7	0.4468	0.8413	0.6213	yes	N/A
O58679	MFNA_PYRHO	4, ., 1, ., 1, ., 2, 5	0.3322	0.6919	0.7859	yes	N/A
Q8CHN6	SGPL1_RAT	4, ., 1, ., 2, ., 2, 7	0.4869	0.9379	0.7183	yes	N/A
Q9C509	SGPL_ARATH	4, ., 1, ., 2, ., 2, 7	0.4074	0.7770	0.6213	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.1.2.27	0.914
3rd Layer	4.1.1	LOW CONFIDENCE prediction!
3rd Layer	4.1.2	0.921

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	435
COG0076	460	COG0076, GadB, Glutamate decarboxylase and related	1e-83
cd06450	345	cd06450, DOPA_deC_like, DOPA decarboxylase family	7e-81
TIGR03812	373	TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase	3e-63
PRK13520	371	PRK13520, PRK13520, L-tyrosine decarboxylase; Prov	1e-60
TIGR01788	431	TIGR01788, Glu-decarb-GAD, glutamate decarboxylase	1e-26
pfam00282	373	pfam00282, Pyridoxal_deC, Pyridoxal-dependent deca	2e-18
PRK02769	380	PRK02769, PRK02769, histidine decarboxylase; Provi	1e-13
COG1104	386	COG1104, NifS, Cysteine sulfinate desulfinase/cyst	6e-13
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	1e-12
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	7e-11
PLN03032	374	PLN03032, PLN03032, serine decarboxylase; Provisio	3e-09
TIGR02006	402	TIGR02006, IscS, cysteine desulfurase IscS	5e-07
cd06453	373	cd06453, SufS_like, Cysteine desulfurase (SufS)-li	8e-07
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	8e-07
TIGR03402	379	TIGR03402, FeS_nifS, cysteine desulfurase NifS	8e-07
PLN02651	364	PLN02651, PLN02651, cysteine desulfurase	1e-06
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	3e-06
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	4e-06
TIGR03235	353	TIGR03235, DNA_S_dndA, cysteine desulfurase DndA	7e-06
PRK14012	404	PRK14012, PRK14012, cysteine desulfurase; Provisio	9e-06
PLN02590	539	PLN02590, PLN02590, probable tyrosine decarboxylas	2e-05
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	2e-05
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	3e-05
TIGR03811	608	TIGR03811, tyr_de_CO2_Ent, tyrosine decarboxylase,	5e-05
PRK02948	381	PRK02948, PRK02948, cysteine desulfurase; Provisio	5e-05
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	1e-04
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	1e-04
pfam01041	362	pfam01041, DegT_DnrJ_EryC1, DegT/DnrJ/EryC1/StrS a	3e-04
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	3e-04
TIGR03799	522	TIGR03799, NOD_PanD_pyr, putative pyridoxal-depend	3e-04
TIGR01979	403	TIGR01979, sufS, cysteine desulfurases, SufSfamily	3e-04
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	4e-04
TIGR03403	382	TIGR03403, nifS_epsilon, cysteine desulfurase, Nif	5e-04
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	7e-04
PRK07503	403	PRK07503, PRK07503, methionine gamma-lyase; Provis	0.001
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	0.002
COG0399	374	COG0399, WecE, Predicted pyridoxal phosphate-depen	0.004
cd00616	352	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid s	0.004
PRK05994	427	PRK05994, PRK05994, O-acetylhomoserine aminocarbox	0.004

>gnl|CDD|223154 COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

 Score =  263 bits (675), Expect = 1e-83
 Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 19/346 (5%)

Query: 72  IPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYD 131
           I  +  K    + + +      +      L      P +G    E+L+ ++  L +    
Sbjct: 1   IDGLIDKDMLNSKRYSGDSLSPLFGA---LSDSRMAPEKGEPLEEVLDELAELLIKDE-L 56

Query: 132 WKHGRVSGAVYYYQQDLV-DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG 190
           +  G     +  +    V  +  E+       N   PD  P   ++E  V+ M + +   
Sbjct: 57  YLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGA 116

Query: 191 GPETCGCMTSGGTESIMMACKAYRDYAREE------KGISLPEIVLPTTAHPAFDKAANY 244
             E  G  TSGGTE+ ++A  A R+  R+       K    P IV   TAH +F+KAA Y
Sbjct: 117 PEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY 176

Query: 245 FGMKVKHIRLTSS-YTVDLAALQSAITGNTVM--LVGSMPNFPYGTMDDIGAIAKLGEKY 301
            G+ ++ +    + Y +D+ AL+ AI  NT+   +VG+      G++DDI  +A + E+Y
Sbjct: 177 LGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY 236

Query: 302 GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL 361
           GI +HVD   GGFL PF+     P   +DF L GV SI+VD HKYG  P G  VVL+RD 
Sbjct: 237 GIWLHVDAAFGGFLLPFLE----PDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDE 292

Query: 362 -KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406
              +    F     PGG   + ++ GSR G      +A +   G E
Sbjct: 293 EALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGRE 338

Length = 460

>gnl|CDD|99743 cd06450, DOPA_deC_like, DOPA decarboxylase family

 Score =  252 bits (647), Expect = 7e-81
 Identities = 83/248 (33%), Positives = 114/248 (45%), Gaps = 24/248 (9%)

Query: 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET- 194
            ++G V       + L        +       D  P   +MEAEV+   A++F    E  
Sbjct: 1   FLAGFVTTMDPPALLLEMLTSAKNAIDFT--WDESPAATEMEAEVVNWLAKLFGLPSEDA 58

Query: 195 CGCMTSGGTESIMMACKAYRDYAREE------KGISLPEIVLPTTAHPAFDKAANYFGMK 248
            G  TSGG+ES ++A  A RD AR+       +GI    IV    AH + +KAA Y  +K
Sbjct: 59  DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVK 118

Query: 249 VKHIRLTSSYTVDLAALQSAI------TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG 302
           V+ + +     +D  AL++AI        N +M+V +      G +D +  IA L EKY 
Sbjct: 119 VRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYD 178

Query: 303 IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK 362
           + +HVD   GGFL PF           DF +  V SISVD HKYG  P G S VL R LK
Sbjct: 179 LWLHVDAAYGGFLLPFPEPRHL-----DFGIERVDSISVDPHKYGLVPLGCSAVLVRALK 233

Query: 363 YKHCQYFV 370
                +  
Sbjct: 234 ----LWAT 237

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine. Length = 345

>gnl|CDD|234361 TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase MnfA

 Score =  207 bits (530), Expect = 3e-63
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 18/297 (6%)

Query: 116 EILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK 175
           E+LE +  Y +     +  GR+ G++      +     + + +   TN   P +FPG  K
Sbjct: 4   EVLEELKEYRSEDL-KYSDGRILGSMCTNPHPIA---VKAYDMFIETNLGDPGLFPGTKK 59

Query: 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAH 235
           +E EV+     + +  P+  G + SGGTE+ + A +A ++ AREEK    P I++P +AH
Sbjct: 60  IEEEVVGSLGNLLHL-PDAYGYIVSGGTEANIQAVRAAKNLAREEKRT--PNIIVPESAH 116

Query: 236 PAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA 295
            +F+KAA   G+++++  L   YTVD+  ++  I  NT+ +VG       G +DDI  ++
Sbjct: 117 FSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELS 176

Query: 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSV 355
           K+  + GI +HVD   GGF+ PF+   GY  PPFDFSLPGV SI++D HK G +P  +  
Sbjct: 177 KIALENGIYLHVDAAFGGFVIPFLK-KGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGG 235

Query: 356 VLYRDLKYKHC----QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ 408
           +L+R   Y         ++T           +++G+RSG   A  +A + Y G E  
Sbjct: 236 ILFRSKSYLKYLSVDAPYLTVK------KQATITGTRSGASAAATYAVIKYLGREGY 286

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 373

>gnl|CDD|237409 PRK13520, PRK13520, L-tyrosine decarboxylase; Provisional

 Score =  200 bits (512), Expect = 1e-60
 Identities = 94/269 (34%), Positives = 142/269 (52%), Gaps = 28/269 (10%)

Query: 162 TNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK 221
           TN   P +FPG  K+E E ++M   +    P+  G +TSGGTE+ + A +A R+ A+ EK
Sbjct: 46  TNLGDPGLFPGTAKLEEEAVEMLGELL-HLPDAYGYITSGGTEANIQAVRAARNLAKAEK 104

Query: 222 GISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMP 281
               P IV+P +AH +FDKAA+  G++++   L   Y VD+ A++  I  NT+ +VG   
Sbjct: 105 ----PNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAG 160

Query: 282 NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV 341
               G +D I  ++K+  + GI +HVD   GGF+ PF+       P FDFSLPGV SI++
Sbjct: 161 TTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDP----PNFDFSLPGVDSITI 216

Query: 342 DTHKYGFTPKGSSVVLYRDLKYKHC-----QYFVTSDWPGGNYGSPSVSGSRSGGIIATC 396
           D HK G  P  +  +L+RD  Y         Y  +           +++G+RSG  +A  
Sbjct: 217 DPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSKK-------QATLTGTRSGAGVAAT 269

Query: 397 WAAMMYFGFEAQVWICVRYHFNYKSCLQN 425
           +A M Y G E        Y    + C++N
Sbjct: 270 YAVMKYLGREG-------YRKVVERCMEN 291

Length = 371

>gnl|CDD|130848 TIGR01788, Glu-decarb-GAD, glutamate decarboxylase

 Score =  110 bits (277), Expect = 1e-26
 Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 42/287 (14%)

Query: 168 DIFPGVCKMEAEVIKMCARMFNG---GPETCGCMTSGGTESIM---MACK-AYRDYAREE 220
           D +P   ++E   + M A +++      E  G  T G +E+IM   +A K  +R      
Sbjct: 73  DEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132

Query: 221 -KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS-YTVDLAALQSAITGNTVMLVG 278
            K    P +V+ +     ++K A YF ++++ + +    Y +D   +  A+  NT+ +V 
Sbjct: 133 GKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVC 192

Query: 279 SMPNFPYGTMDDIGAIAKLGEKYG------IPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332
            +     G  +D+ A+    ++Y       IP+HVD   GGF+APF+    YP   +DF 
Sbjct: 193 ILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFV----YPDLEWDFR 248

Query: 333 LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK------HCQYFVTSDWPGGNYGSPSVSG 386
           LP V SI+V  HKYG    G   V++RD +        H  Y       GG+  + +++ 
Sbjct: 249 LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYL------GGDEPTFTLNF 302

Query: 387 SRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYL 433
           SR    +   +   +  G E            Y+  +QN  D+  YL
Sbjct: 303 SRPANQVIAQYYNFLRLGREG-----------YRKIMQNSLDVARYL 338

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA). Length = 431

>gnl|CDD|215836 pfam00282, Pyridoxal_deC, Pyridoxal-dependent decarboxylase conserved domain

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 54/265 (20%), Positives = 90/265 (33%), Gaps = 45/265 (16%)

Query: 147 DLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARM------FNGGPETCGCMTS 200
               LL ++       N    +  P   ++E  V+   A+M      F G  E  G +  
Sbjct: 51  SYPSLLGDMLSDAINCNGFTWESSPACTELENVVMDWLAKMLGLPKEFLGSGEGGGVLQG 110

Query: 201 GGTESIMMACKAYRDYAREEKGISLPE----IVLPTT--AHPAFDKAANYFGMKVKHIRL 254
           G +ES ++A  A R         +       +V  T+  AH + +KAA   G++++ I  
Sbjct: 111 GSSESNLLALLAARTKWIRRMKAAGKPSLGKLVAYTSDQAHSSIEKAALIAGVELREIPT 170

Query: 255 TSSYTVDLAALQSAI-----TGNTVMLVGSMPNF---PYGTMDDIGAIAKLGEKYGIPVH 306
             +  +    L+ AI      G     V           G  D +  +  +  KY + +H
Sbjct: 171 DENGKMRGMDLEKAIEEDKENGLIPFFVC--ATLGTTGSGAFDPLQELGDICNKYDLWLH 228

Query: 307 VDCCLGG--FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD---- 360
           VD    G  F+ P           + F +    S S + HK+       S +  RD    
Sbjct: 229 VDAAYAGSAFICPEFR-------HWLFGIERADSFSFNPHKWMLVLLDCSALWVRDKGAL 281

Query: 361 ----------LKYKHCQYFVTSDWP 375
                     L +   Q  V  D+ 
Sbjct: 282 QQALQFNPEYLGHNDKQSDVAVDYG 306

Length = 373

>gnl|CDD|235068 PRK02769, PRK02769, histidine decarboxylase; Provisional

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 34/245 (13%)

Query: 175 KMEAEVIKMCARMFN-GGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVL--P 231
             E +V+   A +F     E+ G +T+GGTE  +  C   R+          P+  L   
Sbjct: 65  DFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL--------FPDGTLYYS 116

Query: 232 TTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNT---VMLVGSMPNFPYGTM 288
              H +  K A    +K + I    +  +D   L S I  N     ++  ++     G +
Sbjct: 117 KDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI 176

Query: 289 DDIGAIAKLGEKYGIP---VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK 345
           D+I  I ++ +K GI    +H D  L G + PF++      PPF F+  G+ SI++  HK
Sbjct: 177 DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN----NPPPFSFA-DGIDSIAISGHK 231

Query: 346 YGFTPKGSSVVL----YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM 401
           +  +P    +VL    Y +       Y  + D         ++SGSR+G      WAA+ 
Sbjct: 232 FIGSPMPCGIVLAKKKYVERISVDVDYIGSRD--------QTISGSRNGHTALLLWAAIR 283

Query: 402 YFGFE 406
             G +
Sbjct: 284 SLGSK 288

Length = 380

>gnl|CDD|224029 COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

 Score = 69.5 bits (171), Expect = 6e-13
 Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 29/171 (16%)

Query: 199 TSGGTESIMMACK-AYRDYAREEKGISLPEIVLPTTAHPAFDKAANY---FGMKVKHIRL 254
           TSG TES  +A K A   Y   +KG     I+     HPA      Y    G +V ++ +
Sbjct: 67  TSGATESNNLAIKGAALAYRNAQKG---KHIITSAIEHPAVLNTCRYLERQGFEVTYLPV 123

Query: 255 TSSYTVDLAALQSAITGNT----VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCC 310
            S+  VDL  L+ A+  +T    +M   +      GT+  I  I ++ ++ GI  HVD  
Sbjct: 124 DSNGLVDLEQLEEALRPDTILVSIMHANNE----TGTIQPIAEIGEICKERGILFHVDA- 178

Query: 311 LGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKGSSVVLYRD 360
                            P D    GV  +S   HK  G  PKG   +  R 
Sbjct: 179 ----------VQAVGKIPIDLEELGVDLLSFSAHKFGG--PKGIGALYVRP 217

Length = 386

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 21/178 (11%)

Query: 185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDK 240
           AR  N         T G TE++ +  +      +        EIV+    H +    + +
Sbjct: 76  ARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGD-----EIVVSDLEHHSNIVPWQE 130

Query: 241 AANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300
            A   G KV+ I L     +DL AL+  IT  T ++  S  +   GT++ +  IA+L  +
Sbjct: 131 LAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHE 190

Query: 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLY 358
           +G  V VD            A      P D    G   ++   HK+   P G   VLY
Sbjct: 191 HGALVLVDA-----------AQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIG-VLY 236

Length = 405

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 63.0 bits (154), Expect = 7e-11
 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 23/167 (13%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL 254
           TSG TE+I +   +     +        EI++    H A    + + A   G  V+ I +
Sbjct: 67  TSGTTEAINLVAISLGRSLKPGD-----EILVTEMEHHANLVPWQELAKRTGATVRVIPV 121

Query: 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
             +  +DL AL+  +T  T ++  +  +   GT++ +  I KL  +YG  V VD      
Sbjct: 122 DPNGLLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVEEIGKLAHEYGALVVVD------ 175

Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKGSSVVLYRD 360
                +A      P D    GV  ++   HK YG  P G  V+  R 
Sbjct: 176 -----AAQAVGHRPIDVQALGVDFLAFSGHKLYG--PTGIGVLYGRR 215

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|166673 PLN03032, PLN03032, serine decarboxylase; Provisional

 Score = 58.3 bits (141), Expect = 3e-09
 Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 53/265 (20%)

Query: 175 KMEAEVIKMCARMFNGGPE-------TCGCMTSGGTESIMMACKAYRDYAREEKGISLPE 227
           + E  V+   AR++    +       TCG  T G    I++         RE      P+
Sbjct: 66  QFEVGVLDWFARLWELEKDEYWGYITTCG--TEGNLHGILVG--------RE----VFPD 111

Query: 228 IVLPTT--AHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNT---VMLVGSMPN 282
            +L  +  +H +  KAA  + M+   +    S  +D   L+ A+  N     +L  ++  
Sbjct: 112 GILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGT 171

Query: 283 FPYGTMDDIGAIAKLGEKYGIP-----VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337
              G +DD+  I ++ ++ G       +H D  L G + PF+S A    P   F  P + 
Sbjct: 172 TVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRA----PEVTFRKP-IG 226

Query: 338 SISVDTHKYGFTPKGSSVVLYRDLKY-----KHCQYFVTSDWPGGNYGSPSVSGSRSGGI 392
           S+SV  HK+   P    V L R  K+     ++ +Y  + D         ++ GSR+G  
Sbjct: 227 SVSVSGHKFLGCPMPCGVALTR-KKHVKALSQNVEYLNSRD--------ATIMGSRNGHA 277

Query: 393 IATCWAAMM---YFGFEAQVWICVR 414
               W  +    Y G +  V  C+R
Sbjct: 278 PLYLWYTLRRKGYRGIKRDVQHCMR 302

Length = 374

>gnl|CDD|131061 TIGR02006, IscS, cysteine desulfurase IscS

 Score = 51.4 bits (123), Expect = 5e-07
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 23/159 (14%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLT 255
           TSG TES  +A K    + + +       I+   T H A      Y    G +V ++   
Sbjct: 70  TSGATESNNLAIKGIAHFYKSKGN----HIITSKTEHKAVLDTCRYLEREGFEVTYLPPK 125

Query: 256 SSYTVDLAALQSAITGNTVMLVGSMP-NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
           S+  +DL  L++AI  +T+ LV  M  N   G + DI AI ++  +  +  HVD      
Sbjct: 126 SNGLIDLEELKAAIRDDTI-LVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVD------ 178

Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKG 352
                +A      P + +   V  +S+  HK YG  PKG
Sbjct: 179 -----AAQSVGKIPINVNELKVDLMSISGHKIYG--PKG 210

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Protein synthesis, tRNA and rRNA base modification]. Length = 402

>gnl|CDD|99746 cd06453, SufS_like, Cysteine desulfurase (SufS)-like

 Score = 50.5 bits (122), Expect = 8e-07
 Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 21/136 (15%)

Query: 185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY 244
           AR  N         T   TE+I +           + G    EIV     H      +N 
Sbjct: 53  ARFINAPSPDEIIFTRNTTEAINLVAYGLG--RANKPG---DEIVTSVMEH-----HSNI 102

Query: 245 F---------GMKVKHIRLTSSYTVDLAALQSAITGNTVML-VGSMPNFPYGTMDDIGAI 294
                     G K+K + +     +DL AL+  +T  T ++ V  + N   GT++ +  I
Sbjct: 103 VPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNV-LGTINPVKEI 161

Query: 295 AKLGEKYGIPVHVDCC 310
            ++  + G+PV VD  
Sbjct: 162 GEIAHEAGVPVLVDGA 177

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine. Length = 373

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 50.5 bits (122), Expect = 8e-07
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 19/112 (16%)

Query: 198 MTSGGT---ESIMMACKAYRDYAREEKGISLPEIVLPTTAHP-AFDKAANYF---GMKVK 250
           M  G T   E+ +MA        R  K     ++++    HP   +    Y    G++V 
Sbjct: 134 MYDGATALAEAALMAV-------RITKR---KKVLVSGAVHPEYREVLKTYLKGQGIEVV 183

Query: 251 HIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG 302
            +        DL AL++A+  +T  +V   PNF +G ++D+  IA++    G
Sbjct: 184 EVPYEDG-VTDLEALEAAVDDDTAAVVVQYPNF-FGVIEDLEEIAEIAHAGG 233

Length = 447

>gnl|CDD|132443 TIGR03402, FeS_nifS, cysteine desulfurase NifS

 Score = 50.3 bits (121), Expect = 8e-07
 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 14/116 (12%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA--HPAFDKAANYF---GMKVKHIR 253
           TSGGTES   A K+    A+ EK      I+  TTA  HPA      +    G KV ++ 
Sbjct: 65  TSGGTESDNTAIKSAL-AAQPEKR----HII--TTAVEHPAVLSLCQHLEKQGYKVTYLP 117

Query: 254 LTSSYTVDLAALQSAITGNTVMLVGSM-PNFPYGTMDDIGAIAKLGEKYGIPVHVD 308
           +     +DL  L++AIT +T  LV  M  N   GT+  I  I ++ ++ G   H D
Sbjct: 118 VDEEGRLDLEELRAAITDDTA-LVSVMWANNETGTIFPIEEIGEIAKERGALFHTD 172

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403. Length = 379

>gnl|CDD|178257 PLN02651, PLN02651, cysteine desulfurase

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 27/161 (16%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLT 255
           TSG TES  +A K    + +++K      ++   T H     +  +    G +V ++ + 
Sbjct: 66  TSGATESNNLAIKGVMHFYKDKK----KHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK 121

Query: 256 SSYTVDLAALQSAITGNT----VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
           S   VDL  L +AI  +T    VM V    N   G +  +  I +L  +  +  H D   
Sbjct: 122 SDGLVDLDELAAAIRPDTALVSVMAV----NNEIGVIQPVEEIGELCREKKVLFHTDAA- 176

Query: 312 GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG 352
                    A G    P D    GV  +S+  HK    PKG
Sbjct: 177 --------QAVGK--IPVDVDDLGVDLMSISGHKIY-GPKG 206

Length = 364

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 15/145 (10%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL--T 255
           +TSG +++I +  +A  +            I++P    P +D  A + G++V+   L   
Sbjct: 101 LTSGCSQAIEICIEALANPGAN--------ILVPRPGFPLYDTRAAFSGLEVRLYDLLPE 152

Query: 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYG---TMDDIGAIAKLGEKYGIPVHVDCCLG 312
             + +DL  L+S     TV +V   P+ P G   + D +  IA++ EK GIP+  D   G
Sbjct: 153 KDWEIDLDGLESLADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYG 212

Query: 313 GFLAPFMSAAGYPLPPFDFSLPGVT 337
             +  F  A   P+  F   +P ++
Sbjct: 213 HMV--FGDAPFIPMASFASIVPVLS 235

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 15/118 (12%)

Query: 197 CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS 256
            +T+G  E++ +  +A  +           E+++P   +P ++ AA   G +V  + L  
Sbjct: 63  VVTNGAQEALSLLLRALLNPGD--------EVLVPDPTYPGYEAAARLAGAEVVPVPLDE 114

Query: 257 SYT--VDLAALQSAITGNT-VMLVGSMPNFPYG---TMDDIGAIAKLGEKYGIPVHVD 308
                +DL  L++A T  T ++ + + PN P G   + +++  +A+L +K+GI +  D
Sbjct: 115 EGGFLLDLELLEAAKTPKTKLLYLNN-PNNPTGAVLSEEELEELAELAKKHGILIISD 171

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|163191 TIGR03235, DNA_S_dndA, cysteine desulfurase DndA

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 22/166 (13%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLT 255
           TSG TES  +A         E+KG     I+     HPA  +        G  V ++ + 
Sbjct: 65  TSGATESNNLAILGLARAG-EQKGKK--HIITSAIEHPAVLEPIRALERNGFTVTYLPVD 121

Query: 256 SSYTVDLAALQSAITGNTVMLVGSMP-NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
            S  +D+  L  AI  +T +LV  M  N   G++  I  IA++ E +    HVD      
Sbjct: 122 ESGRIDVDELADAIRPDT-LLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVD------ 174

Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKGSSVVLYR 359
                +A        D S   +  IS   HK YG  PKG   ++ R
Sbjct: 175 -----AAQVVGKITVDLSADRIDLISCSGHKIYG--PKGIGALVIR 213

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase [DNA metabolism, Restriction/modification]. Length = 353

>gnl|CDD|184450 PRK14012, PRK14012, cysteine desulfurase; Provisional

 Score = 47.2 bits (113), Expect = 9e-06
 Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 23/159 (14%)

Query: 199 TSGGTESIMMACK-AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHIRL 254
           TSG TES  +A K A   Y ++ K      I+   T H A           G +V ++  
Sbjct: 72  TSGATESDNLAIKGAAHFYQKKGK-----HIITSKTEHKAVLDTCRQLEREGFEVTYLDP 126

Query: 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314
            S+  +DL  L++A+  +T+++     N   G + DI AI ++  + GI  HVD      
Sbjct: 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVD------ 180

Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKG 352
                +A      P D S   V  +S   HK YG  PKG
Sbjct: 181 -----AAQSVGKVPIDLSKLKVDLMSFSAHKIYG--PKG 212

Length = 404

>gnl|CDD|178200 PLN02590, PLN02590, probable tyrosine decarboxylase

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 31/231 (13%)

Query: 108 PSQGRNRLEILELVSNYLARGHYDWK------HGRVSGAVYYYQQDLVDLLTEVFGLTSY 161
           P +  +  E+L+ VS  +  G   W+      +   S +V  +  ++++    V G T  
Sbjct: 104 PERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWL 163

Query: 162 TNPLHPDIFPGVCKMEAEVIKMCARMF---NGGPETCGCMTSGGTESIMMACKAYRDYAR 218
           T+P   ++   V    A+++++        NGG    G +   G E++++   A RD   
Sbjct: 164 TSPAATELEIIVLDWLAKLLQLPDHFLSTGNGG----GVIQGTGCEAVLVVVLAARDRIL 219

Query: 219 EEKGISL-PEIVLPTT--AHPAFDKAANYFGMKVKHIRL-----TSSYTVDLAALQSAIT 270
           ++ G +L P++V+  +   H +F KA    G+  ++IRL     +++Y +   +L+ AI+
Sbjct: 220 KKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAIS 279

Query: 271 GNTVMLVGSMPNFPYGTM--------DDIGAIAKLGEKYGIPVHVDCCLGG 313
            +  +  G +P F   T+        D +  +  + +KYGI +HVD    G
Sbjct: 280 HD--LAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAG 328

Length = 539

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 17/121 (14%)

Query: 197 CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS 256
              SG   +I           R   G     I++P   +P++ +     G +V    L S
Sbjct: 69  VFGSGAGANIEALIFL----LRLNPG---DAILVPAPTYPSYIRIFRLAGGEVVRYPLYS 121

Query: 257 S--YTVDLAALQSAITGNT----VMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHV 307
           S  + +D  AL++A+   T    V+L  S P+ P GT+   +++  +  L +++ I + V
Sbjct: 122 SNDFHLDFDALEAALKEATEGNKVVLHTS-PHNPTGTVATLEELEKLLDLAKEHNILLLV 180

Query: 308 D 308
           D
Sbjct: 181 D 181

Length = 357

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRL-- 254
           TS G +++M+A +A             P  E+V  T   P    A    G +V  + L  
Sbjct: 90  TSSGVQALMLAAQALVG----------PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDF 139

Query: 255 -TSSYTVDLAALQSAITGNTVMLVGSMPNFPYG---TMDDIGAIAKLGEKYGI 303
               +T+DL  L +AIT  T  L  + PN P G   + DD+ AI     ++G+
Sbjct: 140 GGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGL 192

Length = 382

>gnl|CDD|163523 TIGR03811, tyr_de_CO2_Ent, tyrosine decarboxylase, Enterococcus type

 Score = 45.2 bits (107), Expect = 5e-05
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 56/235 (23%)

Query: 217 AREEKGIS-LPEIVLPTTAHPAFDKAANYFGM---KVKHIRLTSSYTVDLAALQSAITG- 271
           AR  K +  L + ++P T H ++ KAA+  G+   +V  + + S+Y +D+  L+  I   
Sbjct: 213 ARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKL 272

Query: 272 --------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY---GIP--VHVDCCLGGF-LAP 317
                     V +VGS      G +D I  I  L  K    GI   +HVD   GG+  A 
Sbjct: 273 AAEKTPILGVVGVVGSTEE---GAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAI 329

Query: 318 FMSAAGYPLPPFDF--------------------------SLPGVTSISVDTHKYGFTPK 351
           F+      +P  D                           ++    S+++D HK G+ P 
Sbjct: 330 FLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY 389

Query: 352 GSSVVLYRDLKYKHC-QYFVT------SDWPGGNYGSPSVSGSRSGGIIATCWAA 399
            +  ++ +D++ +    YF T      +D P    G+  + GS++G   A+ WAA
Sbjct: 390 SAGGIVIQDIRMRDVISYFATYVFEKGADIP-ALLGAYILEGSKAGATAASVWAA 443

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis [Cellular processes, Adaptations to atypical conditions]. Length = 608

>gnl|CDD|179511 PRK02948, PRK02948, cysteine desulfurase; Provisional

 Score = 45.1 bits (107), Expect = 5e-05
 Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 36/192 (18%)

Query: 178 AEVIKMCARMFN---GGPETCGCMTSGGTESIMMA----CKAYRDYAREEKGISLPEIVL 230
           + ++++C + F    GG E     TSGGTES  +A      A     +           +
Sbjct: 42  SSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKH----------I 91

Query: 231 PTTA--HPAFDKAANYF---GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPY 285
            TT   H +           G  V  I +  S  + L  L+ AIT +TV+      N   
Sbjct: 92  ITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEI 151

Query: 286 GTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK 345
           GT+  I  I  L +KY +  H DC          +    P+  F+    G+ S+SV  HK
Sbjct: 152 GTIQPIAEIGALLKKYNVLFHSDCV--------QTFGKLPIDVFEM---GIDSLSVSAHK 200

Query: 346 -YGFTPKGSSVV 356
            YG  PKG   V
Sbjct: 201 IYG--PKGVGAV 210

Length = 381

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 18/127 (14%)

Query: 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKV 249
           PE    +T+G  E++ +A  A  +          P  E+++P   +P+++ A    G K 
Sbjct: 88  PEEEIIVTAGAKEALFLAFLALLN----------PGDEVLIPDPGYPSYEAAVKLAGGKP 137

Query: 250 KHIRLTSS---YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGI 303
             + L      +  DL  L++AIT  T  ++ + PN P G +   +++ AI +L  ++ I
Sbjct: 138 VPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDI 197

Query: 304 PVHVDCC 310
            +  D  
Sbjct: 198 IIISDEI 204

Length = 393

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 17/118 (14%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
           +T+G  ++I +              ++ P   I+LP   +P ++  A + G++V+H  L 
Sbjct: 122 LTAGCAQAIEIIMSV----------LAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLL 171

Query: 256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYG---TMDDIGAIAKLGEKYGIPVHVD 308
               + VDL  +++    NTV +V   PN P G   + + +  IA+   K GI V  D
Sbjct: 172 PERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIAD 229

Length = 430

>gnl|CDD|216261 pfam01041, DegT_DnrJ_EryC1, DegT/DnrJ/EryC1/StrS aminotransferase family

 Score = 42.6 bits (101), Expect = 3e-04
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 257 SYTVDLAALQSAITGNT--VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCC 310
           +Y +D AA+++AIT  T  +M V  +    YG   D+ AI  +  ++G+PV  D  
Sbjct: 97  TYNIDPAAIEAAITPRTKAIMPV-HL----YGQPADMDAIRAIAAEHGLPVIEDAA 147

The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyzes the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin. Length = 362

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 17/118 (14%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRL- 254
           +TSG T++I +A             ++ P   I+LP    P ++  A +  ++V+++ L 
Sbjct: 101 ITSGCTQAIDVALSM----------LARPGANILLPRPGFPIYELCAAFRHLEVRYVDLL 150

Query: 255 -TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVD 308
               + VDL A+++    NTV LV   P  P G +     +  IA+  EK  I V  D
Sbjct: 151 PEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIAD 208

Length = 409

>gnl|CDD|163511 TIGR03799, NOD_PanD_pyr, putative pyridoxal-dependent aspartate 1-decarboxylase

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 25/126 (19%)

Query: 286 GTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT---SISVD 342
           G +D +  +A + ++ G   HVD   GG  A  +S     L      L G+    S+++D
Sbjct: 279 GNIDPLDEMADIAQELGCHFHVDAAWGG--ATLLSNTYRHL------LKGIERADSVTID 330

Query: 343 THKYGFTPKGSSVVLYRDLKY-----KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCW 397
            HK  + P G+ +VL++D         H +Y +       + GS ++ GSR G       
Sbjct: 331 AHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKG--SKDLGSHTLEGSRPG------- 381

Query: 398 AAMMYF 403
            AM+ +
Sbjct: 382 MAMLVY 387

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent) [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A]. Length = 522

>gnl|CDD|131034 TIGR01979, sufS, cysteine desulfurases, SufSfamily

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 25/166 (15%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL 254
           T G TESI +   ++ D +  + G    EIV+    H A    +   A   G  +K I L
Sbjct: 86  TRGTTESINLVAYSWGD-SNLKAG---DEIVISEMEHHANIVPWQLLAERTGATLKFIPL 141

Query: 255 TSSYTVDLAALQSAITGNT-VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
               T+DL  L+  +T  T ++ +  + N   GT++ +  IAKL  + G  V VD     
Sbjct: 142 DDDGTLDLDDLEKLLTEKTKLVAITHVSNV-LGTVNPVEEIAKLAHQVGAKVLVDGAQA- 199

Query: 314 FLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKGSSVVLY 358
              P M        P D             HK YG T  G   VLY
Sbjct: 200 --VPHM--------PVDVQALDCDFYVFSGHKMYGPTGIG---VLY 232

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 403

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score = 42.4 bits (99), Expect = 4e-04
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 228 IVLPTTAHPAFDKAANYFGMKVKHIRL--TSSYTVDLAALQSAITGNTVMLVGSMPNFPY 285
           I+LP    P +D  A Y G++V+   L     + +DL  +++    NTV +V   PN P 
Sbjct: 158 ILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPC 217

Query: 286 GTM---DDIGAIAKLGEKYGIPVHVD 308
           G +   D +  +A+   K GI V  D
Sbjct: 218 GNVYSHDHLKKVAETARKLGIMVISD 243

Length = 462

>gnl|CDD|132444 TIGR03403, nifS_epsilon, cysteine desulfurase, NifS family, epsilon proteobacteria type

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 21/160 (13%)

Query: 198 MTSGGTESIMMACKA-YRDYARE-EKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHI 252
           +TS  TES     K  Y D   +  K      I+     HPA      +    G++V ++
Sbjct: 65  ITSCATESNNWVLKGVYFDEILKGGKN----HIITTEVEHPAVRATCAFLESLGVEVTYL 120

Query: 253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG 312
            +    T+    ++ AIT  T ++     N   G +  I  I ++ ++ G+  H D    
Sbjct: 121 PINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA--- 177

Query: 313 GFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG 352
                 + A G    P D    GV  +S   HK+   PKG
Sbjct: 178 ------VQAIGK--IPVDVQKAGVDFLSFSAHKF-HGPKG 208

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation. Length = 382

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 41.4 bits (98), Expect = 7e-04
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297
           F+K    FG++V  +  +     DL AL++AI  NT  +    P  P   + DI AIAK+
Sbjct: 108 FEKVLPRFGIEVTFVDPS-----DLDALEAAIKPNTKAVFLETPTNPLLKVVDIEAIAKI 162

Query: 298 GEKYGIPVHVDCCLGGFLAP 317
            +K+G  V VD     F +P
Sbjct: 163 AKKHGALVVVDNT---FASP 179

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|181005 PRK07503, PRK07503, methionine gamma-lyase; Provisional

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP 304
           FG+ V+H+ LT     D AAL++AI+  T M+    P  P   + DI A+A++    G  
Sbjct: 128 FGVTVRHVDLT-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAK 182

Query: 305 VHVD 308
           V VD
Sbjct: 183 VVVD 186

Length = 403

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)

Query: 221 KGISLPE--IVLPTTAHPAFDKAANYFGMKVKHIRL--TSSYTVDLAALQSAITGNTVML 276
           K ++ PE  I+LP    P  +  A +  ++++H  L     + VDL A+++    NT+ +
Sbjct: 115 KVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174

Query: 277 VGSMPNFPYG---TMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333
           V   P  P G   + + +  IA+   K GI V  D   G  +  F S    P+  F   +
Sbjct: 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIV--FGSKPFVPMGLFASIV 232

Query: 334 PGVTSISV 341
           P +T  S+
Sbjct: 233 PVITLGSI 240

Length = 409

>gnl|CDD|223476 COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

 Score = 39.2 bits (92), Expect = 0.004
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 257 SYTVDLAALQSAITGNT--VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCC 310
           +  +D   +++AIT  T  ++ V        G   D+ AI  L +++G+PV  D  
Sbjct: 107 TLNIDPDLIEAAITPRTKAIIPVHL-----AGQPCDMDAIMALAKRHGLPVIEDAA 157

Length = 374

>gnl|CDD|99740 cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

 Score = 39.1 bits (92), Expect = 0.004
 Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 59/164 (35%)

Query: 178 AEVIKMCARMFNGGPET----------CGC----MTSGGTESIMMACKAYRDYAREEKGI 223
            EV+         GP+            G       S GT ++ +A +A         GI
Sbjct: 6   EEVLDS--GWLTLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRA--------LGI 55

Query: 224 SLP--EIVLPT-----TAHPAFDKAANYFGMKVKHIRLT--------SSYTVDLAALQSA 268
             P  E+++P+     TA+                +  T         +Y +D   +++A
Sbjct: 56  G-PGDEVIVPSFTFVATANAIL------------LLGATPVFVDIDPDTYNIDPELIEAA 102

Query: 269 ITGNT--VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCC 310
           IT  T  ++ V    +  YG   D+ AI  + +++G+PV  D  
Sbjct: 103 ITPRTKAIIPV----HL-YGNPADMDAIMAIAKRHGLPVIEDAA 141

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD. Length = 352

>gnl|CDD|180344 PRK05994, PRK05994, O-acetylhomoserine aminocarboxypropyltransferase; Validated

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 259 TVDLAALQSAITGNT-VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVD 308
             D A+ + AIT  T  + + S+ N P GT+ DI AIA++  + G+P+ VD
Sbjct: 135 ADDPASFERAITPRTKAIFIESIAN-PGGTVTDIAAIAEVAHRAGLPLIVD 184

Length = 427

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	435
KOG1383|consensus	491		100.0
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	100.0
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	100.0
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	100.0
PLN02590	539	probable tyrosine decarboxylase	100.0
PLN02263	470	serine decarboxylase	100.0
PLN03032	374	serine decarboxylase; Provisional	100.0
PLN02880	490	tyrosine decarboxylase	100.0
PRK02769	380	histidine decarboxylase; Provisional	100.0
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	100.0
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	100.0
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.98
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.97
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.97
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.97
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.96
PLN02651	364	cysteine desulfurase	99.96
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.95
KOG1549|consensus	428		99.95
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.95
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.95
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.95
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.95
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.95
KOG0628|consensus	511		99.95
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.94
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.94
KOG0257|consensus	420		99.94
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.94
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.94
KOG0629|consensus	510		99.94
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.94
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.94
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.94
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.94
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.94
PRK14012	404	cysteine desulfurase; Provisional	99.93
PRK02948	381	cysteine desulfurase; Provisional	99.93
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.93
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.93
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.93
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.93
PLN02409	401	serine--glyoxylate aminotransaminase	99.92
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.91
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.91
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.91
PRK08361	391	aspartate aminotransferase; Provisional	99.91
PRK05367	954	glycine dehydrogenase; Provisional	99.91
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.9
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.9
PLN00175	413	aminotransferase family protein; Provisional	99.9
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.9
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.9
PRK06207	405	aspartate aminotransferase; Provisional	99.9
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.9
PRK05942	394	aspartate aminotransferase; Provisional	99.9
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.9
PLN02368	407	alanine transaminase	99.9
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.89
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.89
PRK05764	393	aspartate aminotransferase; Provisional	99.89
PLN02231	534	alanine transaminase	99.89
PRK08912	387	hypothetical protein; Provisional	99.89
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.89
PLN02187	462	rooty/superroot1	99.89
PRK06108	382	aspartate aminotransferase; Provisional	99.89
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.89
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.89
PRK07681	399	aspartate aminotransferase; Provisional	99.89
PRK06348	384	aspartate aminotransferase; Provisional	99.89
PRK05957	389	aspartate aminotransferase; Provisional	99.89
PLN02656	409	tyrosine transaminase	99.89
PRK08068	389	transaminase; Reviewed	99.89
PTZ00433	412	tyrosine aminotransferase; Provisional	99.88
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.88
PRK06290	410	aspartate aminotransferase; Provisional	99.88
PRK08960	387	hypothetical protein; Provisional	99.88
PRK07337	388	aminotransferase; Validated	99.88
PTZ00377	481	alanine aminotransferase; Provisional	99.88
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.88
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.88
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.88
PRK12414	384	putative aminotransferase; Provisional	99.88
PRK07777	387	aminotransferase; Validated	99.88
PRK07324	373	transaminase; Validated	99.88
PRK08636	403	aspartate aminotransferase; Provisional	99.88
PRK09082	386	methionine aminotransferase; Validated	99.88
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.88
PRK07682	378	hypothetical protein; Validated	99.87
PRK08363	398	alanine aminotransferase; Validated	99.87
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.87
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.87
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.87
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.87
PRK07550	386	hypothetical protein; Provisional	99.87
PRK06107	402	aspartate aminotransferase; Provisional	99.87
PRK07683	387	aminotransferase A; Validated	99.87
PRK09148	405	aminotransferase; Validated	99.87
PRK06855	433	aminotransferase; Validated	99.87
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.87
KOG0259|consensus	447		99.86
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.86
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.86
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.86
PRK12566	954	glycine dehydrogenase; Provisional	99.86
PRK09265	404	aminotransferase AlaT; Validated	99.86
PRK06225	380	aspartate aminotransferase; Provisional	99.86
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.86
PRK06836	394	aspartate aminotransferase; Provisional	99.86
PLN02724	805	Molybdenum cofactor sulfurase	99.86
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.86
PRK08175	395	aminotransferase; Validated	99.85
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.85
PRK07568	397	aspartate aminotransferase; Provisional	99.85
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.85
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.85
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.85
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.84
PRK07179	407	hypothetical protein; Provisional	99.84
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.84
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.84
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.84
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.84
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.84
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.83
PRK05839	374	hypothetical protein; Provisional	99.83
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.83
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.83
PRK05367	954	glycine dehydrogenase; Provisional	99.83
PRK09105	370	putative aminotransferase; Provisional	99.83
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.83
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.82
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.82
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.82
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.82
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.82
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.82
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.82
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.82
PRK09275	527	aspartate aminotransferase; Provisional	99.81
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.81
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.81
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.81
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.81
PRK08637	388	hypothetical protein; Provisional	99.81
PRK08776	405	cystathionine gamma-synthase; Provisional	99.81
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.81
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.81
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.81
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.81
PRK08861	388	cystathionine gamma-synthase; Provisional	99.81
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.81
PTZ00376	404	aspartate aminotransferase; Provisional	99.81
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.8
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.8
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.8
PRK03321	352	putative aminotransferase; Provisional	99.8
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.8
PRK03080	378	phosphoserine aminotransferase; Provisional	99.8
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.79
PRK08045	386	cystathionine gamma-synthase; Provisional	99.79
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.79
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.79
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.79
PLN02721	353	threonine aldolase	99.79
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.79
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.79
PRK08064	390	cystathionine beta-lyase; Provisional	99.79
PRK07811	388	cystathionine gamma-synthase; Provisional	99.79
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.79
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.79
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.79
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.79
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.79
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.79
PLN02822	481	serine palmitoyltransferase	99.78
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.78
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.78
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.78
PRK09028	394	cystathionine beta-lyase; Provisional	99.78
PRK07050	394	cystathionine beta-lyase; Provisional	99.78
KOG2862|consensus	385		99.78
PLN02242	418	methionine gamma-lyase	99.78
PRK08574	385	cystathionine gamma-synthase; Provisional	99.78
PLN02672	1082	methionine S-methyltransferase	99.78
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.78
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.78
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.78
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.78
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.78
PRK07908	349	hypothetical protein; Provisional	99.78
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.77
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.77
PRK06767	386	methionine gamma-lyase; Provisional	99.77
PRK08249	398	cystathionine gamma-synthase; Provisional	99.77
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.77
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.77
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.77
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.77
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.77
KOG0256|consensus	471		99.77
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.76
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.76
PLN02509	464	cystathionine beta-lyase	99.76
PRK07503	403	methionine gamma-lyase; Provisional	99.76
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.76
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.76
PRK07671	377	cystathionine beta-lyase; Provisional	99.76
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.76
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.76
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.75
PRK13392	410	5-aminolevulinate synthase; Provisional	99.75
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.75
PRK05968	389	hypothetical protein; Provisional	99.75
PRK06234	400	methionine gamma-lyase; Provisional	99.75
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.75
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.75
PRK06460	376	hypothetical protein; Provisional	99.75
PRK08354	311	putative aminotransferase; Provisional	99.75
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.75
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.75
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.75
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.75
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.75
PRK02627	396	acetylornithine aminotransferase; Provisional	99.74
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.74
PLN02397	423	aspartate transaminase	99.74
PRK09064	407	5-aminolevulinate synthase; Validated	99.74
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.74
PLN02271	586	serine hydroxymethyltransferase	99.74
PRK07582	366	cystathionine gamma-lyase; Validated	99.74
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.74
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.73
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.73
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.73
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.73
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.73
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.73
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.73
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.73
PLN02483	489	serine palmitoyltransferase	99.73
PRK05939	397	hypothetical protein; Provisional	99.73
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.72
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.72
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.72
PRK08114	395	cystathionine beta-lyase; Provisional	99.72
PRK13393	406	5-aminolevulinate synthase; Provisional	99.72
PRK15029	755	arginine decarboxylase; Provisional	99.72
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.72
PRK05967	395	cystathionine beta-lyase; Provisional	99.72
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.71
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.71
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.71
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.71
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.71
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.7
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.7
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.7
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.7
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.69
PRK07049	427	methionine gamma-lyase; Validated	99.69
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.69
KOG0634|consensus	472		99.69
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.69
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.69
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.68
PRK07505	402	hypothetical protein; Provisional	99.68
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.68
PLN02624	474	ornithine-delta-aminotransferase	99.67
PRK13578	720	ornithine decarboxylase; Provisional	99.67
PRK05965	459	hypothetical protein; Provisional	99.67
PRK04311	464	selenocysteine synthase; Provisional	99.67
PRK07482	461	hypothetical protein; Provisional	99.67
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.67
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.67
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.66
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.66
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.66
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.66
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.65
PLN00144	382	acetylornithine transaminase	99.65
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.65
PRK12403	460	putative aminotransferase; Provisional	99.64
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.64
PRK06541	460	hypothetical protein; Provisional	99.64
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.64
PRK10534	333	L-threonine aldolase; Provisional	99.64
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.64
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.63
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.63
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.63
PLN02955	476	8-amino-7-oxononanoate synthase	99.63
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.63
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.63
PRK07481	449	hypothetical protein; Provisional	99.62
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.62
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.62
PRK06062	451	hypothetical protein; Provisional	99.62
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.62
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.61
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.61
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.61
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.61
PRK06917	447	hypothetical protein; Provisional	99.61
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.61
PRK07678	451	aminotransferase; Validated	99.61
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.6
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.6
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.6
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.6
PRK07483	443	hypothetical protein; Provisional	99.6
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.6
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.6
PRK12566	954	glycine dehydrogenase; Provisional	99.6
PRK06434	384	cystathionine gamma-lyase; Validated	99.6
PRK07480	456	putative aminotransferase; Validated	99.59
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.59
KOG1402|consensus	427		99.59
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.59
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.59
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.59
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.59
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.59
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.59
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.58
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.58
PRK07036	466	hypothetical protein; Provisional	99.58
KOG0258|consensus	475		99.58
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.58
PRK15400	714	lysine decarboxylase CadA; Provisional	99.58
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.58
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.58
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.58
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.58
PRK06105	460	aminotransferase; Provisional	99.57
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.57
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.56
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.56
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.56
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.56
KOG1401|consensus	433		99.55
PRK04260	375	acetylornithine aminotransferase; Provisional	99.55
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.55
PRK13237	460	tyrosine phenol-lyase; Provisional	99.55
KOG0053|consensus	409		99.54
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.54
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.53
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.53
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.52
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.51
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.5
KOG1368|consensus	384		99.49
PLN02452	365	phosphoserine transaminase	99.49
PRK08297	443	L-lysine aminotransferase; Provisional	99.48
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.48
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.47
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.46
PRK06149	972	hypothetical protein; Provisional	99.46
PRK06148	1013	hypothetical protein; Provisional	99.45
KOG1404|consensus	442		99.44
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.44
PRK07046	453	aminotransferase; Validated	99.43
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.43
PRK12462	364	phosphoserine aminotransferase; Provisional	99.42
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.4
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.4
KOG2040|consensus	1001		99.35
KOG1360|consensus	570		99.35
KOG1359|consensus	417		99.34
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.28
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.24
KOG0633|consensus	375		99.23
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.19
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.17
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	99.14
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.14
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	99.01
KOG1357|consensus	519		98.98
KOG2467|consensus	477		98.95
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	98.95
COG4100	416	Cystathionine beta-lyase family protein involved i	98.83
KOG2040|consensus	1001		98.79
KOG1358|consensus	467		98.74
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.68
KOG1403|consensus	452		98.64
KOG3846|consensus	465		98.21
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.14
KOG1411|consensus	427		97.99
KOG3843|consensus	432		97.94
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	97.92
KOG1412|consensus	410		97.74
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	97.7
KOG1405|consensus	484		97.4
KOG0630|consensus	838		96.52
KOG2790|consensus	370		96.31
PLN02672	1082	methionine S-methyltransferase	89.65
TIGR03573	343	WbuX N-acetyl sugar amidotransferase. This enzyme	87.35
KOG1465|consensus	353		80.4

>KOG1383|consensus

Probab=100.00  E-value=1.3e-57  Score=434.35  Aligned_cols=370  Identities=41%  Similarity=0.707  Sum_probs=348.5

Q ss_pred             chhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q psy10210         54 TDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWK  133 (435)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~  133 (435)
                      ..++.+|+.+++|+.++++|.++..+++++++..+++...+........+...+|+++++-+++++.+.++.+.+.+ |.
T Consensus         3 ~~~l~~r~~~~~f~~l~~~p~v~~~i~~~~~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~-~~   81 (491)
T KOG1383|consen    3 EEGLKKRLSGKVFKLLKKLPFVRVLIEKELNKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGN-PR   81 (491)
T ss_pred             chhHHHHhHHHHHHHHhhChHHHHHHHHHHhhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCC-cc
Confidence            36788999999999999999999999999999999999888877777777889999999999999999999987766 88


Q ss_pred             CCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH
Q psy10210        134 HGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY  213 (435)
Q Consensus       134 ~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~  213 (435)
                      .+..++.+|.+.++..+.+.+.++++   |++++|.+|..++++.++++|+++||+.+++.++..|+|||||+.++++.+
T Consensus        82 ~~~vS~~v~~~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~  158 (491)
T KOG1383|consen   82 LGLASGVVYWGEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSY  158 (491)
T ss_pred             cCeeeEEEecCCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHH
Confidence            89999999999999999999999997   899999999999999999999999999998889999999999999999999


Q ss_pred             HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHH
Q psy10210        214 RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIG  292 (435)
Q Consensus       214 ~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~  292 (435)
                      ++.....+|+.+|+++++...|.++.+++++++++++.||++ .++++|+..+.+.+++||++++.+.|++|+|.+|+++
T Consensus       159 ~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve  238 (491)
T KOG1383|consen  159 RNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVE  238 (491)
T ss_pred             HHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHH
Confidence            988877799999999999999999999999999999999999 7899999999999999999999999999999999999


Q ss_pred             HHHHHHHH-cCCcEEEeccccchhhhcccccCCC-CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210        293 AIAKLGEK-YGIPVHVDCCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV  370 (435)
Q Consensus       293 ~i~~la~~-~~~~livD~~~~~~~~~~~~~~g~~-~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~  370 (435)
                      +|.+++.+ +++++|+|+|.|+|+.|    +++. ..+|||+.+|+.++++++||||++|+|+|++++++++++..++.+
T Consensus       239 ~l~~l~~e~w~ipiHvDa~~GgFi~p----~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~  314 (491)
T KOG1383|consen  239 KLADLLLEIWDIPIHVDACLGGFINP----AGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFF  314 (491)
T ss_pred             HHHHHHHHHhCCceeecccCcccccc----ccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEE
Confidence            99999999 99999999999999997    2322 338999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      ..+|.||.|+++|++|||+++.++++|++|..+|.+||.+..+++.+.++.+.++++++..
T Consensus       315 ~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~  375 (491)
T KOG1383|consen  315 HTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKG  375 (491)
T ss_pred             eccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            9999999999999999999999999999999999999999999999998888877766543

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-44  Score=356.98  Aligned_cols=323  Identities=31%  Similarity=0.486  Sum_probs=273.3

Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       102 ~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ......|+.+.+.++++.++......+...+ ++ ...+....+.+.......+.+..+...|..+++.+|+..++|.++
T Consensus        28 ~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~-~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~  106 (460)
T COG0076          28 SDSRMAPEKGEPLEEVLDELAELLIKDELYL-DGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERV  106 (460)
T ss_pred             hhhccCCccCCchhhHHHHHHHHhhcccccc-cCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHH
Confidence            3345778999999999999998855443332 32 222222234444455555555555566899999999999999999


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc---C---CCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK---G---ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~---g---~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      +.|+++++|++....+.+|+|||||+.+++.+.++......   +   ...|+|+++..+|+++.|+++++|++++.+|+
T Consensus       107 v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~  186 (460)
T COG0076         107 VNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPT  186 (460)
T ss_pred             HHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEe
Confidence            99999999998777899999999999999999998875311   1   23689999999999999999999999999999


Q ss_pred             CC-CccccHHHHHHHhhcCceE--EEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        255 TS-SYTVDLAALQSAITGNTVM--LVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       255 ~~-~~~~d~~~l~~~i~~~~~~--v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      ++ ++++|+++++++|++++..  |+.+.+++++|.+||+++|+++|++|++|+|||+|+|||+++|.+..+    .|++
T Consensus       187 ~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~----~~~f  262 (460)
T COG0076         187 VPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG----RWDF  262 (460)
T ss_pred             ccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccc----hhhc
Confidence            86 7999999999999999888  999999999999999999999999999999999999999999998776    4889


Q ss_pred             CCCCccEEEecCCCCCCccCCcEEEEEeCC-ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210        332 SLPGVTSISVDTHKYGFTPKGSSVVLYRDL-KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW  410 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g~g~il~~~~-~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~  410 (435)
                      ..++|||+++|+||||++|.|+|+++++|+ .+.+...+..+.+.++...+.++.+||++..++++|+.++.+|.+||.+
T Consensus       263 ~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~  342 (460)
T COG0076         263 GLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRK  342 (460)
T ss_pred             CCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHH
Confidence            999999999999999999999999999999 4666555555556665667788999999988899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCc
Q psy10210        411 ICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       411 ~~~~~~~~~~~~~~~l~~l  429 (435)
                      .+++..+.++++.+++..+
T Consensus       343 l~~~~~~~a~~la~~l~~~  361 (460)
T COG0076         343 LLDRTLELARYLAEELEKL  361 (460)
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            9998888888887776654

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=8.6e-41  Score=329.69  Aligned_cols=317  Identities=29%  Similarity=0.384  Sum_probs=256.9

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +...+|+.+.+.+++++++.+.+......|.++.+.+..+. .+.....+.+.+....+.|.++++.+|...++|.++.+
T Consensus         8 ~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~-~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~   86 (373)
T PF00282_consen    8 LDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPG-GPSPASILADLLASALNQNGFTWEASPAATEIEREVIR   86 (373)
T ss_dssp             CHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHH
T ss_pred             CccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccC-CccHHHHHHHHHHhhhcccccccccccccccchHHHHH
Confidence            45577898899999999999999988888987877766654 46677788888888778889999999999999999999


Q ss_pred             HHHHHhCCCC------CCceEEcCChHHHHHHHHHHHHHHhhh---hcC---CCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210        183 MCARMFNGGP------ETCGCMTSGGTESIMMACKAYRDYARE---EKG---ISLPEIVLPTTAHPAFDKAANYFGMKVK  250 (435)
Q Consensus       183 ~la~l~g~~~------~~~~~~t~ggteai~~a~~a~~~~~~~---~~g---~~~~~viv~~~~~~~~~~~~~~~g~~v~  250 (435)
                      |+++++|.+.      ...+++|+|||+|+..++.++|+....   .+|   ..++.|++++.+|+++.+++..+|+.++
T Consensus        87 ~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~  166 (373)
T PF00282_consen   87 WLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVR  166 (373)
T ss_dssp             HHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEE
T ss_pred             HHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEE
Confidence            9999999982      247999999999999999999876543   245   4578899999999999999999999999


Q ss_pred             EEecCCCccccHHHHHHHhhc---C---ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh--hccccc
Q psy10210        251 HIRLTSSYTVDLAALQSAITG---N---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA--PFMSAA  322 (435)
Q Consensus       251 ~vp~~~~~~~d~~~l~~~i~~---~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~--~~~~~~  322 (435)
                      .||+++++++|+++|++++.+   +   +.+|+.+.+++.+|.+||+++|.++|++|++|+|||+||||..+  ++.+  
T Consensus       167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~--  244 (373)
T PF00282_consen  167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYR--  244 (373)
T ss_dssp             EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTG--
T ss_pred             EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccccc--
Confidence            999999999999999999864   2   55899999999999999999999999999999999999999443  3221  


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCCchHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRSGGII  393 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~~~~i  393 (435)
                           .+.+....+||+++|+|||++.|.++|+++++++..+...+...++|.+         +.+...++.+|| +...
T Consensus       245 -----~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~a  318 (373)
T PF00282_consen  245 -----HLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRA  318 (373)
T ss_dssp             -----GGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHH
T ss_pred             -----ccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc-cchH
Confidence                 2455566789999999999999999999999999876655545666665         235668899999 4445


Q ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        394 ATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       394 a~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +.+|++|+.+|.+||.+++++..+.++++.+.+.+
T Consensus       319 lk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~  353 (373)
T PF00282_consen  319 LKLWATLKSLGREGYRERIRRCIELARYLADRLRK  353 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            69999999999999999999999988877766544

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=100.00  E-value=1.4e-39  Score=325.64  Aligned_cols=314  Identities=23%  Similarity=0.389  Sum_probs=255.2

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccc-cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210        105 LELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAV-YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM  183 (435)
Q Consensus       105 ~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  183 (435)
                      ..+|+.+.+++++++.+...+..+...  ++.+.+.. ....|++.+++...+..    |..+|..+|...++|+++++|
T Consensus        15 ~~~p~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~~~l~~----~~~np~s~~~~~~le~~~~~~   88 (431)
T TIGR01788        15 YRMPEEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMDETINK----NMIDKDEYPQTAEIENRCVNM   88 (431)
T ss_pred             ccCCCCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHHHHHhc----CCCCcccCccHHHHHHHHHHH
Confidence            478999999999999999776543222  23333333 33478888888887764    344556678888999999999


Q ss_pred             HHHHhCCC-C--CCceEEcCChHHHHHHHHHHHHHHhhh---hcC--CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        184 CARMFNGG-P--ETCGCMTSGGTESIMMACKAYRDYARE---EKG--ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       184 la~l~g~~-~--~~~~~~t~ggteai~~a~~a~~~~~~~---~~g--~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      +++++|++ +  +..+.+|+|||||+++++.+++.....   ..|  ..++.|++++.+|+++.++++.+|++++.||++
T Consensus        89 la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d  168 (431)
T TIGR01788        89 LADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMD  168 (431)
T ss_pred             HHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecC
Confidence            99999998 2  223456899999999999988754211   112  335689999999999999999999999999998


Q ss_pred             CC-ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc------CCcEEEeccccchhhhcccccCCCCCC
Q psy10210        256 SS-YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY------GIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       256 ~~-~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~------~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      ++ +.+|+++|+++++++|.+|+++++||.+|.++|+++|+++|+++      |+++|+|+||+++..+|.-    +..+
T Consensus       169 ~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~----~~~~  244 (431)
T TIGR01788       169 PGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVY----PDLE  244 (431)
T ss_pred             CCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhC----CCch
Confidence            65 68999999999999999999999999999999999999999999      9999999999999987642    2336


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      +++...++|++++|+|||+++|+|+|++++++++.....+...++|.++...+.++.+||++..+++.|+.++.+|.+||
T Consensus       245 ~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~  324 (431)
T TIGR01788       245 WDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGY  324 (431)
T ss_pred             hhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHH
Confidence            77778899999999999988999999999998764433344466788876666789999998666689999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCC
Q psy10210        409 VWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .+.+++..+.++++.+.|.+
T Consensus       325 ~~i~~~~~~la~~l~~~L~~  344 (431)
T TIGR01788       325 RKIMQNSLDVARYLAEEIAK  344 (431)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999988887777665543

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PLN02590 probable tyrosine decarboxylase

Probab=100.00  E-value=1.2e-38  Score=324.58  Aligned_cols=318  Identities=17%  Similarity=0.194  Sum_probs=260.2

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +...+|+.+.+.+++++++.+.+.....+|.++.+.+..+ +.+.....+.+++....+.+...++.+|...++|.++.+
T Consensus        99 l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~-~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~  177 (539)
T PLN02590         99 LPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYA-SSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLD  177 (539)
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEecc-CCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHH
Confidence            3457789999999999999999998888998887777654 455556677777777667778899999999999999999


Q ss_pred             HHHHHhCCCCC------CceEEcCChHHHHHHHHHHHHHHhhhhcC---CCCCeEEEeCCCchhHHHHHHHcCC---EEE
Q psy10210        183 MCARMFNGGPE------TCGCMTSGGTESIMMACKAYRDYAREEKG---ISLPEIVLPTTAHPAFDKAANYFGM---KVK  250 (435)
Q Consensus       183 ~la~l~g~~~~------~~~~~t~ggteai~~a~~a~~~~~~~~~g---~~~~~viv~~~~~~~~~~~~~~~g~---~v~  250 (435)
                      |+++++|.++.      ..+++|+|||+|+..++.++|+...++.|   .++..|++++.+|+++.++++.+|+   +++
T Consensus       178 wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr  257 (539)
T PLN02590        178 WLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIR  257 (539)
T ss_pred             HHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEE
Confidence            99999999864      46999999999999999999886544333   3455778899999999999999998   589


Q ss_pred             EEecC--CCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        251 HIRLT--SSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       251 ~vp~~--~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      .||+|  .++++|+++|+++|.+      .+.+|+.+.+++.+|.+||+++|+++|++||+|+|||+||||+++.+.+..
T Consensus       258 ~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r  337 (539)
T PLN02590        258 LLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYR  337 (539)
T ss_pred             EEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhH
Confidence            99998  4689999999999964      368999999999999999999999999999999999999999987554322


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCCchHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRSGGII  393 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~~~~i  393 (435)
                           .+......+||+++|+|||++.|.+||+++++++......+...++|..         ..+...++.+||++.+ 
T Consensus       338 -----~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~ra-  411 (539)
T PLN02590        338 -----KFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRS-  411 (539)
T ss_pred             -----HHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHH-
Confidence                 2223345679999999999999999999999997543222222222221         1245567889999876 


Q ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        394 ATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       394 a~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +..|++|+.+|.+||.+++++..+.++++.+.+.
T Consensus       412 LklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~  445 (539)
T PLN02590        412 LKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVA  445 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5999999999999999999999998887766553

>PLN02263 serine decarboxylase

Probab=100.00  E-value=4.6e-38  Score=312.63  Aligned_cols=294  Identities=21%  Similarity=0.229  Sum_probs=234.6

Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcCh----hHHHHHHHHHHHHHHHhC
Q psy10210        114 RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFP----GVCKMEAEVIKMCARMFN  189 (435)
Q Consensus       114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~~~la~l~g  189 (435)
                      .+++++.+.+.+.....+    .++| ++....+ -..+.+.+. +...|...|-.++    ..+++|.++.+|+++++|
T Consensus        75 ~~~~l~~~~~~~~~~~~~----~~gY-p~n~~~d-~s~l~~~l~-~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g  147 (470)
T PLN02263         75 MASVLARYRKTLVERTKH----HLGY-PYNLDFD-YGALGQLQH-FSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE  147 (470)
T ss_pred             HHHHHHHHHHHHHhcccc----eeCC-CCcccCC-hhhHHHHHH-hhccCCCCccccCCcchhHHHHHHHHHHHHHHHhC
Confidence            477888888887765433    3344 3332111 122333332 2334455555554    699999999999999999


Q ss_pred             CCC-CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHH
Q psy10210        190 GGP-ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSA  268 (435)
Q Consensus       190 ~~~-~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~  268 (435)
                      .++ +..+++|+|||||+.+++.++|+...      ++.+++++.+|+++.|+++++|++++.||+++++++|+++|+++
T Consensus       148 ~p~~~~~G~vtsGGTEaNL~Al~aARe~~~------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~a  221 (470)
T PLN02263        148 IEKNEYWGYITNCGTEGNLHGILVGREVFP------DGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAK  221 (470)
T ss_pred             CCCCCCeEEEeCcHHHHHHHHHHHHHhhcC------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHH
Confidence            976 34799999999999999999998532      24689999999999999999999999999999999999999999


Q ss_pred             hhcC---ceEEEEeCCCCCcccccCHHHHHHHHHHcCC-----cEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        269 ITGN---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI-----PVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       269 i~~~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~~-----~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      |.++   +.+|+.+.+++++|.+||+++|+++|++||+     |+|||+||||+++||.+..    +++++..+ +||++
T Consensus       222 I~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~----~~~df~~~-vDSIs  296 (470)
T PLN02263        222 LLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA----PKVTFKKP-IGSVS  296 (470)
T ss_pred             HHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc----cccCCCcC-ccEEE
Confidence            9754   5788899999999999999999999999997     9999999999999987652    46888765 99999


Q ss_pred             ecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy10210        341 VDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYK  420 (435)
Q Consensus       341 ~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~  420 (435)
                      +|+|||++.|.++|+++++++.+.  .+...++|...  ...++.|||++...+.+|++|+.+|.+||.++++++.+.++
T Consensus       297 vD~HK~l~~P~~cgvll~R~~~~~--~~~~~~~Yl~~--~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~  372 (470)
T PLN02263        297 VSGHKFVGCPMPCGVQITRMEHIN--VLSSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAH  372 (470)
T ss_pred             ECCccccCCCcCEEEEEEehhhHh--hhccChHhhCC--CCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            999999999999999999975431  11223344333  23578999999877899999999999999999999999988


Q ss_pred             HHHHhcCCc
Q psy10210        421 SCLQNLSDL  429 (435)
Q Consensus       421 ~~~~~l~~l  429 (435)
                      ++.+.+.+.
T Consensus       373 ~l~~~l~~~  381 (470)
T PLN02263        373 YLKDRLREA  381 (470)
T ss_pred             HHHHHHHhC
Confidence            887776543

>PLN03032 serine decarboxylase; Provisional

Probab=100.00  E-value=6.5e-37  Score=300.42  Aligned_cols=253  Identities=21%  Similarity=0.262  Sum_probs=211.4

Q ss_pred             CCCCCCCc-ChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH
Q psy10210        162 TNPLHPDI-FPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD  239 (435)
Q Consensus       162 ~~~~~~~~-~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~  239 (435)
                      +||..... ....+++|+++++++++++|+++++ .+++|+|||||+.+++.++++...      ++.|+++..+|+++.
T Consensus        52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~------~~~vi~s~~~H~Sv~  125 (374)
T PLN03032         52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFP------DGILYASRESHYSVF  125 (374)
T ss_pred             CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCC------CcEEEeCCCceeHHH
Confidence            44544322 2468999999999999999998764 479999999999999998875421      236999999999999


Q ss_pred             HHHHHcCCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcC-----CcEEEeccc
Q psy10210        240 KAANYFGMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG-----IPVHVDCCL  311 (435)
Q Consensus       240 ~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~-----~~livD~~~  311 (435)
                      ++++.+|++++.||++++|.+|+++|+++|++   +|.+|+++.++|++|.+||+++|+++|++||     +|+|+|+|+
T Consensus       126 kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~  205 (374)
T PLN03032        126 KAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGAL  205 (374)
T ss_pred             HHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccc
Confidence            99999999999999999999999999999987   4789999999999999999999999999996     589999999


Q ss_pred             cchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCch
Q psy10210        312 GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGG  391 (435)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~  391 (435)
                      +++..+|...    .+++++.. ++|++++|+||++++|+|+|+++++++.+. . .....+|...  ...++.|||++.
T Consensus       206 gg~~~p~~~~----~~~~~~~~-~vDSis~s~HK~~g~P~g~G~ll~r~~~~~-~-~~~~~~Yl~~--~d~ti~gSR~g~  276 (374)
T PLN03032        206 FGLMMPFVSR----APEVTFRK-PIGSVSVSGHKFLGCPMPCGVALTRKKHVK-A-LSQNVEYLNS--RDATIMGSRNGH  276 (374)
T ss_pred             hhhhhhccCC----CcccCCCc-CCcEEEECcccccCCCcCeEEEEEEchhhH-h-hccCCcccCC--CCCcccCCCchH
Confidence            9999887643    23567764 799999999999877999999999975442 1 1123333332  236789999998


Q ss_pred             HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        392 IIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       392 ~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      ..+++|++|+.+|.+||.+.++++.+.++++.+.|.+.
T Consensus       277 ~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~  314 (374)
T PLN03032        277 APLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA  314 (374)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            88899999999999999999999999988887776543

>PLN02880 tyrosine decarboxylase

Probab=100.00  E-value=3.3e-36  Score=306.70  Aligned_cols=322  Identities=16%  Similarity=0.182  Sum_probs=251.9

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +...+|+.+.+.+++++++.+.+.....+|.++.+.+..+. .+.....+++++....+.+...++.+|...++|.++.+
T Consensus        51 ~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~-~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~  129 (490)
T PLN02880         51 LPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPS-NSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLD  129 (490)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccC-CCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHH
Confidence            34467888899999999999988888888988877776544 34445677777776656667778889999999999999


Q ss_pred             HHHHHhCCCCC------CceEEcCChHHHHHHHHHHHHHHhhhhcC---CCCCeEEEeCCCchhHHHHHHHcCCE---EE
Q psy10210        183 MCARMFNGGPE------TCGCMTSGGTESIMMACKAYRDYAREEKG---ISLPEIVLPTTAHPAFDKAANYFGMK---VK  250 (435)
Q Consensus       183 ~la~l~g~~~~------~~~~~t~ggteai~~a~~a~~~~~~~~~g---~~~~~viv~~~~~~~~~~~~~~~g~~---v~  250 (435)
                      |+++++|.+..      ..+++|+|||+|+.+++.++|+......|   .++..|++++.+|+++.+++..+|+.   ++
T Consensus       130 wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~  209 (490)
T PLN02880        130 WLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCR  209 (490)
T ss_pred             HHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEE
Confidence            99999999864      35899999999999999999986543333   34557888999999999999999994   88


Q ss_pred             EEecCC--CccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        251 HIRLTS--SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       251 ~vp~~~--~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      .||+|.  ++++|+++|+++|.+      .+.+|+.+.+++.+|.+||+++|+++|++||+|+|||+|||++++...   
T Consensus       210 ~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~---  286 (490)
T PLN02880        210 LLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICP---  286 (490)
T ss_pred             EeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCH---
Confidence            999974  679999999999964      368999999999999999999999999999999999999999876432   


Q ss_pred             CCCCCCCCCC---CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCCc
Q psy10210        323 GYPLPPFDFS---LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRSG  390 (435)
Q Consensus       323 g~~~~~~d~~---~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~~  390 (435)
                           .++..   ..++||+++|+|||++.|.++|+++++++......+...++|..         ..+...++..+|+.
T Consensus       287 -----~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~  361 (490)
T PLN02880        287 -----EYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRF  361 (490)
T ss_pred             -----HHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcc
Confidence                 11211   23579999999999999999999999986543222212222211         11333557678888


Q ss_pred             hHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH---hcCCcccccC
Q psy10210        391 GIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ---NLSDLWLYLP  434 (435)
Q Consensus       391 ~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l~~~~p  434 (435)
                      .++ ..|++++.+|.++|.+++++..+.++++.+   +.++++...|
T Consensus       362 ~al-klw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~  407 (490)
T PLN02880        362 RSL-KLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP  407 (490)
T ss_pred             cHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence            775 999999999999999999966666555544   4455554433

>PRK02769 histidine decarboxylase; Provisional

Probab=100.00  E-value=5.7e-36  Score=295.89  Aligned_cols=242  Identities=24%  Similarity=0.377  Sum_probs=208.5

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK  250 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~  250 (435)
                      ..+++|+++++++++++|+++++ .+++|+|||||+..++.+.++...      +++|++++.+|+++.++++.+|++.+
T Consensus        62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~------~~~ii~s~~~H~Sv~ka~~~lg~~~~  135 (380)
T PRK02769         62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFP------DGTLYYSKDTHYSVSKIARLLRIKSR  135 (380)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCC------CcEEEeCCCceehHHHHHHHcCCCCc
Confidence            47899999999999999997553 579999999999999988775321      35799999999999999999999999


Q ss_pred             EEecCCCccccHHHHHHHhhcC---ceEEEEeCCCCCcccccCHHHHHHHHHHcC---CcEEEeccccchhhhcccccCC
Q psy10210        251 HIRLTSSYTVDLAALQSAITGN---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYG---IPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       251 ~vp~~~~~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~---~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .||++++|.+|+++|+++++++   |.+|++++++|++|.++|+++|+++|++||   +++|+|+||+++..+|.+..  
T Consensus       136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~--  213 (380)
T PRK02769        136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP--  213 (380)
T ss_pred             eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCcc--
Confidence            9999888999999999999886   999999999999999999999999999998   69999999999999887542  


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                        +++|+.. ++|++++|+|||+++|.|+|+++++++.+...  ....+|...  ...++.|||++..++++|++|+.+|
T Consensus       214 --~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~--~~~~~yl~~--~d~t~~GSR~g~~~l~lw~aL~~lg  286 (380)
T PRK02769        214 --PPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERI--SVDVDYIGS--RDQTISGSRNGHTALLLWAAIRSLG  286 (380)
T ss_pred             --ccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhc--ccCccccCC--CCCCccCCCCcHHHHHHHHHHHHHC
Confidence              3688877 99999999999988899999999997654321  112334332  2357899999988889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        405 FEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       405 ~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .+||.+.++++.+.++++.++|..
T Consensus       287 ~~G~~~~~~~~~~la~~l~~~L~~  310 (380)
T PRK02769        287 SKGLRQRVQHCLDMAQYAVDRLQA  310 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998888877754

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=100.00  E-value=2.3e-35  Score=301.00  Aligned_cols=321  Identities=19%  Similarity=0.257  Sum_probs=254.0

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM  183 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  183 (435)
                      ...+|+.+.+.+++++.+.+.+.....+|.++.+.+....+.|.+...+.+ +....+.|.+.++.+|...++|.++.+|
T Consensus        59 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~w  137 (522)
T TIGR03799        59 SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGM  137 (522)
T ss_pred             ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHH
Confidence            346899999999999999888888889999888888887775655444554 3334456788899999999999999999


Q ss_pred             HHHHhCCC------------CCCceEEcCChHHHHHHHHHHHHHHhhhh---------c---------CCCCCeEEEeCC
Q psy10210        184 CARMFNGG------------PETCGCMTSGGTESIMMACKAYRDYAREE---------K---------GISLPEIVLPTT  233 (435)
Q Consensus       184 la~l~g~~------------~~~~~~~t~ggteai~~a~~a~~~~~~~~---------~---------g~~~~~viv~~~  233 (435)
                      ++++++..            ....+++|+|||+|+..|+.++|+.....         .         |.++..|++++.
T Consensus       138 l~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~  217 (522)
T TIGR03799       138 MHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSER  217 (522)
T ss_pred             HHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCC
Confidence            99998532            22468999999999999999999864211         1         224678999999


Q ss_pred             CchhHHHHHHHcCC---EEEEEecCCCccccHHHHHHHhh----cC--ceEEEEeCCCCCcccccCHHHHHHHHHHcCCc
Q psy10210        234 AHPAFDKAANYFGM---KVKHIRLTSSYTVDLAALQSAIT----GN--TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP  304 (435)
Q Consensus       234 ~~~~~~~~~~~~g~---~v~~vp~~~~~~~d~~~l~~~i~----~~--~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~  304 (435)
                      +|+++.++++.+|+   +++.||+|+++++|+++|+++|.    ++  +.+|+.+.+++.+|.+||+++|+++|++||+|
T Consensus       218 ~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~  297 (522)
T TIGR03799       218 GHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCH  297 (522)
T ss_pred             chHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCe
Confidence            99999999999998   79999999999999999999986    23  45666668899999999999999999999999


Q ss_pred             EEEeccccchhhhcccccCCCCCCCCCC-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC----CCCC
Q psy10210        305 VHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP----GGNY  379 (435)
Q Consensus       305 livD~~~~~~~~~~~~~~g~~~~~~d~~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~----gg~~  379 (435)
                      +|||+||+++...+.+..      ..+. ..++|++++|+|||+++|.|+|+++++++.+.+. +...++|.    +..+
T Consensus       298 lHVDaA~gg~~~~~~~~r------~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~-~~~~~~Yl~~~~~~d~  370 (522)
T TIGR03799       298 FHVDAAWGGATLLSNTYR------HLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA-IEHHAEYILRKGSKDL  370 (522)
T ss_pred             EEEEchhhhHHHhCHHHH------HHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH-hccCcchhcCCCCCcc
Confidence            999999998766432111      1122 2368999999999999999999999999876432 22223342    2235


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc---CCccccc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL---SDLWLYL  433 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l---~~l~~~~  433 (435)
                      +..++.|||++.++ +.|++++.+|.+||.+.+++..+.++++.+.+   ++++++.
T Consensus       371 ~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~  426 (522)
T TIGR03799       371 GSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT  426 (522)
T ss_pred             ccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec
Confidence            56788999999875 79999999999999999999888877776654   4555443

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=100.00  E-value=2.2e-33  Score=288.63  Aligned_cols=317  Identities=21%  Similarity=0.332  Sum_probs=248.2

Q ss_pred             CCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHH
Q psy10210        108 PSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCAR  186 (435)
Q Consensus       108 P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~  186 (435)
                      .......+++++++.+.+..+...|.++ .+-+..+. .+.+...+++.+....+.|...++.+|...++|.++.+|+|+
T Consensus        56 ~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~-~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~  134 (608)
T TIGR03811        56 TKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGHMNS-ETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFAT  134 (608)
T ss_pred             ccCccCHHHHHHHHHHHHhcCCCCCCCccceEEECcC-CCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHH
Confidence            3333567899999999888777888766 65555543 555666677777777777888999999999999999999999


Q ss_pred             HhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh----hc-----------------------------------------
Q psy10210        187 MFNGGPETCGCMTSGGTESIMMACKAYRDYARE----EK-----------------------------------------  221 (435)
Q Consensus       187 l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~----~~-----------------------------------------  221 (435)
                      ++|.++. .+.+|+|||+|+..++.++|+...-    +.                                         
T Consensus       135 l~G~~~~-~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~  213 (608)
T TIGR03811       135 LMGYKNG-WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSA  213 (608)
T ss_pred             HhCCCCC-CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhcc
Confidence            9999874 8999999999999999999875310    00                                         


Q ss_pred             ----CCCC-CeEEEeCCCchhHHHHHHHcCC---EEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCccc
Q psy10210        222 ----GISL-PEIVLPTTAHPAFDKAANYFGM---KVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGT  287 (435)
Q Consensus       222 ----g~~~-~~viv~~~~~~~~~~~~~~~g~---~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~  287 (435)
                          ...+ .+++++...|+++.+++..+|+   .++.||+|+++++|+++|+++|.+      .+.+|+.+.+++.+|.
T Consensus       214 ~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Ga  293 (608)
T TIGR03811       214 RSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGA  293 (608)
T ss_pred             ccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcc
Confidence                0111 2689999999999999999999   599999999999999999999864      3678999999999999


Q ss_pred             ccCHHHHHHHH---HHcCC--cEEEeccccchhhh-cccccCCCCCCCC-----------C----------------CCC
Q psy10210        288 MDDIGAIAKLG---EKYGI--PVHVDCCLGGFLAP-FMSAAGYPLPPFD-----------F----------------SLP  334 (435)
Q Consensus       288 ~~~i~~i~~la---~~~~~--~livD~~~~~~~~~-~~~~~g~~~~~~d-----------~----------------~~~  334 (435)
                      +||+++|+++|   +++|+  |+|||+||||++.+ +....+... |++           |                ...
T Consensus       294 iDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~-p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle  372 (608)
T TIGR03811       294 VDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFI-PYDDLQEVHAEYGVFTEKKEYISREVYNAYKAIS  372 (608)
T ss_pred             cCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccccc-ccchhhcccccccccccccccccHhHHHHHhcCc
Confidence            99999999999   67888  69999999998632 222111100 110           1                135


Q ss_pred             CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC---C----CCCCCCccccCCCchHHHHHHHHHHHh--cH
Q psy10210        335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP---G----GNYGSPSVSGSRSGGIIATCWAAMMYF--GF  405 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~---g----g~~~~~~~~gsr~~~~ia~~~a~l~~~--g~  405 (435)
                      ++||+++|+||+|+.|+++|++++|++.+++.. ....+|.   +    ...+..++.|||+++..+++|++++.+  |.
T Consensus       373 ~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~-~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~  451 (608)
T TIGR03811       373 EAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVI-SYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNV  451 (608)
T ss_pred             CceEEEeCcccccccCCCeEEEEEeCHHHHHHH-hcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCH
Confidence            689999999999999999999999999754421 1122221   1    123456789999998778999999998  99


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        406 EAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       406 ~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +||.+.+++..+.++.+.+.|..
T Consensus       452 ~Gyg~~i~~~i~~A~~~~~~L~~  474 (608)
T TIGR03811       452 TGYGKLIGASIEGAHRFYDFLNN  474 (608)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998887776654

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.98  E-value=4e-30  Score=255.75  Aligned_cols=299  Identities=32%  Similarity=0.517  Sum_probs=231.1

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      .++.++++.+.++.++ +..+. ..++.......|.+++++.+++...    ...+..+++..+++.++++++++++|.+
T Consensus         2 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~~g~~   75 (371)
T PRK13520          2 LSEEEILEELEEYRSE-DLKYE-RILSSMCTEPHPIARKAHEMFLETN----LGDPGLFPGTAKLEEEAVEMLGELLHLP   75 (371)
T ss_pred             CCHHHHHHHHHHHHhc-CCCHH-HeeeeeecCchHHHHHHHHHHHhcC----CCCcccCccHHHHHHHHHHHHHHHhCCC
Confidence            5688999999998876 44443 2444444445888888888877652    2222335678888999999999999987


Q ss_pred             CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc
Q psy10210        192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG  271 (435)
Q Consensus       192 ~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~  271 (435)
                      +. ++++|+||++++..+++++++....    ++++|++++++|+++.+.++..|++++.+|+++++.+|++++++++++
T Consensus        76 ~~-~~~~~~ggt~a~~~a~~~~~~~~~~----~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~  150 (371)
T PRK13520         76 DA-YGYITSGGTEANIQAVRAARNLAKA----EKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD  150 (371)
T ss_pred             CC-CeEEecCcHHHHHHHHHHHHhhccC----CCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh
Confidence            65 7899999999999999988754211    234699999999999999999999999999988888999999999998


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccC
Q psy10210        272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK  351 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~  351 (435)
                      ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+++..++...    ...+++...++|++++++|||+.+|.
T Consensus       151 ~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~----~~~~~~~~~~vd~~~~s~~K~~~a~~  226 (371)
T PRK13520        151 NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDD----PPNFDFSLPGVDSITIDPHKMGLAPI  226 (371)
T ss_pred             CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcC----CCCccccCCCCceEEECCccccCccC
Confidence            89888888999999999999999999999999999999999887654321    12456666789999999999988888


Q ss_pred             CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        352 GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       352 g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++|+++++++++.+... ...+|..+. ......|++++..+++++++++.++.+++.+..++..+..+.+.+.|.
T Consensus       227 ~~G~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~  300 (371)
T PRK13520        227 PAGGILFRDESYLDALA-VDTPYLTSK-KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELK  300 (371)
T ss_pred             CceEEEEcCHHHHHhhc-ccCccccCC-CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHH
Confidence            99988888876554321 122232221 123456788888888999999999888877776666666655555444

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.97  E-value=6.7e-30  Score=245.09  Aligned_cols=259  Identities=24%  Similarity=0.279  Sum_probs=202.9

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcCh-hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFP-GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .|++.+++...+... ++||...+.+. ..+++.++.|+.+|+++|+++ .+++|||||||+++++++........ + .
T Consensus        14 ~~~v~~~m~~~~~~~-fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiFTSG~TEsnNlaI~g~~~a~~~-~-~   89 (386)
T COG1104          14 DPEVLEAMLPYLTEV-FGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIFTSGATESNNLAIKGAALAYRN-A-Q   89 (386)
T ss_pred             CHHHHHHHHHHHHhh-cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC-CeEEEecCCcHHHHHHHHhhHHhhhc-c-c
Confidence            788888888888776 66777665553 678899999999999999999 49999999999999999985433322 1 2


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc---CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~---g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                      ++.+||++..+|+++.+.++++   |.+|.++|++.+|.+|+++|+++++++|.+|.+.+.||.+|++.|+++|+++|++
T Consensus        90 ~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~  169 (386)
T COG1104          90 KGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKE  169 (386)
T ss_pred             CCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHH
Confidence            3457999999999999999988   9999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      +++++|+|++++-           +..|+|+...++|++++|.||+ +||+|+|+++++ +...     ..|...||.  
T Consensus       170 ~~i~fHvDAvQa~-----------Gkipi~~~~~~vD~ls~SaHK~-~GpkGiGaLyv~-~~~~-----~~p~i~GGg--  229 (386)
T COG1104         170 RGILFHVDAVQAV-----------GKIPIDLEELGVDLLSFSAHKF-GGPKGIGALYVR-PGVR-----LEPLIHGGG--  229 (386)
T ss_pred             cCCeEEEehhhhc-----------CceeccccccCcceEEeehhhc-cCCCceEEEEEC-CCCc-----cCceeccCc--
Confidence            9999999999853           3448899888999999999999 799999997774 3332     244455553  


Q ss_pred             CCccccCCCc----hHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhc-CCc
Q psy10210        381 SPSVSGSRSG----GIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNL-SDL  429 (435)
Q Consensus       381 ~~~~~gsr~~----~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l-~~l  429 (435)
                        +..|-|+|    ..+++.-.+++..  ..+...+++.++++.+.+.+.+. +.+
T Consensus       230 --QE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~  283 (386)
T COG1104         230 --QERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDV  283 (386)
T ss_pred             --CCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence              33444444    3343333333222  23445566666666666666643 443

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.97  E-value=7.4e-29  Score=246.88  Aligned_cols=304  Identities=32%  Similarity=0.555  Sum_probs=223.8

Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCccccccc-CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC
Q psy10210        114 RLEILELVSNYLARGHYDWKHGRVSGAVY-YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP  192 (435)
Q Consensus       114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~  192 (435)
                      .+++++++.++.. +..++.++....... ...|...+++...+... ..+   +..+++..+++.++++++++++|+++
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~la~~~g~~~   76 (373)
T TIGR03812         2 EEEVLEELKEYRS-EDLKYSDGRILGSMCTNPHPIAVKAYDMFIETN-LGD---PGLFPGTKKIEEEVVGSLGNLLHLPD   76 (373)
T ss_pred             HHHHHHHHHHHHh-cCCCCCCCcEEEEEeCCchHHHHHHHHHHhhcC-CCC---cccCccHHHHHHHHHHHHHHHhCCCC
Confidence            5788888888544 445554444222222 23555566666655442 122   23356778899999999999999976


Q ss_pred             CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcC
Q psy10210        193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGN  272 (435)
Q Consensus       193 ~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~  272 (435)
                      . ++++++|+++++.+++.+++....  .+.++++|++++++|.++.++++..|++++.+|+++++.+|+++++++++++
T Consensus        77 ~-~~~~~~g~~~~~~~~~~~~~~~~~--~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~  153 (373)
T TIGR03812        77 A-YGYIVSGGTEANIQAVRAAKNLAR--EEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDN  153 (373)
T ss_pred             C-CeEEeccHHHHHHHHHHHHHHHHh--ccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhC
Confidence            5 788899999999999888764211  1112346999999999999999999999999999888889999999999888


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCC
Q psy10210        273 TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG  352 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g  352 (435)
                      +..++...++||+|.+.++++|.++|+++|+++|+|++|+++..++... |...+++++...++|++++++|||+++|.+
T Consensus       154 ~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~-~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~  232 (373)
T TIGR03812       154 TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKK-GYNPPPFDFSLPGVQSITIDPHKMGLSPIP  232 (373)
T ss_pred             cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhc-CCCCCCccccCCCCCEEEECccccCCCcCC
Confidence            8655655689999999999999999999999999999999887654322 233346677777899999999999888988


Q ss_pred             cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        353 SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       353 ~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +|.++++++++.+... ....|..+. ......|+|+...+++++++++.++++++.+..++..+..+++.+.|.+
T Consensus       233 ~G~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~  306 (373)
T TIGR03812       233 AGGILFRSKSYLKYLS-VDAPYLTVK-KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKK  306 (373)
T ss_pred             ceEEEEeCHHHHhhhc-ccCcccCCC-CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8887888777654321 122333221 1234457888888889999999999888777666666666655555544

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=3.6e-29  Score=248.56  Aligned_cols=266  Identities=22%  Similarity=0.231  Sum_probs=203.9

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC--CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH---HHhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH--PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR---DYARE  219 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~---~~~~~  219 (435)
                      +..+.+++.+.+..+. .|...  ........+..++.|+.+++++|+++.++|++|.|+|+++.++..++.   .++  
T Consensus        35 p~~V~~a~~~~~~~~~-an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~g--  111 (405)
T COG0520          35 PQAVLDAVAEYYRRYN-ANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPG--  111 (405)
T ss_pred             CHHHHHHHHHHHHhhc-CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCC--
Confidence            3345555555554331 22221  122345667888999999999999975599999999999999999984   334  


Q ss_pred             hcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                            ++||+++.+|++    +...++..|++++.+|+++++.+|++++++.++++|++|.+++.+|.||++.|+++|+
T Consensus       112 ------deIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~  185 (405)
T COG0520         112 ------DEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIA  185 (405)
T ss_pred             ------CEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHH
Confidence                  459999999999    6667777899999999998999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP  375 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~  375 (435)
                      ++||++|++++||++|+.           ++.++|+...|+|++.+|+|||++||.|+|++++++ ++....   .|...
T Consensus       186 ~la~~~ga~v~VDaaq~~-----------~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~-~~l~~l---~P~~~  250 (405)
T COG0520         186 ELAHEHGALVLVDAAQAA-----------GHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRK-ELLEEL---EPFLG  250 (405)
T ss_pred             HHHHHcCCEEEEECcccc-----------CccCCCchhcCCCEEEEcccccccCCCceEEEEEch-HHHhhc---CCccc
Confidence            999999999999999854           445899999999999999999999999999966665 444432   23333


Q ss_pred             CCCCC---C------------CccccCCCchHHH---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210        376 GGNYG---S------------PSVSGSRSGGIIA---TCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLP  434 (435)
Q Consensus       376 gg~~~---~------------~~~~gsr~~~~ia---~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p  434 (435)
                      ||...   +            ....|+.+...+.   ++...++.+|.+.+.++.+++.+++.+.+++++++..|.|
T Consensus       251 gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~  327 (405)
T COG0520         251 GGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGP  327 (405)
T ss_pred             CCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence            33210   0            1122344333333   3344455667777888888888888999999999988875

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.96  E-value=3.4e-28  Score=239.50  Aligned_cols=240  Identities=36%  Similarity=0.486  Sum_probs=191.5

Q ss_pred             HHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhh---c---CC
Q psy10210        151 LLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREE---K---GI  223 (435)
Q Consensus       151 ~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~---~---g~  223 (435)
                      .+.+.+....+.+...++.++...++|+++++++++++|.+ ++.++++|+|||+|+.+++.+++.+...+   .   ..
T Consensus        14 ~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~   93 (345)
T cd06450          14 LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGI   93 (345)
T ss_pred             HHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccccc
Confidence            33333333323333446678899999999999999999987 44589999999999999999987642110   0   11


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                      .+++|++++++|+++.++++..|++++.+|+++++.+|++++++++++      +++++++++++||+|.++++++|.++
T Consensus        94 ~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~  173 (345)
T cd06450          94 DKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADL  173 (345)
T ss_pred             CCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHH
Confidence            234789999999999999999999999999987789999999999987      88999999999999999999999999


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      |++||+++|+|++|+.+..++....     ..+....++|++++|+||++++|.|+|+++++                  
T Consensus       174 ~~~~~~~l~vD~a~~~~~~~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------------  230 (345)
T cd06450         174 AEKYDLWLHVDAAYGGFLLPFPEPR-----HLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------  230 (345)
T ss_pred             HHHhCCeEEEechhhHHHhhChhhH-----HHhcCccccCEEEEchhHhhCCCcchHHHHHH------------------
Confidence            9999999999999998876432211     11223357899999999998899999986554                  


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                                     ++++|++++.++.+++.++.++..+..+++.+.|.+
T Consensus       231 ---------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~  266 (345)
T cd06450         231 ---------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRA  266 (345)
T ss_pred             ---------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                           368899999999999998888887776666665544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PLN02651 cysteine desulfurase

Probab=99.96  E-value=7.8e-27  Score=231.64  Aligned_cols=268  Identities=19%  Similarity=0.181  Sum_probs=198.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC-CC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH-PD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~-~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .+++.+++.+.+... +.||.. .. ......++..++++.+++++|.+++ ++++|+|+|+++.+++.++......   
T Consensus        12 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t~~~t~a~~~~l~~~~~~~~~---   86 (364)
T PLN02651         12 DPRVLDAMLPFLIEH-FGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFTSGATESNNLAIKGVMHFYKD---   86 (364)
T ss_pred             CHHHHHHHHHHHHhC-CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHHHHhccC---
Confidence            455666666555432 233322 11 1234567788899999999998765 8999999999999999887532111   


Q ss_pred             CCCCeEEEeCCCchhHHHHHH---HcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAAN---YFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~---~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                       ++++|++++.+|+++...+.   ..|++++.+|+++++.+|+++++++++++++++++++++|+||.+.|+++|.++|+
T Consensus        87 -~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~  165 (364)
T PLN02651         87 -KKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCR  165 (364)
T ss_pred             -CCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHH
Confidence             23469999999998655443   45899999999888889999999999999999999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      ++|+++|+|++++.+..           ++++...|+|++++|+||| ++|.|+|+++++++.+..    ..+.+.||..
T Consensus       166 ~~g~~~~vD~a~~~g~~-----------~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~----l~p~~~g~~~  229 (364)
T PLN02651        166 EKKVLFHTDAAQAVGKI-----------PVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVR----LEPLMSGGGQ  229 (364)
T ss_pred             HcCCEEEEEcchhhCCc-----------ccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCC----CCccccCCCc
Confidence            99999999999975433           6788888999999999999 799999998888754432    2344444433


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcH--HHHHHHHHHHHHHHHHHHHh-cCCcccccC
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGF--EAQVWICVRYHFNYKSCLQN-LSDLWLYLP  434 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~--~g~~~~~~~~~~~~~~~~~~-l~~l~~~~p  434 (435)
                      ......|+.+...++++.++++.+..  +...++.+++.+.+.+.+++ ++++..+.|
T Consensus       230 ~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~  287 (364)
T PLN02651        230 ERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGP  287 (364)
T ss_pred             cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence            22234677777777777777776632  44445556666666666553 566666654

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.95  E-value=2.4e-26  Score=228.57  Aligned_cols=220  Identities=19%  Similarity=0.194  Sum_probs=176.7

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+-|+. ..|+.+.+.+.+.+..+.      . +|++..|.++||+++++.+.+.....                
T Consensus        30 vi~l~iG~Pd~-~~p~~i~~a~~~a~~~~~------~-~Y~~~~G~~~LReaia~~~~~~~~~~----------------   85 (393)
T COG0436          30 VIDLSIGEPDF-PTPEHIIEAAIEALEEGG------T-HYTPSAGIPELREAIAEKYKRRYGLD----------------   85 (393)
T ss_pred             EEEeCCCCCCC-CCCHHHHHHHHHHHhccc------C-CCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence            46677788887 778899999998877532      1 55678899999999999999865421                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---S  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---~  256 (435)
                                .++++++++|+|+++|+.+++.++.++||+        |++++|.|+.|....+..|++++.+|++   .
T Consensus        86 ----------~~~~~eiivt~Ga~~al~~~~~a~~~pGDe--------Vlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~  147 (393)
T COG0436          86 ----------VDPEEEIIVTAGAKEALFLAFLALLNPGDE--------VLIPDPGYPSYEAAVKLAGGKPVPVPLDEEEN  147 (393)
T ss_pred             ----------CCCCCeEEEeCCHHHHHHHHHHHhcCCCCE--------EEEeCCCCcCHHHHHHhcCCEEEEEeCCcCcc
Confidence                      244446999999999999999999999998        9999999999999999999999999975   3


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC-CCCCCCCC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY-PLPPFDFS  332 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~-~~~~~d~~  332 (435)
                      ++.+|+++++++++++|++|++++||||||.+   +.+++|+++|++||+++++||+|.++.+.     +. ......+.
T Consensus       148 ~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd-----~~~~~s~~~~~  222 (393)
T COG0436         148 GFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYD-----GAEHPSILELA  222 (393)
T ss_pred             CCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccC-----CCCcCCHhhcC
Confidence            79999999999999999999999999999999   77999999999999999999999998762     21 11122222


Q ss_pred             CC-CccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        333 LP-GVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       333 ~~-gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      .. ...+..-|++|.. ..+..+|+++..++++.+.
T Consensus       223 ~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~  258 (393)
T COG0436         223 GARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAA  258 (393)
T ss_pred             CCcceEEEEecccccccccccceeEeecChHHHHHH
Confidence            21 2344455788973 2346689977665655544

>KOG1549|consensus

Probab=99.95  E-value=3.4e-26  Score=220.27  Aligned_cols=256  Identities=20%  Similarity=0.214  Sum_probs=192.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~  223 (435)
                      ++.+.+++.+++..+ +.||...-.+-......++.|+.+|+++|+++. +|+||+|+|||+.++++.... +++    .
T Consensus        56 ~~~Vldam~~~~~~~-~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~-dIiFts~ATEs~Nlvl~~v~~~~~~----~  129 (428)
T KOG1549|consen   56 DPRVLDAMLPYLLEY-LGNPHSRSYGWKAEDAVEAAREQVAKLINADPS-DIVFTSGATESNNLVLKGVARFFGD----K  129 (428)
T ss_pred             CHHHHHHHHHHHHHh-hcCCCccccchhhhHHHHHHHHHHHHHhCCCCC-cEEEeCCchHHHHHHHHHhhccccc----c
Confidence            788999999888765 456655512223334466789999999999998 599999999999999998742 232    1


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc---CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~---g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                      .+.+||+.+.+|++....++.+   |++++.+|++.++.+|++.++++|+++|+++.+.+.+|.+|++.|+++|.++|++
T Consensus       130 ~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~  209 (428)
T KOG1549|consen  130 TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICRE  209 (428)
T ss_pred             ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCc
Confidence            2337999999999988777665   9999999999889999999999999999999999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      +++.+|+|+||+           .++.++|....++|+++++.||| ++|+|+|+++++.+.-   .....|...||.-.
T Consensus       210 ~~v~v~~DaAQa-----------vG~i~vDV~eln~D~~s~s~HK~-ygp~~iGaLYvr~~~~---~~~~~p~~~GGgq~  274 (428)
T KOG1549|consen  210 EGVQVHVDAAQA-----------VGKIPVDVQELNADFLSISAHKI-YGPPGIGALYVRRKRP---RLRVEPPLSGGGQE  274 (428)
T ss_pred             CCcEEEeehhhh-----------cCCccccHHHcCchheeeecccc-cCCCcceEEEEccCCC---cccccCcccCCccc
Confidence            999999999995           44568999999999999999999 7898899988886221   22246777777432


Q ss_pred             CCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHH
Q psy10210        381 SPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~  421 (435)
                      ..--.|++........=++.+..  .......++++..+.+..
T Consensus       275 r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~  317 (428)
T KOG1549|consen  275 RGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLM  317 (428)
T ss_pred             cccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence            22223444433333333333332  223444555554444443

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.95  E-value=4e-26  Score=229.86  Aligned_cols=268  Identities=19%  Similarity=0.233  Sum_probs=194.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC--CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH--PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .+.+.+++.+++.... .|+..  ....+...+...++++.+++++|..+++++++|+|+|+++.+++.++....-    
T Consensus        36 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~----  110 (406)
T PRK09295         36 PSQVIDAEAEFYRHGY-AAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNV----  110 (406)
T ss_pred             CHHHHHHHHHHHHhcC-CCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcC----
Confidence            3455566665554322 23221  1123446677778999999999985445899999999999999987631100    


Q ss_pred             CCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                      .++++|++++++|++    +...++..|++++.+|+++++.+|+++++++++++|++|++++++||||.+.|+++|.++|
T Consensus       111 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~  190 (406)
T PRK09295        111 RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALA  190 (406)
T ss_pred             CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHH
Confidence            013459999998876    4556677899999999988888999999999999999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      +++|+++++|++|+.+.           .++++...++|++++|+||+ +||.|+|++++++ ++.+..    +.+.+|.
T Consensus       191 ~~~~~~vivD~a~~~g~-----------~~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~-~~~~~~----~~~~~g~  253 (406)
T PRK09295        191 HQHGAKVLVDGAQAVMH-----------HPVDVQALDCDFYVFSGHKL-YGPTGIGILYVKE-ALLQEM----PPWEGGG  253 (406)
T ss_pred             HHcCCEEEEEcccccCc-----------cccCchhcCCCEEEeehhhc-cCCCCcEEEEEch-HhHhhC----CCcccCC
Confidence            99999999999986442           25677777899999999995 7899999977665 443321    2222221


Q ss_pred             -------------CC---CCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210        379 -------------YG---SPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYLP  434 (435)
Q Consensus       379 -------------~~---~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p  434 (435)
                                   +.   ..-..|+++...++++.++++.+   |.+...++.+++.+.+.+.+++++++..+.|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~  328 (406)
T PRK09295        254 SMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGP  328 (406)
T ss_pred             ceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence                         00   01134677777777777777665   5556666677777777776666776665543

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.95  E-value=9.2e-26  Score=226.83  Aligned_cols=265  Identities=18%  Similarity=0.187  Sum_probs=188.0

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .+.+.+++.+.+... +.|+.....  .....+...++++.+++++|.+++ ++++|+|+|+++.+++.++......   
T Consensus        16 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l~~~~~~---   90 (402)
T TIGR02006        16 DPRVAEKMMPYLTEK-FGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFTSGATESNNLAIKGIAHFYKS---   90 (402)
T ss_pred             CHHHHHHHHHHHHhc-CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHHHHhhcC---
Confidence            345555555554332 233332111  112345677888999999998765 8999999999999999887531111   


Q ss_pred             CCCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                       ++++|+++.++|+++..++   +..|++++.+|+++++.+|+++++++++++++++++++++||||.+.|+++|.++|+
T Consensus        91 -~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~  169 (402)
T TIGR02006        91 -KGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICR  169 (402)
T ss_pred             -CCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHH
Confidence             2346999999999977664   345999999999888889999999999989999999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      ++|+++|+|++++.+..           ++++...++|++++|+||+ ++|.|+|+++++++.....    .+.+.||.+
T Consensus       170 ~~g~~livD~a~a~g~~-----------~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~----~~~~~g~~~  233 (402)
T TIGR02006       170 ERKVFFHVDAAQSVGKI-----------PINVNELKVDLMSISGHKI-YGPKGIGALYVRRKPRVRL----EALIHGGGH  233 (402)
T ss_pred             HcCCEEEEEcchhcCCc-----------ccCccccCCCEEEEehhhh-cCCCceEEEEEccCCCCCC----CceecCCCc
Confidence            99999999999864332           5677777899999999997 6899999988887654322    222333332


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      ......|+.+...+++..++++.+.  .+...++.+++.+.+.+.++.++++..
T Consensus       234 ~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~  287 (402)
T TIGR02006       234 ERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYL  287 (402)
T ss_pred             cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            2222245556555555556665542  333445555555556655555665544

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.95  E-value=7e-26  Score=227.54  Aligned_cols=240  Identities=20%  Similarity=0.213  Sum_probs=179.0

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCC
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGM  247 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~  247 (435)
                      ...+...++++.+++++|.++.+++++|+|+|+++.+++.++....-.    ++++|++++++|++    +...++..|+
T Consensus        57 ~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~----~gd~Vl~~~~~~~s~~~~~~~~~~~~g~  132 (398)
T TIGR03392        57 SLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQ----PGDEIIVSEAEHHANLIPWLMVAQQTGA  132 (398)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCC----CCCEEEECCcchhHHHHHHHHHHHHcCc
Confidence            345667789999999999864458999999999999999987421000    13459999999987    4566788899


Q ss_pred             EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        248 KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       248 ~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      +++.+|++.++.+|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+.+..           
T Consensus       133 ~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----------  201 (398)
T TIGR03392       133 KVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG-----------  201 (398)
T ss_pred             EEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----------
Confidence            999999987788999999999999999999999999999999999999999999999999999964322           


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC----------C-----CCccccCCCchH
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY----------G-----SPSVSGSRSGGI  392 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~----------~-----~~~~~gsr~~~~  392 (435)
                      +++....++|++++|+||+ ++|.|+|+++.+ +++.+..    +.|.+|..          .     ..-..|+.+...
T Consensus       202 ~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~  275 (398)
T TIGR03392       202 PPDVQALDIDFYAFSGHKL-YGPTGIGVLYGK-TELLEAM----PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAG  275 (398)
T ss_pred             CCChhhcCCCEEEEecccc-cCCCceEEEEEc-HHHHhhC----CCeecCCceEeeccccccccCCChhhccCCCCCHHH
Confidence            4566566799999999996 789999996655 4444331    22332210          0     011245666666


Q ss_pred             HHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        393 IATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       393 ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++++.++++.+   |.+...++.+++.+.+.+.+++++++..+
T Consensus       276 ~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~  318 (398)
T TIGR03392       276 VIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSF  318 (398)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            66777777665   44455566666666666666666665543

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.95  E-value=1.6e-25  Score=223.14  Aligned_cols=266  Identities=15%  Similarity=0.160  Sum_probs=192.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCC--CCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPL--HPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~--~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      ++.+++++.+.+.... .++.  .+.......+...++++.+++++|.++.+++++|+|+|+++.+++.++.++++.   
T Consensus        13 p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~---   88 (376)
T TIGR01977        13 PDEVYEAMADFYKNYG-GSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDH---   88 (376)
T ss_pred             CHHHHHHHHHHHHhcC-CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCE---
Confidence            3456666666655421 1111  111112334667788899999999876568999999999999999887666655   


Q ss_pred             CCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                           |+++.++|+++.    ..++..|++++.++.+.++.+|+++++++++++++++++++++||||.+.++++|.++|
T Consensus        89 -----vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~  163 (376)
T TIGR01977        89 -----VITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELA  163 (376)
T ss_pred             -----EEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHH
Confidence                 999999998864    34556699999999887788999999999988999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-  377 (435)
                      +++|+++|+|++++.+..           ++++...++|++++++|||+++|.|+|+++++++.....   ....|.+. 
T Consensus       164 ~~~~~~livD~a~~~g~~-----------~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~---~~~~~~~~~  229 (376)
T TIGR01977       164 QENGIFFILDAAQTAGVI-----------PIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKP---LKSGGTGSH  229 (376)
T ss_pred             HHcCCEEEEEhhhccCcc-----------CCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCc---eecCCCccc
Confidence            999999999999965433           567777899999999999998999999988888753211   11111110 


Q ss_pred             --CC------CCCccccCCCchHHHHHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        378 --NY------GSPSVSGSRSGGIIATCWAAMMYFGFEA---QVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       378 --~~------~~~~~~gsr~~~~ia~~~a~l~~~g~~g---~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                        .+      ......++.+...+++..++++.+...|   ..++.+.+.+.+.+.+++++++..+.
T Consensus       230 ~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~  296 (376)
T TIGR01977       230 SALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYG  296 (376)
T ss_pred             cccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence              00      0001234556666667777777665544   45555666666666666666655543

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.95  E-value=2e-25  Score=220.59  Aligned_cols=267  Identities=20%  Similarity=0.146  Sum_probs=189.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .+.+.+++.+++... +.|+.....  .....+...++++.+++++|.+++ ++++|+|+|+++.+++.++..+++. + 
T Consensus        11 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l~~~~~~-~-   86 (353)
T TIGR03235        11 DPAVAEAMLPWLLEE-FGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFTSGATESNNLAILGLARAGEQ-K-   86 (353)
T ss_pred             CHHHHHHHHHHHHhc-CCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHHHHhccc-C-
Confidence            456677776666432 234432111  223456778899999999999765 8999999999999999988754332 1 


Q ss_pred             CCCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                       .+++|+++..+|+++...   ++..|++++.+|+++++.+|++++++++++++++|++++++||||.+.++++|.++|+
T Consensus        87 -g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~  165 (353)
T TIGR03235        87 -GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLE  165 (353)
T ss_pred             -CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHH
Confidence             124699999999986554   3446999999999888889999999999889999999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      ++|+++|+|++++.+..           ++++...++|++++++||| ++|.|+|+++++++.+...  ...+.+.++.+
T Consensus       166 ~~~~~~ivD~a~~~g~~-----------~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~--~~~~~~~~~~~  231 (353)
T TIGR03235       166 AHEAFFHVDAAQVVGKI-----------TVDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPKA--PLKPIMFGGGQ  231 (353)
T ss_pred             HcCCEEEEEchhhcCCc-----------cccccccCCCEEEeehhhc-CCCCceEEEEEccCccccc--ccCceeeCCCC
Confidence            99999999999864433           6677777899999999999 6899999988887643221  11222333222


Q ss_pred             CCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      ......|+.+...+++..++++.+  +.+...++.+++.+.+.+.++. .++..
T Consensus       232 ~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~  284 (353)
T TIGR03235       232 ERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKL  284 (353)
T ss_pred             cCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEE
Confidence            222334566666666666676655  3333444444444444444433 34443

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>KOG0628|consensus

Probab=99.95  E-value=6.4e-26  Score=216.84  Aligned_cols=314  Identities=15%  Similarity=0.161  Sum_probs=246.1

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ...+...|+.+.+.++|++++.+.+.++..+|.++.+..+-+.| ......+++.+......-.+.+-.+|..+++|.-+
T Consensus        40 ~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa~-~s~~siladmLs~~i~~vGFtW~ssPa~TELE~iv  118 (511)
T KOG0628|consen   40 DLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYFPAG-NSYPSILADMLSGGIGCVGFTWASSPACTELEVIV  118 (511)
T ss_pred             hhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEccCc-cchHHHHHHHHhcccccccceeecCcchHHHHHHH
Confidence            34556778888899999999999999999999988766544443 12223333444433333456677789999999999


Q ss_pred             HHHHHHHhCCCC--------CCceEEcCChHHHHHHHHHHHHHHhhhh--cCC---------CCCeEEEeCCCchhHHHH
Q psy10210        181 IKMCARMFNGGP--------ETCGCMTSGGTESIMMACKAYRDYAREE--KGI---------SLPEIVLPTTAHPAFDKA  241 (435)
Q Consensus       181 ~~~la~l~g~~~--------~~~~~~t~ggteai~~a~~a~~~~~~~~--~g~---------~~~~viv~~~~~~~~~~~  241 (435)
                      -+|++++++.|.        +..+++..+++|+.+.++.+.|...-++  .+.         .+-.+++++-+|.++.++
T Consensus       119 mDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka  198 (511)
T KOG0628|consen  119 MDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKA  198 (511)
T ss_pred             HHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHh
Confidence            999999998763        2478888999999999999988665432  111         134578999999999999


Q ss_pred             HHHcCCEEEEEecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210        242 ANYFGMKVKHIRLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL  315 (435)
Q Consensus       242 ~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~  315 (435)
                      +...|++++.+|.|.++.++.+.|+++|.++      +.+++.+.+++.+...|++.+|..+|+++|+|+|||++|+|-.
T Consensus       199 ~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa  278 (511)
T KOG0628|consen  199 CLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSA  278 (511)
T ss_pred             HhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhcccc
Confidence            9999999999999999999999999999763      5788888888877788999999999999999999999999876


Q ss_pred             hhcccccCCCCCCCCCCCCC---ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC-------CCCCCCccc
Q psy10210        316 APFMSAAGYPLPPFDFSLPG---VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG-------GNYGSPSVS  385 (435)
Q Consensus       316 ~~~~~~~g~~~~~~d~~~~g---vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g-------g~~~~~~~~  385 (435)
                      +.+.        .++....|   +|++.++.|||+..--.|+.+++++.......+...|.+.-       ..|...++.
T Consensus       279 ~iCp--------E~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqip  350 (511)
T KOG0628|consen  279 FICP--------EFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIP  350 (511)
T ss_pred             ccCH--------HHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccc
Confidence            6433        34433344   59999999999988889999999998555444433333322       235567788


Q ss_pred             cCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        386 GSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       386 gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                      -+|++.++ ..|..++.+|-+++++++++..+.+++.-+
T Consensus       351 l~rRfRSL-KlWfv~R~~Gve~lq~~iR~h~~La~~fe~  388 (511)
T KOG0628|consen  351 LGRRFRSL-KLWFVLRSYGVENLQNYIREHVRLAKEFET  388 (511)
T ss_pred             cccchhhH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            89999886 999999999999999999999887766544

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.94  E-value=2.1e-25  Score=222.65  Aligned_cols=288  Identities=19%  Similarity=0.223  Sum_probs=211.8

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHhCCCCCCC--------CCccccc--------ccCC---hHhHHHHHHHHHHhhcCCCCC
Q psy10210        105 LELPSQGRNRLEILELVSNYLARGHYDWK--------HGRVSGA--------VYYY---QQDLVDLLTEVFGLTSYTNPL  165 (435)
Q Consensus       105 ~~~P~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~--------~~~g---~~~l~~~i~~~~~~~~~~~~~  165 (435)
                      ..+|++|.+.+.|...+.+....+.++|.        ++++++.        .++|   ..+|.+              .
T Consensus        28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~--------------~   93 (444)
T TIGR03531        28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVA--------------P   93 (444)
T ss_pred             CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCCCCcccccc--------------c
Confidence            46799999999999999999888888887        5555444        4444   222222              2


Q ss_pred             CCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH-HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH
Q psy10210        166 HPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA  242 (435)
Q Consensus       166 ~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt-eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~  242 (435)
                      +|..  ++...++..++.+.+++++|.+.....++++||| .++.+++.+++..     +.++++||++..+|.+..+++
T Consensus        94 q~ka~gss~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-----~~~gd~VI~p~~th~S~~kAi  168 (444)
T TIGR03531        94 QPKAAGSSLLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-----RPKAKYVIWPRIDQKSCIKAI  168 (444)
T ss_pred             CccccCccHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-----CCCCCEEEEECcChHHHHHHH
Confidence            3322  2347788999999999999987544578899999 6888888887531     112346999999999999999


Q ss_pred             HHcCCEEEEEec--C-CCccccHHHHHHHhhc---CceEEEEeCC-CCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210        243 NYFGMKVKHIRL--T-SSYTVDLAALQSAITG---NTVMLVGSMP-NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL  315 (435)
Q Consensus       243 ~~~g~~v~~vp~--~-~~~~~d~~~l~~~i~~---~~~~v~~~~p-~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~  315 (435)
                      ...|++++.+|+  + +++.+|+++++++|++   ++.++++..| ++++|..+|+++|+++|++||+|+|+|+||+.+.
T Consensus       169 ~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~  248 (444)
T TIGR03531       169 STAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS  248 (444)
T ss_pred             HHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC
Confidence            999999999995  3 6789999999999985   4455555555 4566788999999999999999999999998643


Q ss_pred             hhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHH
Q psy10210        316 APFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIAT  395 (435)
Q Consensus       316 ~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~  395 (435)
                      ..+...     ..-......+|++++|+||++..|.+.|+++++++++.+..   ...|.+..          .......
T Consensus       249 ~~~~~~-----~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i---~~~y~g~~----------~~s~~~~  310 (444)
T TIGR03531       249 NKYMEL-----INKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEI---SKSYPGRA----------SASPSLD  310 (444)
T ss_pred             hhhhhh-----hhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHH---HHhccCCC----------CChHHHH
Confidence            211100     00011111379999999999888888788778888876543   23343321          1122357


Q ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        396 CWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       396 ~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      +|++++.+|.++|.+.+++..+.++.+.+.|.++
T Consensus       311 ~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l  344 (444)
T TIGR03531       311 VLITLLSLGSKGYLELLKERKEMYKYLKELLQKL  344 (444)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999998888877776666554

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.94  E-value=3.5e-25  Score=221.02  Aligned_cols=263  Identities=22%  Similarity=0.207  Sum_probs=190.4

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+++.+++.+.+.. .+.|+.... ..+...+...++++.+++++|.+++ ++++|+|+|+++.+++.++.....     
T Consensus        12 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t~~~t~a~~~al~~~~~~~~-----   84 (379)
T TIGR03402        12 DPEVLEAMLPYFTE-YFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFTSGGTESDNTAIKSALAAQP-----   84 (379)
T ss_pred             CHHHHHHHHHHHHh-cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHHHHhcC-----
Confidence            45677777776654 234444322 2245677788999999999999765 899999999999999998753111     


Q ss_pred             CCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                      ++++|+++..+|+++...+   +..|++++.+|+++++.+|+++++++++++++++++++++||||.+.|+++|.++|++
T Consensus        85 ~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~  164 (379)
T TIGR03402        85 EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKE  164 (379)
T ss_pred             CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHH
Confidence            1235999999999876544   3459999999998788899999999999999999999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      +|+++|+|++++..           ..++++...++|++++|+||+ ++|.|+|+++++++..      ..|.+.|+...
T Consensus       165 ~g~~vivD~~~~~g-----------~~~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~v~~~~~------~~p~~~g~~~~  226 (379)
T TIGR03402       165 RGALFHTDAVQAVG-----------KIPIDLKEMNIDMLSLSGHKL-HGPKGVGALYIRKGTR------FRPLLRGGHQE  226 (379)
T ss_pred             cCCEEEEECccccc-----------ccccCcccCCCCEEEEcHHHc-CCCCceEEEEECCCCC------CCCcccCCccC
Confidence            99999999998643           236788788999999999995 7999999988875431      23334433221


Q ss_pred             CCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHh-cCCcccc
Q psy10210        381 SPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQN-LSDLWLY  432 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~-l~~l~~~  432 (435)
                      ...-.|+.+...+.+..++++.+-  .+...++.+++.+.+.+.++. ++++..+
T Consensus       227 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~  281 (379)
T TIGR03402       227 RGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLN  281 (379)
T ss_pred             CCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence            112245555555555555555442  233334555555566665553 5655544

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>KOG0257|consensus

Probab=99.94  E-value=8.4e-26  Score=214.85  Aligned_cols=216  Identities=19%  Similarity=0.128  Sum_probs=177.4

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +..+.|+. .+|+.+.+.+.+.+...      ....|+...|.|+|++++++.+..+.+.+                   
T Consensus        36 LgqGfp~~-~~P~fv~ea~~~~~~~~------~~~qYt~~~G~p~L~~aL~k~~se~~~~~-------------------   89 (420)
T KOG0257|consen   36 LGQGFPDF-PPPKFVTEAAKNAAKEP------STNQYTRGYGLPQLRKALAKAYSEFYGGL-------------------   89 (420)
T ss_pred             ccCCCCCC-CCcHHHHHHHHHHhccc------hhccccccCCchHHHHHHHHHHHHHhccc-------------------
Confidence            56677887 78899999999987752      34556677799999999999999865443                   


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-------
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-------  255 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-------  255 (435)
                             ..++++|++|+|+.+++..++.+++++||+        |++.+|.|.+|.....+.|.+.+.||..       
T Consensus        90 -------~~~~~eVlVT~GA~~ai~~~~~~l~~~GDe--------Vii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~  154 (420)
T KOG0257|consen   90 -------LDPDDEVLVTAGANEAISSALLGLLNPGDE--------VIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVS  154 (420)
T ss_pred             -------cCCcccEEEecCchHHHHHHHHHHcCCCCE--------EEEecCcchhhhhHHhhcCCcceeecccccccccc
Confidence                   134458999999999999999999999998        9999999999999999999999999875       


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                       .++.+|.++++.+++++|++|++++||||||.+   +.+++|+++|++||+++|+|++|..+++.     |..+..+..
T Consensus       155 s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d-----~~~h~r~as  229 (420)
T KOG0257|consen  155 SSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYD-----GNKHIRIAS  229 (420)
T ss_pred             CccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhC-----CCcceeeec
Confidence             468899999999999999999999999999999   78999999999999999999999887763     322334443


Q ss_pred             CCCCc---cEEEecCCCCCCccCC--cEEEEEeCCcccccc
Q psy10210        332 SLPGV---TSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQ  367 (435)
Q Consensus       332 ~~~gv---d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~  367 (435)
                      . +|.   ++-+.|+.|+ ++-.|  +||++. ++.+....
T Consensus       230 l-Pgm~ertitvgS~gKt-f~~TGWrlGW~ig-p~~L~~~~  267 (420)
T KOG0257|consen  230 L-PGMYERTITVGSFGKT-FGVTGWRLGWAIG-PKHLYSAL  267 (420)
T ss_pred             C-CchhheEEEeccccce-eeeeeeeeeeeec-hHHhhhhH
Confidence            3 554   6667789998 45544  699666 66665443

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.94  E-value=9.1e-25  Score=223.48  Aligned_cols=305  Identities=20%  Similarity=0.212  Sum_probs=211.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccc--cccCChHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSG--AVYYYQQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIK  182 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~  182 (435)
                      .+|+  .++.++++.+.+...++..... ...+.  ....-.|.+.+.+.+.-.. ...+|++++ .+++..+++.++++
T Consensus        45 ~~~~--~se~~~~~~~~~l~~~n~~~~~-~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~e~~sqG~lel~~~~~~  120 (481)
T PRK04366         45 ELPE--VSELEVVRHYTRLSQKNYGVDT-GFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQPEETVQGALELMYELQE  120 (481)
T ss_pred             CCCC--CCHHHHHHHHHHHHhcCCCCCc-ceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCChhhhhHHHHHHHHHHH
Confidence            5676  8999999999998877543221 22222  2222367777877765222 244688887 78999999999999


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD  261 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d  261 (435)
                      ++++++|.+.  ..+..++|+.+...++..++.... .+|. ++++|+++++.|+++...++..|++++.+|+++++.+|
T Consensus       121 ~la~l~G~~~--~~l~~~~GA~a~~~~l~~~r~~~~-~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D  197 (481)
T PRK04366        121 WLKEITGMDA--VTLQPAAGAHGELTGLLMIRAYHE-ARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVD  197 (481)
T ss_pred             HHHHHhCCCc--eEEEeCcHHHHHHHHHHHHHHHhh-ccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcC
Confidence            9999999863  233434454444443332221111 1221 35679999999999999999999999999998789999


Q ss_pred             HHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        262 LAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       262 ~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      +++++++++++|++|++++|| |+|.+ +++++|+++|+++|+++++|+++....+      |    ..+....|+|+++
T Consensus       198 ~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~------g----~~~~~~~GaD~~~  266 (481)
T PRK04366        198 LEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL------G----KARPGDMGFDVVH  266 (481)
T ss_pred             HHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhc------c----cCCccccCCCEEE
Confidence            999999999999999999998 89988 6899999999999999999999853322      1    2344566899999


Q ss_pred             ecCCCCCCccCC-----cEEEEEeCCccccccccccCCCCCCCCC-----C----CccccCCCchHHHHHHHHHHHhcHH
Q psy10210        341 VDTHKYGFTPKG-----SSVVLYRDLKYKHCQYFVTSDWPGGNYG-----S----PSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       341 ~s~hK~~~~p~g-----~g~il~~~~~~~~~~~~~~~~~~gg~~~-----~----~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                      +++|||+++|.|     +|++.++++ +.+........+.+..|.     .    ..-+++..+..+.++|..+..+|.+
T Consensus       267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~  345 (481)
T PRK04366        267 LNLHKTFSTPHGGGGPGSGPVGVKEE-LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAE  345 (481)
T ss_pred             EechhhcCCCCCCCCCCeeeeeehhh-hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHH
Confidence            999999876654     467666654 322210000001111000     0    0011122234556899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        407 AQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      |+++..+++.+.+.++.++|.++
T Consensus       346 Gl~~~a~~~~~~a~~l~~~L~~~  368 (481)
T PRK04366        346 GLREVSEDAVLNANYLKARLKDI  368 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhh
Confidence            99998888777777766666543

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.94  E-value=2.8e-25  Score=223.41  Aligned_cols=241  Identities=20%  Similarity=0.216  Sum_probs=178.1

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g  246 (435)
                      ....+...++++.+++++|+.+.+++++|+|+|+++.+++.++....-.    ++++|++++++|++    +...++..|
T Consensus        59 ~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~----~gd~vl~~~~~~~s~~~~~~~~~~~~g  134 (401)
T PRK10874         59 QRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQ----PGDEIIVSEAEHHANLVPWLMVAQQTG  134 (401)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCC----CcCEEEECCcchHHHHHHHHHHHHHhC
Confidence            3456677789999999999954458999999999999999987421000    12459999999976    556678889


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      ++++.+|++.++.+|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+.+..          
T Consensus       135 ~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~----------  204 (401)
T PRK10874        135 AKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF----------  204 (401)
T ss_pred             CEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccc----------
Confidence            9999999988888999999999999999999999999999999999999999999999999999864322          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC----------CC-----CCccccCCCch
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN----------YG-----SPSVSGSRSGG  391 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~----------~~-----~~~~~gsr~~~  391 (435)
                       +++....++|++++|+||+ ++|.|+|+++.+ +++.+..    ..|.+|.          +.     ..-..|+.+..
T Consensus       205 -~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~  277 (401)
T PRK10874        205 -PADVQALDIDFYAFSGHKL-YGPTGIGVLYGK-SELLEAM----SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVA  277 (401)
T ss_pred             -cCCchhcCCCEEEEecccc-cCCCccEEEEEc-hHHHhcC----CCeecCCcceEeeccCccCCCCChhhccCCCcCHH
Confidence             4555566799999999996 789999996655 4544331    2232221          00     01123556655


Q ss_pred             HHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        392 IIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       392 ~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      .++++.+++..+   |.+...+++++..+.+.+.+++++++..+
T Consensus       278 ~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~  321 (401)
T PRK10874        278 GVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSF  321 (401)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            566666666554   44445566666666666666666666544

>KOG0629|consensus

Probab=99.94  E-value=4.8e-26  Score=215.38  Aligned_cols=316  Identities=21%  Similarity=0.190  Sum_probs=245.2

Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHhC----CCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210        102 EYFLELPSQGRNRLEILELVSNYLAR----GHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME  177 (435)
Q Consensus       102 ~~~~~~P~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e  177 (435)
                      .+..++|+.+.+-++|++..++.+.-    ++.+|.+...++.      +......+++....++|.+.+++.|.+.-||
T Consensus        70 l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprffNQl~~gl------D~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE  143 (510)
T KOG0629|consen   70 LFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRFFNQLSSGL------DPIGLAGEWLTSTANTNMFTYEIAPVFVLME  143 (510)
T ss_pred             HhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcchhhhccCC------CHHHHHHHHHHhccCCCCceEEecceEEeeh
Confidence            44568899889999999999887653    2333333222222      3445666777778888999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhh---hhcCC---CCCeEEEeCCCchhHHHHHHHcC---CE
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR---EEKGI---SLPEIVLPTTAHPAFDKAANYFG---MK  248 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~---~~~g~---~~~~viv~~~~~~~~~~~~~~~g---~~  248 (435)
                      .++...+.++.|.+...++++++||+-++..++.+.+...-   +.+|.   +.-.+.+++.+|+++.+++..+|   -.
T Consensus       144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~  223 (510)
T KOG0629|consen  144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH  223 (510)
T ss_pred             HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence            99999999999998876899999999999999999875432   23443   33344567779999999999998   58


Q ss_pred             EEEEecCCCccccHHHHHHHhhc---C---ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITG---N---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~---~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      ++.|++++.|++++++||+.|.+   +   +.+|..+.+++-.|..||++.|+++|++|++|+|||+|+||+++....+.
T Consensus       224 c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R  303 (510)
T KOG0629|consen  224 CIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHR  303 (510)
T ss_pred             eEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhH
Confidence            99999999999999999998853   3   68899999999999999999999999999999999999999776432221


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc------ccccCCCCC---CCCCCCccccCCCchHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ------YFVTSDWPG---GNYGSPSVSGSRSGGII  393 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~------~~~~~~~~g---g~~~~~~~~gsr~~~~i  393 (435)
                      .    .+.. ...++|++.++||++++|..||+++++.+.++.+.      |.++.+-.-   -..+...+++.|.... 
T Consensus       304 ~----kl~G-iera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~-  377 (510)
T KOG0629|consen  304 H----KLTG-IERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDV-  377 (510)
T ss_pred             h----hccC-ccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccH-
Confidence            1    1222 22369999999999999999999999998865542      222222111   1124466777777765 


Q ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        394 ATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       394 a~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      ...|..|+.-|..||++++.++.+.++++.+++.+-
T Consensus       378 FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer  413 (510)
T KOG0629|consen  378 FKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRER  413 (510)
T ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            489999999999999999999999988888776543

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.94  E-value=3.7e-25  Score=220.30  Aligned_cols=266  Identities=18%  Similarity=0.156  Sum_probs=188.5

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC--CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH---Hhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH--PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD---YARE  219 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~---~~~~  219 (435)
                      .+.+.+++.+.+..+ +.+|..  ....+...+...++++.+++++|.++.+++++|+|+|+++.+++.++..   +++ 
T Consensus        12 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~-   89 (373)
T cd06453          12 PQPVIDAIVDYYRHY-NANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGD-   89 (373)
T ss_pred             CHHHHHHHHHHHHhc-CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCC-
Confidence            345566666555443 233322  1223556777888999999999987445899999999999999999875   444 


Q ss_pred             hcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                             +|++++++|++.    ...++..|++++.+|++.++.+|++++++++++++++|++++++||||.+.++++|.
T Consensus        90 -------~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~  162 (373)
T cd06453          90 -------EIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIG  162 (373)
T ss_pred             -------EEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHH
Confidence                   499999999984    445667899999999988888999999999999999999999999999999999999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC-
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW-  374 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~-  374 (435)
                      ++|++||+++|+|++++.+..           ++++...++|++++|+||++ ++.|+|+++.++ ++.+........| 
T Consensus       163 ~~~~~~~~~li~D~a~~~~~~-----------~~~~~~~~~d~~~~s~~K~~-~~~g~g~~~~~~-~~~~~~~~~~~g~~  229 (373)
T cd06453         163 EIAHEAGVPVLVDGAQSAGHM-----------PVDVQDLGCDFLAFSGHKML-GPTGIGVLYGKE-ELLEEMPPYGGGGE  229 (373)
T ss_pred             HHHHHcCCEEEEEhhhhcCce-----------eeeccccCCCEEEecccccc-CCCCcEEEEEch-HHhhcCCCeecCCC
Confidence            999999999999999865433           44555668999999999995 558889866654 4433211111100 


Q ss_pred             -------CCCCCCCC---ccccCCCchHHHHHHHHHHHhcHHHHH---HHHHHHHHHHHHHHHhcCCcccc
Q psy10210        375 -------PGGNYGSP---SVSGSRSGGIIATCWAAMMYFGFEAQV---WICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       375 -------~gg~~~~~---~~~gsr~~~~ia~~~a~l~~~g~~g~~---~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                             ....+...   ...++.+...+.+.+++++.++.+++.   ++.++..+.+.+.+++++++..+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~  300 (373)
T cd06453         230 MIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVY  300 (373)
T ss_pred             ccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence                   00011100   112455556666778888777655554   44455555555555556555543

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.94  E-value=7.1e-25  Score=219.03  Aligned_cols=237  Identities=21%  Similarity=0.172  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH---HHHcCCEEEEEe
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA---ANYFGMKVKHIR  253 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp  253 (435)
                      ..+.++.+++.+|+.+.+++++|+|+|+++.++++++......  ...+++|+++..+|+++...   ++..|++++.+|
T Consensus        44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~--~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~  121 (382)
T TIGR03403        44 IAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEIL--KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLP  121 (382)
T ss_pred             HHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcc--cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEe
Confidence            3344445555666633458999999999999999987321000  00123599999999887655   445799999999


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      +++++.+|+++++++++++++++++++++||||.+.|+++|.++|+++|+++|+|++++...           .++++..
T Consensus       122 ~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~-----------~~~~~~~  190 (382)
T TIGR03403       122 INEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK-----------IPVDVQK  190 (382)
T ss_pred             cCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCC-----------CccCccc
Confidence            98888899999999999999999999999999999999999999999999999999986332           2567777


Q ss_pred             CCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHH
Q psy10210        334 PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWI  411 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~  411 (435)
                      .++|++++|+||| +||.|+|++++++...      ..+.+.|+.+......|+.+...+.++..+++...  .+...++
T Consensus       191 ~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~------~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~  263 (382)
T TIGR03403       191 AGVDFLSFSAHKF-HGPKGVGGLYIRKGVE------LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSH  263 (382)
T ss_pred             cCCCEEEEcchhh-CCCCceEEEEECCCCC------CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHH
Confidence            8999999999998 7899999988776431      23444443322222345555555555555655442  2333455


Q ss_pred             HHHHHHHHHHHHHhcCCccccc
Q psy10210        412 CVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       412 ~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                      .++..+.+.+.+++++++..+.
T Consensus       264 ~~~l~~~l~~~L~~~~~~~~~~  285 (382)
T TIGR03403       264 VRRLRDRLEDALLELPDVFVVG  285 (382)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEC
Confidence            5556666666666666666553

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.94  E-value=5.6e-25  Score=222.73  Aligned_cols=236  Identities=19%  Similarity=0.219  Sum_probs=180.6

Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhhhhcCCCCCeEEEeCCCchh----HHHHHHH
Q psy10210        173 VCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYAREEKGISLPEIVLPTTAHPA----FDKAANY  244 (435)
Q Consensus       173 ~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~  244 (435)
                      ..+...++++.+++++|.++++++++|+|+|+++.+++.++.    .++        ++|++++++|++    +...++.
T Consensus        74 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~g--------d~vl~~~~~~~s~~~~~~~~a~~  145 (424)
T PLN02855         74 ATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPG--------DEVILSVAEHHSNIVPWQLVAQK  145 (424)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCc--------CEEEECCCccHHHHHHHHHHHHH
Confidence            345567888999999999654589999999999999988642    233        459999998886    4556677


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .|++++.+|++.++.+|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+..          
T Consensus       146 ~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g----------  215 (424)
T PLN02855        146 TGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVP----------  215 (424)
T ss_pred             cCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcC----------
Confidence            8999999999866779999999999999999999999999999999999999999999999999998532          


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC------------C---CCccccCCC
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY------------G---SPSVSGSRS  389 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~------------~---~~~~~gsr~  389 (435)
                       ..++++...++|++++|+||+ +||.|+|++++++ ++.+..    +.|.+|..            .   ..-..|+++
T Consensus       216 -~~~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~-~~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~  288 (424)
T PLN02855        216 -HMPVDVQTLGADFLVASSHKM-CGPTGIGFLWGKS-DLLESM----PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPA  288 (424)
T ss_pred             -CcCCCchhcCCCEEEeecccc-cCCCccEEEEEch-hhhhcC----CCEecCCCceeeeecCccccCCChhhccCCChH
Confidence             236677777899999999996 7899999977664 443321    22322211            0   001246677


Q ss_pred             chHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        390 GGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       390 ~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                      ...++++.++++.+   |.+...++++++.+.+.+.+++++++..+.
T Consensus       289 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~  335 (424)
T PLN02855        289 IGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYG  335 (424)
T ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence            77777777777754   666666677777777777777777776664

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.94  E-value=7.3e-25  Score=220.50  Aligned_cols=271  Identities=21%  Similarity=0.206  Sum_probs=191.8

Q ss_pred             HhHHHHHHHHHHhhcCCCCCCC--CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        146 QDLVDLLTEVFGLTSYTNPLHP--DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       146 ~~l~~~i~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      +.+.+++.+.+... +.++...  ...+...+...++++.+++++|.++.+++++|+|+|+++.+++.++......    
T Consensus        32 ~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~----  106 (403)
T TIGR01979        32 QQVIDAVAEYYRNS-NANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLK----  106 (403)
T ss_pred             HHHHHHHHHHHHhC-CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCC----
Confidence            44555555544432 2222211  1123345667788999999999984458999999999999999886321100    


Q ss_pred             CCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                      ++++|++++++|++.    ...++..|++++.+|+++++.+|+++++++++++|+++++++++||||.+.|+++|.++|+
T Consensus       107 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~  186 (403)
T TIGR01979       107 AGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAH  186 (403)
T ss_pred             CCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHH
Confidence            134599999998873    4566778999999999888889999999999999999999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC----
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP----  375 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~----  375 (435)
                      +||+++|+|++|+.+..           ++++...++|++++|+||+ +||.|+|++++++ ++.+........|.    
T Consensus       187 ~~~~~~ivD~a~~~g~~-----------~~~~~~~~~d~~~~s~~K~-~gp~G~g~l~~~~-~~~~~~~~~~~g~~~~~~  253 (403)
T TIGR01979       187 QVGAKVLVDGAQAVPHM-----------PVDVQALDCDFYVFSGHKM-YGPTGIGVLYGKE-ELLEQMPPFLGGGEMIAE  253 (403)
T ss_pred             HcCCEEEEEchhhcCcc-----------ccCccccCCCEEEEecccc-cCCCCceEEEEch-HHHhcCCCeecCCCceee
Confidence            99999999999864432           5666667899999999997 6899999976654 44332111100000    


Q ss_pred             ----CCCCC---CCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210        376 ----GGNYG---SPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYLP  434 (435)
Q Consensus       376 ----gg~~~---~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p  434 (435)
                          ...|.   ..-..|+.+...+++++++++.+   |.+.+.+++.++.+.+.+.++.++++..+.|
T Consensus       254 ~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~  322 (403)
T TIGR01979       254 VSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGP  322 (403)
T ss_pred             cccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence                00010   00113566666666777776554   5566777777777777777777777766543

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.94  E-value=1.3e-24  Score=221.50  Aligned_cols=266  Identities=20%  Similarity=0.250  Sum_probs=192.6

Q ss_pred             hhchhhHHHHHHHHHHHH----HHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCC-CCCCccc-ccccC
Q psy10210         70 RKIPAVRKKLEEETGKVA----KLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYD-WKHGRVS-GAVYY  143 (435)
Q Consensus        70 ~~lp~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~~  143 (435)
                      .++|.....+.++++.+.    +++.+.++... .......+|+. .+..++++++.+....+... +.....+ |....
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~lp~~-~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~   80 (447)
T PRK00451          3 PYIPHTEEDIREMLDAIGVKSIDELFADIPEEL-RLKRPLDLPPG-LSEMELLRHLRELAAKNKTAEEYPSFLGAGAYDH   80 (447)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCHHHHHHhCCHHH-HhCCCCCCCCC-CCHHHHHHHHHHHHhcCCCcCcCcccCcccccCC
Confidence            578887777888887554    45554444322 22334578986 59999999999887543211 1111222 22222


Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKG  222 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g  222 (435)
                      +.|.....+...-......++++++.+++.++.+.+.++++++++|.+.+ ++.+|+|||+++..++.++. .+++    
T Consensus        81 ~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~-~v~~~~g~t~~~~~~~~a~~~~~g~----  155 (447)
T PRK00451         81 YIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVA-NASMYDGATALAEAALMAVRITKRK----  155 (447)
T ss_pred             cCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcc-eEEecCcHHHHHHHHHHHHHhcCCC----
Confidence            34444444432222222346778888999999999999999999999876 89999999999988888774 3444    


Q ss_pred             CCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                          +|+++++.|+++..+++.    .|++++.+|++++ .+|+++++++++++|++|++++| |+||.++|+++|.++|
T Consensus       156 ----~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a  229 (447)
T PRK00451        156 ----KVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIA  229 (447)
T ss_pred             ----EEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHH
Confidence                499999999998887665    6999999999877 89999999999999999999999 8899999999999999


Q ss_pred             HHcCCcEEE--eccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCC
Q psy10210        299 EKYGIPVHV--DCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDL  361 (435)
Q Consensus       299 ~~~~~~liv--D~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~  361 (435)
                      +++|+++++  |.+..+..             ......++|+++.++|||+    +++.|+|+++++++
T Consensus       230 ~~~~~~~iv~~d~~~~g~~-------------~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~  285 (447)
T PRK00451        230 HAGGALFIVGVDPVSLGLL-------------KPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK  285 (447)
T ss_pred             HHCCCEEEEEcChHHhccC-------------CCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH
Confidence            999999998  54432111             1123568999999999972    33347888666553

>PRK14012 cysteine desulfurase; Provisional

Probab=99.93  E-value=4.6e-24  Score=214.66  Aligned_cols=235  Identities=21%  Similarity=0.226  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH---cCCEEEE
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY---FGMKVKH  251 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~---~g~~v~~  251 (435)
                      +...++++.+++++|.+++ ++++|+|+|+++.+++.++......    ++++|++++++|+++...++.   .|++++.
T Consensus        49 ~~~~~~r~~ia~~~g~~~~-~v~~~~g~t~al~~~l~~l~~~~~~----~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~  123 (404)
T PRK14012         49 EAVDIARNQIADLIGADPR-EIVFTSGATESDNLAIKGAAHFYQK----KGKHIITSKTEHKAVLDTCRQLEREGFEVTY  123 (404)
T ss_pred             HHHHHHHHHHHHHcCcCcC-eEEEeCCHHHHHHHHHHHHHHhhcC----CCCEEEEecCccHHHHHHHHHHHhCCCEEEE
Confidence            4566788899999998765 7999999999999999887521100    134599999999987665544   5999999


Q ss_pred             EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      +++++++.+|++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+..           +++.
T Consensus       124 v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~-----------~~~~  192 (404)
T PRK14012        124 LDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV-----------PIDL  192 (404)
T ss_pred             EccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc-----------ccCc
Confidence            99988888999999999999999999999999999999999999999999999999999864332           4566


Q ss_pred             CCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHH
Q psy10210        332 SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQV  409 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~  409 (435)
                      ...++|++++|+||+ ++|.|+|+++++++...+    ..+.+.|+........|+.+...+.+.-+++...  +.+...
T Consensus       193 ~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~~~~----~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~  267 (404)
T PRK14012        193 SKLKVDLMSFSAHKI-YGPKGIGALYVRRKPRVR----LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATEN  267 (404)
T ss_pred             ccCCCCEEEEehhhc-cCCCceEEEEEecCCCCC----CCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHH
Confidence            666899999999996 688899998888765432    2333344321111112333333333333343322  334445


Q ss_pred             HHHHHHHHHHHHHHHhcCCcc
Q psy10210        410 WICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       410 ~~~~~~~~~~~~~~~~l~~l~  430 (435)
                      ++.+++.+.+.+.++.++++.
T Consensus       268 ~~~~~l~~~l~~~L~~~~~i~  288 (404)
T PRK14012        268 ERIRALRDRLWNGIKDIEEVY  288 (404)
T ss_pred             HHHHHHHHHHHHHHhcCCCEE
Confidence            555666666666666655544

>PRK02948 cysteine desulfurase; Provisional

Probab=99.93  E-value=6.2e-24  Score=212.20  Aligned_cols=258  Identities=23%  Similarity=0.232  Sum_probs=182.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+.+.+++.+.+... +.|+... .......++..++++.+++++|.+++ ++++|+|+|+++.+++.++......    
T Consensus        13 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~~g~t~a~~~~~~~~~~~~~~----   86 (381)
T PRK02948         13 SKEALQTYQKAASQY-FGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFTSGGTESNYLAIQSLLNALPQ----   86 (381)
T ss_pred             CHHHHHHHHHHHHhc-CCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHHHHhccC----
Confidence            456666766666542 2333221 12244567788899999999998765 8999999999999999888643111    


Q ss_pred             CCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                      ++++|+++..+|+++...   ++..|++++.+|+++++.+|++++++++++++++|++++++||||.+.|+++|.++|++
T Consensus        87 ~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~  166 (381)
T PRK02948         87 NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKK  166 (381)
T ss_pred             CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHH
Confidence            134599999899886554   45569999999998888899999999998899999999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      +|+++|+|++++..           ..+++....++|+++.++||+ +||.|+|+++++++....      +...++...
T Consensus       167 ~~~~vivD~~~~~g-----------~~~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~------~~~~~~~~~  228 (381)
T PRK02948        167 YNVLFHSDCVQTFG-----------KLPIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQVRWK------PVFPGTTHE  228 (381)
T ss_pred             cCCEEEEEChhhcc-----------ccccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCCCCCC------CcccCCCCC
Confidence            99999999886422           235667777899999999997 789999997766542111      111111111


Q ss_pred             CCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        381 SPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .....++.+...++++.++++.+.  .+...+++++..+.+.+.++++
T Consensus       229 ~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~  276 (381)
T PRK02948        229 KGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL  276 (381)
T ss_pred             CCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            112334555556666666766542  2334455555555555555544

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.93  E-value=6.5e-24  Score=211.25  Aligned_cols=270  Identities=18%  Similarity=0.167  Sum_probs=197.9

Q ss_pred             hHhHHHHHHHHHHhhcCCCC--CCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNP--LHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      ++.+.+++.+.+..+. .|+  ...+......++..++++.+++++|+++++++++++|+|+++..++.++..+...   
T Consensus        12 p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~---   87 (371)
T PF00266_consen   12 PKSVLEAISDYLRNFY-ANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP---   87 (371)
T ss_dssp             BHHHHHHHHHHHHHSG-SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT---
T ss_pred             CHHHHHHHHHHHHHhh-hcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc---
Confidence            5567777777766542 334  2233456678888999999999999998558999999999999999999543221   


Q ss_pred             CCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                        +++|++.+..|++..    ..++..|++++.+|.+.++.+|++++++++++++++|++++.+|.+|...|+++|.++|
T Consensus        88 --g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~  165 (371)
T PF00266_consen   88 --GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLA  165 (371)
T ss_dssp             --TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHH
T ss_pred             --ccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhh
Confidence              345999999999965    44556799999999988889999999999999999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-  377 (435)
                      +++|+++++|++++.+.           .++|+...++|++++|+|| ++||.|+|+++++++... ........|... 
T Consensus       166 ~~~~~~~~vD~~~~~g~-----------~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~-~~~p~~~~~~~~~  232 (371)
T PF00266_consen  166 HEYGALLVVDAAQSAGC-----------VPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIE-RLRPAKPGGGYLD  232 (371)
T ss_dssp             HHTTSEEEEE-TTTTTT-----------SS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHH-HHHTSSSSSSTTT
T ss_pred             hccCCceeEechhcccc-----------ccccccccccceeeecccc-cCCCCchhhheehhhhhh-ccccccccccccc
Confidence            99999999999986443           3788989999999999999 689999999888875332 211111222100 


Q ss_pred             ----------CCCCCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        378 ----------NYGSPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       378 ----------~~~~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                                .....-..|+.+...+++...+++.+   |.+.+.++..++.+.+.+.+++++.+..+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~  301 (371)
T PF00266_consen  233 FPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLG  301 (371)
T ss_dssp             HHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred             cccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence                      00000113566666666666666665   455555666666666777777777766644

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.93  E-value=7.6e-24  Score=212.70  Aligned_cols=267  Identities=18%  Similarity=0.126  Sum_probs=182.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC-CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH-PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++.+.+++.+.+.... .++.. +.......++..++++.+++++|.+++ ++++++|+++++.+++.++.....     
T Consensus        30 p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-~v~~~~~~t~~l~~~~~~~~~~~~-----  102 (397)
T TIGR01976        30 PQSVADAVSAALTRSN-ANRGGAYESSRRADQVVDDAREAVADLLNADPP-EVVFGANATSLTFLLSRAISRRWG-----  102 (397)
T ss_pred             CHHHHHHHHHHHHhcC-CCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEeCCHHHHHHHHHHHHHhcCC-----
Confidence            3455555555554321 11111 111234556678888999999998766 799999999999888877632111     


Q ss_pred             CCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCC-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                      ++++|++++++|++..    ..++..|++++.+|+++ ++.+|++++++++++++++|++++|+||||.+.|+++|.++|
T Consensus       103 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~  182 (397)
T TIGR01976       103 PGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELV  182 (397)
T ss_pred             CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHH
Confidence            1235999999998743    55677899999999874 788999999999998999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      ++||+++++|++++..           ..++++...++|++++|+||| +||. +|+++.++ ++.+........|....
T Consensus       183 ~~~~~~~ivD~a~~~~-----------~~~~~~~~~~~d~~~~s~~K~-~g~~-~G~l~~~~-~~~~~l~~~~~~~~~~~  248 (397)
T TIGR01976       183 HAAGALVVVDAVHYAP-----------HGLIDVQATGADFLTCSAYKF-FGPH-MGILWGRP-ELLMNLPPYKLTFSYDT  248 (397)
T ss_pred             HHcCCEEEEehhhhcc-----------ccCCCHHHcCCCEEEEechhh-cCCc-eEEEEEcH-HHHhhCCCccccCccCC
Confidence            9999999999998432           125566667899999999999 4664 78866654 44333222223332221


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhcHH-----------------HHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFGFE-----------------AQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g~~-----------------g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ....-..|+++...+++..++++.+...                 ...++..+..+.+.+.+++++++..+
T Consensus       249 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~  319 (397)
T TIGR01976       249 GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLY  319 (397)
T ss_pred             CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            1111235677777777777777665332                 23344444455555555555555544

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.93  E-value=2.8e-23  Score=220.70  Aligned_cols=300  Identities=16%  Similarity=0.149  Sum_probs=226.4

Q ss_pred             CHHHHHHHHHHHHhCCCCCCCCCcccccccCC-hHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCC
Q psy10210        113 NRLEILELVSNYLARGHYDWKHGRVSGAVYYY-QQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      ++.++++.+.+..+++..- ..+..+.+.+.. .+...+.+......+....|++|+ ..++..+++.++.+|+++++|.
T Consensus       467 sE~e~~r~~~~L~~kn~~~-~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGm  545 (939)
T TIGR00461       467 SETEMLRYLHRLESKDLAL-NNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGF  545 (939)
T ss_pred             CHHHHHHHHHHHHhcCCCc-cccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCC
Confidence            7889999999887765321 124445445543 667777775555666667899998 7899999999999999999999


Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHh
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAI  269 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i  269 (435)
                      +.  ..+..++|+.+...++.++|.+.+. +|. .+.+|++|...|.+....++..|++++.||++++|.+|+++|++++
T Consensus       546 d~--~Sl~p~aGA~gE~agL~aiR~y~~~-rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i  622 (939)
T TIGR00461       546 DA--ISLQPNSGAQGEYAGLRVIRSYHES-RGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKA  622 (939)
T ss_pred             CC--cccCCchHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHH
Confidence            84  4577788888888888888776544 443 4677999999998888889999999999999989999999999999


Q ss_pred             hc---CceEEEEeCCCCCcccccC-HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCC
Q psy10210        270 TG---NTVMLVGSMPNFPYGTMDD-IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK  345 (435)
Q Consensus       270 ~~---~~~~v~~~~p~nptG~~~~-i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK  345 (435)
                      ++   ++++|++++|+| +|.+++ +++|.++|+++|.++++|.++.....          ...+....|+|++.+|.||
T Consensus       623 ~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~----------~l~~Pg~~GaDi~~~s~HK  691 (939)
T TIGR00461       623 EQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV----------GLTSPGDLGADVCHLNLHK  691 (939)
T ss_pred             hhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC----------CCCCccccCCCEEEecCCc
Confidence            74   899999999999 899966 99999999999999999999854211          1223356789999999999


Q ss_pred             CCC-----ccCCcEEEEEeCCcccccccc--c--cCCCCCCC--CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        346 YGF-----TPKGSSVVLYRDLKYKHCQYF--V--TSDWPGGN--YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       346 ~~~-----~p~g~g~il~~~~~~~~~~~~--~--~~~~~gg~--~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                      +++     ||+|+|++.++++ +......  .  ..+..+..  .+.-+-.+++.+..+..+|+.++.+|.+|+.+..+.
T Consensus       692 tf~~P~G~GGPg~G~i~vr~~-L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~  770 (939)
T TIGR00461       692 TFCIPHGGGGPGMGPIGVKSH-LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVV  770 (939)
T ss_pred             cCCCCCCCCCCCeEEEEEhhh-chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence            767     5566799888864 3222100  0  00111100  010111245555666789999999999999999999


Q ss_pred             HHHHHHHHHHhcCC
Q psy10210        415 YHFNYKSCLQNLSD  428 (435)
Q Consensus       415 ~~~~~~~~~~~l~~  428 (435)
                      ...++.++.++|.+
T Consensus       771 ailnAnYl~~rL~~  784 (939)
T TIGR00461       771 AILNANYMATRLKD  784 (939)
T ss_pred             HHHHHHHHHHHhhc
Confidence            88888888777754

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.93  E-value=2.9e-24  Score=212.52  Aligned_cols=238  Identities=13%  Similarity=0.078  Sum_probs=176.1

Q ss_pred             cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcC
Q psy10210        169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFG  246 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g  246 (435)
                      .++...++..++++.+++++|.+++..+++|+|||+++.+++.++..+++.        |++++++|++  +...++..|
T Consensus        26 ~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~--------vl~~~~~~~~~~~~~~~~~~g   97 (356)
T cd06451          26 RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDK--------VLVGVNGVFGDRWADMAERYG   97 (356)
T ss_pred             CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCE--------EEEecCCchhHHHHHHHHHhC
Confidence            355677888899999999999966556889999999999999998766665        9999988876  467788899


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      ++++.+|+++++.+|++++++.+++ ++++|++++++||+|.+.++++|.++|+++|+++++|++++.+.          
T Consensus        98 ~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~----------  167 (356)
T cd06451          98 ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGG----------  167 (356)
T ss_pred             CCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccC----------
Confidence            9999999987788999999999987 89999999999999999999999999999999999999975321          


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc--ccCCCCCC-----CC-C-CCccccCCCchHHHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF--VTSDWPGG-----NY-G-SPSVSGSRSGGIIATC  396 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~--~~~~~~gg-----~~-~-~~~~~gsr~~~~ia~~  396 (435)
                       .+++....++|+++.++||++++|.|+|+++.+++ +.+....  ....|...     .+ + .....++.+...++++
T Consensus       168 -~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~  245 (356)
T cd06451         168 -EPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYAL  245 (356)
T ss_pred             -ccccccccCccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHH
Confidence             24455556789999999999888999999777654 4332211  01111100     00 0 0122334444445666


Q ss_pred             HHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        397 WAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       397 ~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .++++.+..+++.+..++..+..+.+.+.|
T Consensus       246 ~aal~~l~~~~~~~~~~~~~~~~~~l~~~L  275 (356)
T cd06451         246 REALDLILEEGLENRWARHRRLAKALREGL  275 (356)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            777777766666555555555544444444

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.92  E-value=1.1e-23  Score=211.35  Aligned_cols=243  Identities=16%  Similarity=0.074  Sum_probs=179.3

Q ss_pred             cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcC
Q psy10210        169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFG  246 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g  246 (435)
                      ..+.+.++..++++.+++++|.+++..++++++||+++..++.++.+++++        |+++++.|++.  ...++..|
T Consensus        36 ~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~--------Vlv~~~~~~~~~~~~~~~~~g  107 (401)
T PLN02409         36 RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDK--------VVSFRIGQFSLLWIDQMQRLN  107 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCE--------EEEeCCCchhHHHHHHHHHcC
Confidence            367788889999999999999976667899999999999999887777766        99999999774  57788889


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHH--HHHcCCcEEEeccccchhhhccc
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKL--GEKYGIPVHVDCCLGGFLAPFMS  320 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~l--a~~~~~~livD~~~~~~~~~~~~  320 (435)
                      ++++.++.+.++.+|++++++++++    ++++|++++++||||.+.|+++|.++  |+++|+++++|++++.+      
T Consensus       108 ~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g------  181 (401)
T PLN02409        108 FDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIG------  181 (401)
T ss_pred             CceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccC------
Confidence            9999999886556899999999985    78999999999999999999999999  99999999999998532      


Q ss_pred             ccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc-----ccCCCCCC--CCCCC-ccccCCCchH
Q psy10210        321 AAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF-----VTSDWPGG--NYGSP-SVSGSRSGGI  392 (435)
Q Consensus       321 ~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~-----~~~~~~gg--~~~~~-~~~gsr~~~~  392 (435)
                           ..++++...++|+++.++|||+++|.|+|+++++++.+ +....     ...+|...  .+... ...++.+...
T Consensus       182 -----~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~  255 (401)
T PLN02409        182 -----ALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKAL-EASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQL  255 (401)
T ss_pred             -----CccccccccCccEEEEcCccccCcCCCcceeEECHHHH-HHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHH
Confidence                 23778878899999999999988999999977665432 22110     11111000  00000 0122444444


Q ss_pred             HHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        393 IATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       393 ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      +.++.++++.+   |.+...++.+++.+.+.+.++.+ +++.+
T Consensus       256 ~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~  297 (401)
T PLN02409        256 LYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC  297 (401)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence            55666666655   44555555555555566555554 44443

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.91  E-value=1.2e-22  Score=203.20  Aligned_cols=168  Identities=20%  Similarity=0.200  Sum_probs=144.2

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ....++++.+++++|.+   .+++|+|+++++.+++.++..+++.        |+++.++|.+...+++..|++++.+|+
T Consensus        63 ~~~~~l~~~lA~~~g~~---~~~~~~g~t~a~~~al~~l~~~gd~--------Vlv~~~~h~s~~~~~~~~G~~~~~v~~  131 (387)
T PRK09331         63 PPIADFHEDLAEFLGMD---EARVTHGAREGKFAVMHSLCKKGDY--------VVLDGLAHYTSYVAAERAGLNVREVPK  131 (387)
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhcCCCCE--------EEECCCchHHHHHHHHHcCCEEEEEeC
Confidence            34667778888889874   4688999999999999999777666        999999999998889999999999998


Q ss_pred             --CCCccccHHHHHHHhhc-------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        255 --TSSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       255 --~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                        ++++.+|++++++++++       ++++|++++|+|++|.+.++++|.++|++||+++|+|++|+.+..         
T Consensus       132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~---------  202 (387)
T PRK09331        132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM---------  202 (387)
T ss_pred             ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc---------
Confidence              66788999999999863       689999999999999999999999999999999999999975433         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                        +++....|+|+++.|+||++.+|.|+|++++++ ++.+
T Consensus       203 --~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~  239 (387)
T PRK09331        203 --PVDGKKLGADFIVGSGHKSMAASAPSGVLATTE-EYAD  239 (387)
T ss_pred             --CCCHHHcCCCEEEeeCcccccCCCCEEEEEECH-HHHh
Confidence              556666789999999999988888999866654 4433

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.91  E-value=7.9e-23  Score=202.71  Aligned_cols=167  Identities=17%  Similarity=0.159  Sum_probs=140.4

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ...++++.+++++|.   +++++|+|+++++.+++.++..+++.        |+++.++|.+...+++..|++++.+|++
T Consensus        45 ~~~~l~~~la~~~g~---~~i~~~~g~t~al~~~l~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~  113 (361)
T cd06452          45 PIKDFHHDLAEFLGM---DEARVTPGAREGKFAVMHSLCEKGDW--------VVVDGLAHYTSYVAAERAGLNVREVPNT  113 (361)
T ss_pred             hHHHHHHHHHHHcCC---ceEEEeCCHHHHHHHHHHHhcCCCCE--------EEEcCCcchHHHHHHHhcCCEEEEEecC
Confidence            345666788888887   37899999999999999998777766        9999999999888899999999999997


Q ss_pred             CC--ccccHHHHHHHhh-------cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        256 SS--YTVDLAALQSAIT-------GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       256 ~~--~~~d~~~l~~~i~-------~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      .+  +.+|+++++++++       +++++|++++|+||+|.+.++++|.++|+++|+++|+|++|+.+..          
T Consensus       114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~----------  183 (361)
T cd06452         114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM----------  183 (361)
T ss_pred             CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc----------
Confidence            54  4899999999886       3789999999999999999999999999999999999999974322          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                       +++....++|+++.|+||++++|.++|+++.+ +++.+
T Consensus       184 -~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~-~~~~~  220 (361)
T cd06452         184 -PVSGKELGADFIVGSGHKSMAASAPIGVLATT-EEWAD  220 (361)
T ss_pred             -CCCHHHcCCCEEEecCCccccCCCCeEEEEEC-HHHHH
Confidence             34444557899999999997777888986665 44443

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.91  E-value=2.7e-22  Score=215.85  Aligned_cols=292  Identities=14%  Similarity=0.095  Sum_probs=216.2

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCccccc--ccCChHhHHHHHHHHHHhhcCCCCCCCCc-ChhHHHHHHHHHHHHHHHh
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGA--VYYYQQDLVDLLTEVFGLTSYTNPLHPDI-FPGVCKMEAEVIKMCARMF  188 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~l~  188 (435)
                      .++.++++.+.+..+++-.- ..+...-+  ...-+|........+ ..+...+|+.|.. .++..++..++++++++++
T Consensus       504 ~se~~~~r~~~~l~~~~~~~-~~~~~plgsctmk~n~~~~~~~~~~-~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~  581 (993)
T PLN02414        504 HSEHELLRYLHRLQNKDLSL-VHSMIPLGSCTMKLNATTEMMPVTW-PEFANIHPFAPVDQAQGYQEMFEDLGDLLCEIT  581 (993)
T ss_pred             cCHHHHHHHHHHHhhccccc-ccCCccCcccccccCchhhhhhhcC-cchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            56788999888877664221 12222211  111256555555443 4455667887755 4899999999999999999


Q ss_pred             CCCCCCceEEcCChH----HHHHHHHHHHHHH-hhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHH
Q psy10210        189 NGGPETCGCMTSGGT----ESIMMACKAYRDY-AREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLA  263 (435)
Q Consensus       189 g~~~~~~~~~t~ggt----eai~~a~~a~~~~-~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~  263 (435)
                      |.   +.+.++++++    +++.++++++.+. |+.    .+.+|+++..+|.+....+...|++++.+|++++|.+|++
T Consensus       582 g~---~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~----~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle  654 (993)
T PLN02414        582 GF---DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDH----HRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIE  654 (993)
T ss_pred             CC---CeEEEcCCCcHHHHHHHHHHHHHHHhccCCC----CCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHH
Confidence            99   3799999998    9999999999654 432    3557999999999999999999999999999989999999


Q ss_pred             HHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        264 ALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       264 ~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      +|++++++   ++++|++++|+|-+|..+++++|.++|+++|+.+++|+++.....          ...+....|+|++.
T Consensus       655 ~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~----------~l~~p~~~GaD~~~  724 (993)
T PLN02414        655 ELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV----------GLTSPGFIGADVCH  724 (993)
T ss_pred             HHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc----------CcCCccccCCCEEE
Confidence            99999984   789999999999999999999999999999999999999854321          13344567899999


Q ss_pred             ecCCCCCCccC-----CcEEEEEeCCccccccccccCCCCCCCCC------CCccccCCCc------hHHHHHHHHHHHh
Q psy10210        341 VDTHKYGFTPK-----GSSVVLYRDLKYKHCQYFVTSDWPGGNYG------SPSVSGSRSG------GIIATCWAAMMYF  403 (435)
Q Consensus       341 ~s~hK~~~~p~-----g~g~il~~~~~~~~~~~~~~~~~~gg~~~------~~~~~gsr~~------~~ia~~~a~l~~~  403 (435)
                      ++.||++++|.     |+|++.+++ .+...    .|.|.-+..+      ...-.|+++.      ..+..+|+.++.+
T Consensus       725 ~s~HK~f~~P~G~GGPg~G~l~~~~-~L~p~----lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l  799 (993)
T PLN02414        725 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPF----LPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM  799 (993)
T ss_pred             ecCCccCCcCcccCCCCeeeEEEch-hhccc----CCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH
Confidence            99999766554     589976665 44332    3444311100      1111355443      4455788889999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      |.+|+++..+....++.++.++|.
T Consensus       800 G~~Gl~~~a~~a~~nAnYl~~rL~  823 (993)
T PLN02414        800 GSEGLTDASKIAILNANYMAKRLE  823 (993)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHH
Confidence            999998877777777666666653

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.91  E-value=1.2e-22  Score=203.68  Aligned_cols=215  Identities=22%  Similarity=0.200  Sum_probs=163.0

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|..++ ++.+.+.+.+.....       ..+|.+..|.+++++++++++......+                 
T Consensus        36 i~l~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-----------------   90 (391)
T PRK08361         36 ISLGIGEPDFDT-PKNIKEAAKRALDEG-------WTHYTPNAGIPELREAIAEYYKKFYGVD-----------------   90 (391)
T ss_pred             EEcCCCCCCCCC-CHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence            445556666544 567777777765532       2345566789999999999887542211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++ +++++|+|+++++.+++.++.++++.        |++++|+|.++...+...|++++.+|+++  ++
T Consensus        91 ---------~~~-~~i~~t~G~~~al~~~~~~l~~~g~~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  152 (391)
T PRK08361         91 ---------VDV-DNVIVTAGAYEATYLAFESLLEEGDE--------VIIPDPAFVCYVEDAKIAEAKPIRIPLREENEF  152 (391)
T ss_pred             ---------CCc-ccEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCCCcccHHHHHHcCCEEEEEecCCccCC
Confidence                     133 38999999999999999998877766        99999999999999999999999999974  46


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|++++++.++++++++++++|+||||.+-+   +++|.++|+++++++|+|++|+.+...     +....+.......
T Consensus       153 ~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~  227 (391)
T PRK08361        153 QPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYE-----GAKHYPMIKYAPD  227 (391)
T ss_pred             CCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeC-----CCCCCCHhhcCCC
Confidence            79999999999989999999999999999965   899999999999999999999887642     1111111111223


Q ss_pred             ccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      .++++.|++|. ++..|  +|+++.. +++.+
T Consensus       228 ~~i~~~s~SK~-~~~~GlRiG~~~~~-~~~~~  257 (391)
T PRK08361        228 NTILANSFSKT-FAMTGWRLGFVIAP-EQVIK  257 (391)
T ss_pred             CEEEEecCchh-cCCcHhhhhhhccC-HHHHH
Confidence            57888999998 45445  8996664 44443

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.91  E-value=8.1e-22  Score=213.10  Aligned_cols=296  Identities=16%  Similarity=0.133  Sum_probs=209.8

Q ss_pred             CHHHHHHHHHHHHhCCCCCCCCCcccccccC-ChHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCC
Q psy10210        113 NRLEILELVSNYLARGHYDWKHGRVSGAVYY-YQQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      ++.++++.+.+..+++......-..-|+.+. -+|.....+..+ ..+....|++| +.+++..+++.++.+|+++++|.
T Consensus       479 sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~-~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~  557 (954)
T PRK05367        479 SETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITW-PEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY  557 (954)
T ss_pred             CHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhC-ccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999999988775332211122233333 255555555543 33444578998 88999999999999999999998


Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHh
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAI  269 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i  269 (435)
                      +.  ..+..+||+.+...++.+++..... +|. ++++|++++..|.+....+...|++++.+|++.+|.+|+++|++++
T Consensus       558 d~--~sl~~~~ga~ge~agL~a~r~~~~~-~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i  634 (954)
T PRK05367        558 DA--VSLQPNAGAQGEYAGLLAIRAYHES-RGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKA  634 (954)
T ss_pred             CC--EEECccHHHHHHHHHHHHHHHHhhc-cCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHH
Confidence            63  2344557788887877777654332 343 3567999999999999999999999999999988999999999999


Q ss_pred             hc---CceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCC
Q psy10210        270 TG---NTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK  345 (435)
Q Consensus       270 ~~---~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK  345 (435)
                      ++   ++.+|++++|++- |.+ +|+++|+++|+++|+++|+|+++......+          ......|+|++++|+||
T Consensus       635 ~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l----------~~pg~~GADi~~~s~HK  703 (954)
T PRK05367        635 EEHADNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGL----------ARPGDIGADVSHLNLHK  703 (954)
T ss_pred             hccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCC----------CChhhcCCCEEEecCcc
Confidence            65   4788999999985 665 899999999999999999999996544321          12235689999999999


Q ss_pred             CCCccC-----CcEEEEEeCCccccccccccCCCCCCC-C---CCCccccCCC--chHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        346 YGFTPK-----GSSVVLYRDLKYKHCQYFVTSDWPGGN-Y---GSPSVSGSRS--GGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       346 ~~~~p~-----g~g~il~~~~~~~~~~~~~~~~~~gg~-~---~~~~~~gsr~--~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                      |++.|.     |+|.+.+++ .+...    .+.+..+. .   +...+..+.-  +..+..+|+.++.+|.+|+++.++.
T Consensus       704 ~f~~P~G~GGPg~G~l~vr~-~l~p~----lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~  778 (954)
T PRK05367        704 TFCIPHGGGGPGVGPIGVKA-HLAPF----LPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEV  778 (954)
T ss_pred             cCCCCcCCCCCceEEEeecc-ccccc----CCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence            975554     466877774 33221    23332110 0   0111111111  1233458999999999999999997


Q ss_pred             HHHHHHHHHHhcCC
Q psy10210        415 YHFNYKSCLQNLSD  428 (435)
Q Consensus       415 ~~~~~~~~~~~l~~  428 (435)
                      ...++.++.++|.+
T Consensus       779 ~~~~A~Yl~~~L~~  792 (954)
T PRK05367        779 AILNANYIAKRLKD  792 (954)
T ss_pred             HHHHHHHHHHHHHh
Confidence            77777776666643

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.90  E-value=2.1e-22  Score=201.29  Aligned_cols=218  Identities=15%  Similarity=0.145  Sum_probs=162.3

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|..+. ++.+.+.+.+.+...      ....|..+.|.+++++++++++.+.....                 
T Consensus        32 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~-----------------   87 (383)
T TIGR03540        32 ISLGIGDPDLPT-PKHIVEALCKAAENP------ENHRYPSYEGMLAYRQAVADWYKRRFGVE-----------------   87 (383)
T ss_pred             EEeCCCCCCCCC-CHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHhhCCC-----------------
Confidence            455566676533 567788887766532      12346667789999999999987642221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C-Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S-SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~-~~  258 (435)
                               .+++.++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++ + ++
T Consensus        88 ---------~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~  150 (383)
T TIGR03540        88 ---------LDPETEVLSLIGSKEGIAHIPLAFVNPGDI--------VLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGF  150 (383)
T ss_pred             ---------CCCCCeEEECCCcHHHHHHHHHHhCCCCCE--------EEEeCCCCcchHHHHHhcCCEEEEEecCcccCC
Confidence                     123336899999999999999999877776        9999999999999999999999999997 3 45


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~  333 (435)
                      .+|++++++++.+++++|++++||||||.+   +.+++|+++|++||+++++|++|+.+.+.     +...+++ .+. .
T Consensus       151 ~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~-----~~~~~~~~~~~~~  225 (383)
T TIGR03540       151 LPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFD-----GYKAPSFLEVDGA  225 (383)
T ss_pred             ccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccC-----CCCCcCcccCCCc
Confidence            679999999988899999999999999999   45899999999999999999999877541     1111111 111 1


Q ss_pred             CCccEEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGFTP--KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p--~g~g~il~~~~~~~~~  366 (435)
                      ....+...|+.|.. +.  ..+|+++ .++++.+.
T Consensus       226 ~~~~i~~~SfSK~~-g~~GlRiG~~i-~~~~l~~~  258 (383)
T TIGR03540       226 KDVGIEFHSLSKTY-NMTGWRIGMAV-GNADLIAG  258 (383)
T ss_pred             ccCEEEEEeccccc-CCccceeeEEe-CCHHHHHH
Confidence            12346667888984 44  4489964 55565543

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.90  E-value=9.3e-23  Score=202.37  Aligned_cols=195  Identities=13%  Similarity=0.063  Sum_probs=153.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      |+-.+.+.+.+++.... .   +  ..+...+...++++.+++++|++++ +++++|+|||+++..++.++..+++.   
T Consensus        10 gp~~~~~~v~~~~~~~~-~---~--~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~---   80 (363)
T TIGR02326        10 GPLTTSRTVKEAMLFDW-C---T--WDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGK---   80 (363)
T ss_pred             CCCCCCHHHHHHhCCCC-C---C--CChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCe---
Confidence            44445555555544321 1   1  1245677788899999999999764 47999999999999999998655544   


Q ss_pred             CCCCeEEEe-CCCchh-HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLP-TTAHPA-FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~-~~~~~~-~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                           +++. ...|.. +...++..|++++.+|+++++.+|++++++++++  +++++.+++++||||.+.|+++|.++|
T Consensus        81 -----vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~  155 (363)
T TIGR02326        81 -----LLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLA  155 (363)
T ss_pred             -----EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHH
Confidence                 5554 445554 3577888999999999988888999999999875  457788999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                      ++||+++++|++++.+           ..++++...++|+++.++|||+++|.|+|+++++++.+
T Consensus       156 ~~~g~~livD~~~~~g-----------~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~  209 (363)
T TIGR02326       156 HRHGKVTIVDAMSSFG-----------GIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAEL  209 (363)
T ss_pred             HHcCCEEEEEcccccc-----------CcccchhhcCccEEEecCccccccCCcceEEEECHHHH
Confidence            9999999999987532           23677777789999999999988999999988776543

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PLN00175 aminotransferase family protein; Provisional

Probab=99.90  E-value=2e-22  Score=203.06  Aligned_cols=218  Identities=17%  Similarity=0.131  Sum_probs=167.1

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+.+ +++.+.+.+.+.+..+       ...|....|.+++++++++++......+                
T Consensus        56 ~i~l~~G~P~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~Lr~aia~~~~~~~g~~----------------  111 (413)
T PLN00175         56 AINLGQGFPNFD-GPDFVKEAAIQAIRDG-------KNQYARGFGVPELNSAIAERFKKDTGLV----------------  111 (413)
T ss_pred             eEecCCCCCCCC-CCHHHHHHHHHHHhcC-------CCCcCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence            466777888863 4567788887776542       2346677799999999999987643221                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY  258 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~  258 (435)
                                .+++.++++|+|+++++.+++.++.++++.        |++++|.|+.+...++..|++++.+|++ +++
T Consensus       112 ----------~~~~~~I~vt~G~~~al~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  173 (413)
T PLN00175        112 ----------VDPEKEVTVTSGCTEAIAATILGLINPGDE--------VILFAPFYDSYEATLSMAGAKIKTVTLRPPDF  173 (413)
T ss_pred             ----------CCCCCCEEEeCCHHHHHHHHHHHhCCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEEECCcccC
Confidence                      133336999999999999999998887776        9999999999999999999999999997 467


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LP  334 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~  334 (435)
                      .+|++++++++.+++++|++++|+||||.+   +++++|.++|++|++++|+|++|..+.+.  +. ..  ....+. ..
T Consensus       174 ~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~--~~-~~--s~~~~~~~~  248 (413)
T PLN00175        174 AVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFE--GD-HI--SMASLPGMY  248 (413)
T ss_pred             CCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccC--Cc-cc--ChhhCCCCc
Confidence            899999999998899999999999999999   57889999999999999999999887642  10 11  111111 12


Q ss_pred             CccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      +..+++.|+.|... ....+|+++. ++++..
T Consensus       249 ~~vi~i~SfSK~~~~~G~RiG~~v~-~~~l~~  279 (413)
T PLN00175        249 ERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTW  279 (413)
T ss_pred             CcEEEEecchhhccCcchheeeeEe-CHHHHH
Confidence            34567778999853 3466899665 444443

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.90  E-value=5.3e-22  Score=199.38  Aligned_cols=237  Identities=20%  Similarity=0.196  Sum_probs=160.6

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHH-HHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKA-YRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG  246 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a-~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g  246 (435)
                      ..+.+..++..++++++++++|.+.+ +++++++|+++...++.+ ...++      ++++|+++++.|+++..++...|
T Consensus        57 ~~~~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~~~~~~~~~~~~~~------~gd~Vl~~~~~h~~~~~~~~~~~  129 (398)
T cd00613          57 EISQGRLQALFELQTMLCELTGMDVA-NASLQDEATAAAEAAGLAAIRAYH------KRNKVLVPDSAHPTNPAVARTRG  129 (398)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHHHHHHHHHHHhccc------CCCEEEEcCccCcchHHHHHHhc
Confidence            33567778888899999999988654 566676555554544444 34431      13459999999999988888877


Q ss_pred             ----CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC-HHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210        247 ----MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD-IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA  321 (435)
Q Consensus       247 ----~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~-i~~i~~la~~~~~~livD~~~~~~~~~~~~~  321 (435)
                          ++++.+|+++++.+|+++++++++++|++|++++|+ |+|.+.+ +++|.++|++||+++|+|++++.+..     
T Consensus       130 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~-----  203 (398)
T cd00613         130 EPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTG-----  203 (398)
T ss_pred             ccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccC-----
Confidence                999999987777899999999999999999999986 8999977 59999999999999999998864322     


Q ss_pred             cCCCCCCCCCCCCCccEEEecCCCCCCcc-----CCcEEEEEeCCccccccccccCCCCCCC------------------
Q psy10210        322 AGYPLPPFDFSLPGVTSISVDTHKYGFTP-----KGSSVVLYRDLKYKHCQYFVTSDWPGGN------------------  378 (435)
Q Consensus       322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-----~g~g~il~~~~~~~~~~~~~~~~~~gg~------------------  378 (435)
                            +.+....++|+++.|+|||+ +|     .++|+++.+ +++.+........|....                  
T Consensus       204 ------~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  275 (398)
T cd00613         204 ------LKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK-KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIR  275 (398)
T ss_pred             ------CCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh-hhhHhhCCCCeeccccccCCCcceEEecccchhhcc
Confidence                  22333457999999999996 55     456775554 444432111111111100                  


Q ss_pred             --CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        379 --YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       379 --~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                        .++.++ .+.+....+.++++++.++.+++.+..++..+....+.++|
T Consensus       276 ~e~~~~~~-~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L  324 (398)
T cd00613         276 REKATSNI-CTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRL  324 (398)
T ss_pred             cccccccc-eecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence              011111 12233344567778888888887755554444444443333

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.90  E-value=2.1e-22  Score=208.51  Aligned_cols=212  Identities=16%  Similarity=0.132  Sum_probs=160.9

Q ss_pred             CCccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210        100 GLEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME  177 (435)
Q Consensus       100 ~~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e  177 (435)
                      .+.+..+.|.  ...+|+++++.+.+.+..        ..+|....|.+++|+++++++...... .             
T Consensus       148 ~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--------~~~Y~~~~G~~~lReaia~~~~~~~~~-~-------------  205 (517)
T PRK13355        148 ILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--------TEGYSDSKGLFSARKAIMQYAQLKGLP-N-------------  205 (517)
T ss_pred             eEEecCcCCCcCCCCCCHHHHHHHHHHhhc--------CCCCCCCcChHHHHHHHHHHHHhcCCC-C-------------
Confidence            3555666664  224577888888776542        124667779999999999998664211 1             


Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--  255 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--  255 (435)
                                  .++ ++|++|+|+++++.+++.++.+++|.        |++++|+|+.+...++..|++++.++++  
T Consensus       206 ------------~~~-~~I~it~G~~eal~~~~~~l~~~Gd~--------Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~  264 (517)
T PRK13355        206 ------------VDV-DDIYTGNGVSELINLSMSALLDDGDE--------VLIPSPDYPLWTACVNLAGGTAVHYRCDEQ  264 (517)
T ss_pred             ------------CCh-hHEEEeCcHHHHHHHHHHHhCCCCCE--------EEEcCCCCcCHHHHHHHCCCEEEEeecCcc
Confidence                        123 38999999999999999999888877        9999999999999999999999999987  


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      .++.+|++++++++++++++|++++||||||.+   +.+++|+++|++||++||+||+|..+.+.     +..+.++...
T Consensus       265 ~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~-----~~~~~s~~~~  339 (517)
T PRK13355        265 SEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMD-----GLEHTSIASL  339 (517)
T ss_pred             cCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCC-----CCCcccHHHh
Confidence            357899999999999999999999999999999   45899999999999999999999987642     1111111111


Q ss_pred             CCCccEE-EecCCCC-CCccCCcEEEEEe
Q psy10210        333 LPGVTSI-SVDTHKY-GFTPKGSSVVLYR  359 (435)
Q Consensus       333 ~~gvd~~-~~s~hK~-~~~p~g~g~il~~  359 (435)
                      .+.+.++ ..|++|. +.+...+|+++..
T Consensus       340 ~~~~~vi~~~S~SK~~~~~G~RiG~~i~~  368 (517)
T PRK13355        340 APDLFCVTFSGLSKSHMIAGYRIGWMILS  368 (517)
T ss_pred             CCCCeEEEEecchhhccCcccceEEEEee
Confidence            1233233 3578897 3455668997764

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.90  E-value=4.7e-22  Score=200.00  Aligned_cols=220  Identities=19%  Similarity=0.196  Sum_probs=165.9

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|....++..+.+.+.+.+...      +..+|....|.+++++++++++.......                 
T Consensus        42 i~l~~g~~~~~~p~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~LR~aia~~l~~~~g~~-----------------   98 (405)
T PRK06207         42 VDFSHGDVDAHEPTPGAFELFSAGVERG------GVQAYTEYRGDADIRELLAARLAAFTGAP-----------------   98 (405)
T ss_pred             eecCCcCCCCCCCCHHHHHHHHHHHhcC------CCccCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            4566667764345567788887766532      23456667789999999999887653221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-----
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-----  255 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-----  255 (435)
                               .++++++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++     
T Consensus        99 ---------~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~--------Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~  161 (405)
T PRK06207         99 ---------VDAADELIITPGTQGALFLAVAATVARGDK--------VAIVQPDYFANRKLVEFFEGEMVPVQLDYLSAD  161 (405)
T ss_pred             ---------CCCCCCEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEEeccccCcc
Confidence                     123248999999999999999999888877        9999999999999999999999999985     


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF  331 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~  331 (435)
                      .++.+|+++++++++++++++++++||||||.+   +++++|+++|++||+++++|++|+.+.+.     +...+++ .+
T Consensus       162 ~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~-----~~~~~~~~~~  236 (405)
T PRK06207        162 KRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD-----GTSYTHLRAL  236 (405)
T ss_pred             cCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-----CCCCCchhcC
Confidence            257899999999998889999999999999999   46889999999999999999999987642     1111111 11


Q ss_pred             C-CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        332 S-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       332 ~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      . ...-.+++.|++|... +...+|+++ .++++.+.
T Consensus       237 ~~~~~~vi~i~SfSK~~~lpGlRiG~ii-~~~~l~~~  272 (405)
T PRK06207        237 PIDPENVITIMGPSKTESLSGYRLGVAF-GSPAIIDR  272 (405)
T ss_pred             CCCcCcEEEEecchhhccCcccceEEEE-cCHHHHHH
Confidence            1 1223467778999843 335589965 45555443

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.90  E-value=3.8e-22  Score=199.58  Aligned_cols=218  Identities=15%  Similarity=0.180  Sum_probs=161.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|.. .+++.+.+.+.+.+...      ....|....|.+++++++++++......+                 
T Consensus        34 i~l~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-----------------   89 (385)
T PRK09276         34 ISLGIGDPDL-PTPDHIIEAMCKAVEDP------ENHQYPSYEGMLEFRKAVADWYKRRFGVE-----------------   89 (385)
T ss_pred             EEecCCCCCC-CCCHHHHHHHHHHHhCC------CCCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence            4455566665 34567788887766532      12345566788999999999987642221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++++++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++.  ++
T Consensus        90 ---------~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~--------Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~  152 (385)
T PRK09276         90 ---------LDPETEVISLIGSKEGIAHIPLAFVNPGDV--------VLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGF  152 (385)
T ss_pred             ---------CCCCCcEEEccCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcChHHHHHHcCCEEEEEecCCCCCC
Confidence                     123335889999999999999999887776        99999999999999999999999999863  46


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~  333 (435)
                      .+|++++++.+.+++++|++++||||||.+   +++++|+++|++||+++++|++|..+.+.     +...+++ .+. .
T Consensus       153 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~  227 (385)
T PRK09276        153 LPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYD-----GYKPPSFLEVPGA  227 (385)
T ss_pred             cCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecC-----CCCCCChhccCCC
Confidence            689999999888899999999999999999   45799999999999999999999887541     1111111 111 1


Q ss_pred             CCccEEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGFTP--KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p--~g~g~il~~~~~~~~~  366 (435)
                      .+..+...|+.|. ++.  ..+|+++ .++++.+.
T Consensus       228 ~~~~i~~~S~SK~-~g~~GlRiG~~i-~~~~l~~~  260 (385)
T PRK09276        228 KDVGIEFHSLSKT-YNMTGWRIGFAV-GNADLIAG  260 (385)
T ss_pred             cCCEEEEecchhh-cCCcchhheeee-CCHHHHHH
Confidence            2345667788898 444  4489965 55555443

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.90  E-value=3.9e-22  Score=200.02  Aligned_cols=219  Identities=15%  Similarity=0.165  Sum_probs=162.3

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|.. .+|.++++.+.+.+...      ....|....|.+++++++++++...... .                
T Consensus        38 i~l~~g~p~~-~~p~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~~~-~----------------   93 (394)
T PRK05942         38 IDLGMGNPDG-AAPQPVIEAAIAALADP------QNHGYPPFEGTASFRQAITDWYHRRYGV-E----------------   93 (394)
T ss_pred             EEcCCCCCCC-CCCHHHHHHHHHHHhCC------CCccCCCCCCCHHHHHHHHHHHHHHHCC-C----------------
Confidence            4555666776 35666777776655421      1345667778999999999998764221 1                


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .+++.++++|+|+++++.+++.++.++++.        |++++|+|+.+...+...|++++.+|++.  ++
T Consensus        94 ---------~~~~~~i~vt~G~~~al~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  156 (394)
T PRK05942         94 ---------LDPDSEALPLLGSKEGLTHLALAYVNPGDV--------VLVPSPAYPAHFRGPLIAGAQIYPIILKPENDW  156 (394)
T ss_pred             ---------cCCCCeEEEccChHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHHcCCEEEEeecCCccCC
Confidence                     123335889999999999999999887776        99999999999998999999999999973  46


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~-~  333 (435)
                      .+|++++++.++++++++++++||||||.+   +.+++|.++|++||+++|+|++|+.+...     +....+ .++. .
T Consensus       157 ~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-----~~~~~~~~~~~~~  231 (394)
T PRK05942        157 LIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFD-----GYQPTSLLEIPGA  231 (394)
T ss_pred             ccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccC-----CCCCCChhhCCCc
Confidence            799999999998899999999999999999   45899999999999999999999887641     111111 1111 1


Q ss_pred             CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      .+..+.+.|+.|.. .++.++|+++. ++++.+.
T Consensus       232 ~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~  264 (394)
T PRK05942        232 KDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQG  264 (394)
T ss_pred             cccEEEEecchhccCChhhheeeeec-CHHHHHH
Confidence            23445567788963 34466899654 5555443

>TIGR01814 kynureninase kynureninase

Probab=99.90  E-value=9.6e-22  Score=197.95  Aligned_cols=231  Identities=16%  Similarity=0.128  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEE-
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKV-  249 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v-  249 (435)
                      .+..+.++ + +++|++++ ++++|+|+|+++.+++.++..+++     ++.+|++++.+|++..    ..++..|+++ 
T Consensus        71 ~~~~~~~~-~-~l~g~~~~-~v~~~~~~t~~l~~~~~~~~~~~~-----~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~  142 (406)
T TIGR01814        71 TLDESLLK-L-RLVGAKED-EVVVMNTLTINLHLLLASFYKPTP-----KRYKILLEAKAFPSDHYAIESQLQLHGLTVE  142 (406)
T ss_pred             hhhhhhcc-c-cccCCCCC-cEEEeCCchHHHHHHHHHhcCCcC-----CccEEEecCCCCChHHHHHHHHHHhcCCCcc
Confidence            33333333 4 78998765 899999999999999988743321     1235888889999833    3456678887 


Q ss_pred             ---EEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        250 ---KHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       250 ---~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                         +.++.++++.+|++++++.+.   ++|++|++++++|.+|.+.|+++|.++|+++|+++++|++++.+..       
T Consensus       143 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-------  215 (406)
T TIGR01814       143 ESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-------  215 (406)
T ss_pred             cceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-------
Confidence               566666667889999988874   6899999999999999999999999999999999999999975443       


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC----------C---CCccccCCCc
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY----------G---SPSVSGSRSG  390 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~----------~---~~~~~gsr~~  390 (435)
                          ++++...|+|++++++|||+++|+| |.++++++..... ......|.+...          .   ..-..|+.+.
T Consensus       216 ----~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~  289 (406)
T TIGR01814       216 ----PLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTE-RPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPI  289 (406)
T ss_pred             ----ccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhc-CCCCCcccCCCCccccccccccCCCccceeeCCccH
Confidence                6788788999999999999877778 6656665543221 111223322110          0   0001355555


Q ss_pred             hHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        391 GIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       391 ~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ..++++.++++.+   |.+...++.+.+.+++.+.++++
T Consensus       290 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~  328 (406)
T TIGR01814       290 LSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKAR  328 (406)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence            5655666666654   56666677777777777666554

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PLN02368 alanine transaminase

Probab=99.90  E-value=2.1e-21  Score=194.31  Aligned_cols=191  Identities=13%  Similarity=0.078  Sum_probs=146.9

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-  214 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-  214 (435)
                      ...|....|.+++|+++++++.+.... .                         .++ +++++|+|+++++.+++.++. 
T Consensus       100 ~~~Y~~~~G~~~LR~aia~~~~~~~g~-~-------------------------~~~-~~I~it~Ga~~al~~~~~~l~~  152 (407)
T PLN02368        100 LGAYSDSRGLPGVRKEVAEFIERRDGY-P-------------------------SDP-ELIFLTDGASKGVMQILNAVIR  152 (407)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHhcCC-C-------------------------CCh-hhEEEcccHHHHHHHHHHHHcC
Confidence            445777778999999999988764221 1                         123 389999999999999999987 


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhhc------CceEEEEeCCCCCcc
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAITG------NTVMLVGSMPNFPYG  286 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG  286 (435)
                      ++++.        |++++|+|+.+...++..|++++.+|+++  ++.+|++++++++++      +++++++++||||||
T Consensus       153 ~pGd~--------Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG  224 (407)
T PLN02368        153 GEKDG--------VLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTG  224 (407)
T ss_pred             CCCCE--------EEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCC
Confidence            67776        99999999999999999999999999873  478999999999874      689999999999999


Q ss_pred             cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC-CCCCC-----CC----CCCCccEEEecCCCCCC--ccC
Q psy10210        287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY-PLPPF-----DF----SLPGVTSISVDTHKYGF--TPK  351 (435)
Q Consensus       287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~-~~~~~-----d~----~~~gvd~~~~s~hK~~~--~p~  351 (435)
                      .+   +.+++|+++|++||++||+||+|+.+.+.     +. +..++     ++    ...+-.++..|++|..+  .+.
T Consensus       225 ~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~-----~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl  299 (407)
T PLN02368        225 QCLSEANLREILKFCYQERLVLLGDEVYQQNIYQ-----DERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ  299 (407)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc
Confidence            99   77889999999999999999999988652     10 11110     01    01123455668999742  457


Q ss_pred             CcEEEEE--eCCccccc
Q psy10210        352 GSSVVLY--RDLKYKHC  366 (435)
Q Consensus       352 g~g~il~--~~~~~~~~  366 (435)
                      .+|+++.  .++++.+.
T Consensus       300 RiGy~i~~~~~~~li~~  316 (407)
T PLN02368        300 RGGYFEMTNIPPKTVEE  316 (407)
T ss_pred             ceEEEEEeCCCHHHHHH
Confidence            7899775  35555443

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.89  E-value=2.2e-22  Score=189.83  Aligned_cols=265  Identities=17%  Similarity=0.128  Sum_probs=194.9

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      ..|++|++.+++.++.       |-++|.  .+.+++.+++.+++..+....                          ..
T Consensus        38 ~~pp~i~~Al~~rvdh-------GvfGY~--~~~~~~~~ai~~w~~~r~~~~--------------------------i~   82 (388)
T COG1168          38 PTPPEIIEALRERVDH-------GVFGYP--YGSDELYAAIAHWFKQRHQWE--------------------------IK   82 (388)
T ss_pred             CCCHHHHHHHHHHHhc-------CCCCCC--CCCHHHHHHHHHHHHHhcCCC--------------------------CC
Confidence            5678999999998875       344444  457889999999988754332                          13


Q ss_pred             CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C--CccccHHHHHHH
Q psy10210        192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S--SYTVDLAALQSA  268 (435)
Q Consensus       192 ~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~--~~~~d~~~l~~~  268 (435)
                      + +.+++++|.--++.++++++.+++|.        |++..|.|++|.++.+..|-++...|+- +  .+.+|+++||++
T Consensus        83 ~-e~i~~~p~VVpgi~~~I~~~T~~gd~--------Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~  153 (388)
T COG1168          83 P-EWIVFVPGVVPGISLAIRALTKPGDG--------VVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKA  153 (388)
T ss_pred             c-ceEEEcCcchHhHHHHHHHhCcCCCe--------eEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHH
Confidence            3 47999999999999999999999998        9999999999999999999999999985 3  456799999998


Q ss_pred             hhc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC---ccEEEe
Q psy10210        269 ITG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG---VTSISV  341 (435)
Q Consensus       269 i~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g---vd~~~~  341 (435)
                      +.+ +++++++|+||||+|.+   +++.+|.+||++||+.||+||.|+.+++.     |..+.++.....+   ..+.+.
T Consensus       154 ~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~-----g~~h~~~a~ls~~~a~~~it~~  228 (388)
T COG1168         154 FVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLG-----GHKHIPFASLSERFADNSITLT  228 (388)
T ss_pred             HhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccccccc-----CCCccchhhcChhhhcceEEEe
Confidence            875 56999999999999999   89999999999999999999999999884     4333344322222   245555


Q ss_pred             cCCCCCC-ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHH
Q psy10210        342 DTHKYGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFN  418 (435)
Q Consensus       342 s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~  418 (435)
                      +..|... +...++.+++.+++++.+.......-..         +..+...+.+.-++.+.=+  .+.+.+.++++.+.
T Consensus       229 saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~---------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~  299 (388)
T COG1168         229 SASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGL---------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDY  299 (388)
T ss_pred             eccccccchhhhheeEEecCHHHHHHHHHHHHHhcC---------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence            6789743 4466888899999875442111111111         1122222223333333221  35677888888888


Q ss_pred             HHHHHH-hcCCcccccC
Q psy10210        419 YKSCLQ-NLSDLWLYLP  434 (435)
Q Consensus       419 ~~~~~~-~l~~l~~~~p  434 (435)
                      ++..++ .+|++....|
T Consensus       300 ~~~~l~~~~P~v~v~~p  316 (388)
T COG1168         300 VADFLNKHLPGVKVTEP  316 (388)
T ss_pred             HHHHHHhhCCCcEEecC
Confidence            888887 4788877655

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.89  E-value=3.1e-22  Score=192.69  Aligned_cols=282  Identities=17%  Similarity=0.136  Sum_probs=181.8

Q ss_pred             HHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHH-HHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCc
Q psy10210        117 ILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTE-VFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC  195 (435)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~  195 (435)
                      +++.+.++..++...|+-+...++... .+.+++.+.+ .+.. ..+..-.-|..-.-.....++++.+++++|.+.  .
T Consensus         2 ~~~~l~~~~~~~~~~~h~pgh~~g~~~-~~~~~~~~~~~~~~~-d~~~~~~~d~l~~~~g~i~~~~~~~A~~~ga~~--~   77 (294)
T cd00615           2 LFEALKEYAKRGIISFHVPGHKGGRGF-RKSFYEFYGENLFKA-DVTELTGLDDLLDPTGPIKEAQELAARAFGAKH--T   77 (294)
T ss_pred             hHHHHHHHHhCCCccccCCCCCCCCCc-CHHHHHHhccchhhc-ccCCCCCCCCCCCCChHHHHHHHHHHHHhCCCC--E
Confidence            567778877776666654433322211 3334443321 1111 011100011111123456777788999998753  4


Q ss_pred             eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C----ccccHHHHHHHh
Q psy10210        196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S----YTVDLAALQSAI  269 (435)
Q Consensus       196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~----~~~d~~~l~~~i  269 (435)
                      +++|+|+|+++..++.++..+++.        |+++.++|.++..++...|++++.++.+.  +    +.+|++++++++
T Consensus        78 ~~~~~Gst~a~~~~l~al~~~gd~--------Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l  149 (294)
T cd00615          78 FFLVNGTSSSNKAVILAVCGPGDK--------ILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKAL  149 (294)
T ss_pred             EEEcCcHHHHHHHHHHHcCCCCCE--------EEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHH
Confidence            566999999999999998877776        99999999999999999999999998752  2    368999999999


Q ss_pred             hc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC
Q psy10210        270 TG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG  347 (435)
Q Consensus       270 ~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~  347 (435)
                      ++  +++++++++| |++|.+.|+++|.++|+++|+++++|++|+.+.. |.     +..+.+....|+|+++.|+||++
T Consensus       150 ~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~-~~-----~~~~~~~~~~~~div~~S~hK~l  222 (294)
T cd00615         150 IEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFR-FH-----PILPSSAAMAGADIVVQSTHKTL  222 (294)
T ss_pred             HhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhc-cC-----cccCcchhhcCCcEEEEchhccc
Confidence            64  6899999998 6799999999999999999999999999986432 11     11133444568999999999997


Q ss_pred             CccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        348 FTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       348 ~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .++.+.|++..+++.............        ...+|.+...++++-++.+.+..+| .+..++..+.+.++.+++
T Consensus       223 ~g~~~~~~l~~~~~~~~~~~~~~~~~~--------~~ttsps~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l  292 (294)
T cd00615         223 PALTQGSMIHVKGDLVNPDRVNEALNL--------HQSTSPSYLILASLDVARAMMALEG-KELVEELIELALYARQEI  292 (294)
T ss_pred             chHhHHHHHHhCCCcCCHHHHHHHHHH--------HCCCCcHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHH
Confidence            677777776666552221111101000        0123445555556556665554333 334455555555554443

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.2e-21  Score=196.62  Aligned_cols=220  Identities=16%  Similarity=0.121  Sum_probs=163.4

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|..+ +++++.+.+.+.+...       ...|....|.+.+++.+++.+...... .               
T Consensus        33 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~-~---------------   88 (393)
T PRK05764         33 VISLGAGEPDFD-TPEHIKEAAIEALDDG-------KTKYTPAAGIPELREAIAAKLKRDNGL-D---------------   88 (393)
T ss_pred             EEEeCCCCCCCC-CCHHHHHHHHHHHhcC-------CCCcCCCCChHHHHHHHHHHHHHHhCC-C---------------
Confidence            345666777764 3467888887776532       223556668899999999988664321 1               


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~  257 (435)
                                .++ +++++|+|+++++.+++.++.++++.        |++++|+|..+..+++..|++++.+|++  .+
T Consensus        89 ----------~~~-~~i~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  149 (393)
T PRK05764         89 ----------YDP-SQVIVTTGAKQALYNAFMALLDPGDE--------VIIPAPYWVSYPEMVKLAGGVPVFVPTGEENG  149 (393)
T ss_pred             ----------CCH-HHEEEeCCcHHHHHHHHHHhcCCCCE--------EEecCCCCcchHHHHHHcCCEEEEEecCcccC
Confidence                      123 38999999999999999998777666        9999999999999999999999999987  35


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +.+|+++++++++++++++++++|+||||.+   +++++|.++|++||+++++|++|+.+.+.  +....+.........
T Consensus       150 ~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~  227 (393)
T PRK05764        150 FKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYD--GAEFTSIASLSPELR  227 (393)
T ss_pred             CcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeC--CCCcccHHHcCCCCc
Confidence            6789999999998889999999999999998   57999999999999999999999877541  110000011111223


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      +.++...|++|.. +..|  +|+++ .++++.+.
T Consensus       228 ~~~i~~~s~SK~~-~~~G~RiG~i~-~~~~~~~~  259 (393)
T PRK05764        228 DRTITVNGFSKAY-AMTGWRLGYAA-GPKELIKA  259 (393)
T ss_pred             CCEEEEecCcccc-cCccceeEEEe-cCHHHHHH
Confidence            4577788899984 4334  78855 55555443

>PLN02231 alanine transaminase

Probab=99.89  E-value=2.5e-21  Score=199.71  Aligned_cols=215  Identities=13%  Similarity=0.121  Sum_probs=155.5

Q ss_pred             CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhC
Q psy10210        110 QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN  189 (435)
Q Consensus       110 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g  189 (435)
                      ....|.++++++.+.+.....   .....|+...|.+++|+++++++.+.... +                         
T Consensus       138 ~~~fp~~~i~~a~~~l~~~~~---~~~~~Y~~s~G~~~lReaIA~~~~~r~g~-~-------------------------  188 (534)
T PLN02231        138 HGLFSADAIERAWQILDQIPG---RATGAYSHSQGIKGLRDAIAAGIEARDGF-P-------------------------  188 (534)
T ss_pred             cccCCHHHHHHHHHHHHhcCC---ccccCcCCCCCcHHHHHHHHHHHHhccCC-C-------------------------
Confidence            334555777777665543210   12344667778888888888887664221 1                         


Q ss_pred             CCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHH
Q psy10210        190 GGPETCGCMTSGGTESIMMACKAYRD-YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQ  266 (435)
Q Consensus       190 ~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~  266 (435)
                      .++ ++|++|+|+++++.+++.+++. +++.        |+++.|+|+.+...++..|++++.+|+++  ++.+|+++++
T Consensus       189 ~~p-e~I~iT~Ga~~ai~~~~~~l~~~~gd~--------Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le  259 (534)
T PLN02231        189 ADP-NDIFLTDGASPAVHMMMQLLIRSEKDG--------ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELK  259 (534)
T ss_pred             CCc-ccEEEeCCHHHHHHHHHHHhccCCCCE--------EEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHH
Confidence            233 3899999999999999999874 5666        99999999999999999999999999973  4789999999


Q ss_pred             HHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC-----
Q psy10210        267 SAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF-----  331 (435)
Q Consensus       267 ~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~-----  331 (435)
                      +++++      +++++++++|+||||.+   +.+++|+++|++||++||+||+|..+.+.-    +....++ .+     
T Consensus       260 ~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~----~~~~~s~~~~~~~~g  335 (534)
T PLN02231        260 KQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVP----DKKFHSFKKVARSMG  335 (534)
T ss_pred             HHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC----CCCcccHHHHHhhhc
Confidence            99865      68999999999999999   789999999999999999999999876520    1111111 00     


Q ss_pred             -CCCCccEEE-ecCCCCCC--ccCCcEEEEEe--CCccccc
Q psy10210        332 -SLPGVTSIS-VDTHKYGF--TPKGSSVVLYR--DLKYKHC  366 (435)
Q Consensus       332 -~~~gvd~~~-~s~hK~~~--~p~g~g~il~~--~~~~~~~  366 (435)
                       ....+..++ .|+.|..+  ++..+|++...  ++++.+.
T Consensus       336 ~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~  376 (534)
T PLN02231        336 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQ  376 (534)
T ss_pred             cccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHH
Confidence             011223444 48899533  45778997663  4555543

>PRK08912 hypothetical protein; Provisional

Probab=99.89  E-value=1.1e-21  Score=196.30  Aligned_cols=218  Identities=17%  Similarity=0.112  Sum_probs=165.0

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|+.+ .|.++++.+.+.+...       ...|....|.+++++++++++......+                
T Consensus        28 ~i~l~~g~p~~~-~p~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~----------------   83 (387)
T PRK08912         28 AINLGQGFPDDP-GPEDVRRAAADALLDG-------SNQYPPMMGLPELRQAVAAHYARFQGLD----------------   83 (387)
T ss_pred             eEEccCCCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence            355667778764 4567888777765431       3456677789999999999987643221                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY  258 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~  258 (435)
                                .+++.++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++ +++
T Consensus        84 ----------~~~~~~i~~t~G~~~al~~~~~~~~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  145 (387)
T PRK08912         84 ----------LDPETEVMVTSGATEALAAALLALVEPGDE--------VVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHW  145 (387)
T ss_pred             ----------CCCcccEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEEecCcccC
Confidence                      123237999999999999999998877766        9999999999999999999999999997 467


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~  333 (435)
                      .+|++++++.++++++++++++|+||||.+   +++++|.++|++|++++|+|++|+.+.+.     +....++ .+. .
T Consensus       146 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~  220 (387)
T PRK08912        146 RLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFD-----GRRHIPLMTLPGM  220 (387)
T ss_pred             cCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccC-----CCCCcChhhCCCc
Confidence            899999999998899999999999999998   46888999999999999999999877542     1111111 111 1


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .+.++++.|++|... ....+|+++.. +++.+
T Consensus       221 ~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~  252 (387)
T PRK08912        221 RERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLR  252 (387)
T ss_pred             cCceEEEeechhhccCcCceeEEEecC-HHHHH
Confidence            245788889999842 22458996654 44443

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.89  E-value=2.2e-21  Score=195.38  Aligned_cols=217  Identities=18%  Similarity=0.161  Sum_probs=167.1

Q ss_pred             CCCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210         99 AGLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK  175 (435)
Q Consensus        99 ~~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  175 (435)
                      ..+.+..+.|+.   -.+|..+.+.+.+.+...      ....|.+..|.+++++++++++...... .           
T Consensus        33 ~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~-~-----------   94 (409)
T PLN00143         33 LAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA------KFNSYAPTGGILPARRAIADYLSNDLPY-Q-----------   94 (409)
T ss_pred             ceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc------CCCCCCCCCCCHHHHHHHHHHHHhhcCC-C-----------
Confidence            345666777871   256778888888776642      1234667779999999999998764321 1           


Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                                    .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++
T Consensus        95 --------------~~~-~~I~it~G~~~al~~~~~~l~~~gd~--------v~v~~P~y~~~~~~~~~~g~~~~~~~~~  151 (409)
T PLN00143         95 --------------LSP-DDVYLTLGCKHAAEIIIKVLARPEAN--------ILLPRPGFPDVETYAIFHHLEIRHFDLL  151 (409)
T ss_pred             --------------CCH-hhEEEecChHHHHHHHHHHHcCCCCE--------EEEcCCCCcCHHHHHHHcCCEEEEEecc
Confidence                          133 38999999999999999999888776        9999999999999999999999999985


Q ss_pred             --CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-
Q psy10210        256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-  329 (435)
Q Consensus       256 --~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-  329 (435)
                        +++.+|++++++++.++++++++++||||||.+   +.+++|+++|++|++++++|++|..+.+.     +....++ 
T Consensus       152 ~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-----~~~~~~~~  226 (409)
T PLN00143        152 PEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFG-----SKPFVPMG  226 (409)
T ss_pred             CCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccC-----CCCCcchh
Confidence              456799999999998889999999999999999   56889999999999999999999987652     1111121 


Q ss_pred             CCCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210        330 DFSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL  361 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~  361 (435)
                      .+....-.+++.|+.|. +.+...+|+++..++
T Consensus       227 ~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p  259 (409)
T PLN00143        227 LFASIVPVITLGSISKRWMIPGWGLGWLVTCDP  259 (409)
T ss_pred             hhcccCcEEEEccchhhcCCCccceEEEEeeCc
Confidence            11111224566789998 555678999877544

>PLN02187 rooty/superroot1

Probab=99.89  E-value=1.9e-21  Score=198.13  Aligned_cols=217  Identities=20%  Similarity=0.188  Sum_probs=164.9

Q ss_pred             CCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        100 GLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       100 ~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      .+.+..+-|+.   ..++.++.+.+.+.+..+.      ...|.+..|.+++++++++++...... .            
T Consensus        68 vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lR~aiA~~~~~~~~~-~------------  128 (462)
T PLN02187         68 ILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK------GNSYGPGAGILPARRAVADYMNRDLPH-K------------  128 (462)
T ss_pred             eEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCCCCChHHHHHHHHHHHHHhcCC-C------------
Confidence            34444555652   2456788888888776431      234667778999999999998764221 1            


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                                   .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+. 
T Consensus       129 -------------~~~-~~I~it~G~~~al~~~~~~l~~pGd~--------Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~  186 (462)
T PLN02187        129 -------------LTP-EDIFLTAGCNQGIEIVFESLARPNAN--------ILLPRPGFPHYDARAAYSGLEVRKFDLLP  186 (462)
T ss_pred             -------------CCc-ccEEEeCCHHHHHHHHHHHhcCCCCE--------EEEeCCCCccHHHHHHHcCCEEEEEeCcc
Confidence                         234 38999999999999999999888877        9999999999999999999999999984 


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-C
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D  330 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d  330 (435)
                       +++.+|+++++++++++++++++++||||||.+   +.+++|+++|++||+++|+||+|+.+.+.     +....++ .
T Consensus       187 ~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~-----~~~~~s~~~  261 (462)
T PLN02187        187 EKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFG-----DNPFVSMGK  261 (462)
T ss_pred             ccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccC-----CCCceeHHH
Confidence             568899999999998899999999999999998   56899999999999999999999987652     1111111 1


Q ss_pred             CCCCCccEEEecCCCC-CCccCCcEEEEEeCCc
Q psy10210        331 FSLPGVTSISVDTHKY-GFTPKGSSVVLYRDLK  362 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~  362 (435)
                      +....-.++..|+.|. +.+...+|+++..+++
T Consensus       262 ~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~  294 (462)
T PLN02187        262 FASIVPVLTLAGISKGWVVPGWKIGWIALNDPE  294 (462)
T ss_pred             hccCCcEEEEecchhhcCCccceeEEEEecCch
Confidence            1111124555688998 5555778997775543

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.1e-21  Score=195.87  Aligned_cols=217  Identities=21%  Similarity=0.161  Sum_probs=163.3

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+. .+++.+.+.+.+.+...       ...|....|.+++++++++++.+....+                 
T Consensus        27 i~l~~g~~~~-~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~la~~~~~~~~~~-----------------   81 (382)
T PRK06108         27 LPLWFGESDL-PTPDFIRDAAAAALADG-------ETFYTHNLGIPELREALARYVSRLHGVA-----------------   81 (382)
T ss_pred             EEecCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            4556666765 34567888888776542       2335566789999999999887643211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---C
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS---S  257 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~---~  257 (435)
                               .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++.   +
T Consensus        82 ---------~~~-~~i~~t~g~~~al~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  143 (382)
T PRK06108         82 ---------TPP-ERIAVTSSGVQALMLAAQALVGPGDE--------VVAVTPLWPNLVAAPKILGARVVCVPLDFGGGG  143 (382)
T ss_pred             ---------cCc-ceEEEeCChHHHHHHHHHHhcCCCCE--------EEEeCCCccchHHHHHHCCCEEEEeeCCCCCCC
Confidence                     133 38999999999999999998877766        99999999999999999999999999862   4


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSL  333 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~  333 (435)
                      +.+|++++++.++++++++++++|+||||.+   +++++|.++|+++|+++|+|++|+++.+..    +...+ ..++..
T Consensus       144 ~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~----~~~~~~~~~~~~  219 (382)
T PRK06108        144 WTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP----GGRAPSFLDIAE  219 (382)
T ss_pred             ccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC----CCCCCCHhhcCC
Confidence            5799999999998889999999999999988   578999999999999999999999886520    11111 122222


Q ss_pred             -CCccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210        334 -PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 -~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~  365 (435)
                       ....++..|++|.. .++.++|+++.+ +++.+
T Consensus       220 ~~~~~i~~~S~SK~~g~~G~RiG~~~~~-~~~~~  252 (382)
T PRK06108        220 PDDRIIFVNSFSKNWAMTGWRLGWLVAP-PALGQ  252 (382)
T ss_pred             CcCCEEEEeechhhccCcccceeeeeCC-HHHHH
Confidence             12457778999973 334568996654 44443

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.89  E-value=2.9e-22  Score=203.59  Aligned_cols=265  Identities=17%  Similarity=0.143  Sum_probs=190.9

Q ss_pred             HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHH
Q psy10210         38 TTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEI  117 (435)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i  117 (435)
                      ....-|..|..+|+|+.+..+             -+........++.+.......  ........|..+.|+....|.+.
T Consensus        44 Tv~~ay~~L~~~G~i~~~~gs-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~f~~g~p~~~~fp~~~  108 (459)
T COG1167          44 TVSRAYEELEARGYIESRPGS-------------APPSGRPVRLELLKPSDPELL--EDDPSVIDFAGGLPDPSLFPLEA  108 (459)
T ss_pred             HHHHHHHHHHhCcceeeccCC-------------Ccccccccccchhhhhhcccc--cCCCceecCCCCCCCcccCCHHH
Confidence            346688999999999988754             111111111111111111000  22233456777778777778777


Q ss_pred             HHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceE
Q psy10210        118 LELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGC  197 (435)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~  197 (435)
                      +++...........  .....|....|.++|++++++.+....+.+                          +.++ +|+
T Consensus       109 ~~~~~~~~~~~~~~--~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~--------------------------~~~~-~Ii  159 (459)
T COG1167         109 LRRALARVLRNYGA--SLALQYGPTAGLPELREAIAAYLLARRGIS--------------------------CEPE-QIV  159 (459)
T ss_pred             HHHHHHHHHhhcch--hhhhcCCCCCCcHHHHHHHHHHHHHhcCCc--------------------------cCcC-eEE
Confidence            77666554432111  114556666899999999999988432221                          2444 899


Q ss_pred             EcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEE
Q psy10210        198 MTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVML  276 (435)
Q Consensus       198 ~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v  276 (435)
                      +|+|+++|+.++++.+.++||.        |++++|+|+....+++..|++++.||+|++| +|++++++.+.. +++++
T Consensus       160 iT~G~q~al~l~~~~l~~pGd~--------v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~~~~k~~  230 (459)
T COG1167         160 ITSGAQQALDLLLRLLLDPGDT--------VLVEDPTYPGALQALEALGARVIPVPVDEDG-IDPEALEEALAQWKPKAV  230 (459)
T ss_pred             EeCCHHHHHHHHHHHhCCCCCE--------EEEcCCCcHHHHHHHHHcCCcEEecCCCCCC-CCHHHHHHHHhhcCCcEE
Confidence            9999999999999999999888        9999999999999999999999999999766 999999999875 56666


Q ss_pred             EEe-CCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEEecCCCCCCccC
Q psy10210        277 VGS-MPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSISVDTHKYGFTPK  351 (435)
Q Consensus       277 ~~~-~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~~s~hK~~~~p~  351 (435)
                      +++ +.+||||.+   +..++|.++|++||++||+|+.|+.+.+.     +.+.+++ .....+-.+...|++|.+....
T Consensus       231 y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~-----~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl  305 (459)
T COG1167         231 YVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYD-----GPPPPPLKALDAPGRVIYLGSFSKTLAPGL  305 (459)
T ss_pred             EECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcC-----CCCCCChHhhCCCCCEEEEeeehhhccccc
Confidence            655 889999999   67789999999999999999999988652     2222222 3333466788889999976668


Q ss_pred             CcEEEEEeC
Q psy10210        352 GSSVVLYRD  360 (435)
Q Consensus       352 g~g~il~~~  360 (435)
                      ++|+++...
T Consensus       306 RlG~vv~p~  314 (459)
T COG1167         306 RLGYVVAPP  314 (459)
T ss_pred             ceeeeeCCH
Confidence            999966554

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.89  E-value=1.9e-21  Score=194.67  Aligned_cols=220  Identities=11%  Similarity=0.046  Sum_probs=163.1

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|.. .+++++.+.+.+.+...      ....|....|.+++++++++++......+                 
T Consensus        33 i~l~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-----------------   88 (388)
T PRK07366         33 IDLSLGSSDL-PAPAHALEAIAQSLHDP------STHGYLLFHGTLDFREAAAQWYEQRFGLA-----------------   88 (388)
T ss_pred             EEeCCCCCCC-CCCHHHHHHHHHHHhCc------ccCCCCCCCCCHHHHHHHHHHHHHhhCCc-----------------
Confidence            4455566665 33567777777765421      23456667789999999999987642211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .+++.++++|+|+++++.+++.+++++++.        |++++|+|+.+...++..|++++.+|+++  ++
T Consensus        89 ---------~~~~~~I~it~Gs~~al~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  151 (388)
T PRK07366         89 ---------VDPETEVLPLIGSQEGTAHLPLAVLNPGDF--------ALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDF  151 (388)
T ss_pred             ---------CCCcCeEEECCCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEEECCCccCC
Confidence                     233326999999999999999999888877        99999999999999999999999999973  35


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLP  334 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~  334 (435)
                      .+|++++++.+.++++++++++||||||.+   +.+++|+++|++||++||+||+|..+.+.  +..  ..+. ......
T Consensus       152 ~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~--~~~--~~~~~~~~~~~  227 (388)
T PRK07366        152 LPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFD--GEV--EPPSILQADPE  227 (388)
T ss_pred             CCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccC--CCC--CCCChhhCCCC
Confidence            688999988887789999999999999999   67888999999999999999999988652  110  0111 111111


Q ss_pred             -CccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        335 -GVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       335 -gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                       ...+++.|+.|.. .+...+|+++ .++++.+.
T Consensus       228 ~~~vi~~~SfSK~~g~~GlRiG~~v-~~~~li~~  260 (388)
T PRK07366        228 KSVSIEFFTLSKSYNMGGFRIGFAI-GNAQLIQA  260 (388)
T ss_pred             cccEEEEeecccccCCcchhheehc-CCHHHHHH
Confidence             1245667899984 3457789965 55555543

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.3e-21  Score=196.51  Aligned_cols=218  Identities=13%  Similarity=0.116  Sum_probs=160.8

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+. .+++.+.+.+.+.+...      ...+|. ..|.+++++++++++.......                 
T Consensus        35 i~l~~g~p~~-~~~~~~~~~~~~~~~~~------~~~~y~-~~G~~~lr~aia~~~~~~~g~~-----------------   89 (399)
T PRK07681         35 IDLSIGNPDM-PPADFVREEMVHTANQK------ESYGYT-LSGIQEFHEAVTEYYNNTHNVI-----------------   89 (399)
T ss_pred             EEeCCCCCCC-CCCHHHHHHHHHHHhcc------ccCCCC-CCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence            4555566765 34566777777765431      122232 3689999999999987643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++++++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+++  ++
T Consensus        90 ---------~~~~~~I~it~G~~~al~~~~~~~~~~Gd~--------Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~  152 (399)
T PRK07681         90 ---------LNADKEVLLLMGSQDGLVHLPMVYANPGDI--------ILVPDPGYTAYETGIQMAGATSYYMPLKKENDF  152 (399)
T ss_pred             ---------CCCCCeEEECCCcHHHHHHHHHHhCCCCCE--------EEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence                     233248999999999999999999887776        99999999999999999999999999973  35


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~-~  333 (435)
                      .+|++++++++.+++++|++++||||||.+   +.+++|+++|++||+++|+|++|+.+.+.     +....+ ..+. .
T Consensus       153 ~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-----~~~~~~~~~~~~~  227 (399)
T PRK07681        153 LPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFD-----GNKPISFLSVPGA  227 (399)
T ss_pred             cCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeC-----CCCCCChhhCCCC
Confidence            789999999988889999999999999999   55889999999999999999999987642     111111 1111 1


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ....++..|++|... ....+|+++ .++++.+.
T Consensus       228 ~~~~i~~~S~SK~~~~~GlRiG~~i-~~~~l~~~  260 (399)
T PRK07681        228 KEVGVEINSLSKSYSLAGSRIGYMI-GNEEIVRA  260 (399)
T ss_pred             cccEEEEeecccccCCccceeEEEe-cCHHHHHH
Confidence            123566678999842 335589965 45555543

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.6e-21  Score=194.95  Aligned_cols=217  Identities=15%  Similarity=0.131  Sum_probs=161.2

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      .++..+.|..+ ++.++++.+.+....       ....|....|.+++++++++++......                  
T Consensus        32 i~l~~g~p~~~-~~~~~~~~~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~------------------   85 (384)
T PRK06348         32 IDLSLGDPDLI-TDESIINAAFEDAKK-------GHTRYTDSGGDVELIEEIIKYYSKNYDL------------------   85 (384)
T ss_pred             EEcCCCCCCCC-CCHHHHHHHHHHHhc-------CCCCCCCCCCcHHHHHHHHHHHHHHhCC------------------
Confidence            45566667653 345666655544332       1345667778899999999998754221                  


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~  258 (435)
                              +.++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++  +++
T Consensus        86 --------~~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  148 (384)
T PRK06348         86 --------SFKR-NEIMATVGACHGMYLALQSILDPGDE--------VIIHEPYFTPYKDQIEMVGGKPIILETYEEDGF  148 (384)
T ss_pred             --------CCCh-hhEEEcCChHHHHHHHHHHhcCCCCE--------EEEeCCCCcchHHHHHHcCCEEEEecCCcCcCC
Confidence                    1233 38999999999999999999877776        9999999999999999999999999874  456


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|++++++++++++++|++++||||||.+   +++++|.++|++||+++++|++|+++...  .. ..+...++. ..+
T Consensus       149 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~-~~~~~~~~~-~~~  224 (384)
T PRK06348        149 QINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFY--ED-FVPMATLAG-MPE  224 (384)
T ss_pred             cCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeC--CC-ccchhhcCC-CcC
Confidence            799999999998889999999999999999   57899999999999999999999988642  10 001011111 123


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      -.++..|+.|... +...+|+++.. +++.+
T Consensus       225 ~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~~  254 (384)
T PRK06348        225 RTITFGSFSKDFAMTGWRIGYVIAP-DYIIE  254 (384)
T ss_pred             cEEEEecchhccCCccccceeeecC-HHHHH
Confidence            3566778999843 45778996654 44433

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.89  E-value=4.1e-21  Score=192.30  Aligned_cols=219  Identities=18%  Similarity=0.130  Sum_probs=161.3

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|.. .+++.+.+.+.+.....      ....|....|.+++++++++.+..+....                 
T Consensus        30 ~~l~~g~~~~-~~~~~~~~a~~~~~~~~------~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~-----------------   85 (389)
T PRK05957         30 ISLGQGVVSY-PPPPEAIEALNNFLANP------ENHKYQAVQGIPPLLEAITQKLQQDNGIE-----------------   85 (389)
T ss_pred             EEccCCCCCC-CCCHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            4455556664 45667788887766431      12345566788889888888776543221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV  260 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~  260 (435)
                               .++.+++++|+|+++++..++.++.++++.        |++++|.|..+...++..|++++.+|.++++.+
T Consensus        86 ---------~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  148 (389)
T PRK05957         86 ---------LNNEQAIVVTAGSNMAFMNAILAITDPGDE--------IILNTPYYFNHEMAITMAGCQPILVPTDDNYQL  148 (389)
T ss_pred             ---------CCCCCeEEEeCChHHHHHHHHHHhcCCCCE--------EEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCc
Confidence                     122348999999999999999988777766        999999999998888999999999999877889


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCc
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGV  336 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gv  336 (435)
                      |++++++++++++++|++++|+||||.+-+   +++|.++|++||+++++|++|+.+...  +. .. ...... ....-
T Consensus       149 d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~--~~-~~-~~~~~~~~~~~~  224 (389)
T PRK05957        149 QPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYD--GV-KH-FSPGSIPGSGNH  224 (389)
T ss_pred             CHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCC--CC-Cc-cChhhCCCccCc
Confidence            999999999989999999999999999854   999999999999999999999987642  10 10 011111 11123


Q ss_pred             cEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      .+.+.|+.|. ++..|  +|+++.. +++.+.
T Consensus       225 ~i~~~S~SK~-~g~~GlRiG~~~~~-~~~~~~  254 (389)
T PRK05957        225 TISLYSLSKA-YGFASWRIGYMVIP-IHLLEA  254 (389)
T ss_pred             EEEEecchhh-ccCccceeEEEecC-HHHHHH
Confidence            4566778898 45444  8996654 454433

>PLN02656 tyrosine transaminase

Probab=99.89  E-value=3.6e-21  Score=193.84  Aligned_cols=216  Identities=20%  Similarity=0.139  Sum_probs=166.4

Q ss_pred             CCCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210         99 AGLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK  175 (435)
Q Consensus        99 ~~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  175 (435)
                      +.+.+..+.|+.   ..+|+.+.+.+.+.+...      ....|.+..|.+++++++++++...... .           
T Consensus        32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~-~-----------   93 (409)
T PLN02656         32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSN------KFNGYAPTVGLPQARRAIAEYLSRDLPY-K-----------   93 (409)
T ss_pred             eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHHHhcCC-C-----------
Confidence            345666677761   256678888888776642      2345667779999999999998764221 1           


Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                                    .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++
T Consensus        94 --------------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~i~~~  150 (409)
T PLN02656         94 --------------LSL-DDVFITSGCTQAIDVALSMLARPGAN--------ILLPRPGFPIYELCAAFRHLEVRYVDLL  150 (409)
T ss_pred             --------------CCc-ccEEEeCChHHHHHHHHHHHhCCCCe--------EEEeCCCCCcHHHHHHHcCCEEEEEeCC
Confidence                          233 38999999999999999999877776        9999999999999999999999999985


Q ss_pred             --CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-
Q psy10210        256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-  329 (435)
Q Consensus       256 --~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-  329 (435)
                        +++.+|+++++++++++++++++++|+||||.+   +++++|+++|++||+++|+|++|+.+.+.     +....++ 
T Consensus       151 ~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~  225 (409)
T PLN02656        151 PEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFG-----SNPFVPMG  225 (409)
T ss_pred             CcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccC-----CCCcccHH
Confidence              356799999999998899999999999999999   68999999999999999999999987642     1111121 


Q ss_pred             CCCCCCccEEEecCCCC-CCccCCcEEEEEeC
Q psy10210        330 DFSLPGVTSISVDTHKY-GFTPKGSSVVLYRD  360 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~  360 (435)
                      .+....-.+...|+.|. +.+...+|+++..+
T Consensus       226 ~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~  257 (409)
T PLN02656        226 VFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTD  257 (409)
T ss_pred             HhcccCcEEEEcccchhccCcceeEEEEEEeC
Confidence            11111224566789997 55557899987754

>PRK08068 transaminase; Reviewed

Probab=99.89  E-value=2.5e-21  Score=193.94  Aligned_cols=219  Identities=12%  Similarity=0.098  Sum_probs=161.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+. .+++.+.+.+.+.+...      ....|.+..|.+++++++++++...... +                
T Consensus        35 i~l~~~~p~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~aia~~~~~~~g~-~----------------   90 (389)
T PRK08068         35 INLGQGNPDQ-PTPEHIVEALQEAAENP------ANHKYSPFRGYPFLKEAAADFYKREYGV-T----------------   90 (389)
T ss_pred             EEecCCCCCC-CCCHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHHhCC-C----------------
Confidence            4555666765 33456777777765532      1234556778999999999998754221 1                


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .+++.++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+++  ++
T Consensus        91 ---------~~~~~~i~it~G~~~~l~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~  153 (389)
T PRK08068         91 ---------LDPETEVAILFGGKAGLVELPQCLMNPGDT--------ILVPDPGYPDYLSGVALARAQFETMPLIAENNF  153 (389)
T ss_pred             ---------CCCCccEEEcCCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEeecccccCC
Confidence                     123337999999999999999998877776        99999999999999999999999999973  46


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCC-CC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDF-SL  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~-~~  333 (435)
                      .+|++++++++.+++++|++++||||||.+   +.+++|.++|++|++++|+|++|+.+...     +....+ ... ..
T Consensus       154 ~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~-----~~~~~s~~~~~~~  228 (389)
T PRK08068        154 LPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFD-----GQKPVSFLQTPGA  228 (389)
T ss_pred             CCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccC-----CCCCcChhhCCCc
Confidence            789999999998889999999999999999   56788999999999999999999876431     100001 111 11


Q ss_pred             CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      ....+++.|+.|.. .+...+|+++ .++++.+.
T Consensus       229 ~~~~i~~~S~SK~~g~~GlRiG~~~-~~~~l~~~  261 (389)
T PRK08068        229 KDVGIELYTLSKTFNMAGWRVAFAV-GNESVIEA  261 (389)
T ss_pred             cCCEEEEecchhccCCccceeEeEe-cCHHHHHH
Confidence            22346677899984 2445689965 55665543

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.88  E-value=3.6e-21  Score=194.13  Aligned_cols=223  Identities=15%  Similarity=0.165  Sum_probs=166.4

Q ss_pred             CCCCccccCCCCCC---CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHH
Q psy10210         98 NAGLEYFLELPSQG---RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVC  174 (435)
Q Consensus        98 ~~~~~~~~~~P~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~  174 (435)
                      ...+.+..+.|+..   .+++.+.+.+.+.+...      ....|....|.+++++++++++......++-..       
T Consensus        33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~------~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~-------   99 (412)
T PTZ00433         33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQ------ECNGYPPTVGSPEAREAVATYWRNSFVHKESLK-------   99 (412)
T ss_pred             CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcC------CCCCCCCCCCcHHHHHHHHHHHHhhcccccccc-------
Confidence            34567777888742   46778888887766532      123466667899999999999876422100000       


Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                                   ...++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+
T Consensus       100 -------------~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~i~~  157 (412)
T PTZ00433        100 -------------STIKK-DNVVLCSGVSHAILMALTALCDEGDN--------ILVPAPGFPHYETVCKAYGIEMRFYNC  157 (412)
T ss_pred             -------------CCCCh-hhEEEeCChHHHHHHHHHHhcCCCCE--------EEEccCCcccHHHHHHHcCCEEEEEec
Confidence                         00123 48999999999999999999877776        999999999999999999999999998


Q ss_pred             C--CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-
Q psy10210        255 T--SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-  328 (435)
Q Consensus       255 ~--~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-  328 (435)
                      +  .++.+|++++++++++++++|++++||||||.+   +++++|+++|++||+++|+|++|..+.+.     +...++ 
T Consensus       158 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~  232 (412)
T PTZ00433        158 RPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFN-----GATFTSV  232 (412)
T ss_pred             CccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccC-----CCCccch
Confidence            6  357899999999998899999999999999987   67899999999999999999999987642     111111 


Q ss_pred             CCCCCCCccEEEecCCCCC-CccCCcEEEEEeC
Q psy10210        329 FDFSLPGVTSISVDTHKYG-FTPKGSSVVLYRD  360 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~-~~p~g~g~il~~~  360 (435)
                      ..+....-.+++.|+.|.. .+...+|+++..+
T Consensus       233 ~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~  265 (412)
T PTZ00433        233 ADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVD  265 (412)
T ss_pred             hhccCCCceEEEccchhhcCCCCeeEEEEEEeC
Confidence            1111111235667899974 4557889987643

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.88  E-value=3e-21  Score=191.92  Aligned_cols=172  Identities=17%  Similarity=0.184  Sum_probs=144.2

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcCC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFGM  247 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g~  247 (435)
                      +...+...++++.+++++|.+++ ..+++|++||+++..++.++..+++.        +++.++.+++.  ...++..|+
T Consensus        33 ~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~--------vlv~~~~~~~~~~~~~~~~~g~  104 (368)
T PRK13479         33 DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGK--------VLVPDNGAYGARIAQIAEYLGI  104 (368)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCe--------EEEEeCCchHHHHHHHHHHcCC
Confidence            33456788999999999998653 46889999999999999998766655        88887777664  477888999


Q ss_pred             EEEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        248 KVKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       248 ~v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +++.+|+++++.+|++++++++++  ++++|++++++||||.+.|+++|.++|+++|+++++|++++-           +
T Consensus       105 ~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~-----------g  173 (368)
T PRK13479        105 AHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF-----------G  173 (368)
T ss_pred             cEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc-----------C
Confidence            999999987778999999999864  457899999999999999999999999999999999977632           2


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      ..++++...++|+++.++|||+++|.|+|+++++++
T Consensus       174 ~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~  209 (368)
T PRK13479        174 AIPIDIAELGIDALISSANKCIEGVPGFGFVIARRS  209 (368)
T ss_pred             CccccccccCceEEEecCccccccCCCceEEEECHH
Confidence            235677677899999999999889999999777654

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.88  E-value=5.7e-21  Score=192.12  Aligned_cols=220  Identities=14%  Similarity=0.130  Sum_probs=163.0

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|..+. ++.+.+.+.+.+....      ...|. ..|.+++++++++++........               
T Consensus        46 ~i~L~~g~p~~~~-~~~~~~~l~~~~~~~~------~~~Y~-~~G~~~lr~aia~~~~~~~g~~~---------------  102 (410)
T PRK06290         46 LIDMGVGEPDEMA-DESVVEVLCEEAKKPE------NRGYA-DNGIQEFKEAAARYMEKVFGVKD---------------  102 (410)
T ss_pred             eEEcCCCCCCCCC-CHHHHHHHHHHHhCCC------CCCCC-CCCcHHHHHHHHHHHHHHcCCCc---------------
Confidence            4556667777644 4567777776554221      22233 36899999999999876432110               


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~  257 (435)
                                .+++.++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+++  +
T Consensus       103 ----------~~~~~~I~it~Gs~~al~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~  164 (410)
T PRK06290        103 ----------IDPVTEVIHSIGSKPALAMLPSCFINPGDV--------TLMTVPGYPVTGTHTKYYGGEVYNLPLLEENN  164 (410)
T ss_pred             ----------CCCcceEEEccCHHHHHHHHHHHhCCCCCE--------EEEeCCCCccHHHHHHHcCCEEEEEecCCCcC
Confidence                      123337999999999999999999888776        99999999999999999999999999973  4


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-C
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-L  333 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~  333 (435)
                      +.+|++++++++.+++++|++++||||||.+   +.+++|.++|++||++|++|++|+.+.+.     +......... .
T Consensus       165 ~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~-----~~~~s~~~~~~~  239 (410)
T PRK06290        165 FLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFD-----GKPLSFLSVPGA  239 (410)
T ss_pred             CcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeC-----CCCcChhcCCCc
Confidence            6789999999988889999999999999999   55889999999999999999999987541     1110111111 1


Q ss_pred             CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      .+.+++..|+.|.. .+...+|+++ .++++...
T Consensus       240 ~~~~I~i~SfSK~~g~~GlRiG~ii-~~~~l~~~  272 (410)
T PRK06290        240 KEVGVEIHSLSKAYNMTGWRLAFVV-GNELIVKA  272 (410)
T ss_pred             cccEEEEeechhhcCCchhheEeEE-eCHHHHHH
Confidence            24568888999984 2445689955 45555443

>PRK08960 hypothetical protein; Provisional

Probab=99.88  E-value=4.8e-21  Score=191.74  Aligned_cols=214  Identities=14%  Similarity=0.105  Sum_probs=160.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|.. .+|..+.+.+.+.+...       ...|....|.+++++++++++.......                 
T Consensus        35 i~l~~g~~~~-~~~~~v~~a~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-----------------   89 (387)
T PRK08960         35 IHLEIGEPDF-TTAEPIVAAGQAALAAG-------HTRYTAARGLPALREAIAGFYAQRYGVD-----------------   89 (387)
T ss_pred             EEeCCCCCCC-CCCHHHHHHHHHHHhcC-------CCccCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            4455566664 34778888888877632       2345566789999999999887542211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|.+++.+|++.  ++
T Consensus        90 ---------~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  151 (387)
T PRK08960         90 ---------VDP-ERILVTPGGSGALLLASSLLVDPGKH--------WLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRY  151 (387)
T ss_pred             ---------CCh-hhEEEccCcHHHHHHHHHHhcCCCCE--------EEEcCCCCcchHHHHHhcCCeEEEEecCcccCC
Confidence                     233 38999999999999999999877776        99999999999999999999999999873  45


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|+++++++++++++++++++||||||.+   +.+++|+++|++||+++++|++|.++.+.  +.   ..+....  ..
T Consensus       152 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~--~~---~~~~~~~--~~  224 (387)
T PRK08960        152 QLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYG--VD---AASVLEV--DD  224 (387)
T ss_pred             CCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CC---CCChhhc--cC
Confidence            799999999999899999999999999998   55778888999999999999999886541  10   0111111  12


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      -.++..|++|..+ +...+|+++.. +++.+
T Consensus       225 ~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~  254 (387)
T PRK08960        225 DAFVLNSFSKYFGMTGWRLGWLVAP-PAAVP  254 (387)
T ss_pred             CEEEEeecccccCCcccEEEEEEcC-HHHHH
Confidence            2456678999842 33458996654 44443

>PRK07337 aminotransferase; Validated

Probab=99.88  E-value=3.3e-21  Score=192.98  Aligned_cols=213  Identities=16%  Similarity=0.133  Sum_probs=158.5

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+.+ .+..+.+.+.+.+...       ...|....|.+++++++++++.......                 
T Consensus        33 i~l~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~-----------------   87 (388)
T PRK07337         33 IHMGIGEPDFT-APEPVVEAAARALRRG-------VTQYTSALGLAPLREAIAAWYARRFGLD-----------------   87 (388)
T ss_pred             EEeCCcCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            45566667653 3456777777765432       2335556688999999999887542211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++ +++++|+|+++|+.+++.++.++++.        |++++|+|+++...++..|++++.+|++.  ++
T Consensus        88 ---------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  149 (388)
T PRK07337         88 ---------VAP-ERIVVTAGASAALLLACLALVERGDE--------VLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERF  149 (388)
T ss_pred             ---------CCh-HhEEEecCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEeecCCccCC
Confidence                     133 38999999999999999998877776        99999999999999999999999999973  56


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|++++++.+++++++|++++|+||||.+   +++++|.++|+++++++++|++|.++...     +......+   .+
T Consensus       150 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~---~~  221 (388)
T PRK07337        150 QLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYD-----AAPVSALS---LG  221 (388)
T ss_pred             cCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccC-----CCCcChhh---cc
Confidence            899999999999899999999999999998   56899999999999999999999876431     11101111   12


Q ss_pred             ccEE-EecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSI-SVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~-~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .+++ +.|++|... ....+|+++.. +++.+
T Consensus       222 ~~vi~~~S~SK~~~~~G~RiG~~~~~-~~l~~  252 (388)
T PRK07337        222 DDVITINSFSKYFNMTGWRLGWLVVP-EALVG  252 (388)
T ss_pred             CCEEEEEechhhcCCchhheeeeecC-HHHHH
Confidence            3444 558899842 33558996654 44433

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.88  E-value=5.9e-21  Score=196.10  Aligned_cols=210  Identities=16%  Similarity=0.145  Sum_probs=151.5

Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC
Q psy10210        114 RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE  193 (435)
Q Consensus       114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~  193 (435)
                      |..+++.+.+.+....    .+...|....|.+++|+++++++...... +                         .++ 
T Consensus        90 P~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~~~~~~g~-~-------------------------~~~-  138 (481)
T PTZ00377         90 PADVVARAKEYLNAIG----GGTGAYTDSAGYPFVRKAVAAFIERRDGV-P-------------------------KDP-  138 (481)
T ss_pred             CHHHHHHHHHHHHhCC----CcccCcCcccCCHHHHHHHHHHHHHhcCC-C-------------------------CCh-
Confidence            4466666655444321    12344666667888888888777653221 1                         233 


Q ss_pred             CceEEcCChHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhh
Q psy10210        194 TCGCMTSGGTESIMMACKAYR-DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAIT  270 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~  270 (435)
                      ++|++|+|+++++.+++.++. +++|.        |++++|+|+.+...++..|++++.+|++  +++.+|+++++++++
T Consensus       139 ~~I~it~Ga~~al~~~~~~l~~~~gD~--------Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~  210 (481)
T PTZ00377        139 SDIFLTDGASSGIKLLLQLLIGDPSDG--------VMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYE  210 (481)
T ss_pred             hhEEEcCCHHHHHHHHHHHhccCCCCE--------EEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHH
Confidence            489999999999999999997 67776        9999999999999999999999999987  346899999999987


Q ss_pred             c------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-----CCCCC--
Q psy10210        271 G------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-----DFSLP--  334 (435)
Q Consensus       271 ~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-----d~~~~--  334 (435)
                      +      +++++++++||||||.+   +.+++|+++|++||+++|+|++|+.+.+.  +  +.+..++     ++...  
T Consensus       211 ~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~--~--~~~~~s~~~~~~~l~~~~~  286 (481)
T PTZ00377        211 QAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYD--G--EKPFISFRKVLLELPAEYN  286 (481)
T ss_pred             HHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccC--C--CCCcccHHHHHHhhccccc
Confidence            5      78999999999999999   55999999999999999999999887541  0  1111111     11111  


Q ss_pred             -Cc-cEEEecCCCCCC--ccCCcEEEEE--eCCccccc
Q psy10210        335 -GV-TSISVDTHKYGF--TPKGSSVVLY--RDLKYKHC  366 (435)
Q Consensus       335 -gv-d~~~~s~hK~~~--~p~g~g~il~--~~~~~~~~  366 (435)
                       +. .++..|+.|..+  .+..+|+++.  .++++.+.
T Consensus       287 ~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~  324 (481)
T PTZ00377        287 TDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQ  324 (481)
T ss_pred             CCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHH
Confidence             12 244558999533  4567899766  25555443

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.88  E-value=9.2e-21  Score=191.78  Aligned_cols=216  Identities=21%  Similarity=0.173  Sum_probs=162.4

Q ss_pred             CCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        100 GLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       100 ~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      .+.+..+-|+.   ..+++++.+.+.+.+..+.      ...|....|.+++++++++.+...... .            
T Consensus        54 ~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~~~-~------------  114 (430)
T PLN00145         54 VLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGK------YNSYSTCVGLLPARRAIAEYLSRDLPY-E------------  114 (430)
T ss_pred             eeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCc------CCCCCCCccCHHHHHHHHHHHhhccCC-C------------
Confidence            34444555541   2456778888888776421      224556678999999999988653221 1            


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                                   .++ +++++|+|+++|+.+++.++.++++.        |++++|+|+.+...+...|++++.+++. 
T Consensus       115 -------------~~~-~~v~it~G~~~al~l~~~~l~~~Gd~--------Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~  172 (430)
T PLN00145        115 -------------LST-DDIYLTAGCAQAIEIIMSVLAQPGAN--------ILLPRPGYPLYEARAVFSGLEVRHFDLLP  172 (430)
T ss_pred             -------------CCh-hhEEEeCCHHHHHHHHHHHhcCCCCE--------EEEcCCCCccHHHHHHHcCCEEEEeeCCc
Confidence                         133 38999999999999999999877776        9999999999999999999999999874 


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-C
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D  330 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d  330 (435)
                       +++.+|+++++++++++++++++++||||||.+-   .+++|.++|++||+++|+|++|+.+.+.     +....++ .
T Consensus       173 ~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~-----~~~~~~~~~  247 (430)
T PLN00145        173 ERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFG-----SKPFVPMGV  247 (430)
T ss_pred             ccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccC-----CCCccchhh
Confidence             4688999999999999999999999999999994   5889999999999999999999987642     1111121 1


Q ss_pred             CCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210        331 FSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL  361 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~  361 (435)
                      +......+...|+.|. +.....+|+++..++
T Consensus       248 ~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~  279 (430)
T PLN00145        248 FGEVAPVLTLGSISKRWVVPGWRLGWIATCDP  279 (430)
T ss_pred             hcccCcEEEEeccccccCCCCeeEEEEEEecc
Confidence            1112234566689998 444577899877543

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.88  E-value=5.4e-21  Score=191.95  Aligned_cols=219  Identities=17%  Similarity=0.156  Sum_probs=162.4

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+.+ +++.+.+.+.+.+.        ....|....|.+++++++++++.+....+.+              
T Consensus        31 ~i~l~~~~p~~~-~~~~~~~~~~~~~~--------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~--------------   87 (396)
T PRK09147         31 PISLSIGEPKHP-TPAFIKDALAANLD--------GLASYPTTAGLPALREAIAAWLERRYGLPAL--------------   87 (396)
T ss_pred             eEecCCCCCCCC-CCHHHHHHHHHHhh--------hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcC--------------
Confidence            445566667653 35667777766543        1344666778999999999998764221101              


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHH---hhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDY---AREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~---~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                                 ++++++++|+|+++++.++++++.++   ++.        |++++|+|+.+...++..|++++.||+++
T Consensus        88 -----------~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~vp~~~  148 (396)
T PRK09147         88 -----------DPATQVLPVNGSREALFAFAQTVIDRDGPGPL--------VVCPNPFYQIYEGAALLAGAEPYFLNCDP  148 (396)
T ss_pred             -----------CccceEEECCChHHHHHHHHHHHcCCCCCCCE--------EEEcCCCccchHHHHHhcCCEEEEeccCc
Confidence                       23337999999999999999999887   555        99999999999999999999999999973


Q ss_pred             --CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-C-
Q psy10210        257 --SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-F-  329 (435)
Q Consensus       257 --~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~-  329 (435)
                        ++.+|++++++.+.++++++++++||||||.+   +.+++|+++|++|+++|++|++|+.+.+.  ..  .+... + 
T Consensus       149 ~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~--~~~~~~~~  224 (396)
T PRK09147        149 ANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFD--EA--APPLGLLE  224 (396)
T ss_pred             cccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccC--CC--CCCchhhh
Confidence              46799999998887889999999999999999   67899999999999999999999987642  10  00000 1 


Q ss_pred             -----CCCCCCccEEEecCCC-CCCccCCcEEEEEeCCcccc
Q psy10210        330 -----DFSLPGVTSISVDTHK-YGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       330 -----d~~~~gvd~~~~s~hK-~~~~p~g~g~il~~~~~~~~  365 (435)
                           +.....-.++..|+.| ++.+...+|+++ .++++.+
T Consensus       225 ~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~-~~~~l~~  265 (396)
T PRK09147        225 AAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVA-GDAALLK  265 (396)
T ss_pred             hccccCccccccEEEEeccccccCCccceeeeec-CCHHHHH
Confidence                 0001123477778999 555567889955 4455543

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.88  E-value=1.4e-20  Score=189.19  Aligned_cols=213  Identities=19%  Similarity=0.262  Sum_probs=162.4

Q ss_pred             CccccCCCC---CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210        101 LEYFLELPS---QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME  177 (435)
Q Consensus       101 ~~~~~~~P~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e  177 (435)
                      ..+..+.|+   .-.+++.+.+.+.+.+...      ....|.+..|.+++++++++.+.....  .+            
T Consensus        34 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~aia~~~~~~~~--~~------------   93 (401)
T TIGR01264        34 IKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG------KYNGYAPTVGALSAREAIASYYHNPDG--PI------------   93 (401)
T ss_pred             eecCCCCCCCcCCCCCCHHHHHHHHHHHhcc------CCCCCCCCCCCHHHHHHHHHHHhhcCC--CC------------
Confidence            455666675   2345667788777765532      123466777899999999999876321  11            


Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--  255 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--  255 (435)
                                   ++ +++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|++++.++++  
T Consensus        94 -------------~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~  151 (401)
T TIGR01264        94 -------------EA-DDVVLCSGCSHAIEMCIAALANAGQN--------ILVPRPGFPLYETLAESMGIEVKLYNLLPD  151 (401)
T ss_pred             -------------CH-HHEEECcChHHHHHHHHHHhCCCCCE--------EEEeCCCChhHHHHHHHcCCEEEEeecCCc
Confidence                         22 37999999999999999999877666        9999999999999999999999999886  


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF  331 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~  331 (435)
                      +++.+|+++++++++++++++++++|+||||.+   +++++|+++|+++|+++++|++|.+|.+.     +...+++ .+
T Consensus       152 ~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~  226 (401)
T TIGR01264       152 KSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFS-----GATFEPLASL  226 (401)
T ss_pred             cCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccC-----CcccccHHHc
Confidence            357899999999998889999999999999999   57999999999999999999999988652     1111121 11


Q ss_pred             CCCCccEEEecCCCC-CCccCCcEEEEEeC
Q psy10210        332 SLPGVTSISVDTHKY-GFTPKGSSVVLYRD  360 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~-~~~p~g~g~il~~~  360 (435)
                      ....-.+++.|+.|. +.+...+|+++..+
T Consensus       227 ~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~  256 (401)
T TIGR01264       227 SSTVPILSCGGLAKRWLVPGWRLGWIIIHD  256 (401)
T ss_pred             CCCCcEEEEccCcccCCCccceEEEEEecC
Confidence            111114567789995 66667899987765

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK12414 putative aminotransferase; Provisional

Probab=99.88  E-value=8.6e-21  Score=189.63  Aligned_cols=218  Identities=17%  Similarity=0.135  Sum_probs=162.1

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|.. .+++.+.+.+.+.....       ...|.+..|.+++++++++++....+..                
T Consensus        31 ~i~l~~g~p~~-~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~----------------   86 (384)
T PRK12414         31 ALNLSQGAPNF-APDPALVEGVARAMRDG-------HNQYAPMAGIAALREALAEKTERLYGAR----------------   86 (384)
T ss_pred             eEEcCCCCCCC-CCCHHHHHHHHHHHHhC-------CCCcCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence            34556666765 34566777777655431       2345566788899998888876643221                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY  258 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~  258 (435)
                                .++++++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|++++.+|++ +++
T Consensus        87 ----------~~~~~~i~it~g~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  148 (384)
T PRK12414         87 ----------YDPASEVTVIASASEGLYAAISALVHPGDE--------VIYFEPSFDSYAPIVRLQGATPVAIKLSPEDF  148 (384)
T ss_pred             ----------CCCCCcEEEECChHHHHHHHHHHhcCCCCE--------EEEeCCCccchHHHHHHcCCEEEEEecCcccc
Confidence                      122247999999999999999999887776        9999999999999999999999999987 467


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~  333 (435)
                      .+|++++++++++++++|++++||||||.+   +++++|.++|++||+++++|++|..+.+.     +....++ .+. .
T Consensus       149 ~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~-----~~~~~~~~~~~~~  223 (384)
T PRK12414        149 RVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFD-----GARHHSMARHREL  223 (384)
T ss_pred             ccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCC-----CCCccCcccCcCc
Confidence            899999999998899999999999999998   78999999999999999999999876541     1111111 111 1


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .+-.+++.|++|..+ ....+|+++.. +++.+
T Consensus       224 ~~~~i~~~SfSK~~~~pGlRiG~~v~~-~~l~~  255 (384)
T PRK12414        224 AERSVIVSSFGKSYHVTGWRVGYCLAP-AELMD  255 (384)
T ss_pred             cCcEEEEecccccccCccceEEEEecC-HHHHH
Confidence            123467778999742 44668996654 45443

>PRK07777 aminotransferase; Validated

Probab=99.88  E-value=7.8e-21  Score=190.21  Aligned_cols=217  Identities=19%  Similarity=0.141  Sum_probs=162.1

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|+... +.++++.+.+.+...       ...|....|.+++++++++.+.......                
T Consensus        26 ~i~l~~g~p~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~----------------   81 (387)
T PRK07777         26 AVNLGQGFPDEDG-PPEMLEAAQEAIAGG-------VNQYPPGPGIPELRAAIAAQRRRRYGLE----------------   81 (387)
T ss_pred             eEEccCCCCCCCC-CHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence            3556667787755 456777777665432       2345566789999999998876542221                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS---  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~---  256 (435)
                                ..+++++++|+|+++++.+++.++.++++.        |+++.|+|+.+..+++..|.+++.+|+++   
T Consensus        82 ----------~~~~~~i~~t~G~~~al~~~~~~~~~~gd~--------vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  143 (387)
T PRK07777         82 ----------YDPDTEVLVTVGATEAIAAAVLGLVEPGDE--------VLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGR  143 (387)
T ss_pred             ----------CCCCCcEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHCCCEEEEeecCCccC
Confidence                      123336999999999999999988776666        99999999999999999999999999863   


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FS  332 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~  332 (435)
                      ++.+|++++++++.+++++|++++|+||||.+   +++++|.++|++|++++++|++|+++.+.     +....++. +.
T Consensus       144 ~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~-----~~~~~~~~~~~  218 (387)
T PRK07777        144 GFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFD-----GARHLPLATLP  218 (387)
T ss_pred             CCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccC-----CCCcccHhhCC
Confidence            45699999999998899999999999999998   56999999999999999999999887642     11111221 11


Q ss_pred             -CCCccEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210        333 -LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYK  364 (435)
Q Consensus       333 -~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~  364 (435)
                       ..+.+++..|++|... ....+|+++. ++++.
T Consensus       219 ~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~  251 (387)
T PRK07777        219 GMRERTVTISSAAKTFNVTGWKIGWACG-PAPLI  251 (387)
T ss_pred             CCcCcEEEEeechhhccCcCceeEEEec-CHHHH
Confidence             1346788889999843 2345788654 44444

>PRK07324 transaminase; Validated

Probab=99.88  E-value=2.3e-21  Score=192.90  Aligned_cols=209  Identities=13%  Similarity=0.048  Sum_probs=157.0

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+-|+. .+|..+ +.+.+.+...       ...|+...|.+++++++++++..                      
T Consensus        29 ~~~~~~e~~~-~~~~~~-~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~~~~----------------------   77 (373)
T PRK07324         29 DSLTLEELLA-LAGKNP-EAFYQELGQK-------KLTYGWIEGSPEFKEAVASLYQN----------------------   77 (373)
T ss_pred             CCCcHHHHHh-ccCcch-HHHHHHHhcC-------CccCCCCCCCHHHHHHHHHHhcC----------------------
Confidence            4455566655 455566 6666665432       34566777999999999987742                      


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++ +++++|+|+++++.+++.++.++++.        |+++.|+|..+...++..|++++.+|++.  ++
T Consensus        78 ---------~~~-~~vi~t~G~~~al~~~~~~l~~~gd~--------Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~  139 (373)
T PRK07324         78 ---------VKP-ENILQTNGATGANFLVLYALVEPGDH--------VISVYPTYQQLYDIPESLGAEVDYWQLKEENGW  139 (373)
T ss_pred             ---------CCh-hhEEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEEecccccCC
Confidence                     123 38999999999999999999887776        99999999999999999999999999973  45


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|+++++++++++++++++++|+||||.+-+   +++|+++|++||+++++|++|.++...     +......+.  ..
T Consensus       140 ~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~-----~~~~s~~~~--~~  212 (373)
T PRK07324        140 LPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED-----GSTPSIADL--YE  212 (373)
T ss_pred             CCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC-----CCCCChhhc--cC
Confidence            68999999999889999999999999999955   999999999999999999999876541     100011121  12


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      -.+...|++|... ....+|+++. ++++.+.
T Consensus       213 ~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~  243 (373)
T PRK07324        213 KGISTNSMSKTYSLPGIRVGWIAA-NEEVIDI  243 (373)
T ss_pred             CEEEEecchhhcCCccceeEEEec-CHHHHHH
Confidence            2355668889743 3355799665 5655543

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.88  E-value=7.6e-21  Score=191.24  Aligned_cols=219  Identities=16%  Similarity=0.151  Sum_probs=160.9

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+.. .|.++++.+.+.....      ....|....|.+++|+++++++.......                 
T Consensus        36 ~~l~~g~p~~~-~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~-----------------   91 (403)
T PRK08636         36 IDFSMGNPDGP-TPQHIIDKLCESAQKP------KTHGYSVSKGIYKLRLAICNWYKRKYNVD-----------------   91 (403)
T ss_pred             EEcCCcCCCCC-CCHHHHHHHHHHhcCC------ccCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            44555667764 4666777776655321      23456677799999999999987643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~  258 (435)
                               .+++.++++|+|+++++.+++.+++++++.        |++++|+|+.+...++..|++++.+|++  +++
T Consensus        92 ---------~~~~~~I~it~G~~~al~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  154 (403)
T PRK08636         92 ---------LDPETEVVATMGSKEGYVHLVQAITNPGDV--------AIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDF  154 (403)
T ss_pred             ---------CCCCCeEEECCChHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEEeccccccC
Confidence                     123226999999999999999999988877        9999999999999999999999999985  446


Q ss_pred             cccHHHH----HHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        259 TVDLAAL----QSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       259 ~~d~~~l----~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      .+|++.+    +++++   .+++++++++||||||.+   +.+++|+++|++|++++|+|++|+.+.+.     +...++
T Consensus       155 ~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~-----~~~~~~  229 (403)
T PRK08636        155 ELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFD-----GYKTPS  229 (403)
T ss_pred             ccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccC-----CCCCCC
Confidence            7887754    55554   478999999999999999   67899999999999999999999987541     111111


Q ss_pred             C-CCC-CCCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        329 F-DFS-LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       329 ~-d~~-~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      + ... .....+.+.|+.|.. .+...+|+++ .++++.+.
T Consensus       230 ~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv-~~~~li~~  269 (403)
T PRK08636        230 ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV-GNKKLVGA  269 (403)
T ss_pred             hhcCCCccccEEEEEecccccCCccceeeeee-CCHHHHHH
Confidence            1 111 112345567899985 3557789955 55555443

>PRK09082 methionine aminotransferase; Validated

Probab=99.88  E-value=4.3e-21  Score=191.97  Aligned_cols=218  Identities=16%  Similarity=0.113  Sum_probs=162.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|+.+. ++.+.+.+.+.....       ...|....|.+++++++++.+.+.....                 
T Consensus        33 i~l~~g~~~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~~a~~l~~~~~~~-----------------   87 (386)
T PRK09082         33 INLSQGFPDFDG-PPYLVEALAYAMAAG-------HNQYPPMTGVAALREAIAAKTARLYGRQ-----------------   87 (386)
T ss_pred             EEecCCCCCCCC-CHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence            455666676533 456777777765432       2345566788999999988877643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCcc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYT  259 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~  259 (435)
                               .+++.++++|+|+++|+.+++.++.++++.        |++++|+|.++...++..|++++.+|++ +++.
T Consensus        88 ---------~~~~~~i~~t~G~~~al~~~~~~~~~~gd~--------Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  150 (386)
T PRK09082         88 ---------YDADSEITVTAGATEALFAAILALVRPGDE--------VIVFDPSYDSYAPAIELAGGRAVRVALQPPDFR  150 (386)
T ss_pred             ---------CCCCCcEEEeCCHHHHHHHHHHHHcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEEecCccccc
Confidence                     122237999999999999999998877776        9999999999999999999999999997 5678


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCC
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG  335 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g  335 (435)
                      +|+++++++++++++++++++|+||||.+   +++++|.++|++||+++|+|++|+.+.+.  +..+  ....... ..+
T Consensus       151 ~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~--~~~~--~s~~~~~~~~~  226 (386)
T PRK09082        151 VDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFD--GAGH--ASVLRHPELRE  226 (386)
T ss_pred             CCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccC--CCCC--CChhhCcCccC
Confidence            99999999998899999999999999987   78999999999999999999999877552  1100  0111111 123


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ..++..|++|..+ ....+|+++. ++++.+
T Consensus       227 ~~i~~~S~SK~~~~~G~RiG~iv~-~~~l~~  256 (386)
T PRK09082        227 RAFVVSSFGKTYHVTGWKVGYCVA-PAALSA  256 (386)
T ss_pred             cEEEEeechhhccchhhhhhhhhC-CHHHHH
Confidence            4677778999842 3356799554 455544

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.88  E-value=8.1e-21  Score=187.50  Aligned_cols=216  Identities=14%  Similarity=0.111  Sum_probs=156.6

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +..+.|..+. ++++.+.+.+....        ...|....|.+++++++++++......+                   
T Consensus         5 ~~~g~p~~~~-~~~~~~~~~~~~~~--------~~~Y~~~~G~~~lr~aia~~~~~~~g~~-------------------   56 (350)
T TIGR03537         5 FGTGDPKEPT-PPFIRKALIDAVPE--------VSQYPSALGTKALREAISGWFERRFGVK-------------------   56 (350)
T ss_pred             ccCCCCCCCC-CHHHHHHHHHHHhc--------cCCCCCCCCCHHHHHHHHHHHHHHhCCC-------------------
Confidence            3445565433 45677777665321        2335566789999999999987642211                   


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTV  260 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~  260 (435)
                             .+++.++++|+|+++++.+++.++.++++.     +++|++++|+|+.+...++..|++++.+|++  .++.+
T Consensus        57 -------~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~-----~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  124 (350)
T TIGR03537        57 -------LDPDAQVLPSAGSKEAIFHFPLVFIDPEED-----RRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLL  124 (350)
T ss_pred             -------CCCCCcEEEcCChHHHHHHHHHHHcCCCCC-----CceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCcc
Confidence                   123237999999999999999998876631     2359999999999999999999999999996  34568


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      |++++++++.++++++++++|+||||.+-+   +++|.++|++||+++++|++|+.+...      .......-....-.
T Consensus       125 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~------~~~~~~~~~~~~~~  198 (350)
T TIGR03537       125 RLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG------EPPHSALEVGIENV  198 (350)
T ss_pred             CHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC------CCCCchhhcCcCCE
Confidence            999999999889999999999999999844   999999999999999999999876431      11111110011234


Q ss_pred             EEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210        338 SISVDTHKYG-FTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       338 ~~~~s~hK~~-~~p~g~g~il~~~~~~~~  365 (435)
                      ++..|++|.. .....+|+++ .++++.+
T Consensus       199 i~~~s~SK~~g~~GlRiG~~~-~~~~~~~  226 (350)
T TIGR03537       199 LAFHSLSKRSGMTGYRSGFVA-GDEKLIS  226 (350)
T ss_pred             EEEeecccccCCccccceeee-cCHHHHH
Confidence            6666899973 2334578865 5555544

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK07682 hypothetical protein; Validated

Probab=99.87  E-value=9.8e-21  Score=188.90  Aligned_cols=218  Identities=16%  Similarity=0.114  Sum_probs=161.4

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|+.+ ++..+.+.+.+.+...       ...|....|.+++++++++++......+                 
T Consensus        23 i~l~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-----------------   77 (378)
T PRK07682         23 ISLGVGEPDFV-TPWNVREASIRSLEQG-------YTSYTANAGLLELRQEIAKYLKKRFAVS-----------------   77 (378)
T ss_pred             EEeCCCCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence            45566667654 3445666666654421       2345566789999999999987643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~  258 (435)
                               .++++++++|+|+++|+.++++++.++++.        |++++|+|+.+...++..|.+++.+|++  +++
T Consensus        78 ---------~~~~~~i~~t~G~~~al~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  140 (378)
T PRK07682         78 ---------YDPNDEIIVTVGASQALDVAMRAIINPGDE--------VLIVEPSFVSYAPLVTLAGGVPVPVATTLENEF  140 (378)
T ss_pred             ---------CCCCCcEEEeCChHHHHHHHHHHhCCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEeecCCccCC
Confidence                     123337999999999999999999877776        9999999999999999999999999985  357


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|++++++++.++++++++++|+||||.+   +++++|.++|++|++++|+|++|+.+...  .. ..+...++ ....
T Consensus       141 ~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~-~~~~~~~~-~~~~  216 (378)
T PRK07682        141 KVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYD--EA-YTSFASIK-GMRE  216 (378)
T ss_pred             CCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccC--CC-CCChhhcc-cccC
Confidence            899999999998899999999999999998   56999999999999999999999987652  10 00001111 1112


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      -.++..|++|... .+..+|+++. ++++.+
T Consensus       217 ~~i~~~S~SK~~~~~GlR~G~~~~-~~~~i~  246 (378)
T PRK07682        217 RTILISGFSKGFAMTGWRLGFIAA-PVYFSE  246 (378)
T ss_pred             CEEEEecCcccccChhhhhhhhhc-CHHHHH
Confidence            3577778999843 2345899665 455544

>PRK08363 alanine aminotransferase; Validated

Probab=99.87  E-value=9.9e-21  Score=190.17  Aligned_cols=212  Identities=15%  Similarity=0.123  Sum_probs=158.8

Q ss_pred             CCccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210        100 GLEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME  177 (435)
Q Consensus       100 ~~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e  177 (435)
                      .+.+..+.|.  .-.+++.+.+.+.+.+...       ...|....|.+++++++++++...... .             
T Consensus        32 ~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~-~-------------   90 (398)
T PRK08363         32 VIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-------HNYYGPSEGLPELREAIVKREKRKNGV-D-------------   90 (398)
T ss_pred             eEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHHhcCC-C-------------
Confidence            3556667773  2235677888887766532       123445668999999999988764221 1             


Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE-ecC-
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI-RLT-  255 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v-p~~-  255 (435)
                                  .++ +++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|.+++.+ +.+ 
T Consensus        91 ------------~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~  149 (398)
T PRK08363         91 ------------ITP-DDVRVTAAVTEALQLIFGALLDPGDE--------ILIPGPSYPPYTGLVKFYGGVPVEYRTIEE  149 (398)
T ss_pred             ------------CCh-hhEEEeCCHHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHHcCCEEEEeccccc
Confidence                        233 38999999999999999999877776        9999999999999999999998888 555 


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      +++.+|+++++++++++++++++++||||||.+   +++++|.++|+++|+++|+|++|+.+.+.     +.......+.
T Consensus       150 ~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~-----~~~~~~~~~~  224 (398)
T PRK08363        150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYE-----GKHVSPGSLT  224 (398)
T ss_pred             cCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC-----CcccCHHHcC
Confidence            456789999999998899999999999999998   45999999999999999999999876541     1000011111


Q ss_pred             CCCccEEEecCCCC-CCccCCcEEEEE
Q psy10210        333 LPGVTSISVDTHKY-GFTPKGSSVVLY  358 (435)
Q Consensus       333 ~~gvd~~~~s~hK~-~~~p~g~g~il~  358 (435)
                      ...-.+++.|++|. +.++.++|+++.
T Consensus       225 ~~~~vi~~~SfSK~~~~~GlRiG~~~~  251 (398)
T PRK08363        225 KDVPVIVMNGLSKVYFATGWRLGYIYF  251 (398)
T ss_pred             cCCcEEEEecchhccCCccceEEEEEE
Confidence            11124556789998 555678999777

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.87  E-value=4.8e-21  Score=189.22  Aligned_cols=171  Identities=16%  Similarity=0.180  Sum_probs=140.5

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchh-HHHHHHHcCCE
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPA-FDKAANYFGMK  248 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~-~~~~~~~~g~~  248 (435)
                      ...++..++++.+++++|++++. ++++++|||+++..++.++..+++.        +++.+ +.|.. +...++..|++
T Consensus        28 ~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~--------vi~~~~~~~~~~~~~~a~~~g~~   99 (355)
T TIGR03301        28 EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGK--------LLVLINGAYGERLAKICEYLGIP   99 (355)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCe--------EEEECCCchhhHHHHHHHHcCCc
Confidence            34577889999999999998653 5788999999999999998755544        55554 45544 56778889999


Q ss_pred             EEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      ++.++.++++.+|++++++++.+  +++++++++++||+|.+.++++|.++|++||+++++|++++.+.           
T Consensus       100 ~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~-----------  168 (355)
T TIGR03301       100 HTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA-----------  168 (355)
T ss_pred             eEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC-----------
Confidence            99999887788999999999874  45678889999999999999999999999999999999875321           


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      .++++...++|+++.++||++++|.|+|+++++++
T Consensus       169 ~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~  203 (355)
T TIGR03301       169 IPIDIEELDVDALIASANKCLEGVPGFGFVIARRD  203 (355)
T ss_pred             cccchhhcCccEEEecCCcccccCCceeEEEECHH
Confidence            25566667899999999999778899999777654

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.87  E-value=2.2e-20  Score=185.76  Aligned_cols=168  Identities=21%  Similarity=0.219  Sum_probs=137.0

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ...++++.+|+++|.++   +.+++|+++++..++.++.++++.        |+++.+.|++....++..|++++.+|.+
T Consensus        52 ~~~~~~e~lA~~~g~~~---~~i~~g~~~a~~~~~~~l~~~gd~--------Vl~~~~~h~s~~~~~~~~g~~~~~~~~~  120 (370)
T TIGR02539        52 PIHDFLEDLAEFLGMDE---ARVTHGAREGKFAVMHALCKEGDW--------VVLDGLAHYTSYVAAERAGLNVKEVPHT  120 (370)
T ss_pred             HHHHHHHHHHHHhCCCc---eEEECChHHHHHHHHHHhhCCCCE--------EEECCcccHHHHHHHHHcCCEEEEEecC
Confidence            34455667889998863   567899999999999999876665        9999999999888899999999999986


Q ss_pred             --CCccccHHHHHHHhhc-------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        256 --SSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       256 --~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                        +++.+|++++++++++       ++++|++++|+||+|.+.++++|.++|++||+++++|++|+.+..          
T Consensus       121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~----------  190 (370)
T TIGR02539       121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRM----------  190 (370)
T ss_pred             CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCc----------
Confidence              3578999999999863       678999999999999999999999999999999999999975432          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                       +.+....++|+++.++||++.++.++|+++.+ +++.+.
T Consensus       191 -~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~-~~~i~~  228 (370)
T TIGR02539       191 -PVSAKEIGADFIVGSGHKSMAASGPCGVLGMS-EEWEDI  228 (370)
T ss_pred             -CCCHHHcCCCEEEeeCcccccCCCCEEEEEEC-HHHHhh
Confidence             23333446899999999996555667886554 555444

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.87  E-value=1.4e-20  Score=188.59  Aligned_cols=219  Identities=19%  Similarity=0.182  Sum_probs=160.6

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+. .+++.+.+.+.+.....       ...|.+..|.+++++++++++......+                
T Consensus        32 ~i~l~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~----------------   87 (391)
T PRK07309         32 ILKLTLGEPDF-TTPDHVKEAAKRAIDAN-------QSHYTGMAGLLELRQAAADFVKEKYNLD----------------   87 (391)
T ss_pred             eEEcCCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence            35566666765 33556777777665432       1235566688999999999887542221                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-Cc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SY  258 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~  258 (435)
                                ..+++++++|+|+++++.+++.++..+++.        |++++|+|..+...++..|++++.+|+++ ++
T Consensus        88 ----------~~~~~~i~it~G~~~al~~~~~~~~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  149 (391)
T PRK07309         88 ----------YAPENEILVTIGATEALSASLTAILEPGDK--------VLLPAPAYPGYEPIVNLVGAEIVEIDTTENDF  149 (391)
T ss_pred             ----------CCCCCcEEEeCChHHHHHHHHHHhcCCCCE--------EEEeCCCCcchHHHHHHcCCEEEEEecCCcCC
Confidence                      123348999999999999999998777766        99999999999999999999999999874 46


Q ss_pred             cccHHHHHHHhhc---CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITG---NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       259 ~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      .+|++++++++++   +++++++++|+||||.+   +++++|.++|++||+++|+|++|+.+...     +....+..-.
T Consensus       150 ~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~-----~~~~~~~~~~  224 (391)
T PRK07309        150 VLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYT-----GEPHVSIAEY  224 (391)
T ss_pred             cCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeC-----CCCCCCHHHh
Confidence            7999999999864   68999999999999997   56999999999999999999999987641     1111111101


Q ss_pred             CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        333 LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ...-.++..|++|... ....+|+++. ++++.+.
T Consensus       225 ~~~~~i~~~S~SK~~g~~GlRvG~~v~-~~~~~~~  258 (391)
T PRK07309        225 LPDQTILINGLSKSHAMTGWRIGLIFA-PAEFTAQ  258 (391)
T ss_pred             ccCCEEEEecChhhccCccceeEEEEe-CHHHHHH
Confidence            1233567778999842 3355899554 4555443

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.87  E-value=1.2e-20  Score=182.72  Aligned_cols=243  Identities=14%  Similarity=0.094  Sum_probs=199.5

Q ss_pred             CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHH
Q psy10210        167 PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANY  244 (435)
Q Consensus       167 ~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~  244 (435)
                      .+..|.+.++..++.+.+...|+....+..+++++||.+++.++.++..++++        |++.....++  +.+.+++
T Consensus        30 ~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdk--------VLv~~nG~FG~R~~~ia~~  101 (383)
T COG0075          30 GHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDK--------VLVVVNGKFGERFAEIAER  101 (383)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCe--------EEEEeCChHHHHHHHHHHH
Confidence            36678899999999999999999886567889999999999999999998887        8888877766  7899999


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      +|++++.+..+..-.+|++++++++++  +.++|.++|..++||...|+++|+++|++||..++||++-+          
T Consensus       102 ~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS----------  171 (383)
T COG0075         102 YGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS----------  171 (383)
T ss_pred             hCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc----------
Confidence            999999999887778999999999984  46899999999999999999999999999999999999964          


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC------CCC-CccccCCCchHHHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN------YGS-PSVSGSRSGGIIAT  395 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~------~~~-~~~~gsr~~~~ia~  395 (435)
                       ++..+++...+|+|++..+++|++.+|+|.|++.++++.+........+.|.-..      +.. .....+.+...+.+
T Consensus       172 -~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~a  250 (383)
T COG0075         172 -LGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYA  250 (383)
T ss_pred             -CCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHH
Confidence             3445889999999999999999999999999999998765332111111111000      001 23345666677888


Q ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        396 CWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       396 ~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ...+++.+-++|+.++.+++.+......+.+..
T Consensus       251 L~~al~~i~~EGle~r~~RH~~~~~a~r~~~~a  283 (383)
T COG0075         251 LREALDLILEEGLEARIARHRRLAEALRAGLEA  283 (383)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999998887777776653

>PRK07550 hypothetical protein; Provisional

Probab=99.87  E-value=2.8e-20  Score=186.15  Aligned_cols=215  Identities=16%  Similarity=0.089  Sum_probs=159.8

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|.. .++..+.+.+.+.....      ....|....|.+++++++++.+......+                
T Consensus        31 ~i~l~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~----------------   87 (386)
T PRK07550         31 LIDLSQAVPGY-PPPPELLRALAEAAADP------AAHLYGPVEGLPELREAYAAHYSRLYGAA----------------   87 (386)
T ss_pred             eEEeCCCCCCC-CCCHHHHHHHHHHHhCc------CCcCCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence            35566666665 34667777777765421      12345566789999999999887643321                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~  257 (435)
                                ..+ +++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|++++.+|++  .+
T Consensus        88 ----------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  148 (386)
T PRK07550         88 ----------ISP-EQVHITSGCNQAFWAAMVTLAGAGDE--------VILPLPWYFNHKMWLDMLGIRPVYLPCDEGPG  148 (386)
T ss_pred             ----------CCc-ceEEEecCcHHHHHHHHHHhcCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEEecCCCcC
Confidence                      123 48999999999999999999877776        9999999999999999999999999997  35


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +.+|++++++++++++++|++++||||||.+   +++++|.++|++||+++|+|++|+.|...    .+.....+.....
T Consensus       149 ~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~----~~~~~~~~~~~~~  224 (386)
T PRK07550        149 LLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSG----GGAPHDLFADPDW  224 (386)
T ss_pred             CCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccC----CCCCcchhhCCCc
Confidence            6689999999999899999999999999998   45899999999999999999999877431    0111111211111


Q ss_pred             C-ccEEEecCCCCCC-ccCCcEEEEEeC
Q psy10210        335 G-VTSISVDTHKYGF-TPKGSSVVLYRD  360 (435)
Q Consensus       335 g-vd~~~~s~hK~~~-~p~g~g~il~~~  360 (435)
                      + -.+...|++|..+ +..++|+++..+
T Consensus       225 ~~~~i~~~S~SK~~g~~G~RiG~i~~~~  252 (386)
T PRK07550        225 DDTLVHLYSFSKSYALTGHRVGAVVASP  252 (386)
T ss_pred             cccEEEEecchhhccCcccceEeeecCH
Confidence            2 2455778999743 345689966644

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.87  E-value=1.6e-20  Score=188.79  Aligned_cols=216  Identities=14%  Similarity=0.081  Sum_probs=159.4

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|..+. ++.+.+.+.+.+...       ...|....|.+++++++++.+.++....                 
T Consensus        36 i~l~~g~p~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-----------------   90 (402)
T PRK06107         36 VDLTVGEPDFDT-PDHIKQAAVAAIERG-------ETKYTLVNGTPALRKAIIAKLERRNGLH-----------------   90 (402)
T ss_pred             EEcCCCCCCCCC-CHHHHHHHHHHHHcC-------CCCCCCCCCCHHHHHHHHHHHHHhcCCC-----------------
Confidence            456667777644 455777777766532       2456677899999999999887643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~  258 (435)
                               ..+ +++++|+|+++|+.+++.++.++++.        |++++|+|..+...+...+.+++.++++  +++
T Consensus        91 ---------~~~-~~i~~t~G~~~al~~~~~~~~~~gd~--------vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~  152 (402)
T PRK06107         91 ---------YAD-NEITVGGGAKQAIFLALMATLEAGDE--------VIIPAPYWVSYPDMVLANDGTPVIVACPEEQGF  152 (402)
T ss_pred             ---------CCh-hhEEEeCCHHHHHHHHHHHhcCCCCE--------EEEecCCCcCHHHHHHHcCCEEEEecCCcccCC
Confidence                     123 38999999999999999988777776        9999999999998888889998888885  346


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCC---C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFD---F  331 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d---~  331 (435)
                      .+|++++++++.++++++++++|+||||.+   +++++|+++|++| ++++|+|++|+.+.+.     +.+.+.+.   .
T Consensus       153 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~-----~~~~~~~~~~~~  227 (402)
T PRK06107        153 KLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFD-----DEPTPHLLAAAP  227 (402)
T ss_pred             CCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccC-----CCCCCCHHHhCc
Confidence            789999999998889999999999999988   5688899999998 9999999999876431     11111111   1


Q ss_pred             CCCCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        332 SLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ...+-.+...|++|... ....+|+++ .++++.+
T Consensus       228 ~~~~~vi~~~S~SK~~~~pGlRiG~~~-~~~~~~~  261 (402)
T PRK06107        228 ELRDRVLVTNGVSKTYAMTGWRIGYAA-GPADLIA  261 (402)
T ss_pred             CccCCEEEEeccchhhcCcccceeeee-cCHHHHH
Confidence            11123455667899842 235579955 4555544

>PRK07683 aminotransferase A; Validated

Probab=99.87  E-value=2.3e-20  Score=186.82  Aligned_cols=218  Identities=17%  Similarity=0.143  Sum_probs=162.6

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|.. ..++.+.+.+.+.+...       ...|....|.+++++++++++......+                 
T Consensus        31 i~l~~~~p~~-~~~~~~~~a~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~-----------------   85 (387)
T PRK07683         31 ISLTIGQPDF-PTPSHVKEAAKRAITEN-------YTSYTHNAGLLELRKAACNFVKDKYDLH-----------------   85 (387)
T ss_pred             EEecCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            4556666764 33567777777766532       2345566789999999999887542211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCcc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYT  259 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~  259 (435)
                               .+++.++++|+|+++|+.+++.++.++++.        |++++|+|+.+...++..|++++.+|++ +++.
T Consensus        86 ---------~~~~~~I~~t~G~~~al~~~~~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  148 (387)
T PRK07683         86 ---------YSPESEIIVTIGASEAIDIAFRTILEPGTE--------VILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFR  148 (387)
T ss_pred             ---------CCCCCcEEEeCChHHHHHHHHHHhCCCCCE--------EEEcCCCccchHHHHHHcCCEEEEeecCcccCC
Confidence                     123237999999999999999998776666        9999999999999999999999999987 4567


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCC
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPG  335 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~g  335 (435)
                      +|.+++++.++++++++++++|+||||.+   +++++|.++|+++|+++|+|++|+.+.+.  +.   ..+...+ ...+
T Consensus       149 ~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~---~~~~~~~~~~~~  223 (387)
T PRK07683        149 LTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYE--QP---HTSIAHFPEMRE  223 (387)
T ss_pred             CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeC--CC---cCChhhccCCcC
Confidence            78999999998899999999999999998   56999999999999999999999987541  11   1111122 1223


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      -.++..|+.|..+ +...+|+++. ++++.+.
T Consensus       224 ~vi~~~s~SK~~~~pGlRiG~i~~-~~~l~~~  254 (387)
T PRK07683        224 KTIVINGLSKSHSMTGWRIGFLFA-PSYLAKH  254 (387)
T ss_pred             CeEEEeeccccccCccceeEEEEc-CHHHHHH
Confidence            4567788999854 3466899654 4454443

>PRK09148 aminotransferase; Validated

Probab=99.87  E-value=2.4e-20  Score=187.66  Aligned_cols=218  Identities=12%  Similarity=0.054  Sum_probs=155.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|+.+. +..+++.+.+.+...      ....|....|.+++++++++++......+                 
T Consensus        33 i~l~~~~p~~~~-~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-----------------   88 (405)
T PRK09148         33 IDLGMGNPDLPT-PQHIVDKLCETAQDP------RTHRYSASKGIPGLRRAQAAYYARRFGVK-----------------   88 (405)
T ss_pred             EEcCCCCCCCCC-CHHHHHHHHHHHcCc------ccCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            455666776544 567777777665421      13456666789999999999997643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC--c
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS--Y  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~--~  258 (435)
                               .+++.++++|+|+++++.+++.+++++++.        |++++|+|+.+...+...|++++.+|++.+  +
T Consensus        89 ---------~~~~~~I~it~G~~~al~~~~~~l~~~gd~--------Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~  151 (405)
T PRK09148         89 ---------LNPDTQVVATLGSKEGFANMAQAITAPGDV--------ILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF  151 (405)
T ss_pred             ---------CCCCCcEEEcCChHHHHHHHHHHhcCCCCE--------EEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC
Confidence                     123337999999999999999999888777        999999999999999999999999998743  3


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~  333 (435)
                      ..++++..+...++++++++++||||||.+   +.+++|.++|++||+++++|++|+.+.+.  +   ...+.+ .+. .
T Consensus       152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~--~---~~~~s~~~~~~~  226 (405)
T PRK09148        152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFD--G---NPPPSVLQVPGA  226 (405)
T ss_pred             ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcC--C---CCCCChhhCCCc
Confidence            334444333334678999999999999999   45688999999999999999999987641  1   111111 111 1


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .+..+...|++|... ....+|+++ .++++.+
T Consensus       227 ~~~~i~~~SfSK~~~~pGlR~G~~v-~~~~~i~  258 (405)
T PRK09148        227 KDVTVEFTSMSKTFSMAGWRMGFAV-GNERLIA  258 (405)
T ss_pred             cCcEEEEeccccccCCcchheeeee-CCHHHHH
Confidence            234556788999843 335689965 5555544

>PRK06855 aminotransferase; Validated

Probab=99.87  E-value=2.6e-20  Score=188.83  Aligned_cols=210  Identities=12%  Similarity=0.053  Sum_probs=153.9

Q ss_pred             cccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        103 YFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       103 ~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +..+.|.  ...+|..+.+.+.+.+..      ...+.|.+..|.+++|+++++++.+....+                 
T Consensus        37 ~~~G~p~~~~~~~p~~~~~a~~~~~~~------~~~~~Y~~~~G~~~LReaia~~~~~~~g~~-----------------   93 (433)
T PRK06855         37 ENIGDPIAKGEKIPDWMKEIVAELVMD------DKSYGYCPTKGVLETREFLAELNNKRGGAQ-----------------   93 (433)
T ss_pred             cccCCCcccCCCCCHHHHHHHHHHhhc------CCCCCCCCCCCCHHHHHHHHHHHHhccCCC-----------------
Confidence            3445562  225566777777776543      134567778899999999999997753221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH-HHcCCEEEEEecC--CC
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA-NYFGMKVKHIRLT--SS  257 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~-~~~g~~v~~vp~~--~~  257 (435)
                               .++ +++++|+|+++++.+++. +.++++.        |++++|+|+.+.... ...|++++.+|++  ++
T Consensus        94 ---------~~~-~~I~it~G~~~al~~~~~-l~~~Gd~--------Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~  154 (433)
T PRK06855         94 ---------ITP-DDIIFFNGLGDAIAKIYG-LLRREAR--------VIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENN  154 (433)
T ss_pred             ---------CCH-hHEEEcCcHHHHHHHHHH-hcCCCCe--------EEEeCCCCchHHHHHHHhcCCeEEEEecccccC
Confidence                     233 389999999999999985 6666666        999999999977553 4558899999986  34


Q ss_pred             ccccHHHHHHHhh--cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210        258 YTVDLAALQSAIT--GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF  331 (435)
Q Consensus       258 ~~~d~~~l~~~i~--~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~  331 (435)
                      +.+|++++++++.  ++++++++++|+||||.+   +.+++|+++|++||++||+|++|+.+.+.     +...+++ .+
T Consensus       155 ~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~-----~~~~~sl~~~  229 (433)
T PRK06855        155 WYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYN-----GKKTVPLSEV  229 (433)
T ss_pred             CCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-----CCCCCCHHHH
Confidence            6789999999986  467899999999999999   67889999999999999999999988642     1111121 11


Q ss_pred             CCCCccEEEecCCCCCC-ccCCcEEEEEe
Q psy10210        332 SLPGVTSISVDTHKYGF-TPKGSSVVLYR  359 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~-~p~g~g~il~~  359 (435)
                      ...+..+...|+.|... ....+|+++..
T Consensus       230 ~~~~~~I~~~S~SK~~~~pGlRiG~ii~p  258 (433)
T PRK06855        230 IGDVPGIALKGISKELPWPGSRCGWIEVY  258 (433)
T ss_pred             cCcCCeEEEecCccccCCCcceEEEEEEe
Confidence            11122466778999853 44778998763

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.87  E-value=9.2e-21  Score=192.31  Aligned_cols=255  Identities=11%  Similarity=0.001  Sum_probs=171.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCH
Q psy10210         35 SVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNR  114 (435)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~  114 (435)
                      +.-.+...|+.|.++|+|..++..+.+++....         ......    .       ........+..+.|+....|
T Consensus        42 sr~tv~~a~~~L~~~g~i~~~~~~G~~v~~~~~---------~~~~~~----~-------~~~~~~i~L~~g~p~~~~~p  101 (431)
T PRK15481         42 NRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPS---------PVALEG----G-------DPGTPLHDLAGGNPDPQRLP  101 (431)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCCCceEEccCcc---------hhhhcc----c-------CCcchhhhhhcCCCChhHhH
Confidence            334456678888888888776655555432110         000000    0       00001123444555543323


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC
Q psy10210        115 LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET  194 (435)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~  194 (435)
                       .+.+.+.+....        ...|....|.+++++++++++....                              .+++
T Consensus       102 -~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~------------------------------~~~~  142 (431)
T PRK15481        102 -DLSRYFARLSRT--------PRLYGDAPVSPELHAWAARWLRDDC------------------------------PVAF  142 (431)
T ss_pred             -HHHHHHHHhhhh--------hhhcCCcCCCHHHHHHHHHHHhhcc------------------------------CCcC
Confidence             344444443221        1235555677788888877765421                              1223


Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV  274 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~  274 (435)
                      ++++|+|+++++.+++.++.+++|.        |++++|+|+.+...++..|++++.+|+++++ +|+++++++++++++
T Consensus       143 ~Iiit~G~~~al~~~~~~l~~pgd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~~~k  213 (431)
T PRK15481        143 EIDLTSGAIDAIERLLCAHLLPGDS--------VAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALAQGAR  213 (431)
T ss_pred             eEEEecCcHHHHHHHHHHhCCCCCE--------EEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHhcCCC
Confidence            8999999999999999999888877        9999999999999999999999999997655 899999999988888


Q ss_pred             EEEEe-CCCCCccccc---CHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCc
Q psy10210        275 MLVGS-MPNFPYGTMD---DIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFT  349 (435)
Q Consensus       275 ~v~~~-~p~nptG~~~---~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~  349 (435)
                      +++++ +||||||.+-   .+++|.++|++| +++|++|++|+.+...     +. .+.+.. ...-.++..|++|...+
T Consensus       214 ~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~-----~~-~~~~~~-~~~~vi~~~SfSK~~~~  286 (431)
T PRK15481        214 AVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSS-----PY-HSVIPQ-TTQRWALIRSVSKALGP  286 (431)
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccC-----CC-CCCCcC-CCCCEEEEeeeccccCC
Confidence            88887 9999999994   456999999999 9999999999988531     11 111221 11234667789998544


Q ss_pred             cCCcEEEEEeCCcccc
Q psy10210        350 PKGSSVVLYRDLKYKH  365 (435)
Q Consensus       350 p~g~g~il~~~~~~~~  365 (435)
                      ...+|+++ .++++..
T Consensus       287 GlRiG~~i-~~~~~~~  301 (431)
T PRK15481        287 DLRLAFVA-SDSATSA  301 (431)
T ss_pred             CceeEEEe-CCHHHHH
Confidence            46679855 4555543

>KOG0259|consensus

Probab=99.86  E-value=2.4e-20  Score=174.87  Aligned_cols=204  Identities=24%  Similarity=0.274  Sum_probs=159.0

Q ss_pred             CHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC
Q psy10210        113 NRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP  192 (435)
Q Consensus       113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~  192 (435)
                      +..+..+++.+.+..+      ..-+|++..|.+.-|+++++.+.+.. .+.+                         .+
T Consensus        79 ts~~a~~Av~~al~Sg------k~N~Yaps~G~~~AR~AVAeYl~~~l-~~kl-------------------------~a  126 (447)
T KOG0259|consen   79 TSQEAEQAVVDALRSG------KGNGYAPSVGILPARRAVAEYLNRDL-PNKL-------------------------TA  126 (447)
T ss_pred             CCHHHHHHHHHHHhcC------CCCCcCCccccHHHHHHHHHHhhcCC-CCcc-------------------------Cc
Confidence            3455666666666643      24456777799999999999865421 2222                         22


Q ss_pred             CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec--CCCccccHHHHHHHhh
Q psy10210        193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL--TSSYTVDLAALQSAIT  270 (435)
Q Consensus       193 ~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~--~~~~~~d~~~l~~~i~  270 (435)
                       +++++|+|.++|+.+++.++.+++..        |++|.|.|+-|...+.+.|++++.+..  +++|++|++.+|.+++
T Consensus       127 -~DV~ltsGC~qAIe~~i~~LA~p~aN--------ILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D  197 (447)
T KOG0259|consen  127 -DDVVLTSGCSQAIELAISSLANPGAN--------ILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD  197 (447)
T ss_pred             -CceEEeccchHHHHHHHHHhcCCCCc--------eecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc
Confidence             38999999999999999999888776        999999999999999999999999986  3789999999999999


Q ss_pred             cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe-cCCCC
Q psy10210        271 GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV-DTHKY  346 (435)
Q Consensus       271 ~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~-s~hK~  346 (435)
                      +||.++++.+|+||.|.+   +.+++|+++|+++++++|.||+|+.+++.     +-+..|..--..-|-++++ +..|-
T Consensus       198 ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg-----~~pfvpmg~fssiVPVitlggisKr  272 (447)
T KOG0259|consen  198 ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFG-----DKPFVPMGKFSSIVPVITLGGISKR  272 (447)
T ss_pred             cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecC-----CCCccchhhccccCceEeecccccc
Confidence            999999999999999999   78999999999999999999999998873     1111122111122445555 46663


Q ss_pred             CCcc-CCcEEEEEeCCc
Q psy10210        347 GFTP-KGSSVVLYRDLK  362 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~  362 (435)
                      ...| -.+||++..|+.
T Consensus       273 W~VPGWRlGWi~~hD~~  289 (447)
T KOG0259|consen  273 WIVPGWRLGWIALHDPR  289 (447)
T ss_pred             cccCCceeeeEEEeccc
Confidence            2444 578999988875

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.86  E-value=1.2e-19  Score=182.46  Aligned_cols=216  Identities=21%  Similarity=0.229  Sum_probs=161.3

Q ss_pred             CCccccCCCC---CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        100 GLEYFLELPS---QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       100 ~~~~~~~~P~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      ...+..+.|.   .-.+++++.+.+.+.+....      ...|....|.+++++++++.+...... .            
T Consensus        33 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~------------   93 (403)
T TIGR01265        33 IIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGK------FNGYAPSVGALAAREAVAEYLSSDLPG-K------------   93 (403)
T ss_pred             eEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHHhhcCC-C------------
Confidence            4555666664   23556778888887765321      124556678899999999888753211 1            


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                                   .++ +++++|+|+|+|+.+++.++.++++.        |++++|+|..+...++..|++++.++++ 
T Consensus        94 -------------~~~-~~ii~t~G~t~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~  151 (403)
T TIGR01265        94 -------------LTA-DDVVLTSGCSQAIEICIEALANPGAN--------ILVPRPGFPLYDTRAAFSGLEVRLYDLLP  151 (403)
T ss_pred             -------------CCH-HHEEEecChHHHHHHHHHHhCCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEecCCc
Confidence                         122 37999999999999999998766665        9999999999999999999999999875 


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-C
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D  330 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d  330 (435)
                       +++.+|+++++++++++++++++++|+||||.+   +++++|.++|+++|+++|+|++|+.+.+.     +....++ .
T Consensus       152 ~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~  226 (403)
T TIGR01265       152 EKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFG-----DAPFIPMAS  226 (403)
T ss_pred             ccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC-----CCCccchhh
Confidence             457899999999998899999999999999999   46999999999999999999999988642     1111111 1


Q ss_pred             CCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210        331 FSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL  361 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~  361 (435)
                      +....-.+++.|+.|. +.....+|+++..++
T Consensus       227 ~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~  258 (403)
T TIGR01265       227 FASIVPVLSLGGISKRWVVPGWRLGWIIIHDP  258 (403)
T ss_pred             hccCCcEEEEeecccccCCCcceEEEEEEeCc
Confidence            1111113556689997 444577899877654

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.86  E-value=3e-20  Score=183.12  Aligned_cols=258  Identities=14%  Similarity=0.082  Sum_probs=173.2

Q ss_pred             cccccCC---hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        138 SGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       138 ~~~~~~g---~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      ++..|-|   +|++.+++.+.+..+.. +........+......++++.+++++|.+   ..+++++|++++..++.++.
T Consensus         7 ~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~~iv~~sg~~a~~~~~~~~~   82 (349)
T cd06454           7 CSNDYLGLANHPEVIEAAKEALDKYGV-GAGGSRLISGTSDLHEELEEELAEFHGKE---AALVFSSGYAANDGVLSTLA   82 (349)
T ss_pred             ccCCccccCCCHHHHHHHHHHHHHhCC-CCCCcCeecCCchHHHHHHHHHHHHhCCC---CEEEeccHHHHHHHHHHHhc
Confidence            3344444   68899999988876422 11111122345666778888899999874   34666777899998888887


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-----CceEEEEeCCCCCccccc
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-----NTVMLVGSMPNFPYGTMD  289 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-----~~~~v~~~~p~nptG~~~  289 (435)
                      ++++.        |++++++|+++...++..|++++.++.     +|.+++++++++     +++++++++++||+|...
T Consensus        83 ~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~  149 (349)
T cd06454          83 GKGDL--------IISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA  149 (349)
T ss_pred             CCCCE--------EEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc
Confidence            66665        999999999999999999999988763     477788888764     578899999999999999


Q ss_pred             CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210        290 DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF  369 (435)
Q Consensus       290 ~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~  369 (435)
                      ++++|.++|+++|+++|+|++|+.+....   .+.....++....+.|+++.|+||+ +++.| |+++ .++++.+....
T Consensus       150 ~~~~i~~~~~~~~~~livD~a~~~g~~~~---~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~g-G~i~-~~~~~~~~~~~  223 (349)
T cd06454         150 PLPELVDLAKKYGAILFVDEAHSVGVYGP---HGRGVEEFGGLTDDVDIIMGTLGKA-FGAVG-GYIA-GSKELIDYLRS  223 (349)
T ss_pred             CHHHHHHHHHHcCCEEEEEccccccccCC---CCCChhhhccccccCcEEEeechhh-hcccC-CEEE-CCHHHHHHHHH
Confidence            99999999999999999999997443321   0111112333445789999999998 45555 6644 45555433211


Q ss_pred             ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ....+.        ..++.+...++++.++++.+.. +...+++++..+.+.+.++++
T Consensus       224 ~~~~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~  273 (349)
T cd06454         224 YARGFI--------FSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL  273 (349)
T ss_pred             hchhhh--------ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence            111111        1123333344556666666533 445666666666666666554

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.86  E-value=3.2e-20  Score=186.17  Aligned_cols=222  Identities=16%  Similarity=0.181  Sum_probs=162.4

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|..+ +++.+.+.+.+... .       ...|....|.+++++++++++......+.               
T Consensus        30 ~i~l~~~~p~~~-~~~~~~~a~~~~~~-~-------~~~Y~~~~G~~~lr~aia~~~~~~~~~~~---------------   85 (393)
T TIGR03538        30 PIALSIGEPKHP-TPAFVLEALRENLH-G-------LSTYPTTKGLPELRQAIARWLERRFDLPT---------------   85 (393)
T ss_pred             eEEecCCCCCCC-CCHHHHHHHHHHhh-c-------cCCCCCCCCCHHHHHHHHHHHHHhhCCcc---------------
Confidence            345566667763 45677777776543 1       23455677899999999999876432210               


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~  257 (435)
                               |.++++++++|+|+++++.+++.++.++++.      ..|++++|+|+.+...++..|++++.+|+++  +
T Consensus        86 ---------~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~------~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  150 (393)
T TIGR03538        86 ---------GVDPERHVLPVNGTREALFAFAQAVINPGQA------PLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENG  150 (393)
T ss_pred             ---------cCCCCceEEECCCcHHHHHHHHHHHcCCCCc------ceEEecCCCCcchHHHHHhcCCeEEEeeccccCC
Confidence                     0133337999999999999999999877753      2389999999999999999999999999963  3


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC--CCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF--DFS  332 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~--d~~  332 (435)
                      +.+|++++++++.++++++++++||||||.+   +.+++|+++|++|+++|++|++|..+...  +  +...++.  ...
T Consensus       151 ~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~--~--~~~~~~~~~~~~  226 (393)
T TIGR03538       151 FLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFD--E--GNPPAGLLQAAA  226 (393)
T ss_pred             CCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccC--C--CCCCcCHHHhcc
Confidence            6789999999988889999999999999999   56899999999999999999999877541  0  0000010  000


Q ss_pred             -----CCCccEEEecCCC-CCCccCCcEEEEEeCCcccc
Q psy10210        333 -----LPGVTSISVDTHK-YGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       333 -----~~gvd~~~~s~hK-~~~~p~g~g~il~~~~~~~~  365 (435)
                           ...-.+++.|+.| ++.+...+|+++. ++++.+
T Consensus       227 ~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~-~~~l~~  264 (393)
T TIGR03538       227 QLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG-DAEILK  264 (393)
T ss_pred             cccccccccEEEEecchhhcCCcccceEEEec-CHHHHH
Confidence                 1112467778999 5666678999654 455443

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.86  E-value=1e-19  Score=192.51  Aligned_cols=300  Identities=16%  Similarity=0.140  Sum_probs=204.4

Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCCCcccccc-cCChHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHh
Q psy10210        111 GRNRLEILELVSNYLARGHYDWKHGRVSGAV-YYYQQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMF  188 (435)
Q Consensus       111 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~  188 (435)
                      ..++.++++.+.+..+++..--....+-|+. ..-.+.. ..+-.....|...+|++| +..++..++..++.+++++++
T Consensus       478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~-~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLt  556 (954)
T PRK12566        478 HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATS-EMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAIT  556 (954)
T ss_pred             CCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHH-hhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence            3688999999999877653211111111110 0001111 111113344455589999 889999999999999999999


Q ss_pred             CCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHH
Q psy10210        189 NGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ  266 (435)
Q Consensus       189 g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~  266 (435)
                      |.+..   .+. .+|+.+...++.+++.+... +|. .+.+|+++...|.+....+...|++++.+|++++|.+|+++|+
T Consensus       557 Gmd~~---Sl~p~sGA~gE~A~Lmair~yh~~-~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~  632 (954)
T PRK12566        557 GFDAI---CMQPNSGAQGEYAGLLAIRRYHRS-RGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLK  632 (954)
T ss_pred             CCCeE---eecCCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHH
Confidence            99743   444 47788888888888765544 554 3678999999997777778889999999999988999999999


Q ss_pred             HHhh---cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCCCCccEEEec
Q psy10210        267 SAIT---GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGVTSISVD  342 (435)
Q Consensus       267 ~~i~---~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gvd~~~~s  342 (435)
                      ++++   +++++|++++|++-.+..+++++|.++|+++|+++++|.++.-...           .++ ....|+|++.++
T Consensus       633 a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~-----------~l~~Pg~~GADi~~~s  701 (954)
T PRK12566        633 AKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV-----------GLARPADIGADVSHMN  701 (954)
T ss_pred             HHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc-----------CCCChhhcCCCEEEec
Confidence            9997   6889999999998555557799999999999999999999852211           233 356799999999


Q ss_pred             CCCCCCccCCcEEEEEeCCccccccccccCCCCC----CC---CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210        343 THKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG----GN---YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY  415 (435)
Q Consensus       343 ~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g----g~---~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~  415 (435)
                      +|||+++|.|.|...++.=...+....+.+.|++    |.   .++.+-.++-.+..+..+|..++.+|.+ +.+.....
T Consensus       702 ~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~a  780 (954)
T PRK12566        702 LHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVA  780 (954)
T ss_pred             CCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHH
Confidence            9999888887766554441222221123344432    11   1112222333334456888889999998 66666545


Q ss_pred             HHHHHHHHHhcC
Q psy10210        416 HFNYKSCLQNLS  427 (435)
Q Consensus       416 ~~~~~~~~~~l~  427 (435)
                      ..++.++.++|.
T Consensus       781 ilnAnYla~rL~  792 (954)
T PRK12566        781 ILSANYLANQLG  792 (954)
T ss_pred             HHHHHHHHHHhH
Confidence            555555555553

>PRK09265 aminotransferase AlaT; Validated

Probab=99.86  E-value=4.6e-20  Score=185.69  Aligned_cols=211  Identities=18%  Similarity=0.144  Sum_probs=155.9

Q ss_pred             CccccCCCCC-C-CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210        101 LEYFLELPSQ-G-RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus       101 ~~~~~~~P~~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      ..+..+.|.. + .++.++.+.+.+....        ...|....|.+++++++++++......                
T Consensus        36 i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--------~~~Y~~~~G~~~lr~~ia~~~~~~~~~----------------   91 (404)
T PRK09265         36 LKLNIGNPAPFGFEAPDEILRDVIRNLPT--------AQGYSDSKGLFSARKAIMQYYQQKGIP----------------   91 (404)
T ss_pred             EEecCCCCCcCCCCCCHHHHHHHHHHhhc--------CCCCCCCCCcHHHHHHHHHHHhccCCC----------------
Confidence            4455555532 1 3567788877765431        234566778899999999988643211                


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--C
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--S  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~  256 (435)
                                +.++ +++++|+|+++++.+++.++.++++.        |++++|+|..+..+++..|.+++.++++  .
T Consensus        92 ----------~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~  152 (404)
T PRK09265         92 ----------DVDV-DDIYIGNGVSELIVMAMQALLNNGDE--------VLVPAPDYPLWTAAVSLSGGKPVHYLCDEEA  152 (404)
T ss_pred             ----------CCCc-ccEEEeCChHHHHHHHHHHhCCCCCE--------EEEeCCCCcChHHHHHHcCCEEEEEeccccc
Confidence                      1233 38999999999999999998777776        9999999999999999999999999876  3


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++.+|++++++++++++++|++++|+||||.+-+   +++|.++|++||+++++|++|+.+.+.     +....++....
T Consensus       153 ~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~  227 (404)
T PRK09265        153 GWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYD-----GAVHISIASLA  227 (404)
T ss_pred             CCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCC-----CCCcCCHHHcC
Confidence            5679999999999889999999999999999855   999999999999999999999987541     11111111111


Q ss_pred             CCccE-EEecCCCCC-CccCCcEEEEEe
Q psy10210        334 PGVTS-ISVDTHKYG-FTPKGSSVVLYR  359 (435)
Q Consensus       334 ~gvd~-~~~s~hK~~-~~p~g~g~il~~  359 (435)
                      ..... ...|+.|.. .+...+|+++..
T Consensus       228 ~~~~vi~~~S~SK~~~~pGlRiG~~v~~  255 (404)
T PRK09265        228 PDLLCVTFNGLSKAYRVAGFRVGWMVLS  255 (404)
T ss_pred             CCceEEEEecchhhccCcccceEEEEEe
Confidence            22233 445678984 344668997764

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.86  E-value=2.8e-20  Score=185.73  Aligned_cols=164  Identities=18%  Similarity=0.205  Sum_probs=127.3

Q ss_pred             HHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C--Cccc
Q psy10210        184 CARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S--SYTV  260 (435)
Q Consensus       184 la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~--~~~~  260 (435)
                      +++++|.+++ ++++|+|+++++.+++.++..+++.        |++++|+|..+...++..|++++.+|++ +  ++.+
T Consensus        75 ia~~l~~~~~-~v~~~~g~t~al~~~~~~~~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~  145 (380)
T PRK06225         75 ILKDLGLDDD-EALITAGATESLYLVMRAFLSPGDN--------AVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKL  145 (380)
T ss_pred             HHHhcCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCE--------EEEcCCCCcchHHHHHHhCceEEeeccccccCCccC
Confidence            3333444554 8999999999999999998766665        9999999999999999999999999974 2  4689


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      |+++++++++++++++++++|+||||.+   +++++|.++|++||+++|+|++|++|...      .  .+.........
T Consensus       146 d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~------~--~~~~~~~~~~~  217 (380)
T PRK06225        146 TPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE------H--TLAAEYAPEHT  217 (380)
T ss_pred             CHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc------C--CchhhcCCCCE
Confidence            9999999999899999999999999997   67999999999999999999999876431      1  11111112345


Q ss_pred             EEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        338 SISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       338 ~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      +...+++|++ ++.|  +|+++.+ +++.+.
T Consensus       218 i~~~s~SK~~-g~~G~RiG~i~~~-~~l~~~  246 (380)
T PRK06225        218 VTSYSFSKIF-GMAGLRIGAVVAT-PDLIEV  246 (380)
T ss_pred             EEEeechhhc-CCccceeEEEecC-HHHHHH
Confidence            6666888985 5444  6996654 455443

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.86  E-value=3e-20  Score=188.44  Aligned_cols=199  Identities=18%  Similarity=0.211  Sum_probs=146.5

Q ss_pred             HHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCc
Q psy10210        116 EILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC  195 (435)
Q Consensus       116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~  195 (435)
                      .+.+.+.+.+..+       ...|+...|.+++++++++.+..                                   ..
T Consensus        58 a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lreaia~~~~~-----------------------------------~~   95 (460)
T PRK13238         58 AMSDRQWAAMMRG-------DEAYAGSRSYYRLEDAVKDIFGY-----------------------------------PY   95 (460)
T ss_pred             hhhHHHHHHHHhC-------CcccCCCCCHHHHHHHHHHHhCC-----------------------------------Cc
Confidence            4666666666543       22455666788888888776642                                   15


Q ss_pred             eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--------C--ccccHHHH
Q psy10210        196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--------S--YTVDLAAL  265 (435)
Q Consensus       196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--------~--~~~d~~~l  265 (435)
                      +++|+||++|+.+++.++.++||         |++++|.|..+...++..|++++.+|+++        .  |.+|++++
T Consensus        96 vv~t~ggt~A~~~~~~all~pGD---------Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~L  166 (460)
T PRK13238         96 TIPTHQGRAAEQILFPVLIKKGD---------VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKL  166 (460)
T ss_pred             EEECCCHHHHHHHHHHHhCCCCC---------EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHH
Confidence            89999999999999999876553         88999999999888999999999999852        2  34999999


Q ss_pred             HHHhhc----CceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccc--cCCCCCCCC-C---
Q psy10210        266 QSAITG----NTVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA--AGYPLPPFD-F---  331 (435)
Q Consensus       266 ~~~i~~----~~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~--~g~~~~~~d-~---  331 (435)
                      ++++++    +|++|++++|+||+| .+   +++++|.++|++||+++|+|+|+..--..|...  .++...... .   
T Consensus       167 e~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~  246 (460)
T PRK13238        167 EALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIARE  246 (460)
T ss_pred             HHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhh
Confidence            999984    799999999999998 45   678999999999999999999874311111111  111111110 0   


Q ss_pred             CCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        332 SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      .....|++++|+||.+++|.| |+++.+++++.+.
T Consensus       247 ~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~  280 (460)
T PRK13238        247 MFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTE  280 (460)
T ss_pred             hcccCcEEEEecccCCCCcce-eEEEcChHHHHHH
Confidence            012369999999999999887 8877777666554

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.86  E-value=8.9e-20  Score=182.97  Aligned_cols=214  Identities=18%  Similarity=0.156  Sum_probs=161.2

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+. .+++.+.+.+.+......    .....|....|.+++++.+++++...... .                
T Consensus        36 ~~l~~g~p~~-~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~-~----------------   93 (394)
T PRK06836         36 FDFSLGNPSV-PPPAAVKEALRELAEEED----PGLHGYMPNAGYPEVREAIAESLNRRFGT-P----------------   93 (394)
T ss_pred             EEecCcCCCC-CCCHHHHHHHHHHHhcCC----cCcccCCCCCCCHHHHHHHHHHHHHHhCC-C----------------
Confidence            4455566765 456778888877665321    11234556678999999999988764221 1                


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC-cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS-YT  259 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~-~~  259 (435)
                               +++ +++++|+|+++++..++.++..+++.        |++++|+|..+...++..|++++.+|++++ +.
T Consensus        94 ---------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~  155 (394)
T PRK06836         94 ---------LTA-DHIVMTCGAAGALNVALKAILNPGDE--------VIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQ  155 (394)
T ss_pred             ---------CCc-CcEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCCCccHHHHHHHcCCEEEEEecCCccCc
Confidence                     233 38999999999999999998776665        999999999999999999999999999854 78


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHH------cCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEK------YGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~------~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                      +|+++++++++++++++++++|+||||.+   +++++|.++|++      ||+++++|++|..+...     +...+.+ 
T Consensus       156 ~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~-  229 (394)
T PRK06836        156 PDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD-----GAEVPYI-  229 (394)
T ss_pred             CCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC-----CCCCCCh-
Confidence            99999999999899999999999999998   568888889999      89999999999987541     1111111 


Q ss_pred             CCCCCccEEEecCCCCCC-ccCCcEEEEEeC
Q psy10210        331 FSLPGVTSISVDTHKYGF-TPKGSSVVLYRD  360 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~  360 (435)
                      ....+-.++..|++|... ...++|+++..+
T Consensus       230 ~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~  260 (394)
T PRK06836        230 FKYYDNSIVVYSFSKSLSLPGERIGYIAVNP  260 (394)
T ss_pred             HHccCcEEEEecchhhccCcceeeEEEecCH
Confidence            111223577778999743 346789966654

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.86  E-value=4.6e-20  Score=199.48  Aligned_cols=262  Identities=17%  Similarity=0.082  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHH-HHhhhhcCCC
Q psy10210        148 LVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYR-DYAREEKGIS  224 (435)
Q Consensus       148 l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~-~~~~~~~g~~  224 (435)
                      +.+++.+.+.. .+.||.... .+....++..++++.+++++|+++++ .+++|+|+|+|+.++..++. .++       
T Consensus        51 V~~~~~~~~~~-~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~g-------  122 (805)
T PLN02724         51 LEAALADFSSN-VYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSE-------  122 (805)
T ss_pred             HHHHHHHHHhh-ccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCC-------
Confidence            33333333332 344554321 23456778899999999999997764 68999999999999988762 223       


Q ss_pred             CCeEEEeCCCchhHH---HHHHHcCCEEEEEecC--------CCccccH--HHHHHHh----------hcCceEEEEeCC
Q psy10210        225 LPEIVLPTTAHPAFD---KAANYFGMKVKHIRLT--------SSYTVDL--AALQSAI----------TGNTVMLVGSMP  281 (435)
Q Consensus       225 ~~~viv~~~~~~~~~---~~~~~~g~~v~~vp~~--------~~~~~d~--~~l~~~i----------~~~~~~v~~~~p  281 (435)
                       ++|+++...|++..   ..++..|++++.+|++        ..+.+++  +++++.+          .++|++|++++.
T Consensus       123 -d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~v  201 (805)
T PLN02724        123 -SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSE  201 (805)
T ss_pred             -CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEcc
Confidence             45999888898854   3345569999999886        3344443  5676653          245789999999


Q ss_pred             CCCcccccCHHHHHHHHHHc--------CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCc
Q psy10210        282 NFPYGTMDDIGAIAKLGEKY--------GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS  353 (435)
Q Consensus       282 ~nptG~~~~i~~i~~la~~~--------~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~  353 (435)
                      +|.+|.+.|++.|.++++..        ++++++|++++..           +.++|+...++|++++|+|||+++|.|+
T Consensus       202 sN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g-----------~~piDv~~~~~Dfl~~S~HK~~GgP~G~  270 (805)
T PLN02724        202 CNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCG-----------TSPPDLSRYPADFVVVSFYKIFGYPTGL  270 (805)
T ss_pred             ccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcC-----------CCCCChhhcCCCEEEEecceeccCCCCc
Confidence            99999999999775555532        3579999998543           3478988889999999999997669999


Q ss_pred             EEEEEeCCccccccccccCCCCCCCCC-----------------CCccccCCCchHHHHHHHHHHH---hcHHHHHHHHH
Q psy10210        354 SVVLYRDLKYKHCQYFVTSDWPGGNYG-----------------SPSVSGSRSGGIIATCWAAMMY---FGFEAQVWICV  413 (435)
Q Consensus       354 g~il~~~~~~~~~~~~~~~~~~gg~~~-----------------~~~~~gsr~~~~ia~~~a~l~~---~g~~g~~~~~~  413 (435)
                      |+++++++.+ ..   ..|.+.||...                 ..-..|+.+...++++.++++.   +|.+.+.++.+
T Consensus       271 G~L~vr~~~~-~~---l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~  346 (805)
T PLN02724        271 GALLVRRDAA-KL---LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTW  346 (805)
T ss_pred             eEEEEehhhh-hh---hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            9988886433 22   23444444210                 0113466776666666666554   57777888888


Q ss_pred             HHHHHHHHHHHhcC------Cccccc
Q psy10210        414 RYHFNYKSCLQNLS------DLWLYL  433 (435)
Q Consensus       414 ~~~~~~~~~~~~l~------~l~~~~  433 (435)
                      ++.+++.+.+++++      .+..|.
T Consensus       347 ~L~~~l~~~L~~l~~~~g~~~v~iyg  372 (805)
T PLN02724        347 ALTHYVANSLRNLKHGNGAPVCVLYG  372 (805)
T ss_pred             HHHHHHHHHHHhccCCCCCeEEEEcC
Confidence            88888888888776      466664

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.86  E-value=2.3e-20  Score=191.33  Aligned_cols=192  Identities=16%  Similarity=0.147  Sum_probs=144.9

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD  215 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~  215 (435)
                      ...|..+.|.+++++++++++.+..... .                       ..++ ++|++|+|+++++.+++.++.+
T Consensus        87 ~~~y~~~~G~~~LR~aiA~~l~~~~g~~-v-----------------------~v~p-e~Ivit~Ga~~al~~l~~~l~~  141 (496)
T PLN02376         87 IANFQDYHGLKKFRQAIAHFMGKARGGK-V-----------------------TFDP-ERVVMSGGATGANETIMFCLAD  141 (496)
T ss_pred             hhccCCCCCcHHHHHHHHHHHHHHhCCC-C-----------------------cCCh-hhEEEccchHHHHHHHHHHhCC
Confidence            3456777899999999999987643210 0                       0234 3899999999999999999999


Q ss_pred             HhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC--CCccccHHHHHHHhh------cCceEEEEeCCCCCcc
Q psy10210        216 YAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT--SSYTVDLAALQSAIT------GNTVMLVGSMPNFPYG  286 (435)
Q Consensus       216 ~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~--~~~~~d~~~l~~~i~------~~~~~v~~~~p~nptG  286 (435)
                      +|+.        |++++|+|+.+...++ ..|++++.||++  +++.+|++++++++.      .++++|++++|+||||
T Consensus       142 pGD~--------Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG  213 (496)
T PLN02376        142 PGDV--------FLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLG  213 (496)
T ss_pred             CCCE--------EEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCC
Confidence            8887        9999999999998877 589999999996  457899999976542      3689999999999999


Q ss_pred             cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC---C----CCC--CCCccEEEecCCCCC-CccCCc
Q psy10210        287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP---F----DFS--LPGVTSISVDTHKYG-FTPKGS  353 (435)
Q Consensus       287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~---~----d~~--~~gvd~~~~s~hK~~-~~p~g~  353 (435)
                      .+   +.+++|+++|++|++++|+||+|+.+++.     +...++   +    +..  ......++.|++|.+ ..+..+
T Consensus       214 ~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~-----~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRv  288 (496)
T PLN02376        214 TMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFA-----GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRV  288 (496)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEEcCccccccC-----CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceE
Confidence            99   66888999999999999999999987642     111111   1    110  011223466899974 345778


Q ss_pred             EEEEEeCCcccc
Q psy10210        354 SVVLYRDLKYKH  365 (435)
Q Consensus       354 g~il~~~~~~~~  365 (435)
                      |+++..++.+..
T Consensus       289 G~li~~~~~l~~  300 (496)
T PLN02376        289 GIVYSFNDSVVS  300 (496)
T ss_pred             EEEEECCHHHHH
Confidence            997766665544

>PRK08175 aminotransferase; Validated

Probab=99.85  E-value=1.2e-19  Score=182.22  Aligned_cols=218  Identities=15%  Similarity=0.154  Sum_probs=158.2

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|... .+..+++.+.+.....      ....|....|.+++++++++++.+.....                 
T Consensus        32 i~l~~g~p~~~-~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-----------------   87 (395)
T PRK08175         32 IDFSMGNPDGP-TPPHIVEKLCEVAQRP------DTHGYSTSRGIPRLRRAISRWYQDRYDVD-----------------   87 (395)
T ss_pred             EEcCCCCCCCC-CCHHHHHHHHHHHhCC------CcCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            34555667763 4556777777665431      23456677799999999999987642211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV  260 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~  260 (435)
                               +++++++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+++++ .
T Consensus        88 ---------~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~  149 (395)
T PRK08175         88 ---------IDPESEAIVTIGSKEGLAHLMLATLDHGDT--------VLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV-D  149 (395)
T ss_pred             ---------CCCCCcEEEccCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHHcCCeEEEEecccCC-C
Confidence                     133337999999999999999988877776        9999999999999899999999999987543 3


Q ss_pred             cHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-
Q psy10210        261 DLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-  332 (435)
Q Consensus       261 d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-  332 (435)
                      +.++++++++   ++++++++++|+||||.+   +.+++|.++|++||+++|+|++|+.+...     +...+++ .+. 
T Consensus       150 ~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~-----~~~~~~~~~~~~  224 (395)
T PRK08175        150 FFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYD-----GWKAPSIMQVPG  224 (395)
T ss_pred             cHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccC-----CCCCcchhcCCC
Confidence            5788888776   378999999999999998   45689999999999999999999876541     1111111 111 


Q ss_pred             CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        333 LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ..+..+.+.|+.|..+ ....+|+++ .++++.+.
T Consensus       225 ~~~~~i~~~S~SK~~g~pGlRiG~~~-~~~~l~~~  258 (395)
T PRK08175        225 AKDVAVEFFTLSKSYNMAGWRIGFMV-GNPELVSA  258 (395)
T ss_pred             cccCEEEEeeccccccCcchhheeee-CCHHHHHH
Confidence            1234466788999853 335679855 55666543

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.85  E-value=4.9e-20  Score=177.03  Aligned_cols=266  Identities=17%  Similarity=0.081  Sum_probs=198.0

Q ss_pred             hCCCCCCCCCcccccccC-C--hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCCh
Q psy10210        126 ARGHYDWKHGRVSGAVYY-Y--QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGG  202 (435)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~-g--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~gg  202 (435)
                      +.++..|.+-..++++.. |  +|.+.+++.++.++....+.+-      ..+...++.+.+++..+ . .+.++++++|
T Consensus        38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~------~~~~~~~la~~L~~~s~-~-~d~vff~NSG  109 (404)
T COG4992          38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF------YNEPQAELAEKLVELSP-F-ADRVFFCNSG  109 (404)
T ss_pred             CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc------CChHHHHHHHHHHhhCc-c-ccEEEEcCCc
Confidence            345556665555555544 4  8999999999888765443321      22445566777777776 2 3489999999


Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHh
Q psy10210        203 TESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAI  269 (435)
Q Consensus       203 teai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i  269 (435)
                      +||++.|++.+|.++.   +..+++||....+|++-...+-..+.             .++++|.     -|+++++++|
T Consensus       110 aEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai  181 (404)
T COG4992         110 AEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAI  181 (404)
T ss_pred             HHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHh
Confidence            9999999999998875   34467799988888873332222221             2333333     2899999999


Q ss_pred             hcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecC
Q psy10210        270 TGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDT  343 (435)
Q Consensus       270 ~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~  343 (435)
                      +++|++|++...+-..|++    +.++++.++|++||+++|.||+|.|+        |+....|.+...||  |+++.. 
T Consensus       182 ~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~--------GRTGk~fA~e~~gV~PDI~tla-  252 (404)
T COG4992         182 DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGL--------GRTGKLFAYEHYGVEPDILTLA-  252 (404)
T ss_pred             ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCC--------CccchHHHHHHhCCCCCEEEee-
Confidence            9999999999999988888    67999999999999999999999987        44445666666676  777766 


Q ss_pred             CCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210        344 HKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCL  423 (435)
Q Consensus       344 hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~  423 (435)
                       |.++|..++|.++.+ +.....   +.+.-.|.+|+..++++       +++.++++.+..+++.+++++..+.+.+.+
T Consensus       253 -K~LgGG~PigA~la~-~~~~~~---~~~G~HgSTfGGNpLac-------Av~~a~l~~l~~e~ll~~v~~~g~~~~~~L  320 (404)
T COG4992         253 -KALGGGFPIGAMLAT-EEIASA---FTPGDHGSTFGGNPLAC-------AVALAVLEVLLEEGLLENVREKGEYLLQRL  320 (404)
T ss_pred             -ccccCCccceeeEEc-hhhhhc---CCCCcccCCCCcCHHHH-------HHHHHHHHHHcchhHHHHHHHHHHHHHHHH
Confidence             877777889998887 443332   45666676666655554       788899999999999999999999988888


Q ss_pred             HhcCC
Q psy10210        424 QNLSD  428 (435)
Q Consensus       424 ~~l~~  428 (435)
                      +++..
T Consensus       321 ~~l~~  325 (404)
T COG4992         321 RELKR  325 (404)
T ss_pred             HHHhh
Confidence            87543

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.85  E-value=1.1e-19  Score=182.43  Aligned_cols=215  Identities=16%  Similarity=0.167  Sum_probs=157.5

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|..+. ++.+.+.+.+... .       ...|....|.+++++++++.+.... .                  
T Consensus        33 i~l~~~~~~~~~-~~~~~~a~~~~~~-~-------~~~Y~~~~g~~~lr~~ia~~~~~~~-~------------------   84 (397)
T PRK07568         33 YHLNIGQPDIKT-PEVFFEAIKNYDE-E-------VLAYSHSQGIPELREAFAKYYKKWG-I------------------   84 (397)
T ss_pred             EEecCCCCCCCC-CHHHHHHHHHHhc-C-------CcCcCCCCCCHHHHHHHHHHHHHhC-C------------------
Confidence            345556666533 5667777665432 1       2345567789999999999887421 1                  


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc-
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY-  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~-  258 (435)
                              +.++ +++++|+|+++++.+++.++.++++.        |++++|.|..+...++..|++++.+|++ +++ 
T Consensus        85 --------~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~  147 (397)
T PRK07568         85 --------DVEP-DEILITNGGSEAILFAMMAICDPGDE--------ILVPEPFYANYNGFATSAGVKIVPVTTKIEEGF  147 (397)
T ss_pred             --------CCCc-ceEEEcCChHHHHHHHHHHhcCCCCE--------EEEecCCCccHHHHHHHcCCEEEEeecCcccCC
Confidence                    1233 38999999999999999988776666        9999999999998899999999999986 333 


Q ss_pred             c-ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCC
Q psy10210        259 T-VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSL  333 (435)
Q Consensus       259 ~-~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~  333 (435)
                      . .+++++++++++++++|++++|+||||.+   +++++|+++|+++|+++|+|++|+++.+.     +...+ ...+..
T Consensus       148 ~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~-----~~~~~s~~~~~~  222 (397)
T PRK07568        148 HLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYD-----GLKYTSALSLEG  222 (397)
T ss_pred             CCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccC-----CCCccChhhcCC
Confidence            3 35799999998899999999999999998   46899999999999999999999987542     11111 112211


Q ss_pred             -CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 -PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 -~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                       ..-.+++.|++|... ....+|+++..++++.+
T Consensus       223 ~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~  256 (397)
T PRK07568        223 LEDRVIIIDSVSKRYSACGARIGCLISKNKELIA  256 (397)
T ss_pred             CcCCEEEEecchhhccCCCcceEEEecCCHHHHH
Confidence             222456678999743 34678997776666554

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.85  E-value=1.2e-19  Score=184.69  Aligned_cols=227  Identities=15%  Similarity=0.108  Sum_probs=155.4

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEc---CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMT---SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----  244 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t---~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----  244 (435)
                      ...++|..+++.++++||++++ ++.++   +||++++.+++.++.++++.        |++.+..|.+....+..    
T Consensus        77 ~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~sgt~an~~v~~al~~~gd~--------Ii~~~~ehg~~l~~~~~l~~~  147 (452)
T PTZ00094         77 VVDKIENLCQKRALEAFGLDPE-EWGVNVQPYSGSPANFAVYTALLQPHDR--------IMGLDLPSGGHLTHGFYTAKK  147 (452)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcc-cceeecCCCchHHHHHHHHHHhcCCCCE--------EEecccccCCccccccccccc
Confidence            3456666789999999999765 55555   89999999999999766665        99988888886544321    


Q ss_pred             ------cCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhh
Q psy10210        245 ------FGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP  317 (435)
Q Consensus       245 ------~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~  317 (435)
                            .+.++..++++.+|.+|++++++++.+ +++++++.  ++.+|...|+++|.++|+++|+++++|++|+.+..+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~  225 (452)
T PTZ00094        148 KVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVA  225 (452)
T ss_pred             ccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhcccc
Confidence                  123444566676789999999999964 66776654  334899999999999999999999999999877663


Q ss_pred             cccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc-ccccCCCCCCCCCCCccccCCCchHHHHH
Q psy10210        318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ-YFVTSDWPGGNYGSPSVSGSRSGGIIATC  396 (435)
Q Consensus       318 ~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~-~~~~~~~~gg~~~~~~~~gsr~~~~ia~~  396 (435)
                      .      +..+.++  .++|++++|+|||++||.| |+++++++ ..... ........      +.+.|+.....+++.
T Consensus       226 ~------~~~~~~~--~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~~~l~~~~~~~~~------p~~~G~~~~~~iaal  289 (452)
T PTZ00094        226 A------GVLPSPF--PYADVVTTTTHKSLRGPRS-GLIFYRKK-VKPDIENKINEAVF------PGLQGGPHNHQIAAI  289 (452)
T ss_pred             C------CCCCCCC--CCCcEEEcCCccCCCCCCc-eEEEEecc-cchHHHHhhccccC------CCCCCCchHHHHHHH
Confidence            1      1112222  3799999999999889998 77777654 22110 00000000      112234444456677


Q ss_pred             HHHHHHhcH---HHHHHHHHHHHHHHHHHHHh
Q psy10210        397 WAAMMYFGF---EAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       397 ~a~l~~~g~---~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .++++.+..   +.+.+++.++.+.+.+.+++
T Consensus       290 ~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~  321 (452)
T PTZ00094        290 AVQLKEVQSPEWKEYAKQVLKNAKALAAALEK  321 (452)
T ss_pred             HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence            777777633   44566666666666655544

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.85  E-value=6.5e-20  Score=181.53  Aligned_cols=248  Identities=17%  Similarity=0.131  Sum_probs=167.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh----
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE----  220 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~----  220 (435)
                      .+++.+++.+....+           -...++..++++.+++++|.+   ++++|+|+|+|+.+++.++.++||..    
T Consensus        26 ~~~v~~a~~~~~~~~-----------~~~~~~~~~~~~~~a~~~g~~---~~~~~~g~t~al~~al~al~~~Gd~~~~~~   91 (363)
T TIGR01437        26 SDEVADAQKRGAQNY-----------FEIKELVNKTGEYIANLLGVE---DAVIVSSASAGIAQSVAAVITRGNRYLVEN   91 (363)
T ss_pred             CHHHHHHHHHHHhcC-----------CCHHHHHHHHHHHHHHhhCCC---eEEEEcCHHHHHHHHHHHHhcCCCcchhhc
Confidence            566777776664331           023466777888889999864   57999999999999999998877620    


Q ss_pred             --c-CCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEE-EeCCCCCcccccCHH
Q psy10210        221 --K-GISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLV-GSMPNFPYGTMDDIG  292 (435)
Q Consensus       221 --~-g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~-~~~p~nptG~~~~i~  292 (435)
                        + -..+++|+++.|.|..+    ...+...|+++++++.+  +.+|+++++++++++|++++ +++++||+|.+.+++
T Consensus        92 ~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~  169 (363)
T TIGR01437        92 LHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVE  169 (363)
T ss_pred             ccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHH
Confidence              0 11245799999777654    56778889999998863  56999999999999998766 567889999999999


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS  372 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~  372 (435)
                      +|.++|++||+++|+|++|+.-+             ......|+|++++|+||++.||. .|+++ .++++.+..   .+
T Consensus       170 ~i~~~a~~~gi~vivD~a~~~~~-------------~~~~~~g~D~~~~S~~K~l~gp~-~G~l~-~~~~~i~~~---~~  231 (363)
T TIGR01437       170 DAAQVAQEHNLPLIVDAAAEEDL-------------QKYYRLGADLVIYSGAKAIEGPT-SGLVL-GKKKYIEWV---KL  231 (363)
T ss_pred             HHHHHHHHcCCeEEEECCCCCch-------------HHHHHcCCCEEEEeCCcccCCCc-eEEEE-EcHHHHHHH---Hh
Confidence            99999999999999999996110             01112368999999999888887 68755 455444331   11


Q ss_pred             CCCCCCCCCCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      .+.+.. .... .++   ..++++.+++..+   +.+...++.++ .+.+.+.+++++++..+
T Consensus       232 ~~~~~~-~~~~-~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~-~~~l~~~L~~i~g~~~~  288 (363)
T TIGR01437       232 QSKGIG-RAMK-VGK---ENILGLTAALEQYLSTGKESGAEMVAK-LTPFIEALNTLKGVSAS  288 (363)
T ss_pred             ccCCCc-ceec-cCH---HHHHHHHHHHHHHHccCcccHHHHHHH-HHHHHHHHhcCCCeEEE
Confidence            122211 0000 111   1234444555443   44444444443 44566667777776554

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.85  E-value=2.1e-19  Score=180.29  Aligned_cols=251  Identities=10%  Similarity=0.035  Sum_probs=172.0

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++++++.+.+.++...++... ...+..+...++++.+++++|.+   ++++++||++|+..++.++.+++|.     
T Consensus        54 ~~~v~~~~~~~~~~~~~~~~~s~-~~~G~~~~~~~le~~ia~~~g~~---~~ii~~~~~~a~~~~~~~l~~~gd~-----  124 (393)
T TIGR01822        54 HPDLIQAAKDALDEHGFGMSSVR-FICGTQDIHKELEAKIAAFLGTE---DTILYASCFDANGGLFETLLGAEDA-----  124 (393)
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcC-cccCChHHHHHHHHHHHHHhCCC---cEEEECchHHHHHHHHHHhCCCCCE-----
Confidence            78889988888876533332222 22344666778888999999873   4677789999999999888777766     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                         |++++++|+++...++..+.+.+.++     ..|++++++++++      ++++|++++++||+|.+.++++|.++|
T Consensus       125 ---vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la  196 (393)
T TIGR01822       125 ---IISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLA  196 (393)
T ss_pred             ---EEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHH
Confidence               99999999999999888887765543     3789999988874      788999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      ++||+++|+|++|+.+...   ..|.+.. ..+. ..++|+++.|+||++.++ ..|++ +.++++.+........+   
T Consensus       197 ~~~~~~li~De~~~~g~~~---~~~~~~~~~~~~-~~~~di~~~s~sK~l~g~-r~G~~-~~~~~~~~~l~~~~~~~---  267 (393)
T TIGR01822       197 DKYDALVMVDECHATGFLG---PTGRGSHELCGV-MGRVDIITGTLGKALGGA-SGGFT-TARKEVVELLRQRSRPY---  267 (393)
T ss_pred             HHcCCEEEEECCccccCcC---CCCCchHHhcCC-CCCCeEEEEEChHHhhCC-CcEEE-EeCHHHHHHHHHhCccc---
Confidence            9999999999999643321   1111111 1222 236899999999995444 45874 45555544321111111   


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                           ...++.+...++++.++++.+. .+...+++++..+.+.+.++++
T Consensus       268 -----~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~  312 (393)
T TIGR01822       268 -----LFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA  312 (393)
T ss_pred             -----eecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                 1123333333444555665542 2456666777777776666653

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.84  E-value=6.5e-20  Score=182.32  Aligned_cols=217  Identities=12%  Similarity=-0.018  Sum_probs=158.4

Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHH
Q psy10210        102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVI  181 (435)
Q Consensus       102 ~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  181 (435)
                      .+..+.|.. .+++.+.+.+.+.+.....    ....| +..|.+++++++++++.+.... +                 
T Consensus        30 ~l~~~~~~~-~~~~~~~~al~~~l~~~~~----~~~~Y-~~~g~~~lr~aia~~~~~~~~~-~-----------------   85 (368)
T PRK03317         30 RLNTNENPY-PPSPALVADIAEAVAEAAA----GLNRY-PDRDAVALRADLAAYLTAQTGV-G-----------------   85 (368)
T ss_pred             EecCCCCCC-CCCHHHHHHHHHHHhhhhh----hhccC-CCCchHHHHHHHHHHhhhhccC-C-----------------
Confidence            344455555 4556688888776553211    12223 3457888999999888764322 1                 


Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD  261 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d  261 (435)
                              .++ +++++|+|+++++.+++.++.++++.        |+++.|+|+.+...++..|.+++.+|.++++.+|
T Consensus        86 --------~~~-~~I~it~G~~~~l~~~~~~~~~~gd~--------v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d  148 (368)
T PRK03317         86 --------LTV-ENVWAANGSNEILQQLLQAFGGPGRT--------ALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLD  148 (368)
T ss_pred             --------CCh-hhEEECCCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCC
Confidence                    233 38999999999999999999888877        9999999999999999999999998877778899


Q ss_pred             HHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCCccEE
Q psy10210        262 LAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPGVTSI  339 (435)
Q Consensus       262 ~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~gvd~~  339 (435)
                      ++++++++. .+++++++++|+||||.+-+.+++.++++.+++++|+||+|++|...     |.. ...... ...-.++
T Consensus       149 ~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~-----~~~-~~~~~~~~~~~~i~  222 (368)
T PRK03317        149 VDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRS-----GTP-SALTLLPEYPRLVV  222 (368)
T ss_pred             HHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhccc-----CCc-CHHHHHHhCCCEEE
Confidence            999999987 47889999999999999999999999999999999999999987431     110 111111 1122345


Q ss_pred             EecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        340 SVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       340 ~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      +.|+.|... +...+|+++ .++++.+.
T Consensus       223 ~~SfSK~~g~~GlRiG~~~-~~~~~~~~  249 (368)
T PRK03317        223 SRTMSKAFAFAGGRLGYLA-AAPAVVDA  249 (368)
T ss_pred             EEechhhhccchhhhhhhh-CCHHHHHH
Confidence            558999743 345678865 45555443

>PRK07179 hypothetical protein; Provisional

Probab=99.84  E-value=2.2e-19  Score=180.89  Aligned_cols=251  Identities=14%  Similarity=0.056  Sum_probs=170.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++++++.+.+.++. .++.....+..-.....++.+.+++++|.+   .+++|+||++|+.++++++..+++.    
T Consensus        69 ~~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~sG~~An~~~l~~l~~~g~~----  140 (407)
T PRK07179         69 GHPDIIKAQIAALQEEG-DSLVMSAVFLHDDSPKPQFEKKLAAFTGFE---SCLLCQSGWAANVGLLQTIADPNTP----  140 (407)
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCccccccCCchHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHhCCCCCE----
Confidence            58999999999998752 222211122222234455567888889874   4588999999999999998766655    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG  302 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~  302 (435)
                          |+++.+.|.+....++..|++++.++.     .|++++++++++ ++++|++++++||+|.+.++++|.++|++||
T Consensus       141 ----v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~  211 (407)
T PRK07179        141 ----VYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFG  211 (407)
T ss_pred             ----EEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcC
Confidence                999999999998888888988765542     589999999976 5789999999999999999999999999999


Q ss_pred             CcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCC
Q psy10210        303 IPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGS  381 (435)
Q Consensus       303 ~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~  381 (435)
                      +++|+|++|+.+..   +..|.+.. .++.. .++|+++.|+||.+ ++. +|+++.+ +++.+.........       
T Consensus       212 ~~livDea~~~g~~---g~~g~g~~~~~~~~-~~vdi~~~S~sK~~-g~~-~G~l~~~-~~~~~~~~~~~~~~-------  277 (407)
T PRK07179        212 CVLVVDESHSLGTH---GPQGAGLVAELGLT-SRVHFITASLAKAF-AGR-AGIITCP-RELAEYVPFVSYPA-------  277 (407)
T ss_pred             CEEEEECcccccCc---CCCCCchHHhcCCC-CCCCEEEeechHhh-hcc-CeEEEeC-HHHHHHHHHhCcCe-------
Confidence            99999999975433   11121100 12221 35799999999985 553 6886654 45433321111110       


Q ss_pred             CccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        382 PSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       382 ~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       ...++.....++++.++++.+.. +...+++++..+.+.+.++++
T Consensus       278 -~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~  322 (407)
T PRK07179        278 -IFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL  322 (407)
T ss_pred             -eeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence             01123333444455556665533 245566777777777776665

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.84  E-value=2.3e-19  Score=177.16  Aligned_cols=163  Identities=17%  Similarity=0.132  Sum_probs=129.2

Q ss_pred             HHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHH
Q psy10210        185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAA  264 (435)
Q Consensus       185 a~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~  264 (435)
                      +++++.+++ ++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|++++.+|+++++.+|+++
T Consensus        69 a~~~~~~~~-~i~it~G~~~~l~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~  139 (351)
T PRK14807         69 ARYCSVVPT-NIFVGNGSDEIIHLIMLAFINKGDV--------VIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGS  139 (351)
T ss_pred             HHHhCCCcc-cEEEecCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHH
Confidence            333344444 8999999999999999998877776        9999999999999999999999999998778899999


Q ss_pred             HHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecC
Q psy10210        265 LQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDT  343 (435)
Q Consensus       265 l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~  343 (435)
                      +++++++ ++++|++++|+||||.+-+.+++.++|++++.++++|++|.++.       +....+. .....-.++..|+
T Consensus       140 l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-------~~~~~~~-~~~~~~vi~~~S~  211 (351)
T PRK14807        140 FIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-------GNTIVDV-INEFENLIVLRTL  211 (351)
T ss_pred             HHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-------ccchHHH-hhhCCCEEEEecc
Confidence            9999975 89999999999999999999999999999888999999998752       1111111 1111235677789


Q ss_pred             CCCCC-ccCCcEEEEEeCCcccc
Q psy10210        344 HKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       344 hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      +|... ....+|+++ .++++.+
T Consensus       212 SK~~~~~GlRiG~~v-~~~~~~~  233 (351)
T PRK14807        212 SKAFGLAGLRVGYAV-ANENILK  233 (351)
T ss_pred             hHhcccchhceeeee-cCHHHHH
Confidence            99843 446789955 4555544

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.84  E-value=5.3e-19  Score=173.72  Aligned_cols=235  Identities=18%  Similarity=0.107  Sum_probs=157.3

Q ss_pred             hhHHHHHHHHHHHHHHHhCC-CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEE
Q psy10210        171 PGVCKMEAEVIKMCARMFNG-GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV  249 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~-~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v  249 (435)
                      ++..+++..+.+++...++. ....++++++|+|+++..++.++..+++.        |++++++|.++..+++..|.++
T Consensus        36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~--------vl~~~~~~~~~~~~~~~~~~~~  107 (350)
T cd00609          36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDE--------VLVPDPTYPGYEAAARLAGAEV  107 (350)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHCCCEE
Confidence            33444444444444444332 12247999999999999999998766655        9999999999999999999999


Q ss_pred             EEEecCCCccccH--HHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        250 KHIRLTSSYTVDL--AALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       250 ~~vp~~~~~~~d~--~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +.+|.++++..+.  +.+++.+++++++|++++++||+|.+.+   +++|.++|+++|+++|+|++|+++.....   ..
T Consensus       108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~---~~  184 (350)
T cd00609         108 VPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGE---PP  184 (350)
T ss_pred             EEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc---cc
Confidence            9999986666655  6777777789999999999999999965   55556899999999999999988765211   00


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      . ........+.|++..|+||+.+ ++.++|+++.+++++.+....... +.         .++.+.....+....++..
T Consensus       185 ~-~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~l~~~  253 (350)
T cd00609         185 P-ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP-YT---------TSGPSTLSQAAAAAALDDG  253 (350)
T ss_pred             c-cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH-hc---------ccCCChHHHHHHHHHHhCc
Confidence            0 0123345567899999999865 456789977766455443211111 11         1122333333455555554


Q ss_pred             --cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        404 --GFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       404 --g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                        +.+...+++++..+.+.+.+++..
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~~L~~~~  279 (350)
T cd00609         254 EEHLEELRERYRRRRDALLEALKELG  279 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence              334445555555555655555543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.84  E-value=1.4e-19  Score=179.05  Aligned_cols=156  Identities=19%  Similarity=0.216  Sum_probs=123.3

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-cC
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-GN  272 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-~~  272 (435)
                      +++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|++++.+|+++++.+|++++++++. .+
T Consensus        82 ~~I~~t~G~~~~i~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~  153 (356)
T PRK04870         82 ADVLLGNGSDELIQLLALACAKPGAT--------VLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHR  153 (356)
T ss_pred             CcEEEcCCHHHHHHHHHHHhcCCCCE--------EEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC
Confidence            37999999999999999998877776        9999999999999999999999999998778899999999986 48


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCC
Q psy10210        273 TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG  352 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g  352 (435)
                      ++++++++|+||||.+-+.+++.++++..++++|+|++|..|...     +. .+..  ....-.+++.|++|++..+..
T Consensus       154 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~-----~~-~~~~--~~~~~vi~~~S~SK~~~~GlR  225 (356)
T PRK04870        154 PALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGD-----SW-LPRL--ARFPNLLVMRTVSKLGLAGLR  225 (356)
T ss_pred             CCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCc-----ch-HHHH--hhCCCEEEEecchhhhhHHHh
Confidence            899999999999999977777777777668899999999876421     10 0011  111235677789997544566


Q ss_pred             cEEEEEeCCccccc
Q psy10210        353 SSVVLYRDLKYKHC  366 (435)
Q Consensus       353 ~g~il~~~~~~~~~  366 (435)
                      +|+++ .++++.+.
T Consensus       226 iG~~i-~~~~~i~~  238 (356)
T PRK04870        226 LGYLA-GHPAWIAE  238 (356)
T ss_pred             hhhhh-CCHHHHHH
Confidence            89955 44555443

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.84  E-value=3.3e-20  Score=182.14  Aligned_cols=171  Identities=20%  Similarity=0.193  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHI  252 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~v  252 (435)
                      ...++++.+++++|  + .++++++|||+++.+++.++.++++.        |++++++|.++..   .+...|++++.+
T Consensus        33 ~~~~l~~~~a~~~g--~-~~~~~~~~gt~a~~~~~~~l~~~gd~--------v~~~~~~~~~~~~~~~~~~~~g~~~~~v  101 (338)
T cd06502          33 TTAKLEARAAELFG--K-EAALFVPSGTAANQLALAAHTQPGGS--------VICHETAHIYTDEAGAPEFLSGVKLLPV  101 (338)
T ss_pred             HHHHHHHHHHHHhC--C-CeEEEecCchHHHHHHHHHhcCCCCe--------EEEecCcceeeecCCcHHHHcCceEEee
Confidence            34566678888888  3 37889999999999999998777666        9999999987543   345689999999


Q ss_pred             ecCCCccccHHHHHHHhhc-------CceEEEEeCCCCCccc--ccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        253 RLTSSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGT--MDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~--~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      |.+. +.+|++++++++++       ++++|++++|+||.|.  .+++++|+++|++||+++|+|++|..+....   .|
T Consensus       102 ~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~---~~  177 (338)
T cd06502         102 PGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAA---LG  177 (338)
T ss_pred             cCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHh---cC
Confidence            9864 77999999999975       7899999999998553  3788999999999999999999986543311   12


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      .   .......++|+++.++||++++| | |.+++.++++.+.
T Consensus       178 ~---~~~~~~~~~d~~~~s~sK~~~~~-~-g~~~~~~~~~~~~  215 (338)
T cd06502         178 V---ALKTYKSGVDSVSFCLSKGGGAP-V-GAVVVGNRDFIAR  215 (338)
T ss_pred             C---CHHHHHhcCCEEEEeccccCCCc-c-ceEEECCHHHHHH
Confidence            1   12222246799999999996545 4 3446666666544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.84  E-value=1.2e-18  Score=171.24  Aligned_cols=327  Identities=19%  Similarity=0.226  Sum_probs=193.3

Q ss_pred             hhchhhHHHHHHHHHHHH----HHHH-hhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCC
Q psy10210         70 RKIPAVRKKLEEETGKVA----KLFQ-DDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYY  144 (435)
Q Consensus        70 ~~lp~~~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g  144 (435)
                      |++|...+.++++|+.+.    +++. +.++.... ..-...+|+. .++.++++.+.+...++..  .....+.+.|..
T Consensus         2 ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~-~~~~~~lp~~-~sE~e~~r~~~~la~kN~~--~~~fiG~G~y~~   77 (429)
T PF02347_consen    2 RYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIR-LKKPLNLPEP-LSEYELLRHLERLASKNKS--YTSFIGAGSYTH   77 (429)
T ss_dssp             ------HHHHHHHHHHCT-SSTGGGG-TTS-GGG--SS-----------HHHHHHHHHHHHTTS----TTS---CTTT--
T ss_pred             CCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhc-CCCCCCCCCC-CCHHHHHHHHHHHHhcCCC--CCccccccccCc
Confidence            688998899999998875    3444 33333221 1123466765 8999999999999887654  234444444443


Q ss_pred             -hHhHHHH-HHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 -QQDLVDL-LTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 -~~~l~~~-i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                       .|...+. +.+.-+-.....|++|+.+++..++..|...++++++|.+-. +.-+..|+|.+-..++.+.+....+   
T Consensus        78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdva-NaSlyd~atA~aEa~~ma~r~~~~~---  153 (429)
T PF02347_consen   78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVA-NASLYDGATAAAEAMLMAVRATKRK---  153 (429)
T ss_dssp             ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE--SEBSSCCHHHHHHHHHHHHHHTT----
T ss_pred             eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCcc-CCCCCChhHHHHHHHHHHHHhcccC---
Confidence             5665555 554433322335999999999999999999999999999754 5677888887777776666543321   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                        +.+|+++...|+.+....+.    .|++++.+|.++++..|        ++++.+|++.+||+ .|.++++++|.+++
T Consensus       154 --~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~  222 (429)
T PF02347_consen  154 --RNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DDDTAAVMVQNPNT-FGVFEDIKEIADIA  222 (429)
T ss_dssp             ----EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------STTEEEEEEESS-T-TSB--THHHHHHHH
T ss_pred             --CcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------ccCeEEEEeecCCC-CceEeeHHHHHHHH
Confidence              45699999999998875544    58999999988777666        67899999999998 99998899999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC-----CccCCcEEEEEeCCcccccc----cc
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG-----FTPKGSSVVLYRDLKYKHCQ----YF  369 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~-----~~p~g~g~il~~~~~~~~~~----~~  369 (435)
                      +++|..+++ .+-  ..     ..+.-.+|   ...|+|+++.+ ||.+     +|++++|++.++++ +.+..    .-
T Consensus       223 h~~gal~~~-~ad--~~-----aL~~l~~P---ge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r~lPGRiVG  289 (429)
T PF02347_consen  223 HAAGALVIV-GAD--PN-----ALGGLKSP---GEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVRQLPGRIVG  289 (429)
T ss_dssp             HHTT-EEEE-CGG--CC-----GCCTC--G---GGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGGGS-S-EEE
T ss_pred             HHcCCEEEE-ecC--HH-----HHhCcCCh---hhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhhhCCCceec
Confidence            999999887 431  10     01111122   34589999555 5543     34456899888876 33221    00


Q ss_pred             ccCCCCCCCC----------------CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        370 VTSDWPGGNY----------------GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       370 ~~~~~~gg~~----------------~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      ...|-.|...                ++.++ ||-.+.....++..+..+|.+|+++..+++.+++.++.++|.++
T Consensus       290 ~t~D~~G~~~~~ltLqtREQHIrReKAtSNI-ctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~  364 (429)
T PF02347_consen  290 QTKDADGKRAFVLTLQTREQHIRREKATSNI-CTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI  364 (429)
T ss_dssp             EEEBCCCSCCEEEE-GGGTCHHHGCCSTT----SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             ccccccccceeeeccccccccccccchhhhh-hhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            1122222110                01111 11111222356677889999999999999999999999998886

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.83  E-value=7.4e-20  Score=186.85  Aligned_cols=193  Identities=16%  Similarity=0.146  Sum_probs=145.6

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD  215 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~  215 (435)
                      ...|..+.|.+++++++++++..+.... .                       ..++ ++|++|+|+++++.+++.++++
T Consensus        79 l~~Y~~~~G~~~LR~aiA~~l~~~~~~~-~-----------------------~v~~-~~Iiit~Ga~~al~~l~~~l~~  133 (468)
T PLN02450         79 LALFQDYHGLPAFKNALAEFMSEIRGNK-V-----------------------TFDP-NKLVLTAGATSANETLMFCLAE  133 (468)
T ss_pred             hhcCCCCCChHHHHHHHHHHHHHhhCCC-C-----------------------CcCh-HHeEEccChHHHHHHHHHHhCC
Confidence            3446677799999999999997643211 1                       0133 3899999999999999999998


Q ss_pred             HhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC--CCccccHHHHHHHhhc------CceEEEEeCCCCCcc
Q psy10210        216 YAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT--SSYTVDLAALQSAITG------NTVMLVGSMPNFPYG  286 (435)
Q Consensus       216 ~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~--~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG  286 (435)
                      +++.        |++++|+|+.+...+. ..|++++.+|++  +++.+|++++++++.+      +++++++++||||||
T Consensus       134 pGd~--------Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG  205 (468)
T PLN02450        134 PGDA--------FLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLG  205 (468)
T ss_pred             CCCE--------EEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCC
Confidence            8887        9999999999988887 589999999985  5667888999988864      789999999999999


Q ss_pred             cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC---------CCCCccEEEecCCCCCC-ccCCc
Q psy10210        287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF---------SLPGVTSISVDTHKYGF-TPKGS  353 (435)
Q Consensus       287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~---------~~~gvd~~~~s~hK~~~-~p~g~  353 (435)
                      .+   +.+++|.++|++|++++|+||+|+.+.+.  +. .+. .....         ....-.++..|+.|... ++..+
T Consensus       206 ~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~--~~-~~~-s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRi  281 (468)
T PLN02450        206 TTTTRTELNLLVDFITAKNIHLISDEIYSGTVFD--SP-GFV-SVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRV  281 (468)
T ss_pred             cccCHHHHHHHHHHHHHCCcEEEEEccccccccC--CC-Ccc-cHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccE
Confidence            99   67889999999999999999999987542  00 000 00111         01223466778999743 55788


Q ss_pred             EEEEEeCCcccc
Q psy10210        354 SVVLYRDLKYKH  365 (435)
Q Consensus       354 g~il~~~~~~~~  365 (435)
                      |+++..++.+.+
T Consensus       282 G~li~~~~~l~~  293 (468)
T PLN02450        282 GAIYSNDEMVVS  293 (468)
T ss_pred             EEEEECCHHHHH
Confidence            997665444433

>PRK05839 hypothetical protein; Provisional

Probab=99.83  E-value=6.8e-19  Score=175.30  Aligned_cols=214  Identities=16%  Similarity=0.061  Sum_probs=151.4

Q ss_pred             CCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210         99 AGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus        99 ~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      ....+..+.|..+. ++.+.+.+.+....        ...|....|.+++++++++++...... .              
T Consensus        25 ~~i~l~~~~p~~~~-~~~~~~a~~~~~~~--------~~~Y~~~~G~~~lr~aia~~l~~~~g~-~--------------   80 (374)
T PRK05839         25 KGLDLTIGEPQFET-PKFIQDALKNNAHL--------LNKYPKSAGEESLREAQRGFFKRRFKI-E--------------   80 (374)
T ss_pred             CeEEcCCCCCCCCC-CHHHHHHHHHHhhc--------cCCCCCCCCCHHHHHHHHHHHHHHhCC-C--------------
Confidence            34555666676543 45666666554321        234556678999999999998764322 1              


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH--HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD--YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~--~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                                 .++ +++++|+|+++++..++.++..  .++.        |++++|+|+.+...++..|++++.+|++.
T Consensus        81 -----------~~~-~~I~it~G~~~al~~~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~v~~v~~~~  140 (374)
T PRK05839         81 -----------LKE-NELIPTFGTREVLFNFPQFVLFDKQNPT--------IAYPNPFYQIYEGAAIASRAKVLLMPLTK  140 (374)
T ss_pred             -----------CCc-ceEEEecCcHHHHHHHHHHHhcCCCCCE--------EEECCCCchhhHHHHHhcCCEEEEeeccc
Confidence                       133 4899999999999999888752  4454        99999999999999999999999999973


Q ss_pred             --CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CC
Q psy10210        257 --SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FD  330 (435)
Q Consensus       257 --~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d  330 (435)
                        ++.+|+++.+  + +++++|++++||||||.+   +.+++|+++|++||+++++||+|+.+...     + ..+. .+
T Consensus       141 ~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~-----~-~~~s~~~  211 (374)
T PRK05839        141 ENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYEN-----T-PPPSLLE  211 (374)
T ss_pred             ccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccC-----C-CCCCHhh
Confidence              3555554432  2 468999999999999999   67889999999999999999999986421     0 1111 11


Q ss_pred             C------CCCCccEEEecCCCC-CCccCCcEEEEEeCCccccc
Q psy10210        331 F------SLPGVTSISVDTHKY-GFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       331 ~------~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~~~~~  366 (435)
                      .      ...+-.+++.|+.|. +.+...+|+++. ++++.+.
T Consensus       212 ~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~~~  253 (374)
T PRK05839        212 ASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASILKK  253 (374)
T ss_pred             hhcccCccccCcEEEEeccccccCCccceeEEEec-CHHHHHH
Confidence            1      011234667789995 566688999665 4555443

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.83  E-value=2.1e-19  Score=180.41  Aligned_cols=214  Identities=12%  Similarity=0.077  Sum_probs=151.8

Q ss_pred             CCccccCCCCC--CCCH--HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210        100 GLEYFLELPSQ--GRNR--LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK  175 (435)
Q Consensus       100 ~~~~~~~~P~~--~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  175 (435)
                      .+++..+.|..  ...|  +.+.+.+.+.....      ....|.+..|.+++|+++++++...... .           
T Consensus        28 ~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~------~~~~Y~~~~G~~~lR~aia~~~~~~~~~-~-----------   89 (396)
T PRK09257         28 KVNLGVGVYKDEQGRTPVLRAVKKAEARLLETE------TTKNYLPIEGLAAYRQAVQELLFGADSP-A-----------   89 (396)
T ss_pred             cEecceeeEECCCCCEeccHHHHHHHHHhcccc------cCCCcCCCCCCHHHHHHHHHHhcCCCCc-c-----------
Confidence            35566665411  1223  55666666544321      2345777889999999999998653211 0           


Q ss_pred             HHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHH--HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYR--DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~--~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~  251 (435)
                                    .++ +++  ++|+|+++|+.++++++.  ++|+.        |++++|+|+.+...++..|++++.
T Consensus        90 --------------~~~-~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~--------Vlv~~P~y~~~~~~~~~~g~~~v~  146 (396)
T PRK09257         90 --------------LAA-GRVATVQTPGGTGALRVGADFLKRAFPDAK--------VWVSDPTWPNHRAIFEAAGLEVKT  146 (396)
T ss_pred             --------------ccc-CeEEEEecCCccHHHHHHHHHHHHhCCCCe--------EEECCCCcccHHHHHHHcCCcEEE
Confidence                          122 255  999999999999997763  57776        999999999999999999999999


Q ss_pred             Eec-C-CCccccHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        252 IRL-T-SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       252 vp~-~-~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      +|+ + +++.+|++++++++.   ++++++++++||||||.+   +.+++|+++|++||+++++|++|.++.... +.  
T Consensus       147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~--  223 (396)
T PRK09257        147 YPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EE--  223 (396)
T ss_pred             EeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HH--
Confidence            998 3 457899999999876   346777779999999999   778999999999999999999998875310 00  


Q ss_pred             CCCCCC-CCCC-CCccEEEecCCCCCCc-cCCcEEEEE
Q psy10210        324 YPLPPF-DFSL-PGVTSISVDTHKYGFT-PKGSSVVLY  358 (435)
Q Consensus       324 ~~~~~~-d~~~-~gvd~~~~s~hK~~~~-p~g~g~il~  358 (435)
                       ...++ .+.. ..-.+++.|+.|.... ...+|++++
T Consensus       224 -~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~  260 (396)
T PRK09257        224 -DAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV  260 (396)
T ss_pred             -HHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence             00011 1111 1124667789998432 466899764

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.83  E-value=3.2e-19  Score=175.85  Aligned_cols=170  Identities=17%  Similarity=0.172  Sum_probs=132.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++++|.+++ ++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+++++
T Consensus        58 ~lr~~ia~~~~~~~~-~i~~~~G~~~~l~~~~~~l~~~gd~--------v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  128 (346)
T TIGR01141        58 ELKQALADYYGVDPE-QILLGNGSDEIIELLIRAFLEPGDA--------VLVPPPTYSMYEISAKIHGAEVVKVPLDEDG  128 (346)
T ss_pred             HHHHHHHHHhCcChH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence            455666667766554 8999999999999999888766655        9999999999998999999999999998778


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCC-CCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g  335 (435)
                      .+|++++++++++++++|++++|+||||.+.+++++.++|+.+  ++++++|++|+.+...     +   .+.+.. ...
T Consensus       129 ~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~-----~---~~~~~~~~~~  200 (346)
T TIGR01141       129 QLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGE-----P---STLPLLAEYP  200 (346)
T ss_pred             CCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCC-----c---cHHHHHhhCC
Confidence            8999999999888999999999999999999999999998877  9999999999865321     0   011111 112


Q ss_pred             ccEEEecCCCCCCc-cCCcEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYGFT-PKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~~~-p~g~g~il~~~~~~~~~  366 (435)
                      .+++..|++|++.. +.++|+++. ++++.+.
T Consensus       201 ~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~  231 (346)
T TIGR01141       201 NLIVLRTLSKAFGLAGLRIGYAIA-NAEIIDA  231 (346)
T ss_pred             CEEEEehhhHhhhchhhhceeeec-CHHHHHH
Confidence            35667788999522 345799665 4555443

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-18  Score=185.92  Aligned_cols=325  Identities=15%  Similarity=0.121  Sum_probs=213.0

Q ss_pred             hhhchhhHHHHHHHHHHHH----HHHHhh-hhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC
Q psy10210         69 ARKIPAVRKKLEEETGKVA----KLFQDD-IKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY  143 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (435)
                      .|++|...+.+++||+.+.    +++.+. ++... ...-..++|+. .++.++++.+.+...++.. + ....+.+.|.
T Consensus        12 ~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i-~~~~~l~lp~~-~sE~e~~~~~~~la~~N~~-~-~~~ig~G~y~   87 (954)
T PRK05367         12 RRHIGPSAADQQAMLAALGADSLDALIDQAVPASI-RLAEPLDLPAA-LSEAEALAELRAIASKNKV-F-RSYIGQGYYG   87 (954)
T ss_pred             ccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHH-hcCCCCCCCCC-CCHHHHHHHHHHHHhcCCC-C-CcccCCCCCC
Confidence            5788988888999888664    455554 33221 11123467764 8999999999998887543 2 1233333332


Q ss_pred             -ChHh-HHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        144 -YQQD-LVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       144 -g~~~-l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                       -.|. +.+.+.+.-+-+....|++++.+++..+...+.++++++++|++.. ++.++.++|.+...++.+.+-...   
T Consensus        88 ~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~a-naSl~d~aTAa~ea~~~a~~~~~~---  163 (954)
T PRK05367         88 THTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIA-NASLLDEATAAAEAMALAKRVSKS---  163 (954)
T ss_pred             CcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChh-hccccccHHHHHHHHHHhhhhccC---
Confidence             2555 4355554322222336999999999999999999999999999876 899999999999988877642211   


Q ss_pred             CCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        222 GISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       222 g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                        ++++|++++..|++....    ++..|++++.+|.+.+    ++      ++++.++++.+|++ +|.+.|+++|+++
T Consensus       164 --~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~------~~~~~~vlvq~p~~-~G~i~d~~~i~~~  230 (954)
T PRK05367        164 --KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD------HDDVFGVLLQYPGT-SGEVRDYTALIAA  230 (954)
T ss_pred             --CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC------cccEEEEEEecCCC-CeeeccHHHHHHH
Confidence              035699999999996654    4667999999997542    11      34677777777755 9999999999999


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccC-----CcEEEEEeCCccccccccccC
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK-----GSSVVLYRDLKYKHCQYFVTS  372 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~-----g~g~il~~~~~~~~~~~~~~~  372 (435)
                      |+++|+++++|+.+.....           ..+....|+|+++.++|||| .|.     ++|++.++++ +.+.......
T Consensus       231 ah~~Gal~~vda~~~Al~~-----------l~~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~-~~r~lpgriv  297 (954)
T PRK05367        231 AHARGALVAVAADLLALTL-----------LTPPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDA-YKRSMPGRIV  297 (954)
T ss_pred             HHHcCCEEEEEehhhhccC-----------CCChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHH-HHhhCCCCee
Confidence            9999999999996633322           12456779999999999994 443     5999888764 3332211111


Q ss_pred             CC----CCCC-CC----C-----CccccCCCch---HHHHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        373 DW----PGGN-YG----S-----PSVSGSRSGG---IIATCWA--AMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       373 ~~----~gg~-~~----~-----~~~~gsr~~~---~ia~~~a--~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .|    .|.. |.    +     .-..++.+..   .+.+..+  .+.++|.+|+.+..+++...+.++.++|.
T Consensus       298 G~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~  371 (954)
T PRK05367        298 GVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLR  371 (954)
T ss_pred             eeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            22    1211 10    0     0000111111   1112222  24667888888877777777666666554

>PRK09105 putative aminotransferase; Provisional

Probab=99.83  E-value=6.9e-19  Score=174.86  Aligned_cols=169  Identities=17%  Similarity=0.089  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      .++++.+++.+|.+++ +|++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|.+++
T Consensus        81 ~~Lr~aia~~~~v~~e-~I~it~Gs~~ai~~~~~~l~~~gd~--------Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~  151 (370)
T PRK09105         81 DDLRTLFAAQEGLPAD-HVMAYAGSSEPLNYAVLAFTSPTAG--------LVTADPTYEAGWRAADAQGAPVAKVPLRAD  151 (370)
T ss_pred             HHHHHHHHHHhCcChh-hEEEcCChHHHHHHHHHHHcCCCCE--------EEEeCCChHHHHHHHHHcCCeEEEecCCCC
Confidence            3455556666676665 8999999999999999999877776        999999999999999999999999999877


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      +.+|++++++. .++++++++++||||||.+-+.+++.++++.  +++++++||+|..|..      +  ....++....
T Consensus       152 ~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~------~--~s~~~~~~~~  222 (370)
T PRK09105        152 GAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD------A--PSVVDLVAQR  222 (370)
T ss_pred             CCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc------C--cchHHHHhhC
Confidence            88999999877 5678999999999999999777777766653  4899999999976531      0  0112222223


Q ss_pred             cc-EEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210        336 VT-SISVDTHKYGFTP--KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd-~~~~s~hK~~~~p--~g~g~il~~~~~~~~~  366 (435)
                      .+ ++..|++|. +|.  ..+|+++ .++++.+.
T Consensus       223 ~~vi~~~SfSK~-~g~~GlRiG~~v-~~~~~i~~  254 (370)
T PRK09105        223 KDLIVLRTFSKL-YGMAGMRLGLAA-ARPDLLAK  254 (370)
T ss_pred             CCEEEEecccHh-hcCCccceeeee-cCHHHHHH
Confidence            34 444578898 444  4489966 44555443

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.83  E-value=2.3e-19  Score=181.96  Aligned_cols=223  Identities=13%  Similarity=0.075  Sum_probs=157.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCC---CC--CCCCcccccccCChHhHHHHHHHHHHhhcCCC-CCCCCcChhHHHHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGH---YD--WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTN-PLHPDIFPGVCKMEAE  179 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~---~~--~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~-~~~~~~~~~~~~~e~~  179 (435)
                      +.-++.+..+++.+.+.+......   ..  -......|..+.|.+++|+++++.+.++.... ++              
T Consensus        53 ~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v--------------  118 (447)
T PLN02607         53 GLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARF--------------  118 (447)
T ss_pred             echhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCc--------------
Confidence            445555666677776665432110   00  01112335567789999999999998753221 11              


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC--C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT--S  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~--~  256 (435)
                                 ++ +++++|+|+++++.+++.+++++++.        |++++|.|+.+...+. ..|++++.|+++  +
T Consensus       119 -----------~p-~~Ivit~G~t~al~~l~~~l~~pGD~--------Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~  178 (447)
T PLN02607        119 -----------DP-DRIVLTAGATAANELLTFILADPGDA--------LLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSN  178 (447)
T ss_pred             -----------CH-HHeEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCcEEEEEeCCCCC
Confidence                       33 38999999999999999999988887        9999999999988776 579999999986  3


Q ss_pred             CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC-
Q psy10210        257 SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL-  326 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~-  326 (435)
                      ++.+|++++++++.+      +++++++++|+||||.+   +.+++|.++|++|++++|+||+|+.+++.  + ..+.. 
T Consensus       179 ~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~--~-~~f~S~  255 (447)
T PLN02607        179 NFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFS--A-SEFVSV  255 (447)
T ss_pred             CCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccC--C-CCcccH
Confidence            467899999998864      78999999999999999   56899999999999999999999886542  0 00000 


Q ss_pred             CC----CCCCC-CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        327 PP----FDFSL-PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       327 ~~----~d~~~-~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ..    .+... ..-..+..|+.|..+ .+..+|+++..++.+..
T Consensus       256 ~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~  300 (447)
T PLN02607        256 AEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT  300 (447)
T ss_pred             HHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHH
Confidence            00    00001 122355678899743 45778997765655543

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=8.9e-19  Score=173.19  Aligned_cols=167  Identities=16%  Similarity=0.159  Sum_probs=124.7

Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cccc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTV  260 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~  260 (435)
                      .+++.++.+++ ++++|+|+++++.+++.++ .+ +.        |++++|+|+.+...++..|++++.+|++.  ++.+
T Consensus        62 ~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~~-~~-~~--------v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  130 (354)
T PRK06358         62 RIASFEQLDLE-NVILGNGATELIFNIVKVT-KP-KK--------VLILAPTFAEYERALKAFDAEIEYAELTEETNFAA  130 (354)
T ss_pred             HHHHHhCCChh-hEEECCCHHHHHHHHHHHh-CC-Cc--------EEEecCChHHHHHHHHHcCCeeEEEeCccccCCCc
Confidence            33333444554 8999999999999999886 22 34        99999999999999999999999999873  4578


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCc
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGV  336 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gv  336 (435)
                      | +++.+.+.++++++++++||||||.+   +.+++|.++|++|++++++|++|..|...     +...+.+.. ....-
T Consensus       131 d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~-----~~~~~~~~~~~~~~~  204 (354)
T PRK06358        131 N-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE-----NETISMINYLENFKN  204 (354)
T ss_pred             c-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC-----ccchhHHHhccCCCC
Confidence            8 66666667789999999999999999   56899999999999999999999887642     111111111 11122


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      .++..|+.|..+ +...+|+++..++.+.+.
T Consensus       205 vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~  235 (354)
T PRK06358        205 LIIIRAFTKFFAIPGLRLGYGLTSNKNLAEK  235 (354)
T ss_pred             EEEEEechhhccCcchhheeeecCCHHHHHH
Confidence            466678999854 457789977666555433

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=5.2e-19  Score=176.17  Aligned_cols=214  Identities=14%  Similarity=0.041  Sum_probs=149.1

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +..+.|.. .+++.+.+.+.+.+.... .    ...| +..|.+++++++++++.+.... ..                 
T Consensus        33 l~~~~~~~-~~~~~~~~~~~~~~~~~~-~----~~~Y-~~~G~~~Lr~aia~~~~~~~~~-~~-----------------   87 (374)
T PRK02610         33 LDTNEFPY-DLPPDLKQKLAWLYQQGI-E----SNRY-PDGGHEALKQAIAEYVNESAAG-SS-----------------   87 (374)
T ss_pred             ecCCCCCC-CCCHHHHHHHHHHHhhcc-c----ccCC-CCCchHHHHHHHHHHhCccccc-cC-----------------
Confidence            44455655 344577888877655321 0    1123 3458899999999988764210 00                 


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-Ccccc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVD  261 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~~~d  261 (435)
                            ..++ +++++|+|+++++.+++.++..+++.       +|++++|+|+.+...++..|++++.+|+++ ++.+|
T Consensus        88 ------~v~~-~~I~it~Ga~~al~~~~~~~~~~g~~-------~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d  153 (374)
T PRK02610         88 ------QITP-ANISVGNGSDELIRSLLIATCLGGEG-------SILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEID  153 (374)
T ss_pred             ------CCCH-HHEEEcCChHHHHHHHHHHHcCCCCC-------eEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCC
Confidence                  0233 38999999999999888877655541       399999999999999999999999999874 57899


Q ss_pred             HHHHHHHhh----cCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        262 LAALQSAIT----GNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       262 ~~~l~~~i~----~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      ++++++++.    .+++++++++||||||.+-+   +++|.++|  +++++|+|++|..|...     . ....+.  ..
T Consensus       154 ~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~-----~-~~~~~~--~~  223 (374)
T PRK02610        154 LAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT-----T-LVGELA--QH  223 (374)
T ss_pred             HHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc-----c-hHHHHh--cC
Confidence            999999886    47899999999999999944   45555544  48999999999877421     0 000111  11


Q ss_pred             CccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      .-.++..|+.|.. .+...+|+++ .++++.+.
T Consensus       224 ~~~ivi~SfSK~~g~~GlRiG~~v-~~~~l~~~  255 (374)
T PRK02610        224 PNWVILRTFSKAFRLAAHRVGYAI-GHPELIAV  255 (374)
T ss_pred             CCEEEEEecchhccCcccceeeee-cCHHHHHH
Confidence            1135667899985 3457789965 45555443

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.82  E-value=1.8e-19  Score=178.66  Aligned_cols=161  Identities=16%  Similarity=0.116  Sum_probs=121.0

Q ss_pred             CCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHH
Q psy10210        189 NGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSA  268 (435)
Q Consensus       189 g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~  268 (435)
                      |.+++ ++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++ ++.+|+++++++
T Consensus        78 ~~~~~-~I~vt~Gs~e~i~~~~~~l~~~gd~--------vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~  147 (366)
T PRK01533         78 HVKME-QVLCGSGLDEVIQIISRAVLKAGDN--------IVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSV  147 (366)
T ss_pred             CCCcc-eEEECCCHHHHHHHHHHHhcCCCCE--------EEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHH
Confidence            34444 8999999999999999999877776        9999999999999999999999999986 456999999999


Q ss_pred             hhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCccEEEecCC
Q psy10210        269 ITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVTSISVDTH  344 (435)
Q Consensus       269 i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd~~~~s~h  344 (435)
                      ++++++++++++||||||.+-+   +++|+++|++++ ++++||+|..|...  +  +.. ..... ...+-.+++.|+.
T Consensus       148 ~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~--~--~~~-~~~~~~~~~~~vi~~~SfS  221 (366)
T PRK01533        148 VDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTA--K--DFP-ETLPLLEKHKNILVLRTFS  221 (366)
T ss_pred             hCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcc--c--cCc-chhHHhccCCCEEEEeCch
Confidence            9889999999999999999955   555555555655 67889999876531  0  000 01111 1122356777899


Q ss_pred             CCCC-ccCCcEEEEEeCCccccc
Q psy10210        345 KYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       345 K~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      |... ++..+|+++ .++++.+.
T Consensus       222 K~~~l~GlRiG~~i-~~~~~~~~  243 (366)
T PRK01533        222 KAYGLASFRVGYAV-GHEELIEK  243 (366)
T ss_pred             HHhcChHHHHhHHh-CCHHHHHH
Confidence            9843 446689855 45665543

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.82  E-value=5.4e-18  Score=182.81  Aligned_cols=261  Identities=14%  Similarity=0.155  Sum_probs=187.1

Q ss_pred             hhhchhhHHHHHHHHHHHH----HHHH-hhhhhcCCCCccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccc
Q psy10210         69 ARKIPAVRKKLEEETGKVA----KLFQ-DDIKQNNAGLEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAV  141 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  141 (435)
                      .|++|...+.+++||+.+.    +++. +.++... ... ...+|+  .+.++.++++.+.+...++.. +. .+.+.+.
T Consensus        37 ~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i-~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~-~~-~fiG~G~  112 (993)
T PLN02414         37 RRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSI-RLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV-FK-SYIGMGY  112 (993)
T ss_pred             hccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHH-hcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc-cc-cccCCCC
Confidence            5899999899999998664    4555 3333322 111 346772  458999999999998876543 22 1222222


Q ss_pred             cC--ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh
Q psy10210        142 YY--YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE  219 (435)
Q Consensus       142 ~~--g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~  219 (435)
                      |.  -++.+.+.+.+..+.+....|++++.+++..+...+.+.++++++|++.. ++.++.++|.+...++.+.+-.   
T Consensus       113 y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~a-naSL~d~aTAaaea~~~a~~~~---  188 (993)
T PLN02414        113 YNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMS-NASLLDEGTAAAEAMAMCNNIL---  188 (993)
T ss_pred             CCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChh-hEeecCChHHHHHHHHHHHhcc---
Confidence            22  24455477777665444446999999999999999999999999999876 8999999999999888776421   


Q ss_pred             hcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                       +| ++++|++++..|++....+    +..|++++.+|.+..   +      ...+.+..+++..|++ +|.+.|+++|+
T Consensus       189 -~g-~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~~v~~vlvq~P~~-~G~v~dv~~I~  256 (993)
T PLN02414        189 -KG-KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSGDVCGVLVQYPAT-DGEVLDYAEFV  256 (993)
T ss_pred             -cC-CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccCceEEEEEecCCC-CeEEcCHHHHH
Confidence             11 2356999999999976554    456999999987431   1      1123456666667665 99999999999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEEecCCCCCCccCC-----cEEEEEeCCc
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSISVDTHKYGFTPKG-----SSVVLYRDLK  362 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~~s~hK~~~~p~g-----~g~il~~~~~  362 (435)
                      ++|+++|+++++ +|..-...           ++ +....|+|+++.++|||| +|.|     +|++.++++-
T Consensus       257 ~~ah~~GaL~iV-aad~lal~-----------~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~  316 (993)
T PLN02414        257 KNAHANGVKVVM-ATDLLALT-----------MLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY  316 (993)
T ss_pred             HHHHHcCCEEEE-EECHHHhc-----------CCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHH
Confidence            999999999999 55432221           23 356679999999999997 5544     7997777653

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.82  E-value=3.9e-18  Score=162.80  Aligned_cols=300  Identities=17%  Similarity=0.199  Sum_probs=218.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHhCCCCCCCCCccc-c-cccCChHhHHHHHHHHHHhhcCCCCCCCCc-ChhHHHHHHHHHHH
Q psy10210        107 LPSQGRNRLEILELVSNYLARGHYDWKHGRVS-G-AVYYYQQDLVDLLTEVFGLTSYTNPLHPDI-FPGVCKMEAEVIKM  183 (435)
Q Consensus       107 ~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~  183 (435)
                      .|....++.++++.+.+..+++.. -..+... | +...-+|.+....+ .+..+...+|++|+. .++..++..++.+|
T Consensus        40 ~~~Pe~SE~e~~Rh~~rLs~kn~a-vd~~m~PLGSCTMK~Np~~e~~~~-~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~  117 (496)
T COG1003          40 PPLPEHSETEMVRHYTRLSQKDLA-VDRGMIPLGSCTMKLNPKAEMKPA-TWPEFANIHPFQPEEQVQGYLELIYELQEW  117 (496)
T ss_pred             CCCccccHHHHHHHHHHHHhcccc-cccCccCCcccccccCchhhcccc-cccchhhcCCCCChHHHHHHHHHHHHHHHH
Confidence            344447889999999888776421 1112111 1 11112444433333 344566678888866 48999999999999


Q ss_pred             HHHHhCCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210        184 CARMFNGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD  261 (435)
Q Consensus       184 la~l~g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d  261 (435)
                      ++++.|.+.   +.+. +.|.++=...+.+++.+... +|. .+.++++|+.+|......|.+.|.+|+.|+++++|.+|
T Consensus       118 L~~ITG~Da---vsLQP~AGAqGE~aGll~Ir~YHe~-rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VD  193 (496)
T COG1003         118 LKEITGMDA---VSLQPNAGAQGEYAGLLAIRAYHES-RGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVD  193 (496)
T ss_pred             HHHhcCCce---eeccCCCCcchhhHHHHHHHHHHHH-cCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCcc
Confidence            999999964   3444 56788888888888877766 554 67889999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        262 LAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       262 ~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      +++|+++..+++.++.+++||+ .|.. ++|.+|+++.+++|..|..|.+---.+.      |    .....+.|.|++-
T Consensus       194 lddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~v------G----~~rPGd~G~DV~H  262 (496)
T COG1003         194 LDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIV------G----LARPGDMGFDVVH  262 (496)
T ss_pred             HHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhh------c----cccccccccceEE
Confidence            9999999999999999999988 8999 7899999999999999999998533222      2    2334456899999


Q ss_pred             ecCCCCCCcc-----CCcEEEEEeCCccccccccccCC----CCCCCC----CCC-ccccC----CCchHHHHHHHHHHH
Q psy10210        341 VDTHKYGFTP-----KGSSVVLYRDLKYKHCQYFVTSD----WPGGNY----GSP-SVSGS----RSGGIIATCWAAMMY  402 (435)
Q Consensus       341 ~s~hK~~~~p-----~g~g~il~~~~~~~~~~~~~~~~----~~gg~~----~~~-~~~gs----r~~~~ia~~~a~l~~  402 (435)
                      ++.||++..|     +|+|-|.++. .+...    .|.    ..++.|    ... ++.-+    -++..+..+|+.++.
T Consensus       263 lNLHKTF~iPHGGGGPG~GPvgVk~-~L~pf----LP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~  337 (496)
T COG1003         263 LNLHKTFCIPHGGGGPGAGPVGVKA-HLAPF----LPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRM  337 (496)
T ss_pred             eecccccccCCCCCCCCCCceehHh-hcccc----CCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHH
Confidence            9999985444     5677766663 33322    111    122221    111 11111    123456789999999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +|.+|+++..+.-.-++.+..++|++
T Consensus       338 mG~~GL~~ase~AvLNANYia~rL~~  363 (496)
T COG1003         338 MGADGLKQASEVAVLNANYIARRLKG  363 (496)
T ss_pred             HhHHHHHHHHHHHHHhHHHHHHHhhh
Confidence            99999999999888888888888775

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.82  E-value=2.8e-19  Score=156.91  Aligned_cols=164  Identities=21%  Similarity=0.217  Sum_probs=132.5

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH-HHHHHcCCEEEEEecCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD-KAANYFGMKVKHIRLTS  256 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~-~~~~~~g~~v~~vp~~~  256 (435)
                      .++++.++++++.+. +++++++|||+|+.+++++++.+++.        |+++++.|++.. ..+...|++++.++.+.
T Consensus         3 ~~~~~~l~~~~~~~~-~~~~~~~~~t~a~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~   73 (170)
T cd01494           3 EELEEKLARLLQPGN-DKAVFVPSGTGANEAALLALLGPGDE--------VIVDANGHGSRYWVAAELAGAKPVPVPVDD   73 (170)
T ss_pred             HHHHHHHHHHcCCCC-CcEEEeCCcHHHHHHHHHHhCCCCCE--------EEEeecccceehhhHHHhcCCEEEEeccCC
Confidence            467788999997443 47899999999999999998765444        999999999988 88899999999999875


Q ss_pred             CccccH--HHHHHHh-hcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        257 SYTVDL--AALQSAI-TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       257 ~~~~d~--~~l~~~i-~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++..+.  +.+++.. .++++++++++++|++|...++++|.++|+++|+++|+|++|+++.....        ..+...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~--------~~~~~~  145 (170)
T cd01494          74 AGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAP--------GVLIPE  145 (170)
T ss_pred             CCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccccc--------cccccc
Confidence            443333  3554433 46889999999999999999999999999999999999999998766321        134445


Q ss_pred             CCccEEEecCCCCCCccCCcEEEEEe
Q psy10210        334 PGVTSISVDTHKYGFTPKGSSVVLYR  359 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g~g~il~~  359 (435)
                      .++|+++.|+||++.+ .|+|++++|
T Consensus       146 ~~~d~~~~s~~K~~~~-~~~G~l~~~  170 (170)
T cd01494         146 GGADVVTFSLHKNLGG-EGGGVVIVK  170 (170)
T ss_pred             ccCCEEEEEcccccCC-CceEEEEeC
Confidence            6799999999999644 789997764

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=8.1e-19  Score=173.64  Aligned_cols=168  Identities=17%  Similarity=0.160  Sum_probs=123.6

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~  257 (435)
                      +++.+++.++.+++ ++++|+|+++++.+++.++ .++ .        +++.+|+|..+...++..|++++.+|+++  +
T Consensus        60 lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~l-~~g-~--------viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  128 (356)
T PRK08056         60 LHQALARHHQVPAS-WILAGNGETESIFAVVSGL-KPR-R--------AMIVTPGFAEYRRALQQVGCEIRRYSLREADG  128 (356)
T ss_pred             HHHHHHHHhCcChh-hEEECCCHHHHHHHHHHHh-CCC-C--------EEEeCCCcHHHHHHHHHcCCeEEEEecccccC
Confidence            33344444444554 8999999999999999876 332 3        78889999999999999999999999863  3


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +.+| +++.+.+.++++++++++||||||.+-+   +++|+++|+++++++++|++|.+|...     +....+. +...
T Consensus       129 ~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~-~~~~  201 (356)
T PRK08056        129 WQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPD-----ETGFIPQ-LADN  201 (356)
T ss_pred             CCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc-----chHHHHH-hccC
Confidence            4555 4566667788999999999999999955   888999999999999999999887531     1000011 1122


Q ss_pred             CccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ..++++.|++|+.. ....+|+++..++++.+
T Consensus       202 ~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~  233 (356)
T PRK08056        202 PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVA  233 (356)
T ss_pred             CCEEEEEechhhccCcchhheeeecCCHHHHH
Confidence            35678889999854 33678997765555543

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=7.6e-19  Score=174.09  Aligned_cols=170  Identities=16%  Similarity=0.074  Sum_probs=129.3

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.++++++.+++ ++++|+|+++++.+++.++.++++.        |++++|+|+.+...+...|++++.+|++ ++.
T Consensus        69 lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~--------v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~  138 (359)
T PRK03158         69 LRTKVAKHLGVDEE-QLLFGAGLDEVIQMISRALLNPGTN--------TVMAEPTFSQYRHNAIIEGAEVREVPLK-DGG  138 (359)
T ss_pred             HHHHHHHHhCCCHH-HEEECCCHHHHHHHHHHHHhCCCCE--------EEEcCCCHHHHHHHHHHcCCeEEEEecC-CCC
Confidence            33444444455543 8999999999999999998777766        9999999999999999999999999997 577


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCc
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGV  336 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gv  336 (435)
                      +|+++++++++++++++++++|+||||.+-+.+++.++++.  +|+++|+||+|..+...     +.....+.. ...+.
T Consensus       139 ~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~  213 (359)
T PRK03158        139 HDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTA-----EDYPDTLPLLEKYEN  213 (359)
T ss_pred             cCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCC-----cccccHHHHHHhcCC
Confidence            99999999998899999999999999999888888888876  59999999999887541     100001111 11234


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .++..|+.|..+ ....+|+++. ++++.+
T Consensus       214 vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~  242 (359)
T PRK03158        214 LIVLRTFSKAYGLAALRVGYGIA-SEELIE  242 (359)
T ss_pred             EEEEEechHhhcCcchhhehhcC-CHHHHH
Confidence            567778999842 2355699654 455544

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.81  E-value=1.2e-18  Score=177.89  Aligned_cols=209  Identities=16%  Similarity=0.115  Sum_probs=148.3

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +..+.|+. .+|+.+.+ +.+.+. +.        .|.+..|.+++++++++.+..........+               
T Consensus       105 l~~g~p~~-~~~~~v~e-~~~~~~-~~--------~Y~~~~g~~~lreaia~~~~~~~~~~~~~~---------------  158 (527)
T PRK09275        105 YVRDQLGF-DADEFVYE-LVDGII-GD--------NYPVPDRMLKHTEKIVKDYLRQEMCGGRPP---------------  158 (527)
T ss_pred             hcCCCCCC-CCCHHHHH-HHHHHh-cC--------CCCCCCCCHHHHHHHHHHHHHhhccCCCCC---------------
Confidence            44566765 33555666 444443 21        366778999999999986654211111100               


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHH-----HHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC--EEEEEecC
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKA-----YRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM--KVKHIRLT  255 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a-----~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~--~v~~vp~~  255 (435)
                              ++++++++|+|+++++..++.+     +.++||.        |++++|.|+.+...++..|.  +++.++.+
T Consensus       159 --------~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~--------Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~  222 (527)
T PRK09275        159 --------KGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDK--------IALMTPIFTPYLEIPELPRYDLEVVHINAD  222 (527)
T ss_pred             --------CCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCE--------EEEeCCChHHHHHHHHHcCCCeEEEEeecC
Confidence                    1134899999999999999987     4667776        99999999999999888865  44555544


Q ss_pred             --CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       256 --~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                        .++.+|++++++++++++++|++++||||||.+   +.+++|+++|++  ++++||+|++|+.|...+.       ..
T Consensus       223 ~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~-------s~  295 (527)
T PRK09275        223 EENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFR-------SL  295 (527)
T ss_pred             cccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccccc-------CH
Confidence              358899999999999999999999999999999   568899999965  4999999999998753111       01


Q ss_pred             CCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCC
Q psy10210        329 FDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDL  361 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~  361 (435)
                      ... .+.-.+++.|++|... .+..+|+++..++
T Consensus       296 ~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~  328 (527)
T PRK09275        296 FAV-LPYNTILVYSFSKYFGATGWRLGVIALHED  328 (527)
T ss_pred             HHh-CCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence            111 2234567778899842 3355799766554

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.81  E-value=1.2e-18  Score=173.73  Aligned_cols=163  Identities=20%  Similarity=0.220  Sum_probs=129.0

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~  256 (435)
                      ++++.+++++|.+   .+++|+|||+|+.+++.++ ..++++        |++++++|.++..++...|++++.++++ +
T Consensus        37 ~le~~la~~~g~~---~~v~~~sgt~al~lal~al~~~~Gd~--------Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~  105 (379)
T PRK11658         37 ALEQAFCQLTGNQ---HAIAVSSATAGMHITLMALGIGPGDE--------VITPSLTWVSTLNMIVLLGATPVMVDVDRD  105 (379)
T ss_pred             HHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHcCCCCCCE--------EEECCCcHHHHHHHHHHcCCEEEEEecCCC
Confidence            4444666677664   4688899999999999998 566665        9999999999999999999999999998 4


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      ++.+|+++++++++++|++|+   |+|++|...++++|.++|++||+++|+|++++.+....    |     ......|+
T Consensus       106 ~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~----~-----~~~g~~g~  173 (379)
T PRK11658        106 TLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYK----G-----RHIGARGT  173 (379)
T ss_pred             cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeEC----C-----eecCCCCC
Confidence            567999999999999999887   55569999999999999999999999999997443211    1     11223467


Q ss_pred             cEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        337 TSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      ++++++.+|.+.++.| |+++.+++++.+
T Consensus       174 ~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~  201 (379)
T PRK11658        174 AIFSFHAIKNITCAEG-GLVVTDDDELAD  201 (379)
T ss_pred             EEEeCCCCCcCcccCc-eEEEECCHHHHH
Confidence            8899999998655543 666666666544

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=1.1e-18  Score=172.41  Aligned_cols=162  Identities=15%  Similarity=0.157  Sum_probs=124.2

Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccH
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDL  262 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~  262 (435)
                      .++++++.+++ ++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|+++++.+|+
T Consensus        68 aia~~~~~~~~-~I~it~G~~~al~~~~~~l~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  138 (353)
T PRK05387         68 AIAAYYGLDPE-QVFVGNGSDEVLAHAFLAFFNHDRP--------LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDV  138 (353)
T ss_pred             HHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCH
Confidence            33333444443 8999999999999999999888877        99999999999999999999999999987888999


Q ss_pred             HHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe
Q psy10210        263 AALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV  341 (435)
Q Consensus       263 ~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~  341 (435)
                      +++++    +++++++++||||||.+.+.+++.++++.+ ++++++|++|..|..       ....+. ......+++..
T Consensus       139 ~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~-------~~~~~~-~~~~~~~i~~~  206 (353)
T PRK05387        139 EDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGG-------ESAIPL-IDRYPNLLVVQ  206 (353)
T ss_pred             HHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCC-------cchHHH-HhhCCCEEEEE
Confidence            98864    467899999999999999999999998876 999999999976421       111111 11112367788


Q ss_pred             cCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        342 DTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       342 s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      |++|... ....+|+++ .++++.+.
T Consensus       207 S~SK~~~~~GlR~G~~~-~~~~~~~~  231 (353)
T PRK05387        207 TFSKSRSLAGLRVGFAI-GHPELIEA  231 (353)
T ss_pred             ehhHhhcchhhhceeee-cCHHHHHH
Confidence            9999743 335689955 45555443

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=3.3e-19  Score=176.07  Aligned_cols=170  Identities=16%  Similarity=0.148  Sum_probs=129.1

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                      .++++++++.+|.+++ ++++|+|+++++.+++.++.+++ +.        |++++|+|..+...++..|++++.+|+++
T Consensus        60 ~~l~~~~a~~~g~~~~-~I~~~~Gs~e~i~~~~~~~~~~g~~~--------vli~~P~y~~y~~~~~~~G~~~~~v~~~~  130 (351)
T PRK01688         60 KAVIENYAAYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKDA--------ILYCPPTYGMYSVSAETIGVEIRTVPTLD  130 (351)
T ss_pred             HHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCCE--------EEEcCCCHHHHHHHHHHcCCEEEEeecCC
Confidence            3566677888887765 89999999999999999987665 44        99999999999999999999999999987


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCC-CC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SL  333 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~  333 (435)
                      ++.+|++++++++ +++++|++++||||||.+-+.+++.++++..  ++++|+||+|..|...   .     ...++ ..
T Consensus       131 ~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~---~-----s~~~~~~~  201 (351)
T PRK01688        131 NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQ---A-----SLAGWLAE  201 (351)
T ss_pred             CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCC---C-----ChHHHHhh
Confidence            7899999999988 5899999999999999996666655555432  6889999999877521   0     00111 11


Q ss_pred             CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      .+-.++.-|++|.. .++.++|+++ .++++.+.
T Consensus       202 ~~n~iv~rSfSK~~glaGlRiGy~i-~~~~~i~~  234 (351)
T PRK01688        202 YPHLVILRTLSKAFALAGLRCGFTL-ANEEVINL  234 (351)
T ss_pred             CCCEEEEecchHhhcCHHHHHhHHh-CCHHHHHH
Confidence            12246667899963 2345578855 55555443

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.81  E-value=6.2e-19  Score=173.51  Aligned_cols=292  Identities=18%  Similarity=0.202  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHh----hcC-CCCCCCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210        116 EILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGL----TSY-TNPLHPDIFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~----~~~-~~~~~~~~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      .+++.+.++.+.+...|+-+...++.......+.+...+.+..    ... +..-.-|..-.-.....+..+.+|+.||+
T Consensus         2 Pl~~aL~~y~~~~~~~fh~PGHk~G~~~~~~p~g~~~~~f~G~~~~~~Dl~te~~~lD~L~~p~G~I~eAe~~aA~~fGA   81 (417)
T PF01276_consen    2 PLFEALKKYAEEGPYSFHMPGHKGGRGFDKSPAGRLFYDFFGENLFRADLSTEVPGLDDLHDPEGIIKEAEELAARAFGA   81 (417)
T ss_dssp             HHHHHHHHHHHTT-EESSSSTTTTTTCGGGSHHHHHHHHHH-HHHHHT---TTSTTCBBTTTTBTHHHHHHHHHHHHHTE
T ss_pred             cHHHHHHHHHhCCCceeecCccCCCCCCCcchHHHHHHHHHhhHHHHHHHhhcccccCcccCCccHHHHHHHHHHHhcCC
Confidence            3678888888887777765544443322222334444333321    111 11111111112234566777899999998


Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC----ccccH---
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS----YTVDL---  262 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~----~~~d~---  262 (435)
                      +.  .-++++|+|.+|..++.+++.+++.        |+++..+|-++..++...|+.+++++.. +.    +.+++   
T Consensus        82 d~--t~flvnGsT~g~~a~i~a~~~~gd~--------VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~  151 (417)
T PF01276_consen   82 DK--TFFLVNGSTSGNQAMIMALCRPGDK--------VLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEF  151 (417)
T ss_dssp             SE--EEEESSHHHHHHHHHHHHHTTTTCE--------EEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGG
T ss_pred             Ce--EEEEecCchHHHHHHHHHhcCCCCE--------EEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCCChhhh
Confidence            75  5789999999999999999999888        9999999999999999999999999764 21    24566   


Q ss_pred             --HHHHHHhhcC--c---eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        263 --AALQSAITGN--T---VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       263 --~~l~~~i~~~--~---~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                        +.+++++.++  .   +++++++|++ .|.+.|+++|+++|++++++|+||||+|+... |..      .+-+....|
T Consensus       152 ~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~-F~~------lp~~a~~~g  223 (417)
T PF01276_consen  152 NEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFG-FHP------LPRSALALG  223 (417)
T ss_dssp             SHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGG-CSG------GGTTCSSTT
T ss_pred             hHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEcccccccc-CCC------Cccchhhcc
Confidence              8999999753  3   4499999988 89999999999999999999999999987654 221      123334557


Q ss_pred             cc-------EEEecCCCCCCccCCcEEEEEeCCc-cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh-cHH
Q psy10210        336 VT-------SISVDTHKYGFTPKGSSVVLYRDLK-YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF-GFE  406 (435)
Q Consensus       336 vd-------~~~~s~hK~~~~p~g~g~il~~~~~-~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~-g~~  406 (435)
                      +|       +++.|+||.+.+...++++.+++.. +........-...        ...|++...+|.+-.+.+.+ +.+
T Consensus       224 ad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~--------~TTSPSY~lmASlD~a~~~m~~~~  295 (417)
T PF01276_consen  224 ADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMH--------QTTSPSYPLMASLDVARAQMEEEE  295 (417)
T ss_dssp             SS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHH--------S-SS--HHHHHHHHHHHHHHSHHH
T ss_pred             CccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHH--------cCCChHHHHHHHHHHHHHHHhhhh
Confidence            78       9999999998888999999999986 3222111111100        11355555666666666666 333


Q ss_pred             H--HHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        407 A--QVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       407 g--~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                      |  +.+...+..+.+++.++.+.++..+.
T Consensus       296 G~~l~~~~i~~a~~~R~~i~~~~~~~~~~  324 (417)
T PF01276_consen  296 GRELLEEAIELAEEFRKKINRLNDIWGFK  324 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCT-SSE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCceEe
Confidence            3  22333333444555553335554443

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK08637 hypothetical protein; Provisional

Probab=99.81  E-value=1.8e-18  Score=173.18  Aligned_cols=188  Identities=15%  Similarity=0.103  Sum_probs=138.8

Q ss_pred             CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      ..++|.+..|.+++|+++++.+.....  ...+                       ++.+++++|+|+++++.+++.++.
T Consensus        36 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~-----------------------~~~~~I~it~G~~~al~~~~~~l~   90 (388)
T PRK08637         36 EIFPYAPPQGIPELRDLWQEKMLRENP--SLSG-----------------------KKMSLPIVTNALTHGLSLVADLFV   90 (388)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHhccCc--cccc-----------------------cccceeeEccchHHHHHHHHHHhc
Confidence            356677888999999999988765321  1111                       122478999999999999999998


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC-CCccccHHHHHHHhh----cCceEEEEeCCCCCcccc
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT-SSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~-~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~  288 (435)
                      ++++.        |++++|+|+.+...+. ..|++++.+|+. +++.+|+++++++++    +.+.++++++||||||.+
T Consensus        91 ~~gd~--------Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~  162 (388)
T PRK08637         91 DQGDT--------VLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYT  162 (388)
T ss_pred             CCCCE--------EEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCC
Confidence            88877        9999999999998754 689999999984 556789999999886    456678888999999988


Q ss_pred             ---cCHHHHHHHHHH-----cCCcEEEeccccchhhhcccccCCCCCCC-C-C--CCCCccEE-EecCCC-CCCccCCcE
Q psy10210        289 ---DDIGAIAKLGEK-----YGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D-F--SLPGVTSI-SVDTHK-YGFTPKGSS  354 (435)
Q Consensus       289 ---~~i~~i~~la~~-----~~~~livD~~~~~~~~~~~~~~g~~~~~~-d-~--~~~gvd~~-~~s~hK-~~~~p~g~g  354 (435)
                         +.+++|+++|++     |++++|+||+|.++.+.     +...++. . +  ....+-.+ +.|+.| ++.+...+|
T Consensus       163 ~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~-----~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG  237 (388)
T PRK08637        163 PTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYE-----DSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVG  237 (388)
T ss_pred             CCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccC-----CccchhhHHHhhcccccceEEEeccccccCCCcccceE
Confidence               678888888875     89999999999988652     1111111 1 0  11123223 237778 455557899


Q ss_pred             EEEEeC
Q psy10210        355 VVLYRD  360 (435)
Q Consensus       355 ~il~~~  360 (435)
                      ++++..
T Consensus       238 ~~~~~~  243 (388)
T PRK08637        238 FITFGT  243 (388)
T ss_pred             EEEEcc
Confidence            987653

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.81  E-value=1.5e-18  Score=173.64  Aligned_cols=160  Identities=19%  Similarity=0.210  Sum_probs=127.3

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+   ..+++++|++++.+++.++..+++.        |+++.|.|.+    +...++..|.+++.++.
T Consensus        64 ~Le~~lA~l~g~~---~~v~~~sG~~Ai~~~l~all~pGD~--------Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~  132 (405)
T PRK08776         64 LLGEALAELEGGA---GGVITATGMGAINLVLNALLQPGDT--------LVVPHDAYGGSWRLFNALAKKGHFALITADL  132 (405)
T ss_pred             HHHHHHHHHhCCC---ceEEEcCHHHHHHHHHHHHhCCCCE--------EEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence            3556777778763   2367777799999999999877776        9999999987    44455666888888764


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+....         ..+++   .
T Consensus       133 -----~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~---------~~pl~---~  195 (405)
T PRK08776        133 -----TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL---------QKPLE---F  195 (405)
T ss_pred             -----CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc---------CCccc---c
Confidence                 378999999988999999999999999999999999999999999999999964321         12333   4


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      |+|+.+.|.||++.++.+  .|+++.+++++.+.
T Consensus       196 gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~  229 (405)
T PRK08776        196 GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ  229 (405)
T ss_pred             cCCEEEecCceeecCCCCceEEEEEeCCHHHHHH
Confidence            889999999999766654  47767777766543

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.81  E-value=2.8e-18  Score=173.45  Aligned_cols=225  Identities=14%  Similarity=0.039  Sum_probs=148.2

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH-----HHHHcC
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK-----AANYFG  246 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~-----~~~~~g  246 (435)
                      ...++|..+++.+++++|.+.. +++++ +||+|+..++.++.++++.        |+++.++|.++..     .+...|
T Consensus        68 ~~~~~e~~~~~~la~~~g~~~~-~i~~~-sgt~al~~~l~~l~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~~~g  137 (416)
T PRK00011         68 YVDVVEQLAIDRAKELFGAEYA-NVQPH-SGSQANAAVYFALLKPGDT--------ILGMDLAHGGHLTHGSPVNFSGKL  137 (416)
T ss_pred             HHHHHHHHHHHHHHHHhCCCce-eeecC-CchHHHHHHHHHhcCCCCE--------EEEeccccCCccccccccccccce
Confidence            4556666678899999998764 45554 5688999999998777766        9999999976432     122346


Q ss_pred             CEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        247 MKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       247 ~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      ++++.+|++ +++.+|++++++++++ ++++++++++++  |...++++|.++|++||+++|+|++|+.+....    | 
T Consensus       138 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~----g-  210 (416)
T PRK00011        138 YNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA----G-  210 (416)
T ss_pred             eeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCccCHHHHHHHHHHcCCEEEEECcchhccccc----C-
Confidence            788888887 4688999999999975 788888876544  566799999999999999999999986433210    1 


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                       ..+.++.  ++|+++.|+||++.||.| |+++++++++.+........+.   +      ++.....+++..+++....
T Consensus       211 -~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~~~---~------~~~~~~~~aa~~~a~~~~~  277 (416)
T PRK00011        211 -VHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFPGI---Q------GGPLMHVIAAKAVAFKEAL  277 (416)
T ss_pred             -ccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCccc---c------CCccHHHHHHHHHHHHHHH
Confidence             1122332  689999999998666665 6767766665543211111111   1      1122223344444444433


Q ss_pred             H---HHHHHHHHHHHHHHHHHHHhc
Q psy10210        405 F---EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       405 ~---~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .   +.+.++.+++.+.+.+.++++
T Consensus       278 ~~~~~~~~~~~~~~~~~l~~~L~~~  302 (416)
T PRK00011        278 EPEFKEYAQQVVKNAKALAEALAER  302 (416)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhC
Confidence            3   344555555555566655553

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=5e-19  Score=175.01  Aligned_cols=168  Identities=20%  Similarity=0.179  Sum_probs=126.5

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      +++.+++.+|.+++ ++++|+|+++++.+++.++..++ +.        |++++|+|+.+...++..|++++.+|+++++
T Consensus        65 Lr~aia~~~~~~~~-~I~it~Gs~~~i~~~~~~~~~~g~d~--------vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~  135 (354)
T PRK04635         65 LINAYSAYAGVAPE-QILTSRGADEAIELLIRAFCEPGQDS--------IACFGPTYGMYAISAETFNVGVKALPLTADY  135 (354)
T ss_pred             HHHHHHHHhCcCHH-HEEEeCCHHHHHHHHHHHhcCCCCCe--------EEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence            44455555566665 89999999999999999988776 55        9999999999999999999999999998778


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      .+|++.+++ + +++++|++++||||||.+-+.+++.++++.. ++++++|++|..|...   . .  ...+...... -
T Consensus       136 ~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~---~-s--~~~~~~~~~~-~  206 (354)
T PRK04635        136 QLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE---Y-S--VADLLASYPN-L  206 (354)
T ss_pred             CCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC---c-c--hHHHHhhCCC-E
Confidence            899998873 4 6899999999999999998888888888763 6999999999876421   0 0  0011001112 3


Q ss_pred             EEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        338 SISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ++..|++|+.+ ++.++|+++. ++++.+.
T Consensus       207 iv~~S~SK~~~l~GlRlG~~i~-~~~~~~~  235 (354)
T PRK04635        207 VVLRTLSKAFALAGARCGFTLA-NEELIEI  235 (354)
T ss_pred             EEEechHHHhhhhHHHHhhhhC-CHHHHHH
Confidence            55678999832 3455799654 5555543

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.81  E-value=2.7e-18  Score=172.71  Aligned_cols=201  Identities=15%  Similarity=0.140  Sum_probs=140.1

Q ss_pred             hHhHHHHHHHHHH-hhcCCCCCCC--CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        145 QQDLVDLLTEVFG-LTSYTNPLHP--DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       145 ~~~l~~~i~~~~~-~~~~~~~~~~--~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                      .|.+++++.+.+. ++..+++.+.  ...+...+++..+++.+++++|.+.. .++++ ||++|+..++.++.++++.  
T Consensus        32 ~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~-~v~~~-sgt~a~~~~l~~l~~~Gd~--  107 (402)
T cd00378          32 SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA-NVQPH-SGSQANLAVYFALLEPGDT--  107 (402)
T ss_pred             CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce-eeecC-CcHHHHHHHHHHhcCCCCE--
Confidence            4556666554432 2222222222  12345566776678888999998753 45544 5789999999999877776  


Q ss_pred             CCCCCeEEEeCCCchhHHHH-----HHHcCCEEEEEecC-C--CccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHH
Q psy10210        222 GISLPEIVLPTTAHPAFDKA-----ANYFGMKVKHIRLT-S--SYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIG  292 (435)
Q Consensus       222 g~~~~~viv~~~~~~~~~~~-----~~~~g~~v~~vp~~-~--~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~  292 (435)
                            |++++|+|+++...     ++..|.+++.++++ +  ++.+|++++++++. ++++++++++++||  ...+++
T Consensus       108 ------Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~  179 (402)
T cd00378         108 ------IMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFK  179 (402)
T ss_pred             ------EEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHH
Confidence                  99999999875433     56678888777765 2  68899999999985 57899998888775  567999


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      +|+++|++||+++|+|++|......    .|.  .+.++.  ++|+++.|+||++.||.| |+++++++++.+.
T Consensus       180 ~I~~l~~~~~~~li~D~a~~~g~~~----~g~--~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~  244 (402)
T cd00378         180 RFREIADEVGAYLLVDMAHVAGLVA----GGV--FPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKK  244 (402)
T ss_pred             HHHHHHHhcCCEEEEEccchhhhhh----ccc--CCCccc--CCcEEEeccccCCCCCCc-eEEEeccHHHHHH
Confidence            9999999999999999996332221    021  122222  679999999998656665 6667766455443

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.81  E-value=4.4e-19  Score=175.90  Aligned_cols=208  Identities=15%  Similarity=0.178  Sum_probs=151.5

Q ss_pred             CHHHHHHHHHH-HHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        113 NRLEILELVSN-YLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       113 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      .+.++++++.+ ....      .....|....|.+++++++++++...... +                         .+
T Consensus        19 ~~~~~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~-~-------------------------~~   66 (363)
T PF00155_consen   19 PPPAAIKAAIRGAATS------SSFLGYPPPQGYPELREAIADFLGRRYGV-P-------------------------VD   66 (363)
T ss_dssp             HHHHHHHHHHHHHHHH------TGCTSSTCTTHHHHHHHHHHHHHHHHHTH-H-------------------------TT
T ss_pred             chHHHHHHHHHHhhcc------cccccCCCchhhHHHHHHHHHHhhhccCc-c-------------------------cc
Confidence            44555555554 2222      23556778888999999999998842211 1                         12


Q ss_pred             CCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHH
Q psy10210        192 PETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSA  268 (435)
Q Consensus       192 ~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~  268 (435)
                      ++.++++++|+++++..+...+ .++++.        |++++|+|+.+...++..|++++.+|++  .++.+|++++++.
T Consensus        67 ~~~~i~~~~G~~~~~~~~~~~~~~~~~~~--------vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  138 (363)
T PF00155_consen   67 PEANILVTSGAQAALFLLLRLLKINPGDT--------VLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEA  138 (363)
T ss_dssp             GGEGEEEESHHHHHHHHHHHHHHSSTTSE--------EEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHH
T ss_pred             cceEEEEecccccchhhhhhccccccccc--------ceecCCccccccccccccCceeeeccccccccccccccccccc
Confidence            3237888888888888888777 345555        9999999999999999999999999975  6788999999999


Q ss_pred             hhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCc-c
Q psy10210        269 ITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGV-T  337 (435)
Q Consensus       269 i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gv-d  337 (435)
                      +++      +++++++++|+||||.+   +++++|+++|++||+++++|++|+.+...-.   ++.  + ......+. .
T Consensus       139 l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~--~~~~~~~~~~~v  213 (363)
T PF00155_consen  139 LDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP---DFG--PIRSLLDEDDNV  213 (363)
T ss_dssp             HHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS---HTH--HHHGHHTTTSTE
T ss_pred             cccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCC---ccC--cccccccccccc
Confidence            987      67899999999999998   6677777779999999999999998866310   000  0 11112222 4


Q ss_pred             EEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        338 SISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      +++.|++|..+ ....+|+++. ++++.+.
T Consensus       214 i~~~S~SK~~g~~GlRvG~i~~-~~~~~~~  242 (363)
T PF00155_consen  214 IVVGSLSKSFGLPGLRVGYIVA-PPELIER  242 (363)
T ss_dssp             EEEEESTTTTTSGGGTEEEEEE-EHHHHHH
T ss_pred             eeeeeccccccccccccccccc-hhhhhhh
Confidence            77789999743 3356899777 5555544

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.81  E-value=7.5e-19  Score=174.52  Aligned_cols=158  Identities=20%  Similarity=0.204  Sum_probs=126.3

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLT  255 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~  255 (435)
                      +.+.+|++.|.   +++++|+||++|+.+++.++.++++.        |+++.+.|.+....    ....|++++.++. 
T Consensus        58 Le~~lA~leg~---e~ivvt~gg~~Ai~~~l~all~~Gd~--------Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-  125 (388)
T PRK08861         58 LEQTLSELESG---KGAVVTNCGTSALNLWVSALLGPDDL--------IVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-  125 (388)
T ss_pred             HHHHHHHHhCC---CeEEEECCHHHHHHHHHHHHcCCCCE--------EEEcCCchHHHHHHHHHHHhcCCeEEEEECC-
Confidence            44566777764   37999999999999999998877766        99999999874433    3334677777752 


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                          .|+++++++++++|++|++++|+||||.+.++++|.++|+++|+++++|++|+....         ..|++   .|
T Consensus       126 ----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~---------~~pl~---~G  189 (388)
T PRK08861        126 ----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL---------QKPLE---LG  189 (388)
T ss_pred             ----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc---------CCCcc---cC
Confidence                488999999999999999999999999999999999999999999999999975432         12443   48


Q ss_pred             ccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      +|+++.|+|||+.|+.+  .|+++.+++++.+
T Consensus       190 aDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~  221 (388)
T PRK08861        190 ADFVIHSTTKYINGHSDVIGGVLITKTKEHAE  221 (388)
T ss_pred             CCEEEeecceeccCCCcceeEEEEecHHHHHH
Confidence            99999999999877765  4666666655543

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=2.9e-18  Score=171.11  Aligned_cols=169  Identities=16%  Similarity=0.027  Sum_probs=133.1

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++++|.+++ ++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|.++++
T Consensus        90 ~lr~~ia~~~~~~~~-~I~~t~Ga~~~i~~~~~~~~~~gd~--------Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~  160 (380)
T PLN03026         90 RLRAALAEDSGLESE-NILVGCGADELIDLLMRCVLDPGDK--------IIDCPPTFGMYVFDAAVNGAEVIKVPRTPDF  160 (380)
T ss_pred             HHHHHHHHHhCcChh-hEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence            466667777777665 8999999999999999998777766        9999999999999999999999999988778


Q ss_pred             cccHHHHHHHh-hcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        259 TVDLAALQSAI-TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       259 ~~d~~~l~~~i-~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      .+|++++++++ ++++++|++++||||||.+-+.+++.++++.. +++++||+|..|...     +..  ........-.
T Consensus       161 ~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-----~~~--~~~~~~~~~v  232 (380)
T PLN03026        161 SLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-----ESR--MKWVKKYDNL  232 (380)
T ss_pred             CcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-----cch--HHHHHhCCCE
Confidence            89999999998 67899999999999999999999999999764 899999999877431     100  0011112335


Q ss_pred             EEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        338 SISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ++..|++|..+ ++.++|+++ .++++.+
T Consensus       233 iv~~SfSK~~glaGlRiGy~~-~~~~~i~  260 (380)
T PLN03026        233 IVLRTFSKRAGLAGLRVGYGA-FPLSIIE  260 (380)
T ss_pred             EEEecchHhhcCccccceeee-cCHHHHH
Confidence            67788999732 445679855 4455543

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.81  E-value=8.6e-19  Score=176.39  Aligned_cols=192  Identities=11%  Similarity=0.077  Sum_probs=139.9

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceE--EcCChHHHHHHHHH--
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGC--MTSGGTESIMMACK--  211 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~--~t~ggteai~~a~~--  211 (435)
                      ...|.+..|.+++|+++++++...... .                         .+++ +++  .|.|+++|+.+++.  
T Consensus        65 ~~~Y~~~~G~~~lR~aia~~~~~~~~~-~-------------------------~~~~-~v~~~~t~G~~~al~~~~~~l  117 (404)
T PTZ00376         65 DKEYLPIEGLQSFIEAAQKLLFGEASY-A-------------------------LAEK-RIATVQALSGTGALRLGFEFL  117 (404)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhcCCCcc-c-------------------------cccC-eEEEeeccCcchHHHHHHHHH
Confidence            466778889999999999988543111 1                         1233 677  58999999988876  


Q ss_pred             -HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210        212 -AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAIT---GNTVMLVGSMPNFPY  285 (435)
Q Consensus       212 -a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt  285 (435)
                       ++.++|+.        |++++|+|+.+...++..|++++.+|+.  +++.+|++.+++++.   ++++++++++|||||
T Consensus       118 ~~~~~~Gd~--------Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPT  189 (404)
T PTZ00376        118 KRFLPAGTT--------VYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPT  189 (404)
T ss_pred             HHhcCCCCE--------EEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence             44556665        9999999999999999999999999983  457899999999885   346788889999999


Q ss_pred             ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEE--Ee
Q psy10210        286 GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVL--YR  359 (435)
Q Consensus       286 G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il--~~  359 (435)
                      |.+   +++++|+++|++|++++++|++|..+..............++. ...-.++..|++|... ....+|+++  +.
T Consensus       190 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~  268 (404)
T PTZ00376        190 GVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE-RGVEFLVAQSFSKNMGLYGERIGALHIVCA  268 (404)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh-cCCcEEEEEeCCCcccccccccceEEEEeC
Confidence            999   6788999999999999999999988765210000000001110 1112466678999854 346789974  45


Q ss_pred             CCcc
Q psy10210        360 DLKY  363 (435)
Q Consensus       360 ~~~~  363 (435)
                      ++++
T Consensus       269 ~~~~  272 (404)
T PTZ00376        269 NKEE  272 (404)
T ss_pred             CHHH
Confidence            6553

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.80  E-value=4.3e-18  Score=170.80  Aligned_cols=251  Identities=11%  Similarity=0.025  Sum_probs=165.9

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|.+.+++.+.+...... ...+....+..++..++++++++++|.+  +++++|+| ++++..++.++.++++.     
T Consensus        58 ~~~i~~a~~~~~~~~~~~-~~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~~~~~~~l~~~gd~-----  128 (397)
T PRK06939         58 HPELIAAAKAALDSHGFG-MASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSC-FDANGGLFETLLGKEDA-----  128 (397)
T ss_pred             CHHHHHHHHHHHHHcCCC-CcccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHHHHHHHHhCCCCCE-----
Confidence            567777777777653221 1122223456677788888899988864  36777776 88999999888777766     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                         |++++|+|+++...++..|++++.++.     .|++++++.+++      ++++|+..+..|++|..+++++|.++|
T Consensus       129 ---vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la  200 (397)
T PRK06939        129 ---IISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLA  200 (397)
T ss_pred             ---EEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHH
Confidence               999999999999999999998887764     478888887763      678888888899999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      ++||+++|+|++|+.+...   ..+.+.. ..+. ..++|+++.|+||++.++ ..|+++. ++++.+........+.  
T Consensus       201 ~~~~~~li~De~~~~g~~~---~~~~~~~~~~~~-~~~~~i~~~S~sK~~~g~-r~G~v~~-~~~~~~~l~~~~~~~~--  272 (397)
T PRK06939        201 DKYDALVMVDDSHAVGFVG---ENGRGTVEHFGV-MDRVDIITGTLGKALGGA-SGGYTAG-RKEVIDWLRQRSRPYL--  272 (397)
T ss_pred             HHhCCEEEEECcccccCcC---CCCCCHHHHcCC-CCCCcEEEEECHHHhCcc-CceEEEe-CHHHHHHHHHhCcccc--
Confidence            9999999999999632221   1111000 1111 235789999999996455 4588554 4555443211111111  


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                            ..++......+++.++++.+.. +...++.++..+.+.+.++.+
T Consensus       273 ------~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~  316 (397)
T PRK06939        273 ------FSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA  316 (397)
T ss_pred             ------ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                  1122223333445555555422 345566666666666666554

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.80  E-value=3.8e-18  Score=172.49  Aligned_cols=226  Identities=15%  Similarity=0.164  Sum_probs=148.3

Q ss_pred             CCccccCCCCCCCCHHHH-HHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEI-LELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      .+.+..+.|.....+.+. .+.+.+.+....  .......|....|.+++|+++++++..+....               
T Consensus        32 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~---------------   94 (416)
T PRK09440         32 AIMLGGGNPAHIPEMEDYFRDLLADLLASGK--LTEALGNYDGPQGKDELIEALAALLNERYGWN---------------   94 (416)
T ss_pred             ceeccCCCCCccCCHHHHHHHHHHHHhcCcc--cccccccCCCCCCCHHHHHHHHHHHHHHhCCC---------------
Confidence            355666777753444444 444444443211  11223457777899999999999987643221               


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEE-eCCCchhHHHHHHHcCC----EEEEEe
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVL-PTTAHPAFDKAANYFGM----KVKHIR  253 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv-~~~~~~~~~~~~~~~g~----~v~~vp  253 (435)
                                 .++ ++|++|+|+++++.+++.++.+++..   .+++.|++ .+|+|+.+...+...+.    ....++
T Consensus        95 -----------v~~-~~I~it~Ga~~al~~~~~~l~~~~~~---~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~  159 (416)
T PRK09440         95 -----------ISP-QNIALTNGSQSAFFYLFNLFAGRRAD---GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIEL  159 (416)
T ss_pred             -----------CCh-hhEEEccChHHHHHHHHHHHhccccC---CCCCeEEEecCCCchhhHHHhhccCceeeccccccc
Confidence                       233 38999999999999999998753110   01234999 69999999887664442    223334


Q ss_pred             cCC---CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        254 LTS---SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       254 ~~~---~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.   ++.+|+++++  +.++++++++++||||||.+   +.+++|+++|++|++++|+|++|+.+.... ...     
T Consensus       160 ~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~-----  231 (416)
T PRK09440        160 LPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFS-----  231 (416)
T ss_pred             ccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chh-----
Confidence            432   3578999987  46678999999999999999   668899999999999999999997532110 000     


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      .......+-.++..|++|++.+...+|+++ .++++.+.
T Consensus       232 ~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i-~~~~l~~~  269 (416)
T PRK09440        232 EATPLWNPNIILCMSLSKLGLPGVRCGIVI-ADEEIIEA  269 (416)
T ss_pred             hcCccccCCeEEEecccccCCCcceEEEEe-CCHHHHHH
Confidence            000001123466678999866667899955 45555443

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.80  E-value=5.5e-18  Score=170.87  Aligned_cols=213  Identities=11%  Similarity=0.023  Sum_probs=149.2

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|+.+ +++.+.+.+.+.+......  .....|.+..|.+++++++++++...... .                
T Consensus        37 i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~-~----------------   96 (409)
T PRK07590         37 IRLGIGDVTQP-LPPAVIEAMHKAVDEMGTA--ETFRGYGPEQGYDFLREKIAENDYQARGC-D----------------   96 (409)
T ss_pred             EEecCcCCCCC-CCHHHHHHHHHHHhccccc--CCccCCCCCCCCHHHHHHHHHHHHHhcCC-c----------------
Confidence            45556667763 4456777777766542111  12456667789999999999987653221 1                


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE-----------E
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK-----------V  249 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~-----------v  249 (435)
                               .++ +++++|+|+++++.+++ .+.++++.        |++++|+|+.+...++..|.+           +
T Consensus        97 ---------~~~-~~I~it~Ga~~al~~l~-~~~~~gd~--------V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~  157 (409)
T PRK07590         97 ---------ISA-DEIFISDGAKCDTGNIL-DIFGPDNT--------IAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGI  157 (409)
T ss_pred             ---------CCh-hhEEECCCHHHHHHHHH-HhcCCCCE--------EEEeCCCCcchHHHHHHcCCcccccccccccce
Confidence                     234 38999999999999865 44456665        999999999999999999987           8


Q ss_pred             EEEecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        250 KHIRLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       250 ~~vp~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +.+|++.  ++..|++      .+++++|++++||||||.+   +.+++|+++|++||++|++||+|+.+...     +.
T Consensus       158 ~~v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-----~~  226 (409)
T PRK07590        158 VYLPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD-----PS  226 (409)
T ss_pred             eEeecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC-----CC
Confidence            8999873  2334432      2578999999999999999   67889999999999999999999987541     11


Q ss_pred             CCCCC-CCCC-CCccEEEecCCCCC-CccCCcEEEEEeCCccc
Q psy10210        325 PLPPF-DFSL-PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       325 ~~~~~-d~~~-~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~  364 (435)
                      ..+++ .+.. .+..++..|+.|.. .+...+|+++.. +++.
T Consensus       227 ~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~-~~li  268 (409)
T PRK07590        227 LPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP-KELK  268 (409)
T ss_pred             CCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC-HHHh
Confidence            11111 1111 12345567899985 355778996654 4443

>PRK03321 putative aminotransferase; Provisional

Probab=99.80  E-value=2e-18  Score=170.62  Aligned_cols=172  Identities=16%  Similarity=0.093  Sum_probs=130.5

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.++++++.+++ ++++|+|+++++..++.++.++++.        |+++.|+|..+...++..|++++.+|+++++.
T Consensus        62 lr~~ia~~~~~~~~-~I~~~~G~~~~l~~~~~~~~~~gd~--------Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  132 (352)
T PRK03321         62 LRAALAEHLGVPPE-HVAVGCGSVALCQQLVQATAGPGDE--------VIFAWRSFEAYPILVQVAGATPVQVPLTPDHT  132 (352)
T ss_pred             HHHHHHHHhCcCHH-HEEECCCHHHHHHHHHHHhcCCCCE--------EEeCCCCHHHHHHHHHHcCCEEEEccCCCCCC
Confidence            34444455554543 8999999999999999888777766        99999999999889999999999999986678


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCCCCC-Cc
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-GV  336 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-gv  336 (435)
                      +|+++++++++++++++++++|+||||.+-+.+++.++|++  +++++++|++|+++...     +.....+..... .-
T Consensus       133 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~  207 (352)
T PRK03321        133 HDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRD-----DDVPDGLELVRDHPN  207 (352)
T ss_pred             CCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccC-----cCCCcHHHHHhhCCC
Confidence            99999999998899999999999999999999999999987  59999999999987641     110011111111 22


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      .+++.|+.|..+ ....+|+++. ++++.+.
T Consensus       208 vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~  237 (352)
T PRK03321        208 VVVLRTFSKAYGLAGLRVGYAVG-HPEVIAA  237 (352)
T ss_pred             EEEEecchHHhhhHHHhhhhhcC-CHHHHHH
Confidence            355568899843 2345889654 4555543

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.80  E-value=5.5e-18  Score=167.30  Aligned_cols=231  Identities=17%  Similarity=0.157  Sum_probs=150.5

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ..++++.+++++|.+   ++++++|||+|+.+++.++. .+++.        |+++.++|.++..++...|++++.++++
T Consensus        20 ~~~~~~~la~~~~~~---~~~~~~sgt~al~~~l~~l~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (352)
T cd00616          20 VREFEKAFAEYLGVK---YAVAVSSGTAALHLALRALGIGPGDE--------VIVPSFTFVATANAILLLGATPVFVDID   88 (352)
T ss_pred             HHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHcCCCCCCE--------EEeCCcchHHHHHHHHHcCCeEEEEecC
Confidence            345556777888752   57888899999999999873 45544        9999999999999999999999999998


Q ss_pred             C-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        256 S-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       256 ~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      + ++.+|++++++++++++++|++++   ++|.+.++++|.++|+++|+++|+|++|+.+....    +.   +..   .
T Consensus        89 ~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~----~~---~~~---~  155 (352)
T cd00616          89 PDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYK----GR---KVG---T  155 (352)
T ss_pred             CCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeEC----CE---Ecc---c
Confidence            5 788999999999988999998765   58999999999999999999999999997443210    10   011   1


Q ss_pred             CccEEEec--CCCCCCccCCcEEEEEeCCccccccccccCCCCCCC---CCCCccccCCCchHHHHHHHHHHHhcHHHHH
Q psy10210        335 GVTSISVD--THKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN---YGSPSVSGSRSGGIIATCWAAMMYFGFEAQV  409 (435)
Q Consensus       335 gvd~~~~s--~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~---~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~  409 (435)
                      ..|+.++|  .||++.++. .|+++++++++.+.............   +.......+-....+.++.+....-+.+...
T Consensus       156 ~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~  234 (352)
T cd00616         156 FGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEII  234 (352)
T ss_pred             CcceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHH
Confidence            12555555  559963343 36667776665432111100000000   0000111111111222222222223345566


Q ss_pred             HHHHHHHHHHHHHHHhcCCcccc
Q psy10210        410 WICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       410 ~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++.+++.+.+.+.++.++++..+
T Consensus       235 ~~~~~~~~~~~~~L~~~~g~~~~  257 (352)
T cd00616         235 ARRREIAERYKELLADLPGIRLP  257 (352)
T ss_pred             HHHHHHHHHHHHHhcCCCCccCC
Confidence            66677777777777777766654

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.80  E-value=1.4e-18  Score=173.17  Aligned_cols=167  Identities=12%  Similarity=-0.015  Sum_probs=131.4

Q ss_pred             cChhHHHHHHHHHHHHHHHhCCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH-HH-HHHHc
Q psy10210        169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF-DK-AANYF  245 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~-~~-~~~~~  245 (435)
                      ..+.+.++..++++.+++++|.+++.+++++ +|||++++.++.++..+++.        .++....|.+- .. +++..
T Consensus        42 r~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~--------~vi~~g~f~~~~~~~~~~~~  113 (378)
T PRK03080         42 RQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRV--------DHLAWESFGSKWATDVVKQL  113 (378)
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcc--------eEEEeCHHHHHHHHHHHhhc
Confidence            3467888999999999999998655567777 49999999999988542122        34445566663 33 34677


Q ss_pred             CC-EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        246 GM-KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       246 g~-~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      |+ +++.++.+.++.+|+++++    . ++.|.+++.+|.||.+.|+++|++  +++|+++++|++++.+..        
T Consensus       114 g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~--------  178 (378)
T PRK03080        114 KLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL--------  178 (378)
T ss_pred             CCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccC--------
Confidence            99 9999988766778877643    2 567899999999999999999999  889999999999865433        


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                         ++|+..  +|++++++|||+++|.|+|+++++++.+
T Consensus       179 ---pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~  212 (378)
T PRK03080        179 ---PLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAV  212 (378)
T ss_pred             ---CCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHH
Confidence               677764  8999999999988999999988886543

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.79  E-value=4.2e-18  Score=169.49  Aligned_cols=172  Identities=18%  Similarity=0.170  Sum_probs=130.8

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.+++.+|.+++ ++++|+|+++++.+++.++.++++.        |+++.|+|+.+...++..|++++.+|+++++.
T Consensus        76 lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~--------vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  146 (371)
T PRK05166         76 LREAIAARTGVPAD-RIILGNGSEDLIAVICRAVLRPGDR--------VVTLYPSFPLHEDYPTMMGARVERVTVTPDLG  146 (371)
T ss_pred             HHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence            44455555565554 8999999999999999998777766        99999999999999999999999999987788


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCC-CCC-CCCC
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDF-SLPG  335 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~-~~~g  335 (435)
                      +|+++++++++++++++++++|+||||.+-+.+++.++++.  .++++++|++|..+..      +...++ +.. ...+
T Consensus       147 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~------~~~~~~~~~~~~~~~  220 (371)
T PRK05166        147 FDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA------GDDYPSALTLLKARG  220 (371)
T ss_pred             CCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC------CcCcccHHHHHhhcC
Confidence            99999999998899999999999999999666655555543  4889999999998763      111111 111 1111


Q ss_pred             -ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        336 -VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 -vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                       -.++..|+.|... +...+|+++..++++.+.
T Consensus       221 ~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~  253 (371)
T PRK05166        221 LPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGL  253 (371)
T ss_pred             CCEEEEeechHhhhcchhheeeeecCCHHHHHH
Confidence             2456778999843 446789977777766544

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.79  E-value=2.7e-18  Score=170.92  Aligned_cols=208  Identities=17%  Similarity=0.113  Sum_probs=146.1

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+   .+++++||++++.+++.++.++++.        |++++|.|++....+    ...|.++..++ 
T Consensus        56 ~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l~~~GD~--------Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-  123 (386)
T PRK08045         56 VVQRALAELEGGA---GAVLTNTGMSAIHLVTTVFLKPGDL--------LVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-  123 (386)
T ss_pred             HHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHcCCCCE--------EEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence            3445677777642   5899999999999999998877776        999999999744332    22345666654 


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                          ..|++++++++++++++|++++|+||||.+.++++|.++|+++|+++++|++|+.+..         ..++   ..
T Consensus       124 ----~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~---------~~pl---~~  187 (386)
T PRK08045        124 ----QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL---------QNPL---AL  187 (386)
T ss_pred             ----CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc---------CCch---hh
Confidence                2589999999999999999999999999999999999999999999999999975432         1133   34


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHH
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC  412 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~  412 (435)
                      |+|+++.|+|||+.|+.+  .|+++.+++++.+...... ...|.         .   .....+|.+++.+.  .+..++
T Consensus       188 gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~-~~~g~---------~---~~p~~~~l~~rgl~--tl~~R~  252 (386)
T PRK08045        188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWA-NNIGV---------T---GGAFDSYLLLRGLR--TLVPRM  252 (386)
T ss_pred             CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHH-HhcCC---------C---CCHHHHHHHHhhhc--cHHHHH
Confidence            789999999999877765  5776666666544321111 11111         0   11236676666664  355555


Q ss_pred             HHHHHHHHH---HHHhcCCc
Q psy10210        413 VRYHFNYKS---CLQNLSDL  429 (435)
Q Consensus       413 ~~~~~~~~~---~~~~l~~l  429 (435)
                      ++..+.+..   .++.-+.+
T Consensus       253 ~~~~~na~~la~~L~~~p~v  272 (386)
T PRK08045        253 ELAQRNAQAIVKYLQTQPLV  272 (386)
T ss_pred             HHHHHHHHHHHHHHHcCCCE
Confidence            555555444   44444544

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=5.7e-18  Score=170.58  Aligned_cols=153  Identities=22%  Similarity=0.263  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp  253 (435)
                      .++++.++++.|...   .++|++||+|+.+++.++..+++.        ||++...|.+....+    ...|++++.++
T Consensus        67 ~~le~~lA~l~g~~~---av~~sSGt~Al~~al~~ll~~Gd~--------Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd  135 (433)
T PRK08134         67 AVLEERVAALEGGVG---AIATASGQAALHLAIATLMGAGSH--------IVASSALYGGSHNLLHYTLRRFGIETTFVK  135 (433)
T ss_pred             HHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCE--------EEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence            344557777887653   588999999999999988766665        999999998764443    45799999998


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++     |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++....         ..++   .
T Consensus       136 ~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~---------~~pl---~  198 (433)
T PRK08134        136 PG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL---------LRPF---E  198 (433)
T ss_pred             CC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---h
Confidence            64     79999999999999999999999999999999999999999999999999864322         1122   4


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEe
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYR  359 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~  359 (435)
                      .|+|+++.|.|||+ +|.|  +|.+++.
T Consensus       199 ~GaD~vv~S~tK~l-~g~g~~~gG~v~~  225 (433)
T PRK08134        199 HGADLVYHSATKFL-GGHGTAIGGVLVD  225 (433)
T ss_pred             cCCCEEEecccccc-CCCCCceEEEEEe
Confidence            58999999999995 5544  4555554

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.79  E-value=5.2e-18  Score=168.20  Aligned_cols=170  Identities=19%  Similarity=0.145  Sum_probs=131.4

Q ss_pred             HHHHHHHHHHhCCCCCCceEE-cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCM-TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~-t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                      .++++.+++++|.+++ ++++ |+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|.++
T Consensus        72 ~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~i~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~~~~~~  142 (361)
T PRK00950         72 PELREALSKYTGVPVE-NIIVGGDGMDEVIDTLMRTFIDPGDE--------VIIPTPTFSYYEISAKAHGAKPVYAKREE  142 (361)
T ss_pred             HHHHHHHHHHhCCCHH-HEEEeCCCHHHHHHHHHHHhcCCCCE--------EEEcCCChHHHHHHHHHcCCEEEEeecCC
Confidence            4555666677777665 7888 788899999999888766665        99999999999999999999999999877


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      ++.+|++++++.++++++++++++|+||||.+.+.+++.++|+++|+++|+|++|++|.-       ....++. ....-
T Consensus       143 ~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-------~~~~~~~-~~~~~  214 (361)
T PRK00950        143 DFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-------YDYTPLA-LEYDN  214 (361)
T ss_pred             CCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-------cchHHHH-HhcCC
Confidence            778999999999988899999999999999999999999999999999999999987641       0011111 01112


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .++..|++|..+ ....+|+++. ++++.+
T Consensus       215 vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~  243 (361)
T PRK00950        215 LIIGRTFSKVFGLAGLRIGYGFV-PEWLID  243 (361)
T ss_pred             EEEEEeehHhhcCchhhcchhcC-CHHHHH
Confidence            355668889742 2245788654 444443

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.79  E-value=7.3e-18  Score=167.56  Aligned_cols=171  Identities=17%  Similarity=0.163  Sum_probs=130.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++++|.+++ ++++|+|+++++.+++.++.++++.        |++++|+|..+...++..|++++.+|. +++
T Consensus        71 ~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~  140 (367)
T PRK02731         71 ELKAALAEKFGVDPE-RIILGNGSDEILELLARAYLGPGDE--------VIYSEHGFAVYPIAAQAVGAKPVEVPA-KDY  140 (367)
T ss_pred             HHHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEecCCHHHHHHHHHHcCCeEEEecc-cCC
Confidence            566667777777654 8999999999999999888766665        999999999999888999999999998 457


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCC-C
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-G  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-g  335 (435)
                      .+|++++++++++++++|++++|+||||.+-+.+++.++++.+  |+++++|++|..+...     +.....++.... .
T Consensus       141 ~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~-----~~~~~~~~~~~~~~  215 (367)
T PRK02731        141 GHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR-----KDYEDGLELVAKFP  215 (367)
T ss_pred             CCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC-----cCcccHHHHHhhcC
Confidence            7999999999988999999999999999999889999988875  8999999999876541     100011221111 1


Q ss_pred             ccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYG-FTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~-~~p~g~g~il~~~~~~~~  365 (435)
                      -.+++.|+.|.. .++.++|+++. ++++.+
T Consensus       216 ~~i~~~S~SK~~g~~G~RiG~l~~-~~~~~~  245 (367)
T PRK02731        216 NVVVTRTFSKAYGLAGLRVGYGIA-PPEIID  245 (367)
T ss_pred             CEEEEeeehHhhcCcccceeeeeC-CHHHHH
Confidence            245556788973 23456799655 455544

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.79  E-value=6.2e-18  Score=167.85  Aligned_cols=206  Identities=15%  Similarity=0.095  Sum_probs=143.1

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|.. ..++.+.+.+.+....         ..|....|.+++++++++++.+....+..               
T Consensus        30 i~l~~~~p~~-~~~~~~~~~~~~~~~~---------~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~---------------   84 (364)
T PRK07865         30 VDLSVGTPVD-PVPPVIQEALAAAADA---------PGYPTTAGTPELREAIVGWLARRRGVTGL---------------   84 (364)
T ss_pred             EEcCCCCCCC-CCCHHHHHHHHHHHhh---------CCCCCccCCHHHHHHHHHHHHHHcCCCCC---------------
Confidence            4455566654 3345566666554321         14556678999999999998764322111               


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                                ++ +++++|+|+++++.+++.++ .++++.        |++++|+|+.+...++..|++++.++.     
T Consensus        85 ----------~~-~~I~it~G~~~~i~~~~~~l~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~-----  140 (364)
T PRK07865         85 ----------DP-AAVLPVIGSKELVAWLPTLLGLGPGDV--------VVIPELAYPTYEVGARLAGATVVRADS-----  140 (364)
T ss_pred             ----------Cc-ccEEEccChHHHHHHHHHHHcCCCCCE--------EEECCCCcccHHHHHHhcCCEEEecCC-----
Confidence                      23 38999999999999988877 566666        999999999999999999999887752     


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC----
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS----  332 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~----  332 (435)
                        ++++.   .+++++|++++|+||||.+   +++++|.++|++||+++++|++|+.+...     +.....++..    
T Consensus       141 --~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~  210 (364)
T PRK07865        141 --LTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWD-----AEPVSILDPRVCGG  210 (364)
T ss_pred             --hhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccC-----CCCCccccccccCC
Confidence              22322   2578999999999999988   66889999999999999999999876541     1111111111    


Q ss_pred             CCCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        333 LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      ...-.+++.|++|.. .....+|+++ .++++.+.
T Consensus       211 ~~~~~i~~~S~SK~~~~~GlRiG~i~-~~~~~~~~  244 (364)
T PRK07865        211 DHTGLLAVHSLSKQSNLAGYRAGFVA-GDPALVAE  244 (364)
T ss_pred             ccceEEEEeechhccCCCceeeEEEe-cCHHHHHH
Confidence            112357778899984 3345689854 55565443

>PLN02721 threonine aldolase

Probab=99.79  E-value=1.6e-18  Score=171.26  Aligned_cols=169  Identities=17%  Similarity=0.178  Sum_probs=124.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+   .++++++|++++..++.++.+ +++.        |++++++|.+..+   .+...|++++.+|.
T Consensus        44 ~l~~~la~~~~~~---~~~~~~~Gs~a~~~~l~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~  112 (353)
T PLN02721         44 RLEEEMAKIFGKE---AALFVPSGTMGNLISVLVHCDVRGSE--------VILGDNSHIHLYENGGISTLGGVHPRTVKN  112 (353)
T ss_pred             HHHHHHHHHhCCc---eeEEecCccHHHHHHHHHHccCCCCe--------EEEcCccceehhcccchhhhcCceeEecCC
Confidence            3445566666653   357778889898888888765 6665        9999999977665   57778999999998


Q ss_pred             CCCccccHHHHHHHhh-------cCceEEEEeC-CCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        255 TSSYTVDLAALQSAIT-------GNTVMLVGSM-PNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~-------~~~~~v~~~~-p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      ++++.+|+++++++++       +++++|++++ ++||+|.+   +++++|.++|++||+++|+|++|..+...+   .+
T Consensus       113 ~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~---~~  189 (353)
T PLN02721        113 NEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVA---LG  189 (353)
T ss_pred             CcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhh---hC
Confidence            8888899999999998       5889999976 57889987   348999999999999999999875322100   11


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      .   +.+....++|++++++||++.+|.  |++++.++++...
T Consensus       190 ~---~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~  227 (353)
T PLN02721        190 V---PVHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIRK  227 (353)
T ss_pred             C---CHHHHhhhCCEEEEecccccCCce--eeEEecCHHHHHh
Confidence            1   122123468999999999965554  4446667776543

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.79  E-value=2.9e-18  Score=171.23  Aligned_cols=158  Identities=20%  Similarity=0.215  Sum_probs=124.5

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp  253 (435)
                      .++++.+++++|.+   .+++|+||++|+.+++.++.++++.        |+++++.|.+..    ..+...|++++.++
T Consensus        64 ~~le~~la~l~g~~---~~v~~ssG~~Ai~~al~al~~~Gd~--------Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd  132 (390)
T PRK08133         64 TMFQERLAALEGAE---ACVATASGMAAILAVVMALLQAGDH--------VVSSRSLFGSTVSLFEKIFARFGIETTFVD  132 (390)
T ss_pred             HHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence            44556778888764   4688999999999999998877776        999999887744    45667899999998


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++     |+++++++++++|++|++++|+||+|.+.++++|.++|++||+++++|++++....         ..++   .
T Consensus       133 ~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~---------~~pl---~  195 (390)
T PRK08133        133 LT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL---------QQPL---K  195 (390)
T ss_pred             CC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---h
Confidence            64     78999999999999999999999999999999999999999999999999864322         1122   3


Q ss_pred             CCccEEEecCCCCCCccC-CcEEEEEeCCcc
Q psy10210        334 PGVTSISVDTHKYGFTPK-GSSVVLYRDLKY  363 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~-g~g~il~~~~~~  363 (435)
                      .|+|+++.|+||+..++. ..|.+++.+++.
T Consensus       196 ~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~  226 (390)
T PRK08133        196 LGADVVIHSATKYLDGQGRVLGGAVVGSKEL  226 (390)
T ss_pred             hCCcEEEeecceeecCCcceEeEEEEcCHHH
Confidence            378999999999954432 243435455544

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.79  E-value=1.3e-18  Score=172.06  Aligned_cols=258  Identities=11%  Similarity=0.001  Sum_probs=161.3

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC---CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCC-hHHHHHHHHHHHHHHhhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH---PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSG-GTESIMMACKAYRDYAREE  220 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~---~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~g-gteai~~a~~a~~~~~~~~  220 (435)
                      ++++++++.+.+..+.......   .+..+.+.++..++++.+++++|.+.+.++++|+| +|+++++++.++..+++. 
T Consensus        11 p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~-   89 (355)
T cd00611          11 PEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT-   89 (355)
T ss_pred             CHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe-
Confidence            4556666655553321111111   12235667888899999999999865568899877 999999999998542221 


Q ss_pred             cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc-c-HHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV-D-LAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~-d-~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                          ..+|++....|. +.+.++..|++++.+++++++.. + ++..+..+++++++|.+++..|.||..  +.   +++
T Consensus        90 ----~~~i~~g~~~~~-~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~--~~---~i~  159 (355)
T cd00611          90 ----ADYVVTGAWSAK-AAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVE--FD---EVP  159 (355)
T ss_pred             ----EEEEECCHHHHH-HHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEE--cc---eec
Confidence                223444322222 34467888999999998654333 4 333334567889999999999999997  22   455


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC-C
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG-G  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g-g  377 (435)
                      +.||++++||++++.+.           .++|+...++  ...+.||+ +||.|+|+++++++.+.+.. ...+.+.. .
T Consensus       160 ~~~g~~~~VDa~qs~g~-----------~~idv~~~~~--~~ss~~K~-lGP~G~g~l~~~~~~~~~~~-~~~~~~~~~~  224 (355)
T cd00611         160 DTGGVPLVADMSSNILS-----------RPIDVSKFGV--IYAGAQKN-LGPAGVTVVIVRKDLLGKAR-KITPSMLNYK  224 (355)
T ss_pred             ccCCCeEEEEccccccC-----------CCCCHHHhCE--EEeecccc-cCCCceEEEEECHHHHhhcc-cCCCCcccHH
Confidence            56999999999986543           3777766554  44669997 68999999888775443211 11111110 0


Q ss_pred             C-CCCCccccCCCchHHHHHHHHHHHhcHH-HHHH---HHHHHHHHHHHHHHhcCC
Q psy10210        378 N-YGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVW---ICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       378 ~-~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~---~~~~~~~~~~~~~~~l~~  428 (435)
                      . .......++.+...+.++.++++.+..+ |+.+   +.+++.+.+.+.++++++
T Consensus       225 ~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g  280 (355)
T cd00611         225 THADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG  280 (355)
T ss_pred             HHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            0 0111224566666777888888876544 4544   444555555555555544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=2.6e-18  Score=171.54  Aligned_cols=160  Identities=16%  Similarity=0.207  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp  253 (435)
                      .++++.++++.|.+.  . +++++|+.++.+++. +..+++.        |+++++.|++.    ...++..|++++.++
T Consensus        57 ~~le~~lA~l~g~~~--~-v~~~sG~~ai~~~l~-~l~~Gd~--------Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~  124 (390)
T PRK08064         57 EALEDIIAELEGGTK--G-FAFASGMAAISTAFL-LLSKGDH--------VLISEDVYGGTYRMITEVLSRFGIEHTFVD  124 (390)
T ss_pred             HHHHHHHHHHhCCCC--e-EEECCHHHHHHHHHH-HhCCCCE--------EEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence            345567788888753  3 455666889988886 5555655        99999988753    355667899999998


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      .+     |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+...         .+.   .
T Consensus       125 ~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---------~~~---~  187 (390)
T PRK08064        125 MT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ---------KPL---D  187 (390)
T ss_pred             CC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc---------Cch---h
Confidence            63     789999999999999999999999999999999999999999999999998754321         122   3


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      .|+|+++.|+||+..|+.|  .|+++++++++.+.
T Consensus       188 ~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~  222 (390)
T PRK08064        188 LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQK  222 (390)
T ss_pred             hCCcEEEeecceeccCCccceeEEEEeCCHHHHHH
Confidence            4789999999999777776  47777776665543

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.79  E-value=4e-18  Score=170.10  Aligned_cols=159  Identities=23%  Similarity=0.253  Sum_probs=124.8

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH----HcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN----YFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~----~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+.   .+++++|++|+.+++.++.++++.        |+++++.|.+....+.    ..|++++.++.
T Consensus        65 ~Le~~lA~~~g~~~---~i~~~sG~~Ai~~~l~all~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~  133 (388)
T PRK07811         65 ALEEQLAALEGGAY---GRAFSSGMAATDCLLRAVLRPGDH--------IVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL  133 (388)
T ss_pred             HHHHHHHHHhCCCc---eEEeCCHHHHHHHHHHHHhCCCCE--------EEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence            34456777777654   355567799999999999887776        9999999997544332    35777777764


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+.+..         ..++   ..
T Consensus       134 -----~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~---------~~p~---~~  196 (388)
T PRK07811        134 -----SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL---------QQPL---AL  196 (388)
T ss_pred             -----CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc---------CCch---hh
Confidence                 489999999999999999999999999999999999999999999999999875432         1122   24


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      |+|+++.|++|++.+|.+  .|+++.+++++.+
T Consensus       197 gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~  229 (388)
T PRK07811        197 GADVVVHSTTKYIGGHSDVVGGALVTNDEELDE  229 (388)
T ss_pred             CCcEEEecCceeecCCCCcEEEEEEECCHHHHH
Confidence            789999999999766644  4777777766544

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.79  E-value=4.7e-18  Score=166.51  Aligned_cols=179  Identities=18%  Similarity=0.217  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      .++++.+++.+|..+.+++++++|++|.+.+.+++++.+++.        |+++.|+|..|...++..|++++.+|.++ 
T Consensus        60 ~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~--------vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-  130 (356)
T COG0079          60 RELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDT--------VLIPEPTFSMYEIAAQLAGAEVVKVPLKE-  130 (356)
T ss_pred             HHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCE--------EEEcCCChHHHHHHHHhcCCeEEEecccc-
Confidence            455666777777334348999999999999999999998887        99999999999999999999999999987 


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCC-CC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~  334 (435)
                      +..|++.+.+++.+++++|++++||||||..-+.++|.+++..-  +.++++||+|..|.-+.         ..... ..
T Consensus       131 ~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~---------~~~l~~~~  201 (356)
T COG0079         131 FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPES---------SLELLKYP  201 (356)
T ss_pred             cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCch---------hhhhccCC
Confidence            99999999999999999999999999999996666666665543  88999999999875410         11111 11


Q ss_pred             CccEEEecCCC-CCCccCCcEEEEEeCCccccccccccCCCC
Q psy10210        335 GVTSISVDTHK-YGFTPKGSSVVLYRDLKYKHCQYFVTSDWP  375 (435)
Q Consensus       335 gvd~~~~s~hK-~~~~p~g~g~il~~~~~~~~~~~~~~~~~~  375 (435)
                      .--++.=++.| ||+++..+|+ .+.++++........++|.
T Consensus       202 ~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~  242 (356)
T COG0079         202 PNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFN  242 (356)
T ss_pred             CCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCC
Confidence            21345557889 6677788999 7788887766555566664

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.79  E-value=1.8e-17  Score=165.68  Aligned_cols=251  Identities=13%  Similarity=0.056  Sum_probs=164.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+..+...++ .+....+......++++.++++++.  + +.+++++|++++..++.++.++++.     
T Consensus        55 ~~~v~~a~~~~~~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~--~-~~i~~~~g~~~~~~~l~~~~~~gd~-----  125 (385)
T PRK05958         55 HPRLIAAAQQAARRYGAGSG-GSRLVTGNSPAHEALEEELAEWFGA--E-RALLFSSGYAANLAVLTALAGKGDL-----  125 (385)
T ss_pred             CHHHHHHHHHHHHhcCCCCC-CcCcccCCcHHHHHHHHHHHHHhCC--C-cEEEECcHHHHHHHHHHHhCCCCCE-----
Confidence            57788888888765432211 1122223455677788889998874  2 4566667788888888777666665     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY  301 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~  301 (435)
                         |++++++|+++..++...|++++.+|.     .|++++++.+++   ++.++++.+++|++|...++++|.++|++|
T Consensus       126 ---V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~  197 (385)
T PRK05958        126 ---IVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRH  197 (385)
T ss_pred             ---EEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHh
Confidence               999999999999999999999988874     378899998865   367777778999999999999999999999


Q ss_pred             CCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        302 GIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       302 ~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      |+++|+|++|+.+.+..   .|..... ........+++..|+||++ ++.| |++ +.++++.+........+.     
T Consensus       198 ~~~li~De~~~~g~~~~---~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G-g~~-~~~~~~~~~~~~~~~~~~-----  266 (385)
T PRK05958        198 GAWLLVDEAHGTGVLGP---QGRGLAAEAGLAGEPDVILVGTLGKAL-GSSG-AAV-LGSETLIDYLINRARPFI-----  266 (385)
T ss_pred             CCEEEEECcccccccCC---CCCchHHhhCCCCCCceEEEEechhhc-ccCC-cEE-EcCHHHHHHHHHhCccce-----
Confidence            99999999997654321   1111111 1122222357778899994 6666 664 445554432111111111     


Q ss_pred             CCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        381 SPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                         ..++.+....++++++++.+.. +...+++.+..+.+.+.++.+
T Consensus       267 ---~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~  310 (385)
T PRK05958        267 ---FTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL  310 (385)
T ss_pred             ---ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence               1112223344566667766543 355666666666666666653

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.79  E-value=1.1e-17  Score=167.58  Aligned_cols=162  Identities=17%  Similarity=0.175  Sum_probs=123.5

Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC----------CccccHHH
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS----------SYTVDLAA  264 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~----------~~~~d~~~  264 (435)
                      .+++|+||++|+.+++.++.++||.        | +++|.|.++...+...|++++.+++++          .|.+|+++
T Consensus        70 ~vv~t~~Gt~Al~la~~al~~pGD~--------V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~  140 (431)
T cd00617          70 HIIPTHQGRGAENILFSILLKPGRT--------V-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAK  140 (431)
T ss_pred             eEEEcCCHHHHHHHHHHHhCCCCCE--------E-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHH
Confidence            6899999999999999999887765        6 688999999999999999999999862          24599999


Q ss_pred             HHHHhhcC----ceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhccc--ccCCCCCCCC-C--
Q psy10210        265 LQSAITGN----TVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMS--AAGYPLPPFD-F--  331 (435)
Q Consensus       265 l~~~i~~~----~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~--~~g~~~~~~d-~--  331 (435)
                      ++++|+++    +++|+++.|+||+ |.+   +++++|.++|++||++||.|+++...-..|.+  ..|+...++. .  
T Consensus       141 Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~  220 (431)
T cd00617         141 LEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAR  220 (431)
T ss_pred             HHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHH
Confidence            99999865    7899999999998 777   56788999999999999999996532221211  1122111111 0  


Q ss_pred             C-CCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        332 S-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       332 ~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      . ....|++++|+||.+.+|.| |+++.+++++.+.
T Consensus       221 e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~  255 (431)
T cd00617         221 EMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEE  255 (431)
T ss_pred             HhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHH
Confidence            0 12369999999998777764 6777777656544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.79  E-value=7.3e-18  Score=171.83  Aligned_cols=151  Identities=17%  Similarity=0.121  Sum_probs=119.4

Q ss_pred             ceEEcCChHHHHHHHHHH-----HHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc--CCEEEEEecCC--C-----ccc
Q psy10210        195 CGCMTSGGTESIMMACKA-----YRDYAREEKGISLPEIVLPTTAHPAFDKAANYF--GMKVKHIRLTS--S-----YTV  260 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a-----~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~--g~~v~~vp~~~--~-----~~~  260 (435)
                      ++++|+|+++|+..++.+     +.++||.        |++++|+|+.+...++..  |++++.++.+.  +     +.+
T Consensus       157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~--------Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~  228 (521)
T TIGR03801       157 DLFAVEGGTAAMCYIFDSLKANELLKKGDK--------IALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQY  228 (521)
T ss_pred             eEEEeCCHHHHHHHHHHHHhHhhcCCCCCE--------EEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCC
Confidence            799999999999999887     4566665        999999999999998876  67777777752  2     789


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      |+++++++++++++++++++|+||||.+   +.+++|+++|++|  +++||+|++|+.|...+.   .    .... .+.
T Consensus       229 d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~---s----l~~~-~~~  300 (521)
T TIGR03801       229 PDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFR---S----LFAE-LPY  300 (521)
T ss_pred             CHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccccc---c----hhhh-CCC
Confidence            9999999988899999999999999999   5688899999987  999999999998764211   0    1111 223


Q ss_pred             ccEEEecCCCCC-CccCCcEEEEEeCC
Q psy10210        336 VTSISVDTHKYG-FTPKGSSVVLYRDL  361 (435)
Q Consensus       336 vd~~~~s~hK~~-~~p~g~g~il~~~~  361 (435)
                      -.+++.|+.|.. .....+|+++..++
T Consensus       301 ~vI~v~SfSK~fg~~G~RlG~i~~~~~  327 (521)
T TIGR03801       301 NTIGVYSFSKYFGATGWRLGTIALHKD  327 (521)
T ss_pred             CEEEEEcchhhccCchhhhhhhhcCch
Confidence            457777899984 24466899776554

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.79  E-value=1.7e-17  Score=165.85  Aligned_cols=251  Identities=13%  Similarity=0.038  Sum_probs=164.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|.+.+++.+.+.+.... ...+....+..++..++++.+++++|.+  .++++|+| ++++..++.++.++++.    
T Consensus        48 ~~~~~~~a~~~~~~~~~~~-~~~~~~~~g~~~l~~~l~~~l~~~~g~~--~~i~~~sG-~~a~~~a~~~~~~~gd~----  119 (385)
T TIGR01825        48 DHPRLKEAAAQAIQQYGVG-AGAVRTIAGTLRLHEELEEKLAKFKKTE--AALVFQSG-FNTNQGVLSALLRKGDI----  119 (385)
T ss_pred             CCHHHHHHHHHHHHHcCCC-CCccCcccCCcHHHHHHHHHHHHHhCCC--cEEEECcH-HHHHHHHHHHhCCCCCE----
Confidence            3677777777776543211 1222234456677778888888888753  25666655 78888888888776665    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                          |+++++.|+++...+...|+++..++     .+|++++++.+.+    ++++|++++++||+|.+.++++|.++|+
T Consensus       120 ----vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~  190 (385)
T TIGR01825       120 ----VLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAE  190 (385)
T ss_pred             ----EEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHH
Confidence                99999999999888888888877664     3678888887753    6889999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCC-CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~-~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      +||+++|+|++|+.+.+..   .+.+ ...++.. .++|++..+++|++ ++.| |++ +.++++.+........+..+ 
T Consensus       191 ~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~-~~~~i~~~s~sK~~-~~~g-G~~-~~~~~~~~~~~~~~~~~~~~-  262 (385)
T TIGR01825       191 RYGAVTYVDDAHGSGVMGE---AGRGTVHHFGLE-DKVDIQVGTLSKAI-GVVG-GYA-AGHKELIEYLKNRARPFLFS-  262 (385)
T ss_pred             HhCCEEEEECcccccCcCC---CCCccHhhcCCC-cCCcEEEEeccHHh-hcCC-CEE-ecCHHHHHHHHHhCcccccc-
Confidence            9999999999997665421   1110 0112332 56788999999995 5544 664 44455443321111112111 


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                             +..+....+++.+++..+. .....++.++..+.+.+.++++
T Consensus       263 -------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~  304 (385)
T TIGR01825       263 -------TAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL  304 (385)
T ss_pred             -------CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                   1112222334555555442 2345666666667676666654

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.79  E-value=4.6e-18  Score=169.12  Aligned_cols=160  Identities=18%  Similarity=0.161  Sum_probs=125.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.   +++++|+||++|+.+++.++.++++.        |+++.|.|.+....+    ...++++..++.
T Consensus        55 ~le~~lA~l~g~---~~v~~~~gg~~Ai~~~l~all~~GD~--------Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~  123 (382)
T TIGR02080        55 LLQQALAELEGG---AGAVVTNTGMSAIHLVTTALLGPDDL--------LVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ  123 (382)
T ss_pred             HHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHHcCCCCE--------EEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence            345567777763   36899999999999999999877776        999999998754433    223556655542


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||||.+.++++|.++|+++|+++++|++|+.+...         .++   ..
T Consensus       124 -----~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---------~pl---~~  186 (382)
T TIGR02080       124 -----GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ---------NPL---AL  186 (382)
T ss_pred             -----CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC---------Cch---hh
Confidence                 3789999999999999999999999999999999999999999999999999754321         122   23


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      |+|+++.|++||+.|+.+  .|+++.+++++.+.
T Consensus       187 gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~  220 (382)
T TIGR02080       187 GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE  220 (382)
T ss_pred             CCCEEEeecceeccCCCCceeEEEEeCCHHHHHH
Confidence            789999999999777665  67767777765443

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PLN02822 serine palmitoyltransferase

Probab=99.78  E-value=1.6e-17  Score=170.00  Aligned_cols=261  Identities=14%  Similarity=0.086  Sum_probs=176.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++++++.+.+.++... ...+..+-+..+...++++.++++++.+  +.+++++|++ ++..++.++.++++.    
T Consensus       124 ~~~~i~ea~~~al~~~G~g-~~g~r~~yg~~~~~~~Lee~La~~~~~~--~~i~~s~G~~-a~~sai~a~~~~gd~----  195 (481)
T PLN02822        124 GNEKIKESCTSALEKYGVG-SCGPRGFYGTIDVHLDCETKIAKFLGTP--DSILYSYGLS-TIFSVIPAFCKKGDI----  195 (481)
T ss_pred             CCHHHHHHHHHHHHHhCCC-CcccCccccCHHHHHHHHHHHHHHhCCC--CEEEECCHHH-HHHHHHHHhCCCCCE----
Confidence            5899999999999886432 2223334456777888889999999864  3688888776 678888888777665    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhh--cCc-eEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAIT--GNT-VMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~--~~~-~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                          |++....|.++..++...|.+++.++.++  ++..+++++++...  +++ ++|+++.+++++|.+.++++|.++|
T Consensus       196 ----Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~  271 (481)
T PLN02822        196 ----IVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLK  271 (481)
T ss_pred             ----EEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHH
Confidence                88898899999899999999999998652  12222333322221  234 7999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      ++||+++++||+|+.+++   +..|.+.. -++.....+|+++.|++|. ++..| |+++ .++++.+.+.....   + 
T Consensus       272 ~k~~~~LIvDEa~s~gvl---G~~G~G~~e~~~v~~~~~dii~~s~sKa-lg~~G-G~i~-g~~~ii~~~~~~~~---~-  341 (481)
T PLN02822        272 EKYRFRVLLDESNSFGVL---GKSGRGLSEHFGVPIEKIDIITAAMGHA-LATEG-GFCT-GSARVVDHQRLSSS---G-  341 (481)
T ss_pred             HHcCCEEEEECCcccccc---CCCCCChHHHcCCCCCCCeEEEecchhh-hhhCC-eEEE-cCHHHHHHHHhcCC---c-
Confidence            999999999999985544   22222211 1112123579999999999 46665 7744 55555544321111   1 


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                          .+..++.+....+++.++++.+.. +...+++++..+.+.+.+++++++.
T Consensus       342 ----~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~  391 (481)
T PLN02822        342 ----YVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLS  391 (481)
T ss_pred             ----eeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence                122333344444455567766544 5667777888888888777765543

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.78  E-value=7.5e-18  Score=168.22  Aligned_cols=164  Identities=20%  Similarity=0.178  Sum_probs=126.0

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~  256 (435)
                      ++++.+++++|..   ..++++|||+|+.+++.++ ..+++.        |++++++|.++..++...|++++.++++ +
T Consensus        33 ~le~~la~~~g~~---~~v~~~sgt~al~~~l~al~~~~Gd~--------Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~  101 (380)
T TIGR03588        33 AFEEALAEYVGAK---YAVAFNSATSALHIACLALGVGPGDR--------VWTTPITFVATANCALYCGAKVDFVDIDPD  101 (380)
T ss_pred             HHHHHHHHHHCCC---eEEEEcCHHHHHHHHHHHcCCCCCCE--------EEeCCcchHHHHHHHHHcCCEEEEEecCCC
Confidence            3445566667664   3466678999999999988 455655        9999999999999999999999999997 5


Q ss_pred             CccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        257 SYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       257 ~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      ++.+|+++++++++    ++|++|++++   ++|...++++|.++|++||+++|+|++++.+.. +.   +   .++.. 
T Consensus       102 ~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~-~~---~---~~~g~-  170 (380)
T TIGR03588       102 TGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAE-YG---G---KPVGN-  170 (380)
T ss_pred             cCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCc-cC---C---EeCCC-
Confidence            77899999999998    7889888654   589999999999999999999999999976532 11   1   01110 


Q ss_pred             CCCccEEEecCC--CCCCccCCcEEEEEeCCcccc
Q psy10210        333 LPGVTSISVDTH--KYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       333 ~~gvd~~~~s~h--K~~~~p~g~g~il~~~~~~~~  365 (435)
                      ....|..++|+|  |++..+.| |+++++++++.+
T Consensus       171 ~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~~~  204 (380)
T TIGR03588       171 CRYADATVFSFHPVKIITTAEG-GAVTTNDEELAE  204 (380)
T ss_pred             ccccceEEEecCCCCcccccCc-eEEEECCHHHHH
Confidence            012389999988  88655544 666777776554

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.78  E-value=8.2e-18  Score=166.85  Aligned_cols=155  Identities=16%  Similarity=0.126  Sum_probs=122.3

Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecCC
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLTS  256 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~~  256 (435)
                      .+.++++.|.+   .+++++||++|+..++.++.+++|.        |+++++.|++....    .+..|+++..++.+ 
T Consensus        56 E~~lA~l~g~~---~~~~~~sG~~Ai~~al~all~~GD~--------Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-  123 (377)
T TIGR01324        56 QDAMCELEGGA---GCYLYPSGLAAVTNSILAFVKAGDH--------VLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-  123 (377)
T ss_pred             HHHHHHHhCCC---cEEEECcHHHHHHHHHHHhcCCCCE--------EEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence            34566666653   6788999999999999999887776        99999999886543    35568888777532 


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                          +.++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+....         ..++   ..|+
T Consensus       124 ----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~---------~~pl---~~ga  187 (377)
T TIGR01324       124 ----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLL---------FKPL---EHGV  187 (377)
T ss_pred             ----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc---------cCcc---ccCc
Confidence                23789999999999999999999999999999999999999999999999975433         1133   4589


Q ss_pred             cEEEecCCCCCCccCC--cEEEEEeCCccc
Q psy10210        337 TSISVDTHKYGFTPKG--SSVVLYRDLKYK  364 (435)
Q Consensus       337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~  364 (435)
                      |+++.|.+||+.|+.+  .|+ ++.+++..
T Consensus       188 Divv~S~tK~l~G~~d~~gG~-v~~~~~~~  216 (377)
T TIGR01324       188 DISIQAGTKYLVGHSDIMIGT-VVANARTW  216 (377)
T ss_pred             eEEEecCceeccCCCCceEEE-EEeCHHHH
Confidence            9999999999777654  355 44555443

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.78  E-value=4.3e-18  Score=169.29  Aligned_cols=159  Identities=17%  Similarity=0.206  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp  253 (435)
                      .++++.+++++|.+   .++++++|+.|+.+++. +.++++.        |+++++.|.++..    .+...|++++.++
T Consensus        50 ~~le~~la~l~g~~---~~l~~~sG~~al~~~l~-ll~~Gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd  117 (378)
T TIGR01329        50 TALESLLAKLDKAD---RAFAFSSGMAALDVITR-LLNNGDE--------IIAGDDLYGGTDRLLTQVVPRSGVVVVHVD  117 (378)
T ss_pred             HHHHHHHHHHhCCC---cEEEECCHHHHHHHHHH-HhCCCCE--------EEEcCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence            45566777888773   45677777889887765 5566655        9999999988654    4566799999998


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++     |+++++++++++|++|++++|+||+|.+.|+++|+++|++||+++++|++++....         ..+++   
T Consensus       118 ~~-----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~---------~~~l~---  180 (378)
T TIGR01329       118 TT-----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL---------CNPLE---  180 (378)
T ss_pred             CC-----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc---------CChhh---
Confidence            63     78999999999999999999999999999999999999999999999999854321         12332   


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      .|+|+++.|.|||++||.+  .|+++.+++++.+
T Consensus       181 ~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~  214 (378)
T TIGR01329       181 LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAK  214 (378)
T ss_pred             cCCcEEEEecceeccCCccceeEEEEeCcHHHHH
Confidence            3889999999999888766  7887777766533

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=5.1e-18  Score=168.47  Aligned_cols=201  Identities=14%  Similarity=0.054  Sum_probs=141.8

Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecCCC
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLTSS  257 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~~~  257 (435)
                      +.++++.+..   ++++++||++|+..++.++.+++|.        |+++++.|.++...    ...+|+++..++.+  
T Consensus        68 ~~iA~le~~~---~~~~~~sG~~Ai~~~l~all~~GD~--------Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~--  134 (394)
T PRK09028         68 AAIVELEGGA---GTALYPSGAAAISNALLSFLKAGDH--------LLMVDSCYEPTRDLCDKILKGFGIETTYYDPM--  134 (394)
T ss_pred             HHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEECCCcHHHHHHHHHhhhhcceEEEEECCC--
Confidence            4455555442   5789999999999999999888877        99999999886653    34568888777532  


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                         +.+.++++++++|++|++++|+||+|.+.++++|+++|+++|+++++|++|+..+.         ..|+   ..|+|
T Consensus       135 ---~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~---------~~Pl---~~GaD  199 (394)
T PRK09028        135 ---IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN---------SRPF---EMGVD  199 (394)
T ss_pred             ---CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc---------CCcc---ccCce
Confidence               45789999999999999999999999999999999999999999999999975321         1244   45999


Q ss_pred             EEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210        338 SISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY  415 (435)
Q Consensus       338 ~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~  415 (435)
                      ++..|.|||+.|+.+  .|+ ++.++++.+..... ....|.          ..  ..-.+|..++-  ...+.-|+++.
T Consensus       200 ivv~S~tK~l~Gh~d~~~G~-~~~~~~~~~~l~~~-~~~~G~----------~~--~p~~a~l~~rg--l~TL~lR~~~~  263 (394)
T PRK09028        200 ISIQAATKYIVGHSDVMLGT-ATANEKHWDQLREH-SYLMGQ----------CT--SPDDVYLAMRG--LRTLGVRLAQH  263 (394)
T ss_pred             EEEEeCCeEecCCCCEEEEE-EECCHHHHHHHHHH-HHhcCC----------CC--CHHHHHHHHcc--cCcHHHHHHHH
Confidence            999999999877743  254 45655543321111 111121          11  11356655544  44566666666


Q ss_pred             HHHHHHHHHhc
Q psy10210        416 HFNYKSCLQNL  426 (435)
Q Consensus       416 ~~~~~~~~~~l  426 (435)
                      .+.+....+.|
T Consensus       264 ~~na~~la~~L  274 (394)
T PRK09028        264 EKNALKVANWL  274 (394)
T ss_pred             HHHHHHHHHHH
Confidence            66655554443

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=3.2e-18  Score=170.93  Aligned_cols=160  Identities=18%  Similarity=0.156  Sum_probs=128.4

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+   .+++++||++|+.+++.++.++++.        |+++++.|.++..    .+...|++++.++.
T Consensus        69 ~Le~~lA~l~g~~---~~l~~~sgt~Ai~~~l~al~~~GD~--------Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~  137 (394)
T PRK07050         69 ALAQRLAEIEGGR---HALLQPSGLAAISLVYFGLVKAGDD--------VLIPDNAYGPNRDHGEWLARDFGITVRFYDP  137 (394)
T ss_pred             HHHHHHHHHhCCC---eEEEeccHHHHHHHHHHHHhCCCCE--------EEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence            3445677777753   6899999999999999999877776        9999999998653    56677999988864


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      .     +.++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+....            ......
T Consensus       138 ~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~------------~~~l~~  200 (394)
T PRK07050        138 L-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA------------FKPFEH  200 (394)
T ss_pred             C-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc------------cCHHHc
Confidence            2     45788999999999999999999999999999999999999999999999865432            122234


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      |+|+.+.|.+|+..+..+  .|+++.+++++.+.
T Consensus       201 GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~  234 (394)
T PRK07050        201 GVDISVQALTKYQSGGSDVLMGATITADAELHAK  234 (394)
T ss_pred             CCeEEEEECCceecCCCCeeEEEEEECCHHHHHH
Confidence            789999999999755544  57777777766543

>KOG2862|consensus

Probab=99.78  E-value=1.5e-17  Score=152.36  Aligned_cols=261  Identities=15%  Similarity=0.133  Sum_probs=203.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      |+..+...+.+++..     |.-.+.+|.+.++..++.+-+...|....+.-.++..+|+.+.+.|+..+..++|.    
T Consensus        24 GPsnl~~~V~~A~~~-----~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~----   94 (385)
T KOG2862|consen   24 GPSNLSGRVQEAMSR-----PSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDN----   94 (385)
T ss_pred             CCcCCCHHHHHhhcC-----CccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCe----
Confidence            333444555555543     44446678888999999999998888776666788888999999999999998887    


Q ss_pred             CCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccC-HHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDD-IGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~-i~~i~~la~  299 (435)
                          |++....-.+  +.+.+++.|++|..|+.+....+.++.+.+.+.. +++++++++..+.||+..| ++.+.++|+
T Consensus        95 ----vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~  170 (385)
T KOG2862|consen   95 ----VLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCH  170 (385)
T ss_pred             ----EEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhh
Confidence                8877776555  6677899999999999887788999999999976 5799999999999999977 788899999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc---c-----ccccc
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH---C-----QYFVT  371 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~---~-----~~~~~  371 (435)
                      +|+++++||.+-+-           +..+|.+.++|||+....++|.+.+|.|.|++.++++.+..   .     .+++.
T Consensus       171 k~~~lllVD~VaSl-----------ggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd  239 (385)
T KOG2862|consen  171 KHEALLLVDTVASL-----------GGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFD  239 (385)
T ss_pred             cCCeEEEEechhhc-----------CCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEe
Confidence            99999999998543           33478888999999999999999999999998888875421   1     22233


Q ss_pred             CCCCCCCC---CCCcc-ccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        372 SDWPGGNY---GSPSV-SGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       372 ~~~~gg~~---~~~~~-~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ..|.+-.|   +.+.. ..+.+...+.+..++|..+-++|+.+.++++.+..+.+...+++
T Consensus       240 ~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~  300 (385)
T KOG2862|consen  240 ILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEA  300 (385)
T ss_pred             HHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333222   22222 24556667778889999999999999999999988877666554

>PLN02242 methionine gamma-lyase

Probab=99.78  E-value=3.5e-18  Score=171.62  Aligned_cols=158  Identities=15%  Similarity=0.134  Sum_probs=124.5

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH-----HHcCCEEEEEe
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA-----NYFGMKVKHIR  253 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~-----~~~g~~v~~vp  253 (435)
                      ++.+.+++++|..   .+++|+||++|+.+++.++.++++.        |+++.+.|..+...+     +..|++++.++
T Consensus        80 ~LE~~lA~l~g~~---~~l~~~sG~~Ai~~al~al~~~GD~--------Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d  148 (418)
T PLN02242         80 NLGRQMAALEGTE---AAYCTASGMSAISSVLLQLCSSGGH--------VVASNTLYGGTHALLAHFLPRKCNITTTFVD  148 (418)
T ss_pred             HHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHHhCCCCE--------EEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence            4455778888775   4578999999999999999888877        999999998876654     34687877776


Q ss_pred             cCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      .     .|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+..             +..
T Consensus       149 ~-----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~-------------~~~  210 (418)
T PLN02242        149 I-----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL-------------SPA  210 (418)
T ss_pred             C-----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC-------------CHH
Confidence            4     289999999988 499999999999999999999999999999999999999965432             112


Q ss_pred             CCCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        333 LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      ..|+|+++.|++|+..++..  .|+ ++.++++.+.
T Consensus       211 ~~g~divv~S~SK~l~g~g~~~gG~-iv~~~~li~~  245 (418)
T PLN02242        211 RLGADVVVHSISKFISGGADIIAGA-VCGPAELVNS  245 (418)
T ss_pred             HcCCcEEEEeCccccCCCCCceEEE-EEcCHHHHHH
Confidence            23689999999999544432  366 4455555443

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.78  E-value=5e-18  Score=169.04  Aligned_cols=158  Identities=18%  Similarity=0.134  Sum_probs=125.2

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTS  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~  256 (435)
                      +++.+++++|.+   .+++++||++|+..++.++..+++.        |+++.+.|.+....+   ...|++++.++   
T Consensus        58 lE~~lA~l~g~~---~~l~~~sG~~Ai~~~l~~ll~~GD~--------Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~---  123 (385)
T PRK08574         58 LEEALAKLEGGV---DALAFNSGMAAISTLFFSLLKAGDR--------VVLPMEAYGTTLRLLKSLEKFGVKVVLAY---  123 (385)
T ss_pred             HHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHHhCCCCE--------EEEcCCCchhHHHHHHHhhccCcEEEEEC---
Confidence            445677777753   5678899999999999998877776        999999999977665   34577776653   


Q ss_pred             CccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        257 SYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                         +|++++++++++ ++++|++++|+||+|.+.|+++|.++|+++|+++++|++++..+.         ..+.   ..|
T Consensus       124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~---------~~~l---~~G  188 (385)
T PRK08574        124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLL---------YRPL---RHG  188 (385)
T ss_pred             ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc---------CChh---hhC
Confidence               368899999988 899999999999999999999999999999999999999864322         1122   357


Q ss_pred             ccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      +|+++.|++|++.||..  .|+++++++++.+.
T Consensus       189 aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~  221 (385)
T PRK08574        189 ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEE  221 (385)
T ss_pred             CcEEEeeCceeecCCCCceeEEEEECcHHHHHH
Confidence            89999999999766643  36567777765443

>PLN02672 methionine S-methyltransferase

Probab=99.78  E-value=2.2e-17  Score=178.57  Aligned_cols=165  Identities=14%  Similarity=0.151  Sum_probs=125.3

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~  271 (435)
                      +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++  +++.+|++++++++.+
T Consensus       755 e~IIvt~Gs~elL~lll~aLl~pGD~--------VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~  826 (1082)
T PLN02672        755 TEFVYGDTSLALFNKLVLCCVQEGGT--------LCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET  826 (1082)
T ss_pred             CEEEEeCCHHHHHHHHHHHHcCCCCE--------EEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc
Confidence            47999999999999999999988887        9999999999999999999999999996  3678999999999976


Q ss_pred             -CceEEEEeCCC-CCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC--CCCC--C-CccEEEe
Q psy10210        272 -NTVMLVGSMPN-FPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF--DFSL--P-GVTSISV  341 (435)
Q Consensus       272 -~~~~v~~~~p~-nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~--d~~~--~-gvd~~~~  341 (435)
                       +++++++++|| ||||.+   +.+++|+++|++||++||+|++|+++.+...........+.  .+..  + ...++..
T Consensus       827 ~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~  906 (1082)
T PLN02672        827 VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLG  906 (1082)
T ss_pred             CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEe
Confidence             45689999997 999999   78999999999999999999999977652100000000000  0000  0 1234455


Q ss_pred             cCCC-CCCccCCcEEEEEeCCccccc
Q psy10210        342 DTHK-YGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       342 s~hK-~~~~p~g~g~il~~~~~~~~~  366 (435)
                      |+.| ++.++..+|+++..++++.+.
T Consensus       907 SfSKkf~lpGLRIGylIap~~eLi~~  932 (1082)
T PLN02672        907 GLSTELLSGGHEFGFLALNDSVLIDA  932 (1082)
T ss_pred             CcHHhhccHHHHheeEEeCCHHHHHH
Confidence            7775 555567789977666555543

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.78  E-value=2.6e-17  Score=162.82  Aligned_cols=251  Identities=14%  Similarity=0.062  Sum_probs=160.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+..+..... .+....+......++++.++++++.+  +.+++++| ++++..++.++.++++.     
T Consensus        32 ~~~v~~a~~~~~~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~G-~~~~~~~l~~~~~~gd~-----  102 (360)
T TIGR00858        32 HPEVIQAAQQGAEQYGAGST-ASRLVSGNSPLHEELEEELAEWKGTE--AALLFSSG-YLANVGVISALVGKGDL-----  102 (360)
T ss_pred             CHHHHHHHHHHHHhcCCCCC-CcCcccCCcHHHHHHHHHHHHHhCCC--CEEEECch-HHHHHHHHHHhCCCCCE-----
Confidence            46777777776654321110 01111222345566777788877743  25566555 67777777777666555     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                         |++++|+|+++...++..|++++.++.     +|++++++.+++    +++++++.+++|++|.+.++++|.++|++
T Consensus       103 ---v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~  174 (360)
T TIGR00858       103 ---ILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAER  174 (360)
T ss_pred             ---EEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHH
Confidence               999999999999999999999988873     588899988864    47899999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      +|+++|+|++|+.+.+..   .+.+.. ..+....+.+++..|++|+ +++.| |+++ .++++.+........|.    
T Consensus       175 ~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~-~~~~g-G~~~-~~~~~~~~~~~~~~~~~----  244 (360)
T TIGR00858       175 YGAWLMVDDAHGTGVLGE---DGRGTLEHFGLKPEPVDIQVGTLSKA-LGSYG-AYVA-GSQALIDYLINRARTLI----  244 (360)
T ss_pred             cCcEEEEECcccccCcCC---CCCchHHhcCCCccCCcEEEEechhh-hhccC-cEEE-cCHHHHHHHHHhCccce----
Confidence            999999999997654321   011100 1122223578889999998 56666 7744 45554433111111111    


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                          ..++.+...++++.++++.+.. +...++.++..+.+.+.++++
T Consensus       245 ----~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~  288 (360)
T TIGR00858       245 ----FSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL  288 (360)
T ss_pred             ----ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence                1112222333455566654432 345666777777777776664

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.78  E-value=7.9e-18  Score=168.08  Aligned_cols=160  Identities=16%  Similarity=0.152  Sum_probs=125.5

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+.   .+++++|+.|+.+++.++..+++.        |+++.+.|.+    +...+...|++++.+++
T Consensus        63 ~le~~lA~l~g~~~---av~~~sG~~Ai~~~l~al~~~Gd~--------Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~  131 (391)
T TIGR01328        63 NLEGRIAFLEGTEA---AVATSSGMGAIAATLLTILKAGDH--------LISDECLYGCTFALLEHALTKFGIQVDFINM  131 (391)
T ss_pred             HHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCE--------EEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence            34457788887753   578888899999999988777776        9999998765    44555667999988886


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +     |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+..      +   .++   ..
T Consensus       132 ~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~------~---~~~---~~  194 (391)
T TIGR01328       132 A-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML------T---NPV---AL  194 (391)
T ss_pred             C-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc------C---Cch---hc
Confidence            4     78999999999999999999999999999999999999999999999999975432      1   122   34


Q ss_pred             CccEEEecCCCCCCccCC-cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG-SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g-~g~il~~~~~~~~~  366 (435)
                      ++|+++.|++|++.++.+ .|.+++.++++.+.
T Consensus       195 g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~  227 (391)
T TIGR01328       195 GVDVVVHSATKYIGGHGDVVAGLICGKAELLQQ  227 (391)
T ss_pred             CCCEEEccccccccCCCCceEEEEEcCHHHHHH
Confidence            789999999999655433 23346666665543

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.78  E-value=1.6e-17  Score=164.41  Aligned_cols=156  Identities=14%  Similarity=0.175  Sum_probs=116.7

Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHH
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSA  268 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~  268 (435)
                      +++ ++++|+|+++++.++++++.++++.        |++++|+|..+...+...|++++.+|++  +++.+|++++++.
T Consensus        81 ~~~-~I~it~G~~~al~~~~~~~~~~gd~--------V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~  151 (357)
T PRK14809         81 SPE-QVWLANGGDGALDYLARAMLDPGDT--------VLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDA  151 (357)
T ss_pred             Ccc-eEEECCCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHh
Confidence            443 8999999999999999999888877        9999999999998899999999999986  3467788888776


Q ss_pred             hhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCC-CCCCCccEEEecCCC
Q psy10210        269 ITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGVTSISVDTHK  345 (435)
Q Consensus       269 i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gvd~~~~s~hK  345 (435)
                      . ++++++++++||||||.+-+.+++.++++..  ++++|+||+|+.+...     +   .... .....-.++..|+.|
T Consensus       152 ~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~-----~---~~~~~~~~~~~vi~~~SfSK  222 (357)
T PRK14809        152 Y-DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAER-----P---SAVALVEERDDVAVLRTFSK  222 (357)
T ss_pred             h-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCC-----c---hhHHHHhhCCCEEEEecchh
Confidence            5 4688999999999999996666666655543  7899999999987531     1   0111 111122455668899


Q ss_pred             CCC-ccCCcEEEEEeCCcccc
Q psy10210        346 YGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       346 ~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ... ....+|+++.. +++.+
T Consensus       223 ~~~~~GlRiG~~~~~-~~~~~  242 (357)
T PRK14809        223 AYGLAGLRLGYAVVP-EEWAD  242 (357)
T ss_pred             HhcCcchhheeeecC-HHHHH
Confidence            843 34678996654 44544

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.78  E-value=2.3e-17  Score=161.95  Aligned_cols=202  Identities=16%  Similarity=0.097  Sum_probs=143.6

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +..+.|.. .++.++++.+.+.+....      ...| +..|.+++++++++++.                         
T Consensus        23 l~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~Y-~~~g~~~lr~~ia~~~~-------------------------   69 (337)
T PRK03967         23 LDKNENPF-DLPEELKEEIFEELKRVP------FNRY-PHITSDPLREAIAEFYG-------------------------   69 (337)
T ss_pred             ecCCCCCC-CCCHHHHHHHHHHhhcCc------cccC-CCCCHHHHHHHHHHHhC-------------------------
Confidence            33344443 334567777766554311      1122 23467777777776653                         


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccH
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDL  262 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~  262 (435)
                             .++ +++++|+|+++++.+++.++  +++.        |++++|+|..+...++..|++++.+|+++++.+|+
T Consensus        70 -------~~~-~~I~~t~G~~~~l~~~~~~~--~gd~--------V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  131 (337)
T PRK03967         70 -------LDA-ENIAVGNGSDELISYLVKLF--EGKH--------IVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDG  131 (337)
T ss_pred             -------cCc-ceEEEcCCHHHHHHHHHHHh--CCCe--------EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCH
Confidence                   234 38999999999999887765  4555        99999999999999999999999999987788999


Q ss_pred             HHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEec
Q psy10210        263 AALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD  342 (435)
Q Consensus       263 ~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s  342 (435)
                      +++++.+ ++++++++++|+||||.+-+.++|.++++ +++++|+|++|..|...     ..  .+. .....-.+++.|
T Consensus       132 ~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~-----~~--~~~-~~~~~~vi~l~S  201 (337)
T PRK03967        132 ERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGK-----SL--IGL-IDEYPNLILLRT  201 (337)
T ss_pred             HHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhccc-----ch--HHH-HhhCCCEEEEec
Confidence            9998865 57889999999999999999999999995 79999999999876420     00  011 001112456678


Q ss_pred             CCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        343 THKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       343 ~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      +.|... +...+|+++. ++++.+.
T Consensus       202 ~SK~~~l~GlRiG~iv~-~~~~i~~  225 (337)
T PRK03967        202 FSKAFGLAGIRAGYAIA-NEEIIDA  225 (337)
T ss_pred             chHhhcchhhhheeeec-CHHHHHH
Confidence            999843 4467899665 4555443

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.78  E-value=3.1e-17  Score=162.94  Aligned_cols=163  Identities=19%  Similarity=0.188  Sum_probs=122.2

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-S  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~  257 (435)
                      +.+++++++|.   +.+++|+|||+|+.+++.++ ..++++        |++++++|.++..++...|++++.+++++ +
T Consensus        36 ~e~~la~~~g~---~~~v~~~sgt~aL~~~l~al~~~pGd~--------Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~  104 (376)
T TIGR02379        36 CETWLENRTGT---KKALLTPSCTAALEMAALLLDIQPGDE--------VIMPSYTFVSTANAFVLRGAKIVFVDIRPDT  104 (376)
T ss_pred             HHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHcCCCCcCE--------EEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence            33445555554   26899999999999999887 556665        99999999999999999999999999984 4


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      +.+|+++++++++++|++|+   |+||+|...++++|.++|++||+++|+|++|+.+.. +.   |.   +.. ..  .|
T Consensus       105 ~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~-~~---~~---~~g-~~--~~  171 (376)
T TIGR02379       105 MNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMST-YK---GR---ALG-SI--GH  171 (376)
T ss_pred             CCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCc-cC---Cc---ccC-CC--CC
Confidence            78999999999999999987   566799999999999999999999999999975432 11   11   111 00  14


Q ss_pred             EEEecCC--CCCCccCCcEEEEEeCCccccc
Q psy10210        338 SISVDTH--KYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       338 ~~~~s~h--K~~~~p~g~g~il~~~~~~~~~  366 (435)
                      +.++|+|  |.+......|+++++++++.+.
T Consensus       172 ~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~  202 (376)
T TIGR02379       172 LGTFSFHETKNYTSGGEGGALLINDQAFIER  202 (376)
T ss_pred             EEEEeCCCCCcCcccCCceEEEECCHHHHHH
Confidence            4555544  4432221347778888776554

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK07908 hypothetical protein; Provisional

Probab=99.78  E-value=4.2e-17  Score=160.96  Aligned_cols=149  Identities=13%  Similarity=0.079  Sum_probs=110.9

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNT  273 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~  273 (435)
                      +++++|+|+++++.+++. + .+ +.        +++..|+|..+...++..|++++.+|+++++.+|++++    .+++
T Consensus        76 ~~I~it~Ga~~al~~~~~-l-~~-~~--------viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~~~~  140 (349)
T PRK07908         76 DEVLLLAGAAEGFALLAR-L-RP-RR--------AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----PDDA  140 (349)
T ss_pred             hhEEECCCHHHHHHHHHh-c-CC-Ce--------EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----ccCC
Confidence            389999999999998887 3 33 23        78889999999999999999999999986678888754    4578


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-ccCC
Q psy10210        274 VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKG  352 (435)
Q Consensus       274 ~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g  352 (435)
                      +++++++||||||.+-+.++|.++|++ +.++|+|++|+.+..      +. .+++.-....-.++..|++|... .+..
T Consensus       141 ~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~------~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlR  212 (349)
T PRK07908        141 DLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVP------GE-PESLAGDDLPGVLVLRSLTKTWSLAGLR  212 (349)
T ss_pred             CEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhcc------CC-ccccccccCCCEEEEeecccccCCccce
Confidence            899999999999999999999999964 789999999987632      11 11111111122344448999632 4456


Q ss_pred             cEEEEEeCCccccc
Q psy10210        353 SSVVLYRDLKYKHC  366 (435)
Q Consensus       353 ~g~il~~~~~~~~~  366 (435)
                      +|+++. ++++.+.
T Consensus       213 iG~~~~-~~~~~~~  225 (349)
T PRK07908        213 VGYALG-APDVLAR  225 (349)
T ss_pred             eeeeec-CHHHHHH
Confidence            799664 4555443

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.77  E-value=2e-17  Score=164.43  Aligned_cols=168  Identities=17%  Similarity=0.110  Sum_probs=124.1

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.+++.++.+++ ++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|.++++ 
T Consensus        72 Lr~~ia~~~~~~~~-~I~it~G~~~~l~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~-  141 (369)
T PRK08153         72 LRHALAAHHGVAPE-NIMVGEGIDGLLGLIVRLYVEPGDP--------VVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR-  141 (369)
T ss_pred             HHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence            34444444455554 8999999999999999998888776        9999999999999999999999999987554 


Q ss_pred             ccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        260 VDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       260 ~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      +|++++++.+. .+++++++++|+||||.+-+.+++.++++.  +++++++||+|+.+...     + ...+++.. ..-
T Consensus       142 ~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~-----~-~~~~~~~~-~~~  214 (369)
T PRK08153        142 EDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPA-----G-AAPPIDTD-DPN  214 (369)
T ss_pred             CCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCc-----c-cchhhhhc-CCC
Confidence            89999887664 678999999999999999666666666554  38999999999876531     1 01122211 123


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .++..|+.|..+ +...+|+++. ++++.+
T Consensus       215 ~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~  243 (369)
T PRK08153        215 VIRMRTFSKAYGLAGARVGYAIG-APGTIK  243 (369)
T ss_pred             EEEEecchHhccCcchheeeeec-CHHHHH
Confidence            466778999843 3456799665 445543

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.77  E-value=1.2e-17  Score=163.66  Aligned_cols=167  Identities=13%  Similarity=0.076  Sum_probs=122.5

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      .++++.+++.+|.++. ++++|+|+++++.+++.. .+++ .        |++++|+|+.+...++..|++++.+|+++ 
T Consensus        43 ~~lr~~ia~~~~~~~~-~I~it~Gs~~~l~~~~~~-~~~~-~--------vv~~~P~y~~y~~~~~~~G~~v~~vp~~~-  110 (332)
T PRK06425         43 TDIEDQIKIYTQGLKI-KVLIGPGLTHFIYRLLSY-INVG-N--------IIIVEPNFNEYKGYAFTHGIRISALPFNL-  110 (332)
T ss_pred             HHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHH-hCCC-c--------EEEeCCChHHHHHHHHHcCCeEEEEeCCc-
Confidence            3555666677777655 899999999999999864 4432 3        88889999999999999999999999874 


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SL  333 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~  333 (435)
                      ...|.+.+++   .+++++++++||||||.+   +.+++|.++|++|++++++||+|..|...     +.. ..... ..
T Consensus       111 ~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~-----~~~-~~~~~~~~  181 (332)
T PRK06425        111 INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPN-----RAE-EDVLLNRS  181 (332)
T ss_pred             ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccc-----cch-hHHHHhcc
Confidence            3456555543   478999999999999998   56888899999999999999999988541     100 00111 11


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      .+-.+++.|+.|..+ +...+|+++. ++++.+.
T Consensus       182 ~~~vi~~~SfSK~~~l~GlRiGy~v~-~~~li~~  214 (332)
T PRK06425        182 YGNVIIGRSLTKILGIPSLRIGYIAT-DDYNMKI  214 (332)
T ss_pred             CCCEEEEeecHHhcCCchhhheeeec-CHHHHHH
Confidence            123566678999743 4466899655 4555443

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.77  E-value=1.1e-17  Score=166.88  Aligned_cols=211  Identities=14%  Similarity=0.083  Sum_probs=141.4

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+   ..+++++|+.++.+++.++.++++.        |+++.+.|.+....+    ...|+++..++.
T Consensus        65 ~Le~~lA~l~G~~---~al~~~sG~~Ai~~~l~al~~~Gd~--------Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~  133 (386)
T PRK06767         65 LFEERMAVLEGGE---EALAFGSGMAAISATLIGFLKAGDH--------IICSNGLYGCTYGFLEVLEEKFMITHSFCDM  133 (386)
T ss_pred             HHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence            3455777788763   3466677788999999988877776        999999888754443    334666665543


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++|+|++|+....         ..++   ..
T Consensus       134 -----~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~---------~~pl---~~  196 (386)
T PRK06767        134 -----ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL---------QRPL---EL  196 (386)
T ss_pred             -----CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---hc
Confidence                 378999999999999999999999999999999999999999999999999864322         1132   34


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHH-HHHH
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA-QVWI  411 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g-~~~~  411 (435)
                      |+|+++.|++|++.++..  .|+++.+++.+.+........ .|+.         -+   ...+|+.++.+..-. -.++
T Consensus       197 g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~-~g~~---------~~---~~~a~l~~~~L~tl~~r~~~  263 (386)
T PRK06767        197 GCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKD-IGGI---------MA---PFDAWLLLRGLKTLAVRMDR  263 (386)
T ss_pred             CCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHH-hCCC---------CC---HHHHHHHHcCCCcHHHHHHH
Confidence            789999999999655433  466555443332211111111 1211         01   124565655554322 2244


Q ss_pred             HHHHHHHHHHHHHhcCCcc
Q psy10210        412 CVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       412 ~~~~~~~~~~~~~~l~~l~  430 (435)
                      .++..+.+.+.+++.+++.
T Consensus       264 ~~~~a~~la~~L~~~p~v~  282 (386)
T PRK06767        264 HCDNAEKIVSFLKNHDAVE  282 (386)
T ss_pred             HHHHHHHHHHHHHcCCCcc
Confidence            4555555666667777765

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.77  E-value=8.5e-18  Score=168.01  Aligned_cols=160  Identities=15%  Similarity=0.094  Sum_probs=124.4

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+   ..+++++|++|+.+++.++..+++.        |+++.+.|.+...    .+...|++++.++.
T Consensus        68 ~le~~lA~l~g~~---~~i~~ssG~~Ai~~~l~all~~GD~--------Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~  136 (398)
T PRK08249         68 AFEEKVRILEGAE---AATAFSTGMAAISNTLYTFLKPGDR--------VVSIKDTYGGTNKIFTEFLPRMGVDVTLCET  136 (398)
T ss_pred             HHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence            4455777778764   3577777899999999988877776        9999999997543    45567888877663


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+..         ..+.   ..
T Consensus       137 -----~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~---------~~~l---~~  199 (398)
T PRK08249        137 -----GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN---------QNPL---AL  199 (398)
T ss_pred             -----CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc---------CCch---hh
Confidence                 589999999999999999999999999999999999999999999999999975432         1122   24


Q ss_pred             CccEEEecCCCCCCccC-CcEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPK-GSSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~  366 (435)
                      ++|+++.|++|+..++. ..|.+++.++++.+.
T Consensus       200 ~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~  232 (398)
T PRK08249        200 GADLVIHSATKFLSGHADALGGVVCGSKELMEQ  232 (398)
T ss_pred             CCCEEeccCceecCCCCCceEEEEECCHHHHHH
Confidence            78999999999964443 233446666665543

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.77  E-value=7.9e-18  Score=167.23  Aligned_cols=158  Identities=21%  Similarity=0.158  Sum_probs=124.5

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEecC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRLT  255 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~~  255 (435)
                      +.+.+++++|.+   ..+++++|++|+..++.++..+++.        |+++.+.|.+...    .+...|+++..++.+
T Consensus        45 le~~la~l~g~~---~a~~~~sG~~Ai~~~l~~l~~~gd~--------Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  113 (369)
T cd00614          45 LEKKLAALEGGE---AALAFSSGMAAISTVLLALLKAGDH--------VVASDDLYGGTYRLFERLLPKLGIEVTFVDPD  113 (369)
T ss_pred             HHHHHHHHHCCC---CEEEEcCHHHHHHHHHHHHcCCCCE--------EEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence            444666777653   4678888999999999999877776        9999999988553    345678898888754


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                           |++++++++++++++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+..         ..++   ..|
T Consensus       114 -----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~---------~~~~---~~g  176 (369)
T cd00614         114 -----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL---------QRPL---ELG  176 (369)
T ss_pred             -----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc---------CChh---hhC
Confidence                 58999999988999999999999999999999999999999999999999876532         1123   237


Q ss_pred             ccEEEecCCCCCCccC--CcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGFTPK--GSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~--g~g~il~~~~~~~~  365 (435)
                      +|+++.|++|++.++.  ..|+++.+++++.+
T Consensus       177 ~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~  208 (369)
T cd00614         177 ADIVVHSATKYIGGHSDVIAGVVVGSGEALIQ  208 (369)
T ss_pred             CcEEEeccceeccCCCCceEEEEEeCcHHHHH
Confidence            8999999999965543  25776655535543

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=4.8e-17  Score=158.06  Aligned_cols=232  Identities=18%  Similarity=0.125  Sum_probs=156.3

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK  248 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~  248 (435)
                      .|.++++|+    .+++++|..   ..+.+++||.|+.++++++. .++|        +||+|+-+|.+...++.+.|++
T Consensus        33 G~~v~~FE~----~~ae~~G~k---~ava~~sgT~AL~laL~al~ig~GD--------eVI~ps~TfvATan~i~~~Ga~   97 (374)
T COG0399          33 GPFVRRFEQ----AFAEYLGVK---YAVAVSSGTAALHLALLALAIGPGD--------EVIVPSFTFVATANAVLLVGAK   97 (374)
T ss_pred             ChHHHHHHH----HHHHHhCCC---eEEEecChHHHHHHHHHhcCCCCCC--------EEEecCCchHHHHHHHHHcCCe
Confidence            344555554    667777775   46889999999999999763 4555        4999999999999999999999


Q ss_pred             EEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        249 VKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       249 v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.|++| +++.+|++.+|++|+++|++|+..+-   .|...++++|.++|++||++||+|+|++-+..-    .|...-
T Consensus        98 PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y----~gk~vG  170 (374)
T COG0399          98 PVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAHGATY----KGKKVG  170 (374)
T ss_pred             EEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHcCCeEEEEcchhccCee----cCcccc
Confidence            9999999 67999999999999999999997765   788899999999999999999999999765431    111100


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC----CCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP----GGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~----gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      .+    ..+-++|+-.+|.+... ..|+++++|+++.+........-.    .-.|....+...-+-..+.++....+.-
T Consensus       171 t~----Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~  245 (374)
T COG0399         171 SF----GDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLE  245 (374)
T ss_pred             cc----cceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHH
Confidence            11    12567777788986444 458888888877654221110000    0011111111111222222333222222


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ..+.+.++-+++.+.+.+.+++++.
T Consensus       246 ~l~~~~~~R~~~a~~Y~~~l~~~~~  270 (374)
T COG0399         246 RLDEINERRREIAQIYAEALKGLPG  270 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            3455666666666666666666654

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.77  E-value=2.2e-17  Score=165.87  Aligned_cols=244  Identities=16%  Similarity=0.099  Sum_probs=164.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+...... .   ++  .....++.+.++++++.+..+++++++||++|+..+++.++.+++.    
T Consensus        60 ~~p~v~~ai~~~~~~~~~~~~-~---~~--~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~----  129 (398)
T PRK03244         60 AHPAVVEAVTRQLATLGHVSN-L---FA--TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRT----  129 (398)
T ss_pred             CCHHHHHHHHHHHHhccCccC-c---cC--CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCC----
Confidence            368999999998886432111 1   11  1223577788888887543348999999999999999998876532    


Q ss_pred             CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD  290 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~  290 (435)
                         +|+..+++|+++...+.. .|.            ++..+|.     .|++++++.+.+++++|+++.++||+|.+.+
T Consensus       130 ---~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aviiep~~~~~G~~~~  201 (398)
T PRK03244        130 ---KIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAVFLEPIQGEAGVVPP  201 (398)
T ss_pred             ---eEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcCCeEEEEEecccCCCCCcCC
Confidence               477777788876444332 232            2223332     3789999998778999999999999999854


Q ss_pred             ----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        291 ----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       291 ----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                          +++|.++|++||+++|+||+|++|..     .|   ..+.+...+  .|+++++  |.+.++.++|+++.+++ +.
T Consensus       202 ~~~~l~~l~~l~~~~~~llI~DEv~~g~gr-----~g---~~~~~~~~~~~pDi~t~s--K~l~~G~~ig~~~~~~~-~~  270 (398)
T PRK03244        202 PAGYLAAAREITDRHGALLVLDEVQTGIGR-----TG---AWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFGP-AA  270 (398)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccCCcc-----cc---hHHhhhhhCCCCCEEEEc--hhhhCCcccEEEEEcHH-HH
Confidence                89999999999999999999987632     12   112111122  4776664  98655567899777654 43


Q ss_pred             cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +..   .....+.+     ..+  +....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       271 ~~~---~~~~~~~t-----~~~--~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~  322 (398)
T PRK03244        271 DLL---TPGLHGST-----FGG--NPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL  322 (398)
T ss_pred             hhc---cCCCCcCC-----CCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc
Confidence            321   11112222     222  22334677778887877888999999988888888765

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.77  E-value=1.8e-17  Score=165.21  Aligned_cols=160  Identities=20%  Similarity=0.204  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp  253 (435)
                      .++++.+++++|.+   .++++++|++|+.+++.++.++++.        |+++.+.|.+    +...+...|++++.++
T Consensus        57 ~~le~~la~l~g~~---~~~~~~sG~~Ai~~al~al~~~Gd~--------Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~  125 (380)
T TIGR01325        57 AAFEERIAALEGAE---RAVATATGMSAIQAALMTLLQAGDH--------VVASRSLFGSTVGFISEILPRFGIEVSFVD  125 (380)
T ss_pred             HHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEecCCcchHHHHHHHHHHHhCCEEEEEC
Confidence            34556777788773   4688999999999999998877776        9999988865    3445677899999988


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      .+     |++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+..         ..++   .
T Consensus       126 ~~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~---------~~pl---~  188 (380)
T TIGR01325       126 PT-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL---------QQPL---K  188 (380)
T ss_pred             CC-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---h
Confidence            64     78999999988999999999999999999999999999999999999999975432         1133   3


Q ss_pred             CCccEEEecCCCCCCccC-CcEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGFTPK-GSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~~  365 (435)
                      .|+|+++.|++|++.++. ..|.+++.++++.+
T Consensus       189 ~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~  221 (380)
T TIGR01325       189 LGADVVVYSATKHIDGQGRVMGGVIAGSEELMA  221 (380)
T ss_pred             hCCCEEEeeccceecCCCCeEEEEEEeCHHHHH
Confidence            378999999999965542 23333555555443

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.77  E-value=1.3e-16  Score=156.78  Aligned_cols=259  Identities=16%  Similarity=0.122  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC
Q psy10210        115 LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET  194 (435)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~  194 (435)
                      +..++.+++....++.+   +...|-....+|.++++..+.+..+.           +..++..++++.+|+++|.+++ 
T Consensus         8 ~~~~~~~~~~~~~~~~~---~~~~ylgl~~~~~~~~~~~~~~~~~~-----------g~~~~~~~Le~~lA~~~g~~~e-   72 (346)
T TIGR03576         8 EKALEIIREKISRGGRD---SLYDLTGLAGGFKIDEEDLELLETYV-----------GPAIFEEKVQELGREHLGGPEE-   72 (346)
T ss_pred             HHHHHHHHHHHhccCCc---cccccccCCCChhHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHcCCCcc-
Confidence            34455666655554322   22233344458999999998888762           3448888999999999999765 


Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEe---CCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLP---TTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG  271 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~---~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~  271 (435)
                      ++++++||++++..++.++.++++.        |+++   .|+|+++...++..|+++...       .|+++++.  .+
T Consensus        73 ~ilv~~gg~~a~~~~~~al~~~gd~--------Vli~~~d~p~~~s~~~~~~l~ga~~~~~-------~~l~~l~~--~~  135 (346)
T TIGR03576        73 KILVFNRTSSAILATILALEPPGRK--------VVHYLPEKPAHPSIPRSCKLAGAEYFES-------DELSELKK--ID  135 (346)
T ss_pred             eEEEECCHHHHHHHHHHHhCCCCCE--------EEECCCCCCCchhHHHHHHHcCCEEecc-------CCHHHHhh--Cc
Confidence            8999999999999999999888776        8864   579999999999999986332       24454433  24


Q ss_pred             CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC
Q psy10210        272 NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF  348 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~  348 (435)
                      ++++|+++. ++++|.+   +++++|+++|++||+++++|++|+.++....   +.+  +  ....++|+++.+++|++.
T Consensus       136 ~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~---~~~--~--~~~~~~divv~s~SKala  207 (346)
T TIGR03576       136 GTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLY---GQP--P--ALDLGADLVVTSTDKLMD  207 (346)
T ss_pred             CceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccC---CCC--C--HHHcCCcEEEeccchhcc
Confidence            678888765 6889998   8999999999999999999999987754210   111  1  112357888899999643


Q ss_pred             ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        349 TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       349 ~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      |+. .|+++ .++++.+........|..          +-+....+++.++++.+..+...+..++..+.+.+++++
T Consensus       208 G~r-~G~v~-~~~~li~~l~~~~~~~~~----------s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~  272 (346)
T TIGR03576       208 GPR-GGLLA-GRKELVDKIKSVGEQFGL----------EAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK  272 (346)
T ss_pred             ccc-eEEEE-eCHHHHHHHHHhhcCccc----------CccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence            554 57755 555555443323333211          112223345566666655555555555555555555543

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>KOG0256|consensus

Probab=99.77  E-value=7.8e-18  Score=159.48  Aligned_cols=196  Identities=15%  Similarity=0.151  Sum_probs=150.5

Q ss_pred             CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      ....+..|+|.+.+++++++.+..... |+...                       +|+ ++++|+|+|.++...+-.+.
T Consensus       113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~-~~v~f-----------------------dP~-~~Vv~~G~T~ane~l~fcLa  167 (471)
T KOG0256|consen  113 ELAMFQDYHGLPSFRQAVAEFMERARG-NRVKF-----------------------DPE-RVVVTNGATSANETLMFCLA  167 (471)
T ss_pred             hHhhcccccCchHHHHHHHHHHHHHhC-CCCcc-----------------------Ccc-ceEEecccchhhHHHHHHhc
Confidence            344567889999999999999987543 33332                       444 79999999999999999999


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CCEEEEEecC--CCccccHHHHHHHhhc------CceEEEEeCCCCCc
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANYF-GMKVKHIRLT--SSYTVDLAALQSAITG------NTVMLVGSMPNFPY  285 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~~v~~vp~~--~~~~~d~~~l~~~i~~------~~~~v~~~~p~npt  285 (435)
                      ++|+.        .++|.|.|+++..-++.. |++++.|.++  ++++++++++|+++.+      +++.|++++|+||.
T Consensus       168 dpgda--------fLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPL  239 (471)
T KOG0256|consen  168 DPGDA--------FLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPL  239 (471)
T ss_pred             CCCce--------eeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCC
Confidence            99998        999999999998777665 8899888886  6789999999988863      67999999999999


Q ss_pred             ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-----CCCCCCCCccEEEecCCCCCC-ccCCcEEE
Q psy10210        286 GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-----PFDFSLPGVTSISVDTHKYGF-TPKGSSVV  356 (435)
Q Consensus       286 G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-----~~d~~~~gvd~~~~s~hK~~~-~p~g~g~i  356 (435)
                      |++   +.+..+.++|.++++.+|+||+|++-++...   ++...     ..++ .+.-.-+..|..|=++ .+...|++
T Consensus       240 G~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~---~F~Sv~ev~~~~~~-~~~rvHivyslSKD~GlpGfRvGvi  315 (471)
T KOG0256|consen  240 GTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKS---EFRSVLEVRKDPHL-DPDRVHIVYSLSKDFGLPGFRVGVI  315 (471)
T ss_pred             CCccCHHHHHHHHHHHhhcceEEEeehhhcccccCcc---CceEHHHHhhcccc-CCCcEEEEEEeccccCCCceEEEEE
Confidence            999   6677888889999999999999998776311   21100     0111 2233456677888633 33567998


Q ss_pred             EEeCCcccccc
Q psy10210        357 LYRDLKYKHCQ  367 (435)
Q Consensus       357 l~~~~~~~~~~  367 (435)
                      +..+++.....
T Consensus       316 YS~ne~VvsaA  326 (471)
T KOG0256|consen  316 YSNNEDVVSAA  326 (471)
T ss_pred             EecChHHHHHH
Confidence            88877766543

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.76  E-value=7.1e-17  Score=161.71  Aligned_cols=252  Identities=19%  Similarity=0.090  Sum_probs=164.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.......      ...+...++.+.++++.+.   +++++++||++|+..++++++..... +|.
T Consensus        48 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~la~~l~~~~~~---~~v~~~~sGseA~~~al~~ar~~~~~-~G~  117 (389)
T PRK01278         48 AHPHLVEALKEQAEKLWHVSNL------YRIPEQERLAERLVENSFA---DKVFFTNSGAEAVECAIKTARRYHYG-KGH  117 (389)
T ss_pred             CCHHHHHHHHHHHHhcCccccc------cCChHHHHHHHHHHhhCCC---CEEEEcCCcHHHHHHHHHHHHHHHHh-cCC
Confidence            4899999999998763222111      1234455666777777632   37999999999999999999765322 332


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcCCEEEEE----ecCCCcc----ccHHHHHHHhhcCceEEEEeCCCCCcccc----cC
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFGMKVKHI----RLTSSYT----VDLAALQSAITGNTVMLVGSMPNFPYGTM----DD  290 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g~~v~~v----p~~~~~~----~d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~  290 (435)
                       .+++|++.++.|+++...+...+......    |..+++.    .|++++++++++++++|+++.+++++|..    ++
T Consensus       118 ~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~  197 (389)
T PRK01278        118 PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEF  197 (389)
T ss_pred             CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHH
Confidence             34679999999998776665554332221    2112222    58999999998899999999988888843    68


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQY  368 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~  368 (435)
                      +++|.++|++||+++|+||+|+++...     |.   .+.....+  .|++++  .|.+.+....|+++.+++ +.+.. 
T Consensus       198 l~~l~~l~~~~g~~lI~DEv~~g~g~~-----g~---~~~~~~~~~~pdi~t~--sK~l~~G~~ig~~~~~~~-~~~~~-  265 (389)
T PRK01278        198 LKGLRQLCDENGLLLIFDEVQCGMGRT-----GK---LFAHEWAGVTPDIMAV--AKGIGGGFPLGACLATEE-AAKGM-  265 (389)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCCcC-----Cc---ceeecccCCCCCEEEE--ehhccCCcceEEEEEcHH-HHhcc-
Confidence            999999999999999999999976331     21   11111112  365554  587544456888666543 33221 


Q ss_pred             cccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        369 FVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       369 ~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                        .....+.++     .+  +....+++.++++.+..+++.++++++.+.+++.++.+
T Consensus       266 --~~~~~~~t~-----~~--~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l  314 (389)
T PRK01278        266 --TPGTHGSTY-----GG--NPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGL  314 (389)
T ss_pred             --CCCCCCCCC-----Cc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence              111112221     12  22333567777888767778888888877777776654

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.76  E-value=6.5e-17  Score=160.14  Aligned_cols=205  Identities=15%  Similarity=0.093  Sum_probs=139.8

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      ..+..+.|..+ .++.+.+.+.+...         ...|....|.+++++++++++..+....                 
T Consensus        24 i~l~~~~p~~~-~~~~~~~~~~~~~~---------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~-----------------   76 (357)
T TIGR03539        24 VDLSVGTPVDP-VPPLIRAALAAAAD---------APGYPQTWGTPELREAIVDWLERRRGVP-----------------   76 (357)
T ss_pred             EEccCCCCCCC-CCHHHHHHHHHHHh---------hCCCCcccCCHHHHHHHHHHHHHhcCCC-----------------
Confidence            34455556543 34455555554322         1234456688999999999887643221                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                              |.++ +++++|+|+++++.+++.++ .++++.        |++++|+|+.+...++..|++++.++      
T Consensus        77 --------~~~~-~~I~it~G~~~~i~~~~~~l~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~v~------  133 (357)
T TIGR03539        77 --------GLDP-TAVLPVIGTKELVAWLPTLLGLGPGDT--------VVIPELAYPTYEVGALLAGATPVAAD------  133 (357)
T ss_pred             --------CCCc-CeEEEccChHHHHHHHHHHHcCCCCCE--------EEECCCCcHHHHHHHHhcCCEEeccC------
Confidence                    0233 38999999999999988877 566666        99999999999999999999887764      


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC----
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS----  332 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~----  332 (435)
                       |++.+.   .+++++|++++|+||||.+   +++++|.++|++||+++|+|++|+.+...     +.....++..    
T Consensus       134 -~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~  204 (357)
T TIGR03539       134 -DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWE-----GRPVSILDPRVCGG  204 (357)
T ss_pred             -ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccC-----CCCccceecccCCC
Confidence             222222   2578999999999999998   46888999999999999999999876531     1111111111    


Q ss_pred             CCCccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210        333 LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~  365 (435)
                      ...-.++..|++|.. .+...+|+++ .++++.+
T Consensus       205 ~~~~vi~~~S~SK~~~~~G~R~G~~i-~~~~~~~  237 (357)
T TIGR03539       205 DHTGLLAVHSLSKRSNLAGYRAGFVA-GDPALVA  237 (357)
T ss_pred             ccccEEEEeccccccCCCceeEEEEe-cCHHHHH
Confidence            011246677899983 3445578865 5555544

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PLN02509 cystathionine beta-lyase

Probab=99.76  E-value=2.3e-17  Score=166.62  Aligned_cols=158  Identities=18%  Similarity=0.192  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHI  252 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~v  252 (435)
                      ..++.++++++.|.+   ..+++++|+.++.+++ .+.++||.        |+++++.|.++..    .+...|++++.+
T Consensus       135 ~~aLE~~lA~leg~e---~ai~~~SG~aAi~~il-~ll~~GD~--------VI~~~~~y~~t~~ll~~~l~~~G~~v~~v  202 (464)
T PLN02509        135 RDALESLLAKLDKAD---RAFCFTSGMAALSAVT-HLIKNGEE--------IVAGDDVYGGSDRLLSQVVPRSGVVVKRV  202 (464)
T ss_pred             HHHHHHHHHHHhCCC---EEEEeCcHHHHHHHHH-HHhCCCCE--------EEEcCCchhhHHHHHHHHHHHCCeEEEEe
Confidence            455666777777643   4577778888886655 45666666        9999999998763    345679998888


Q ss_pred             ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      +.     .|+++++++++++|++|++++|+||+|.+.|+++|.++|++||+++++|++++....      +   .+.   
T Consensus       203 d~-----~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~------~---~pl---  265 (464)
T PLN02509        203 NT-----TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL------S---RPL---  265 (464)
T ss_pred             CC-----CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc------C---Chh---
Confidence            64     368999999999999999999999999999999999999999999999999865432      1   122   


Q ss_pred             CCCccEEEecCCCCCCccCC--cEEEEEeCCcc
Q psy10210        333 LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKY  363 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~  363 (435)
                      ..|+|+++.|.+||+.|+.+  .|+++++++.+
T Consensus       266 ~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l  298 (464)
T PLN02509        266 ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKL  298 (464)
T ss_pred             hcCCcEEEecCcccccCCCccceeEEEeccHHH
Confidence            34789999999999877665  56666666554

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.76  E-value=1.2e-17  Score=167.46  Aligned_cols=159  Identities=22%  Similarity=0.242  Sum_probs=124.8

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~  254 (435)
                      ++++.++++.|++.   .+++++|+.|+.+++.++..+++.        |+++.+.|..    +...+...|++++.+++
T Consensus        69 ~le~~lA~l~g~~~---~i~~~sG~~Al~~~l~~ll~~Gd~--------Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  137 (403)
T PRK07503         69 LLEQRMASLEGGEA---AVALASGMGAITATLWTLLRPGDE--------VIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL  137 (403)
T ss_pred             HHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHcCCCCE--------EEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence            34457788888753   477778899999999988777776        9999998865    33456678999998876


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +     |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+..         ..++.   .
T Consensus       138 ~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~---------~~~l~---~  200 (403)
T PRK07503        138 T-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL---------QRPLE---L  200 (403)
T ss_pred             C-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCchh---h
Confidence            3     78999999999999999999999999999999999999999999999999975422         12332   4


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      ++|+++.|++|++.++.+  .|+++ .++++.+.
T Consensus       201 g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~  233 (403)
T PRK07503        201 GADLVVHSATKYLGGHGDITAGLVV-GGKALADR  233 (403)
T ss_pred             CCCEEEccccccccCCCceeEEEEE-cCHHHHHH
Confidence            789999999999655432  56644 66665443

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=7.7e-17  Score=158.09  Aligned_cols=201  Identities=14%  Similarity=0.087  Sum_probs=142.1

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|.. .+|..+++.+.+.+..+       ..++++..|.+++++++++++....                    
T Consensus        22 i~l~~~~~~~-~~p~~~~~~~~~~~~~~-------~~~~Y~~~~~~~Lr~aia~~~~~~~--------------------   73 (335)
T PRK14808         22 TYLALNENPF-PFPEDLVDEVFRRLNSD-------TLRIYYDSPDEELIEKILSYLDTDF--------------------   73 (335)
T ss_pred             eEecCCCCCC-CCCHHHHHHHHHHhhhh-------hhhcCCCCChHHHHHHHHHHhCCCC--------------------
Confidence            4455555665 34456777777655432       1121122368899999998886531                    


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV  260 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~  260 (435)
                               .++ +++++|+|+++++.+++.++    +.        |++++|+|+.+..+++..|++++.+|+++++.+
T Consensus        74 ---------~~~-~~i~it~Ga~~~i~~~~~~~----d~--------v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  131 (335)
T PRK14808         74 ---------LSK-NNVSVGNGADEIIYVMMLMF----DR--------SVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI  131 (335)
T ss_pred             ---------CCc-ceEEEcCCHHHHHHHHHHHh----Cc--------EEECCCCHHHHHHHHHHcCCeEEEecCCCcCCC
Confidence                     123 38999999999999999876    44        999999999999999999999999999877765


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      +...    + ++++++++++||||||.+-+.+++.+++ ++++++++||+|..|.-    . .. .+...  ...-.+++
T Consensus       132 ~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~----~-~~-~~~~~--~~~~vi~~  197 (335)
T PRK14808        132 PEVN----V-GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG----E-SY-VDLLK--KYENLAVI  197 (335)
T ss_pred             ChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC----C-ch-HHHHH--hCCCEEEE
Confidence            5432    2 3578999999999999998888998888 58999999999987631    0 00 00111  11135666


Q ss_pred             ecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        341 VDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       341 ~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      .|+.|... +...+|+++. ++++.+.
T Consensus       198 ~S~SK~~~l~GlRvG~~v~-~~~~~~~  223 (335)
T PRK14808        198 RTFSKAFSLAAQRIGYVVS-SEKFIDA  223 (335)
T ss_pred             EechhhccCcccceEEEEe-CHHHHHH
Confidence            78999844 3467899665 4455443

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.76  E-value=1.4e-17  Score=166.57  Aligned_cols=158  Identities=17%  Similarity=0.146  Sum_probs=123.5

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+..   .++++|+.++..++.+..++++.        |+++++.|.++...    +...|++++.++ 
T Consensus        69 ~Le~~lA~l~G~~~~---~~~~sG~~Ai~~~l~~~l~~Gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-  136 (398)
T PRK07504         69 MFEKRMCALEGAEDA---RATASGMAAVTAAILCQVKAGDH--------VVAARALFGSCRYVVETLLPRYGIESTLVD-  136 (398)
T ss_pred             HHHHHHHHHhCCCee---eEecCHHHHHHHHHHHHhCCCCE--------EEEcCCchhHHHHHHHHHHhhcCeEEEEEC-
Confidence            445677788887643   56788899999888887777766        99999999975433    445688888885 


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                          ..|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+...         .+.   ..
T Consensus       137 ----~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~---------~~~---~~  200 (398)
T PRK07504        137 ----GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ---------KPL---EL  200 (398)
T ss_pred             ----CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC---------Cch---hh
Confidence                26899999999999999999999999999999999999999999999999999754321         122   33


Q ss_pred             CccEEEecCCCCCCccC-CcEEEEEeCCccc
Q psy10210        335 GVTSISVDTHKYGFTPK-GSSVVLYRDLKYK  364 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~  364 (435)
                      |+|+++.|+||++.++. ..|.+++.+++..
T Consensus       201 gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i  231 (398)
T PRK07504        201 GAHIVVYSATKHIDGQGRCLGGVVLSDKAWI  231 (398)
T ss_pred             CCCEEEeeccccccCCccceEEEEEeCcHHH
Confidence            78999999999965542 3554455555543

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.76  E-value=1.9e-17  Score=164.60  Aligned_cols=160  Identities=18%  Similarity=0.199  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp  253 (435)
                      .++++.++++.|.+.   .+++++|+.++..++ ++..+++.        |+++++.|.+..    ..+...|++++.++
T Consensus        53 ~~Le~~lA~l~g~~~---~~~~~sG~aai~~~~-~~l~~Gd~--------Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~  120 (377)
T PRK07671         53 AALEELIAVLEGGHA---GFAFGSGMAAITAVM-MLFSSGDH--------VILTDDVYGGTYRVMTKVLNRFGIEHTFVD  120 (377)
T ss_pred             HHHHHHHHHHhCCCc---eEEeCCHHHHHHHHH-HHhCCCCE--------EEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence            445567788887643   355666788887665 45556665        999999998533    23455799998887


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      .     .|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+....         ..++   .
T Consensus       121 ~-----~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~---------~~p~---~  183 (377)
T PRK07671        121 T-----SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW---------QSPI---S  183 (377)
T ss_pred             C-----CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc---------CChh---h
Confidence            4     389999999999999999999999999999999999999999999999999864322         1133   3


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      .|+|+++.|.+|++.||.+  .|+++++++++.+.
T Consensus       184 ~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~  218 (377)
T PRK07671        184 LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAED  218 (377)
T ss_pred             hCCeEEEecCcccccCCccceeEEEEeCcHHHHHH
Confidence            4789999999999777754  46667767665443

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.76  E-value=1.8e-17  Score=162.25  Aligned_cols=159  Identities=16%  Similarity=0.055  Sum_probs=118.3

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.+++++|.+++ ++++|+|+++++..+..++ .++ .        |++++|+|..+...++..|++++.+|      
T Consensus        52 lr~~la~~~~~~~~-~i~~t~G~~~~i~~~~~~l-~~g-~--------vl~~~p~y~~~~~~~~~~g~~~~~~~------  114 (330)
T TIGR01140        52 LRAAAAAYYGLPAA-SVLPVNGAQEAIYLLPRLL-APG-R--------VLVLAPTYSEYARAWRAAGHEVVELP------  114 (330)
T ss_pred             HHHHHHHHhCCChh-hEEECCCHHHHHHHHHHHh-CCC-e--------EEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence            34444444554443 8999999999999976653 333 3        99999999999999999999998887      


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCC
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPG  335 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~g  335 (435)
                       |++++++.+ ++++++++++|+||||.+-+   +++|+++|+++|+++|+|++|.++...      .  ...+. ...+
T Consensus       115 -d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~------~--~~~~~~~~~~  184 (330)
T TIGR01140       115 -DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD------A--SLAPQAARFP  184 (330)
T ss_pred             -CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc------c--chhhHhccCC
Confidence             788899888 46789999999999999954   788889999999999999999877531      0  01111 1124


Q ss_pred             ccEEEecCCCCCCcc-CCcEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~  366 (435)
                      -+++..|++|+.+.| .++|+++.+ +++.+.
T Consensus       185 ~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~~~  215 (330)
T TIGR01140       185 GLVVLRSLTKFFGLAGLRLGFVVAH-PALLAR  215 (330)
T ss_pred             CEEEEEecchhhcCchhhhhheeCC-HHHHHH
Confidence            568888999984323 557996654 445443

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.76  E-value=1.5e-16  Score=160.14  Aligned_cols=248  Identities=17%  Similarity=0.105  Sum_probs=163.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.....+.  ..    .+...++.+.++++++.   +.++++++|++|+..|+++++..+..++|.
T Consensus        58 ~~~~i~~a~~~~~~~~~~~~~~--~~----~~~~~~l~~~l~~~~~~---~~~~~~~SGs~A~e~al~~a~~~~~~~~g~  128 (401)
T PRK00854         58 CHPKILAAMVEQAGRLTLTSRA--FR----NDQLAPLYEELAALTGS---HKVLPMNSGAEAVETAIKAVRKWGYEVKGV  128 (401)
T ss_pred             CCHHHHHHHHHHHhhccccccc--cC----CHHHHHHHHHHHhhCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence            4899999999998875433221  11    23445566677777764   278999999999999999998765332343


Q ss_pred             C--CCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210        224 S--LPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       224 ~--~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~  288 (435)
                      +  +++|++.+..|++....+...+.             .+..+|.     .|++++++++.+++++|++++++||+|.+
T Consensus       129 ~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~aii~e~~~~~~G~~  203 (401)
T PRK00854        129 PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPNTVAFLVEPIQGEAGVI  203 (401)
T ss_pred             CCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCeEEEEEccccCCCCCc
Confidence            3  35788888777775433332221             2233331     47899999999899999999999999998


Q ss_pred             cC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCcc-CCcEEEEEeCC
Q psy10210        289 DD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTP-KGSSVVLYRDL  361 (435)
Q Consensus       289 ~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p-~g~g~il~~~~  361 (435)
                      .+    +++|.++|++||+++|+||+|+++...     |.   .+.....  ..|.++++  |++.+. ..+|+++.++ 
T Consensus       204 ~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~-----g~---~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~-  272 (401)
T PRK00854        204 IPPAGYFTRVRELCTANNVTLILDEIQTGLGRT-----GK---LLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNS-  272 (401)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC-----ch---HhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcH-
Confidence            54    999999999999999999999865321     10   1111111  24777765  875544 3567766554 


Q ss_pred             ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        362 KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       362 ~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ++.+..   .....+.++     .+  +....+++.++|+.+..++..++.+++.+.+.+.++.+
T Consensus       273 ~~~~~l---~~~~~~~t~-----~~--~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~  327 (401)
T PRK00854        273 EVLGVL---KPGQHGSTF-----GG--NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSI  327 (401)
T ss_pred             HHHhcc---cCCCCCCCC-----Cc--CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence            443321   111222222     12  22334567777777766667888888888888877765

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.75  E-value=8e-17  Score=159.66  Aligned_cols=157  Identities=21%  Similarity=0.182  Sum_probs=116.7

Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc-----ccHHHH
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT-----VDLAAL  265 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~-----~d~~~l  265 (435)
                      +++ ++++|+|+++++.+++.++. +++.        |++++|+|+.+...++..|++++.+|++.++.     .+++++
T Consensus        73 ~~~-~I~it~G~~~~i~~~~~~l~-~g~~--------vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~  142 (360)
T PRK07392         73 PPE-WILPGNGAAELLTWAGRELA-QLRA--------VYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTL  142 (360)
T ss_pred             Chh-hEEECCCHHHHHHHHHHHhC-CCCe--------EEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHH
Confidence            443 89999999999999998864 4555        99999999999999999999999999974332     466666


Q ss_pred             HHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCCCCccEEEecCC
Q psy10210        266 QSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGVTSISVDTH  344 (435)
Q Consensus       266 ~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gvd~~~~s~h  344 (435)
                      ++.. ++++++++++||||||.+-+.++|.++++++++ +++||+|..|...     +....... .....-.++..|+.
T Consensus       143 ~~~~-~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~-----~~~~s~~~~~~~~~~vi~i~S~S  215 (360)
T PRK07392        143 PPQL-TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPP-----DAEQSLIPCLAEYPNLIILRSLT  215 (360)
T ss_pred             HHhc-cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccC-----ccccchHHHhhcCCCEEEEEech
Confidence            6553 468999999999999999889999999999985 6779999988642     10000111 11112245667899


Q ss_pred             CCCC-ccCCcEEEEEeCCcccc
Q psy10210        345 KYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       345 K~~~-~p~g~g~il~~~~~~~~  365 (435)
                      |... +...+|+++.. +++.+
T Consensus       216 K~~~l~GlRiG~~v~~-~~~~~  236 (360)
T PRK07392        216 KFYSLPGLRLGYAIAH-PDRLQ  236 (360)
T ss_pred             hhhcCCchheeeeeCC-HHHHH
Confidence            9854 55778996654 44443

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.75  E-value=1e-16  Score=161.76  Aligned_cols=256  Identities=14%  Similarity=0.017  Sum_probs=155.6

Q ss_pred             ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210        141 VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE  220 (435)
Q Consensus       141 ~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~  220 (435)
                      ....+|++++++.+.+.++...... .....+......++++.+++++|.+  +.++++ +|++|+..++.++....   
T Consensus        58 ~l~~~p~v~~a~~~~~~~~~~~~~~-s~~~~~~~~~~~~Le~~la~~~g~~--~~i~~~-sG~~a~~~~i~~l~~~~---  130 (410)
T PRK13392         58 GMGQHPDVIGAMVDALDRYGAGAGG-TRNISGTSHPHVLLERELADLHGKE--SALLFT-SGYVSNDAALSTLGKLL---  130 (410)
T ss_pred             CCCCCHHHHHHHHHHHHHcCCCCch-hhhcccChHHHHHHHHHHHHHhCCC--CEEEEC-cHHHHHHHHHHHHhcCC---
Confidence            3334789999999988775322111 1111223334557888999999853  245555 55788888888664310   


Q ss_pred             cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAK  296 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~  296 (435)
                         +++.|+++...|.++...++..|+++..++.+     |.+++++.+.    +++++|++++|+||+|.+.++++|.+
T Consensus       131 ---~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~  202 (410)
T PRK13392        131 ---PGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICD  202 (410)
T ss_pred             ---CCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHH
Confidence               12347777778999888888899988777632     3444444443    57899999999999999999999999


Q ss_pred             HHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210        297 LGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG  376 (435)
Q Consensus       297 la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g  376 (435)
                      +|++||+++++|++|+.+.+.   ..|.+.....-....+|+++.+++|.. +..| |++ +.++++.+........|..
T Consensus       203 l~~~~~~~livDea~~~g~~g---~~g~g~~~~~~~~~~~div~~tlsK~~-g~~G-G~~-~~~~~~~~~l~~~~~~~~~  276 (410)
T PRK13392        203 LADRYNALTYVDEVHAVGLYG---ARGGGIAERDGLMDRIDMIQGTLAKAF-GCLG-GYI-AASADLIDFVRSFAPGFIF  276 (410)
T ss_pred             HHHHcCCEEEEECCccccCcC---CCCCchhhhccCCCCCcEEEEEChHhh-hccc-chh-hcCHHHHHHHHHhCcchhc
Confidence            999999999999999844321   112111111111234688888999984 4444 664 4455554432222232221


Q ss_pred             CCCCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHh
Q psy10210        377 GNYGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       377 g~~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~  425 (435)
                              ..+.+....+++.++++.+... ...++.++..+.+.+.+++
T Consensus       277 --------s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~  318 (410)
T PRK13392        277 --------TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA  318 (410)
T ss_pred             --------cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence                    1112223334555666654322 2234444555555555554

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.75  E-value=1.2e-16  Score=158.39  Aligned_cols=249  Identities=19%  Similarity=0.219  Sum_probs=151.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCCCC
Q psy10210        147 DLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGISL  225 (435)
Q Consensus       147 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~  225 (435)
                      +..+++.+.+.....++     ..+.+.++|.    .+++++|..   .++.+++||.|+.+++.++. .+++       
T Consensus         6 e~~~~v~~~l~s~~~~~-----~g~~~~~fE~----~~a~~~g~~---~~~~~~sgt~Al~~al~~l~~~~gd-------   66 (363)
T PF01041_consen    6 EEIDAVLEVLRSGWLST-----YGPYVEEFEK----EFAEYFGVK---YAVAVSSGTSALHLALRALGLGPGD-------   66 (363)
T ss_dssp             HHHHHHHHHHHHTCCSS-----SSHHHHHHHH----HHHHHHTSS---EEEEESSHHHHHHHHHHHTTGGTTS-------
T ss_pred             HHHHHHHHHHHhCCccC-----CCHHHHHHHH----HHHHHhCCC---eEEEeCChhHHHHHHHHhcCCCcCc-------
Confidence            44556666666532221     1445555555    556667643   67999999999999999963 3344       


Q ss_pred             CeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCc
Q psy10210        226 PEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP  304 (435)
Q Consensus       226 ~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~  304 (435)
                       +|++|..++++...++...|++++.++++ +++.+|+++++++++++|++|++++.   .|...++++|.++|+++|++
T Consensus        67 -eVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~  142 (363)
T PF01041_consen   67 -EVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIP  142 (363)
T ss_dssp             -EEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-E
T ss_pred             -eEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCc
Confidence             59999999999999999999999999999 89999999999999999999998876   78888999999999999999


Q ss_pred             EEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC-CCCC---CCCC
Q psy10210        305 VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS-DWPG---GNYG  380 (435)
Q Consensus       305 livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~-~~~g---g~~~  380 (435)
                      ||+|+|++-+...-.+..|    .+    ..+-++++...|.+.++.| |+++++++++.++...... .+..   ..|.
T Consensus       143 lIeD~a~a~g~~~~g~~~G----~~----gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~  213 (363)
T PF01041_consen  143 LIEDAAQAFGARYKGRPVG----SF----GDIAIFSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGRSRDAFRRYR  213 (363)
T ss_dssp             EEEE-TTTTT-EETTEETT----SS----SSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTE
T ss_pred             EEEccccccCceeCCEecc----CC----CCceEecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCcCcccccccc
Confidence            9999999865432111111    11    1133444445688644444 8888888776544221111 1000   0000


Q ss_pred             C---CccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        381 S---PSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       381 ~---~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      .   +... .|.. .+.++.+..+.-..+...++-+++.+.+.+.++.++.+
T Consensus       214 ~~~~~g~n-~rm~-~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~  263 (363)
T PF01041_consen  214 HELPPGYN-FRMS-ELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGI  263 (363)
T ss_dssp             ESSSS--B--B-B-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTE
T ss_pred             ccccCCcc-cccH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCc
Confidence            0   0111 1222 22233333333334555666666666677777666654

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK05968 hypothetical protein; Provisional

Probab=99.75  E-value=3.5e-17  Score=163.45  Aligned_cols=159  Identities=16%  Similarity=0.151  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp  253 (435)
                      .++++.+++++|.+.   .+++++|+.|+.+++.++..++++        |+++.+.|.+.    ...+...|++++.++
T Consensus        66 ~~le~~lA~l~g~~~---av~~~sG~~Ai~~al~al~~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd  134 (389)
T PRK05968         66 RAFEEMLAKLEGAED---ARGFASGMAAISSTVLSFVEPGDR--------IVAVRHVYPDAFRLFETILKRMGVEVDYVD  134 (389)
T ss_pred             HHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCE--------EEEeCCCchHHHHHHHHHHHHcCceEEEeC
Confidence            344567788888753   355677789999999888777776        99999998873    356677899999887


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      .+     |++++++++ ++|++|++++|+|+++.+.++++|.++|++||+++++|++|+.+...         .+.   .
T Consensus       135 ~~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~---------~p~---~  196 (389)
T PRK05968        135 GR-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ---------RPI---T  196 (389)
T ss_pred             CC-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc---------Cch---h
Confidence            43     789999988 67899999999999999999999999999999999999998765321         122   2


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      .|+|+++.|++|++.+|.+  .|+ ++.++++.+.
T Consensus       197 ~g~Divv~S~tK~l~g~~~~~gG~-i~~~~~~~~~  230 (389)
T PRK05968        197 LGVDLVIHSASKYLGGHSDTVAGV-VAGSKEHIAR  230 (389)
T ss_pred             cCCcEEEeeccccccCCCCeEEEE-EEECHHHHHH
Confidence            4789999999999777654  465 5566665443

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.75  E-value=2.3e-17  Score=165.25  Aligned_cols=155  Identities=17%  Similarity=0.188  Sum_probs=121.9

Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCCC
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~~  257 (435)
                      +.+++++|.+   ..++++||++|+..++.++.++++.        |+++.+.|.+..    ..++..|++++.++.+  
T Consensus        71 ~~iA~~~g~~---~~l~~~sG~~Ai~~al~~ll~~Gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--  137 (400)
T PRK06234         71 NKLALLEGGE---AAVVAASGMGAISSSLWSALKAGDH--------VVASDTLYGCTFALLNHGLTRYGVEVTFVDTS--  137 (400)
T ss_pred             HHHHHHhCCC---cEEEEcCHHHHHHHHHHHHhCCCCE--------EEEecCccchHHHHHHHHHhhCCeEEEEECCC--
Confidence            3555556543   5688999999999999988877776        999999887743    4456789999998753  


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                         |+++++++++++|++|++++|+||+|.+.++++|.++|+++  |+++++|++|+.+..      +   .++   ..+
T Consensus       138 ---d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~------~---~~l---~~g  202 (400)
T PRK06234        138 ---NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI------Q---RPL---QLG  202 (400)
T ss_pred             ---CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc------C---Cch---hhC
Confidence               79999999999999999999999999999999999999997  999999999976533      1   123   237


Q ss_pred             ccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      +|+++.|++|++.++..  .|+++.+ +++.+
T Consensus       203 ~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~  233 (400)
T PRK06234        203 ADVVVHSATKYLNGHGDVIAGFVVGK-EEFIN  233 (400)
T ss_pred             CcEEEeeccccccCCCCceeEEEEec-HHHHH
Confidence            89999999999654432  4775544 45443

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.75  E-value=1.5e-16  Score=160.09  Aligned_cols=253  Identities=13%  Similarity=0.024  Sum_probs=160.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+++.++....... ....+......++.+.+++++|.+   ..+++++|++|+..++.++....      
T Consensus        60 ~~p~v~~a~~~~~~~~~~~~~~s-~~~~g~~~~~~~Le~~la~~~g~~---~~l~~~sG~~an~~ai~~l~~~~------  129 (402)
T TIGR01821        60 QHPEVLQAMHETLDKYGAGAGGT-RNISGTNIPHVELEAELADLHGKE---SALVFTSGYVANDATLATLAKII------  129 (402)
T ss_pred             CCHHHHHHHHHHHHHcCCCCcch-hhhhCCcHHHHHHHHHHHHHhCCC---eEEEECchHHHHHHHHHHhhCCC------
Confidence            48999999999998754332211 111123445567888889999853   35666777999999998876421      


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                      ++..|+.....|.+....+...|+++..++.     .|++++++.++    +++++|++++++||+|.+.++++|.++|+
T Consensus       130 ~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~  204 (402)
T TIGR01821       130 PGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLAD  204 (402)
T ss_pred             CCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHH
Confidence            1123555556888888888888888766653     36677777765    26789999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      +||+++++|++|+.+++   ...|.+... .+. ...+|++..++.|.+ +..| |+++ .++++.+........+.   
T Consensus       205 ~~~~~livDea~~~G~~---g~~g~g~~~~~~~-~~~~div~~t~sKa~-g~~G-G~i~-~~~~~~~~l~~~~~~~~---  274 (402)
T TIGR01821       205 KYGALTYLDEVHAVGLY---GPRGGGIAERDGL-MHRIDIIEGTLAKAF-GVVG-GYIA-ASRKLIDAIRSYAPGFI---  274 (402)
T ss_pred             HcCCEEEEeCccccccc---CCCCCccchhccC-CCCCeEEEEechhhh-ccCC-ceee-cCHHHHHHHHHhCcCce---
Confidence            99999999999984433   111221111 111 124688888999984 5444 6644 44454433211112111   


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhc
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l  426 (435)
                           ..++.+....+++.++++.+... ...++.++..+.+.+.++++
T Consensus       275 -----~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~  318 (402)
T TIGR01821       275 -----FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL  318 (402)
T ss_pred             -----ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                 11223333445666777765433 34445556666666666654

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.75  E-value=5.2e-17  Score=161.13  Aligned_cols=172  Identities=13%  Similarity=0.148  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                      .++++.+++++|.+++ ++++|+|+++++.+++.++..++ +.        |++++|+|..+...++..|++++.+|++ 
T Consensus        62 ~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~~~~g~~~--------vlv~~p~y~~~~~~~~~~g~~~~~v~~~~  132 (364)
T PRK04781         62 PGLRSALAALYGCAPE-QLLIGRGSDEAIDLLVRALCVPGRDA--------VLVTPPVFGMYAVCARLQNAPLVEVPLVD  132 (364)
T ss_pred             HHHHHHHHHHhCcChH-HEEEeCCHHHHHHHHHHHhcCCCCCe--------EEEcCCChHHHHHHHHHcCCEEEEEecCC
Confidence            3455566666666654 89999999999999999987766 44        9999999999999999999999999984 


Q ss_pred             --CCccccHHHHHHH-hhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        256 --SSYTVDLAALQSA-ITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       256 --~~~~~d~~~l~~~-i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                        +++.+|++++.+. .++++++|++++||||||.+-+.+++.++++.  +++++|+|++|..|...   . . .....+
T Consensus       133 ~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~---~-~-~~~~~~  207 (364)
T PRK04781        133 GADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDV---P-S-AVGLLA  207 (364)
T ss_pred             CccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCC---c-c-hHHHHh
Confidence              2346789888654 46789999999999999999777777666654  47999999999987531   0 0 000111


Q ss_pred             CCCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        331 FSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                        ...-.++..|+.|..+ +...+|+++ .++++.+.
T Consensus       208 --~~~~vi~~~SfSK~~gl~GlRvGy~v-~~~~l~~~  241 (364)
T PRK04781        208 --RYDNLAVLRTLSKAHALAAARIGSLI-ANAELIAV  241 (364)
T ss_pred             --hCCCEEEEecChhhcccccceeeeee-CCHHHHHH
Confidence              1122466778999743 457789955 55565544

>PRK06460 hypothetical protein; Provisional

Probab=99.75  E-value=4.1e-17  Score=162.22  Aligned_cols=159  Identities=14%  Similarity=0.098  Sum_probs=118.4

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCc----hhHHHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAH----PAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~----~~~~~~~~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+.  + +++++|++++..++.++.++++.        |+++.+.|    ..+...++..|++++.++.
T Consensus        49 ~L~~~lA~l~g~~~--~-v~~~sG~~ai~~~l~al~~~Gd~--------Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~  117 (376)
T PRK06460         49 ELTKKIVELENAEM--G-VAFSSGMGAISTTALALLKPGNS--------VLVHRDMFGRSYRFFTDYLKNWGVNVDASNP  117 (376)
T ss_pred             HHHHHHHHHhCCCc--E-EEeCCHHHHHHHHHHHHhCCCCE--------EEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence            45567778887753  3 44466689999999998877776        99987654    4466778888999988876


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      ++     .+.+++.+++++++|++++|+||+|.+.++++|.++|+++|+++++|++|+.+..         ..+.   ..
T Consensus       118 ~~-----~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~---------~~~l---~~  180 (376)
T PRK06460        118 GS-----DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN---------QKPL---EL  180 (376)
T ss_pred             CC-----HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc---------CChh---hc
Confidence            42     2345555667899999999999999999999999999999999999999875321         0122   23


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      ++|+++.|++|+..|+.+  .|+ ++.++++.+.
T Consensus       181 ~~divv~S~sK~l~G~~~~~~G~-~~~~~~l~~~  213 (376)
T PRK06460        181 GADIVVHSASKFLAGHNDVIAGL-AAGYGKLLNV  213 (376)
T ss_pred             CCCEEEeecceeccCCCCceEEE-EecCHHHHHH
Confidence            689999999999544332  566 5566665543

>PRK08354 putative aminotransferase; Provisional

Probab=99.75  E-value=1.3e-16  Score=155.01  Aligned_cols=148  Identities=14%  Similarity=0.123  Sum_probs=115.2

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.+++.+|    +++++|+|+++++.+++..+. +++.        |++++|+|+.+...++..|++++.++      
T Consensus        45 l~~~ia~~~~----~~I~vt~G~~~al~~~~~~~~-~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~~~------  105 (311)
T PRK08354         45 LEEEFSKLFG----EPIVITAGITEALYLIGILAL-RDRK--------VIIPRHTYGEYERVARFFAARIIKGP------  105 (311)
T ss_pred             HHHHHHHHHC----CCEEECCCHHHHHHHHHHhhC-CCCe--------EEEeCCCcHHHHHHHHHcCCEEeecC------
Confidence            4456666665    279999999999998875443 5555        99999999999999999999997764      


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      +|++.+++++. +++++++++||||||.+   +.+++|.++|+++|+++|+||+|.+|...     +.   ..+   ..-
T Consensus       106 ~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~-----~~---~~~---~~~  173 (311)
T PRK08354        106 NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKK-----PE---SPE---GEN  173 (311)
T ss_pred             CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccc-----cc---ccC---CCc
Confidence            57888888876 56789999999999998   56888889999999999999999988652     10   111   223


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEE
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLY  358 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~  358 (435)
                      .+++.|+.|... +...+|+++.
T Consensus       174 vi~~~S~SK~~~l~GlRiG~~v~  196 (311)
T PRK08354        174 IIKLRTFTKSYGLPGIRVGYVKG  196 (311)
T ss_pred             EEEEeccHhhcCCccceeeeeee
Confidence            566678899843 4466898765

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.75  E-value=2.7e-17  Score=164.68  Aligned_cols=154  Identities=15%  Similarity=0.123  Sum_probs=121.7

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~  254 (435)
                      ++.+.++++.|.+   ..+++++|+.|+..++.++..+++.        |+++...|.+    +...++..|++++.++.
T Consensus        74 ~le~~lA~l~g~~---~al~~~sG~~Ai~~~l~all~~Gd~--------Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~  142 (403)
T PRK07810         74 MFEERLRLIEGAE---ACFATASGMSAVFTALGALLGAGDR--------LVAARSLFGSCFVVCNEILPRWGVETVFVDG  142 (403)
T ss_pred             HHHHHHHHHhCCC---cEEEECChHHHHHHHHHHHhCCCCE--------EEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence            4455677888764   5688899999999999988877776        9988865533    45667778999999874


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+....         ..+.   ..
T Consensus       143 -----~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~---------~~~~---~~  205 (403)
T PRK07810        143 -----EDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLL---------QRGL---PL  205 (403)
T ss_pred             -----CCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcccc---------CChh---hc
Confidence                 389999999999999999999999999999999999999999999999999874432         1122   34


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeC
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRD  360 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~  360 (435)
                      |+|+++.|.+|++.+...  .|+++.++
T Consensus       206 gaDivv~S~tK~l~g~g~~~gG~v~~~~  233 (403)
T PRK07810        206 GADVVVYSGTKHIDGQGRVLGGAILGDR  233 (403)
T ss_pred             CCcEEEccCCceecCCcCceeEEEEeCh
Confidence            789999999999544321  36655443

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.75  E-value=1.6e-16  Score=159.86  Aligned_cols=210  Identities=13%  Similarity=0.087  Sum_probs=143.8

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ...+..+.|..+ .+..+.+.+.+.+......  .....|.+..|.+++++++++.+....                   
T Consensus        35 ~i~l~~~~~~~~-~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~~~-------------------   92 (402)
T TIGR03542        35 IIRLGIGDTTQP-LPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYRGR-------------------   92 (402)
T ss_pred             eEEcCCCCCCCC-CCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHhcC-------------------
Confidence            345555666653 3556777777766532110  112345566789999999998753310                   


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC-----------E
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM-----------K  248 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~-----------~  248 (435)
                                .++ +++++|+|+++++.+++ .+..+++.        |++++|+|..+...++..|+           +
T Consensus        93 ----------~~~-d~I~it~Ga~~al~~l~-~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~  152 (402)
T TIGR03542        93 ----------IDP-EEIFISDGAKCDVFRLQ-SLFGSDNT--------VAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSK  152 (402)
T ss_pred             ----------CCH-HHEEECCCcHHHHHHHH-HhcCCCCE--------EEEeCCCCcchHHHHHHcCCccccccccccce
Confidence                      123 38999999999999864 44455555        99999999999999999999           9


Q ss_pred             EEEEecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        249 VKHIRLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       249 v~~vp~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      ++.+|+++  ++..|++.     .+++++|++++||||||.+   +.+++|.++|++||+++|+|++|..|...  .  .
T Consensus       153 ~~~v~~~~~~~~~~~~~~-----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~--~--~  223 (402)
T TIGR03542       153 ITYLPCTKENNFIPDLPE-----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD--P--S  223 (402)
T ss_pred             EEEeecchhhCCCCCccc-----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC--C--C
Confidence            99999863  34444321     1578999999999999999   56899999999999999999999987541  0  0


Q ss_pred             CCCCCCCCCC-CCccEEEecCCCCC-CccCCcEEEEEeC
Q psy10210        324 YPLPPFDFSL-PGVTSISVDTHKYG-FTPKGSSVVLYRD  360 (435)
Q Consensus       324 ~~~~~~d~~~-~gvd~~~~s~hK~~-~~p~g~g~il~~~  360 (435)
                      .+.+...... .+..+.+.|+.|.. .....+|+++..+
T Consensus       224 ~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~  262 (402)
T TIGR03542       224 LPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPK  262 (402)
T ss_pred             CCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecH
Confidence            0001111111 12345567889974 3446789966644

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.75  E-value=4.1e-17  Score=161.85  Aligned_cols=158  Identities=20%  Similarity=0.227  Sum_probs=122.7

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+.   .++++||++++.+++ ++..+++.        |+++++.|++.    ...++..|++++.++.
T Consensus        56 ~le~~la~l~g~~~---~~~~~sG~~ai~~~~-~ll~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  123 (366)
T PRK08247         56 VLEQAIADLEGGDQ---GFACSSGMAAIQLVM-SLFRSGDE--------LIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT  123 (366)
T ss_pred             HHHHHHHHHhCCCc---EEEEcCHHHHHHHHH-HHhCCCCE--------EEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence            45557788888754   378888899999876 45556665        99999999873    4455668999988875


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.++++|.++|++||+++++|++|+....         ..+.   ..
T Consensus       124 -----~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~---------~~p~---~~  186 (366)
T PRK08247        124 -----ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL---------QRPL---EE  186 (366)
T ss_pred             -----CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc---------cCch---hc
Confidence                 388999999999999999999999999999999999999999999999999854322         1122   24


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      |+|+++.|++|+..++.+  .|+++.+++++.+
T Consensus       187 g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~  219 (366)
T PRK08247        187 GADIVIHSATKYLGGHNDVLAGLVVAKGQELCE  219 (366)
T ss_pred             CCcEEEeecceeccCCCceeeeEEecChHHHHH
Confidence            789999999999765543  4665555455543

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.75  E-value=2.3e-16  Score=156.13  Aligned_cols=252  Identities=18%  Similarity=0.146  Sum_probs=179.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|.+.+++.+++.+....+....     ..+...++.+.+.+++..+....++++++|+||++.|++.++.....    
T Consensus        73 ~hP~Vv~Av~~q~~~~~h~~~~~~-----~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr----  143 (447)
T COG0160          73 NHPRVVEAVKRQLAKLNHTHTRDL-----YYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGR----  143 (447)
T ss_pred             CCHHHHHHHHHHHHHhhcccCCcc-----cchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCC----
Confidence            389999999999988654432211     11556667777888776544457999999999999999999876543    


Q ss_pred             CCCeEEEeCCCchhHHHHHH-HcCC-------------EEEEEecCCCcc------------ccHHHHHHHhhc------
Q psy10210        224 SLPEIVLPTTAHPAFDKAAN-YFGM-------------KVKHIRLTSSYT------------VDLAALQSAITG------  271 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~-~~g~-------------~v~~vp~~~~~~------------~d~~~l~~~i~~------  271 (435)
                        +.||....+|++....+. ..|.             .+.++|....++            -..+.+++.+..      
T Consensus       144 --~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~  221 (447)
T COG0160         144 --PGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPE  221 (447)
T ss_pred             --CcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCC
Confidence              459998888888443332 2221             366676542221            123445554432      


Q ss_pred             CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCC
Q psy10210        272 NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHK  345 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK  345 (435)
                      ++.++++...+...|.+    +.++++.++|++||+++|+||+|.||        |+....|.+...|+  |+++++  |
T Consensus       222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~--------GRTG~~fa~E~~gv~PDivt~a--K  291 (447)
T COG0160         222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGF--------GRTGKMFAFEHFGVEPDIVTLA--K  291 (447)
T ss_pred             ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC--------CccccchhhhhcCCCCCEEEec--c
Confidence            57899999999988888    66999999999999999999999998        44445788888886  888887  8


Q ss_pred             CCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        346 YGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       346 ~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      -+.+..+.|.++.+. ++.+.    .+.-.+++|+..+       .+.+++.|+++.+..+++.++++++.+++++.+++
T Consensus       292 ~ig~G~Pl~avv~r~-ei~~~----~~g~~~~Tf~GNp-------va~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~  359 (447)
T COG0160         292 SLGGGLPLSAVVGRA-EIMDW----PPGGHGGTFGGNP-------VACAAALAVLDVIEEENLLERAAELGEYLRDRLEE  359 (447)
T ss_pred             cccCCCceeEEeccH-Hhccc----CCcccCCCCCcCH-------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence            766677788866664 43321    2222233332222       23478899999999999999999999999988887


Q ss_pred             cCC
Q psy10210        426 LSD  428 (435)
Q Consensus       426 l~~  428 (435)
                      |++
T Consensus       360 l~~  362 (447)
T COG0160         360 LQE  362 (447)
T ss_pred             HHh
Confidence            654

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.75  E-value=3.5e-17  Score=162.74  Aligned_cols=158  Identities=18%  Similarity=0.174  Sum_probs=121.0

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~  254 (435)
                      ++++.++++.|.+.   .+++++|+.|+.+++ ++.++++.        |+++++.|++..    ..+...|++++.++.
T Consensus        54 ~Le~~la~l~g~~~---al~~~SG~~Al~~~l-~~l~pGd~--------Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~  121 (380)
T PRK06176         54 ALEELIADLEGGVK---GFAFASGLAGIHAVF-SLFQSGDH--------VLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT  121 (380)
T ss_pred             HHHHHHHHHhCCCC---EEEECCHHHHHHHHH-HHcCCCCE--------EEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence            34456777777543   366677788998666 45566665        999999988643    445667888888874


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|+++++++++++|++|++++|+||+|.+.|+++|.++|++||+++++|++|+....      +   .+.   ..
T Consensus       122 -----~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~------~---~p~---~~  184 (380)
T PRK06176        122 -----SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY------Q---NPL---LL  184 (380)
T ss_pred             -----CCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc------C---Ccc---cc
Confidence                 379999999999999999999999999999999999999999999999999975422      1   133   34


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      |+|+++.|.+|++.+|..  .|+++.+++++..
T Consensus       185 gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~  217 (380)
T PRK06176        185 GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQ  217 (380)
T ss_pred             CCCEEEecCceeccCCccceeeEEEecHHHHHH
Confidence            899999999999766643  4666666665543

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.74  E-value=1.6e-16  Score=159.64  Aligned_cols=251  Identities=19%  Similarity=0.127  Sum_probs=163.9

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|.+.+++.+.+........      ....+...++.++++++.+.   +++++|+||++|+.+++++++.+++. .+..
T Consensus        57 ~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~~~~gg~eA~~~al~~a~~~~~~-~~~~  126 (396)
T PRK02627         57 HPKLVEAIQEQAAKLIHTSN------LYYIEPQEELAEKLVELSGM---DKVFFCNSGAEANEAAIKLARKYGHK-KGIE  126 (396)
T ss_pred             CHHHHHHHHHHHhhcccccc------ccCCHHHHHHHHHHHhhcCC---CEEEECCCcHHHHHHHHHHHHHHhcc-cCCC
Confidence            58899999988876322111      11245667777888888654   38999999999999999999877654 4445


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCE-EE---EEecCCCc----cccHHHHHHHhhcCceEEEEeCCCCCcccc----cCHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMK-VK---HIRLTSSY----TVDLAALQSAITGNTVMLVGSMPNFPYGTM----DDIG  292 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~-v~---~vp~~~~~----~~d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~i~  292 (435)
                      +++|++.++.|+++...+...+.. ..   ..|...+.    ..|++++++++.+++++|++++++||+|..    +.++
T Consensus       127 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~  206 (396)
T PRK02627        127 KPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQ  206 (396)
T ss_pred             CCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHH
Confidence            578999999988865554443322 11   11221111    128999999998889999999999999943    5699


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV  370 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~  370 (435)
                      +|.++|++||+++|+||+|++|...     |.   .+.+...+  .|++++  .|...++..+|+++.++ ++.+..   
T Consensus       207 ~l~~l~~~~~~~lI~DE~~~g~g~~-----g~---~~~~~~~~~~pdi~t~--sK~~~~G~rig~~~~~~-~~~~~~---  272 (396)
T PRK02627        207 ALRELCDENGILLILDEVQTGMGRT-----GK---LFAYQHYGIEPDIMTL--AKGLGGGVPIGAVLAKE-KVADVF---  272 (396)
T ss_pred             HHHHHHHHcCCEEEEechhcCCCcc-----Cc---eeeehhcCCCCCEEEE--cchhhCCcccEEEEEcH-HHHhcc---
Confidence            9999999999999999999986331     21   11111122  366655  48754446689966654 443321   


Q ss_pred             cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .......     +..+  +....+++.++++.+..+++.+++++..+.+++.+.++
T Consensus       273 ~~~~~~~-----t~~~--~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  321 (396)
T PRK02627        273 TPGDHGS-----TFGG--NPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLREL  321 (396)
T ss_pred             CCCCCCC-----CCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            1111111     1111  22233566677777766777778877777776665543

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.74  E-value=4.7e-17  Score=160.00  Aligned_cols=230  Identities=13%  Similarity=0.027  Sum_probs=156.1

Q ss_pred             cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCC-hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHc
Q psy10210        169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSG-GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYF  245 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~g-gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~  245 (435)
                      ..+.+.++..++++.++++++.+.+.++++++| ||+|++.++.++..++++        +++......+  +.+.++..
T Consensus        31 r~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~--------~l~i~~G~fg~r~~~~a~~~  102 (349)
T TIGR01364        31 RSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKV--------ADYIVTGAWSKKAAKEAKKY  102 (349)
T ss_pred             CchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe--------EEEEECCHHHHHHHHHHHHh
Confidence            356677888899999999999755556777765 999999999998766655        6555555555  67888889


Q ss_pred             CCEEEEEecCCC----ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210        246 GMKVKHIRLTSS----YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA  321 (435)
Q Consensus       246 g~~v~~vp~~~~----~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~  321 (435)
                      |+ +..+..++.    ..+|+++++  +++++++|.+++..|.||+..+     ++++.++++++||++++.+       
T Consensus       103 g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g-------  167 (349)
T TIGR01364       103 GV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNIL-------  167 (349)
T ss_pred             CC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEcccccc-------
Confidence            99 777775422    235666554  3568899999999999999855     6777789999999998543       


Q ss_pred             cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC--CCCCccccCCCchHHHHHHHH
Q psy10210        322 AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN--YGSPSVSGSRSGGIIATCWAA  399 (435)
Q Consensus       322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~--~~~~~~~gsr~~~~ia~~~a~  399 (435)
                          +.++|+..  .|++++|+||+ ++|.|+|+++++++.+.+... ..+.+..-.  ....+..++.+...+.+..++
T Consensus       168 ----~~~id~~~--~d~~~~ssqK~-lgP~Glg~l~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~a  239 (349)
T TIGR01364       168 ----SRPIDVSK--FGLIYAGAQKN-IGPAGLTVVIVRKDLLGRASR-ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLV  239 (349)
T ss_pred             ----CccCCHHH--ccEEEEecccc-cCCCceEEEEECHHHHhhccc-CCCCcchHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence                33677654  56999999998 579999998888765432111 111110000  001122356667777788888


Q ss_pred             HHHhcHH-HHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        400 MMYFGFE-AQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       400 l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      ++.+..+ |+.++.++..+..+.+++.+.++
T Consensus       240 l~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~  270 (349)
T TIGR01364       240 FKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS  270 (349)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            8877555 45555555555544444444433

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PLN02397 aspartate transaminase

Probab=99.74  E-value=6.2e-17  Score=163.60  Aligned_cols=184  Identities=11%  Similarity=0.034  Sum_probs=127.8

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC----CceEEcCChHHHHHHHHH
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE----TCGCMTSGGTESIMMACK  211 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~----~~~~~t~ggteai~~a~~  211 (435)
                      ..+|++..|.+++|+++++++...... +.                         +++    .+++.++| +.++..++.
T Consensus        84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~-~~-------------------------~~~~i~~~~i~~g~G-a~~l~~~~~  136 (423)
T PLN02397         84 NKEYLPIEGLAEFNKLSAKLAYGADSP-AI-------------------------KENRVATVQCLSGTG-SLRLGAEFL  136 (423)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHcCCCCc-hh-------------------------hcCeeEeeecccchH-HHHHHHHHH
Confidence            346778889999999999988543211 00                         111    01222332 233445555


Q ss_pred             HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-C-CCccccHHHHHHHhh---cCceEEEEeCCCCCcc
Q psy10210        212 AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-T-SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYG  286 (435)
Q Consensus       212 a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~-~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG  286 (435)
                      ++.++|+.        |++++|+|+.+...++..|++++.+|+ + +++.+|++.+++.+.   ++++++++++||||||
T Consensus       137 ~~~~pGd~--------Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG  208 (423)
T PLN02397        137 ARFYPGST--------IYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTG  208 (423)
T ss_pred             HHhCCCCE--------EEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCC
Confidence            55456665        999999999999999999999999998 3 457899998888775   5678999999999999


Q ss_pred             cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCC-ccEEEecCCCCCC-ccCCcEEEE
Q psy10210        287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPG-VTSISVDTHKYGF-TPKGSSVVL  357 (435)
Q Consensus       287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~g-vd~~~~s~hK~~~-~p~g~g~il  357 (435)
                      .+   +.+++|+++|++||+++++|++|.++.+.  +. ..+..+ ..+...+ -.+++.|+.|... ....+|+++
T Consensus       209 ~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~--~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v  282 (423)
T PLN02397        209 VDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASG--DL-DADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS  282 (423)
T ss_pred             CCCCHHHHHHHHHHHHhCCcEEEEecccCCccCC--ch-hhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence            99   77889999999999999999999988641  00 000001 1111112 2455668999843 346679975

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.74  E-value=3.4e-16  Score=157.74  Aligned_cols=252  Identities=12%  Similarity=0.050  Sum_probs=159.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+.++.... .......+......++++.+++++|.+   ..++.++|++|+..++..+....      +
T Consensus        62 ~p~v~~a~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~la~~~g~~---~~~~~~sG~~an~~ai~~l~~~~------~  131 (407)
T PRK09064         62 HPKVIEAMIEALDRCGAGA-GGTRNISGTNHYHVELERELADLHGKE---AALVFTSGYVSNDATLSTLAKLI------P  131 (407)
T ss_pred             CHHHHHHHHHHHHHcCCCC-CCcCcCccCHHHHHHHHHHHHHHhCCC---cEEEECcHHHHHHHHHHHHhCCC------C
Confidence            7899999999887753321 111112233556677778888888742   34555667889998888875421      1


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                      +..|+.....|.+....+...++++..++.     .|++++++.++    +++++|++++++||+|.+.++++|.++|++
T Consensus       132 ~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~  206 (407)
T PRK09064        132 DCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADK  206 (407)
T ss_pred             CCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHH
Confidence            123555556788887888888888766653     36777777775    468899999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      ||+++++||+|+.+.+   ...|.+... .+. ...+|+++.+++|. +++.| |+++ .++++.+........|.    
T Consensus       207 ~~~~livDEa~~~G~~---g~~g~g~~~~~~~-~~~~div~~t~sKa-~g~~G-G~~~-~~~~~~~~l~~~~~~~~----  275 (407)
T PRK09064        207 YNALTYLDEVHAVGMY---GPRGGGIAERDGL-MDRIDIIEGTLAKA-FGVMG-GYIA-GSAALVDAVRSYAPGFI----  275 (407)
T ss_pred             cCCEEEEECCCccccc---CCCCCChHHhcCC-CCCCeEEEEecchh-hhccC-ceEe-cCHHHHHHHHHhCcccc----
Confidence            9999999999974332   112222111 111 12458888899998 46555 6644 45554432211112211    


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHhc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGFEA-QVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g-~~~~~~~~~~~~~~~~~~l  426 (435)
                          ...+.+....+++.++++.+...+ ..+++++..+.+.+.++++
T Consensus       276 ----~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~  319 (407)
T PRK09064        276 ----FTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA  319 (407)
T ss_pred             ----ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                111223333456667777665433 3466666777777766653

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.74  E-value=6.7e-17  Score=162.87  Aligned_cols=154  Identities=23%  Similarity=0.226  Sum_probs=123.2

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~  255 (435)
                      +.+.++++.|.+   ..++|+||+.|+..++.++.++++.        |+++++.|++    +...++..|++++.++. 
T Consensus        69 Le~~lA~leg~~---~al~~~sG~~Ai~~al~~ll~~GD~--------Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-  136 (431)
T PRK08248         69 FEKRIAALEGGI---GALAVSSGQAAITYSILNIASAGDE--------IVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-  136 (431)
T ss_pred             HHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence            444677777753   5689999999999999998877776        9999998876    34456678999999985 


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                          .|++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|++++...         ...++   ..|
T Consensus       137 ----~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~---------~~~pl---~~g  200 (431)
T PRK08248        137 ----SDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY---------LLRPI---EHG  200 (431)
T ss_pred             ----CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc---------cCChh---HcC
Confidence                37899999999999999999999999999999999999999999999999985321         11232   458


Q ss_pred             ccEEEecCCCCCCccC-CcEEEEEeCC
Q psy10210        336 VTSISVDTHKYGFTPK-GSSVVLYRDL  361 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~-g~g~il~~~~  361 (435)
                      +|+++.|.||++.++. .+|.+++.+.
T Consensus       201 aDivv~S~tK~lgg~g~~~Gg~v~~~~  227 (431)
T PRK08248        201 ADIVVHSATKFIGGHGTSIGGVIVDSG  227 (431)
T ss_pred             CCEEEEcCccccCCCCCceEEEEEeCC
Confidence            9999999999965553 2566566443

>PLN02271 serine hydroxymethyltransferase

Probab=99.74  E-value=3.4e-16  Score=157.53  Aligned_cols=235  Identities=15%  Similarity=0.088  Sum_probs=165.3

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCC---CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH------
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPE---TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA------  241 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~---~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~------  241 (435)
                      ..+.++|.-+.+...++||++..   .++-.. +|+.|+..++.++.+++|.        |+..+..|.++...      
T Consensus       190 ~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~--------IL~ldl~~GGHlshg~~~~~  260 (586)
T PLN02271        190 QYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDR--------IMGLDSPSGGHMSHGYYTPG  260 (586)
T ss_pred             hhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCCCCE--------EEEecCCCCCchhccccccc
Confidence            34668888889999999997763   244433 7899999999999999887        88877766654332      


Q ss_pred             ---HHHcCCEEEEEe--cC-CCccccHHHHHH-HhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccch
Q psy10210        242 ---ANYFGMKVKHIR--LT-SSYTVDLAALQS-AITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF  314 (435)
Q Consensus       242 ---~~~~g~~v~~vp--~~-~~~~~d~~~l~~-~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~  314 (435)
                         +...|..+..+|  ++ +++.+|.+++++ +...++++|++.+..+|  ..-|++++.++|+++|+++++|.+|..+
T Consensus       261 g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aG  338 (586)
T PLN02271        261 GKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISG  338 (586)
T ss_pred             ccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECccccc
Confidence               244566666665  65 678999999998 66789999999888887  5689999999999999999999999887


Q ss_pred             hhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC----C-------CCCc
Q psy10210        315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN----Y-------GSPS  383 (435)
Q Consensus       315 ~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~----~-------~~~~  383 (435)
                      +.+-    +.-..|++    ++|+++.++|||+.||.| |+++++++. ........-.|.+..    +       .-|.
T Consensus       339 LIa~----g~~~sP~~----~aDvvt~TTHKtLrGPrG-G~I~~r~~~-~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPg  408 (586)
T PLN02271        339 LVAA----KECVNPFD----YCDIVTSTTHKSLRGPRG-GIIFYRKGP-KLRKQGMLLSHGDDNSHYDFEEKINFAVFPS  408 (586)
T ss_pred             cccc----CcCCCCCc----CCcEEEeCCcccCCCCCc-eEEEecccc-cccccCCccccccccccHHHHHHhhcccCCc
Confidence            7631    11111333    589999999999999999 887886531 111000011111110    0       0133


Q ss_pred             cccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        384 VSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       384 ~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.|+.-...+|+...+++......|.+..+++.++++.+.+.|
T Consensus       409 lqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L  451 (586)
T PLN02271        409 LQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASAL  451 (586)
T ss_pred             cccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence            4444444556777777887766777777777777777776665

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.74  E-value=8e-17  Score=159.62  Aligned_cols=195  Identities=15%  Similarity=0.087  Sum_probs=133.5

Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhh
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAIT  270 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~  270 (435)
                      +.+++++|++|+.+++.++.++++.        |+++++.|..+...+    ...|++++.++.++++.        .+.
T Consensus        67 ~~v~~~sG~~Ai~~~l~all~~Gd~--------Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~--------~~~  130 (366)
T PRK07582         67 EALVFPSGMAAITAVLRALLRPGDT--------VVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE--------AAL  130 (366)
T ss_pred             CEEEECCHHHHHHHHHHHhcCCCCE--------EEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--------Hhc
Confidence            4677777889999999988777766        999999998876544    44699999998753221        234


Q ss_pred             cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc
Q psy10210        271 GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP  350 (435)
Q Consensus       271 ~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p  350 (435)
                      +++++|++++|+||+|.+.++++|.++|+++|+++++|++|+..         .+..+++   .|+|+++.|+|||+.|+
T Consensus       131 ~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~---------~~~~p~~---~g~Divv~S~sK~l~G~  198 (366)
T PRK07582        131 AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP---------LGQRPLE---LGADLVVASDTKALTGH  198 (366)
T ss_pred             cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc---------cccCchh---cCCcEEEecccccccCC
Confidence            68999999999999999999999999999999999999998531         1122444   37899999999997777


Q ss_pred             CC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHH-HHHHHHHHHHHHHHHhcC
Q psy10210        351 KG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV-WICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       351 ~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~-~~~~~~~~~~~~~~~~l~  427 (435)
                      .|  .|+++.+++++.+...... ...|.          ...  ...+|..++.+..-..+ ++..++.+.+.+.+++.+
T Consensus       199 ~g~~~G~v~~~~~~l~~~l~~~~-~~~g~----------~~~--~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p  265 (366)
T PRK07582        199 SDLLLGYVAGRDPELMAAVERWR-LLAGA----------IPG--PFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHP  265 (366)
T ss_pred             CCeeEEEEEcCcHHHHHHHHHHH-HHhCC----------CCC--HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCC
Confidence            76  4876666666544321111 11111          111  13566666655532222 444445555556666666


Q ss_pred             Ccc
Q psy10210        428 DLW  430 (435)
Q Consensus       428 ~l~  430 (435)
                      .+.
T Consensus       266 ~v~  268 (366)
T PRK07582        266 AVR  268 (366)
T ss_pred             Ccc
Confidence            654

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.74  E-value=1.2e-16  Score=161.09  Aligned_cols=153  Identities=20%  Similarity=0.211  Sum_probs=123.7

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~  254 (435)
                      ++.+.++++.|..   ..+++++|++|+.+++.++..+++.        |+++.+.|.+..    ..+...|++++.++.
T Consensus        67 ~le~~lA~l~g~~---~al~~~SG~~Ai~~al~all~pGd~--------VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (427)
T PRK05994         67 VLEERVAALEGGT---AALAVASGHAAQFLVFHTLLQPGDE--------FIAARKLYGGSINQFGHAFKSFGWQVRWADA  135 (427)
T ss_pred             HHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHHhCCCCE--------EEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence            4455777778765   3688899999999999999877776        999999998743    446778999998875


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +     |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++++....         ..++   ..
T Consensus       136 ~-----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~---------~~pl---~~  198 (427)
T PRK05994        136 D-----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL---------IRPI---EH  198 (427)
T ss_pred             C-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc---------CCcc---cc
Confidence            3     78999999999999999999999999999999999999999999999999864321         1233   35


Q ss_pred             CccEEEecCCCCCCccCC-cEEEEEe
Q psy10210        335 GVTSISVDTHKYGFTPKG-SSVVLYR  359 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g-~g~il~~  359 (435)
                      |+|+++.|.|||+.++.+ .|.+++.
T Consensus       199 gaDivv~S~tK~lgg~~~~~gG~v~~  224 (427)
T PRK05994        199 GADIVVHSLTKFLGGHGNSMGGIIVD  224 (427)
T ss_pred             CCcEEEEcCccccCCCCCcEEEEEEe
Confidence            899999999999665543 4554553

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.73  E-value=5.8e-16  Score=157.61  Aligned_cols=238  Identities=17%  Similarity=0.109  Sum_probs=149.3

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEE---cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC---Cchh---HHHHH
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCM---TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT---AHPA---FDKAA  242 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~---t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~---~~~~---~~~~~  242 (435)
                      ...++|..+++..+++|+.... ...+   .++|+.|+..++.++.+++|.        |+..+.   .|.+   .....
T Consensus        77 ~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~SG~~AN~av~~aL~~pgD~--------Il~~d~~~gGhl~H~~~~~g~  147 (475)
T PLN03226         77 YIDQIETLCQKRALEAFRLDPE-KWGVNVQPLSGSPANFAVYTALLQPHDR--------IMGLDLPHGGHLSHGYQTDGK  147 (475)
T ss_pred             hHHHHHHHHHHHHHHHhCCCcc-eeEEecCcCchHHHHHHHHHHhCCCCCE--------EEECCCCcCcchhhhhhhccc
Confidence            4567777778888899988765 2222   378899999999999988887        887442   3333   22222


Q ss_pred             HHcCCEE--E--EEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210        243 NYFGMKV--K--HIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA  316 (435)
Q Consensus       243 ~~~g~~v--~--~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~  316 (435)
                      +..+...  .  .++.+ +++.+|++++++++.. ++++|++.. ++ +|...|+++|.++|++||+++++|++|+.++.
T Consensus       148 ~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli  225 (475)
T PLN03226        148 KISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLV  225 (475)
T ss_pred             ccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEec-Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcc
Confidence            2222222  2  33344 6788999999998863 677666533 33 67788999999999999999999999988776


Q ss_pred             hcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC---CC--CCCCCCCCccccCCCch
Q psy10210        317 PFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS---DW--PGGNYGSPSVSGSRSGG  391 (435)
Q Consensus       317 ~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~---~~--~gg~~~~~~~~gsr~~~  391 (435)
                      +..   +.+ .++    .++|+++.++||++.||.| |+++++++ ..........   ++  .-.....+...++.+..
T Consensus       226 ~~~---~~~-~p~----~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~  295 (475)
T PLN03226        226 AAQ---EAA-SPF----EYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNH  295 (475)
T ss_pred             cCC---CCC-CCC----CCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHHHhccccCCccCCCchHH
Confidence            321   111 122    2699999999999889998 77777653 2211000000   00  00000012233444555


Q ss_pred             HHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        392 IIATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       392 ~ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      .+++..++++.+-   .+.|.+++.++.+.+.+.+.+ .++..
T Consensus       296 ~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l  337 (475)
T PLN03226        296 TIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKL  337 (475)
T ss_pred             HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEE
Confidence            5667777777764   445566666666666665554 34443

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.73  E-value=2.7e-16  Score=156.64  Aligned_cols=159  Identities=18%  Similarity=0.182  Sum_probs=120.1

Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-Ccc
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYT  259 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~~  259 (435)
                      +++++.+|.   +++++|+||++|+.+++.++ .++++.        |+++.++|+++..++...|++++.+++++ ++.
T Consensus        38 ~~la~~~g~---~~~v~~~sgt~al~~~l~~~~~~~Gd~--------Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~  106 (375)
T PRK11706         38 QWLEQRFGS---AKVLLTPSCTAALEMAALLLDIQPGDE--------VIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMN  106 (375)
T ss_pred             HHHHHHhCC---CeEEEECCHHHHHHHHHHHhCCCCCCE--------EEECCCCcHHHHHHHHHcCCEEEEEecCCCcCC
Confidence            344555554   27899999999999988766 355555        99999999999999999999999999984 467


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEE
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSI  339 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~  339 (435)
                      +|++++++++++++++|++++   ++|...++++|.++|++||+++|+|++|+.+.. +.   |.   +..  . ..|.-
T Consensus       107 ~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~-~~---~~---~~g--~-~~~~~  173 (375)
T PRK11706        107 IDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMST-YK---GR---ALG--T-IGHIG  173 (375)
T ss_pred             cCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccc-cC---Ce---eee--c-CcCEE
Confidence            999999999999999998764   589999999999999999999999999976542 11   11   110  0 12555


Q ss_pred             EecCC--CCCCccCCcEEEEEeCCcccc
Q psy10210        340 SVDTH--KYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       340 ~~s~h--K~~~~p~g~g~il~~~~~~~~  365 (435)
                      ++|+|  |.+..+.| |+++++++++.+
T Consensus       174 ~~Sf~~~K~l~~g~g-G~~~~~~~~~~~  200 (375)
T PRK11706        174 CFSFHETKNYTAGEG-GALLINDPALIE  200 (375)
T ss_pred             EEeCCCCccccccCC-eEEEECCHHHHH
Confidence            66666  98533333 555666666543

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.73  E-value=2.9e-16  Score=157.09  Aligned_cols=254  Identities=13%  Similarity=0.053  Sum_probs=161.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++++++.+.+.++.... ..+..+-+......++++.+++++|.+.  .+++++| +.++..++.++.+++|.    
T Consensus        13 ~~~~~~~~~~~a~~~~g~~~-~~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG-~~a~~~~i~~l~~~GD~----   84 (392)
T PLN03227         13 SSPTLRQTALESLSHYGCGS-CGPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDG-ASTTSSTVAAFAKRGDL----   84 (392)
T ss_pred             CCHHHHHHHHHHHHHhCCCC-cccccccCChHHHHHHHHHHHHHhCCCc--EEEecCc-HHHHHHHHHHhCCCCCE----
Confidence            47899999999988754332 2222222333466777888999998752  4555554 55666888888777776    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-----------cCceEEEEeCCCCCcccccCHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-----------GNTVMLVGSMPNFPYGTMDDIG  292 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-----------~~~~~v~~~~p~nptG~~~~i~  292 (435)
                          |+++++.|.++...+...+++++.++.++  .-|++.+.+.+.           +++++|+++.+.||+|.+.+++
T Consensus        85 ----Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~  158 (392)
T PLN03227         85 ----LVVDRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLK  158 (392)
T ss_pred             ----EEEeccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHH
Confidence                99999999999888888888887777532  123444443442           3688999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCC-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFS-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV  370 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~  370 (435)
                      +|.++|++||+++|+|++++....   ...|.+.. -+... ..++|+++.+.+|+ ++|.| |+++ .++++.+...  
T Consensus       159 ~i~~l~~~~g~~livDe~~~~g~~---g~~G~g~~~~~g~~p~~~~Div~~slsk~-~g~~g-g~v~-~~~~~~~~~~--  230 (392)
T PLN03227        159 ELVALKEEFHYRLILDESFSFGTL---GKSGRGSLEHAGLKPMVHAEIVTFSLENA-FGSVG-GMTV-GSEEVVDHQR--  230 (392)
T ss_pred             HHHHHHHHcCCEEEEECccccccc---CCCCCcHHHHcCCCCCCCceEEEeechhh-hhccC-cEEe-cCHHHHHHHH--
Confidence            999999999999999999972222   11121100 01111 23789999999998 56664 5544 4445443211  


Q ss_pred             cCCCCCCCCCCCccccCCCchHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAM-MYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l-~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                       ....+     .+..++-+....+++.+++ ..+..+...++++++.+++.+.+++
T Consensus       231 -~~~~~-----~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~  280 (392)
T PLN03227        231 -LSGSG-----YCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN  280 (392)
T ss_pred             -HhCcC-----ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence             10111     1222332222222333333 3344556777778777777777763

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.73  E-value=1.7e-16  Score=159.93  Aligned_cols=156  Identities=19%  Similarity=0.172  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHI  252 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~v  252 (435)
                      ..++++.++++.|..   ..+++++|+.|+.+++.++..+++.        ||++...|.+..    ..+...|++++.+
T Consensus        71 ~~~le~~la~l~g~~---~~v~fsSG~~Ai~~al~~ll~~Gd~--------VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v  139 (437)
T PRK05613         71 VEALENRIASLEGGV---HAVAFASGQAAETAAILNLAGAGDH--------IVTSPRLYGGTETLFLVTLNRLGIEVTFV  139 (437)
T ss_pred             HHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHhcCCCCE--------EEECCCccHHHHHHHHHHHHhcCeEEEEE
Confidence            344556778888773   3456666679999888887666665        999999999863    4457789999999


Q ss_pred             ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      + +.   .|+++++++++++|++|+++.+.||+|.+.|+++|.++|+++|+++|+|++++.+..            .+..
T Consensus       140 d-~~---~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~------------~~p~  203 (437)
T PRK05613        140 E-NP---DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL------------VRPL  203 (437)
T ss_pred             C-CC---CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc------------cChH
Confidence            7 32   288999999999999999999999999999999999999999999999999864322            1222


Q ss_pred             CCCccEEEecCCCCCCccC--CcEEEEEeC
Q psy10210        333 LPGVTSISVDTHKYGFTPK--GSSVVLYRD  360 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~--g~g~il~~~  360 (435)
                      ..|+|++++|+|||+ +|.  ++|.+++.+
T Consensus       204 ~~GaDivv~S~~K~l-~G~gd~~gG~vv~~  232 (437)
T PRK05613        204 ELGADVVVASLTKFY-TGNGSGLGGVLIDG  232 (437)
T ss_pred             HhCCCEEEeecccee-cCCCcceeEEEEec
Confidence            458999999999995 554  345555544

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.73  E-value=2.2e-15  Score=160.91  Aligned_cols=325  Identities=13%  Similarity=0.124  Sum_probs=207.0

Q ss_pred             hchhhHHHHHHHHHHHH----HHHHhh-hhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC--
Q psy10210         71 KIPAVRKKLEEETGKVA----KLFQDD-IKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY--  143 (435)
Q Consensus        71 ~lp~~~~~i~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--  143 (435)
                      ++-...+.+++||+.+.    +++.+. ++... ...-..++|+. .++.++++.+.+...++.. + ..+.+.+.|.  
T Consensus         2 h~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i-~~~~~l~lp~~-~sE~e~~~~~~~la~~N~~-~-~~fig~G~y~~~   77 (939)
T TIGR00461         2 HLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNI-LKRRPLQLEAP-SKEYEALAHLKKIASKNHK-F-KSYIGMGYYGTI   77 (939)
T ss_pred             CCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHH-hcCCCCCCCCC-CCHHHHHHHHHHHHhcCCC-c-cccCCCCcCCCc
Confidence            34344556677776543    444444 22211 11112467774 7999999999998877532 1 1222222222  


Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      -++.+.+.+.+.-+-+....|++++.+++..++..+...++++++|.+.. +..+..++|.+...++.+.+...    + 
T Consensus        78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~a-NaSl~d~atA~aEa~~~a~~~~~----~-  151 (939)
T TIGR00461        78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVA-NASLLDEGTAAAEAMALSFNVSK----K-  151 (939)
T ss_pred             CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChh-hhhccchhhHHHHHHHHHHHhhc----C-
Confidence            24555546654333222336999999999999999999999999999875 77889999988887777764321    1 


Q ss_pred             CCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                      ++.+|++++..|+......    +..|++++.++        ++++++.+  +++++++.+|++ .|.++|+++|+++++
T Consensus       152 ~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i~~~~h  220 (939)
T TIGR00461       152 KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--DVFGCLLQYPAT-DGSILDYKQLIDALH  220 (939)
T ss_pred             CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--CEEEEEEECCCC-CeEEecHHHHHHHHH
Confidence            2457999999999976544    46788888874        34566555  588899999987 999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC----ccCCcEEEEEeCCcccccccc----cc
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF----TPKGSSVVLYRDLKYKHCQYF----VT  371 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~----~p~g~g~il~~~~~~~~~~~~----~~  371 (435)
                      +.|.+++++.-.-.+..           ..+..+.|+|+++.+.++||.    |.++.|++.++++ +.+..-.    ..
T Consensus       221 ~~gal~~~~ad~~al~l-----------l~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~-l~r~lPgrivG~s  288 (939)
T TIGR00461       221 SHKSLVSVAADLMALTL-----------LTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDE-YNRKMPGRIVGVS  288 (939)
T ss_pred             HcCCEEEEEechHHhCC-----------cCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHh-hHhhCCCCceeEE
Confidence            99999999776543322           233445689999888888854    3344788777765 3222100    00


Q ss_pred             CCCCCCC-CC----C--CccccCCC------chHHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        372 SDWPGGN-YG----S--PSVSGSRS------GGIIATCWAA--MMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       372 ~~~~gg~-~~----~--~~~~gsr~------~~~ia~~~a~--l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .+-.|.. |.    +  ..+.--+.      +..+.+..++  +.++|.+|+++..+++..++..+.+.|.+
T Consensus       289 ~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~  360 (939)
T TIGR00461       289 KDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN  360 (939)
T ss_pred             ecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            1111110 00    0  00000001      1122222333  77899999999888888777766665544

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.73  E-value=2.9e-16  Score=158.26  Aligned_cols=157  Identities=19%  Similarity=0.179  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp  253 (435)
                      .++++.++++.|.+   ..+++++|++|+..++.++..+++.        |+++++.|.+.    ...+...|++++.++
T Consensus        60 ~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~~l~~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~  128 (418)
T TIGR01326        60 DVLEQRIAALEGGV---AALAVASGQAAITYAILNLAQAGDN--------IVSSSYLYGGTYNLFKHTLKRLGIEVRFVD  128 (418)
T ss_pred             HHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHHhCCCCE--------EEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence            35566778888763   5689999999999999998877776        99999988763    445677899999988


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      .+     |++++++++++++++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+..         ..++   .
T Consensus       129 ~~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~---------~~~l---~  191 (418)
T TIGR01326       129 PD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL---------CRPI---D  191 (418)
T ss_pred             CC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc---------CCch---h
Confidence            53     89999999999999999999999999999999999999999999999999974321         1122   3


Q ss_pred             CCccEEEecCCCCCCcc-CCcEEEEEeCCc
Q psy10210        334 PGVTSISVDTHKYGFTP-KGSSVVLYRDLK  362 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p-~g~g~il~~~~~  362 (435)
                      .|+|+++.|++|++.++ ..+|+++++.+.
T Consensus       192 ~g~Divv~S~sK~l~g~G~~lGg~v~~~~~  221 (418)
T TIGR01326       192 HGADIVVHSATKYIGGHGTAIGGVIVDGGK  221 (418)
T ss_pred             cCCeEEEECccccccCCccceEEEEEeccc
Confidence            47899999999996443 336776776544

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.73  E-value=2.5e-16  Score=158.99  Aligned_cols=254  Identities=17%  Similarity=0.079  Sum_probs=167.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.....   +..  .....+...++.+.++++++.+.+ ++++++||++|+..++++++....     
T Consensus        53 ~~p~v~~a~~~~~~~~~~---~~~--~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgsea~~~al~~~~~~~~-----  121 (413)
T cd00610          53 NHPEVVEALKEQLAKLTH---FSL--GFFYNEPAVELAELLLALTPEGLD-KVFFVNSGTEAVEAALKLARAYTG-----  121 (413)
T ss_pred             CCHHHHHHHHHHHHhCcC---ccC--cccCCHHHHHHHHHHHHhCCCCCC-EEEEcCcHHHHHHHHHHHHHHHcC-----
Confidence            589999999998864211   111  112457788888999999986444 899999999999999999874321     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCC------CccccHHHHHHHhhc---CceEEEEeCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTS------SYTVDLAALQSAITG---NTVMLVGSMP  281 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~------~~~~d~~~l~~~i~~---~~~~v~~~~p  281 (435)
                       +++|++.++.|++....+... +            .+++.+|.+.      ++..|++++++.+.+   ++++++++..
T Consensus       122 -~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~  200 (413)
T cd00610         122 -RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPI  200 (413)
T ss_pred             -CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccc
Confidence             245999999888855443332 1            2356666552      234589999999876   5678888777


Q ss_pred             CCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEE
Q psy10210        282 NFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL  357 (435)
Q Consensus       282 ~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il  357 (435)
                      ++++|.+.+    +++|.++|++||+++|+||+|+++..     .|.. ..++......|++++|  |++.++.++|+++
T Consensus       201 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~-----~g~~-~~~~~~~~~~d~~t~s--K~l~~g~~~g~~~  272 (413)
T cd00610         201 QGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGR-----TGKM-FAFEHFGVEPDIVTLG--KGLGGGLPLGAVL  272 (413)
T ss_pred             cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Ccch-hhHhhcCCCCCeEEEc--ccccCccccEEEE
Confidence            788898755    99999999999999999999987522     1110 0111111124666555  9866667789866


Q ss_pred             EeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      . ++++.+.. ........+     +.  +.+....+++.++++.+..+.+.++++++.+.+.+.++.+
T Consensus       273 ~-~~~~~~~~-~~~~~~~~~-----t~--~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~  332 (413)
T cd00610         273 G-REEIMDAF-PAGPGLHGG-----TF--GGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLREL  332 (413)
T ss_pred             E-cHHHHHhh-ccCCCCCCC-----CC--CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            5 45554431 000111111     11  1223344677788888877778888888888888777655

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.73  E-value=9e-17  Score=158.77  Aligned_cols=165  Identities=21%  Similarity=0.168  Sum_probs=119.5

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK  250 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~  250 (435)
                      |...++|+    .++++.|.   +.+++++||++|+.+++. +.+++|.        |+++.+.|.+....+.....+- 
T Consensus        54 p~~~~le~----~lA~leg~---~~~v~~~sG~aAi~~~l~-~l~~GD~--------VI~~~~~yg~~~~~~~~~~~~~-  116 (364)
T PRK07269         54 PTRAKLEE----TLAAIESA---DYALATSSGMSAIVLAFS-VFPVGSK--------VVAVRDLYGGSFRWFNQQEKEG-  116 (364)
T ss_pred             ccHHHHHH----HHHHHhCC---CeEEEeCCHHHHHHHHHH-HhCCCCE--------EEEecCCcCchHHHHHHHHhcC-
Confidence            44445444    55666654   368999999999999994 5566665        9999998877544332221000 


Q ss_pred             EEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        251 HIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       251 ~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                      .+.+  ++..|+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+....         ..|+ 
T Consensus       117 ~~~~--~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~---------~~pl-  184 (364)
T PRK07269        117 RFHF--TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY---------QRPI-  184 (364)
T ss_pred             cEEE--EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCch-
Confidence            1111  133589999999999999999999999999999999999999999999999999753221         1233 


Q ss_pred             CCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        331 FSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                        ..|+|+++.|.+|++.|+..  .|+++.+++++.+.
T Consensus       185 --~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~  220 (364)
T PRK07269        185 --ELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEK  220 (364)
T ss_pred             --hhCCcEEEecCceeccCCCcccceEEEeCcHHHHHH
Confidence              35899999999999766544  47767677766543

>PLN02483 serine palmitoyltransferase

Probab=99.73  E-value=5.5e-16  Score=158.95  Aligned_cols=199  Identities=13%  Similarity=0.064  Sum_probs=137.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      ++...+++.+++.++... ...+...-+......++++.+|+++|.+.  .+++++ |..++..++.++.++++.     
T Consensus       117 ~~~~~~~~~~ai~~~g~~-~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~-G~~an~~~i~al~~~Gd~-----  187 (489)
T PLN02483        117 DEYCTPRVIESLKKYSAS-TCSSRVDGGTTKLHRELEELVARFVGKPA--AIVFGM-GYATNSTIIPALIGKGGL-----  187 (489)
T ss_pred             CHHHHHHHHHHHHHhCCC-CCccccccCCcHHHHHHHHHHHHHhCCCc--EEEECC-HHHHHHHHHHHhCCCCCE-----
Confidence            355677777777765322 11222223445667778888999998532  455555 577777888888877776     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-------cCc-----e-EEEEeCCCCCcccccCH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-------GNT-----V-MLVGSMPNFPYGTMDDI  291 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-------~~~-----~-~v~~~~p~nptG~~~~i  291 (435)
                         |++++++|+++...++..|++++.+|.+     |++++++.+.       +++     + +|+++...|++|.+.++
T Consensus       188 ---Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l  259 (489)
T PLN02483        188 ---IISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKL  259 (489)
T ss_pred             ---EEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCH
Confidence               9999999999999999999999999864     3455554443       222     4 45555666899999999


Q ss_pred             HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      ++|.++|++||+++++||+|+.+..   ...|.+.. .++....++|++..+++|. +++.| |+ ++.++++.+.
T Consensus       260 ~~I~~la~~~~~~livDEa~s~g~~---G~~G~g~~~~~~v~~~~~dI~~~SfSKs-~g~~G-G~-i~~~~~li~~  329 (489)
T PLN02483        260 PEIVAVCKKYKAYVYLDEAHSIGAV---GKTGRGVCELLGVDPADVDIMMGTFTKS-FGSCG-GY-IAGSKELIQY  329 (489)
T ss_pred             HHHHHHHHHcCCEEEEECcCccCcc---CCCCCchHHhcCCCcccCcEEEEecchh-cccCc-eE-EEcCHHHHHH
Confidence            9999999999999999999974332   12222211 1222234689999999998 56665 77 4455665544

>PRK05939 hypothetical protein; Provisional

Probab=99.73  E-value=1.3e-16  Score=159.27  Aligned_cols=150  Identities=16%  Similarity=0.089  Sum_probs=118.7

Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH---HHHHHHcCCEEEEEecCCCc
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---DKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~---~~~~~~~g~~v~~vp~~~~~  258 (435)
                      +.++++.|...   .+++++|+.|+..++.++.++++.        |+++++.|++.   ...++..|++++.+++    
T Consensus        54 ~~la~leg~~~---~v~~ssG~~Ai~~~l~all~~Gd~--------Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~----  118 (397)
T PRK05939         54 AKITKMEGGVG---TVCFATGMAAIAAVFLTLLRAGDH--------LVSSQFLFGNTNSLFGTLRGLGVEVTMVDA----  118 (397)
T ss_pred             HHHHHHhCCCe---EEEeCCHHHHHHHHHHHHcCCCCE--------EEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence            35566666643   356666799999999998877776        99999988753   3456678999999986    


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccE
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTS  338 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~  338 (435)
                       .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++...            .++....|+|+
T Consensus       119 -~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~------------~~~~~~~gaDi  185 (397)
T PRK05939        119 -TDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW------------LFRPKDVGASL  185 (397)
T ss_pred             -CCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc------------ccCccccCCEE
Confidence             37899999999999999999999999999999999999999999999999986431            23344458999


Q ss_pred             EEecCCCCCCccCC-cEEEEEe
Q psy10210        339 ISVDTHKYGFTPKG-SSVVLYR  359 (435)
Q Consensus       339 ~~~s~hK~~~~p~g-~g~il~~  359 (435)
                      +..|+||++.++.. +|.++..
T Consensus       186 vv~S~sK~~~g~g~~igg~v~~  207 (397)
T PRK05939        186 VINSLSKYIAGHGNALGGAVTD  207 (397)
T ss_pred             EEecCeecccCCCCeEEEEEec
Confidence            99999999655422 3554543

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.72  E-value=1.1e-16  Score=158.19  Aligned_cols=257  Identities=10%  Similarity=0.003  Sum_probs=170.2

Q ss_pred             hHhHHHHHHHHHHhhc---CCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210        145 QQDLVDLLTEVFGLTS---YTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREE  220 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~---~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~  220 (435)
                      ++++++++.+.+..+.   .+.+...+..+.+.++..++++.+++++|.+.+. .++++++||.+++.++..+..++++ 
T Consensus        15 p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~-   93 (360)
T PRK05355         15 PEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKK-   93 (360)
T ss_pred             CHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCe-
Confidence            4555555555443211   1112223456677889999999999999985433 4555588899999999998876655 


Q ss_pred             cCCCCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCC-CccccHHHHHH-HhhcCceEEEEeCCCCCccccc-CHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTS-SYTVDLAALQS-AITGNTVMLVGSMPNFPYGTMD-DIGAIA  295 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~-~~~~d~~~l~~-~i~~~~~~v~~~~p~nptG~~~-~i~~i~  295 (435)
                             +++......+  +.+.++..|.. ..++.+. .+..+..++++ ++++++++|.+++..|.||... ++++| 
T Consensus        94 -------~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i-  164 (360)
T PRK05355         94 -------ADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT-  164 (360)
T ss_pred             -------EEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc-
Confidence                   5444444443  56778888865 6666553 55566666666 7878899999999999999996 77776 


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc--cCC
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV--TSD  373 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~--~~~  373 (435)
                           ||++++||++++.+.           .++|+..  .|++++|+||+ +||.|+|+++++++.+.+.....  ..+
T Consensus       165 -----~g~l~vVDavss~g~-----------~~idv~~--~d~~~~ssqK~-lgP~Glg~l~~s~~~l~~~~~~~~~~~~  225 (360)
T PRK05355        165 -----GDVPLVADMSSDILS-----------RPIDVSK--FGLIYAGAQKN-IGPAGLTIVIVREDLLGRALPSIPSMLD  225 (360)
T ss_pred             -----CCCcEEEEcCccccC-----------ccCCHHH--ccEEEEecccc-ccCCceEEEEECHHHHhhcccCCChHHH
Confidence                 899999999986443           3677654  46999999998 57999999888876553311100  000


Q ss_pred             CCCCCCCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       374 ~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      |... .......++.+...+.++.++++.+..+ |+.++.++..+..+.+++.+.++..
T Consensus       226 ~~~~-~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~  283 (360)
T PRK05355        226 YKTH-ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF  283 (360)
T ss_pred             HHHH-HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            0000 0112234677777777888888887666 5666666666655555555554443

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.72  E-value=4.9e-16  Score=155.03  Aligned_cols=252  Identities=15%  Similarity=0.046  Sum_probs=161.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|.+.+++.+.+.........    +  ..+...++.+.+++++|.+   ++++++||++|+.+++++++..... +|.+
T Consensus        45 ~p~v~~a~~~~~~~~~~~~~~----~--~~~~~~~l~~~la~~~g~~---~~~~~~sg~~a~~~a~~~~~~~~~~-~~~~  114 (379)
T TIGR00707        45 HPKLVEALKEQLEKLVHVSNL----Y--YTEPQEELAEKLVEHSGAD---RVFFCNSGAEANEAALKLARKYTGD-KGKE  114 (379)
T ss_pred             CHHHHHHHHHHHhhccccccc----c--CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHhhc-cCCC
Confidence            688999998888764221111    1  2345667778888888763   7999999999999999987543221 1222


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEE----EEecCCCccc----cHHHHHHHhhcCceEEEEeCCCCCcccc----cCHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVK----HIRLTSSYTV----DLAALQSAITGNTVMLVGSMPNFPYGTM----DDIG  292 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~----~vp~~~~~~~----d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~i~  292 (435)
                      +++|++++++|+.+...+...+....    ..|+..+...    |++++++.+++++++|+++++++++|..    ++++
T Consensus       115 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~  194 (379)
T TIGR00707       115 KKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLK  194 (379)
T ss_pred             CCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHH
Confidence            45699999999887766665554322    1233222222    8999999998889999998887777864    4589


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS  372 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~  372 (435)
                      +|.++|++||+++|+||+|+++...     |.. .++.......|+++  ++|...++.++|+++.+ +++.+...   .
T Consensus       195 ~i~~l~~~~~~~~i~De~~~~~~~~-----g~~-~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~-~~~~~~~~---~  262 (379)
T TIGR00707       195 ALREICKDKDALLIFDEVQTGIGRT-----GKF-FAYEHYGIEPDIIT--LAKGLGGGVPIGATLAK-EEVAEAFT---P  262 (379)
T ss_pred             HHHHHHHHcCCEEEEeccccCCCcc-----chh-hhHHhcCCCCCEEE--EcccccCCcccEEEEEc-HHHHhhhc---C
Confidence            9999999999999999999876331     110 01111111235554  46986555678986654 55544321   1


Q ss_pred             CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ...+..     ..  -+....+++.++++.+...++.+++++..+.+.+.+++
T Consensus       263 ~~~~~~-----~~--~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~  308 (379)
T TIGR00707       263 GDHGST-----FG--GNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEE  308 (379)
T ss_pred             CCCCCC-----CC--CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence            111111     11  12334457777788776667778888877777766654

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.72  E-value=8.7e-16  Score=154.74  Aligned_cols=199  Identities=16%  Similarity=0.157  Sum_probs=136.9

Q ss_pred             hHhHHHHHHHHH-HhhcCCCCCCCC--cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        145 QQDLVDLLTEVF-GLTSYTNPLHPD--IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       145 ~~~l~~~i~~~~-~~~~~~~~~~~~--~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                      +|.+++++...+ .++..+.+...-  ..+...++|.-+.+.+++++|.+.  ..+++++|+.|+..++.++..++|.  
T Consensus        41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al~~~GD~--  116 (416)
T PRK13034         41 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLALLKPGDT--  116 (416)
T ss_pred             CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHhcCCCCE--
Confidence            566666666664 443222111111  025677777777789999998763  3456789999999999999888877  


Q ss_pred             CCCCCeEEEeCCCchh-HHHHHHH--cCCEE--EEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHH
Q psy10210        222 GISLPEIVLPTTAHPA-FDKAANY--FGMKV--KHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAI  294 (435)
Q Consensus       222 g~~~~~viv~~~~~~~-~~~~~~~--~g~~v--~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i  294 (435)
                            |++++..|.+ +...++.  .+...  ..++++ .++.+|++++++.+.. ++++|+++.+.  +|...|+++|
T Consensus       117 ------Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l  188 (416)
T PRK13034        117 ------ILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARF  188 (416)
T ss_pred             ------EEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHH
Confidence                  9999999977 2222221  12222  344444 4567899999998854 67888876554  4677899999


Q ss_pred             HHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        295 AKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       295 ~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      .++|++||+++++|++++.++...    |.  .....  .++|++++++||++.||.| |+++.+++.+.
T Consensus       189 ~~la~~~g~~livD~Aha~G~~~~----g~--~~~~~--~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~  249 (416)
T PRK13034        189 REIADEVGALLMVDMAHIAGLVAA----GE--HPNPF--PHAHVVTTTTHKTLRGPRG-GMILTNDEEIA  249 (416)
T ss_pred             HHHHHHcCCEEEEeCcccccCccc----CC--CCCCC--CCceEEEEeCcccCCCCCC-eEEEECcHHHH
Confidence            999999999999999998766531    21  11122  3589999999999777877 66566665543

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.72  E-value=1.3e-16  Score=158.11  Aligned_cols=160  Identities=13%  Similarity=0.073  Sum_probs=127.4

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g  246 (435)
                      |....+|.    .++++-|+.   ..+++++|+.|+.+++.++.++++.        |++++..|.+....+    +.+|
T Consensus        62 Pt~~~le~----~la~LEg~~---~a~~~~SGmaAi~~~~~~ll~~GD~--------Vv~~~~~Yg~t~~l~~~~l~~~G  126 (395)
T PRK08114         62 LTHFSLQE----AMCELEGGA---GCALYPCGAAAVANAILAFVEQGDH--------VLMTGTAYEPTQDFCSKILSKLG  126 (395)
T ss_pred             hhHHHHHH----HHHHHhCCC---eEEEEhHHHHHHHHHHHHHcCCCCE--------EEEeCCCcHHHHHHHHHHHHhcC
Confidence            44555554    556666553   4677888999999999998877776        999999998866554    5679


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC--CcEEEeccccchhhhcccccCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG--IPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~--~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +++..++.     .|.++++++++++|++|++++|+||+|.+.|+++|+++|+++|  ++++||.+++...         
T Consensus       127 i~v~~vd~-----~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~---------  192 (395)
T PRK08114        127 VTTTWFDP-----LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGV---------  192 (395)
T ss_pred             cEEEEECC-----CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcccc---------
Confidence            99998874     3678999999999999999999999999999999999999985  9999999986432         


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccC--CcEEEEEeCCcc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPK--GSSVVLYRDLKY  363 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~--g~g~il~~~~~~  363 (435)
                         .++....|+|+++.|.|||++|+.  +.|++ +.+++.
T Consensus       193 ---~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v-~~~~~~  229 (395)
T PRK08114        193 ---LFKALDFGIDISIQAGTKYLVGHSDAMIGTA-VANARC  229 (395)
T ss_pred             ---ccCHHHcCCcEEEEcCcccccCCCcceeEEE-EcCHHH
Confidence               245556699999999999988884  56754 444443

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.72  E-value=1.3e-15  Score=153.51  Aligned_cols=253  Identities=12%  Similarity=-0.009  Sum_probs=159.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++++++.+++.++.... .......+..+...++.+.+++++|.+   ..+++++|++|+..++.++....      
T Consensus        60 ~~p~v~~a~~~~~~~~~~~~-~~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~SG~~An~~ai~~l~~~~------  129 (406)
T PRK13393         60 QHPAVLAAMHEALDTCGAGA-GGTRNISGTNHYHVLLEAELADLHGKE---AALLFTSGYVSNWAALSTLGSRL------  129 (406)
T ss_pred             CCHHHHHHHHHHHHHcCCCC-cccccccCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHHHHHhhcCC------
Confidence            38999999999998754322 111112233446677888999999863   44556666789999998764310      


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                      ++..|++....|.++...++..|.+++.+|.     .|++++++.+.    +++++|++++++|++|.+.|+++|.++|+
T Consensus       130 ~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~  204 (406)
T PRK13393        130 PGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAE  204 (406)
T ss_pred             CCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHH
Confidence            1234777778999988888888988877764     36667776664    35789999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      +||+++++|++|+.+++   ...|.+..........+|++..++.|.. +..| |++ +.++++.+........|.    
T Consensus       205 ~~~~~livDea~~~g~~---g~~G~g~~~~~~~~~~~~i~~~tlsKa~-g~~G-G~~-~~~~~~~~~l~~~~~~~~----  274 (406)
T PRK13393        205 KHGAMTYLDEVHAVGLY---GPRGGGIAEREGLADRLTIIEGTLAKAF-GVMG-GYI-TGSAALCDFIRSFASGFI----  274 (406)
T ss_pred             HcCCEEEEECCcccccc---CCCCCchhhhcCCCCCCeEEEEeCchhh-cccC-cee-eCCHHHHHHHHHhCcCce----
Confidence            99999999999984433   1122211001111233678878899984 5444 664 445554433211111111    


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHh
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGFEAQ-VWICVRYHFNYKSCLQN  425 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g~-~~~~~~~~~~~~~~~~~  425 (435)
                          ..++.+....+++.++++.+...+. .++.++..+++.+.+++
T Consensus       275 ----~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~  317 (406)
T PRK13393        275 ----FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDK  317 (406)
T ss_pred             ----ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence                1233444444566677776543321 23334555555555554

>PRK15029 arginine decarboxylase; Provisional

Probab=99.72  E-value=1.3e-15  Score=160.28  Aligned_cols=225  Identities=20%  Similarity=0.170  Sum_probs=162.9

Q ss_pred             HHHHHHHHHHhCCCCCCCCCcccccccC-ChH---hHHHHHHH-HHHh------hcCCCCCCCCcChhHHHHHHHHHHHH
Q psy10210        116 EILELVSNYLARGHYDWKHGRVSGAVYY-YQQ---DLVDLLTE-VFGL------TSYTNPLHPDIFPGVCKMEAEVIKMC  184 (435)
Q Consensus       116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~l~~~i~~-~~~~------~~~~~~~~~~~~~~~~~~e~~~~~~l  184 (435)
                      .+++.+.++.+.+...|+-+...++... -.|   .+.+..-+ .+..      ....+.+++      .....+..+..
T Consensus       141 pl~~aL~~y~~~~~~~fH~PGHk~G~~~~~~~~~~~~~~f~G~~~~~~Dlt~ev~glD~L~~p------~G~I~eAq~~a  214 (755)
T PRK15029        141 PLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDH------TGAFGESEKYA  214 (755)
T ss_pred             HHHHHHHHHHcCCCceeeCCCCCCCCCCCCCchhHHHHHHhccchhhccccccccCCCCCCCC------CcHHHHHHHHH
Confidence            4788899998888777765554433321 122   23333211 1111      011122222      24566777889


Q ss_pred             HHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC----cc
Q psy10210        185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS----YT  259 (435)
Q Consensus       185 a~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~----~~  259 (435)
                      |+.||++.  .-++++|+|.+|..++.+++.+++.        |+++..+|-++..++...|+.+++++.. +.    +.
T Consensus       215 A~~fgA~~--t~FlvNGST~gn~a~i~a~~~~gd~--------Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~  284 (755)
T PRK15029        215 ARVFGADR--SWSVVVGTSGSNRTIMQACMTDNDV--------VVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGP  284 (755)
T ss_pred             HHHhCCCc--EEEEeCChhHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence            99999875  5799999999999999999988887        9999999999999999999999999754 21    23


Q ss_pred             cc-----HHHHHHHhhcC--ce--------EEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        260 VD-----LAALQSAITGN--TV--------MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       260 ~d-----~~~l~~~i~~~--~~--------~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      ++     ++.+++++.++  .+        ++++++|++ .|.+.++++|+++|++++++|+||||||+... |..  .+
T Consensus       285 i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~-F~~--~~  360 (755)
T PRK15029        285 IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR-FNP--IY  360 (755)
T ss_pred             CCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccc-cCc--cc
Confidence            44     88999988642  33        899999988 89999999999999999999999999998653 211  11


Q ss_pred             CCCCCCC-----CCCCcc-EEEecCCCCCCccCCcEEEEEeCC
Q psy10210        325 PLPPFDF-----SLPGVT-SISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       325 ~~~~~d~-----~~~gvd-~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      +. ...+     ...|+| +++.|+||.+.+...++++.++++
T Consensus       361 p~-~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~  402 (755)
T PRK15029        361 AD-HYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG  402 (755)
T ss_pred             cc-cccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence            10 0112     125788 888899999888888899988765

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.72  E-value=3e-16  Score=158.00  Aligned_cols=155  Identities=19%  Similarity=0.185  Sum_probs=121.8

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~  254 (435)
                      ++.+.++++.|.+   ..+++++|+.|+.+++.++..+++.        |+++...|.+....    +...|++++.++ 
T Consensus        73 ~Le~~lA~l~g~~---~av~~sSG~aAi~~al~all~~Gd~--------Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (436)
T PRK07812         73 VVEQRIAALEGGV---AALLLASGQAAETFAILNLAGAGDH--------IVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-  140 (436)
T ss_pred             HHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHHhCCCCE--------EEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence            4455777888765   3588888999999999998877776        99999888875543    344688887775 


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +.   .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|++++||++++....         ..++   ..
T Consensus       141 d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~---------~~pl---~~  205 (436)
T PRK07812        141 DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL---------IRPL---EH  205 (436)
T ss_pred             CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---hc
Confidence            22   389999999999999999999999999999999999999999999999999864322         1122   45


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCC
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDL  361 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~  361 (435)
                      |+|+++.|+||+++ +.|  +|.+++.+.
T Consensus       206 GaDivv~S~tK~lg-g~G~~i~G~vv~~~  233 (436)
T PRK07812        206 GADIVVHSATKYLG-GHGTAIAGVIVDGG  233 (436)
T ss_pred             CCCEEEEecccccC-CCCCeEEEEEEcCC
Confidence            89999999999964 444  455555443

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.72  E-value=1.7e-16  Score=157.32  Aligned_cols=205  Identities=14%  Similarity=0.035  Sum_probs=140.7

Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEecCC
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRLTS  256 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~~~  256 (435)
                      ++.++.+-+.+   ..+++++|++|+..++.++.++||.        |+++++.|.++..    .++.+|+++..++.+ 
T Consensus        70 e~~la~le~~~---~~v~~sSG~aAi~~~l~all~~GD~--------Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-  137 (395)
T PRK05967         70 CKAIDALEGSA---GTILVPSGLAAVTVPFLGFLSPGDH--------ALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-  137 (395)
T ss_pred             HHHHHHHhCCC---CEEEECcHHHHHHHHHHHhcCCCCE--------EEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-
Confidence            33444554432   3466666899999999999888887        9999999999764    457789999888643 


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                          +.+.++++++++|++|++++|+||++.+.|+++|+++|+++|+++++|++|+..+.            ......|+
T Consensus       138 ----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~------------~~pl~~Ga  201 (395)
T PRK05967        138 ----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY------------FRPLDFGV  201 (395)
T ss_pred             ----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee------------cChhHcCC
Confidence                35779999999999999999999999999999999999999999999999975432            22333599


Q ss_pred             cEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                      |++..|..||..|-.+  .|+ ++.+++..+........ .|.          -  .....+|..+  -|.+.+.-|+++
T Consensus       202 Divv~S~tKy~~Gh~d~~~G~-v~~~~~~~~~l~~~~~~-~G~----------~--~~p~da~l~~--rgl~Tl~lR~~~  265 (395)
T PRK05967        202 DISIHAATKYPSGHSDILLGT-VSANEKCWPQLLEAHGT-LGL----------C--AGPDDTYQIL--RGLRTMGIRLEH  265 (395)
T ss_pred             CEEEEecccccCCCCCeeEEE-EEcCHHHHHHHHHHHHH-cCC----------C--CCHHHHHHHH--cCcccHHHHHHH
Confidence            9999999999544322  355 44444432221111111 111          1  1112566444  445566666666


Q ss_pred             HHHHHHHH---HHhcCCc
Q psy10210        415 YHFNYKSC---LQNLSDL  429 (435)
Q Consensus       415 ~~~~~~~~---~~~l~~l  429 (435)
                      ..+.+...   +++-+.+
T Consensus       266 ~~~na~~lA~~L~~hp~v  283 (395)
T PRK05967        266 HRKSALEIARWLEGRPDV  283 (395)
T ss_pred             HHHHHHHHHHHHHhCCCC
Confidence            66665444   4444555

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.71  E-value=1.2e-15  Score=153.23  Aligned_cols=250  Identities=18%  Similarity=0.067  Sum_probs=162.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+....+..      ...+...++.+.++++.+.   +.++++++|+||+..|++.++......+|.
T Consensus        57 ~~p~v~~ai~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~---~~~~~~~SGseA~e~Alk~a~~~~~~~~g~  127 (396)
T PRK04073         57 RHPKIIQALKDQADKVTLTSRA------FHSDQLGPWYEKVAKLTGK---DMVLPMNTGAEAVETAIKAARRWAYDVKGV  127 (396)
T ss_pred             CCHHHHHHHHHHHhhccccccc------cCCHHHHHHHHHHHhcCCC---CeEEEcCChHHHHHHHHHHHHHHhhhccCC
Confidence            4899999999998874332211      1223445566777777653   378999999999999999998763322232


Q ss_pred             --CCCeEEEeCCCchhHH-HHHHHcCCE------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210        224 --SLPEIVLPTTAHPAFD-KAANYFGMK------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       224 --~~~~viv~~~~~~~~~-~~~~~~g~~------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~  288 (435)
                        .+.+|+..+.+|++.. .+....+..            +..+|.     .|++++++++++++++|+++.++||+|.+
T Consensus       128 ~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~viiep~~~~~G~~  202 (396)
T PRK04073        128 EPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAITPNTAAFLVEPIQGEAGIN  202 (396)
T ss_pred             CCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcccCeEEEEEcCccCCCCCc
Confidence              2456888877777643 333332211            222332     27899999998899999999999999998


Q ss_pred             cC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCcc
Q psy10210        289 DD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKY  363 (435)
Q Consensus       289 ~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~  363 (435)
                      -+    +++|.++|++||+++|+||+|.++...     |.. ..++......|+++++  |...++ ..+|+++.+ +++
T Consensus       203 ~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~-----g~~-~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~~~~-~~i  273 (396)
T PRK04073        203 IPPEGFLKAARELCKEENVLFIADEIQTGLGRT-----GKL-FACDWDNVTPDMYILG--KALGGGVFPISCVAAN-RDI  273 (396)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC-----cHH-HHhhhcCCCCCEEEec--ccccCCCCcceEEEEc-HHH
Confidence            33    899999999999999999999976331     110 0112222235777764  874443 567886554 454


Q ss_pred             ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+..   .....+.+     ..+  +....+++.++|+.+..+++.++.++..+.+.+.++++
T Consensus       274 ~~~~---~~~~~~~t-----~~~--~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l  326 (396)
T PRK04073        274 LGVF---TPGSHGST-----FGG--NPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI  326 (396)
T ss_pred             Hhhh---cCCCCCCC-----CCC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence            4331   11112222     222  22233566677877767788888888888888877765

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.71  E-value=7.5e-16  Score=154.36  Aligned_cols=150  Identities=15%  Similarity=0.136  Sum_probs=122.6

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g  246 (435)
                      |.+..+|+    .++++.|..   ..+.+++|+.|+.+++.++..+||.        ||++.+.|.+....    +..+|
T Consensus        61 Ptv~~lE~----~la~leg~~---~av~~~SG~aAi~~al~all~~GD~--------VI~~~~~Y~~T~~~~~~~l~~~G  125 (432)
T PRK06702         61 PTLAAFEQ----KLAELEGGV---GAVATASGQAAIMLAVLNICSSGDH--------LLCSSTVYGGTFNLFGVSLRKLG  125 (432)
T ss_pred             cHHHHHHH----HHHHHhCCC---cEEEECCHHHHHHHHHHHhcCCCCE--------EEECCCchHHHHHHHHHHHHHCC
Confidence            44555444    566667664   4688999999999999998877776        99999999875555    67789


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      +++..+..    .+|+++++++|+++|++|++++|+||++.+.|+++|.++|+++|+++++|++++...+          
T Consensus       126 i~v~~vd~----~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~----------  191 (432)
T PRK06702        126 IDVTFFNP----NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL----------  191 (432)
T ss_pred             CEEEEECC----CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh----------
Confidence            99988853    3689999999999999999999999999999999999999999999999999752211          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccC
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPK  351 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~  351 (435)
                        ......|+|+++.|..||..|..
T Consensus       192 --~~pl~~GADIvv~S~TKy~~Ghs  214 (432)
T PRK06702        192 --CQAFEHGANIIVHSTTKYIDGHA  214 (432)
T ss_pred             --CChhhcCCCEEEEccccccCCCc
Confidence              22335589999999999976653

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.71  E-value=4.1e-16  Score=157.03  Aligned_cols=154  Identities=19%  Similarity=0.184  Sum_probs=119.2

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----cCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~  254 (435)
                      ++.+.++++.|..   ..+++++|++|+.+++.++.++++.        |+++.+.|.+....+..    .|+++..++.
T Consensus        62 ~Le~~lA~l~g~~---~~l~~ssG~~Ai~~al~al~~~Gd~--------Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~  130 (425)
T PRK06084         62 VLEQRVAALEGGV---GALAVASGMAAITYAIQTIAEAGDN--------IVSVAKLYGGTYNLLAHTLPRIGIETRFAAH  130 (425)
T ss_pred             HHHHHHHHHhCCC---ceeEehhHHHHHHHHHHHHhCCCCE--------EEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence            3455677777753   4578889999999999999877776        99999998865544432    4666666653


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           .|++++++++++++++|++++|+||+|.+.++++|.++|++||+++++|++++....         ..++   ..
T Consensus       131 -----~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~---------~~p~---~~  193 (425)
T PRK06084        131 -----DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL---------CRPF---EH  193 (425)
T ss_pred             -----CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---------CChh---hc
Confidence                 489999999999999999999999999999999999999999999999999974322         1122   34


Q ss_pred             CccEEEecCCCCCCccC-CcEEEEEeC
Q psy10210        335 GVTSISVDTHKYGFTPK-GSSVVLYRD  360 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~-g~g~il~~~  360 (435)
                      |+|+++.|++||+.++. ..|.+++.+
T Consensus       194 gaDivv~S~tK~l~G~g~~~gG~v~~~  220 (425)
T PRK06084        194 GADIVVHSLTKYIGGHGTSIGGIVVDS  220 (425)
T ss_pred             CCCEEEECchhcccccccceeEEEEeC
Confidence            79999999999976552 234445543

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.71  E-value=2.1e-15  Score=152.03  Aligned_cols=196  Identities=18%  Similarity=0.233  Sum_probs=138.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcC-hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIF-PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+++.+++.+++..+.  | +.++.. .........+++.+++++|++.   .+++++|+.|+.+++.+ ..++++    
T Consensus        94 ~~~vieAv~~~~~~y~--~-l~~~l~~g~~g~r~~~le~~lA~l~gae~---alvv~sg~aAi~l~l~~-l~~Gde----  162 (454)
T TIGR00474        94 AEEAIEAVTDAARGYS--N-LEYDLETGKRGSRYSHVEGLLCELTGAED---ALVVNNNAAAVLLALNT-LAKGKE----  162 (454)
T ss_pred             CHHHHHHHHHHHhccc--c-hhccccccccchHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHH-hCCcCE----
Confidence            5778888888877542  2 222211 1122335678889999999864   35677889999988855 344544    


Q ss_pred             CCCeEEEeCCCchh------HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCc--cc--ccCHHH
Q psy10210        224 SLPEIVLPTTAHPA------FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPY--GT--MDDIGA  293 (435)
Q Consensus       224 ~~~~viv~~~~~~~------~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~npt--G~--~~~i~~  293 (435)
                          ||+++..|..      +...++..|++++.++.+  ...|+++++++++++|++|++++++|++  |.  +.|+++
T Consensus       163 ----VIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~  236 (454)
T TIGR00474       163 ----VIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAE  236 (454)
T ss_pred             ----EEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHH
Confidence                9999877642      344667789999998764  2358999999999999999999999985  64  679999


Q ss_pred             HHHHHHHcCCcEEEeccccchhhhcccccCCCCCC--CCCCCCCccEEEecCCCCCCccCCcEEEEEeC
Q psy10210        294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP--FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD  360 (435)
Q Consensus       294 i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~--~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~  360 (435)
                      |+++|++||+++++|.+.|.+ .+. ...|.+..|  .+....|+|++++|+|||++||. .|+++.++
T Consensus       237 I~~la~~~g~~vivD~~sG~l-~~~-~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~  302 (454)
T TIGR00474       237 LVALGREHGLPVMEDLGSGSL-VDL-SRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKK  302 (454)
T ss_pred             HHHHHHHcCCeEEEECCCccc-ccc-hhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECH
Confidence            999999999999999864432 110 001222222  24556799999999999977775 67766554

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.71  E-value=1.9e-15  Score=151.16  Aligned_cols=251  Identities=16%  Similarity=0.059  Sum_probs=167.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.++..+....+.      ....+.+.++.+.+++..+.   +.++++++|+||+..|++.++..... ++.
T Consensus        53 ~~p~v~~a~~~q~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~f~~SGseA~e~Aik~ar~~~~~-~~~  122 (395)
T PRK03715         53 CNPGMVEALAAQAEKLINPSP------AFYNEPMAKLAGLLTQHSCF---DKVFFANSGAEANEGAIKLARKWGRK-HKN  122 (395)
T ss_pred             CCHHHHHHHHHHHHhcccccc------cccCHHHHHHHHHHhhccCC---CEEEEeCCcHHHHHHHHHHHHHHhhc-cCC
Confidence            389999999998876432221      12346667777777766432   37999999999999999999866432 222


Q ss_pred             CCCeEEEeCCCchhH-HHHHHHcCCEEE---EEecCCCc----cccHHHHHHHhhcCceEEEEeCCCCCcccccC----H
Q psy10210        224 SLPEIVLPTTAHPAF-DKAANYFGMKVK---HIRLTSSY----TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD----I  291 (435)
Q Consensus       224 ~~~~viv~~~~~~~~-~~~~~~~g~~v~---~vp~~~~~----~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~----i  291 (435)
                      .+++|+..+..|++. ..++...|....   ..|....+    ..|++++++.+.+++++|+++..++..|.+.+    +
T Consensus       123 ~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l  202 (395)
T PRK03715        123 GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFM  202 (395)
T ss_pred             CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHH
Confidence            345688888777764 344443342211   11111111    24789999999888999999988888888754    9


Q ss_pred             HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210        292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF  369 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~  369 (435)
                      ++|.++|++||+++|+||+++||-.     .|.   .+.+...  ..|+++++  |.+.++.++|.++.++ ++..    
T Consensus       203 ~~l~~l~~~~~~llI~DEv~tG~GR-----tG~---~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~-~i~~----  267 (395)
T PRK03715        203 QQLRALTKQHGLLLIVDEVQTGCGR-----TGT---LFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKA-EVAV----  267 (395)
T ss_pred             HHHHHHHHHcCCEEEEeccccCCCC-----Ccc---hhhHhhcCCCCceeeeh--hhhhCCcceEEEEEcc-cccc----
Confidence            9999999999999999999997522     232   2222222  24887775  7655546678876655 4421    


Q ss_pred             ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+...+++|     .+.  ....+++.++++.+.++++.++++++.+.+++.++++
T Consensus       268 ~~~~~~~~T~-----~g~--pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l  317 (395)
T PRK03715        268 FEAGDQGGTY-----NGN--PLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLEL  317 (395)
T ss_pred             ccCCCcCCCC-----CCC--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            1222233332     232  3345788899999988889999999999988887765

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.70  E-value=6.2e-16  Score=151.42  Aligned_cols=157  Identities=12%  Similarity=-0.010  Sum_probs=113.8

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++.++.   +++++|+|+++++.+++.  ..+++.        |++++|+|+.+...++..|++++.+|++   
T Consensus        53 ~Lr~~ia~~~~~---~~I~it~Gs~~al~~~~~--~~~gd~--------v~v~~P~y~~~~~~~~~~g~~~~~v~~~---  116 (330)
T PRK05664         53 GLEAAARAYYGA---PQLLPVAGSQAAIQALPR--LRAPGR--------VGVLSPCYAEHAHAWRRAGHQVRELDEA---  116 (330)
T ss_pred             HHHHHHHHHhCC---CCEEECcCHHHHHHHHHH--ccCCCE--------EEEcCCChHHHHHHHHHcCCeEEEechh---
Confidence            344555555543   389999999999998864  245554        9999999999999999999999999863   


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                           ++++++ ++++++++++||||||.+   +++++|+++|+++++++++||+|..+..      ..  ....+....
T Consensus       117 -----~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~------~~--s~~~~~~~~  182 (330)
T PRK05664        117 -----EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP------QH--SLAACAHRP  182 (330)
T ss_pred             -----hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC------cc--cccccccCC
Confidence                 344555 367889999999999999   5678888888999999999999976531      00  111211111


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      -.+++.|++|..+ +...+|+++. ++++.+.
T Consensus       183 ~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~  213 (330)
T PRK05664        183 GLIVLRSFGKFFGLAGARLGFVLA-EPALLRA  213 (330)
T ss_pred             CEEEEeeccccccCCCcceEEEEe-CHHHHHH
Confidence            2366778999853 4577899665 4555543

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.70  E-value=2e-15  Score=151.52  Aligned_cols=249  Identities=16%  Similarity=0.049  Sum_probs=163.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.......      ...+...++.+.++++++.   +.++++++|+||+..|++.++.....+.+.
T Consensus        52 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~la~~L~~~~~~---~~~~f~~SGseA~e~Alk~ar~~~~~~~~~  122 (397)
T TIGR03246        52 AHPELVKALIEQADKLWHIGNG------YTNEPVLRLAKKLVDATFA---DKVFFCNSGAEANEAALKLARRYALDKHGA  122 (397)
T ss_pred             CCHHHHHHHHHHHHhcccccCc------cCCHHHHHHHHHHHhhCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence            4899999999998863221110      1134456677778887753   378999999999999999998764332233


Q ss_pred             CCCeEEEeCCCchhHHHH-HHHcCC------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210        224 SLPEIVLPTTAHPAFDKA-ANYFGM------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM--  288 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~-~~~~g~------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~--  288 (435)
                      .+++|+..+..|++.... ....+.            .+..+|.     .|++++++++.+++++|+++.++++.|.+  
T Consensus       123 ~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~  197 (397)
T TIGR03246       123 DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALISDKTCAVIVEPIQGEGGVVPA  197 (397)
T ss_pred             CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhccCeEEEEEecccCCCCCcCC
Confidence            456788888777775333 333232            1222322     37899999998889999999877777754  


Q ss_pred             --cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        289 --DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       289 --~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                        +++++|.++|++||+++|+||+|.|+..     .|.   .+.....|  +|++++  .|.+.+...+|+++.++ ++.
T Consensus       198 ~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr-----~G~---~~a~~~~gv~pDi~t~--~K~lggG~pigav~~~~-~i~  266 (397)
T TIGR03246       198 DPAFLKGLRELCDRHNALLIFDEVQTGVGR-----TGE---LYAYMHYGVTPDILTS--AKALGGGFPIGAMLTTT-EIA  266 (397)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEechhhcCCc-----ccc---chhhhhcCCCCCEEEe--ehhhhCCcceeEEEEcH-HHH
Confidence              6699999999999999999999987732     121   11212222  477765  48754446678866654 443


Q ss_pred             cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +..   .....+.+|     .+  +....+++.+++..+..+++.+++++..+++.+.++++.
T Consensus       267 ~~~---~~~~~~~t~-----~~--~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~  319 (397)
T TIGR03246       267 AHL---KVGTHGTTY-----GG--NPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKIN  319 (397)
T ss_pred             Hhc---cCCCcCCCC-----CC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            321   111122222     22  222346777888888777888888888888888777653

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.70  E-value=1.8e-14  Score=138.16  Aligned_cols=326  Identities=17%  Similarity=0.178  Sum_probs=213.5

Q ss_pred             hhhchhhHHHHHHHHHHHH----HHHHh-hhhhcCCCC-ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCccccccc
Q psy10210         69 ARKIPAVRKKLEEETGKVA----KLFQD-DIKQNNAGL-EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVY  142 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~----~~~~~-~~~~~~~~~-~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  142 (435)
                      -+..|.. ....++|+.+.    +++.. .++++.... .-...+|. ++++.++++++++...++. .+ ..+.+.+.|
T Consensus        10 rh~~P~~-~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~~~-~~sE~e~l~~l~~ia~kN~-~~-~sfiG~GyY   85 (450)
T COG0403          10 RHIGPSS-ADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPLPK-PLSEYEALAELKEIASKNK-VF-TSFIGAGYY   85 (450)
T ss_pred             cCCCCCh-HHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCCCC-CCCHHHHHHHHHHHHhcCc-hh-hhhccCccc
Confidence            3456766 66777777654    44544 444432211 00112333 3799999999999988765 22 223333333


Q ss_pred             C-ChHhHHH-HHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210        143 Y-YQQDLVD-LLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE  220 (435)
Q Consensus       143 ~-g~~~l~~-~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~  220 (435)
                      . ..|.+.. .+.+.-+-+....|++|+.+++..+...+...++++++|.+-. +-.+-.++|.+-+.++.+.+..+.+ 
T Consensus        86 ~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA-NASm~DeaTAaAEAm~ma~r~~k~k-  163 (450)
T COG0403          86 DTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA-NASMLDEATAAAEAMLMAKRVTKKK-  163 (450)
T ss_pred             CCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc-cchhhhhHHHHHHHHHHHHHhhcCc-
Confidence            2 2455544 5543322222335999999999999999999999999999875 7788899998888888877654422 


Q ss_pred             cCCCCCeEEEeCCCchhHHHHHHHc----CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcc-cccCHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPAFDKAANYF----GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYG-TMDDIGAIA  295 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~~~~~~~~~----g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG-~~~~i~~i~  295 (435)
                          +.+++++...|+......+..    |.+++.++.+     |+++++++.+.++.++++.+|++ .| ...++++|.
T Consensus       164 ----~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d~~~l~  233 (450)
T COG0403         164 ----RNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESADDGDVFGVLVQYPNT-FGIVEEDLRALI  233 (450)
T ss_pred             ----CceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhccccCeEEEEEecCCC-CCccchhHHHHH
Confidence                456999999999987776653    6777777754     78888888335899999999997 77 558899999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCCcccccccccc
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDLKYKHCQYFVT  371 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~~~~~~~~~~~  371 (435)
                      +.++++|.++++=.---.+.+        -.+|   ...|+|+.+.+++-+|    +|++.+|++.++++-.++     .
T Consensus       234 ~~~h~~~al~~v~aDplaL~L--------L~pP---Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~-----m  297 (450)
T COG0403         234 EAAHSAGALVIVAADPLALGL--------LKPP---GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQ-----M  297 (450)
T ss_pred             HHHhhcCCEEEEEechhHhhc--------cCCc---cccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhc-----C
Confidence            999999998876432211111        1122   3458999999999885    333447887777654332     2


Q ss_pred             CCCCCCCCCCCccccCCCc-----------------------hHHH--HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        372 SDWPGGNYGSPSVSGSRSG-----------------------GIIA--TCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       372 ~~~~gg~~~~~~~~gsr~~-----------------------~~ia--~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      |...-|.  +..-.|.|..                       .++.  .+-..+.++|.+|+++..+++.+.+..+.++|
T Consensus       298 PGRlVG~--S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L  375 (450)
T COG0403         298 PGRLVGV--SVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGL  375 (450)
T ss_pred             CCceeee--eecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            3332221  1111122111                       1111  12223567899999999999999888888877


Q ss_pred             CC
Q psy10210        427 SD  428 (435)
Q Consensus       427 ~~  428 (435)
                      .+
T Consensus       376 ~~  377 (450)
T COG0403         376 KE  377 (450)
T ss_pred             hh
Confidence            73

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.70  E-value=2.3e-15  Score=149.72  Aligned_cols=198  Identities=14%  Similarity=0.083  Sum_probs=132.6

Q ss_pred             ccCChHhHHHHHHHHHHhhcC------CCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        141 VYYYQQDLVDLLTEVFGLTSY------TNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       141 ~~~g~~~l~~~i~~~~~~~~~------~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      .+.-+|++.+++.+.+..+..      ..........+..+...++++.+++++|.+.  .+++++| +.++...+..+.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG-~~a~~~~~~~~~   92 (370)
T PRK05937         16 GFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSG-YMANLGLCAHLS   92 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECCh-HHHHHHHHHHhC
Confidence            334478889988888877631      2222333344567888999999999999853  4555555 566654444332


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh------cCceEEEEeCCCCCcccc
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT------GNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~------~~~~~v~~~~p~nptG~~  288 (435)
                      .++        +.|++....|.+...+++......+.++     ..|+++++++++      +++.+|++++++|++|.+
T Consensus        93 ~~~--------d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i  159 (370)
T PRK05937         93 SVT--------DYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTL  159 (370)
T ss_pred             CCC--------CEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCc
Confidence            233        3477778899998888877643333333     368999999886      346678889999999999


Q ss_pred             cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeC
Q psy10210        289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD  360 (435)
Q Consensus       289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~  360 (435)
                      .|+++|.++|+++|+++|+|++|+.+.++..   +.+. .........+.+..+++|. +||.|+++ ++.+
T Consensus       160 ~pl~eI~~l~~~~~~~livDea~~~G~~g~~---g~g~-~~~~~~~~~~~~~~tlsK~-~g~~G~~v-l~~~  225 (370)
T PRK05937        160 APLEQIIALSKKYHAHLIVDEAHAMGIFGDD---GKGF-CHSLGYENFYAVLVTYSKA-LGSMGAAL-LSSS  225 (370)
T ss_pred             cCHHHHHHHHHHcCCEEEEECCccccccCCC---CCch-HHhhCCCCCcEEEEechhh-hhcCceEE-EcCH
Confidence            9999999999999999999999986544211   1100 0001111223456677798 68888776 4443

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.69  E-value=2.6e-15  Score=150.95  Aligned_cols=255  Identities=16%  Similarity=0.058  Sum_probs=161.3

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+.......+.    +  ..+...++.+.++++++.   +.++++++|++|+..+++.++..+..++|.
T Consensus        48 ~~p~v~~a~~~~~~~~~~~~~~----~--~~~~~~~~~~~l~~~~~~---~~~~~~~SGs~A~e~al~~~~~~~~~~~~~  118 (400)
T PTZ00125         48 CHPKILAALINQAQKLTLTSRA----F--YNDVLGLAEKYITDLFGY---DKVLPMNSGAEAGETALKFARKWGYEVKGI  118 (400)
T ss_pred             CCHHHHHHHHHHHHhccccccc----c--cCHHHHHHHHHHHhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence            4899999999988764332211    1  123556777777887765   268899999999999999988665444454


Q ss_pred             --CCCeEEEeCCCchhHHHH-HHHcCCEEE---EEecCCC----ccccHHHHHHHhh-cCceEEEEeCCCCCcccccC--
Q psy10210        224 --SLPEIVLPTTAHPAFDKA-ANYFGMKVK---HIRLTSS----YTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDD--  290 (435)
Q Consensus       224 --~~~~viv~~~~~~~~~~~-~~~~g~~v~---~vp~~~~----~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~--  290 (435)
                        .+..|++.+.+|++.... ....+....   ..|..++    ...|++++++++. +++++|+++.++||+|.+-+  
T Consensus       119 ~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~  198 (400)
T PTZ00125        119 PENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDD  198 (400)
T ss_pred             CCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCH
Confidence              345688888877774333 332221110   0011000    1138999999996 67999999999999999855  


Q ss_pred             --HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccC-CcEEEEEeCCcccccc
Q psy10210        291 --IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQ  367 (435)
Q Consensus       291 --i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~  367 (435)
                        +++|.++|++||+++|+|++|+++...     |.. ...+......|+++++  |.+.++. ++|+++.++ ++.+..
T Consensus       199 ~~l~~l~~l~~~~~~lli~Dev~~g~g~~-----G~~-~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~-~~~~~~  269 (400)
T PTZ00125        199 GYLKQVYELCKKYNVLLIVDEIQTGLGRT-----GKL-LAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND-DVMLVI  269 (400)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccccCCCcc-----chh-hHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH-HHHhhc
Confidence              999999999999999999999875321     110 0111111124777765  8865553 788866655 443321


Q ss_pred             ccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        368 YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       368 ~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                         .....+.+     ..+  +....+++.++++.+..+++.++.+++.+.+.+.++++
T Consensus       270 ---~~~~~~~t-----~~~--~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l  318 (400)
T PTZ00125        270 ---KPGEHGST-----YGG--NPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKEL  318 (400)
T ss_pred             ---cCCCCCCC-----CCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence               11111111     112  22233456667777766677888888877777776654

>PRK07049 methionine gamma-lyase; Validated

Probab=99.69  E-value=1.3e-15  Score=153.57  Aligned_cols=209  Identities=16%  Similarity=0.105  Sum_probs=142.7

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~  254 (435)
                      .+.+.++++.|.+   ++++++||++|+.+++.++.++++.        |++++|.|..+...+    +..|++++.++.
T Consensus        87 ~Le~~lA~leg~~---~~iv~~sG~~Ai~~~l~al~~~Gd~--------Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~  155 (427)
T PRK07049         87 IVEDRLAVYEGAE---SAALFSSGMSAIATTLLAFVRPGDV--------ILHSQPLYGGTETLLAKTFRNFGVGAVGFAD  155 (427)
T ss_pred             HHHHHHHHHhCCC---cEEEEccHHHHHHHHHHHHhCCCCE--------EEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence            3445677777643   5788899999999999999988887        999999999986653    567988777762


Q ss_pred             CCCccccHHHHHHHhh-----cCceEEEEeCCCCCcccccCHHHHHHHHHH------cCCcEEEeccccchhhhcccccC
Q psy10210        255 TSSYTVDLAALQSAIT-----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK------YGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~-----~~~~~v~~~~p~nptG~~~~i~~i~~la~~------~~~~livD~~~~~~~~~~~~~~g  323 (435)
                          ..|++++++++.     +++++|++++|+||||.+-++++|.+++++      +++++++|++|.++...      
T Consensus       156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~------  225 (427)
T PRK07049        156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQ------  225 (427)
T ss_pred             ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccC------
Confidence                146777776664     479999999999999999999999999988      89999999998654321      


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccC--CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHH
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPK--GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM  401 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~--g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~  401 (435)
                         .++   ..|+|+++.|++|+..|..  .+|++ +.++++.+........+ |+            ......+|++++
T Consensus       226 ---~pl---~~g~divv~S~SK~~gG~~glr~G~v-v~~~~l~~~l~~~~~~~-g~------------~ls~~~a~l~~r  285 (427)
T PRK07049        226 ---KPL---EHGADLSVYSLTKYVGGHSDLVAGAV-LGRKALIRQVRALRSAI-GT------------QLDPHSCWMLGR  285 (427)
T ss_pred             ---Ccc---ccCCCEEEEcCceeecCCCCcEEEEE-ECCHHHHHHHHHHHHhc-CC------------CCCHHHHHHHHc
Confidence               123   2368999999999965433  35774 45555544322222222 11            011135676666


Q ss_pred             HhcHHHHHHHHHHHHHH---HHHHHHhcCCcc
Q psy10210        402 YFGFEAQVWICVRYHFN---YKSCLQNLSDLW  430 (435)
Q Consensus       402 ~~g~~g~~~~~~~~~~~---~~~~~~~l~~l~  430 (435)
                      .+.  .+..++++..+.   +.+.+++.+++.
T Consensus       286 ~L~--tl~~R~~~~~~~a~~la~~L~~~p~V~  315 (427)
T PRK07049        286 SLE--TLVLRMERANRNARAVAEFLRDHPKVE  315 (427)
T ss_pred             CCC--hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            653  344455544444   444455555553

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.69  E-value=1.1e-15  Score=150.19  Aligned_cols=160  Identities=14%  Similarity=0.082  Sum_probs=114.5

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      .++++.+++.+|.++.+++++|+|+++++.++.. +.+++ .        |++++|+|+.+...++..|++++.+|.+. 
T Consensus        56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~~~~g-~--------v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-  124 (339)
T PRK06959         56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-LLPRG-R--------VGIAPLAYSEYAPAFARHGHRVVPLDEAA-  124 (339)
T ss_pred             HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-hcCCC-e--------EEEcCCCcHHHHHHHHHCCCEEEeecccc-
Confidence            4677788888888754599999999999986654 33332 2        88999999999999999999999888653 


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           +.    +.+.++++++++||||||.+-   .++++++.|++++.++++||+|..|...    ..  ..... ...
T Consensus       125 -----~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s--~~~~~-~~~  188 (339)
T PRK06959        125 -----DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----AS--LAAHT-DRP  188 (339)
T ss_pred             -----hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----cc--chhcc-CCC
Confidence                 22    223457899999999999994   4555666677889999999999987431    00  00111 112


Q ss_pred             CccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      + .++..|+.|..+ +...+|+++. ++++.+.
T Consensus       189 ~-vi~l~SfSK~~gl~GlRiGy~v~-~~~li~~  219 (339)
T PRK06959        189 G-LVVLRSVGKFFGLAGVRAGFVLA-APALLAA  219 (339)
T ss_pred             C-EEEEecChhhcCCcchheEEEec-CHHHHHH
Confidence            2 366778999743 5577899664 5566544

>KOG0634|consensus

Probab=99.69  E-value=6.2e-16  Score=147.81  Aligned_cols=220  Identities=15%  Similarity=0.153  Sum_probs=151.9

Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc---
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG---  271 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---  271 (435)
                      ++++|+|.|.++..+++.++++++.        |++...+|++.....+..|++++.|++|++| ++++.|++.+..   
T Consensus       126 diiit~G~t~~l~~~l~~~~N~gd~--------vlie~~ty~~AL~s~~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~  196 (472)
T KOG0634|consen  126 DIIITNGNTDGLFKVLRTLINRGDH--------VLIEEYTYPSALQSMEALGVKIIPVKMDQDG-IDPESLEEILSNWKP  196 (472)
T ss_pred             eEEEecCCchHHHHHHHHhhcCCCc--------eEEecccchHHHHhccccCceEEeccccCCC-CCHHHHHHHHhcCCc
Confidence            7999999999999999999999998        9999999999999999999999888888766 899999998853   


Q ss_pred             ------Cc-eEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhh-cccccCCCCCCC-----------
Q psy10210        272 ------NT-VMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAP-FMSAAGYPLPPF-----------  329 (435)
Q Consensus       272 ------~~-~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~-~~~~~g~~~~~~-----------  329 (435)
                            ++ .+..+..++||||..   +..++|.+||++|++++++|+.|.-+-.. +........+.+           
T Consensus       197 ~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~  276 (472)
T KOG0634|consen  197 GSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVP  276 (472)
T ss_pred             ccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcC
Confidence                  23 456677899999988   67889999999999999999999643221 000000011111           


Q ss_pred             ---CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        330 ---DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       330 ---d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                         +....|-.+=.-|+.|....+...|+ +..++.++++....      +.   .+..+ .++..-...++.++.+|.+
T Consensus       277 sflslDtdGrVIr~dSFSKiiaPGlRlG~-it~~~~~l~ril~~------ae---~~t~~-pSg~sq~iv~a~l~~wgqe  345 (472)
T KOG0634|consen  277 SFLSLDTDGRVIRNDSFSKIIAPGLRLGW-ITGNSLFLKRILDL------AE---VATSG-PSGFSQGIVYAMLKRWGQE  345 (472)
T ss_pred             CcccccccccEEeccchhhhhcCcceeEE-eecCHHHHHHHhhh------cc---eeecC-cccccHHHHHHHHHHHHHH
Confidence               11122222223357898533377899 55555444332111      00   11111 3333334678899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHh-cCCcccccC
Q psy10210        407 AQVWICVRYHFNYKSCLQN-LSDLWLYLP  434 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~-l~~l~~~~p  434 (435)
                      ||.+++.++...+..+... +..+..|+|
T Consensus       346 G~~~wi~~l~~~Yt~Rrn~~l~Al~kylp  374 (472)
T KOG0634|consen  346 GFLRWIQHLRSSYTERRNALLSALDKYLP  374 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999988776655442 344444444

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.69  E-value=4.9e-16  Score=153.71  Aligned_cols=195  Identities=12%  Similarity=-0.009  Sum_probs=136.2

Q ss_pred             CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEc-CChHHHHHHHHHHH
Q psy10210        135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMT-SGGTESIMMACKAY  213 (435)
Q Consensus       135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t-~ggteai~~a~~a~  213 (435)
                      +.+.-++..-++++++++.....    .-....+..+.+.++..++++.+++++|.+++.+++++ +|||.++++++.++
T Consensus         5 ~~f~pGP~~~~~~v~~a~~~~~~----~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l   80 (361)
T TIGR01366         5 GRFGSGPSKVRLEQLQALTTTAA----SLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL   80 (361)
T ss_pred             CcccCCCcCCCHHHHHHHHhcCc----cccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence            34444455556666666542210    01112356788899999999999999998655567775 66999999999888


Q ss_pred             HHHhhhhcCCCCCeEEEeCCCchh-HHHHHHHc--CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC
Q psy10210        214 RDYAREEKGISLPEIVLPTTAHPA-FDKAANYF--GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD  290 (435)
Q Consensus       214 ~~~~~~~~g~~~~~viv~~~~~~~-~~~~~~~~--g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~  290 (435)
                      ... +.        +++..-.|.. +.+.+...  +.++..++.+.+..++.     .+++++++|++++.+|.||.+.|
T Consensus        81 ~~~-~~--------l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lV~~~h~et~tG~~~p  146 (361)
T TIGR01366        81 IEK-KS--------LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QADPGVDVIAWAHNETSTGVAVP  146 (361)
T ss_pred             ccc-cc--------cEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccCCCCCEEEEcccCCccceecc
Confidence            521 11        4555555654 44455542  23677777654333333     35678999999999999999999


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                      +++|   ++++|+++++|++++.+           +.++|+..  +|++++++||++++|.|.++++++++.+
T Consensus       147 i~~I---~~~~g~~~iVDavqs~g-----------~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~  203 (361)
T TIGR01366       147 VRRP---EGSDDALVVIDATSGAG-----------GLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAAL  203 (361)
T ss_pred             cccc---cccCCCeEEEEcCcccc-----------CCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHH
Confidence            9887   58899999999998543           34677653  8999999999976667777766666543

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.69  E-value=2.7e-15  Score=151.68  Aligned_cols=171  Identities=15%  Similarity=0.167  Sum_probs=125.5

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~  257 (435)
                      +++.+++++|.+   .+++++|||+|+.+++.++........++ ++++||+++++|+++..++...|++++.++++ .+
T Consensus        68 fe~~lA~~~g~~---~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~  144 (438)
T PRK15407         68 FEKKLAEFLGVR---YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPT  144 (438)
T ss_pred             HHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence            444556666653   57899999999999999874221111121 24569999999999999999999999999997 67


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      +.+|+++++++++++|++|+++++   +|...++++|.++|++||+++|+|++++-+...-.+..|    .+    ..+.
T Consensus       145 ~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G----~~----gd~~  213 (438)
T PRK15407        145 YNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTG----TF----GDIA  213 (438)
T ss_pred             CCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeee----cc----CceE
Confidence            889999999999999999998874   677889999999999999999999999766442111111    11    1123


Q ss_pred             EEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        338 SISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       338 ~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      ++++...|.+....| |+++++++++.+
T Consensus       214 ~fSf~~~k~~~~geG-G~l~t~d~~l~~  240 (438)
T PRK15407        214 TLSFYPAHHITMGEG-GAVFTNDPLLKK  240 (438)
T ss_pred             EEeCCCCCCccccCc-eEEEECCHHHHH
Confidence            444445565444445 888888887754

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.68  E-value=2.7e-15  Score=135.11  Aligned_cols=195  Identities=18%  Similarity=0.178  Sum_probs=152.0

Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTV  260 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~  260 (435)
                      .+++++|++   ++-+|.|+.++-+.++.+++.++|.        |++...+|++..-+|+..|+++..||-.  +++.+
T Consensus        69 dlaeFlg~D---~~R~t~GARe~KfavMhal~~~gd~--------vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i  137 (382)
T COG1103          69 DLAEFLGMD---EVRVTAGAREAKFAVMHALCKEGDW--------VVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKI  137 (382)
T ss_pred             HHHHHhCCc---eeeecccchhhHHHHHHHhccCCCE--------EEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEe
Confidence            477888885   6799999999999999999999988        9999999999999999999999999964  67889


Q ss_pred             cHHHHHHHhhc-------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        261 DLAALQSAITG-------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       261 d~~~l~~~i~~-------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      +++...+.|.+       .+.+.+++++....|.+.|.+.++++|++||++++..++|.-+..           |.....
T Consensus       138 ~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm-----------pvs~ke  206 (382)
T COG1103         138 TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM-----------PVSGKE  206 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc-----------cccccc
Confidence            99988877752       478899999999999999999999999999999999999965433           778888


Q ss_pred             CCccEEEecCCCCCCccCCcEEEEEeCCcccccccccc-CCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        334 PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVT-SDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~-~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      .|+|+++.|+||.+-+..++|++.++ .++....+..+ ..|.-..  .--+.|+-.|+.+....|++-.
T Consensus       207 ~g~DFiVgSGHKsmAAs~PiGvl~~~-eE~ae~V~r~Sg~~~~~KE--vellGCT~rGapivTlmASfP~  273 (382)
T COG1103         207 IGADFIVGSGHKSMAASAPIGVLAMS-EEWAEIVLRRSGRAFPKKE--VELLGCTVRGAPIVTLMASFPH  273 (382)
T ss_pred             cCCCEEEecCccchhccCCeeEEeeh-hHHHHHHHhhcccccccce--eeeecccccCchHHHHHhcCHH
Confidence            99999999999997666778885555 44443322211 1121110  1123466666666566555433

>PRK07505 hypothetical protein; Provisional

Probab=99.68  E-value=4.1e-15  Score=149.64  Aligned_cols=250  Identities=14%  Similarity=0.100  Sum_probs=153.2

Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      +++|++.+++.+.+.++...++..... ....+...++++.++++++.    ..+++++|++|+..+++.+.... . .+
T Consensus        60 ~~~p~v~~A~~~~l~~~g~~~~~~~~~-~~~~~~~~~l~~~la~~~~~----~~~~~~sG~~a~~~ai~~~~~~~-~-~~  132 (402)
T PRK07505         60 DTHPAIIEGAVDALKRTGSLHLSSSRT-RVRSQILKDLEEALSELFGA----SVLTFTSCSAAHLGILPLLASGH-L-TG  132 (402)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCCccch-hhhhHHHHHHHHHHHHHhCC----CEEEECChHHHHHHHHHHHHhcc-c-CC
Confidence            449999999999998753222222111 23466788899999999976    34555566889998888764311 0 00


Q ss_pred             CCCCeEEEeC-CCchhHHH--HHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        223 ISLPEIVLPT-TAHPAFDK--AANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       223 ~~~~~viv~~-~~~~~~~~--~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                       .++.+++.+ ..|.++..  .....+.+++.+|.     .|+++++++++++++++++++|+||+|.+.++++|.++|+
T Consensus       133 -~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~  206 (402)
T PRK07505        133 -GVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQE  206 (402)
T ss_pred             -CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHH
Confidence             122365555 45555432  22223567777775     3889999999878899999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCC--CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPL--PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~--~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      +||+++|+||+|+...+   ...|.+.  ..+....+...+++.++.|.. ++.| |+++..++++.+........|   
T Consensus       207 ~~~~~li~DEa~~~~~~---g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~-~~~G-g~~~~~~~~~~~~~~~~~~~~---  278 (402)
T PRK07505        207 KYGLFLYIDDAHGLSIY---GKNGEGYVRSELDYRLNERTIIAASLGKAF-GASG-GVIMLGDAEQIELILRYAGPL---  278 (402)
T ss_pred             HcCCEEEEECcccccCc---CCCCCchHHHHcCCCCCCCeEEEEechhhh-hccC-eEEEeCCHHHHHHHHHhCCCc---
Confidence            99999999999853221   1111110  011111233456677888974 4334 676656665544321111221   


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFN  418 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~  418 (435)
                           +..++.+...++++.+++..+..+.+.+..+++.+.
T Consensus       279 -----t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~  314 (402)
T PRK07505        279 -----AFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNN  314 (402)
T ss_pred             -----eeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence                 223344444556677777766555554444444333

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.68  E-value=3.8e-15  Score=150.31  Aligned_cols=267  Identities=15%  Similarity=0.070  Sum_probs=168.7

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...++++.   +++|++.+++.+++.+......     .....+.+.++.+.+++++.......++++++|+|
T Consensus        38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGse  112 (421)
T PRK09792         38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY-----QIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAE  112 (421)
T ss_pred             CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc-----CccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHH
Confidence            444454443332222   3589999999999887432211     11234555677778888774322247899999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCC--Cc---cccHHHH
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTS--SY---TVDLAAL  265 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~--~~---~~d~~~l  265 (435)
                      |++.|++.++....      +++|+....+|++....+... +.             .+..+|...  .+   .-+++.+
T Consensus       113 A~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l  186 (421)
T PRK09792        113 AVENAVKIARAHTG------RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAI  186 (421)
T ss_pred             HHHHHHHHHHHhcC------CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHH
Confidence            99999999986522      456888888888854333221 21             133344321  11   0135778


Q ss_pred             HHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--
Q psy10210        266 QSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--  334 (435)
Q Consensus       266 ~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--  334 (435)
                      ++.+.     +++++|+++..++++|..    +.+++|.++|++||+++|+||++++|..     .|.   .+.+...  
T Consensus       187 ~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr-----~G~---~~a~~~~~~  258 (421)
T PRK09792        187 ERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFAR-----TGK---LFAMDHYAD  258 (421)
T ss_pred             HHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC-----CCc---hhHHHhcCC
Confidence            88775     357899999889999975    4499999999999999999999998733     121   2222222  


Q ss_pred             CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                      ..|++++  .|.+.+...+|+++.+ +++.+..   .....+++|+     +  +....+++.++++.+..+++.+++++
T Consensus       259 ~pDi~t~--gK~l~~G~pigav~~~-~~i~~~~---~~~~~~~T~~-----g--npl~~aaa~a~l~~l~~~~~~~~~~~  325 (421)
T PRK09792        259 KPDLMTM--AKSLAGGMPLSGVVGN-ANIMDAP---APGGLGGTYA-----G--NPLAVAAAHAVLNIIDKESLCERANQ  325 (421)
T ss_pred             CCcEEEe--ehhhcCCCceEEEEEc-HHHHhcc---CCCCcCCCCC-----C--CHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            2476555  4886555778886654 4443321   1122233322     2  22233677788888888888888888


Q ss_pred             HHHHHHHHHHhc
Q psy10210        415 YHFNYKSCLQNL  426 (435)
Q Consensus       415 ~~~~~~~~~~~l  426 (435)
                      ..+++++.++.+
T Consensus       326 ~g~~l~~~l~~l  337 (421)
T PRK09792        326 LGQRLKNTLIDA  337 (421)
T ss_pred             HHHHHHHHHHHH
Confidence            888887777654

>PLN02624 ornithine-delta-aminotransferase

Probab=99.67  E-value=8.4e-15  Score=149.79  Aligned_cols=248  Identities=17%  Similarity=0.086  Sum_probs=162.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.....+      ....+...++.+.++++++.   +.++++++|+||+..|++.++.....++|.
T Consensus        92 ~~p~v~~ai~~ql~~~~~~~~------~~~~~~~~~la~~L~~~~~~---~~~~f~~SGseA~e~AlklAr~~~~~~~g~  162 (474)
T PLN02624         92 CHPKIIKALTEQAEKLTLSSR------AFYNDKFPEFAEYLTSMFGY---DMVLPMNTGAEGVETAIKLARKWGYEKKGI  162 (474)
T ss_pred             CCHHHHHHHHHHHHhcCCccc------ccCCHHHHHHHHHHHhhcCC---CeEEEeCChHHHHHHHHHHHHHHHHhhcCC
Confidence            489999999999987533321      11234556677778887754   378999999999999999988765444554


Q ss_pred             C--CCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210        224 S--LPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPY  285 (435)
Q Consensus       224 ~--~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt  285 (435)
                      +  +..|+....+|++....+.....             .+..+|.     -|++.+++.++   +++++|+++.+++++
T Consensus       163 ~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~  237 (474)
T PLN02624        163 PKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEA  237 (474)
T ss_pred             CCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCC
Confidence            3  45677777777775433322211             1222322     26888988886   468899999999999


Q ss_pred             ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC--CCCCccEEEecCCCCCCcc-CCcEEEEE
Q psy10210        286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF--SLPGVTSISVDTHKYGFTP-KGSSVVLY  358 (435)
Q Consensus       286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~--~~~gvd~~~~s~hK~~~~p-~g~g~il~  358 (435)
                      |.+-+    +++|.++|++||+++|+||+|.|+..     .|.   .+..  .....|+++++  |.+.++ ..+|+++.
T Consensus       238 G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Gr-----tG~---~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~  307 (474)
T PLN02624        238 GVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR-----TGK---MLACDWEEVRPDVVILG--KALGGGVIPVSAVLA  307 (474)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCc-----Ccc---hhhHHhcCCCCCEEEec--ccccCCCCcceeeee
Confidence            98844    99999999999999999999987532     121   2222  22235888875  764444 56788666


Q ss_pred             eCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        359 RDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       359 ~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ++ ++....   .+...+.++     .+  +....+++.++++.+..+++.++++++.+.+++.++++
T Consensus       308 ~~-~i~~~~---~~~~~~~T~-----~g--~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l  364 (474)
T PLN02624        308 DK-DVMLCI---KPGEHGSTF-----GG--NPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKI  364 (474)
T ss_pred             cH-HHHhHh---ccCCcCCCC-----CC--CHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence            54 443221   122222222     22  22234577778888777777778877777777666554

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.67  E-value=6.9e-15  Score=153.51  Aligned_cols=230  Identities=13%  Similarity=0.109  Sum_probs=160.4

Q ss_pred             HHHHHHHHHhCCCCCCCCCccccccc-CChHhH---HHHHHH-HHHhhcCCCCC-CCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210        117 ILELVSNYLARGHYDWKHGRVSGAVY-YYQQDL---VDLLTE-VFGLTSYTNPL-HPDIFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l---~~~i~~-~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      +.+.+.++...+...|.-+...++.. ...|..   .+..-+ .+.. .-++.. .-+.--.......+..+..|+.||+
T Consensus       111 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~~~p~g~~f~~f~Gen~fr~-Dlte~~~~LddL~~~eG~i~eAq~~AA~~fgA  189 (720)
T PRK13578        111 FFDTLTDYVEMGNSTFDCPGHQGGQFFRKHPAGRQFYDFFGENLFRA-DMCNADVKLGDLLIHEGAAKDAQKHAAKVFNA  189 (720)
T ss_pred             HHHHHHHHHhCCCceeeCCcCCCCCCCCcChhhhHHHHHhhhhhhhh-hcccccccCCCCCCCChHHHHHHHHHHHHhCC
Confidence            78889999888888886555443332 123332   222211 1111 111100 0111111234566777889999999


Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCEEEEEecC--CC---ccccH--
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMKVKHIRLT--SS---YTVDL--  262 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~v~~vp~~--~~---~~~d~--  262 (435)
                      +.  .-++++|+|.+|..++.+.+.+++.        |+++..+|-+...+ +...|+.+++++..  ..   +.++.  
T Consensus       190 d~--tyFlvNGTS~gn~a~i~a~~~~Gd~--------VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~  259 (720)
T PRK13578        190 DK--TYFVLNGTSASNKVVTNALLTPGDL--------VLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHC  259 (720)
T ss_pred             Cc--eEEEeCChhHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCChHH
Confidence            75  4789999999999999999999887        99999999999985 88899999999764  21   23454  


Q ss_pred             ---HHHHHHhhcC----------ceEEEEeCCCCCcccccCHHHHHHH-HHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        263 ---AALQSAITGN----------TVMLVGSMPNFPYGTMDDIGAIAKL-GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       263 ---~~l~~~i~~~----------~~~v~~~~p~nptG~~~~i~~i~~l-a~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                         +.++++|.++          .+++++++|+. .|.+.++++|+++ +++++ +||+|+||++.........++  ++
T Consensus       260 ~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~--p~  335 (720)
T PRK13578        260 FDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADC--SP  335 (720)
T ss_pred             ccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccC--Ch
Confidence               4488888654          58999999988 8999999999999 67888 999999999875421111111  11


Q ss_pred             CCCCCCCcc----EEEecCCCCCCccCCcEEEEEeCCc
Q psy10210        329 FDFSLPGVT----SISVDTHKYGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       329 ~d~~~~gvd----~~~~s~hK~~~~p~g~g~il~~~~~  362 (435)
                      .. ...|.|    +++.|+||.+.+-..+|++.+++..
T Consensus       336 ~a-l~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~  372 (720)
T PRK13578        336 LL-LELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH  372 (720)
T ss_pred             hh-hhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc
Confidence            21 234677    9999999998787888998887654

>PRK05965 hypothetical protein; Provisional

Probab=99.67  E-value=7e-15  Score=149.69  Aligned_cols=278  Identities=16%  Similarity=0.088  Sum_probs=178.9

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...+++..   +++|++.+++.+++.+..+....    +....+...++.+.+++++..+. +.++++++|+
T Consensus        43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGS  117 (459)
T PRK05965         43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGY----FHFGSEPAIRLAAKLAERAPGSL-NHVYFTLGGS  117 (459)
T ss_pred             CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccc----cccCCHHHHHHHHHHHhhCCCCc-CEEEEeCChh
Confidence            3445555544333222   34899999999998864322211    11234555677788888874322 4799999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCc----ccc----
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSY----TVD----  261 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~----~~d----  261 (435)
                      ||+..|++.++..... +|. .+.+||....+|++....+.. .+.            .+..+|....+    .-|    
T Consensus       118 EAve~AlKlAr~~~~~-~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (459)
T PRK05965        118 DAVDSAVRFIRHYWNA-TGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAI  196 (459)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHH
Confidence            9999999999877543 343 356788888888886433222 111            12333322101    112    


Q ss_pred             ----HHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        262 ----LAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       262 ----~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                          ++++++.+.    +++.+|+++..+...|.+    +.++++.++|++||+++|.||++.||-.        ....+
T Consensus       197 ~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGR--------tG~~~  268 (459)
T PRK05965        197 IAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGR--------TGPLF  268 (459)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCcc--------Cchhh
Confidence                356777775    467889998877767766    6799999999999999999999998833        22233


Q ss_pred             CCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        330 DFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       330 d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      .+...|+  |+++++  |.+.+. .++|.++.+++ +.+......    ....+++|+..++       ..+++.++++.
T Consensus       269 a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl-------~~Aaa~a~L~~  338 (459)
T PRK05965        269 ACEAEGVVPDLMTVA--KGLTSGYVPMGAVLMSDH-VYQGIADGAGAAAPVGHGYTYSAHPV-------SAAVGLEVLRL  338 (459)
T ss_pred             hHhhcCCCCCeEEec--hhhccCCcceeEEEEcHH-HHHHHhccccccccccccCCCCCCHH-------HHHHHHHHHHH
Confidence            3434444  888887  875555 36788776654 332210000    1123334333333       33788899999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +.++++.++++++.+++.+.++++..
T Consensus       339 l~~~~l~~~~~~~g~~l~~~l~~l~~  364 (459)
T PRK05965        339 YHEGGLLANGQKAGPRFAAGLDALRA  364 (459)
T ss_pred             HHhccHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999999988887643

>PRK04311 selenocysteine synthase; Provisional

Probab=99.67  E-value=1.5e-14  Score=146.38  Aligned_cols=199  Identities=16%  Similarity=0.227  Sum_probs=137.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcCh-hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFP-GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+++.+++.+++..+.   .+.++... ........+++.+++++|+.   ..+++++|+.|+.+++.++ .+++     
T Consensus        99 ~~~v~eav~~~~~~~~---~le~~l~~g~~g~r~~~~e~~lA~l~Gae---~a~vv~sgtaAl~l~l~~l-~~Gd-----  166 (464)
T PRK04311         99 SEAAIEAVTEAARGYS---NLEYDLATGKRGSRDRALAALLCALTGAE---DALVVNNNAAAVLLALNAL-AAGK-----  166 (464)
T ss_pred             CHHHHHHHHHHHhccc---ccccchhhcccchHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHh-CCCC-----
Confidence            5677777877766532   12222211 11122447788999999875   3578888999999988664 3444     


Q ss_pred             CCCeEEEeCCCchh------HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCC--cc--cccCHHH
Q psy10210        224 SLPEIVLPTTAHPA------FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFP--YG--TMDDIGA  293 (435)
Q Consensus       224 ~~~~viv~~~~~~~------~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~np--tG--~~~~i~~  293 (435)
                         +||+++..|..      +...++..|+++++++.+  ...++++++++++++|++|++++++|+  +|  ...|+++
T Consensus       167 ---eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~e  241 (464)
T PRK04311        167 ---EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAE  241 (464)
T ss_pred             ---EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHH
Confidence               49999876552      334567789999998764  245799999999999999999999998  45  4579999


Q ss_pred             HHHHHHHcCCcEEEeccccchhhhcccccCCCCCC--CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP--FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       294 i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~--~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      |+++|++||+++++|++.|.+. .+. ..|.+..+  .+....|+|++++|+|||++||. +|+++.+ +++.
T Consensus       242 I~~lak~~gi~vivD~gsG~l~-~~~-~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~-~~li  310 (464)
T PRK04311        242 LAALGKEHGLPVVYDLGSGSLV-DLS-QYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGK-KELI  310 (464)
T ss_pred             HHHHHHHcCCeEEEECCCcccc-cch-hccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEc-HHHH
Confidence            9999999999999999754321 110 01111112  12334689999999999977774 6875554 4544

>PRK07482 hypothetical protein; Provisional

Probab=99.67  E-value=4.9e-15  Score=150.90  Aligned_cols=276  Identities=14%  Similarity=0.023  Sum_probs=177.5

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+.++.   +++|++.+++.+++.+..+..+.    .....+...++.+.+++++..+- +.++++++||
T Consensus        47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~----~~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGS  121 (461)
T PRK07482         47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY----VGHGTEASITLSKRIIDRAPAGM-SKVYYGLSGS  121 (461)
T ss_pred             CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc----cccCCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence            3455555544443322   35899999999999874322221    11235667778888888874322 4799999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCcc----------
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYT----------  259 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~----------  259 (435)
                      ||+..|++.++..... +|. .+++||....+|++....+... |            ..+..+|....+.          
T Consensus       122 EAve~AlKlAr~~~~~-~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  200 (461)
T PRK07482        122 DANETQIKLVWYYNNV-LGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQ  200 (461)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHH
Confidence            9999999999876433 343 2567888888888854332221 1            1123333221100          


Q ss_pred             ---ccHHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        260 ---VDLAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       260 ---~d~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                         -+++++++.+.    +++.+|+++......|.+    +.+++|.++|++||+++|+||++.||-.        ....
T Consensus       201 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGR--------tG~~  272 (461)
T PRK07482        201 FSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR--------LGSM  272 (461)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCc--------Ccch
Confidence               14677888774    357888888877666766    5699999999999999999999998833        2223


Q ss_pred             CCCCCCCc--cEEEecCCCCCCccC-CcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHH
Q psy10210        329 FDFSLPGV--TSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMM  401 (435)
Q Consensus       329 ~d~~~~gv--d~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~  401 (435)
                      +.+...|+  |+++++  |.+.+.. ++|.++.+++ +.+......    ....+++|+..+       ...+++.++++
T Consensus       273 ~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnp-------l~~Aaa~a~L~  342 (461)
T PRK07482        273 FGSDHYGIEPDLITVA--KGLTSAYAPLSGSIVGEK-VWDVLEQGSDEHGAIGHGWTYSGHP-------ICAAAALANLD  342 (461)
T ss_pred             hhHHhcCCCCCEEEEc--cccccCccccceeeecHH-HHHHHhcccccCCccccCCCCCcCH-------HHHHHHHHHHH
Confidence            33444444  888876  8755543 6777676654 322110000    112333333222       33478889999


Q ss_pred             HhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        402 YFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       402 ~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+.++++.+++++..+.+.+.++++
T Consensus       343 ~~~~~~l~~~~~~~g~~l~~~L~~l  367 (461)
T PRK07482        343 ILERENLVGNAAEVGAYFRARLRAA  367 (461)
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988888754

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.67  E-value=9e-15  Score=147.59  Aligned_cols=249  Identities=14%  Similarity=0.067  Sum_probs=163.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+......      ....+...++.+.+++++.... +.++++++|+||+..|++.++..... +| 
T Consensus        92 ~hp~v~~Av~~ql~~l~~~~~------~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~t~~-~g-  162 (442)
T TIGR03372        92 RNPNVIAAVENQLAKQPLHSQ------ELLDPLRALLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSP-RG-  162 (442)
T ss_pred             CCHHHHHHHHHHHHhCCCccc------ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHhh-cC-
Confidence            489999999999876422211      1124556677888888875433 37899999999999999999876421 12 


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccccHHHHHHHhh------cCceEEEEeCCCCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTVDLAALQSAIT------GNTVMLVGSMPNFP  284 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~d~~~l~~~i~------~~~~~v~~~~p~np  284 (435)
                       +++|+....+|++....+... +-            .+..+|.     .|.+++++.+.      +++.+|+++.....
T Consensus       163 -r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~  236 (442)
T TIGR03372       163 -KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAAIILEPIQGE  236 (442)
T ss_pred             -CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEEEEEeCccCC
Confidence             456999998888855443332 21            1223332     25666766664      35788888887777


Q ss_pred             cccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCcc-CCcEEEE
Q psy10210        285 YGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTP-KGSSVVL  357 (435)
Q Consensus       285 tG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p-~g~g~il  357 (435)
                      .|.+.+    ++++.++|++||+++|+||++.||-.     .|   ..+.+...|+  |++++  .|.+.+. .++|.++
T Consensus       237 gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GR-----tG---~~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv  306 (442)
T TIGR03372       237 GGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGR-----TG---KMFACEHEGVQPDILCL--AKALGGGVMPIGATI  306 (442)
T ss_pred             CCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCc-----cc---cchhhhhcCCCCCeeee--hhhhcCCcccceEEE
Confidence            777755    99999999999999999999987622     22   2334433443  87775  4875544 3577766


Q ss_pred             EeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+ +++.+... ..+...+++     ..|  +....+++.++++.+.++++.+++++..+++.+.++.+
T Consensus       307 ~~-~~i~~~~~-~~~~~~~~T-----~~g--np~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l  366 (442)
T TIGR03372       307 AT-EAVFSVLF-DNPFLHTTT-----FGG--NPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQL  366 (442)
T ss_pred             ec-HHHHHhhh-ccCccccCC-----CCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            65 44443211 011112222     222  22334678899999988899999999988888777654

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.67  E-value=6.4e-15  Score=148.28  Aligned_cols=247  Identities=15%  Similarity=0.048  Sum_probs=160.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+......      ....+...++.+.++++++.   +.++++++|+||+..|++.++.....+.+.
T Consensus        56 ~~p~v~~A~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~~~~sGseA~e~Alk~ar~~~~~~~~~  126 (406)
T PRK12381         56 AHPALREALNEQASKFWHTGN------GYTNEPVLRLAKKLIDATFA---DRVFFCNSGAEANEAALKLARKYAHDRYGS  126 (406)
T ss_pred             CCHHHHHHHHHHHhhcccccC------ccCCHHHHHHHHHHHhhCCC---CeEEEcCCcHHHHHHHHHHHHHHHhhcCCC
Confidence            389999999999876422211      11233445677777877643   389999999999999999988664321122


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCE-------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMK-------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM--  288 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~-------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~--  288 (435)
                      .+.+|+..+..|++....+...+..             +..+|     ..|++++++.+.+++++|+++ |.+++|.+  
T Consensus       127 ~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~~  200 (406)
T PRK12381        127 HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAA-----YNDLNSASALIDDQTCAVIVE-PIQGEGGVIP  200 (406)
T ss_pred             CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeC-----CCCHHHHHHhccCCeeEEEEe-CCcCCCCCcC
Confidence            4567999899888865444333221             11222     247899999998888888885 77777753  


Q ss_pred             ---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        289 ---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       289 ---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                         +.+++|.++|++||+++|+||+|.|+..     .|.   .+.+...+  .|++++  .|.+.+...+|+++.++ ++
T Consensus       201 ~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr-----~G~---~~~~~~~~v~pDi~t~--sK~l~gG~~ig~~~~~~-~~  269 (406)
T PRK12381        201 ADKAFLQGLRELCDRHNALLIFDEVQTGVGR-----TGE---LYAYMHYGVTPDVLTT--AKALGGGFPIGAMLTTE-KC  269 (406)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEcchhhCCCC-----Ccc---hhhhHhhCCCCCEEEe--hhhhhCCCceEEEEEcH-HH
Confidence               7799999999999999999999987633     121   12211222  466554  58754556688866654 44


Q ss_pred             ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+..   .....+.     +..+  +....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       270 ~~~~---~~~~~~~-----t~~~--~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l  322 (406)
T PRK12381        270 ASVM---TVGTHGT-----TYGG--NPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI  322 (406)
T ss_pred             Hhhc---CCCCCCC-----CCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            4321   1111111     2222  22233567777777777778888888888888777665

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.66  E-value=2.5e-15  Score=147.84  Aligned_cols=277  Identities=16%  Similarity=0.075  Sum_probs=185.2

Q ss_pred             CCCCCCCCccccc---ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGA---VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~---~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++.++.++..+..   .-+|.|++.+++.+++.+..+.++......|     ..++.++++++....+-+.+++|+||++
T Consensus        42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-----a~~LA~~L~~~aP~~~l~~vFf~~sGSe  116 (449)
T COG0161          42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-----AIELAEKLAELAPEGGLDHVFFTDSGSE  116 (449)
T ss_pred             CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch-----HHHHHHHHHHhCCCCCccEEEEeCCchH
Confidence            3445555444432   2335999999999999987666554443333     4567778888886322358999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCC-CCeEEEeCCCchhHHHHH-HHcC-------------CEEEEEecCC--------Ccc--
Q psy10210        205 SIMMACKAYRDYAREEKGIS-LPEIVLPTTAHPAFDKAA-NYFG-------------MKVKHIRLTS--------SYT--  259 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~-~~~viv~~~~~~~~~~~~-~~~g-------------~~v~~vp~~~--------~~~--  259 (435)
                      |++.|++..+.+... +|.+ +.++|.-...|++-.-.+ ...|             ..+.++|...        .+.  
T Consensus       117 AvEtAlKma~qY~~~-~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~  195 (449)
T COG0161         117 AVETALKMALQYWRA-RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEE  195 (449)
T ss_pred             HHHHHHHHHHHHHHh-cCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHH
Confidence            999999999998887 7776 555887778887733222 2222             1233444321        111  


Q ss_pred             --ccHHHHHHHhhc----CceEEEEeCCCCC-cccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        260 --VDLAALQSAITG----NTVMLVGSMPNFP-YGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       260 --~d~~~l~~~i~~----~~~~v~~~~p~np-tG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                        -..++|++.|..    +.+++++...... .|.+    ..++++.++|++||+++|.||+-.||        |+....
T Consensus       196 ~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGF--------GRTG~~  267 (449)
T COG0161         196 FAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGF--------GRTGKM  267 (449)
T ss_pred             HHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCC--------CcCchh
Confidence              225667777753    5677777776665 5555    56999999999999999999999988        555567


Q ss_pred             CCCCCCCc--cEEEecCCCCCC-ccCCcEEEEEeCCcccccccc-ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        329 FDFSLPGV--TSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYF-VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       329 ~d~~~~gv--d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~-~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                      |.....|+  |+++++  |.+- |-.+.|.++++++-+...... ...-..|.+|..+++++       |++.+.++.+.
T Consensus       268 FA~e~~gi~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlac-------AaAla~L~i~e  338 (449)
T COG0161         268 FACEHAGIVPDILCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLAC-------AAALANLDILE  338 (449)
T ss_pred             hhhhhcCCCCCeeeec--ccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHH-------HHHHHHHHHHH
Confidence            77777776  999888  6432 224567767776543211000 11112333343333333       78889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHh-cC
Q psy10210        405 FEAQVWICVRYHFNYKSCLQN-LS  427 (435)
Q Consensus       405 ~~g~~~~~~~~~~~~~~~~~~-l~  427 (435)
                      ++++.++++++..++.+.++. +.
T Consensus       339 ~e~l~~~~~~~~~~l~~~L~~~l~  362 (449)
T COG0161         339 EEDLLERVAEIGAYLQAGLQAALA  362 (449)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999988886 44

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.66  E-value=6.8e-15  Score=149.44  Aligned_cols=254  Identities=13%  Similarity=0.082  Sum_probs=165.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+......      ....+...++.+.+++++..+. +.++++++|+||+..|++.++..... +| 
T Consensus        99 ~~p~v~~Ai~~ql~~l~~~~~------~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEAve~AlklAr~~t~~-~g-  169 (459)
T PRK11522         99 RNPVVVSAVQNQLAKQPLHSQ------ELLDPLRAMLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSP-RG-  169 (459)
T ss_pred             CCHHHHHHHHHHHhhCccccc------ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCchHHHHHHHHHHHHHhcc-CC-
Confidence            489999999999886422211      1224556677778888775333 37999999999999999999876532 22 


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CCEEEE---EecCCCc----cccHHHHHHHhh------cCceEEEEeCCCCCccccc
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GMKVKH---IRLTSSY----TVDLAALQSAIT------GNTVMLVGSMPNFPYGTMD  289 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~~v~~---vp~~~~~----~~d~~~l~~~i~------~~~~~v~~~~p~nptG~~~  289 (435)
                       +..|+....+|++....+... +-....   .|..++.    ..|.+++++.+.      +++.+|+++......|.+.
T Consensus       170 -r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~  248 (459)
T PRK11522        170 -KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVIL  248 (459)
T ss_pred             -CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCcc
Confidence             446888888888855443332 211110   1110100    126778888775      3567888888877778874


Q ss_pred             C----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCc
Q psy10210        290 D----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLK  362 (435)
Q Consensus       290 ~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~  362 (435)
                      +    ++++.++|++||+++|+||++.||-.     .|   ..+.+...|  .|+++++  |.+.+. .++|.++.++ +
T Consensus       249 pp~~yl~~lr~lc~~~g~llI~DEV~tG~GR-----tG---~~~a~e~~gv~PDivt~g--K~lggG~~Pigav~~~~-~  317 (459)
T PRK11522        249 PPEGYLTAVRKLCDEFGALLILDEVQTGMGR-----TG---KMFACEHENVQPDILCLA--KALGGGVMPIGATIATE-E  317 (459)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEeccceecCCc-----cc---hhhhhhccCCCCCEEEec--hhhhCCCccceeEEEcH-H
Confidence            4    99999999999999999999987622     22   223333334  3877665  875544 3578867764 4


Q ss_pred             cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        363 YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       363 ~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+.. ...+...+++|+     |  +....+++.++++.+.++++.+++++..+++++.++++
T Consensus       318 i~~~~-~~~~~~~~~T~~-----g--np~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l  373 (459)
T PRK11522        318 VFSVL-FDNPFLHTTTFG-----G--NPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQL  373 (459)
T ss_pred             HHHHh-ccCCcccCCCCC-----C--CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence            33321 111212233322     2  22334788899999988899999999999988887765

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.66  E-value=4e-15  Score=147.22  Aligned_cols=238  Identities=13%  Similarity=0.033  Sum_probs=154.1

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMK  248 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~  248 (435)
                      .|.+.++|.    .+++++|.+   .++.|++||.|+.++..+..++|+.        |  +.+.|.....+ ....|+.
T Consensus        70 ~~s~~~lE~----~va~~~G~~---~av~v~sGT~Al~ll~~l~l~pGDe--------V--psn~~f~Tt~ahIe~~Gav  132 (450)
T TIGR02618        70 SRNFYHLER----TVRELYGFK---YVVPTHQGRGAENLLSQIAIKPGDY--------V--PGNMYFTTTRYHQEKNGAT  132 (450)
T ss_pred             CCcHHHHHH----HHHHHHCCC---eEEEcCCHHHHHHHHHHhCCCCcCE--------E--CCceeHHHHHHHHHhCCeE
Confidence            455666665    556677764   5899999999988765444555543        5  66777665555 6888987


Q ss_pred             EEEEecC----------CCccccHHHHHHHhhc----CceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210        249 VKHIRLT----------SSYTVDLAALQSAITG----NTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCC  310 (435)
Q Consensus       249 v~~vp~~----------~~~~~d~~~l~~~i~~----~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~  310 (435)
                      .+.++.+          .+|.+|+++++++|++    ++.+|.+.+++|.. |.+   +++++|.++|++||+++|.|+|
T Consensus       133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaA  212 (450)
T TIGR02618       133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDAT  212 (450)
T ss_pred             EEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence            7666442          3588999999999986    34577888888865 677   7899999999999999999999


Q ss_pred             ccchhhhcc--cccCCCCCCC-C---CCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCcc
Q psy10210        311 LGGFLAPFM--SAAGYPLPPF-D---FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSV  384 (435)
Q Consensus       311 ~~~~~~~~~--~~~g~~~~~~-d---~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~  384 (435)
                      ....-..|.  +..|+...+. +   -....+|++++|+||.+++|.| |+++++++++.++.......+ +|.    ..
T Consensus       213 R~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~-eG~----~t  286 (450)
T TIGR02618       213 RCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVF-EGM----PS  286 (450)
T ss_pred             chhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc-CCc----cc
Confidence            865222221  1122222222 0   0122479999999999888986 777889998876644433444 332    11


Q ss_pred             ccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        385 SGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       385 ~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      .|.-++..+.+...++...-...|.++.....+++.+.+++. ++..
T Consensus       287 yGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv  332 (450)
T TIGR02618       287 YGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA-GVPI  332 (450)
T ss_pred             cCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence            222222233333334555445556665555566666666654 5544

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.66  E-value=1.1e-14  Score=146.01  Aligned_cols=183  Identities=13%  Similarity=0.097  Sum_probs=128.7

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHH----------hh-------------hhcCCCCCe
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDY----------AR-------------EEKGISLPE  227 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~----------~~-------------~~~g~~~~~  227 (435)
                      ..+.++|..+.+...++||+... ++-. .+|+.|+..++.++.++          |+             .++-..++.
T Consensus        91 ~~~d~ie~l~~~ra~~lf~a~~a-nvqp-~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~  168 (493)
T PRK13580         91 QNVDTVEWEAAEHAKELFGAEHA-YVQP-HSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR  168 (493)
T ss_pred             chHHHHHHHHHHHHHHHhCCCcc-cccC-CCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence            45667888888899999988764 4443 45689999999999865          11             001112455


Q ss_pred             EEEeCCCchhH---HHHHHHcC--CEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210        228 IVLPTTAHPAF---DKAANYFG--MKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY  301 (435)
Q Consensus       228 viv~~~~~~~~---~~~~~~~g--~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~  301 (435)
                      |+..+..+.+.   .......|  .+.+..+++ +++.+|.+++++.+.+++..|++++.+|- |...|+++|.++|++|
T Consensus       169 i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~  247 (493)
T PRK13580        169 LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEV  247 (493)
T ss_pred             EEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHc
Confidence            77665544331   11122223  456667777 57889999999999999999999988886 5577999999999999


Q ss_pred             CCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        302 GIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       302 ~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      |+++++|++|+.++++-     -..+ ..+. ..++|++++++||+++||.| |+++++ +++.
T Consensus       248 gA~L~VD~AH~~Gligg-----~~~~~~~~~-~~~~D~vtgT~hKaL~GP~G-G~I~~~-~~l~  303 (493)
T PRK13580        248 GAVLMVDMAHFAGLVAG-----KVFTGDEDP-VPHADIVTTTTHKTLRGPRG-GLVLAK-KEYA  303 (493)
T ss_pred             CCEEEEECchhhceecc-----ccchhhcCC-CCCCcEEEeCChhhccCCCe-EEEEec-HHHH
Confidence            99999999999877641     1100 0111 24699999999999778886 776665 4443

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.65  E-value=1.1e-14  Score=142.84  Aligned_cols=250  Identities=14%  Similarity=0.081  Sum_probs=182.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++++++.+.+.++..+.. .+...-+...+..++.+.+|+++|.+.   .++.++|-.|+..++.++.++++.    
T Consensus        54 ~~~~~~~a~~~~~~~~g~g~~-gsR~i~G~~~~h~~LE~~lA~f~g~e~---al~f~SGy~AN~~~i~~l~~~~dl----  125 (388)
T COG0156          54 SHPELIEAAKAAIRRYGVGAG-GSRLISGTSDLHVELEEELADFLGAEA---ALLFSSGFVANLGLLSALLKKGDL----  125 (388)
T ss_pred             CCHHHHHHHHHHHHHhCCCCC-CcCcccCCcHHHHHHHHHHHHHhCCCc---EEEEcccchhHHHHHHHhcCCCcE----
Confidence            388999999999998654432 334455677788888889999998863   466666799999999999887765    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                          |+...-.|.+..+.++..+++++..+-     .|+++|++.+.+      +.++|++...-+..|.+.|+++|.++
T Consensus       126 ----i~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L  196 (388)
T COG0156         126 ----IFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVEL  196 (388)
T ss_pred             ----EEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHH
Confidence                888888999999999999999988874     478999999876      35888888888999999999999999


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG  376 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g  376 (435)
                      +++|+.+++|||+|+-+++   +..|.+.. .+......+|++..++.|. +|..  |..+..+..+.+........+.-
T Consensus       197 ~~ky~a~L~VDEAHa~Gv~---G~~GrG~~e~~g~~~~~vdi~~gTlsKA-lGs~--Gg~v~g~~~~~d~L~~~ar~~if  270 (388)
T COG0156         197 AEKYGALLYVDEAHAVGVL---GPNGRGLAEHFGLEPEEVDIIVGTLGKA-LGSS--GGYIAGSAALIDYLRNRARPFIF  270 (388)
T ss_pred             HHHhCcEEEEEcccccccc---CCCCccHHHHhCCCCccceEEEEEchhh-hccc--CceeeCcHHHHHHHHHhCCceec
Confidence            9999999999999998877   33344432 1222223469999999999 4544  44466776665543333333332


Q ss_pred             CCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHH
Q psy10210        377 GNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       377 g~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~  424 (435)
                              ..+-++...+++.++++.+.. ...+++.++....++...+
T Consensus       271 --------StalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~  311 (388)
T COG0156         271 --------STALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLK  311 (388)
T ss_pred             --------cCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence                    234455555667777777653 3455666666666664433

>PLN00144 acetylornithine transaminase

Probab=99.65  E-value=1.1e-14  Score=145.16  Aligned_cols=248  Identities=16%  Similarity=0.053  Sum_probs=162.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+......      ....+...++.+.++++.+.   +.++++++|+||++.|++.++..... +|.
T Consensus        32 ~~p~v~~ai~~q~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~f~~sGseA~e~AlklAr~~~~~-~~~  101 (382)
T PLN00144         32 GDPDWVKAVAEQAGTLAHVSN------VYHTIPQVELAKRLVASSFA---DRVFFCNSGTEANEAAIKFARKYQRV-RAP  101 (382)
T ss_pred             CCHHHHHHHHHHHHhcCCccc------cccCHHHHHHHHHHHhcCCC---CeEEEeCCcHHHHHHHHHHHHHHHhc-cCC
Confidence            489999999999886422211      11234556777777777632   38999999999999999999876443 222


Q ss_pred             -C-------CCeEEEeCCCchhHHHHHHHcCCE-------------EEEEecCCCccccHHHHHHHhh-cCceEEEEeCC
Q psy10210        224 -S-------LPEIVLPTTAHPAFDKAANYFGMK-------------VKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMP  281 (435)
Q Consensus       224 -~-------~~~viv~~~~~~~~~~~~~~~g~~-------------v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p  281 (435)
                       +       +++|+....+|++....+....-.             +..+|.     -|++++++.+. .++++|+++..
T Consensus       102 ~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aavi~eP~  176 (382)
T PLN00144        102 DKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQKGKTAAVFVEPV  176 (382)
T ss_pred             CCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcCCCCeEEEEEccc
Confidence             1       467998888888865444432111             122221     26889998885 36788888888


Q ss_pred             CCCcccc--cC--HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEE
Q psy10210        282 NFPYGTM--DD--IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL  357 (435)
Q Consensus       282 ~nptG~~--~~--i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il  357 (435)
                      +||.|..  +.  +++|.++|++||+++|+||++++|...     |.. .+.+......|++++  .|.+.+...+|+++
T Consensus       177 q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~-----g~~-~~~~~~~~~PDi~t~--sK~l~~G~pig~v~  248 (382)
T PLN00144        177 QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRT-----GYL-WAHEAYGVEPDIMTL--AKPLAGGLPIGAVL  248 (382)
T ss_pred             cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-----chH-hhhhhcCCCCCEEEe--cccccCCcceEEEE
Confidence            8885555  34  999999999999999999999987431     211 111111112465555  48865557788866


Q ss_pred             EeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+ +++.+..   .....+.++     .+  +....+++.++++.+..+++.++++++.+.+++.+++
T Consensus       249 ~~-~~~~~~~---~~~~~~~T~-----~~--~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~  305 (382)
T PLN00144        249 VT-EKVASAI---NPGDHGSTF-----AG--GPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRR  305 (382)
T ss_pred             Ec-HHHHhcc---CCCCCCCCC-----CC--CHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence            65 4443321   111222222     22  2233467778889998889999999998888776654

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.65  E-value=1.5e-14  Score=136.09  Aligned_cols=225  Identities=19%  Similarity=0.201  Sum_probs=152.9

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHc
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYF  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~  245 (435)
                      -|....+|+    +++.+-|.-.   .+.+++|..|+.+++..+...||.        |+.++.-|.+    +....+.+
T Consensus        61 NPT~~vlE~----RiAaLEGG~a---a~a~aSG~AA~~~ai~~la~aGD~--------iVss~~LYGGT~~lf~~tl~~~  125 (426)
T COG2873          61 NPTTDVLEE----RIAALEGGVA---ALAVASGQAAITYAILNLAGAGDN--------IVSSSKLYGGTYNLFSHTLKRL  125 (426)
T ss_pred             CchHHHHHH----HHHHhhcchh---hhhhccchHHHHHHHHHhccCCCe--------eEeeccccCchHHHHHHHHHhc
Confidence            345555554    5566665543   477889999999999999999987        8888876666    55666778


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |+++++++.+     |++.++++|++||++|++....||.+.+-|+++|+++|+++|++++||...+...+         
T Consensus       126 Gi~v~fvd~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl---------  191 (426)
T COG2873         126 GIEVRFVDPD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL---------  191 (426)
T ss_pred             CcEEEEeCCC-----CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee---------
Confidence            9999999743     69999999999999999999999999999999999999999999999999765322         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCcc--c-ccccc----ccCCCCCCCCCC----Ccc------ccC
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKY--K-HCQYF----VTSDWPGGNYGS----PSV------SGS  387 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~--~-~~~~~----~~~~~~gg~~~~----~~~------~gs  387 (435)
                      ..|++   .|+|+++-|..||.+|- ..+|.+++-...+  . ...|.    -.+.|.|-.|..    +.+      .+-
T Consensus       192 ~rP~~---hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~l  268 (426)
T COG2873         192 CRPIE---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLL  268 (426)
T ss_pred             cchhh---cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHH
Confidence            22454   48999999999995442 3344444433322  2 11111    112233322111    000      011


Q ss_pred             CC-chHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        388 RS-GGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       388 r~-~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      |. |+++...-+.+...|.|.+.-|++|..+++....+-|
T Consensus       269 RDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L  308 (426)
T COG2873         269 RDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFL  308 (426)
T ss_pred             HhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHH
Confidence            11 1122223333455688888888888888877665544

>PRK12403 putative aminotransferase; Provisional

Probab=99.64  E-value=2e-14  Score=146.34  Aligned_cols=259  Identities=18%  Similarity=0.131  Sum_probs=161.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+..+.+.+    .....+...++.+.++++++... +.++++++|+||+..|++.++..... +|.
T Consensus        71 ~hp~v~~A~~~q~~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AiklAr~~~~~-~g~  144 (460)
T PRK12403         71 GRKDLAAAAARQMEQLPYYNMF----FHTTHPAVIELSELLFSLLPGHY-SHAIYTNSGSEANEVLIRTVRRYWQV-LGK  144 (460)
T ss_pred             CCHHHHHHHHHHHHhCCCeecc----cccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHh-hCC
Confidence            5899999999999875433221    12234566777788888885332 37999999999999999999876432 232


Q ss_pred             C-CCeEEEeCCCchhH-HHHHHHcCCE-----------EEEEecCCCc----c--------ccHHHHHHHhh----cCce
Q psy10210        224 S-LPEIVLPTTAHPAF-DKAANYFGMK-----------VKHIRLTSSY----T--------VDLAALQSAIT----GNTV  274 (435)
Q Consensus       224 ~-~~~viv~~~~~~~~-~~~~~~~g~~-----------v~~vp~~~~~----~--------~d~~~l~~~i~----~~~~  274 (435)
                      + +..|+....+|++. ..+....|.+           +..+|....+    .        .+.+++++.+.    +++.
T Consensus       145 ~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ia  224 (460)
T PRK12403        145 PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVA  224 (460)
T ss_pred             CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceE
Confidence            2 34566656666664 3333333321           3334321100    0        11355665552    3577


Q ss_pred             EEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCC
Q psy10210        275 MLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGF  348 (435)
Q Consensus       275 ~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~  348 (435)
                      +|+++......|.+.+    +++|.++|++||+++|+||+++||-.     .|   ..+.+...|  .|+++++  |.+.
T Consensus       225 avI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR-----tG---~~~a~e~~gv~PDiv~~g--K~lg  294 (460)
T PRK12403        225 GFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGR-----TG---EWFAHEHFGFEPDTLSIA--KGLT  294 (460)
T ss_pred             EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Cc---hhhhhhhcCCCCCeEEEc--cccc
Confidence            8888887777787754    99999999999999999999988732     12   223333333  3888754  8755


Q ss_pred             ccC-CcEEEEEeCCccccccccccCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHHHh
Q psy10210        349 TPK-GSSVVLYRDLKYKHCQYFVTSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV-RYHFNYKSCLQN  425 (435)
Q Consensus       349 ~p~-g~g~il~~~~~~~~~~~~~~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~-~~~~~~~~~~~~  425 (435)
                      +.. .+|.++.+ +++.+........+ .+++|+     |  +....+++.++|+.+.++++.++++ +..+++++.+++
T Consensus       295 gG~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~-----g--nPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~  366 (460)
T PRK12403        295 SGYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYS-----G--HPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLRE  366 (460)
T ss_pred             ccccceEEEEEC-HHHHHHHhcCCCccccCCCCC-----C--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            443 67776765 44433211000111 222222     2  2334478889999998888888886 788888777665


Q ss_pred             c
Q psy10210        426 L  426 (435)
Q Consensus       426 l  426 (435)
                      +
T Consensus       367 l  367 (460)
T PRK12403        367 V  367 (460)
T ss_pred             H
Confidence            4

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.64  E-value=2.5e-14  Score=143.63  Aligned_cols=254  Identities=18%  Similarity=0.055  Sum_probs=160.7

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+..+..+.      ...+...++.+.++++.+.  .+.++++++|+||++.|++.++..... +|.
T Consensus        57 ~~p~v~~ai~~q~~~~~~~~~~------~~~~~~~~la~~L~~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~-~g~  127 (408)
T PRK04612         57 NDPDLVAALTEQAGKLWHTSNV------FYSAPPLKLAEELVTASRF--AEKVFLCNSGTEANEAAIKLVRKWASS-QGR  127 (408)
T ss_pred             CCHHHHHHHHHHHHhccccccc------cCCHHHHHHHHHHHhhCCC--CCEEEEcCchHHHHHHHHHHHHHHHHh-hCC
Confidence            4899999999988764222111      1234456677777777643  248999999999999999999876533 342


Q ss_pred             --CCCeEEEeCCCchhHHHHHHHc-CCEEEE---EecCCC----ccccHHHHHHHhhcCceEEEEeCCCCCcccc-----
Q psy10210        224 --SLPEIVLPTTAHPAFDKAANYF-GMKVKH---IRLTSS----YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-----  288 (435)
Q Consensus       224 --~~~~viv~~~~~~~~~~~~~~~-g~~v~~---vp~~~~----~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-----  288 (435)
                        .+++|+....+|++....+... +-....   -|...+    -..|++.+++++.++..+.++..|.+++|.+     
T Consensus       128 ~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~  207 (408)
T PRK04612        128 PADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAP  207 (408)
T ss_pred             CCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCH
Confidence              3567888888888855443322 211100   011110    0137888998886555555556666666655     


Q ss_pred             cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      +.+++|.++|++||+++|+||+|+++..     .|   ..+.....++  |+.++  .|.+.+...+|+++.++ ++.+.
T Consensus       208 ~~l~~l~~l~~~~g~llI~DEv~tg~gr-----~G---~~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~~~-~~~~~  276 (408)
T PRK04612        208 GFLARVRALCDQHDALLVLDEIQCGMGR-----TG---TLFAHWQEQVTPDIVTL--AKALGGGFPIGAMLAGP-KVAET  276 (408)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccccCCCc-----CC---chhhhhhcCCCCCEEEE--cchhcCCCceEEEEECH-HHHhh
Confidence            3599999999999999999999987633     12   1222222333  55555  48755446688876664 44322


Q ss_pred             cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        367 QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       367 ~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .   .....+++     ..++  ....+++.++++.+.++++.++++++.+++++.++++.
T Consensus       277 ~---~~~~~~~t-----~~~~--p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~  327 (408)
T PRK04612        277 M---QFGAHGTT-----FGGN--PLAAAVARVALRKLASPQIAANVARQSAALRAGLEALN  327 (408)
T ss_pred             h---cCCCcCCC-----CCCC--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence            1   11122222     2222  33346777888888888899999999988888877653

>PRK06541 hypothetical protein; Provisional

Probab=99.64  E-value=3.3e-14  Score=144.67  Aligned_cols=277  Identities=14%  Similarity=0.068  Sum_probs=172.0

Q ss_pred             CCCCCCCCcccc---cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSG---AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~---~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+.   ..-+++|++.+++.+++.+..+....     ....+...++.+.+++++..+- +.++++++|+|
T Consensus        50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~-----~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGse  123 (460)
T PRK06541         50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLW-----SYAHPPAIELAERLAALAPGDL-NRVFFTTGGSE  123 (460)
T ss_pred             CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcccc-----ccCCHHHHHHHHHHHHhCCCCc-CEEEEcCCcHH
Confidence            445555443332   22234899999999998864332211     1223556667777888764322 48999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC-----cccc----
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS-----YTVD----  261 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~-----~~~d----  261 (435)
                      |++.|++.++..... +|. .+.+|+....+|++....+... |.            .+..+|.+..     +.-+    
T Consensus       124 Ave~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  202 (460)
T PRK06541        124 AVESAWKLAKQYFKL-TGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF  202 (460)
T ss_pred             HHHHHHHHHHHHHHh-cCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence            999999999876432 232 2567888888888855433322 11            1333443211     1111    


Q ss_pred             ----HHHHHHHhh----cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        262 ----LAALQSAIT----GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       262 ----~~~l~~~i~----~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                          ++.+++.+.    +++.+|+++..+++.|.+.+    +++|.++|++||+++|+||++.||-.     .|   ..+
T Consensus       203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR-----~G---~~~  274 (460)
T PRK06541        203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR-----LG---EMF  274 (460)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cc---hhh
Confidence                366777775    34677777777888898855    99999999999999999999987732     12   122


Q ss_pred             CCCCCC--ccEEEecCCCCCCccC-CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        330 DFSLPG--VTSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       330 d~~~~g--vd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                      .+...|  .|+++++  |.+.+.. ++|+++.+++. .+..   .... ...+...|..+  +..+++++.++++.+..+
T Consensus       275 a~~~~gv~PDivt~g--K~l~~G~~pigav~~~~~i-~~~~---~~~~-~~~~~~~T~~g--np~~~aaala~l~~l~~~  345 (460)
T PRK06541        275 GCERFGYVPDIITCA--KGITSGYSPLGAMIASDRL-FEPF---LDGP-TMFLHGYTFGG--HPVSAAVALANLDIFERE  345 (460)
T ss_pred             hhhhcCCCCCEEEec--ccccCCccceeEEEEcHHH-HHHh---hcCC-CccccCCCCCC--CHHHHHHHHHHHHHHHhc
Confidence            232233  4877754  8654443 57887766543 2221   1110 00001112222  223456788889998888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC
Q psy10210        407 AQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ++.+++++..+++.+.++++.+
T Consensus       346 ~~~~~~~~~g~~l~~~L~~l~~  367 (460)
T PRK06541        346 GLLDHVRDNEPAFRATLEKLLD  367 (460)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999988887643

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.64  E-value=2e-14  Score=145.93  Aligned_cols=275  Identities=15%  Similarity=0.066  Sum_probs=176.1

Q ss_pred             CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+.+.   -+++|++.+++.+++.+..+....     ....+...++.+.++++++..- +.++++++|||
T Consensus        52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGse  125 (453)
T PRK06943         52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA-----GCTHEPAIELAERLAALTGGTL-GHAFFASDGAS  125 (453)
T ss_pred             CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCCHH
Confidence            44555544333322   224899999999998874332211     1123456678888888875432 37999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc------------
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY------------  258 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~------------  258 (435)
                      |+..|++.++..... +|. .+++|+....+|++....+... |-            .+..+|.....            
T Consensus       126 Ave~AlKlA~~~~~~-rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  204 (453)
T PRK06943        126 AVEIALKMSFHAWRN-RGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA  204 (453)
T ss_pred             HHHHHHHHHHHHHHH-hCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence            999999999876433 343 3567998888888854332221 11            12334332110            


Q ss_pred             cccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        259 TVDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       259 ~~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                      .-+++++++.+.   +++.+|+++. .+...|.+    +.++++.++|++||+++|.||++.||-.        ....+.
T Consensus       205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GR--------tG~~fa  276 (453)
T PRK06943        205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGR--------TGTFFA  276 (453)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCC--------CcchhH
Confidence            013567777775   4678888887 36666765    6799999999999999999999998732        222344


Q ss_pred             CCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        331 FSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       331 ~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                      +...|+  |+++++  |.+.+. .++|.++.+++ +.+......   ..+.+++|+     |  +....+++.++|+.+.
T Consensus       277 ~~~~gv~PDivt~g--Kgl~gG~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~T~~-----g--npl~~aaa~a~L~~i~  346 (453)
T PRK06943        277 CEQAGVWPDFLCLS--KGISGGYLPLSLVLSRDA-IFAAFYDDDVTRGFLHSHSYT-----G--NPLACRAALATLDLFA  346 (453)
T ss_pred             HHhCCCCCCeEeee--hhhccCcccceEEEEcHH-HHHhhcccCccCCccCCCCCC-----C--CHHHHHHHHHHHHHHH
Confidence            444444  888886  765555 36788777654 332211000   001233332     2  2233478889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        405 FEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       405 ~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++++.+++++..+++.+.++++.
T Consensus       347 ~~~l~~~~~~~G~~l~~~L~~l~  369 (453)
T PRK06943        347 EDDVLARNARKSARLRAALAPLA  369 (453)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999888887763

>PRK10534 L-threonine aldolase; Provisional

Probab=99.64  E-value=1.6e-15  Score=148.70  Aligned_cols=167  Identities=16%  Similarity=0.122  Sum_probs=111.9

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH--HHHcC-CEEEEEecCC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA--ANYFG-MKVKHIRLTS  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~--~~~~g-~~v~~vp~~~  256 (435)
                      +++.+++++|.++   .++++||++++.+++.+...+++.        |+++.|.|......  +...+ ++++.+++++
T Consensus        39 L~~~la~~~g~~~---~~v~~~g~~a~~~~l~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (333)
T PRK10534         39 LQDYAAELSGKEA---ALFLPTGTQANLVALLSHCERGEE--------YIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA  107 (333)
T ss_pred             HHHHHHHHhCCCe---EEEeCchHHHHHHHHHHhcCCCCe--------eEEechhhhhHhcCCchHHhcCceEEeecCCC
Confidence            3344555666543   478888999999999888776665        99998888643321  34444 6888888777


Q ss_pred             CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        257 SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.+|++++++++++      ++++|++++|+  +|.+   +.+++|.++|++|++++++||+|..+....   .+.   
T Consensus       108 ~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~---~~~---  179 (333)
T PRK10534        108 DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVA---YGC---  179 (333)
T ss_pred             CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHH---cCC---
Confidence            889999999999976      58899999766  5998   455667788999999999999976221100   011   


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ  367 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~  367 (435)
                      .........|.++++++|....+  .|+.++.++++.+..
T Consensus       180 ~~~~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~  217 (333)
T PRK10534        180 ELKEITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRA  217 (333)
T ss_pred             CHHHHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHH
Confidence            11100112355667889963334  564456677776543

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.64  E-value=1.8e-14  Score=146.45  Aligned_cols=268  Identities=16%  Similarity=0.086  Sum_probs=167.8

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...+++..   +++|++.+++.+++.+..+...     .....+...++.+.+++++.......++++++|+
T Consensus        53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs  127 (443)
T PRK06058         53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCF-----MVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA  127 (443)
T ss_pred             CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccc-----cccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence            3455555544433222   3489999999999886422111     1122356667888888887543223789999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcc------c---
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYT------V---  260 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~------~---  260 (435)
                      ||+..|++.++....      +++|+....+|++....+... +.             .+..+|....+.      .   
T Consensus       128 eA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (443)
T PRK06058        128 EAVENAVKIARSYTG------RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGE  201 (443)
T ss_pred             HHHHHHHHHHHHhhC------CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchH
Confidence            999999998876522      356999999998866544332 10             123333211111      0   


Q ss_pred             -----cHHHHHHHhh-cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        261 -----DLAALQSAIT-GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       261 -----d~~~l~~~i~-~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                           .++.+++.+. +++++|+++..+...|.+    +.+++|.++|++||+++|.||++.||...     |   ..+.
T Consensus       202 ~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRt-----G---~~fa  273 (443)
T PRK06058        202 EAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFART-----G---AWFA  273 (443)
T ss_pred             HHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-----h---hhhH
Confidence                 1233444443 456777766555444555    45999999999999999999999987431     2   1222


Q ss_pred             CCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        331 FSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       331 ~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      ....|  .|+++++  |.+.+...+|+++.++ ++.+..   .....+++|+..+       ...+++.++++.+..+++
T Consensus       274 ~~~~gv~PDiv~~g--K~l~~G~Pi~av~~~~-~i~~~~---~~~~~~~T~~gnp-------l~~aaa~a~L~~~~~~~l  340 (443)
T PRK06058        274 CEHEGIVPDLITTA--KGIAGGLPLSAVTGRA-EIMDAP---HPGGLGGTYGGNP-------VACAAALAAIETIEEDDL  340 (443)
T ss_pred             HHhcCCCCCEEEEc--ccccCCCccEEEEEcH-HHHhhc---cCCCCCCCCCCCH-------HHHHHHHHHHHHHHHcCH
Confidence            22233  3888876  8755556788877654 443321   1222333333222       234688889999888899


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy10210        409 VWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l  426 (435)
                      .+++++..+.+.+.++++
T Consensus       341 ~~~~~~~g~~l~~~L~~l  358 (443)
T PRK06058        341 VARARQIEALMTDRLRAL  358 (443)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999998888888765

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.63  E-value=2.6e-14  Score=145.13  Aligned_cols=267  Identities=12%  Similarity=0.102  Sum_probs=168.6

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC--CCCceEEcCCh
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG--PETCGCMTSGG  202 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~--~~~~~~~t~gg  202 (435)
                      ++..|.+...+++..   +++|++.+++.+++.+....+..     ....+...++.+.+++++...  ....++++++|
T Consensus        37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG  111 (442)
T TIGR00709        37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-----DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG  111 (442)
T ss_pred             CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc-----ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence            444555444333333   35899999999998763222211     123456677788888887532  12235557999


Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCccc--------c
Q psy10210        203 TESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYTV--------D  261 (435)
Q Consensus       203 teai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~~--------d  261 (435)
                      +||+..|++.++....      +++|+....+|++....+... |            ..+..+|.......        +
T Consensus       112 sEA~e~AlklAr~~tg------r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (442)
T TIGR00709       112 ADAVEAAIKLAKTYTG------RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAG  185 (442)
T ss_pred             HHHHHHHHHHHHHhcC------CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhH
Confidence            9999999999987632      456888888888865444432 2            11333443211111        1


Q ss_pred             ----HHHHHHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        262 ----LAALQSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       262 ----~~~l~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                          .+.+++.+.      +++.++++....+..|.+    +.+++|.++|++||+++|.||++.||...     |   .
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt-----G---~  257 (442)
T TIGR00709       186 SNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRS-----G---T  257 (442)
T ss_pred             HHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC-----C---c
Confidence                122344442      357888888877767766    67999999999999999999999987431     2   1


Q ss_pred             CCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210        328 PFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF  405 (435)
Q Consensus       328 ~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~  405 (435)
                      .+.+...|  .|+++++  |.+.+...+|+++.+++ +. . +  .+...+++|+     |  +..+.+++.++++.+.+
T Consensus       258 ~~a~~~~gv~PDiv~~g--K~l~~G~Pigav~~~~~-~~-~-~--~~~~~~~T~~-----g--npla~aaa~a~L~~i~~  323 (442)
T TIGR00709       258 MFAFEHAGIEPDFVVMS--KAVGGGLPLAVLLIAPE-FD-A-W--QPAGHTGTFR-----G--NQLAMVTGTEALNYWKD  323 (442)
T ss_pred             hhHHHHcCCCCcEEEEc--ccccCCcccEEEEEchH-Hh-c-c--CCCcCCCCCC-----c--CHHHHHHHHHHHHHHHh
Confidence            23322233  3888865  86555567899787655 32 1 1  1112222222     2  22334678889999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Q psy10210        406 EAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       406 ~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +++.+++++..+.+.+.++++.
T Consensus       324 ~~l~~~~~~~g~~l~~~L~~l~  345 (442)
T TIGR00709       324 DNLAQNAQERGERITSFLDDMI  345 (442)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999888887653

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.63  E-value=1e-14  Score=147.49  Aligned_cols=279  Identities=12%  Similarity=0.039  Sum_probs=173.0

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...+++..   +++|++.+++.+++.+..+....     ....+...++.+.+++++...- +.+.++++|+|
T Consensus        40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGse  113 (423)
T PRK05964         40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA-----GFTHEPAERLAQRLVALTPGGL-DHVFFSDSGSV  113 (423)
T ss_pred             CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHH
Confidence            445555543333222   24899999999998864322110     1123556677888888874222 47999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC--ccccHHHHHHH
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS--YTVDLAALQSA  268 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~--~~~d~~~l~~~  268 (435)
                      |+..|++.++..... +|. .+++|+....+|++....+... +-            .+..+|...+  ...+++++++.
T Consensus       114 A~e~A~klar~~~~~-~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~  192 (423)
T PRK05964        114 AVEVALKMALQYWRN-RGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEAL  192 (423)
T ss_pred             HHHHHHHHHHHHHHh-cCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHH
Confidence            999999999876543 342 3567998888888855443322 10            1233443211  11237888888


Q ss_pred             hh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccE
Q psy10210        269 IT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTS  338 (435)
Q Consensus       269 i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~  338 (435)
                      +.   +++.+|++.. .+...|..    +.+++|.++|++||+++|+||++.|+..     .|   ..+.+...  .+|+
T Consensus       193 l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr-----~G---~~~a~~~~~v~pDi  264 (423)
T PRK05964        193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGR-----TG---TLFACEQAGVSPDI  264 (423)
T ss_pred             HHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cc---chhHHHhcCCCCCe
Confidence            85   3567787776 46667765    5699999999999999999999987633     12   12221222  3477


Q ss_pred             EEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210        339 ISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF  417 (435)
Q Consensus       339 ~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~  417 (435)
                      ++++  |.+.++ .++|+++. ++++.+.... ...+. ....+.+..+  +...++++.++++.+..+++.++++++.+
T Consensus       265 ~~~~--K~l~gG~~p~~av~~-~~~i~~~~~~-~~~~~-~~~~~~T~~~--np~~~aaa~a~l~~l~~~~~~~~~~~~g~  337 (423)
T PRK05964        265 MCLS--KGLTGGYLPLAATLC-TAEIFEAFYS-DDRAK-AFMHSPSYTA--NPLACAAANASLDLFEDEPVLERVAALSA  337 (423)
T ss_pred             eeee--hhhhcCcccceEEEE-cHHHHHhhhc-CCccc-ccccCCCCCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            7665  986555 57888555 4555433110 00010 0001112222  22334677788888877889999999999


Q ss_pred             HHHHHHHhcCC
Q psy10210        418 NYKSCLQNLSD  428 (435)
Q Consensus       418 ~~~~~~~~l~~  428 (435)
                      .+.+.++++.+
T Consensus       338 ~l~~~l~~l~~  348 (423)
T PRK05964        338 GLAEGLEPFRD  348 (423)
T ss_pred             HHHHHHHhhcc
Confidence            98888876643

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.63  E-value=3.6e-14  Score=145.58  Aligned_cols=266  Identities=15%  Similarity=0.077  Sum_probs=166.0

Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      +++|++.+++.+++.+......+    +....+...++.+.+++++...+.+.++++++|+||+..|++.++..... +|
T Consensus       105 h~hp~v~~Av~~ql~~~~~~~~~----~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~-~g  179 (504)
T PLN02760        105 GSEPRLVAAATEQLNKLPFYHSF----WNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNA-LG  179 (504)
T ss_pred             CCCHHHHHHHHHHHhhccceecc----cccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHh-cC
Confidence            34899999999999874332111    12234566777778887763222247899999999999999999866432 34


Q ss_pred             C-CCCeEEEeCCCchhHHH-HHHHcCCE------------EEEEecCCCcc-------------ccHHHHHHHhh----c
Q psy10210        223 I-SLPEIVLPTTAHPAFDK-AANYFGMK------------VKHIRLTSSYT-------------VDLAALQSAIT----G  271 (435)
Q Consensus       223 ~-~~~~viv~~~~~~~~~~-~~~~~g~~------------v~~vp~~~~~~-------------~d~~~l~~~i~----~  271 (435)
                      . .+++||..+..|++... +....|..            +..+|.+..+.             ...+++++.+.    +
T Consensus       180 ~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~  259 (504)
T PLN02760        180 RPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPE  259 (504)
T ss_pred             CCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence            2 25678888877777433 32323321            22333211111             11245676663    3


Q ss_pred             CceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCC
Q psy10210        272 NTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHK  345 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK  345 (435)
                      ++.+|+++......|.+.+    +++|.++|++||+++|+||++.||-.     .|   ..+.+...|  .|+++++  |
T Consensus       260 ~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGR-----tG---~~~a~e~~gv~PDivtlg--K  329 (504)
T PLN02760        260 TIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGR-----LG---TMFGCDKYNIKPDLVSLA--K  329 (504)
T ss_pred             ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcc-----cc---hhhHHHhcCCCCcEEEec--c
Confidence            5778888887777787755    99999999999999999999988732     12   223333333  4877775  8


Q ss_pred             CCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        346 YGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       346 ~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                      .+.+. .++|.++.+ +++.+.... .....+....+.|..|  +..+.+++.++|+.+.++++.++++++.+.+++.++
T Consensus       330 ~lggG~~PigAv~~~-~~i~d~~~~-~~~~~~~~~h~~T~~g--nPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~  405 (504)
T PLN02760        330 ALSSAYMPIGAVLVS-PEISDVIHS-QSNKLGSFAHGFTYSG--HPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIK  405 (504)
T ss_pred             cccCCccccceEeec-HHHHhhhhc-ccccccCcccCCCCCC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            75443 256776665 444432110 0000000001122223  334457888999999888999999999999998887


Q ss_pred             hcC
Q psy10210        425 NLS  427 (435)
Q Consensus       425 ~l~  427 (435)
                      ++.
T Consensus       406 ~l~  408 (504)
T PLN02760        406 AFS  408 (504)
T ss_pred             HHh
Confidence            763

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.63  E-value=3e-14  Score=142.88  Aligned_cols=213  Identities=16%  Similarity=0.133  Sum_probs=151.4

Q ss_pred             ccccccCC---hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH
Q psy10210        137 VSGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY  213 (435)
Q Consensus       137 ~~~~~~~g---~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~  213 (435)
                      ++.+.|-|   +|+++++..+.+.++..+ ...+....+......++.+.+|+++|.+   ..++.++|..|+..++.++
T Consensus       107 FsSndYLGL~~~p~v~~a~~~ai~~yG~g-~~gSrl~~G~~~~h~~LE~~LA~f~g~e---~all~sSGy~AN~~~i~aL  182 (476)
T PLN02955        107 FSGNDYLGLSSHPTISNAAANAAKEYGMG-PKGSALICGYTTYHRLLESSLADLKKKE---DCLVCPTGFAANMAAMVAI  182 (476)
T ss_pred             eeccCccCCCCCHHHHHHHHHHHHHcCCC-CCCcCccccChHHHHHHHHHHHHHHCCC---cEEEECChHHHHHHHHHHH
Confidence            44555555   899999999999886533 3334455667778888889999999875   3578888899999999887


Q ss_pred             HHHhhh----hc-C-CCCCeEEEeCCCchhHHHHHHHc----CCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeC
Q psy10210        214 RDYARE----EK-G-ISLPEIVLPTTAHPAFDKAANYF----GMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSM  280 (435)
Q Consensus       214 ~~~~~~----~~-g-~~~~~viv~~~~~~~~~~~~~~~----g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~  280 (435)
                      ..-...    .+ . -++..|+...-.|.+....++..    ++++..++.     -|+++|++++..   +.++|++..
T Consensus       183 ~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv~Eg  257 (476)
T PLN02955        183 GSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVVTDS  257 (476)
T ss_pred             hhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEEEeC
Confidence            311100    00 0 01234777777999999999887    567777663     378888888753   457888888


Q ss_pred             CCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEe
Q psy10210        281 PNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYR  359 (435)
Q Consensus       281 p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~  359 (435)
                      ..++.|.+.|+++|.++|++||+.+++||+|+.+++   +..|.+... +.. .+.+|+++.++.|.. |..| |+++. 
T Consensus       258 V~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~---G~~G~G~~e~~g~-~~di~ii~~TLsKA~-G~~G-Gfi~g-  330 (476)
T PLN02955        258 LFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC---GENGGGVAEEFNC-EADVDLCVGTLSKAA-GCHG-GFIAC-  330 (476)
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee---cCCCCcHHHHhCC-CCCCcEEEEeCccch-hccC-ceeec-
Confidence            889999999999999999999999999999998876   222333221 222 246799999999994 4443 55444 


Q ss_pred             CCcccc
Q psy10210        360 DLKYKH  365 (435)
Q Consensus       360 ~~~~~~  365 (435)
                      ++++.+
T Consensus       331 s~~~~~  336 (476)
T PLN02955        331 SKKWKQ  336 (476)
T ss_pred             HHHHHH
Confidence            444443

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.63  E-value=4.9e-14  Score=141.82  Aligned_cols=249  Identities=15%  Similarity=0.049  Sum_probs=152.3

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.......      ...+...++.+.++++.+.   +.++++++|++|+..|++.++.....+.+.
T Consensus        57 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~---~~~~~~~sGseA~e~a~klar~~~~~~~~~  127 (403)
T PRK05093         57 CHPALVKALKEQGEKLWHISNV------FTNEPALRLAKKLIDATFA---ERVFFANSGAEANEAAFKLARRYACDRHGP  127 (403)
T ss_pred             CCHHHHHHHHHHHHhcCcccCc------cCCHHHHHHHHHHHhhCCC---CEEEEeCchHHHHHHHHHHHHHHHhhcCCC
Confidence            5899999999988763222110      1123345677777777643   378999999999999999887664332233


Q ss_pred             CCCeEEEeCCCchhHHH-HHHHcC------------CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210        224 SLPEIVLPTTAHPAFDK-AANYFG------------MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM--  288 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~-~~~~~g------------~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~--  288 (435)
                      .+..|+..+.+|++... +....+            .+++.+|.     -|++++++.+.+++++|+++ |.||+|.+  
T Consensus       128 ~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aaiiie-p~~~~gg~~~  201 (403)
T PRK05093        128 EKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAAVKAVIDDHTCAVVVE-PIQGEGGVIP  201 (403)
T ss_pred             CCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----CCHHHHHHHhcCCeEEEEEe-cccCCCCCcc
Confidence            45668877777776432 222211            12233332     27899999998889899888 55666543  


Q ss_pred             ---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        289 ---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       289 ---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                         +.+++|.++|++||+++|+||+|+++..     .|... .........|+.++  .|...+...+|+++.++ ++.+
T Consensus       202 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~-----~g~~~-~~~~~~~~pdi~s~--sK~l~~G~rig~vv~~~-~i~~  272 (403)
T PRK05093        202 ATPEFLQGLRELCDQHNALLIFDEVQTGMGR-----TGDLF-AYMHYGVTPDILTS--AKALGGGFPIGAMLTTA-EIAS  272 (403)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEechhhCCCC-----Cccch-hhhhcCCCCCEEEe--cccccCCcceEEEEEcH-HHHh
Confidence               4599999999999999999999997633     12110 11111112465554  58754445689977654 4433


Q ss_pred             ccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        366 CQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       366 ~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ...   ....+.     +..+  +....+++.++++.+..+.+.++.++..+.+.+.++++
T Consensus       273 ~l~---~~~~~~-----t~~~--~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~  323 (403)
T PRK05093        273 HFK---VGTHGS-----TYGG--NPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKI  323 (403)
T ss_pred             hcC---CCCCCC-----CCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            211   111111     1112  22223455566666655667777777777777776654

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.63  E-value=3e-14  Score=144.42  Aligned_cols=250  Identities=14%  Similarity=0.041  Sum_probs=160.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+....+..     ....+...++.+.++++++... +.++++++|+||+..|++.++....     
T Consensus        58 ~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~tg-----  126 (443)
T PRK08360         58 NNPRVVKAIKEQTDKLIHYTPI-----YGFPVEPLLLAEKLIEIAPGDN-PKVSFGLSGSDANDGAIKFARAYTK-----  126 (443)
T ss_pred             CCHHHHHHHHHHHHhccCcccc-----ccCcHHHHHHHHHHHHhCCCCC-CEEEEcCCHHHHHHHHHHHHHHhcC-----
Confidence            4899999999998864322211     1223556778888888875432 3799999999999999999886532     


Q ss_pred             CCCeEEEeCCCchhHHHH-HHHcCC------------EEEEEecCCCcc------------ccHHHHHHHhh-----cCc
Q psy10210        224 SLPEIVLPTTAHPAFDKA-ANYFGM------------KVKHIRLTSSYT------------VDLAALQSAIT-----GNT  273 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~-~~~~g~------------~v~~vp~~~~~~------------~d~~~l~~~i~-----~~~  273 (435)
                       ++.|+.-...|++.... ....|.            .+..+|......            .+++.+++.+.     +++
T Consensus       127 -r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  205 (443)
T PRK08360        127 -RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV  205 (443)
T ss_pred             -CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence             35688887777774322 222221            233444321111            12445666663     468


Q ss_pred             eEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCC
Q psy10210        274 VMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYG  347 (435)
Q Consensus       274 ~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~  347 (435)
                      ++|+++..++|+|.+    +.+++|.++|++||+++|+||+|++|..     .|.   .+.....  ..|++++  .|.+
T Consensus       206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr-----~G~---~~a~~~~~~~pDiitl--sK~l  275 (443)
T PRK08360        206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGR-----TGK---WFAIEHFGVEPDIITL--GKPL  275 (443)
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Ccc---chhhhhcCCCCCEEEe--cccc
Confidence            899999888999987    3499999999999999999999998633     121   1111111  2377766  5875


Q ss_pred             CccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        348 FTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       348 ~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+...+|+++.+ +++.+..   .....+     .+..+  +....+++.++++.+..+++.+++++..+++++.++++
T Consensus       276 ~~G~pigav~~~-~~i~~~~---~~~~~~-----~T~~~--~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l  343 (443)
T PRK08360        276 GGGLPISATIGR-AEIMDSL---PPLAHA-----FTLSG--NPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEM  343 (443)
T ss_pred             cCCceeEEEEEc-HHHHhhh---cCCCCC-----CCCCc--CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence            444557886665 4444331   111111     12222  22334678888888888888999999988888777655

>PRK07481 hypothetical protein; Provisional

Probab=99.62  E-value=3.4e-14  Score=144.40  Aligned_cols=261  Identities=15%  Similarity=0.076  Sum_probs=165.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+..+....    .....+.+.++.+.++++++.+..+.++++++|+||+..|++.++..... +|.
T Consensus        59 ~~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~-~g~  133 (449)
T PRK07481         59 NREEVKEAIVRQLDELEYYSTF----DGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKV-RGQ  133 (449)
T ss_pred             CCHHHHHHHHHHHHhccceecc----cccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHh-cCC
Confidence            4899999999998864322111    01123556777888888874222247999999999999999999876533 343


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC----cc-ccHHH--------HHHHhh----cC
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS----YT-VDLAA--------LQSAIT----GN  272 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~----~~-~d~~~--------l~~~i~----~~  272 (435)
                       .+.+|+....+|++....+... +-            .+..+|.+..    +. -|+++        +++.+.    ++
T Consensus       134 ~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~  213 (449)
T PRK07481        134 PERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDT  213 (449)
T ss_pred             CCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence             2567888888888855433221 11            1223332211    11 13333        344443    46


Q ss_pred             ceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~  346 (435)
                      +.+|+++......|.+    +.++++.++|++||+++|.||++.||-.     .|   ..+.+...|  .|+++++  |.
T Consensus       214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~a~~~~gv~PDiv~~g--Kg  283 (449)
T PRK07481        214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGR-----TG---SWFGSRGWGVKPDIMCLA--KG  283 (449)
T ss_pred             EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc-----Cc---hhhHhhhcCCCCCEEEEe--ec
Confidence            7899999887767776    4599999999999999999999998733     12   122233334  4888886  76


Q ss_pred             CCcc-CCcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        347 GFTP-KGSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                      +.+. .++|+++.+++ +.+......    ....+++|+     |  +....+++.++++.+.++++.+++++..+++.+
T Consensus       284 l~gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~-----g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~  355 (449)
T PRK07481        284 ITSGYVPLGATMVNAR-IADAFEANADFGGAIMHGYTYS-----G--HPVACAAALATLDIVVREDLPANAAKRGAYLLE  355 (449)
T ss_pred             ccCCCcCceEEEEcHH-HHHHHhccCccccccccCCCCC-----C--CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            5444 35788777653 332210000    011223322     2  222347888999999999999999999999888


Q ss_pred             HHHhcC
Q psy10210        422 CLQNLS  427 (435)
Q Consensus       422 ~~~~l~  427 (435)
                      .++++.
T Consensus       356 ~L~~l~  361 (449)
T PRK07481        356 GLQPLK  361 (449)
T ss_pred             HHHHHh
Confidence            887654

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.62  E-value=8.9e-14  Score=139.89  Aligned_cols=251  Identities=18%  Similarity=0.066  Sum_probs=163.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+.+.....+   .   ...+...++.+.++++++.   +.++++++|++|+..+++.++.....++|+
T Consensus        54 ~~p~v~~a~~~~~~~~~~~~~---~---~~~~~~~~l~~~l~~~~~~---~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~  124 (401)
T TIGR01885        54 CHPKIVKALTEQAQKLTLSSR---A---FYNDVFGEFAEYVTKLFGY---DKVLPMNTGAEAVETAIKLARKWGYKVKGI  124 (401)
T ss_pred             CCHHHHHHHHHHHHhcccccc---c---cCCHHHHHHHHHHHhhcCC---CEEEEeCccHHHHHHHHHHHHHHhhhhcCC
Confidence            489999999999876432221   1   1234456667777787764   278999999999999999998775443343


Q ss_pred             --CCCeEEEeCCCchhH-HHHHHHcCC------------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210        224 --SLPEIVLPTTAHPAF-DKAANYFGM------------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPY  285 (435)
Q Consensus       224 --~~~~viv~~~~~~~~-~~~~~~~g~------------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt  285 (435)
                        .++.|+..+.+|++. ..+....+-            .+..+|.     .|++++++++.   +++.+|+++.+++++
T Consensus       125 ~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~  199 (401)
T TIGR01885       125 PENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEA  199 (401)
T ss_pred             CCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCC
Confidence              256688888787753 333333221            2233332     26888988885   467888899999999


Q ss_pred             ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeC
Q psy10210        286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRD  360 (435)
Q Consensus       286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~  360 (435)
                      |.+.+    +++|.++|++||+++++||+|.++..     .|... .++......|+++++  |.+.++ ..+|+++.+ 
T Consensus       200 G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~-----~G~~~-~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~-  270 (401)
T TIGR01885       200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGR-----TGKLL-CVDHENVKPDIVLLG--KALSGGVYPVSAVLAD-  270 (401)
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----cchhh-HHhhcCCCCCEEEee--ccccCCCCCcEEEEEc-
Confidence            99854    99999999999999999999977532     12110 111112245877766  875433 456775554 


Q ss_pred             CccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        361 LKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       361 ~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +++.+...   ....+     .+..+  +....+++.++++.+..+++.++.+++.+.+++.++++.
T Consensus       271 ~~i~~~~~---~~~~~-----~t~~~--~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~  327 (401)
T TIGR01885       271 DDVMLTIK---PGEHG-----STYGG--NPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP  327 (401)
T ss_pred             HHHHhhcc---CCCCC-----CCCCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcc
Confidence            55543311   11111     12222  233345777888888777888888888888888887763

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.62  E-value=7.2e-15  Score=138.90  Aligned_cols=254  Identities=16%  Similarity=0.142  Sum_probs=161.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      .|++++++.+.-..  ....+..  .    +.-.++.+.+++++|.   ..++|+.+||+++.+++.+.+.++..     
T Consensus        13 ~~~m~eam~~a~~~--~~~~YG~--D----~~~~~~e~~~ae~~g~---~a~~Fv~sGT~aN~lal~~~~~~~~~-----   76 (342)
T COG2008          13 TPEMREALAAANAV--GDDVYGE--D----PTTNALEQRIAELFGK---EAALFVPSGTQANQLALAAHCQPGES-----   76 (342)
T ss_pred             CHHHHHHHHhcccc--CCCCCCC--C----HHHHHHHHHHHHHhCC---ceEEEecCccHHHHHHHHHhcCCCCe-----
Confidence            67888887754321  1112221  2    3344455677888877   37899999999999999999988877     


Q ss_pred             CCeEEEeCCCchhHHHH--HHHcC-CEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHH
Q psy10210        225 LPEIVLPTTAHPAFDKA--ANYFG-MKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIG  292 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~--~~~~g-~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~  292 (435)
                         |++...+|......  .+.++ ...+.+.-.++|.+++++++..+..      .+.+++..+.+|..|++   +.++
T Consensus        77 ---vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~  153 (342)
T COG2008          77 ---VICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELE  153 (342)
T ss_pred             ---EEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHH
Confidence               99999999885543  34443 3333333347899999999998763      24455555555577988   7889


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS  372 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~  372 (435)
                      +|.++|++||++||+|.+--.-...+.   |   ++..-...++|++++++.|.|++|.  |.|++.+.++.+...+...
T Consensus       154 ~i~~~~k~~~l~LHmDGAR~~nA~val---g---~~~~~~~~~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~a~~~rK  225 (342)
T COG2008         154 AISAVCKEHGLPLHMDGARLANALVAL---G---VALKTIKSYVDSVSFCLTKGGGAPV--GAIVFGNRDFAKRARRWRK  225 (342)
T ss_pred             HHHHHHHHhCCceeechHHHHHHHHHc---C---CCHHHHHhhCCEEEEecccCCccee--eeEEEcCHHHHHHHHHHHH
Confidence            999999999999999998654444332   2   2333345689999999999976665  4468888877665333222


Q ss_pred             CCCCCCCCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210        373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNLSDLWLYLP  434 (435)
Q Consensus       373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p  434 (435)
                      . .||.        -|-...++++|.....-+ .-....+...+...+.+.++..+++....|
T Consensus       226 ~-~Ggl--------~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~  279 (342)
T COG2008         226 R-AGGL--------MRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP  279 (342)
T ss_pred             H-hccc--------HhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC
Confidence            2 2322        233334455554432221 122223333345555555665556665544

>PRK06062 hypothetical protein; Provisional

Probab=99.62  E-value=5.5e-14  Score=142.85  Aligned_cols=268  Identities=17%  Similarity=0.071  Sum_probs=169.6

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+++..   +++|++.+++.+.+.+....++      ....+...++.+.++++...+- +.++++++|+
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~------~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs  122 (451)
T PRK06062         50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP------AHANDARSEAARLIAERAPGDL-SKVFFTNGGA  122 (451)
T ss_pred             CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC------ccCCHHHHHHHHHHHHhCCCCC-CEEEEcCChH
Confidence            3445555544443332   3489999999999887433221      1234556677778888874322 4899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-----------EEEEEecCCCcc------cc----
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-----------KVKHIRLTSSYT------VD----  261 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-----------~v~~vp~~~~~~------~d----  261 (435)
                      ||+..|++.++....      +++|+....+|++....+... +.           .+..+|....+.      -|    
T Consensus       123 EAve~AlklAr~~tg------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  196 (451)
T PRK06062        123 DANEHAVRMARLHTG------RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEEC  196 (451)
T ss_pred             HHHHHHHHHHHHhhC------CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHH
Confidence            999999999886532      456888888888855443322 21           122332221111      12    


Q ss_pred             ---HHHHHHHhh----cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        262 ---LAALQSAIT----GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       262 ---~~~l~~~i~----~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                         ++++++.+.    +++.+|++.......|.+.+    +++|.++|++||+++|+||+++||-.     .|   ..+.
T Consensus       197 ~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR-----tG---~~~a  268 (451)
T PRK06062        197 ERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGR-----TG---KWFA  268 (451)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCc-----Cc---HHHH
Confidence               577788775    35788888887776787755    99999999999999999999998632     12   1222


Q ss_pred             CCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHH
Q psy10210        331 FSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA  407 (435)
Q Consensus       331 ~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g  407 (435)
                      +...|  .|+++++  |.+.+. .++|.++.++ ++.+... ......+++|     .|.  ....+++.++++.+..++
T Consensus       269 ~~~~gv~PDi~t~g--K~lggG~~Pigav~~~~-~i~~~~~-~~~~~~~~T~-----~gn--pl~~Aaa~a~L~~l~~~~  337 (451)
T PRK06062        269 IEHFGVVPDLITFA--KGVNSGYVPLGGVAISE-AIAATFA-DRPYPGGLTY-----SGH--PLACAAAVATINAMEEEG  337 (451)
T ss_pred             HHhcCCCCCeeeec--hhhhcCCcCcEEEEEcH-HHHHHhc-cCCCCCCCCC-----CCC--HHHHHHHHHHHHHHHhcC
Confidence            22223  4877765  875554 2577877765 4543211 0111122233     232  334578889999998888


Q ss_pred             HHHHHHHHH-HHHHHHHHhc
Q psy10210        408 QVWICVRYH-FNYKSCLQNL  426 (435)
Q Consensus       408 ~~~~~~~~~-~~~~~~~~~l  426 (435)
                      +.+++++.. +++++.++.+
T Consensus       338 l~~~~~~~G~~~l~~~L~~l  357 (451)
T PRK06062        338 IVENAARIGAEVLGPGLREL  357 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            999998887 4666666554

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.62  E-value=3.4e-14  Score=144.72  Aligned_cols=277  Identities=14%  Similarity=0.075  Sum_probs=176.7

Q ss_pred             CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+.+.   -+++|++.+++.+++.+..+....     ....+.+.++.+.+++++.... +.++++++|+
T Consensus        53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs  126 (460)
T PRK06916         53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL-----GLANVPSILLAEKLIEVVPEGL-KKVFYSDSGA  126 (460)
T ss_pred             CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence            345555554433322   235999999999999874322211     1224556778888888874322 3899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc-----------
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY-----------  258 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~-----------  258 (435)
                      ||+..|++.++..... +|. .+++|+....+|++....+... |-            .+..+|....+           
T Consensus       127 eAve~AlklAr~~~~~-~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~  205 (460)
T PRK06916        127 TAVEIAIKMAFQYWQN-KGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI  205 (460)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence            9999999999876533 343 3567888888888855443322 21            12334322100           


Q ss_pred             -cccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        259 -TVDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       259 -~~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                       .-+++++++.+.   +++.+|++.. .....|.+    +.++++.++|++||+++|.||++.||-.     .|   ..+
T Consensus       206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GR-----tG---~~~  277 (460)
T PRK06916        206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGR-----TG---KMF  277 (460)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCc-----Cc---hhh
Confidence             023566777775   4678888887 46666766    6799999999999999999999988622     12   233


Q ss_pred             CCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCccccccccc----cCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        330 DFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFV----TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       330 d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~----~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      .+...|  .|+++++  |.+.+. .++|+++.++ ++.+....-    ...+.+++|     .|  +....+++.++++.
T Consensus       278 a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~~~~T~-----~g--npl~~aaa~a~l~~  347 (460)
T PRK06916        278 ACEHENVTPDIMTAG--KGLTGGYLPIAITVTTD-EIYNAFYGDYEEQKTFFHGHSY-----TG--NPLGCAVALANLEL  347 (460)
T ss_pred             HHHhcCCCCCeeeee--hhhhcCccccceeeecH-HHHHHhhccccccCccccCCCC-----CC--CHHHHHHHHHHHHH
Confidence            333334  4888775  764444 3678867665 433221000    011122232     22  23334788889999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +..+++.++++++.+++.+.++++.+
T Consensus       348 l~~~~l~~~~~~~g~~l~~~l~~l~~  373 (460)
T PRK06916        348 YEKTNLIEQVARKTEYVATQLEDLFA  373 (460)
T ss_pred             HHhccHHHHHHHHHHHHHHHHHHhhc
Confidence            98889999999999999988887643

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.61  E-value=5.1e-14  Score=143.43  Aligned_cols=276  Identities=13%  Similarity=0.027  Sum_probs=176.3

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+++..   +++|++.+++.+++.+..+....     ....+...++.+.+++++.... +.++++++|+
T Consensus        44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs  117 (466)
T PRK07030         44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA-----GFSHEPVIELSERLVKITPPGL-SRCFYADNGS  117 (466)
T ss_pred             CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc-----ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence            3445555444333222   24899999999998874322211     1234566778888888774222 4899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc-----------
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY-----------  258 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~-----------  258 (435)
                      ||+..|++.++..... +|. .+++|+....+|++....+... |.            .+..+|....+           
T Consensus       118 EAve~AlKlAr~~~~~-~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~  196 (466)
T PRK07030        118 SAIEVALKMSFHYWRN-RGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEH  196 (466)
T ss_pred             HHHHHHHHHHHHHHHH-hCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHH
Confidence            9999999999876543 342 3567888888888855443322 21            12333322111           


Q ss_pred             -cccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        259 -TVDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       259 -~~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                       .-+++++++.+.   +++.+|+++. .+...|.+    +.+++|.++|++||+++|.||++.||-.        ....+
T Consensus       197 ~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGR--------tG~~~  268 (466)
T PRK07030        197 SRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGR--------TGTMF  268 (466)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc--------cccch
Confidence             013566777775   4678888887 46656765    6699999999999999999999998732        12233


Q ss_pred             CCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccc----cCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        330 DFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFV----TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       330 d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~----~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      .+...|+  |+++++  |.+.+. ..+|.++.++ ++.+.....    .....+++|+..+       .+.+++.++++.
T Consensus       269 a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~h~~T~~gnp-------la~aaa~a~L~~  338 (466)
T PRK07030        269 ACEQAGIRPDFLCLS--KALTGGYLPLAAVLTTD-TVYQAFYDDYPTLRAFLHSHSYTGNP-------LACAAALATLDI  338 (466)
T ss_pred             HHHhcCCCCCEEeee--hhccCCcccceEEEecH-HHHHHHhcccccccccccCCCCCCCH-------HHHHHHHHHHHH
Confidence            3333344  888886  765555 3678866654 443221000    0112333333222       234788899999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +.++++.++++++.+++++.++++.
T Consensus       339 i~~~~l~~~~~~~G~~l~~~L~~l~  363 (466)
T PRK07030        339 FEQDNVIENNRALARRMAEATAHLA  363 (466)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998888764

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.61  E-value=6.5e-14  Score=141.95  Aligned_cols=279  Identities=16%  Similarity=0.121  Sum_probs=172.7

Q ss_pred             CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+.++   -+++|++.+++.+.+++..+...+     ....+.+.++.+.+++++...- +.+.++++|+|
T Consensus        44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-----~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGse  117 (442)
T PRK13360         44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF-----QMGHPKAFELANRIAEIAPGGL-NHVFFTNSGSE  117 (442)
T ss_pred             CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC-----CcCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHH
Confidence            34455544333222   235899999999998864333221     1123555678888888874222 37999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cC------------CEEEEEecCCC-----ccc-----
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FG------------MKVKHIRLTSS-----YTV-----  260 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g------------~~v~~vp~~~~-----~~~-----  260 (435)
                      |+..|++.++..... +|. .+++||....+|++....+.. .|            ..+..+|...+     +..     
T Consensus       118 A~e~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  196 (442)
T PRK13360        118 SVDTALKIALAYHRA-RGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH  196 (442)
T ss_pred             HHHHHHHHHHHHHHh-cCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence            999999999876432 332 256799888888885433221 11            12333443211     100     


Q ss_pred             ---cHHHHHHHhh----cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        261 ---DLAALQSAIT----GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       261 ---d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                         ..+++++++.    +++.+|+++......|.+.+    +++|.++|++||+++|+||++.||-.     .|   ..+
T Consensus       197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Gr-----tG---~~~  268 (442)
T PRK13360        197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGR-----LG---APF  268 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC-----Cc---cch
Confidence               2457777774    45778888888777788855    99999999999999999999987632     12   223


Q ss_pred             CCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        330 DFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       330 d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                      .+...|+  |+++++  |.+.+. ..+|.++.++ ++.+.. ...+......+.+.+..+  +....+++.++++.+..+
T Consensus       269 a~~~~gv~PDivt~g--K~l~gG~~P~gav~~~~-~i~~~~-~~~~~~~~~~~~~~T~~g--~pl~~aaa~a~L~~l~~~  342 (442)
T PRK13360        269 AAQYFGVTPDLLTCA--KGLTNGAIPMGAVFVSS-EIHDAF-MQGPEAGIEFFHGYTYSG--HPLACAAALATLDLYERE  342 (442)
T ss_pred             hhhhcCCCCceeeee--eccccCccceEEEEEcH-HHHHHh-hcCCccccccccCCCCCC--CHHHHHHHHHHHHHHHhC
Confidence            3333343  777665  865433 3467766654 433221 001100000001122333  333457888899999888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC
Q psy10210        407 AQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++.++++++.+++++.++++.
T Consensus       343 ~l~~~~~~~g~~l~~~l~~l~  363 (442)
T PRK13360        343 GLLTRAARLAPYWEDALHSLR  363 (442)
T ss_pred             CHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999888887654

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.61  E-value=3.1e-14  Score=142.03  Aligned_cols=246  Identities=13%  Similarity=0.028  Sum_probs=152.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.....      .....+++.++.+++++..+.   +.++++++|++|+..|++.++....     
T Consensus        46 ~~p~v~~a~~~~~~~~~~~~------~~~~~~~~~~la~~l~~~~~~---~~~~~~~sG~~a~~~A~~~a~~~~g-----  111 (377)
T PRK02936         46 CHPTVTKAVQEQLDDIWHVS------NLFTNSLQEEVASLLAENSAG---DLVFFCNSGAEANEAALKLARKHTG-----  111 (377)
T ss_pred             CCHHHHHHHHHHHHhccccc------cccCCHHHHHHHHHHHhcCCC---CEEEEeCCcHHHHHHHHHHHHHhcC-----
Confidence            58999999999987632211      112346777777777776643   3789999999999999997654321     


Q ss_pred             CCCeEEEeCCCchhHH-HHHHHcCCEEE---EEecCCC--c--cccHHHHHHHhhcCceEEEEeCCCCCcccc----cCH
Q psy10210        224 SLPEIVLPTTAHPAFD-KAANYFGMKVK---HIRLTSS--Y--TVDLAALQSAITGNTVMLVGSMPNFPYGTM----DDI  291 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~-~~~~~~g~~v~---~vp~~~~--~--~~d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~i  291 (435)
                       +++|++.++.|++.. ......+....   ..|..++  .  .-|++++++.+.+++++|+++.++++.|..    +++
T Consensus       112 -~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l  190 (377)
T PRK02936        112 -KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFL  190 (377)
T ss_pred             -CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHH
Confidence             235888888877533 22322222110   1111110  0  127899999998889999999999988876    459


Q ss_pred             HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210        292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF  369 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~  369 (435)
                      ++|.++|++||+++|+||+|.++...     |.   ++.+...+  .|+++  +.|.+.+...+|+++. ++++.+..  
T Consensus       191 ~~l~~l~~~~~~~lI~DEv~~g~g~~-----g~---~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~-~~~~~~~~--  257 (377)
T PRK02936        191 QEVQTLCKKFGALLIIDEVQTGIGRT-----GT---LFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIG-KKELGTAF--  257 (377)
T ss_pred             HHHHHHHHHcCCEEEEeccccCCCcC-----ch---hhHHHhhCCCCcEEE--EcccccCCCccEEEEE-cHHHHhhc--
Confidence            99999999999999999999876331     21   11111112  36554  5688544345788554 45554331  


Q ss_pred             ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                       .......     +..  -+....+++.++++.+..+.+.+++++..+.+.+.+++
T Consensus       258 -~~~~~~~-----t~~--~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~  305 (377)
T PRK02936        258 -GPGSHGS-----TFG--GNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQE  305 (377)
T ss_pred             -cCCCCCC-----CCC--CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence             1111111     111  12233456667777765556667777777766666654

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.61  E-value=5.9e-14  Score=128.25  Aligned_cols=222  Identities=15%  Similarity=0.139  Sum_probs=144.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|..-+--++..+.+...+... ..+.+....|...+|...+.+++++.+++....|                 
T Consensus        33 imLggGNPa~iPem~~~f~~~~aemla~-~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwn-----------------   94 (417)
T COG3977          33 IMLGGGNPARIPEMDDYFQDLLAEMLAS-GKATEALCNYDGPQGKAVLIDALAKMLRREYGWN-----------------   94 (417)
T ss_pred             eeeCCCCcccChhHHHHHHHHHHHHHhc-chHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCC-----------------
Confidence            4455566765333344444443322221 1233456667777888888899888888765443                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEE------EEEec
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV------KHIRL  254 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v------~~vp~  254 (435)
                               ..+ .++.+|+|++.+.+.+...+..+.  ..|..+..++--.|.|.+|..+.-.-.+-|      ..+|-
T Consensus        95 ---------it~-~NIalTnGSQs~fFYlfNlF~G~~--sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~  162 (417)
T COG3977          95 ---------ITA-QNIALTNGSQSAFFYLFNLFAGRR--SDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPA  162 (417)
T ss_pred             ---------Ccc-ceeeecCCccchHHHHHHHhcCcc--CCCcceeEeeccChhhccccccccCccceeeccCCcccccc
Confidence                     123 489999999999999888764322  234334445555788888765533222211      11111


Q ss_pred             C-CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        255 T-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       255 ~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                      . -.+++|.+++.  +.+.+.+|+++-|+||||.+   +++.+|.++|++||+++++|.+|+-           +.|.+-
T Consensus       163 g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-----------PFP~ii  229 (417)
T COG3977         163 GQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-----------PFPGII  229 (417)
T ss_pred             cceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-----------CCCcee
Confidence            1 13578888775  45789999999999999999   7899999999999999999999963           222333


Q ss_pred             CCCC-----CccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        331 FSLP-----GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       331 ~~~~-----gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      |++.     .--+.++|.+|.|+....+|+ ++.++++.+.
T Consensus       230 fsd~~~~w~~NiilC~SLSK~GLPG~R~GI-iIane~viqa  269 (417)
T COG3977         230 FSDATPLWNENIILCMSLSKLGLPGSRCGI-IIANEKVIQA  269 (417)
T ss_pred             cccccccCCCCEEEEeehhhcCCCCcceeE-EEccHHHHHH
Confidence            3321     125778899999877788999 4555555543

>PRK06917 hypothetical protein; Provisional

Probab=99.61  E-value=5.4e-14  Score=142.73  Aligned_cols=275  Identities=15%  Similarity=0.067  Sum_probs=172.1

Q ss_pred             CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...+++.   -+++|++.+++.+++.+..+...     .....+...++.+.+++++.... +.++++++|||
T Consensus        29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGsE  102 (447)
T PRK06917         29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-----SQFTSEPAEKLAKKLSDLSPGDL-NWSFFVNSGSE  102 (447)
T ss_pred             CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-----cccCCHHHHHHHHHHHHhCCCCC-CEEEEeCChHH
Confidence            44455544333222   23489999999999887422211     11224566778888888875432 37999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCcc-----------
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSYT-----------  259 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~~-----------  259 (435)
                      |++.|++.++..... +|. .+++|+....+|++....+.. .+.            .+..+|......           
T Consensus       103 Ave~AlklAr~~~~~-rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  181 (447)
T PRK06917        103 ANETAMKIAIQHFQE-RGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ  181 (447)
T ss_pred             HHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence            999999999876543 443 356788888888885544322 221            112232211000           


Q ss_pred             -ccHHHHHHHhh----cCceEEEEeCCCCCcc-cc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        260 -VDLAALQSAIT----GNTVMLVGSMPNFPYG-TM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       260 -~d~~~l~~~i~----~~~~~v~~~~p~nptG-~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                       -+++.+++.++    +++.+|+++......| .+    +.+++|.++|++||+++|+||++.||-.     .|   ..+
T Consensus       182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGR-----tG---~~~  253 (447)
T PRK06917        182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGR-----TG---AMF  253 (447)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCc-----cc---chh
Confidence             13456777775    3578888887655333 44    6699999999999999999999988632     12   223


Q ss_pred             CCCCCC--ccEEEecCCCCCCccC-CcEEEEEeCCcccccccccc-CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210        330 DFSLPG--VTSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQYFVT-SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF  405 (435)
Q Consensus       330 d~~~~g--vd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~~~~~-~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~  405 (435)
                      .+...|  .|+++++  |.+.+.. ++|+++.++ ++.+...... ..+.+++|+     |  +...++++.++++.+.+
T Consensus       254 a~~~~gv~PDi~~~g--K~l~~G~~Pi~a~~~~~-~i~~~~~~~~~~~~~~~T~~-----g--npl~~aaa~a~l~~l~~  323 (447)
T PRK06917        254 AMEHWGVEPDIMTLG--KGLGAGYTPIAATVVSD-RVMEPILRGSRSIMSGHTLS-----A--NPLSAATALAVLEYMEK  323 (447)
T ss_pred             hHHhcCCCCCEEEee--ehhccCCcceEEEEEcH-HHHHHHhccCcccccccCCC-----C--CHHHHHHHHHHHHHHHH
Confidence            222333  4887775  8755543 577767664 4433211000 111233322     2  22334788899999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Q psy10210        406 EAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       406 ~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +++.+++++..+++.+.++++.
T Consensus       324 ~~l~~~~~~~g~~l~~~L~~l~  345 (447)
T PRK06917        324 HNLPEKAAEKGEYLIKGLQKVQ  345 (447)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999888887764

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.61  E-value=7.3e-14  Score=140.64  Aligned_cols=266  Identities=13%  Similarity=0.075  Sum_probs=165.7

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC--CCCceEE-cCC
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG--PETCGCM-TSG  201 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~--~~~~~~~-t~g  201 (435)
                      ++..|.+...++++.   +++|++.+++.+.+.+......     .....+...++.+.+++++..+  ....+.+ +++
T Consensus        33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-----~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  107 (412)
T TIGR02407        33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS-----LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT  107 (412)
T ss_pred             CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceec-----cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence            344454443333333   3589999999999875322211     1122455667777777765222  1124555 589


Q ss_pred             hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc---cccHHHH
Q psy10210        202 GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY---TVDLAAL  265 (435)
Q Consensus       202 gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~---~~d~~~l  265 (435)
                      |+||+..|++.++....      +++|+....+|++....+... |.            .+..+|.+...   .-+++.+
T Consensus       108 GseA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l  181 (412)
T TIGR02407       108 GTNAVESALKLARKVTG------RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYF  181 (412)
T ss_pred             chHHHHHHHHHHhhhcC------CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHH
Confidence            99999999999986532      456888888888865443322 21            23344432100   1246778


Q ss_pred             HHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC-
Q psy10210        266 QSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-  334 (435)
Q Consensus       266 ~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-  334 (435)
                      ++.+.      +++.+|++....++.|.+    +.+++|.++|++||+++|+||+++||-.     .|   ..+.+... 
T Consensus       182 ~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR-----tG---~~~a~~~~~  253 (412)
T TIGR02407       182 EKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGR-----TG---TFFSFEPAG  253 (412)
T ss_pred             HHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----cc---hhHHhcccC
Confidence            88885      356888888888888875    6799999999999999999999987732     12   11122112 


Q ss_pred             -CccEEEecCCCCCCc-cCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH-hcHHHHHHH
Q psy10210        335 -GVTSISVDTHKYGFT-PKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY-FGFEAQVWI  411 (435)
Q Consensus       335 -gvd~~~~s~hK~~~~-p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~-~g~~g~~~~  411 (435)
                       ..|+++++  |++.+ ...+|+++.+++ + .. +  .+...+++|     .+  +....+++.+++.. +..+++.++
T Consensus       254 v~PDi~~~~--K~lg~~G~pigav~~~~~-~-~~-~--~~~~~~~T~-----~g--npl~~aaa~a~l~~~i~~~~l~~~  319 (412)
T TIGR02407       254 IEPDIVCLS--KSISGYGLPLALTLIKPE-L-DV-W--KPGEHNGTF-----RG--NNLAFVTATAALEYYWSDDAFEKA  319 (412)
T ss_pred             CCCCEEEec--hhccCCccceeEEEEchh-h-hc-c--CCCccCCCC-----Cc--cHHHHHHHHHHHHHHhcccHHHHH
Confidence             34777765  98544 456899877654 3 21 1  112222222     12  22233566788885 777889999


Q ss_pred             HHHHHHHHHHHHHhc
Q psy10210        412 CVRYHFNYKSCLQNL  426 (435)
Q Consensus       412 ~~~~~~~~~~~~~~l  426 (435)
                      ++++.+.+++.++.+
T Consensus       320 ~~~~g~~l~~~l~~l  334 (412)
T TIGR02407       320 VQRKSEIIQERLDRI  334 (412)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999888888777653

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK07678 aminotransferase; Validated

Probab=99.61  E-value=7.3e-14  Score=142.04  Aligned_cols=272  Identities=15%  Similarity=0.080  Sum_probs=171.8

Q ss_pred             CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...+++.   -+++|++.+++.+++.+......      ....+...++.+.++++++..  ..++++++|+
T Consensus        44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~------~~~~~~~~~lae~l~~~~~~~--~~v~f~~sGs  115 (451)
T PRK07678         44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL------TQSHEPAIKLAEKLNEWLGGE--YVIFFSNSGS  115 (451)
T ss_pred             CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc------ccCCHHHHHHHHHHHHhCCCC--CEEEEeCCcH
Confidence            344555554433222   23489999999999886432211      112345667888888887543  3799999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccc---------
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTV---------  260 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~---------  260 (435)
                      ||++.|++.++..... +|. .+++|+....+|++....+... |.            .+..+|.......         
T Consensus       116 eA~e~AlklAr~~t~~-~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (451)
T PRK07678        116 EANETAFKIARQYHAQ-KGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY  194 (451)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence            9999999999876543 343 3567888888888855443322 11            2233433211111         


Q ss_pred             c---HHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        261 D---LAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       261 d---~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      |   ++.+++.+.    +++.+|+++......|.+    +.++++.++|++||+++|+||++.||-.     .|   ..+
T Consensus       195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~  266 (451)
T PRK07678        195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGR-----TG---KAF  266 (451)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCc-----Cc---hhH
Confidence            1   233566664    467889888877666766    4599999999999999999999988733     12   122


Q ss_pred             CCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        330 DFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       330 d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      .+...|  .|+++++  |.+.+. .++|.++.+++ +.+......   ..+.+++|+.       +....+++.++++.+
T Consensus       267 ~~~~~gv~PDivt~g--K~lggG~~Pi~av~~~~~-i~~~~~~~~~~~~~~h~~T~~g-------np~~~aaa~a~l~~l  336 (451)
T PRK07678        267 GFMNYGVKPDIITMA--KGITSAYLPLSATAVKKE-IYEAFKGKGEYEHFRHVNTFGG-------NPAACALALKNLEIM  336 (451)
T ss_pred             HHHhcCCCCCEEEee--cccccCCcceeEEEEcHH-HHHHHhccCcccccccCCCCCc-------CHHHHHHHHHHHHHH
Confidence            222234  4888875  865444 46788777654 332210000   0122333322       223447888999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHh
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .++++.+++++..+++++.+++
T Consensus       337 ~~~~~~~~~~~~g~~l~~~l~~  358 (451)
T PRK07678        337 ENENLIERSAQLGELLLEQLKE  358 (451)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHH
Confidence            8889999999998888877754

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.60  E-value=7.1e-14  Score=132.99  Aligned_cols=227  Identities=15%  Similarity=0.112  Sum_probs=160.6

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH---HHHcC-
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA---ANYFG-  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~---~~~~g-  246 (435)
                      ..+-++|..+++...++||++.. ++-.. +|+.|+..+..++.+++|+        |+-.+-.|.++..-   ....| 
T Consensus        68 e~VD~vE~laierak~LFga~~a-nVQPh-SGs~AN~av~~All~pGDt--------imgm~l~~GGHltHg~~v~~sG~  137 (413)
T COG0112          68 EYVDEVEELAIERAKKLFGAEYA-NVQPH-SGSQANQAVYLALLQPGDT--------IMGLDLSHGGHLTHGSPVNFSGK  137 (413)
T ss_pred             eeHHHHHHHHHHHHHHHhCCCcc-ccCCC-CchHHHHHHHHHHcCCCCe--------EecccCCCCCcccCCCCCCccce
Confidence            45668888888899999999765 55544 5589999999999999998        77666655543222   22223 


Q ss_pred             -CEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        247 -MKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       247 -~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                       .+.+..|+| +++.+|.|++++.+.+ ++++|+.-.-.+|  ..-|++++.++|++.|.++.+|.+|-.++..    .|
T Consensus       138 ~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~--r~id~~~~reIad~VGA~L~~DmAHiaGLVA----~G  211 (413)
T COG0112         138 LFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS--RPIDFKRFREIADEVGAYLMVDMAHVAGLIA----GG  211 (413)
T ss_pred             eEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccc--cccCHHHHHHHHHHhCceEEehHHHHHHHHh----cc
Confidence             356677788 7799999999998764 7888876543332  3479999999999999999999999777663    23


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc-ccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF-VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~-~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      .-..|+.    .+|+++.++||++.||.| |+|+++++++.+.... ..|.++||          .--..+|+...++..
T Consensus       212 ~~p~P~~----~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~qgg----------pl~HviAakaVa~~E  276 (413)
T COG0112         212 VHPNPLP----HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGLQGG----------PLMHVIAAKAVAFKE  276 (413)
T ss_pred             cCCCCCC----ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCccCCC----------hHHHHHHHHHHHHHH
Confidence            2222333    389999999999999987 8889888676554322 33444433          222345555556666


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ....+|++..+++.++++.+.+.|.+
T Consensus       277 al~p~fk~Ya~qVv~NAkaLAe~l~~  302 (413)
T COG0112         277 ALEPEFKEYAKQVVKNAKALAEALKE  302 (413)
T ss_pred             HcChhHHHHHHHHHHHHHHHHHHHHH
Confidence            66677777777777777777666543

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.60  E-value=6.6e-14  Score=142.61  Aligned_cols=276  Identities=12%  Similarity=0.001  Sum_probs=174.3

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC----CCCceEEcC
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG----PETCGCMTS  200 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~----~~~~~~~t~  200 (435)
                      ++..|.+...+.+..   +++|++.+++.++.++.......     ....+...++.+.+++++...    .-+.+++++
T Consensus        62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~  136 (472)
T PRK08742         62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-----GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYAD  136 (472)
T ss_pred             CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-----ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeC
Confidence            444555443333332   34899999999988753322111     112345667778888877431    124899999


Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCcc-------
Q psy10210        201 GGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYT-------  259 (435)
Q Consensus       201 ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~-------  259 (435)
                      +|+||+..|++.++..... +|. .+.+||....+|++....+... +.            .+..+|....+.       
T Consensus       137 sGSEAvE~AlKlAr~~~~~-~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~  215 (472)
T PRK08742        137 NGSAGVEVALKMAFHYFHN-RGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA  215 (472)
T ss_pred             CchHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCH
Confidence            9999999999999887544 343 3567998888888855443322 11            123344321111       


Q ss_pred             -----ccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        260 -----VDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       260 -----~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                           .+++.+++.+.   +++.+|+++. .....|.+    +.++++.++|++||+++|.||++.||-.        ..
T Consensus       216 ~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGR--------tG  287 (472)
T PRK08742        216 EDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGR--------TG  287 (472)
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC--------Cc
Confidence                 13566777774   4677888877 46656765    6799999999999999999999998733        22


Q ss_pred             CCCCCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHH
Q psy10210        327 PPFDFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAM  400 (435)
Q Consensus       327 ~~~d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l  400 (435)
                      ..+.+...|+  |+++++  |.+.+. .++|.++.+++ +.+......   ....+++|     .|  ...+.+++.+++
T Consensus       288 ~~~a~e~~gv~PDiv~~g--Kgl~gG~~Plaav~~~~e-i~~~~~~~~~~~~~~h~~T~-----~g--npl~~Aaa~a~L  357 (472)
T PRK08742        288 TLFACEQAGVMPDLLCLS--KGLTGGFLPLSAVLATQQ-LYDAFLDDSRERAFLHSHSY-----TG--NPLACAAALATL  357 (472)
T ss_pred             cchHHHhcCCCCCEEEEc--ccccCCCCCcceeeccHH-HHHHhhccCccCccCcCCCC-----Cc--cHHHHHHHHHHH
Confidence            2333433444  888886  875554 36788676654 332210000   01122222     22  223347888999


Q ss_pred             HHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        401 MYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       401 ~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +.+.++++.+++++..++++.+++.+.
T Consensus       358 ~~i~~~~l~~~~~~~g~~l~~~~~~~~  384 (472)
T PRK08742        358 DIFADDDVIARNQPTAARMTQLAAQIG  384 (472)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998887776654

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.60  E-value=9.5e-14  Score=140.14  Aligned_cols=269  Identities=15%  Similarity=0.049  Sum_probs=167.6

Q ss_pred             CCCCCCCCCccccc---ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGA---VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~---~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...+++   .-+++|++.+++.+.+.+..+...     .....+...++.+.+++++.....+.++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGs  111 (425)
T PRK07495         37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-----QVVPYENYVRLAERLNALVPGDFAKKTIFVTTGA  111 (425)
T ss_pred             CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-----CccCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence            34455544433322   223589999999999886432211     1122345566777888877533224799999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C-------------CEEEEEecCCCc-cc----cHHH
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G-------------MKVKHIRLTSSY-TV----DLAA  264 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g-------------~~v~~vp~~~~~-~~----d~~~  264 (435)
                      ||+..|++.++....      +++|+....+|++....+... |             ..+..+|.+.+. ..    ++++
T Consensus       112 eA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  185 (425)
T PRK07495        112 EAVENAVKIARAATG------RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAA  185 (425)
T ss_pred             HHHHHHHHHHHHhhC------CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHH
Confidence            999999999886522      456888888888854333221 1             123445543211 12    2455


Q ss_pred             HHHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        265 LQSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       265 l~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      +++.+.     +++++|+++.....+|.+    +.+++|.++|++||+++|+||+++||..     .|   ..+.+...|
T Consensus       186 l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr-----~G---~~~a~~~~g  257 (425)
T PRK07495        186 LDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFAR-----TG---KLFAMEHHE  257 (425)
T ss_pred             HHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCc-----CC---CceeecccC
Confidence            677664     357788888666557754    5699999999999999999999987633     12   122232233


Q ss_pred             --ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH
Q psy10210        336 --VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV  413 (435)
Q Consensus       336 --vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~  413 (435)
                        .|+++++  |.+.+...+|+++.++ ++.+..   .+...+++|     .+  +....+++.++++.+..+++.++++
T Consensus       258 v~pDi~tls--K~l~~G~pigav~~~~-~i~~~~---~~~~~~~T~-----~~--~pl~~aaa~a~l~~l~~~~l~~~~~  324 (425)
T PRK07495        258 VAADLTTMA--KGLAGGFPLAAVTGRA-EIMDAP---GPGGLGGTY-----GG--NPLGIAAAHAVLDVIEEEDLCERAN  324 (425)
T ss_pred             CCCCEEeeh--hhhcCCccceEEEEcH-HHHhcc---CCCCcCCCC-----CC--CHHHHHHHHHHHHHHHhchHHHHHH
Confidence              3666664  8755556678867654 443321   111222222     22  2223466778899998888999999


Q ss_pred             HHHHHHHHHHHhcC
Q psy10210        414 RYHFNYKSCLQNLS  427 (435)
Q Consensus       414 ~~~~~~~~~~~~l~  427 (435)
                      +..+++++.++.+.
T Consensus       325 ~~g~~l~~~L~~l~  338 (425)
T PRK07495        325 QLGNRLKQRLASLR  338 (425)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99998888777653

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.60  E-value=2e-14  Score=142.15  Aligned_cols=209  Identities=22%  Similarity=0.181  Sum_probs=141.7

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH----HcC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN----YFG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~----~~g  246 (435)
                      |....+|    +.++++.|+   +.++++++|..|+..++.++..+++.        |+++...|.+....++    .+|
T Consensus        55 Pt~~~le----~~la~Le~g---~~a~~~~SGmaAi~~~l~~ll~~Gd~--------iv~~~~~Y~~t~~~~~~~l~~~g  119 (386)
T PF01053_consen   55 PTVRALE----QRLAALEGG---EDALLFSSGMAAISAALLALLKPGDH--------IVASDDLYGGTYRLLEELLPRFG  119 (386)
T ss_dssp             HHHHHHH----HHHHHHHT----SEEEEESSHHHHHHHHHHHHS-TTBE--------EEEESSSSHHHHHHHHHCHHHTT
T ss_pred             ccHHHHH----HHHHHhhcc---cceeeccchHHHHHHHHHhhcccCCc--------eEecCCccCcchhhhhhhhcccC
Confidence            4444444    355666766   25788899999999999999888877        9999999999665554    469


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC-CcEEEeccccchhhhcccccCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG-IPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~-~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +++..++.     -|+++++++++++|++|++..|+||+..+.|+++|+++|+++| ++++||..++..+.         
T Consensus       120 v~v~~~d~-----~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~---------  185 (386)
T PF01053_consen  120 VEVTFVDP-----TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN---------  185 (386)
T ss_dssp             SEEEEEST-----TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT---------
T ss_pred             cEEEEeCc-----hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee---------
Confidence            99988864     3799999999999999999999999999999999999999998 99999999865422         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeC-CccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRD-LKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~-~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                         ++....|+|++..|..||..|...  .|+++.++ +++.+...... ...|.          -.  ....+|..++ 
T Consensus       186 ---~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-~~~G~----------~~--~p~da~ll~r-  248 (386)
T PF01053_consen  186 ---QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-RLLGA----------TL--SPFDAWLLLR-  248 (386)
T ss_dssp             ---C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-HHHT-----------B----HHHHHHHHH-
T ss_pred             ---eccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh-hhcCc----------cc--hHHHHHHHhc-
Confidence               222344899999999999654432  46766665 34433211111 11111          11  1135665554 


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       |...+.-|+++..+.+.+..+.|
T Consensus       249 -gl~Tl~~R~~~~~~nA~~lA~~L  271 (386)
T PF01053_consen  249 -GLRTLPLRMERQNENAEALAEFL  271 (386)
T ss_dssp             -HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHH
Confidence             55666667776666665554444

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK07483 hypothetical protein; Provisional

Probab=99.60  E-value=9.8e-14  Score=140.67  Aligned_cols=257  Identities=14%  Similarity=0.085  Sum_probs=164.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC-
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG-  222 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g-  222 (435)
                      ++|++.+++.+.+.+..+.+...     ...+...++.+.+++++.... +.++++++|+||+..|++.++..... +| 
T Consensus        47 ~~p~v~~av~~ql~~~~~~~~~~-----~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~~~~-~g~  119 (443)
T PRK07483         47 SHPRVIAAIHAQIDRLAYAHTSF-----FTTEPAEALADRLVAAAPAGL-EHVYFVSGGSEAVEAALKLARQYFVE-IGQ  119 (443)
T ss_pred             CCHHHHHHHHHHHHhccCccccc-----cCCHHHHHHHHHHHHhCCCCC-CEEEEcCCcHHHHHHHHHHHHHHHHh-cCC
Confidence            48999999999988643222211     123455677778888774222 38999999999999999999877543 34 


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccc-------------cHHHHHHHhh----cC
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTV-------------DLAALQSAIT----GN  272 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~-------------d~~~l~~~i~----~~  272 (435)
                      ..+++|+....+|++....+... |-            .+..+|....+..             .++++++++.    ++
T Consensus       120 ~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  199 (443)
T PRK07483        120 PQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDT  199 (443)
T ss_pred             CCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence            23567888888888854333221 11            1223332111110             1356666564    46


Q ss_pred             ceEEEEeCCCCC-cccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCC
Q psy10210        273 TVMLVGSMPNFP-YGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHK  345 (435)
Q Consensus       273 ~~~v~~~~p~np-tG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK  345 (435)
                      +.+|++...... .|.+    +.++++.++|++||+++|.||++.||-.        ....+.+...|  .|+++++  |
T Consensus       200 iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGR--------tG~~~a~~~~gv~PDiv~~g--K  269 (443)
T PRK07483        200 VAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR--------TGTLFACEEDGVAPDLVTIA--K  269 (443)
T ss_pred             eEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCccc--------CcHHHHHhhcCCCCCeeeeh--h
Confidence            788888877642 3655    4599999999999999999999998833        12233333333  4888876  7


Q ss_pred             CCCccC-CcEEEEEeCCccccccccccCC--CCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q psy10210        346 YGFTPK-GSSVVLYRDLKYKHCQYFVTSD--WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSC  422 (435)
Q Consensus       346 ~~~~p~-g~g~il~~~~~~~~~~~~~~~~--~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~  422 (435)
                      .+.+.. ++|.++.+++ +.+... ..+.  ..+++|+..+       .+.+++.++++.+.++++.+++++..+++++.
T Consensus       270 ~l~gG~~Pi~av~~~~~-i~~~~~-~~~~~~~h~~T~~gnp-------l~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~  340 (443)
T PRK07483        270 GLGAGYQPIGAVLASDR-IYDAIA-DGSGFFQHGHTYLGHA-------TACAAALAVQRVIAEDGLLANVRARGEQLRAR  340 (443)
T ss_pred             hhccCccccEEEEEcHH-HHHHHh-cCCCccccCCCCCCCH-------HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            655553 6788777654 332210 0111  1233332222       23468889999999999999999999998888


Q ss_pred             HHhc
Q psy10210        423 LQNL  426 (435)
Q Consensus       423 ~~~l  426 (435)
                      ++++
T Consensus       341 L~~l  344 (443)
T PRK07483        341 LRER  344 (443)
T ss_pred             HHHH
Confidence            8754

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.60  E-value=2.8e-14  Score=140.23  Aligned_cols=228  Identities=14%  Similarity=0.111  Sum_probs=144.0

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH---HHHH---
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---DKAA---  242 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~---~~~~---  242 (435)
                      ..+.++|.-+++.+.++||+++..+.  +=..+|+.|+..++.++.+++|+        |+..+..+.++   ....   
T Consensus        62 ~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~--------Im~l~l~~GGHlshg~~~~~~  133 (399)
T PF00464_consen   62 EYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDT--------IMGLSLPHGGHLSHGSSVNFK  133 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-E--------EEEEEGGGT--GGGT-TTSHS
T ss_pred             chhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCc--------EEecChhhccccccccccccc
Confidence            34567778888899999999855322  33368899999999999999998        87777654432   2221   


Q ss_pred             ----HHcCCEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210        243 ----NYFGMKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA  316 (435)
Q Consensus       243 ----~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~  316 (435)
                          .-...+.+.+++| +++.+|.+++++.+.+ ++++|++..-++|  ...|++++.++|++.|.++++|.+|-.++.
T Consensus       134 ~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLI  211 (399)
T PF00464_consen  134 KISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLI  211 (399)
T ss_dssp             BSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHH
T ss_pred             ccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccce
Confidence                2234578888998 7899999999998864 8899988766554  346899999999999999999999988776


Q ss_pred             hcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEe-------------CCccccccc-cccCCCCCCCCCCC
Q psy10210        317 PFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYR-------------DLKYKHCQY-FVTSDWPGGNYGSP  382 (435)
Q Consensus       317 ~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~-------------~~~~~~~~~-~~~~~~~gg~~~~~  382 (435)
                      .    .|.-..|++    .+|+++.++||.+.||.| |+|+++             ++++.+..- ...|.         
T Consensus       212 a----~g~~~~P~~----~ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~---------  273 (399)
T PF00464_consen  212 A----GGLFPNPFP----YADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPG---------  273 (399)
T ss_dssp             H----TTSS--GCC----TSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTT---------
T ss_pred             e----hheecCccc----cceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHHHHHHhccccCCC---------
Confidence            4    232223443    389999999999889886 888888             233333211 11222         


Q ss_pred             ccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        383 SVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       383 ~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                       +.|+.-...+++...+++......+.+..+++.++++.+.+.|.
T Consensus       274 -~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~  317 (399)
T PF00464_consen  274 -LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ  317 (399)
T ss_dssp             -T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence             33334444555665666666556667777777777776666554

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.60  E-value=8.4e-14  Score=141.32  Aligned_cols=250  Identities=15%  Similarity=0.015  Sum_probs=159.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.......     ....+.+.++.+.++++++... +.++++++|+||+..|++.++....     
T Consensus        60 ~~p~v~~a~~~q~~~~~~~~~~-----~~~~~~~~~la~~L~~~~~~~~-~~v~f~~SGseA~e~AlklAr~~tg-----  128 (433)
T PRK08117         60 RHPKVVQAIKEQADKLMHGPSG-----VIYYESILKLAEELAEITPGGL-DCFFFSNSGAEAIEGALKLAKHVTK-----  128 (433)
T ss_pred             CCHHHHHHHHHHHHhccCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCcHHHHHHHHHHHHHHhcC-----
Confidence            5899999999998764322111     0123556777788888874222 4799999999999999998876532     


Q ss_pred             CCCeEEEeCCCchhHHHHHH-HcC-------------CEEEEEecCCCcc------------ccHHHHHHHhh-----cC
Q psy10210        224 SLPEIVLPTTAHPAFDKAAN-YFG-------------MKVKHIRLTSSYT------------VDLAALQSAIT-----GN  272 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~-~~g-------------~~v~~vp~~~~~~------------~d~~~l~~~i~-----~~  272 (435)
                       +++|+..+..|++....+. ..+             ..+..+|....+.            -|++++++.+.     ++
T Consensus       129 -r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  207 (433)
T PRK08117        129 -RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE  207 (433)
T ss_pred             -CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence             3568888887777443322 111             0123444321111            15666777664     35


Q ss_pred             ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~  346 (435)
                      +.+|+++......|.+.+    +++|.++|++||+++|+||+|+||..     .|.   .+.....|  .|++  ++.|.
T Consensus       208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr-----~G~---~~~~~~~gv~pDi~--t~sK~  277 (433)
T PRK08117        208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGR-----TGE---WFAAQTFGVVPDIM--TIAKG  277 (433)
T ss_pred             EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCc-----ccc---chhHhhcCCCCCEe--ehhhh
Confidence            778888888777788855    99999999999999999999998633     122   22212223  3665  44587


Q ss_pred             CCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        347 GFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       347 ~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+...+|+++.++ ++.+..   .....+++     ..+  +....+++.++++.+..+++.+++++..+.+++.++.+
T Consensus       278 lg~G~pigav~~~~-~i~~~~---~~~~~~~T-----~~~--np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l  346 (433)
T PRK08117        278 IASGLPLSAVVASK-ELMEQW---PLGSHGTT-----FGG--NPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVL  346 (433)
T ss_pred             ccCCCcceeEEEcH-HHHhhc---cCCCCCCC-----CCc--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            55445678866654 443321   11112222     222  33345678888888877888888888888888777665

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.60  E-value=5.6e-13  Score=141.88  Aligned_cols=320  Identities=15%  Similarity=0.139  Sum_probs=200.5

Q ss_pred             hhhchhhHHHHHHHHHHHH----HHHH-hhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC
Q psy10210         69 ARKIPAVRKKLEEETGKVA----KLFQ-DDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY  143 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (435)
                      .|++-...+.+++||+.+.    +++. +.++.... ..-..++|+. .++.++++.+++...++.. + ..+.+.+.|.
T Consensus        15 ~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir-~~~~l~lp~~-~sE~e~~~~~~~~a~kN~~-~-~~fiG~G~y~   90 (954)
T PRK12566         15 RRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIR-LNRPLDLPAA-LDEQAALARLRGYAEQNQV-W-TSLIGMGYHG   90 (954)
T ss_pred             hccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHh-cCCCCCCCCC-CCHHHHHHHHHHHHhcCCC-c-cccccccccC
Confidence            4677667778888888654    4444 23333221 1112466764 8999999999998877643 2 2344444443


Q ss_pred             C-hHhHH-HHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        144 Y-QQDLV-DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       144 g-~~~l~-~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                      . .|.+. +.+.+.-+-+....|++++.+++..+...+...++++++|.+-. +-.+-.++|.+-..++.+.+....   
T Consensus        91 ~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~va-NASl~D~atA~aEA~~ma~~~~~~---  166 (954)
T PRK12566         91 TVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLA-NASLLDEATAAAEAMALAKRVAKS---  166 (954)
T ss_pred             CcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhh-hhhhccchhHHHHHHHHHHHHhhc---
Confidence            2 45544 55554322222236999999999999999999999999999754 556777877666644444432111   


Q ss_pred             CCCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        222 GISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       222 g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                        ++.+|++++..|+.+....+.    .|++++.           +++++.+++++.+|++.+|++ .|.++|+++|.++
T Consensus       167 --k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~  232 (954)
T PRK12566        167 --KSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQ  232 (954)
T ss_pred             --CCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHH
Confidence              135699999999997765544    4666654           334445566899999999987 8999999999999


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCCccccccccccCC
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDLKYKHCQYFVTSD  373 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~~~~~~~~~~~~~  373 (435)
                      +++.|..+++-.-.-.+        +.-.+|   ...|+|+++.+.+-+|    +|++..|++.++++ +.+.    .|.
T Consensus       233 ~h~~gal~~~~~d~laL--------~ll~~P---ge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~-~~R~----~PG  296 (954)
T PRK12566        233 LHGQQALACVAADLLSL--------LVLTPP---GELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD-YKRA----MPG  296 (954)
T ss_pred             HHHcCCEEEEEeCHHHH--------hCCCCh---hhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH-HHhh----CCC
Confidence            99999987643322111        111122   3558999988766553    34455788777764 3322    232


Q ss_pred             CCCCCCCCCccccCCCc-----------------------hHHHHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        374 WPGGNYGSPSVSGSRSG-----------------------GIIATCWA--AMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       374 ~~gg~~~~~~~~gsr~~-----------------------~~ia~~~a--~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ..-|.  +....|.|..                       .++.+..+  .+.++|.+|+++..+++...+..+.+.|.+
T Consensus       297 RivG~--s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~  374 (954)
T PRK12566        297 RIIGV--SRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA  374 (954)
T ss_pred             Cccce--eecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22221  1111121111                       11212222  245679999999988888777666665554

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.60  E-value=1.7e-14  Score=143.06  Aligned_cols=160  Identities=18%  Similarity=0.157  Sum_probs=118.6

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHc
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYF  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~  245 (435)
                      .|.+.++|+    .++++.|..   ..+.+++|+.|+.+++.++.+++|.        |+++...|..    +...+...
T Consensus        63 ~P~~~~lE~----~la~leg~~---~av~~sSG~aAi~~al~all~~GD~--------Vl~~~~~yg~t~~~~~~~~~~~  127 (384)
T PRK06434         63 NPTVQAFEE----KYAVLENAE---HALSFSSGMGAITSAILSLIKKGKR--------ILSISDLYGQTFYFFNKVLKTL  127 (384)
T ss_pred             ChhHHHHHH----HHHHHhCCC---cEEEeCCHHHHHHHHHHHHhCCCCE--------EEEecCccchHHHHHHHHHHhc
Confidence            355566555    466777664   4688888899999999998877776        9998775444    44667778


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      |++++.+++++...++       ++ +++++|++..++||++.+.|+++|.++|++++  +++|++++...         
T Consensus       128 Gi~v~fvd~~~~~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~---------  189 (384)
T PRK06434        128 GIHVDYIDTDRLNSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY---------  189 (384)
T ss_pred             CcEEEEECCCChhhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc---------
Confidence            9999999876322222       22 36899999999999999999999999999998  57799975321         


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      ...|++   .|+|+++.|.||++.|+.+  .|+++.+++++.+
T Consensus       190 ~~~pl~---~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~  229 (384)
T PRK06434        190 NQNPLD---LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFN  229 (384)
T ss_pred             cCCchh---cCCCEEEeecccccCCCCCceEEEEecCcHHHHH
Confidence            112343   4799999999999777654  4666666666543

>PRK07480 putative aminotransferase; Validated

Probab=99.59  E-value=9.1e-14  Score=141.33  Aligned_cols=260  Identities=18%  Similarity=0.115  Sum_probs=164.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+....+.    .+....+...++.+.+++++..+- +.++++++|+||++.|++.++..... +|.
T Consensus        67 ~~p~v~~Ai~~q~~~~~~~~~----~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AlklAr~~~~~-~g~  140 (456)
T PRK07480         67 GRKELADAAARQMRELPYYNT----FFKTTHPPAIELAAKLAEVAPPGF-NHVFFTNSGSEANDTVLRMVRHYWAL-KGK  140 (456)
T ss_pred             CCHHHHHHHHHHHHhcCCccc----ccccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHh-cCC
Confidence            489999999999886422211    112234666777888888875332 38999999999999999999876433 342


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc----ccc--------HHHHHHHhh----cCc
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY----TVD--------LAALQSAIT----GNT  273 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~----~~d--------~~~l~~~i~----~~~  273 (435)
                       .+++|+....+|++....+... |.            .+..+|....+    ..+        ++.+++.+.    +++
T Consensus       141 ~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v  220 (456)
T PRK07480        141 PQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNV  220 (456)
T ss_pred             CCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcE
Confidence             2567888888888754322221 11            11222211100    001        356665553    467


Q ss_pred             eEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCC
Q psy10210        274 VMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYG  347 (435)
Q Consensus       274 ~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~  347 (435)
                      .+|++...+...|.+    +.+++|.++|++||+++|+||++.||-.     .|   ..+.+...|+  |+++++  |.+
T Consensus       221 AAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~a~~~~gv~PDiv~~g--K~l  290 (456)
T PRK07480        221 AAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGR-----TG---EWFGSQHFGIKPDLMTIA--KGL  290 (456)
T ss_pred             EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cc---chhhhhhcCCCCCeeeee--hhh
Confidence            888888877766776    4499999999999999999999988732     12   2333333444  787775  864


Q ss_pred             Ccc-CCcEEEEEeCCccccccc-cccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHH-HHHHHHHHHHHH
Q psy10210        348 FTP-KGSSVVLYRDLKYKHCQY-FVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC-VRYHFNYKSCLQ  424 (435)
Q Consensus       348 ~~p-~g~g~il~~~~~~~~~~~-~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~-~~~~~~~~~~~~  424 (435)
                      .+. .++|.++.++ ++.+... .......+++|+..       ....+++.++|+.+.++++.+++ ++..+.+.+.++
T Consensus       291 ~gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~T~~gn-------pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~  362 (456)
T PRK07480        291 TSGYIPMGAVGVGD-RVAEVLIEEGGEFNHGFTYSGH-------PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLR  362 (456)
T ss_pred             ccCCccceEEEEcH-HHHHHHhcCCCCcccCCCCCcC-------HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            443 2567767654 4432210 00111233333322       33447888999999888999999 588888888877


Q ss_pred             hcC
Q psy10210        425 NLS  427 (435)
Q Consensus       425 ~l~  427 (435)
                      ++.
T Consensus       363 ~l~  365 (456)
T PRK07480        363 ELA  365 (456)
T ss_pred             Hhh
Confidence            654

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.59  E-value=6.5e-14  Score=141.51  Aligned_cols=267  Identities=17%  Similarity=0.073  Sum_probs=166.6

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...+++..   +++|++.+++.+.+.+.......     ....+.+.++.+.+++++.....+.++++++|+|
T Consensus        31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~-----~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGse  105 (420)
T TIGR00700        31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM-----VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAE  105 (420)
T ss_pred             CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc-----ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHH
Confidence            445555444333232   34899999999998864322111     0122345567777888774322247999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C--------C-----EEEEEecCCCcc-----------
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G--------M-----KVKHIRLTSSYT-----------  259 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g--------~-----~v~~vp~~~~~~-----------  259 (435)
                      |+..|++.++....      +++|+....+|++....+... +        .     .+..+|......           
T Consensus       106 A~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (420)
T TIGR00700       106 AVENAVKIARSYTG------RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTD  179 (420)
T ss_pred             HHHHHHHHHHHhcC------CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHH
Confidence            99999999886532      356888888888854333321 1        0     123343321110           


Q ss_pred             ccHHHHHHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        260 VDLAALQSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       260 ~d~~~l~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                      -+++.+++.+.     +++.+|+++.....+|.+    +.+++|.++|++||+++|+||+|.+|...     |   ..+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~-----g---~~~a  251 (420)
T TIGR00700       180 GELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART-----G---AMFA  251 (420)
T ss_pred             HHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc-----c---hhHH
Confidence            12556776652     467889988887777876    34999999999999999999999987431     2   1122


Q ss_pred             CCCC--CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        331 FSLP--GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       331 ~~~~--gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      +...  ..|++++  .|.+.+...+|+++.+ +++.+..   .....+++     ..++  ....+++.++++.+..+++
T Consensus       252 ~~~~~~~pDi~~l--sK~l~~G~pig~v~~~-~~i~~~~---~~~~~~~T-----~~~~--pl~~aaa~a~l~~l~~~~~  318 (420)
T TIGR00700       252 CEHEGPEPDLITT--AKSLADGLPLSGVTGR-AEIMDAP---APGGLGGT-----YAGN--PLACAAALAVLAIIESEGL  318 (420)
T ss_pred             HhhcCCCCCEEEe--eccccCCcceEEEEec-HHHHhhc---CCCCcCCC-----CCcC--HHHHHHHHHHHHHHHhccH
Confidence            2222  2476664  5875555678996665 4444331   11122222     2222  2233567778888888889


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy10210        409 VWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l  426 (435)
                      .+++++..+.+++.++.+
T Consensus       319 ~~~~~~~g~~l~~~L~~l  336 (420)
T TIGR00700       319 IERARQIGRLVTDRLTTL  336 (420)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999888888777665

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>KOG1402|consensus

Probab=99.59  E-value=8.9e-14  Score=128.60  Aligned_cols=251  Identities=17%  Similarity=0.143  Sum_probs=177.0

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|.+.+++.+...+..-+.      -........+..+.+.++||.+   .++-++.|.||...+++.+|.++...|+++
T Consensus        77 hpki~~aLqeq~~kLtlss------rafYnd~~~~f~~~vt~lf~~~---kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip  147 (427)
T KOG1402|consen   77 HPKIIKALQEQADKLTLSS------RAFYNDVLGEFAEYVTKLFGYD---KVLPMNTGAEAVETACKLARKWGYRKKNIP  147 (427)
T ss_pred             CHHHHHHHHHHHhHhhhhh------HHHhhhhHHHHHHHHHHhcCcc---eeeecccchhHHHHHHHHHHHHHHhhccCC
Confidence            8899999988877532211      1123455667778899999885   578888889999999999999999989987


Q ss_pred             CC--eEEEeCCCchhHHHHHHHcCCE--------------EEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCccc
Q psy10210        225 LP--EIVLPTTAHPAFDKAANYFGMK--------------VKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGT  287 (435)
Q Consensus       225 ~~--~viv~~~~~~~~~~~~~~~g~~--------------v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~  287 (435)
                      +.  .|+....+|++-...+-.++.+              +..||.     -|.++++.++++ +.+++++...+...|+
T Consensus       148 ~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~d~eale~~l~~~~vaaFivEPIQGEaGV  222 (427)
T KOG1402|consen  148 KNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----GDAEALEVALKSPNVAAFIVEPIQGEAGV  222 (427)
T ss_pred             ccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----CCHHHHHHHhcCCCeeEEEeeccccccce
Confidence            43  3444455555422111111111              222332     278999999875 6788888888888998


Q ss_pred             c----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCCc
Q psy10210        288 M----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLK  362 (435)
Q Consensus       288 ~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~  362 (435)
                      +    ..++++.++|++|++++|.||++.|....     |.- --.|...-..|++.+.  |.+. |-.+.+.++..+ +
T Consensus       223 vvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT-----Gk~-la~d~env~PDivilg--KalSGG~~Pvsavl~~~-~  293 (427)
T KOG1402|consen  223 VVPPPGYLKKVRELCTKYNVLLIADEVQTGLART-----GKL-LACDYENVRPDIVILG--KALSGGVYPVSAVLADD-D  293 (427)
T ss_pred             EeCCchhHHHHHHHHHhhcEEEEehhhhhccccc-----CcE-EEeehhhcCCCeEEEe--ccccCCeeeeEEEEecH-H
Confidence            8    56999999999999999999999987542     210 0123333334877776  6543 346778866555 4


Q ss_pred             cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        363 YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       363 ~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +...   +.|.-.|.+|+..++.+       +.+.|++..+.++.+.++++++...++..+.+|+.
T Consensus       294 im~~---~~pgeHgsTyggNpLg~-------~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~  349 (427)
T KOG1402|consen  294 IMLN---IKPGEHGSTYGGNPLGC-------AVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQK  349 (427)
T ss_pred             HHhc---cCCCccccccCCChHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            4322   35655777777666655       67889999999999999999999999999888765

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.59  E-value=6.3e-14  Score=137.43  Aligned_cols=258  Identities=16%  Similarity=0.068  Sum_probs=165.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+......+.+.     .....+...++.+.+.+.++. ..+.+.++++|+||++.|++.++.........
T Consensus        33 ~~p~i~~ai~~~~~~~~~~~~-----~~~~~~~~~~la~~L~~~~p~-~~~~v~f~~sGseAve~Alkla~~~~~~~~~~  106 (339)
T PF00202_consen   33 NHPEIAEAIAEQANKLNYVSF-----SGFTHPEAAELAEKLAELFPG-GLDRVFFANSGSEAVEAALKLARQYHNKRAYT  106 (339)
T ss_dssp             T-HHHHHHHHHHHHHCSSCST-----TTSEEHHHHHHHHHHHHHSST-TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CccccchhHHHHhhhcccccc-----cceeccchhhhhhhhhhcccc-ccceeeeccCchHHHHHHHHHhhccccccccc
Confidence            489999999998877433221     122345566777788888844 23589999999999999999998332221111


Q ss_pred             CCCeEEEeCCCchhHHHHHHH-cC------------CEEEEEecCCCcc-----ccHHHHHH----HhhcCceEEEEeCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY-FG------------MKVKHIRLTSSYT-----VDLAALQS----AITGNTVMLVGSMP  281 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~-~g------------~~v~~vp~~~~~~-----~d~~~l~~----~i~~~~~~v~~~~p  281 (435)
                      .++.|+....+|++....+.. .+            ..+..+|.+....     -..+++++    ...+++.+|+++..
T Consensus       107 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi  186 (339)
T PF00202_consen  107 GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPI  186 (339)
T ss_dssp             TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESS
T ss_pred             CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEecc
Confidence            356799998888873332222 11            1456777653111     01122222    22456789999988


Q ss_pred             CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEE
Q psy10210        282 NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSV  355 (435)
Q Consensus       282 ~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~  355 (435)
                      ....|.+    +.+++|.++|++||+++|+||++.||-.        ....+.+...|  .|+++++  |.+.+...+|.
T Consensus       187 ~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR--------tG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sa  256 (339)
T PF00202_consen  187 QGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGR--------TGKFFASEHYGVDPDIVTFG--KGLGGGLPISA  256 (339)
T ss_dssp             BTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTT--------TSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEE
T ss_pred             ccccCccccccchhhehcccccccccceecccccccccc--------cCCccceecccccCcccccc--cchhhhhhccc
Confidence            7767766    5689999999999999999999998833        22234333333  3999987  77555588899


Q ss_pred             EEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        356 VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       356 il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ++++++ +.+..   .+.-.+++++..       ....+++.++++.+.++++.+++++..+.+++.++.|..
T Consensus       257 v~~~~~-i~~~~---~~~~~~~T~~g~-------p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~  318 (339)
T PF00202_consen  257 VLGSEE-IMEAF---QPGSHGSTFGGN-------PLSCAAALATLEILEEEDLLERVRELGERLREGLRELAA  318 (339)
T ss_dssp             EEEEHH-HHTTS---CTTSSTCTTTT--------HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccch-hhccc---cccccccccccc-------hHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            787764 33221   111133332222       233468889999999999999999999988888876653

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.59  E-value=1.2e-13  Score=140.63  Aligned_cols=268  Identities=14%  Similarity=0.134  Sum_probs=169.6

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC--CCceEEc-C
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP--ETCGCMT-S  200 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~--~~~~~~t-~  200 (435)
                      .++..|.+...+++..   +++|++.+++.+++.+.......     ....+.+.++.+.+++++...-  ...++++ +
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~  134 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL-----DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGP  134 (464)
T ss_pred             CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc-----ccCCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence            3445555543333222   24899999999988642211111     1123445556666777663221  1246564 7


Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCcc--------
Q psy10210        201 GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYT--------  259 (435)
Q Consensus       201 ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~--------  259 (435)
                      +|+||+..|++.++....      +++|+....+|++....+... |            -.+..+|.+.+.+        
T Consensus       135 SGSEAve~AlklAr~~tg------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  208 (464)
T PRK06938        135 TGTDAVEAALKLVKTATG------RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGE  208 (464)
T ss_pred             CcHHHHHHHHHHHHHhhC------CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence            999999999999886522      456888888888855443321 1            0234454432111        


Q ss_pred             ----ccHHHHHHHhhc------CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        260 ----VDLAALQSAITG------NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       260 ----~d~~~l~~~i~~------~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                          .+++.+++.+.+      ++.+|++.......|.+    +.++++.++|++||+++|.||++.||-.     .|  
T Consensus       209 ~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGR-----tG--  281 (464)
T PRK06938        209 AGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGR-----TG--  281 (464)
T ss_pred             hHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Cc--
Confidence                236778888753      47888888776656765    5699999999999999999999998832     12  


Q ss_pred             CCCCCCCCCCc--cEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        326 LPPFDFSLPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       326 ~~~~d~~~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                       ..+.+...|+  |+++++  |.+.+..++|+++.+++ + +.   +.+...+++|+..       ..+.+++.++++.+
T Consensus       282 -~~~a~e~~gv~PDiv~~g--KglggG~PlsAv~~~~~-~-~~---~~~~~~~~T~~gn-------pla~Aaa~a~L~~l  346 (464)
T PRK06938        282 -KMFAFEHAGIIPDVVVLS--KAIGGSLPLAVVVYREW-L-DT---WQPGAHAGTFRGN-------QMAMAAGSATLRYI  346 (464)
T ss_pred             -HHHHHHhcCCCCCEEEee--ccccCCCceEEEeehhH-h-hc---cCCCCCCCCCCcC-------HHHHHHHHHHHHHH
Confidence             2233333343  888886  76555577888787654 3 21   1222233333322       23347888999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .++++.++++++.+++.+.++++.
T Consensus       347 ~~~~l~~~~~~~G~~l~~~L~~l~  370 (464)
T PRK06938        347 KEHRLAEHAAAMGERLREHLRQLQ  370 (464)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999888887653

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.59  E-value=7.4e-14  Score=140.70  Aligned_cols=276  Identities=14%  Similarity=-0.009  Sum_probs=169.1

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+.+..   +++|++.+++.+++.+..+....     ....+...++.+.++++++.+- +.++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs  110 (422)
T PRK05630         37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG-----GLTHEPAIKLTRKLLNLTDNGL-DHVFYSDSGS  110 (422)
T ss_pred             CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC-----CcCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence            3445555443333222   34899999999999874332111     0123455677778888774322 4899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcccc-------
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYTVD-------  261 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~~d-------  261 (435)
                      ||++.|++.++..... +|. .+++|+....+|++....+... +-             ....+|.......+       
T Consensus       111 eA~e~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  189 (422)
T PRK05630        111 VSVEVAIKMALQYSKG-QGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY  189 (422)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHH
Confidence            9999999999876543 343 3567888888888844333221 11             12334332111111       


Q ss_pred             HHHHHHHhhcCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        262 LAALQSAITGNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       262 ~~~l~~~i~~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      .+.+++.+.+++.+|+++.. +...|.+    +.+++|.++|++||+++|+||++.|+-.     .|   ..+.+...|+
T Consensus       190 ~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~Gr-----tG---~~~a~~~~gv  261 (422)
T PRK05630        190 LRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGR-----TG---ELFATLAAGV  261 (422)
T ss_pred             HHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCc-----Cc---hhhHHHhcCC
Confidence            34556666667888888874 6656665    6799999999999999999999987732     12   2233333343


Q ss_pred             --cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210        337 --TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW  410 (435)
Q Consensus       337 --d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~  410 (435)
                        |+++++  |.+.+. ...|+++.++ ++.+......   ..+.+++|+     |  +....+++.++++.+.+++..+
T Consensus       262 ~PDi~t~g--K~l~gG~~p~~av~~~~-~i~~~~~~~~~~~~~~h~~T~~-----g--~Pla~aaa~aaL~~l~~~~~~~  331 (422)
T PRK05630        262 TPDIMCVG--KALTGGFMSFAATLCTD-KVAQLISTPNGGGALMHGPTFM-----A--NPLACAVAHASLEIIETGMWRK  331 (422)
T ss_pred             CCCeeeee--chhhcCccccceeeccH-HHHHHHhccCCCCccccCCCCc-----C--CHHHHHHHHHHHHHHHhCcHHH
Confidence              788665  875443 3457756654 3332210000   001233332     2  2234467888899998888888


Q ss_pred             HHHHHHHHHHHHHHhcC
Q psy10210        411 ICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       411 ~~~~~~~~~~~~~~~l~  427 (435)
                      +++++.+++++.++.+.
T Consensus       332 ~~~~~g~~l~~~L~~l~  348 (422)
T PRK05630        332 QVKRIEAELIAGLSPLA  348 (422)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99998888887776553

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.59  E-value=9e-14  Score=140.15  Aligned_cols=276  Identities=14%  Similarity=0.029  Sum_probs=170.8

Q ss_pred             CCCCCCCCCccccc---ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGA---VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~---~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+.+   .-+++|++.+++.+++.+..+....     ....+...++.+.++++++.+- +.++++++|+
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~-~~v~f~~SGs  113 (428)
T PRK07986         40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG-----GITHPPAIELCRKLVAMTPQPL-ECVFLADSGS  113 (428)
T ss_pred             CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc-----ccCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence            34455554433322   2235899999999998864322110     1123456677778888775322 4899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCC-c-----cccHH
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSS-Y-----TVDLA  263 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~-~-----~~d~~  263 (435)
                      ||++.|++.++..... +|..+++|+....+|++....+... +-             .+..+|.... .     .-|++
T Consensus       114 EAve~AlklAr~~~~~-~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~  192 (428)
T PRK07986        114 VAVEVAMKMALQYWQA-KGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIA  192 (428)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHH
Confidence            9999999999876433 3444677999888888744332221 11             1223332211 0     12567


Q ss_pred             HHHHHhh---cCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        264 ALQSAIT---GNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       264 ~l~~~i~---~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      ++++.+.   +++.+|++... +...|.+    +.+++|.++|++||+++|+||++.||-.     .|   ..+.+...|
T Consensus       193 ~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~Gr-----tG---~~fa~~~~g  264 (428)
T PRK07986        193 PFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGR-----TG---KLFACEHAG  264 (428)
T ss_pred             HHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCcc-----CC---CeeeecccC
Confidence            7888775   35677777764 5545553    5599999999999999999999987622     22   233333334


Q ss_pred             c--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccccC-C-CCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210        336 V--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTS-D-WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW  410 (435)
Q Consensus       336 v--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~-~-~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~  410 (435)
                      +  |++++  .|.+.+. ..+|+++.++ ++.+....... . ..+++|     .|  +....+++.++++.+.++++.+
T Consensus       265 v~PDi~t~--gK~l~gG~~p~~av~~~~-~i~~~~~~~~~~~~~~~~T~-----~g--~p~~~aaa~a~L~~i~~~~~~~  334 (428)
T PRK07986        265 IAPDILCL--GKALTGGTMTLSATLTTR-EVAETISNGEAGCFMHGPTF-----MG--NPLACAVANASLSLLESGDWQQ  334 (428)
T ss_pred             CCCCEEEe--chhhhCCcccCcchhchH-HHHHHhhcCCCCccccCCCC-----Cc--CHHHHHHHHHHHHHHHhCCHHH
Confidence            3  77765  4765444 3567756554 44332110000 0 122222     22  2344578889999998888999


Q ss_pred             HHHHHHHHHHHHHHhcC
Q psy10210        411 ICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       411 ~~~~~~~~~~~~~~~l~  427 (435)
                      +++++.+++++.++++.
T Consensus       335 ~~~~~g~~l~~~l~~l~  351 (428)
T PRK07986        335 QVAAIEAQLREELAPLR  351 (428)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999888887763

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.59  E-value=1.9e-13  Score=138.78  Aligned_cols=251  Identities=16%  Similarity=0.030  Sum_probs=160.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.....+.     ....+.+.++.+.+++++.....+.++++++|+||++.|++.++....     
T Consensus        59 ~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tg-----  128 (445)
T PRK08593         59 APPRVVEAIKAQADKFIHYTPA-----YMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTG-----  128 (445)
T ss_pred             CCHHHHHHHHHHHHhccCcccc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhC-----
Confidence            4899999999998864322111     112456677788888887543224799999999999999999876532     


Q ss_pred             CCCeEEEeCCCchhHHHHHH-HcCC-------------EEEEEecCCCcc-----cc-------HHHHHHHhh-----cC
Q psy10210        224 SLPEIVLPTTAHPAFDKAAN-YFGM-------------KVKHIRLTSSYT-----VD-------LAALQSAIT-----GN  272 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~-~~g~-------------~v~~vp~~~~~~-----~d-------~~~l~~~i~-----~~  272 (435)
                       +++|+..+.+|++....+. ..+.             .+..+|..+...     .+       ++++++.+.     ++
T Consensus       129 -r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (445)
T PRK08593        129 -RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADE  207 (445)
T ss_pred             -CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCc
Confidence             3468888888887543332 2221             234454321111     11       244555442     46


Q ss_pred             ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~  346 (435)
                      +++|+++......|.+.+    +++|.++|++||+++|+||++.||-.     .|.   .+.....|  .|+++++  |.
T Consensus       208 iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Gr-----tG~---~~a~~~~gv~pDi~t~g--K~  277 (445)
T PRK08593        208 VACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGR-----TGK---WSSISHFNITPDLMSFG--KS  277 (445)
T ss_pred             eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cch---HHHHHhcCCCCCEeeec--cc
Confidence            889999988887787743    99999999999999999999987632     121   12222223  3777655  76


Q ss_pred             CCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        347 GFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       347 ~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+..++|+++.+ +++.+..   .....+     .+..+  +....+++.++++.+.++++.+++++..+++++.++++
T Consensus       278 l~~G~p~gav~~~-~~i~~~~---~~~~~~-----~T~~~--~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l  346 (445)
T PRK08593        278 LAGGMPMSAIVGR-KEIMESL---EAPAHL-----FTTGA--NPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQW  346 (445)
T ss_pred             ccCCcccEEEEEc-HHHHhhh---ccCCCC-----CCCCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            5444557886665 4443321   111111     12222  22345678889999988889999999988888887765

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.59  E-value=2.1e-13  Score=138.31  Aligned_cols=263  Identities=15%  Similarity=0.111  Sum_probs=165.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+..+....     ....+...++.+.+++++.... +.++++++|+||+..|++.++..... +|.
T Consensus        66 ~~p~v~~ai~~ql~~l~~~~~~-----~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~-~g~  138 (445)
T PRK09221         66 GRPEIVEAVARQAATLDYAPAF-----QMGHPLAFELAERLAELAPGGL-DHVFFTNSGSESVDTALKIALAYHRA-RGQ  138 (445)
T ss_pred             CCHHHHHHHHHHHHhccCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHh-cCC
Confidence            5899999999998864332211     1123455667788888874322 47999999999999999999876543 332


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCC-C----cc--------ccHHHHHHHhh----cC
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTS-S----YT--------VDLAALQSAIT----GN  272 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~-~----~~--------~d~~~l~~~i~----~~  272 (435)
                       .+.+|+....+|++....+... |            ..+..+|... .    +.        ...+++++.+.    ++
T Consensus       139 ~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~  218 (445)
T PRK09221        139 GTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDAST  218 (445)
T ss_pred             CCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCc
Confidence             3567888888888754332221 1            1123343221 0    00        01356777664    46


Q ss_pred             ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~  346 (435)
                      +.+|+++......|.+.+    +++|.++|++||+++|+||+++||-.        ....+.+...|+  |+++++  |.
T Consensus       219 iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GR--------tG~~~~~~~~gv~PDi~~~g--K~  288 (445)
T PRK09221        219 IAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGR--------LGAAFAAERFGVTPDIITFA--KG  288 (445)
T ss_pred             EEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCc--------CchhhHHHhcCCCCCEEEec--cc
Confidence            788999988887888855    99999999999999999999987632        112333333344  877776  65


Q ss_pred             CCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        347 GFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      +.+. ..+|.++.++ ++.+.... .+........+.+..+  +...++++.++++.+.++++.++++++.+++++.+++
T Consensus       289 l~gG~~Pi~av~~~~-~i~~~~~~-~~~~~~~~~~~~T~~~--~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~  364 (445)
T PRK09221        289 LTNGAIPMGAVIASD-EIYDAFMQ-GPEYAIEFFHGYTYSA--HPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHS  364 (445)
T ss_pred             cccCcccceeeEEcH-HHHHhhcc-CcccccccccccCCCc--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence            3332 3467766654 44332110 1110000001122222  3333467778999998889999999999999988887


Q ss_pred             cC
Q psy10210        426 LS  427 (435)
Q Consensus       426 l~  427 (435)
                      +.
T Consensus       365 l~  366 (445)
T PRK09221        365 LK  366 (445)
T ss_pred             hc
Confidence            64

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.58  E-value=5e-13  Score=135.51  Aligned_cols=249  Identities=16%  Similarity=0.060  Sum_probs=160.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+..+....     ....+.+.++.+.+++++..+..+.++++++|+||+..|++.++....     
T Consensus        71 ~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tg-----  140 (441)
T PRK05769         71 AHPKVVKAVKEQAEKFLHYSLT-----DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTG-----  140 (441)
T ss_pred             CCHHHHHHHHHHHHhccCccCc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhC-----
Confidence            4899999999998864322110     112355677888888887532224899999999999999999986532     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcc-------------ccHHHHHH-Hhh-----
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYT-------------VDLAALQS-AIT-----  270 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~-------------~d~~~l~~-~i~-----  270 (435)
                       +++|+....+|++....+... +.             .+..+|......             .+++.+++ .++     
T Consensus       141 -r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~  219 (441)
T PRK05769        141 -RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP  219 (441)
T ss_pred             -CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCC
Confidence             456888888888855433221 21             233444321111             12344565 222     


Q ss_pred             cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCC
Q psy10210        271 GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTH  344 (435)
Q Consensus       271 ~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~h  344 (435)
                      +++.+|++.......|.+-+    +++|.++|++||+++|+||+++||..     .|.   .+.+...|  .|+++++  
T Consensus       220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr-----~G~---~~a~~~~gv~pDivt~~--  289 (441)
T PRK05769        220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGR-----TGK---MFAIEHFGVEPDIITLA--  289 (441)
T ss_pred             CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----ccc---eehhhccCCCCCEEEEc--
Confidence            35778888877777788755    99999999999999999999987633     121   22222223  3888765  


Q ss_pred             CCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        345 KYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       345 K~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                      |.+.++.+.|+++.++ ++...    .....+++     ..|  +....+++.++++.+.+ ++.+++++..+++++.++
T Consensus       290 K~l~~G~p~gav~~~~-~i~~~----~~~~~~~T-----~~g--~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~  356 (441)
T PRK05769        290 KAIAGGLPLGAVIGRA-ELMFL----PPGSHANT-----FGG--NPVAAAAALATLEELEE-GLLENAQKLGEYLRKELK  356 (441)
T ss_pred             ccccCCcccEEEEEeh-hhhhc----CCCCCCCC-----CCc--CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            7654546678866654 43321    11222332     223  23345678889999987 889999998888887776


Q ss_pred             hc
Q psy10210        425 NL  426 (435)
Q Consensus       425 ~l  426 (435)
                      ++
T Consensus       357 ~l  358 (441)
T PRK05769        357 EL  358 (441)
T ss_pred             HH
Confidence            54

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.58  E-value=2.9e-13  Score=136.88  Aligned_cols=266  Identities=15%  Similarity=0.079  Sum_probs=162.4

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC--CCceEE-cCC
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP--ETCGCM-TSG  201 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~--~~~~~~-t~g  201 (435)
                      ++..|.+...++++.   +++|++.+++.+++.+.......     ....+...++.+.+++++..+.  +..+.+ +++
T Consensus        37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-----~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  111 (425)
T PRK09264         37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL-----DMHTTAKREFLETFEETILKPRGLDYKVQFTGPT  111 (425)
T ss_pred             CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc-----ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence            444555443333222   24899999999988763222221     1123455667777777653221  124556 589


Q ss_pred             hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C---------C---EEEEEecCCCc---cccHHHH
Q psy10210        202 GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G---------M---KVKHIRLTSSY---TVDLAAL  265 (435)
Q Consensus       202 gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g---------~---~v~~vp~~~~~---~~d~~~l  265 (435)
                      |+||+..|++.++....      +++|+....+|++....+... +         .   .+..+|.+...   .-|++++
T Consensus       112 GseA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l  185 (425)
T PRK09264        112 GTNAVEAALKLARKVTG------RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYL  185 (425)
T ss_pred             HHHHHHHHHHHHHHhcC------CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHH
Confidence            99999999999986632      456888888888854433221 1         1   24455543111   1267788


Q ss_pred             HHHhhc------CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC-
Q psy10210        266 QSAITG------NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-  334 (435)
Q Consensus       266 ~~~i~~------~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-  334 (435)
                      ++.+.+      ++++|++.......|.+    +.+++|.++|++||+++|+||+++||..     .|   ..+.+... 
T Consensus       186 ~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr-----tG---~~~~~~~~~  257 (425)
T PRK09264        186 EKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGR-----TG---TFFSFERAG  257 (425)
T ss_pred             HHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcc-----cc---HHHHHhhcC
Confidence            888852      46788888877767764    5899999999999999999999987632     12   11111112 


Q ss_pred             -CccEEEecCCCCCCc-cCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHH-HHhcHHHHHHH
Q psy10210        335 -GVTSISVDTHKYGFT-PKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAM-MYFGFEAQVWI  411 (435)
Q Consensus       335 -gvd~~~~s~hK~~~~-p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l-~~~g~~g~~~~  411 (435)
                       ..|+++++  |.+.+ ...+|+++.+++ +. .   +.....+++|     .+.  ....+++.+++ ..+..+++.++
T Consensus       258 v~PDi~t~~--K~l~~~G~pigav~~~~~-i~-~---~~~~~~~~T~-----~gn--p~~~aaa~a~l~~~~~~~~l~~~  323 (425)
T PRK09264        258 ITPDIVTLS--KSISGYGLPMALVLIKPE-LD-V---WKPGEHNGTF-----RGN--NLAFVTATAALEEYWSDDAFEKE  323 (425)
T ss_pred             CCCCEEEec--cccCCCccceEEEEEchh-hh-c---cCCCccCCCC-----CCC--HHHHHHHHHHHHHHHhhhHHHHH
Confidence             24777775  86433 345688777644 32 1   1111222222     221  12335666777 55666689999


Q ss_pred             HHHHHHHHHHHHHhc
Q psy10210        412 CVRYHFNYKSCLQNL  426 (435)
Q Consensus       412 ~~~~~~~~~~~~~~l  426 (435)
                      ++++.+.+.+.++++
T Consensus       324 ~~~~g~~l~~~l~~l  338 (425)
T PRK09264        324 VKAKGELVRERLEEI  338 (425)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999988888777654

>PRK07036 hypothetical protein; Provisional

Probab=99.58  E-value=2.8e-13  Score=138.18  Aligned_cols=260  Identities=15%  Similarity=0.118  Sum_probs=165.3

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+..+..++.    ....+.+.++.+.+++++..+- +.++++++|+||+..|++.++..... +|.
T Consensus        68 ~~p~v~~Ai~~q~~~~~~~~~~~----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~-~g~  141 (466)
T PRK07036         68 GREEMADAIADQARRLPYYTPFG----DMTNAPAAELAAKLAELAPGDL-NHVFLTTGGSTAVDSALRFVHYYFNV-RGR  141 (466)
T ss_pred             CCHHHHHHHHHHHHhCccccccc----ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHHh-cCC
Confidence            48999999999988643222110    1234556777888888774322 47999999999999999999876433 342


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC----ccc--------cHHHHHHHhh----cCc
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS----YTV--------DLAALQSAIT----GNT  273 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~----~~~--------d~~~l~~~i~----~~~  273 (435)
                       .+++|+....+|++....+... |-            .+..+|....    ...        .++.+++.+.    +++
T Consensus       142 t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i  221 (466)
T PRK07036        142 PAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNI  221 (466)
T ss_pred             CCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCce
Confidence             3567888888888855333221 11            1333433211    011        1244555553    457


Q ss_pred             eEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCC--ccEEEecCCCC
Q psy10210        274 VMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG--VTSISVDTHKY  346 (435)
Q Consensus       274 ~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g--vd~~~~s~hK~  346 (435)
                      .+|+++......|.+    +.+++|.++|++||+++|+||++.||-.     .|   ..+.+. ..|  .|+++++  |.
T Consensus       222 Aavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~~~~~~~gv~PDivt~g--K~  291 (466)
T PRK07036        222 AAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGR-----LG---HFFASEAVFGIQPDIITFA--KG  291 (466)
T ss_pred             EEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc-----Cc---hhhhhhhhcCCCCCEEEEc--cc
Confidence            889988887777777    3499999999999999999999988732     12   122222 223  4888776  86


Q ss_pred             CCcc-CCcEEEEEeCCccccccccc---cCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        347 GFTP-KGSSVVLYRDLKYKHCQYFV---TSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~~~~~~~~~---~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                      +.+. .++|.++.++ ++.+.....   ...+ .+++|     .|  +....+++.++++.+.++++.++++++.+++++
T Consensus       292 l~gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~~~~T~-----~g--npl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~  363 (466)
T PRK07036        292 LTSGYQPLGAVIISE-RLLDVISGPNAKGNVFTHGFTY-----SG--HPVACAAALKNIEIMEREGLCEHVREVGPYFEE  363 (466)
T ss_pred             cccCccccEEEEEcH-HHHHHHhcccCcCcccccCCCC-----CC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            5444 3578877654 443321000   0001 22222     22  223347888899999888999999999999988


Q ss_pred             HHHhcC
Q psy10210        422 CLQNLS  427 (435)
Q Consensus       422 ~~~~l~  427 (435)
                      .++.+.
T Consensus       364 ~L~~l~  369 (466)
T PRK07036        364 RLASLR  369 (466)
T ss_pred             HHHHhc
Confidence            887664

>KOG0258|consensus

Probab=99.58  E-value=3.8e-14  Score=133.70  Aligned_cols=224  Identities=18%  Similarity=0.176  Sum_probs=162.6

Q ss_pred             hhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhc-CC--------CCccc---------cCCCCCCCCHHH
Q psy10210         55 DSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQN-NA--------GLEYF---------LELPSQGRNRLE  116 (435)
Q Consensus        55 ~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~-~~--------~~~~~---------~~~P~~~~~~~~  116 (435)
                      +++..++++.-+..--.++....++++++.+-....++++... .+        .+.|.         ..+=+.+..|.+
T Consensus        11 ~~~N~~V~k~eYAVRG~i~~rA~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~D   90 (475)
T KOG0258|consen   11 DSLNPNVKKAEYAVRGPIVIRADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTD   90 (475)
T ss_pred             hhcChhhhhhhhhhccchhhhHHHHHHHHHhcccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHH
Confidence            4555666666666666667767777777766321111111110 00        01110         111123346788


Q ss_pred             HHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCce
Q psy10210        117 ILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCG  196 (435)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~  196 (435)
                      ++++....+...+-    +.-.|....|.+-+|+.+++.++++.. .|.                         ++ ++|
T Consensus        91 ai~RA~~~L~~~gG----s~GaYS~SqGv~~vR~~VA~~I~rRDG-~p~-------------------------~p-~dI  139 (475)
T KOG0258|consen   91 AIKRAKRILNDCGG----SLGAYSDSQGVPGVRKHVAEFIERRDG-IPA-------------------------DP-EDI  139 (475)
T ss_pred             HHHHHHHHHHhcCC----cccccccccCChhHHHHHHHHHHhccC-CCC-------------------------CH-HHe
Confidence            88888888876421    223355666899999999999988755 333                         33 389


Q ss_pred             EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc---
Q psy10210        197 CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG---  271 (435)
Q Consensus       197 ~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~---  271 (435)
                      ++|+|++.|+...+..+...  .     ++-|++|-|.|+-|...+..+|...+..-+|  .+|.+|.+++++.+++   
T Consensus       140 ~LT~GAS~ai~~il~l~~~~--~-----~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k  212 (475)
T KOG0258|consen  140 FLTTGASPAIRSILSLLIAG--K-----KTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARK  212 (475)
T ss_pred             eecCCCcHHHHHHHHHHhcC--C-----CCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhc
Confidence            99999999999999988643  2     2339999999999999999999988777776  6899999999998875   


Q ss_pred             --CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210        272 --NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLA  316 (435)
Q Consensus       272 --~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~  316 (435)
                        +++++++.+|.||||.+   +.+++|.++|+++++.++.||+|-.-++
T Consensus       213 ~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy  262 (475)
T KOG0258|consen  213 GINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVY  262 (475)
T ss_pred             cCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhcc
Confidence              67899999999999999   8899999999999999999999987665

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.58  E-value=1.1e-13  Score=136.37  Aligned_cols=226  Identities=19%  Similarity=0.116  Sum_probs=153.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.....+.    +  ..+...++.+.++++++.   +.++++++||||+..|++.++....     
T Consensus        41 ~~p~v~~ai~~ql~~~~~~~~~----~--~~~~~~~la~~l~~~~~~---~~v~~~~SGseA~e~Alklar~~~g-----  106 (364)
T PRK04013         41 NHPEWVEEMSEQLEKLVVAGPM----F--EHEEKEEMLEELSKWVNY---EYVYMGNSGTEAVEAALKFARLYTG-----  106 (364)
T ss_pred             CCHHHHHHHHHHHHhcCCccCC----c--CCHHHHHHHHHHHhhcCC---CEEEEeCchHHHHHHHHHHHHHHhC-----
Confidence            4899999999998874322221    1  123445566677777754   3789999999999999999876532     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc--------CC-----EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc-c
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF--------GM-----KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-D  289 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~--------g~-----~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~  289 (435)
                       +++|+..+.+|++....+...        +.     .+..+|.     .|++++++.+.+++++|++.......|.. .
T Consensus       107 -r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~  180 (364)
T PRK04013        107 -RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAITKETAAVIFEPIQGEGGIVPA  180 (364)
T ss_pred             -CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhcCCcEEEEEcCCcCCCCCcCC
Confidence             356999988888855443331        11     1222222     26788999998899999999887766665 2


Q ss_pred             ---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        290 ---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       290 ---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                         .++++.++|++||+++|+||++.|+ ..     |.   .+.+...+  .|+++++  |.+.+...+|.++.+++ +.
T Consensus       181 ~~~yl~~lr~lc~~~gillI~DEv~tG~-Rt-----G~---~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~-~~  248 (364)
T PRK04013        181 KEEFVKTLRDLTEDVGALLIADEVQSGL-RT-----GK---FLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFD-VE  248 (364)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEechhhcC-CC-----Cc---hhHHHhcCCCCCEEEec--ccccCCceeEEEEeccc-cc
Confidence               3999999999999999999999987 31     21   22332233  4888875  77555566788676543 21


Q ss_pred             cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210        365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY  415 (435)
Q Consensus       365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~  415 (435)
                             +...+++|+..+       .+.+++.++++.+.++++.+++++.
T Consensus       249 -------~~~~~~T~~gnp-------~~~aaa~a~l~~i~~~~l~~~~~~~  285 (364)
T PRK04013        249 -------RGKHGSTFGGNP-------LACKAVAVTLRILRRERLVEKAGEK  285 (364)
T ss_pred             -------CCCcCCCCCcCH-------HHHHHHHHHHHHHHhccHHHHHHHH
Confidence                   112333333222       2347888999999999999888875

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.58  E-value=1.1e-13  Score=144.41  Aligned_cols=226  Identities=13%  Similarity=0.109  Sum_probs=156.1

Q ss_pred             HHHHHHHHHhCCCCCCCCCcccccccC-ChH---hHHHHHHHH-HHhhcCCC-CCCCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210        117 ILELVSNYLARGHYDWKHGRVSGAVYY-YQQ---DLVDLLTEV-FGLTSYTN-PLHPDIFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~l~~~i~~~-~~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      +.+.+.++...+...|.-+...++..- -.|   .+.+..-+. +.. .-++ --.-+.--.......+..+..|+.||+
T Consensus       132 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~k~p~G~~f~~f~Gen~~r~-Dlt~ev~~LddLl~~~G~i~eAe~~AA~~fgA  210 (714)
T PRK15400        132 LTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKS-DISISVSELGSLLDHSGPHKEAEEYIARVFNA  210 (714)
T ss_pred             HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhh-hccccccCCCCCCCCChHHHHHHHHHHHHhCC
Confidence            788899998888888865555443321 122   233322111 111 0110 000011111234556777889999998


Q ss_pred             CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC----cccc----
Q psy10210        191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS----YTVD----  261 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~----~~~d----  261 (435)
                      +.  .-++++|+|.+|..++.+.+.+++.        |+++..+|-+...++...|+.+++++.. +.    +.++    
T Consensus       211 d~--tyfvvNGTS~~n~av~~a~~~~Gd~--------VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~  280 (714)
T PRK15400        211 DR--SYMVTNGTSTANKIVGMYSAPAGST--------VLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEF  280 (714)
T ss_pred             Cc--EEEEeCchHHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCcccc
Confidence            75  4788999999999999999988887        9999999999999999999999999765 22    2345    


Q ss_pred             -HHHHHHHhhcC-----ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        262 -LAALQSAITGN-----TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       262 -~~~l~~~i~~~-----~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                       .+.+++++.++     ++.+++++|++ .|.+.++++|+++|+.++  +++|+||++.... ...  ++ +..... .|
T Consensus       281 ~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F-~p~--~~-~~sam~-~g  352 (714)
T PRK15400        281 QHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNF-SPI--YE-GKCGMS-GG  352 (714)
T ss_pred             CHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhcc-Ccc--cC-CcChhh-cC
Confidence             88999998753     23799999977 999999999999999887  7999999987532 110  10 011111 23


Q ss_pred             c---c--EEEecCCCCCCccCCcEEEEEeCC
Q psy10210        336 V---T--SISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       336 v---d--~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      .   |  +++.|+||.+.+-..+|++.++..
T Consensus       353 a~~~~~i~vtQStHKtL~alTQaS~LHvkg~  383 (714)
T PRK15400        353 RVEGKVIYETQSTHKLLAAFSQASMIHVKGD  383 (714)
T ss_pred             CCCCCceEEEEchhhcccchhHHhHHHHcCC
Confidence            3   4  889999999877788888877653

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.58  E-value=1.8e-13  Score=139.49  Aligned_cols=252  Identities=13%  Similarity=0.034  Sum_probs=157.0

Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      +++|++.+++.+.+.+.......     ....+.+.++.+.+++++.....+.++++++|+||++.|++.++....    
T Consensus        70 h~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tg----  140 (451)
T PRK06918         70 HSHPKVKEALHKQVDQYIHTGFN-----VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK----  140 (451)
T ss_pred             CCCHHHHHHHHHHHHhccCcccc-----ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhC----
Confidence            35999999999998864322111     123456778888888888543224899999999999999999986632    


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCC-----Ccccc-------HHHHHHHh----h-c
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTS-----SYTVD-------LAALQSAI----T-G  271 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~-----~~~~d-------~~~l~~~i----~-~  271 (435)
                        +++|+....+|++....+... +-             .+..+|...     .+..+       ++.+++.+    . +
T Consensus       141 --r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (451)
T PRK06918        141 --RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPE  218 (451)
T ss_pred             --CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCC
Confidence              356888888888865444322 21             123333221     11000       22344433    2 3


Q ss_pred             CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCC
Q psy10210        272 NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHK  345 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK  345 (435)
                      ++.+|+++..+...|.+    +.+++|.++|++||+++|+||+|.+|...     |   ..+.+...+  .|++++  .|
T Consensus       219 ~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~-----g---~~~a~~~~~v~pDi~t~--sK  288 (451)
T PRK06918        219 TIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFART-----G---KYFAIEHFDVVPDLITV--SK  288 (451)
T ss_pred             ceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCcc-----C---ceehhHhcCCCCCEEee--eh
Confidence            56677776655545654    45999999999999999999999988431     2   122222223  476654  58


Q ss_pred             CCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        346 YGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       346 ~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+.+...+|+++.++ ++.+..   .....+++++..+       ...+++.++++.+..+++.+++++..+.+.+.++.
T Consensus       289 ~l~~G~pig~v~~~~-~i~~~~---~~~~~~~T~~g~~-------l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~  357 (451)
T PRK06918        289 SLGAGVPISGVIGRK-EIMDES---APGELGGTYAGSP-------LGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEE  357 (451)
T ss_pred             hhcCCCccEEEEEcH-HHHhcc---CCCCcCcCCCcCH-------HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence            765557789977654 443321   1112222222222       22356677888887788889998888888777766


Q ss_pred             c
Q psy10210        426 L  426 (435)
Q Consensus       426 l  426 (435)
                      +
T Consensus       358 l  358 (451)
T PRK06918        358 M  358 (451)
T ss_pred             H
Confidence            5

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.58  E-value=6.2e-13  Score=138.87  Aligned_cols=221  Identities=14%  Similarity=0.131  Sum_probs=155.7

Q ss_pred             HHHHHHHHHhCCCCCCCCCcccccccC-ChH---hHHHHHHH-HHHhh------cCCCCCCCCcChhHHHHHHHHHHHHH
Q psy10210        117 ILELVSNYLARGHYDWKHGRVSGAVYY-YQQ---DLVDLLTE-VFGLT------SYTNPLHPDIFPGVCKMEAEVIKMCA  185 (435)
Q Consensus       117 i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~l~~~i~~-~~~~~------~~~~~~~~~~~~~~~~~e~~~~~~la  185 (435)
                      +++.+.++...+...|.-+...++..- -.|   .+.+..-+ .++..      ...+.++      ......+..+..|
T Consensus       132 ~~~aL~~y~~~~~~sfh~PGHkgG~~~~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~------~~G~i~eAe~~aA  205 (713)
T PRK15399        132 FTKALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLD------HTGPHLEAEEYIA  205 (713)
T ss_pred             HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCC------CChHHHHHHHHHH
Confidence            788899998888888875555443321 122   33333221 12110      0112222      2345566777889


Q ss_pred             HHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C-C---ccc
Q psy10210        186 RMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S-S---YTV  260 (435)
Q Consensus       186 ~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~-~---~~~  260 (435)
                      +.||++.  .-++++|+|.+|..++.+.+.+++.        |+++..+|-+...++...|+.+++++.. + .   +.+
T Consensus       206 ~~fgAd~--tyfvvNGTS~~n~av~~a~~~~Gd~--------VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I  275 (713)
T PRK15399        206 RTFGAEQ--SYIVTNGTSTSNKIVGMYAAPAGST--------LLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGI  275 (713)
T ss_pred             HHhCCCc--EEEEeCChHHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCC
Confidence            9999975  5788999999999999999998887        9999999999999999999999999754 2 1   234


Q ss_pred             cH-----HHHHHHhhcC-----ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcE-EEeccccchhhhcccccCCCCCCC
Q psy10210        261 DL-----AALQSAITGN-----TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPV-HVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       261 d~-----~~l~~~i~~~-----~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~l-ivD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      +.     +.+++++.++     ++++++++|+. .|.+.++++|.++|   |+.+ |+|+||++... |...  ++ +..
T Consensus       276 ~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~-F~p~--~~-~~s  347 (713)
T PRK15399        276 PRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTH-FHPI--YQ-GKS  347 (713)
T ss_pred             ChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhhh-cCcc--cC-CcC
Confidence            55     8888888643     36899999977 99999999999999   6777 69999998653 2110  10 011


Q ss_pred             CCCC-CCccEE---EecCCCCCCccCCcEEEEEeCC
Q psy10210        330 DFSL-PGVTSI---SVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       330 d~~~-~gvd~~---~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      .... .+.|..   +.|+||.+.+-..+|++.++..
T Consensus       348 am~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~  383 (713)
T PRK15399        348 GMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE  383 (713)
T ss_pred             hhhCCCCCCeeeeeeeehhccccccchheeeeecCC
Confidence            1111 245666   8999999888888999988663

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.58  E-value=1.9e-13  Score=138.24  Aligned_cols=248  Identities=15%  Similarity=0.073  Sum_probs=162.0

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+....        ....+.+.++.+.+++++..  .+.+.++++|+||+..|++.++....     
T Consensus        70 ~~p~v~~ai~~q~~~~~~~--------~~~~~~~~~la~~l~~~~p~--~~~v~f~~sGseA~e~AlklAr~~tg-----  134 (428)
T PRK12389         70 AHPHITKAITEAAENGVLY--------GTPTELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRVARAYTG-----  134 (428)
T ss_pred             CCHHHHHHHHHHHHhCCcc--------CCCCHHHHHHHHHHHHhCCC--CcEEEEeCCHHHHHHHHHHHHHHhhC-----
Confidence            4899999999998763211        11234567777888887742  24899999999999999999987632     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CCEEEE--------Ee--cCCCc----cccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GMKVKH--------IR--LTSSY----TVDLAALQSAIT---GNTVMLVGSMPNFPY  285 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~~v~~--------vp--~~~~~----~~d~~~l~~~i~---~~~~~v~~~~p~npt  285 (435)
                       +++|+....+|++....+... |.....        ++  ..++.    ..|++.+++.+.   +++.+|+++......
T Consensus       135 -r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~  213 (428)
T PRK12389        135 -RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNF  213 (428)
T ss_pred             -CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCC
Confidence             356888888888855443322 211100        00  00000    126888888885   467888888887777


Q ss_pred             ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEe
Q psy10210        286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYR  359 (435)
Q Consensus       286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~  359 (435)
                      |.+.+    +++|.++|++||+++|+||+++|| ..     ++.   +.....|  .|+++++  |.+.+...+|.++.+
T Consensus       214 G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt-----~~~---~a~~~~gv~PDivt~g--K~lggG~Pi~av~~~  282 (428)
T PRK12389        214 GIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RF-----MYG---GAQDLLGVEPDLTALG--KIIGGGLPIGAYGGR  282 (428)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-cc-----Ccc---hhhHHhCCCCCeeeec--hhhcCCCceeEEeEH
Confidence            88755    999999999999999999999988 32     111   0111112  4777665  875555667886554


Q ss_pred             CCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        360 DLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       360 ~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       +++.+......+.+.+++|+     |  +..+.+++.++++.+.++++.++++++.+++++.++++
T Consensus       283 -~~i~~~~~~~~~~~~~~T~~-----g--npl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l  341 (428)
T PRK12389        283 -KDIMEQVAPLGPAYQAGTMA-----G--NPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEA  341 (428)
T ss_pred             -HHHHhhhccCCCcccccCCc-----c--CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence             45543311011122333322     2  22334788899999988889999999999988887764

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.58  E-value=1.4e-13  Score=138.93  Aligned_cols=267  Identities=14%  Similarity=0.052  Sum_probs=167.0

Q ss_pred             CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...+++.   -+++|++.+++.+.+.+......   .  ....+...++.+.+++++.....+.++++++|||
T Consensus        38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~---~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGse  112 (421)
T PRK06777         38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY---Q--IVPYASYVTLAERINALAPIDGPAKTAFFTTGAE  112 (421)
T ss_pred             CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc---c--ccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHH
Confidence            34455444333222   23589999999999887432211   0  1122344567777888775322247899999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCc-----cccHHHH
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSY-----TVDLAAL  265 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~-----~~d~~~l  265 (435)
                      |+..|++.++....      +++|+....+|++....+... +.             .+..+|.....     ..+++.+
T Consensus       113 A~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l  186 (421)
T PRK06777        113 AVENAVKIARAYTG------RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSV  186 (421)
T ss_pred             HHHHHHHHHHHhhC------CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHH
Confidence            99999999886532      456888888888865444322 21             11222222110     1236667


Q ss_pred             HHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210        266 QSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG-  335 (435)
Q Consensus       266 ~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g-  335 (435)
                      ++.+.     +++.+|+++...+..|..    +.+++|.++|++||+++|+||+|.||..     .|   ..+.....+ 
T Consensus       187 ~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr-----~g---~~~~~~~~~~  258 (421)
T PRK06777        187 ERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFAR-----TG---KLFAMEYYDV  258 (421)
T ss_pred             HHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCcc-----CC---chhhhhhcCC
Confidence            77774     357888888888877854    5699999999999999999999998633     12   122222223 


Q ss_pred             -ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        336 -VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       336 -vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                       .|++++  .|.+.+...+|+++.+ +++.+..   .....+++     ..+  +....+++.++++.+..+++.+++++
T Consensus       259 ~pDiv~~--sK~l~~G~pigav~~~-~~i~~~~---~~~~~~~T-----~~~--~p~~~aaa~a~L~~~~~~~l~~~~~~  325 (421)
T PRK06777        259 KPDLITM--AKSLGGGMPISAVVGR-AEVMDAP---APGGLGGT-----YAG--NPLAVAAALAVLDVIAEEKLCQRALI  325 (421)
T ss_pred             CCCEEee--ehhhcCCCceEEEEEc-HHHHhcc---CCCCCCCC-----CCc--CHHHHHHHHHHHHHHHhccHHHHHHH
Confidence             476654  5875444668887765 4444331   11122222     222  22334677888888877888889988


Q ss_pred             HHHHHHHHHHhc
Q psy10210        415 YHFNYKSCLQNL  426 (435)
Q Consensus       415 ~~~~~~~~~~~l  426 (435)
                      ..+++.+.++++
T Consensus       326 ~g~~l~~~L~~l  337 (421)
T PRK06777        326 LGAHLVEVLEKA  337 (421)
T ss_pred             HHHHHHHHHHHH
Confidence            888888887765

>PRK06105 aminotransferase; Provisional

Probab=99.57  E-value=2e-13  Score=139.11  Aligned_cols=280  Identities=15%  Similarity=0.085  Sum_probs=171.3

Q ss_pred             CCCCCCCCCcccc---cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSG---AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~---~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+.   ..-+++|++.+++.+++.+..+.+..    .....+.+.++.+.+++++..+- +.++++++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs  119 (460)
T PRK06105         45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTF----SHKSHGPVIDLAEKLVAMAPVPM-SKVFFTNSGS  119 (460)
T ss_pred             CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecc----cccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence            3445555443332   22234899999999998874322211    11234556677788888875322 4799999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCcc----------
Q psy10210        204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSYT----------  259 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~~----------  259 (435)
                      ||+..|++.++..... +|. .+.+|+....+|++....+.. .+.            .+..+|......          
T Consensus       120 eAve~AlKlar~~~~~-~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  198 (460)
T PRK06105        120 EANDTVVKLVWYYNNA-LGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEA  198 (460)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHH
Confidence            9999999998765432 343 356788888887775433221 111            122333211100          


Q ss_pred             ---ccHHHHHHHhh----cCceEEEEeCCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        260 ---VDLAALQSAIT----GNTVMLVGSMPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       260 ---~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                         ...+++++.+.    +++++|++.......|.+.    .++++.++|++||+++|+||++.||-..     |   ..
T Consensus       199 ~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRt-----G---~~  270 (460)
T PRK06105        199 FATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRT-----G---NM  270 (460)
T ss_pred             HHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcC-----c---hh
Confidence               12456777763    3578888888777667763    4999999999999999999999887331     2   12


Q ss_pred             CCCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCC-CCCccccCCCchHHHHHHHHHHHhc
Q psy10210        329 FDFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNY-GSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       329 ~d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~-~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                      +.+...|  .|+++++  |.+.+. .+.|.++.++ ++.+...  ......+.+ -..|..|  +..+.+++.++|+.+.
T Consensus       271 f~~~~~~v~PDi~~~g--K~lggG~~P~~av~~~~-~i~~~~~--~~~~~~~~~~h~~T~~g--npl~~aaa~a~L~~i~  343 (460)
T PRK06105        271 FGCETFGIKPDILVMS--KQLSSSYQPLSAVLMNE-KVYDPIA--DESGKIGTFGHGFTASG--HPVAAAVALENLAIIE  343 (460)
T ss_pred             hhHHhcCCCCCeeeee--cccccCcccceEEEEcH-HHHHHHh--cccccCcccccCCCCCC--CHHHHHHHHHHHHHHH
Confidence            2233333  4888776  775443 3567767664 4432210  000100100 0112222  2233467888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        405 FEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       405 ~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++++.+++++..+.+++.++++.
T Consensus       344 ~~~l~~~v~~~g~~l~~~L~~l~  366 (460)
T PRK06105        344 ERDLVGNAAERGARLQARLRALA  366 (460)
T ss_pred             hccHHHHHHHHHHHHHHHHHHhh
Confidence            89999999999999998888763

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.57  E-value=6.1e-14  Score=138.24  Aligned_cols=260  Identities=11%  Similarity=-0.024  Sum_probs=168.9

Q ss_pred             CcccccccCChHh-HHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHH
Q psy10210        135 GRVSGAVYYYQQD-LVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKA  212 (435)
Q Consensus       135 ~~~~~~~~~g~~~-l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a  212 (435)
                      +.++-++....|. +.+++.+.+-       -..+..|.+.++..++.+.+.++++.+.+ ..+++++|||.++..++.+
T Consensus         5 ~~f~~gp~~~~~~~~~~~~~~~~~-------~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~n   77 (374)
T TIGR01365         5 PCFSSGPCAKRPGWSIEELKNAPL-------GRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWS   77 (374)
T ss_pred             CCcCCCccCCCchhhHHHHhhhhc-------ccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHH
Confidence            3444444444565 5555544322       22356889999999999999999997543 3467799999999999999


Q ss_pred             HHH-HhhhhcCCCCCeEEEeCCCchh-HH-HHHHHcCC-EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210        213 YRD-YAREEKGISLPEIVLPTTAHPA-FD-KAANYFGM-KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       213 ~~~-~~~~~~g~~~~~viv~~~~~~~-~~-~~~~~~g~-~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~  288 (435)
                      +.. +++.        +++.. .|.. +. +.++..|+ ++..+..+.+..+|+++++.  .   +.|++++..+.||+.
T Consensus        78 l~~~~g~~--------vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~  143 (374)
T TIGR01365        78 MLGCRGVD--------VLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K---NDVVFTWNGTTSGVR  143 (374)
T ss_pred             cCCCCCCe--------EEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C---CCEEEecCCCchhee
Confidence            873 4544        77654 3333 34 88888999 47888766666789988873  1   226788999999999


Q ss_pred             cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccc
Q psy10210        289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQY  368 (435)
Q Consensus       289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~  368 (435)
                      .|++++.+.+  ++++++||++.+-+           ..++++.  ++|++..+++|.+.+|.|.|++.++++.+.....
T Consensus       144 npv~~i~~~~--~~~lliVDavSs~g-----------~~~l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~  208 (374)
T TIGR01365       144 VPNGDFIPAD--REGLTICDATSAAF-----------AQDLDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLES  208 (374)
T ss_pred             cccccccccc--CCCcEEEEccchhc-----------CCCCChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhh
Confidence            9987666332  58999999996533           2366665  4999999999999999999999999887643210


Q ss_pred             -cccCCCCC-------CC----CCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        369 -FVTSDWPG-------GN----YGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       369 -~~~~~~~g-------g~----~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                       ....+|..       +.    ....+...+.+...+.++..+++.+..+ |+.++.+++.+..+...+.++++.
T Consensus       209 ~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg  283 (374)
T TIGR01365       209 YTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNN  283 (374)
T ss_pred             cCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCC
Confidence             00001111       00    0011222233333343444445544444 677777777666666665555443

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.56  E-value=2.6e-13  Score=132.19  Aligned_cols=260  Identities=14%  Similarity=0.076  Sum_probs=178.5

Q ss_pred             CCCCCCCCcccccccC-C--hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVYY-Y--QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~~-g--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+-..++++.. |  +|.+.+++.+.+++-.        .+..-.+.|.++.+.+.++++.-  +.+-++++|||
T Consensus        51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~--------~fg~Pte~Ei~~Aell~~~~p~~--e~vrfvnSGTE  120 (432)
T COG0001          51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL--------SFGAPTELEVELAELLIERVPSI--EKVRFVNSGTE  120 (432)
T ss_pred             CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC--------CCCCCCHHHHHHHHHHHHhcCcc--cEEEEecchhH
Confidence            4444444333333332 3  8999999999988731        12334688999999999998543  47999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cC--C-----------------EEEEEecCCCccccHHH
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-FG--M-----------------KVKHIRLTSSYTVDLAA  264 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g--~-----------------~v~~vp~~~~~~~d~~~  264 (435)
                      |.+.|++.+|....      +++|+..+-+|++..+.+.. .|  .                 .++.+|.     -|++.
T Consensus       121 AtmsAiRlARa~Tg------R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-----ND~~a  189 (432)
T COG0001         121 ATMSAIRLARAYTG------RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-----NDLEA  189 (432)
T ss_pred             HHHHHHHHHHHhhC------CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-----CCHHH
Confidence            99999999986654      36799898888885544333 22  1                 1222332     28999


Q ss_pred             HHHHhhc---CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        265 LQSAITG---NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       265 l~~~i~~---~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                      +++++.+   +..+|++......-|.+    +.+++|.++|++||+.+|.||+..||-.++....++    +..   ..|
T Consensus       190 l~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~----~gi---~PD  262 (432)
T COG0001         190 LEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY----YGV---EPD  262 (432)
T ss_pred             HHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccc----cCc---Ccc
Confidence            9998875   57888888766667887    568999999999999999999999987754332221    111   125


Q ss_pred             EEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHH
Q psy10210        338 SISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYH  416 (435)
Q Consensus       338 ~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~  416 (435)
                      +.++.  |..+|..++|+ +..++++.+......+-++.|+     +.|  +..++++..++++.+.. ++..+++.+..
T Consensus       263 lttlG--KiIGGGlP~ga-~gGr~eiM~~~~p~g~vyqaGT-----~sg--nplamaAG~atl~~l~~~~~~y~~l~~~~  332 (432)
T COG0001         263 LTTLG--KIIGGGLPIGA-FGGRAEIMEQLAPLGPVYQAGT-----LSG--NPLAMAAGLATLEELMTEEGVYERLDALG  332 (432)
T ss_pred             hhhhh--hhhcCCcceee-eccHHHHHhhhCCCCCccccCC-----CCC--cHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence            55555  98878888888 5566677665333334444443     333  44566889999998876 46777777777


Q ss_pred             HHHHHHHHh
Q psy10210        417 FNYKSCLQN  425 (435)
Q Consensus       417 ~~~~~~~~~  425 (435)
                      +.+.+-+++
T Consensus       333 ~~L~~gl~~  341 (432)
T COG0001         333 ERLAEGLRA  341 (432)
T ss_pred             HHHHHHHHH
Confidence            777766654

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.56  E-value=3e-13  Score=137.47  Aligned_cols=249  Identities=18%  Similarity=0.048  Sum_probs=160.7

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+..+....     -...+...++.+.++++++... +.+.++++|+||+..|++.++....     
T Consensus        70 ~~p~i~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tg-----  138 (457)
T PRK05639         70 SHPKLVKAVQEQVALIQHSMIG-----YTHSERAIRVAEKLAEISPIEN-PKVLFGLSGSDAVDMAIKVSKFSTR-----  138 (457)
T ss_pred             CCHHHHHHHHHHHHhccccccC-----ccCCHHHHHHHHHHHhhCCCCc-CEEEEeCchHHHHHHHHHHHHHhcC-----
Confidence            4899999999998864222111     0113455667778888775332 3899999999999999999986532     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcc--------cc--------HHHHHHHh----
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYT--------VD--------LAALQSAI----  269 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~--------~d--------~~~l~~~i----  269 (435)
                       +++|+....+|++....+... +.             .+..+|.+....        -|        ++.+++.+    
T Consensus       139 -r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~  217 (457)
T PRK05639        139 -RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHV  217 (457)
T ss_pred             -CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhh
Confidence             456888888888854433221 11             244455432111        02        23455544    


Q ss_pred             --hcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEe
Q psy10210        270 --TGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISV  341 (435)
Q Consensus       270 --~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~  341 (435)
                        .+++.+|+++......|.+    +.+++|.++|++||+++|+||+++||-.     .|   ..+.....|  .|++++
T Consensus       218 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr-----tG---~~~a~~~~gv~PDiv~~  289 (457)
T PRK05639        218 VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGR-----TG---KWFASEWFEVKPDLIIF  289 (457)
T ss_pred             cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc-----Cc---hHHHHHhcCCCCCEEEe
Confidence              2467888888877766765    5699999999999999999999988632     12   122222222  488886


Q ss_pred             cCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        342 DTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       342 s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                      +  |.+.+..++|+++.++ ++.+.    .....+++     ..+  +....+++.++++.+..+++.+++++..+++++
T Consensus       290 g--K~l~gG~pi~av~~~~-~i~~~----~~~~~~~T-----~~g--~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~  355 (457)
T PRK05639        290 G--KGVASGMGLSGVIGRK-ELMDL----TSGSALLT-----PAA--NPVISAAAEATLEIIEEENLLKNALKVGEFIKK  355 (457)
T ss_pred             c--hhhcCCCcceeEEehH-HHHhh----cCCCcccC-----CCc--CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence            4  8765557778866654 44331    11111122     222  223346888899999999999999999888888


Q ss_pred             HHHhc
Q psy10210        422 CLQNL  426 (435)
Q Consensus       422 ~~~~l  426 (435)
                      .++++
T Consensus       356 ~L~~l  360 (457)
T PRK05639        356 RLLEM  360 (457)
T ss_pred             HHHHH
Confidence            87765

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.56  E-value=9.8e-14  Score=140.59  Aligned_cols=263  Identities=14%  Similarity=0.052  Sum_probs=158.3

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+.+..   +++|++.+++.+++.+..   .+     ....+...++++.+++.+...  +.+++|+||+|
T Consensus        46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~-----~~~~~~~~~lae~l~~~~~~~--~~v~~~~sGse  115 (423)
T TIGR00713        46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT---SY-----GAPTEAEILLAKEIISRVPSV--EMVRFVNSGTE  115 (423)
T ss_pred             CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC---cC-----CCCCHHHHHHHHHHHHhCCcc--cEEEEeCCHHH
Confidence            444555443333232   358999999999887621   11     112234566777777777542  47999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc---CCEEEEEecCC---------Cc---cccHHHHHHHh
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLTS---------SY---TVDLAALQSAI  269 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~---g~~v~~vp~~~---------~~---~~d~~~l~~~i  269 (435)
                      |+..|++.++....      +++|+..+++|+++...+...   +......|..+         ..   ..|++++++++
T Consensus       116 A~e~Alk~ar~~~g------r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i  189 (423)
T TIGR00713       116 ATMSAVRLARGYTG------RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVF  189 (423)
T ss_pred             HHHHHHHHHHHhhC------CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHH
Confidence            99999999876532      357999999999865433321   11110011000         00   12789999988


Q ss_pred             h---cCceEEEEe-CCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe
Q psy10210        270 T---GNTVMLVGS-MPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV  341 (435)
Q Consensus       270 ~---~~~~~v~~~-~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~  341 (435)
                      .   +++++|+++ .++| +|.+.    .+++|.++|++||+++|+||+|.++....   .+. ...++.   ..|++  
T Consensus       190 ~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~---~~~-~~~~~~---~pDi~--  259 (423)
T TIGR00713       190 EEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL---GGA-QEYFGV---EPDLT--  259 (423)
T ss_pred             HHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc---chh-HHHhCC---Ccchh--
Confidence            7   567888886 6666 78773    38999999999999999999998873310   010 001111   13544  


Q ss_pred             cCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        342 DTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       342 s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                      ++.|.+.+...+|+++.++ ++.+........+.+++++.       +....+++.++++.+..+++.+++++..+.+++
T Consensus       260 t~sK~l~~G~pig~v~~~~-~i~~~~~~~~~~~~~~T~~~-------~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~  331 (423)
T TIGR00713       260 TLGKIIGGGLPVGAFGGRR-EIMERLAPEGPVYQAGTLSG-------NPLAMAAGLATLKLLDEEGVYTELDELAKRLAE  331 (423)
T ss_pred             hhhhhhcCCCceeeeeEHH-HHHHhhCcCCCeeeccCCCC-------CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence            4568754445578866654 44433111111122222222       222336777888888766677777777777665


Q ss_pred             HHH
Q psy10210        422 CLQ  424 (435)
Q Consensus       422 ~~~  424 (435)
                      .++
T Consensus       332 ~l~  334 (423)
T TIGR00713       332 GLS  334 (423)
T ss_pred             HHH
Confidence            554

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.56  E-value=3.3e-13  Score=137.33  Aligned_cols=250  Identities=14%  Similarity=0.046  Sum_probs=159.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.....      .....+...++.+.++++++... +.++++++|+||+..|++.++....     
T Consensus        88 ~~p~v~~Ai~~ql~~~~~~~------~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~tg-----  155 (459)
T PRK06082         88 GHPHVIEKVKEQMAKLPFSP------RRFTNETAIECAEKLTEIAGGEL-NRVLFAPGGTSAIGMALKLARHITG-----  155 (459)
T ss_pred             CCHHHHHHHHHHHHhCCCcc------CccCCHHHHHHHHHHHHhCCCCC-CEEEECCCcHHHHHHHHHHHHHhcC-----
Confidence            58999999999988643221      11224666778888888885322 4899999999999999999886532     


Q ss_pred             CCCeEEEeCCCchhHHH-HHHHcCC------------EEEEEecCCCcc-----c------cHHHHHHHhh--cCceEEE
Q psy10210        224 SLPEIVLPTTAHPAFDK-AANYFGM------------KVKHIRLTSSYT-----V------DLAALQSAIT--GNTVMLV  277 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~-~~~~~g~------------~v~~vp~~~~~~-----~------d~~~l~~~i~--~~~~~v~  277 (435)
                       +++|+.....|++... +....|.            .+..+|......     .      +++.+++.+.  +++.+|+
T Consensus       156 -r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavI  234 (459)
T PRK06082        156 -NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFI  234 (459)
T ss_pred             -CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEE
Confidence             3568877777777443 3322221            123343211110     1      1355777775  3577888


Q ss_pred             EeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCcc-C
Q psy10210        278 GSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTP-K  351 (435)
Q Consensus       278 ~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p-~  351 (435)
                      +....+..+.+   +.+++|.++|++||+++|+||+++||-.     .|   ..+.+...|  .|+++++  |.+.+. .
T Consensus       235 vEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GR-----tG---~~fa~e~~gv~PDiv~~g--Kgl~gG~~  304 (459)
T PRK06082        235 AEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGR-----TG---EWFTHQAYGIEPDILCIG--KGLGGGLV  304 (459)
T ss_pred             ECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----cc---hhhHhHhhCCCCCEEEec--ccccCCCC
Confidence            88776643223   3499999999999999999999998632     22   223333334  4888754  875554 3


Q ss_pred             CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        352 GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       352 g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .+|.++.+++ +....   ...+.     ..|..|  +..+.+++.++++.+.++++.++++++.+++++.++++.
T Consensus       305 P~~av~~~~~-i~~~~---~~~~~-----~~T~~g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~  369 (459)
T PRK06082        305 PIAAMITKDK-YNTAA---QISLG-----HYTHEK--SPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMK  369 (459)
T ss_pred             cceEEEEcHH-HHhhc---cCCCC-----CCCCCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            5788677654 32211   11010     112222  223346888899999888899999999999888887653

>KOG1401|consensus

Probab=99.55  E-value=4.2e-13  Score=127.98  Aligned_cols=258  Identities=12%  Similarity=0.009  Sum_probs=175.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+.++.....     ...+.+ ..++.+.+.+..+-...+.+.++++||||+..|++.+++....+.+.
T Consensus        73 anpev~ral~~q~~k~~hs~~-----~~~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~  146 (433)
T KOG1401|consen   73 ANPEVARALAEQAKKLGHSSN-----GYFTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPE  146 (433)
T ss_pred             CCHHHHHHHHHHHhhheeccC-----ccccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCc
Confidence            489999999999988644321     112223 44555556665544455689999999999999999999877664444


Q ss_pred             CCCeEEEeCCCchhH-HHHHHHcCCEEEEEecC---CC----ccccHHHHHHHhhcC---ceEEEEeCCCCCcccc----
Q psy10210        224 SLPEIVLPTTAHPAF-DKAANYFGMKVKHIRLT---SS----YTVDLAALQSAITGN---TVMLVGSMPNFPYGTM----  288 (435)
Q Consensus       224 ~~~~viv~~~~~~~~-~~~~~~~g~~v~~vp~~---~~----~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~----  288 (435)
                      ++..+|....+|++- .-++...+..-...|.+   ++    -.-|..++++.++..   .++|++...+-..|.+    
T Consensus       147 ~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~p  226 (433)
T KOG1401|consen  147 KKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADP  226 (433)
T ss_pred             cceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCH
Confidence            445588777777773 33333223333333321   11    113688899988754   5899999888777777    


Q ss_pred             cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      +.+..|.++|+++|+++|.||++.||...     |   ..+.....++  |++++.  |.+.+..+.|+.+++++-.. .
T Consensus       227 eFl~~L~k~C~~~~vl~I~DEV~tG~gR~-----g---~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~~-~  295 (433)
T KOG1401|consen  227 EFLIGLRKECDDNGVLLIFDEVQTGLGRL-----G---YGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVAE-M  295 (433)
T ss_pred             HHHHHHHHHHhhcCceEEeehhhhCcccc-----c---hHHHHHHhCcCCcceeeh--hhccCCceeEEEeehHHHHh-h
Confidence            56889999999999999999999987431     2   2333333344  777766  88767788899888876432 2


Q ss_pred             cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        367 QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       367 ~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ...-.+-+.|++|+..++++       .++..+|+.+......+++.++...+++++.+
T Consensus       296 i~~~~~l~hg~Tf~gnpLac-------sa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e  347 (433)
T KOG1401|consen  296 ISPGDHLYHGGTFSGNPLAC-------SAGIKVLDELKDPETLKNVSKIGKELRKLLDE  347 (433)
T ss_pred             cCCCCccccCcccCCChhhh-------hHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence            11112334577766666655       56778899999999999998888888877764

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.55  E-value=5.6e-13  Score=132.89  Aligned_cols=244  Identities=16%  Similarity=0.078  Sum_probs=149.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+...... +     .....+++.++.+.++    ..++..++++++|+||+..+++.++....      
T Consensus        46 ~p~v~~a~~~~~~~~~~~-~-----~~~~~~~~~~la~~l~----~~~~~~~~~~~SGseA~~~Al~~ar~~~~------  109 (375)
T PRK04260         46 HPQVQQALQKQAGLIWHS-P-----NLYLNSLQEEVAQKLI----GDKDYLAFFCNSGAEANEAAIKIARKATG------  109 (375)
T ss_pred             CHHHHHHHHHHHHhcCcc-c-----CccCCHHHHHHHHHHh----cCcCCEEEEcCccHHHHHHHHHHHHHhcC------
Confidence            788999999988764221 1     1122334444444332    23333468999999999999999875422      


Q ss_pred             CCeEEEeCCCchh-HHHHHHHcCCEEE---------EEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccccc----C
Q psy10210        225 LPEIVLPTTAHPA-FDKAANYFGMKVK---------HIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD----D  290 (435)
Q Consensus       225 ~~~viv~~~~~~~-~~~~~~~~g~~v~---------~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~----~  290 (435)
                      +++|++.+..|++ ...++...|.+..         .++..  -..|++++++.+.+++++|+++++++++|.+.    .
T Consensus       110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~  187 (375)
T PRK04260        110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDF  187 (375)
T ss_pred             CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHH
Confidence            3458887777665 3344433332211         11110  12489999999888889999999999999983    4


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV  370 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~  370 (435)
                      ++++.++|+++|+++++|++|.++..     .|.. ..+.......|++  ++.|.+.+...+|+++.++ ++.+..   
T Consensus       188 l~~~~~l~~~~~~~~i~De~~~g~g~-----~g~~-~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~-~~~~~~---  255 (375)
T PRK04260        188 VKALADYCQETGILLIVDEVQTGMGR-----TGKL-YAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS-SLGGAF---  255 (375)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCc-----ccch-hhhHhhCCCCCEE--EecccccCCcceEEEEEcH-HHHhhc---
Confidence            89999999999999999999987532     1211 0111111124655  4569754335678877764 443221   


Q ss_pred             cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ......+     +..+  +....+++.++++.+..+++.+++++..+.+++.+.+
T Consensus       256 ~~~~~~~-----t~~~--~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~  303 (375)
T PRK04260        256 GYGSHGS-----TFGG--NKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQK  303 (375)
T ss_pred             CCCCCCC-----CCCc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            1111111     2222  2223456777788877778888888877777766654

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.55  E-value=3.9e-13  Score=136.82  Aligned_cols=267  Identities=14%  Similarity=0.119  Sum_probs=168.0

Q ss_pred             CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC--CceEEcCC
Q psy10210        127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE--TCGCMTSG  201 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~--~~~~~t~g  201 (435)
                      .++..|.+...+++..   +++|++.+++.+.+.+.......     ....+.+.++.+.+++++.....  ..++++++
T Consensus        55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S  129 (459)
T PRK06931         55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL-----DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS  129 (459)
T ss_pred             CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc-----ccCCHHHHHHHHHHHHhCCCccccceEEEeCCC
Confidence            3455555544443332   34899999999988752111110     12346667788888888753321  13466689


Q ss_pred             hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCcc--------c
Q psy10210        202 GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYT--------V  260 (435)
Q Consensus       202 gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~--------~  260 (435)
                      |+||+..|++.++....      +++|+....+|++....+... +            ..+..+|....+.        -
T Consensus       130 GsEAve~AlklAr~~tg------r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (459)
T PRK06931        130 GADAVEAAIKLAKTYTG------RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA  203 (459)
T ss_pred             cHHHHHHHHHHHHHhcC------CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchh
Confidence            99999999999886532      456898888888866554422 1            1233444322111        1


Q ss_pred             cHHHH----HHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        261 DLAAL----QSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       261 d~~~l----~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      +.+.+    ++.+.      +++.+|++.......|.+    +.++++.++|++||+++|.||++.||-.     .|   
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGR-----tG---  275 (459)
T PRK06931        204 GVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFAR-----TG---  275 (459)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCc-----Cc---
Confidence            22322    33332      247888888777666765    5699999999999999999999998732     12   


Q ss_pred             CCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        327 PPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       327 ~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                      ..+.+...|  .|+++++  |.+.+..++|+++.++ ++ +.   +.+...+++|+..+       .+.+++.++|+.+.
T Consensus       276 ~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~-~~-~~---~~~~~~~~T~~gnp-------la~aaala~L~~l~  341 (459)
T PRK06931        276 KMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK-EF-DA---WQPGGHTGTFRGNQ-------LAMATGLTTLKILK  341 (459)
T ss_pred             hHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH-HH-hh---ccCCCCCCCCCCCH-------HHHHHHHHHHHHHH
Confidence            233333334  4888886  7655556678866553 33 21   12222333333222       33478889999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        405 FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       405 ~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ++++.+++++..+++.+.++++
T Consensus       342 ~~~l~~~~~~~G~~l~~~L~~l  363 (459)
T PRK06931        342 EENLAQNAAERGEWLKAQLAEL  363 (459)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999988888765

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.55  E-value=3.8e-13  Score=133.57  Aligned_cols=189  Identities=15%  Similarity=0.085  Sum_probs=126.7

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMK  248 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~  248 (435)
                      .|.+.++|.    .+++++|.+   .++.|++||.|+.+++.....+|+         ++ +...|.....+ ....|+.
T Consensus        77 d~s~~~LE~----~vAe~lG~e---~aV~v~sGTaAl~ll~~l~v~pGd---------~V-p~n~~f~Tt~ahI~~~Ga~  139 (460)
T PRK13237         77 SRNFYHLEE----TVQEYYGFK---HVVPTHQGRGAENLLSRIAIKPGQ---------YV-PGNMYFTTTRYHQELNGGI  139 (460)
T ss_pred             CCcHHHHHH----HHHHHHCCC---eEEEeCCHHHHHHHHHHhCCCCcC---------EE-CCccchHhhHHHHHhCCcE
Confidence            355666665    456667764   579999999999986544333333         33 55556655555 7777886


Q ss_pred             EEEEec----------CCCccccHHHHHHHhhcC----ceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210        249 VKHIRL----------TSSYTVDLAALQSAITGN----TVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDCC  310 (435)
Q Consensus       249 v~~vp~----------~~~~~~d~~~l~~~i~~~----~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~~  310 (435)
                      .+.++.          ..+|.+|+++++++|+++    +.++.+..++|..| ..   +++++|.++|++||++||.|+|
T Consensus       140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaA  219 (460)
T PRK13237        140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDAT  219 (460)
T ss_pred             EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECc
Confidence            555531          146889999999999753    45677777788774 44   5899999999999999999999


Q ss_pred             ccchhhhccc--ccCCCCCCCC----CCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210        311 LGGFLAPFMS--AAGYPLPPFD----FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG  376 (435)
Q Consensus       311 ~~~~~~~~~~--~~g~~~~~~d----~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g  376 (435)
                      +......|.+  ..|+...+..    -.....|.+++|+||.+.+|.| |+++++++++.++.......|.|
T Consensus       220 ra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG  290 (460)
T PRK13237        220 RCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVYEG  290 (460)
T ss_pred             chhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhccccCC
Confidence            8654222221  1223222211    0012369999999999888775 88899999887765444445544

>KOG0053|consensus

Probab=99.54  E-value=1.4e-13  Score=133.22  Aligned_cols=158  Identities=22%  Similarity=0.167  Sum_probs=126.4

Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCC
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTS  256 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~  256 (435)
                      .+.++.+-|+.   ..+++++|..|+..++..+...++.        |++.+..|....    +....+|++...+.++ 
T Consensus        83 e~~iaal~ga~---~~l~fsSGmaA~~~al~~L~~~g~~--------iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-  150 (409)
T KOG0053|consen   83 ESGIAALEGAA---HALLFSSGMAAITVALLHLLPAGDH--------IVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-  150 (409)
T ss_pred             HHHHHHHhCCc---eEEEecccHHHHHHHHHHhcCCCCc--------EEEeCCCcccHHHHHHHHHHHhCceeeeechh-
Confidence            34556666554   4788899999999999999977776        999998888854    4455668888888764 


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                          |++++++++.++|++|++..|+||+..+-||++|+++|+++|+.++||+..+++..            .+....|+
T Consensus       151 ----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~------------~~pL~lGA  214 (409)
T KOG0053|consen  151 ----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN------------QDPLPLGA  214 (409)
T ss_pred             ----hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc------------cChhhcCC
Confidence                68899999999999999999999999999999999999999999999999876522            34445589


Q ss_pred             cEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      |+++-|..||+.|-..  .|+++.+.+++.+.
T Consensus       215 DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~  246 (409)
T KOG0053|consen  215 DIVVHSATKYIGGHSDVIGGSVVLNSEELASR  246 (409)
T ss_pred             CEEEEeeeeeecCCcceeeeEEecCcHHHHHH
Confidence            9999999999766533  36656655665544

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.54  E-value=3.6e-13  Score=135.90  Aligned_cols=274  Identities=13%  Similarity=-0.004  Sum_probs=169.1

Q ss_pred             CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+.++   -+++|++.+++.+++.+..+...     .....+.+.++.+.+++++...- +.++++++|+|
T Consensus        42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGse  115 (429)
T PRK06173         42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-----GGFTHEPAVELAQKLLEILPPSL-NKIFFADSGSV  115 (429)
T ss_pred             CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-----cccCCHHHHHHHHHHHhhCCCCc-CEEEEeCCchH
Confidence            45555554433222   23489999999999887432211     11123556778888888774322 48999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCC-c-----cccHH
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSS-Y-----TVDLA  263 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~-~-----~~d~~  263 (435)
                      |+..|++.++..... +|. .+++|+....+|++..-.+... +-             .+..+|.... .     .-+++
T Consensus       116 Ave~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  194 (429)
T PRK06173        116 AVEVAMKMALQYQQA-KGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE  194 (429)
T ss_pred             HHHHHHHHHHHHHHH-hCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence            999999999876543 342 3567888888888743222111 10             1233433211 0     11466


Q ss_pred             HHHHHhh---cCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        264 ALQSAIT---GNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       264 ~l~~~i~---~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+++.+.   +++.+|+++.. +...|.+    +.++++.++|++||+++|+||++.||-.     .|.   .+.....|
T Consensus       195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr-----tG~---~~a~~~~g  266 (429)
T PRK06173        195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGR-----TGK---LFALEHAG  266 (429)
T ss_pred             HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCc-----CCc---chHHHhcC
Confidence            6777775   46788888874 6656665    6799999999999999999999987522     232   22222223


Q ss_pred             --ccEEEecCCCCCCcc-CCcEEEEEeCCcccccccc-cc-CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210        336 --VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYF-VT-SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW  410 (435)
Q Consensus       336 --vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~-~~-~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~  410 (435)
                        .|++++  .|.+.+. ..+|.++.++ ++.+.... .. ....+++     ..+  +...++++.++++.+.++++.+
T Consensus       267 v~PDiv~~--gK~l~gG~~p~~a~~~~~-~i~~~~~~~~~~~~~~~~T-----~~g--~p~~~aaa~a~l~~i~~~~~~~  336 (429)
T PRK06173        267 VVPDIMCI--GKALTGGYLTLSATITTE-AIAQTICSGEAKCFMHGPT-----FMA--NPLACAIAAESIRLLLESPWQQ  336 (429)
T ss_pred             CCCCEEEe--ehhhhCCccccceEEecH-HHHHHHhcCCCCccccCCC-----CCc--CHHHHHHHHHHHHHHHhCCHHH
Confidence              477775  4865444 3567756554 33322100 00 0112222     222  2344578889999998888899


Q ss_pred             HHHHHHHHHHHHHHhc
Q psy10210        411 ICVRYHFNYKSCLQNL  426 (435)
Q Consensus       411 ~~~~~~~~~~~~~~~l  426 (435)
                      +++++.+++++.++++
T Consensus       337 ~~~~~g~~l~~~L~~~  352 (429)
T PRK06173        337 NIQRIEAQLKQELAPA  352 (429)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999888877754

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.53  E-value=4.1e-13  Score=136.63  Aligned_cols=260  Identities=11%  Similarity=0.021  Sum_probs=166.4

Q ss_pred             CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...++++   -+++|++.+++.+.+.+...   +     ....+.+.++.+.+++.+..  .+.+.++++||
T Consensus        96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~---~-----~~~~~~~~~lAe~l~~~~p~--~~~v~f~~SGs  165 (474)
T PLN02482         96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS---F-----GAPCLLENVLAEMVIDAVPS--VEMVRFVNSGT  165 (474)
T ss_pred             CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC---C-----CCCCHHHHHHHHHHHHhCCC--CCEEEEeCChH
Confidence            344555444333322   22489999999999886321   1     12346677888888888743  34899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH-Hc--CC-----------------EEEEEecCCCccccHH
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN-YF--GM-----------------KVKHIRLTSSYTVDLA  263 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~--g~-----------------~v~~vp~~~~~~~d~~  263 (435)
                      ||++.|++.++....      +++|+....+|+++..... ..  +.                 .+..+|.     -|++
T Consensus       166 EA~e~AlklAR~~tg------r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~  234 (474)
T PLN02482        166 EACMGVLRLARAYTG------REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLE  234 (474)
T ss_pred             HHHHHHHHHHHHhcC------CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChH
Confidence            999999999986632      3568888888888543211 10  10                 0111111     2788


Q ss_pred             HHHHHhh---cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210        264 ALQSAIT---GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG-  335 (435)
Q Consensus       264 ~l~~~i~---~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g-  335 (435)
                      ++++.+.   +++.+|++.......|.+    +.+++|.++|++||+++|+||++.||-.      |.   .+.....| 
T Consensus       235 ~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~------g~---~ga~~~~gv  305 (474)
T PLN02482        235 AVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRI------AY---GGAQEYFGI  305 (474)
T ss_pred             HHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeec------Cc---chHhHHhCC
Confidence            8888886   357788888777777876    3478999999999999999999988732      11   11111122 


Q ss_pred             -ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        336 -VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       336 -vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                       .|+++++  |.+.+..++|.++. ++++.+......+.+.+++     ..+  +...++++.++|+.+..++..+++++
T Consensus       306 ~PDi~t~g--K~lggG~Pigav~g-~~ei~~~~~~~~~~~~~~T-----~~g--npl~~aAala~L~~l~~~~~~~~~~~  375 (474)
T PLN02482        306 TPDLTTLG--KVIGGGLPVGAYGG-RREIMEMVAPAGPMYQAGT-----LSG--NPLAMTAGIHTLKRLQQPGTYEYLDK  375 (474)
T ss_pred             CCCEEEec--chhhCCCceEEEEE-cHHHHHhhccCCCcccccC-----cch--hHHHHHHHHHHHHHHhccCHHHHHHH
Confidence             4777664  87655566788654 4555433111111122222     222  22334678889999988888899988


Q ss_pred             HHHHHHHHHHhc
Q psy10210        415 YHFNYKSCLQNL  426 (435)
Q Consensus       415 ~~~~~~~~~~~l  426 (435)
                      +.+.+++.++++
T Consensus       376 ~g~~l~~~L~~l  387 (474)
T PLN02482        376 ITKKLIQGILEA  387 (474)
T ss_pred             HHHHHHHHHHHH
Confidence            888888877654

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.53  E-value=2.6e-13  Score=132.95  Aligned_cols=202  Identities=23%  Similarity=0.231  Sum_probs=140.5

Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~  258 (435)
                      .++.+-|+   +..+.+++|..||..++.++.++||.        |++++..|.+.    .+....+|+++..++..   
T Consensus        71 ~~a~LEg~---~~~~afsSGmaAI~~~~l~ll~~GD~--------vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~---  136 (396)
T COG0626          71 ALAELEGG---EDAFAFSSGMAAISTALLALLKAGDH--------VLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG---  136 (396)
T ss_pred             HHHHhhCC---CcEEEecCcHHHHHHHHHHhcCCCCE--------EEecCCccchHHHHHHHHHHhcCeEEEEECCC---
Confidence            45555544   35789999999999999999988887        99999988884    44455678888887642   


Q ss_pred             cccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        259 TVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       259 ~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                        +.++.++++. ++|++|++..|+||+-.+.||++|+++|+++|+.++||..++..++         ..|++   .|+|
T Consensus       137 --~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~---------q~PL~---~GaD  202 (396)
T COG0626         137 --DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL---------QRPLE---LGAD  202 (396)
T ss_pred             --ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccc---------cChhh---cCCC
Confidence              4556666776 5999999999999999999999999999999999999999876443         12444   4899


Q ss_pred             EEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210        338 SISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY  415 (435)
Q Consensus       338 ~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~  415 (435)
                      +++-|..||+.|-..  .|+++.+++++.+..+.......|..          ..  .-.+|..++-+  ..+.-|+++.
T Consensus       203 IVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~----------l~--p~dA~l~lRGl--kTL~~Rm~~~  268 (396)
T COG0626         203 IVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAV----------LS--PFDAWLLLRGL--RTLALRMERH  268 (396)
T ss_pred             EEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCC----------CC--HHHHHHHHhcc--chHHHHHHHH
Confidence            999999999766543  25545556555443222111112221          00  12466665544  4555556555


Q ss_pred             HHHHHHHHHhc
Q psy10210        416 HFNYKSCLQNL  426 (435)
Q Consensus       416 ~~~~~~~~~~l  426 (435)
                      .+.+.+..+.|
T Consensus       269 ~~nA~~IA~~L  279 (396)
T COG0626         269 NENALKIAEFL  279 (396)
T ss_pred             HHHHHHHHHHH
Confidence            55555444433

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.52  E-value=8e-13  Score=133.85  Aligned_cols=251  Identities=14%  Similarity=0.019  Sum_probs=151.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+..+....     ........++.+.+++..+.+....++++++|+||+..|++.++....     
T Consensus        58 ~~~~i~~a~~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~-----  127 (425)
T PRK08088         58 LHPKVVAAVEAQLKKLSHTCFQ-----VLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATK-----  127 (425)
T ss_pred             CCHHHHHHHHHHHhhCCCcccc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhC-----
Confidence            5899999999998864322110     011233447777788877644334788999999999999999876532     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEE--------------EE--EecCCCc-cc--cHHHHHHHhh-----cCceEEEEe
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKV--------------KH--IRLTSSY-TV--DLAALQSAIT-----GNTVMLVGS  279 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v--------------~~--vp~~~~~-~~--d~~~l~~~i~-----~~~~~v~~~  279 (435)
                       ++.|+..+++|++....+...+...              ..  +|.+.++ ..  +++++++++.     ++.++|+++
T Consensus       128 -r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~E  206 (425)
T PRK08088        128 -RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIE  206 (425)
T ss_pred             -CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence             3457877999988765555543221              11  2222111 11  1556888775     356777777


Q ss_pred             CCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCc
Q psy10210        280 MPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGS  353 (435)
Q Consensus       280 ~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~  353 (435)
                      ......|.+    +.+++|.++|++||+++|+||+|+++...     |   ..+.+...+  +|+.  ++.|.+.+...+
T Consensus       207 pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~-----g---~~~~~~~~~~~pdi~--s~sK~l~~G~ri  276 (425)
T PRK08088        207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT-----G---TLFAMEQMGVAADLT--TFAKSIAGGFPL  276 (425)
T ss_pred             cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-----c---chhHHhhcCCCCCEE--EEeccccCCCcc
Confidence            655544555    45999999999999999999999975321     2   111111122  3544  456986555678


Q ss_pred             EEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        354 SVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       354 g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      |+++.+ +++.+..   .....+.     +..+  +....+++.++++.+..+.+.+++++..+.++..++.+
T Consensus       277 g~v~~~-~~~~~~~---~~~~~~~-----t~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l  338 (425)
T PRK08088        277 AGVTGR-AEVMDAI---APGGLGG-----TYAG--NPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAI  338 (425)
T ss_pred             eeeEec-HHHHhhc---CCCCCCC-----CCCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            996664 3443321   1111111     1222  22233456666777766777777777777776666544

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.51  E-value=5.9e-14  Score=133.81  Aligned_cols=193  Identities=19%  Similarity=0.240  Sum_probs=132.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      +.|++++++++.....   ..  +...+.+.    ++.+.++++||.+   ..+++.+||.|+.+++++...++..    
T Consensus         7 ~~~~m~~a~~~a~~gd---~~--Yg~D~~~~----~l~~~i~~l~g~e---~a~f~~sGT~An~~al~~~~~~~~~----   70 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGD---DA--YGEDPTTA----RLEERIAELFGKE---AALFVPSGTMANQLALRAHLRPGES----   70 (290)
T ss_dssp             S-HHEEHHHHHTTSB----CC--TTSSHHHH----HHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHHHHTTEE----
T ss_pred             CCHHHHHHHHccccCC---cc--cCCChhHH----HHHHHHHHHcCCC---EEEEeCCCChHHHHHHHHHHhcCCc----
Confidence            5666777764433211   11  22223333    4445677788775   4579999999999999999977766    


Q ss_pred             CCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCc-ccc---cC
Q psy10210        224 SLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPY-GTM---DD  290 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~npt-G~~---~~  290 (435)
                          |++.+++|..+...   ....|.+++.+|.+++|.+|++++++++.+      ++++|++++++|.. |++   ++
T Consensus        71 ----vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~e  146 (290)
T PF01212_consen   71 ----VICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEE  146 (290)
T ss_dssp             ----EEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHH
T ss_pred             ----eeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHH
Confidence                99999998875432   355799999999876699999999999965      57899999999964 655   78


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      +++|.++|++||+++|.|.+--.-.....   +.  .+-+. ..++|+++++++|.+++|.| ++ ++.++++.
T Consensus       147 l~ai~~~a~~~gl~lhmDGARl~~a~~~~---~~--~~~e~-~~~~D~v~~~~tK~~g~~~G-av-l~~~~~~i  212 (290)
T PF01212_consen  147 LRAISELAREHGLPLHMDGARLANAAAAL---GV--SLAEI-AAGADSVSFGGTKNGGAPGG-AV-LAGNKEFI  212 (290)
T ss_dssp             HHHHHHHHHHHT-EEEEEETTHHHHHCHH---HH--HHHHH-HTTSSEEEEETTSTT-SSSE-EE-EEESHHHH
T ss_pred             HHHHHHHHHhCceEEEEehhhHHHhhhcc---cc--cHHHH-hhhCCEEEEEEEcccccccc-eE-EEechHHH
Confidence            99999999999999999998532221100   10  01122 25689999999999766654 44 55656643

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.50  E-value=1.4e-12  Score=120.71  Aligned_cols=231  Identities=16%  Similarity=0.117  Sum_probs=162.0

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC-Cchh----HHHHHHH
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT-AHPA----FDKAANY  244 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~-~~~~----~~~~~~~  244 (435)
                      .+....+-..+-..++.+.|+.+. +++++.+.+--++-.+.+...+..      +..||+++. +++.    ....+..
T Consensus        71 ~~~W~~lp~~lgdklApLiGA~~~-Evvv~dtts~nl~k~L~aalr~~~------~r~vIv~E~~~fpTdly~a~g~~~~  143 (407)
T COG3844          71 KADWFDLPERLGDKLAPLIGARAG-EVVVTDTTSINLFKVLAAALRPQE------GRRVIVSEGDNFPTDLYIAEGLADL  143 (407)
T ss_pred             CCchhhchhHHHHHhhhhhcCCCC-ceEEeCCcchHHHHHHHHHhccCC------CceEEeecCCCCCcchhhhcchhhh
Confidence            345567777888899999999887 788888888777777777654332      223666664 4443    3344444


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .+..     .+-.+.+.+.++++++++++..|++++.+.-||..-++.+|.++++++|++++-|-|++.+.+        
T Consensus       144 ~~~~-----~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav--------  210 (407)
T COG3844         144 LGIG-----YDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV--------  210 (407)
T ss_pred             hccc-----ccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc--------
Confidence            4433     222345678899999999999999999999999999999999999999999999999987665        


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC--------C-----CCCccccCCCch
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN--------Y-----GSPSVSGSRSGG  391 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~--------~-----~~~~~~gsr~~~  391 (435)
                         |.+....|+|+-+.++|||+.+.+|.-..++-.++..+........|.|..        |     ...-..|+.+..
T Consensus       211 ---p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~  287 (407)
T COG3844         211 ---PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVL  287 (407)
T ss_pred             ---ceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchh
Confidence               788888999999999999988766654445555565555434445565532        1     011223455556


Q ss_pred             HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210        392 IIATCWAAMMYFGFEAQVWICVRYHFNYKSCL  423 (435)
Q Consensus       392 ~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~  423 (435)
                      .+++...+|..+..-++.+.-++........+
T Consensus       288 s~aal~~aLDifa~~~i~~lR~kSlaLTd~fi  319 (407)
T COG3844         288 SLAALEGALDIFADVDITELRKKSLALTDYFI  319 (407)
T ss_pred             hhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHH
Confidence            66777777877766665555555444444333

>KOG1368|consensus

Probab=99.49  E-value=1.1e-13  Score=126.33  Aligned_cols=208  Identities=19%  Similarity=0.205  Sum_probs=144.1

Q ss_pred             ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-Hhhh
Q psy10210        141 VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YARE  219 (435)
Q Consensus       141 ~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~  219 (435)
                      +.....++|++++++.-..   .-+  ..-|...++|.    .+|+++|-.   -++|+++||.++.+++++-+. ++. 
T Consensus        31 vT~PTdeMr~am~eA~vgD---dVy--GeD~tt~rLE~----~vA~l~GKE---AgLFv~SGTmgNllaIm~Hc~~rg~-   97 (384)
T KOG1368|consen   31 VTVPTDEMRRAMAEASVGD---DVY--GEDPTTNRLEQ----RVAELFGKE---AGLFVPSGTMGNLLAIMVHCHQRGS-   97 (384)
T ss_pred             ccCChHHHHHHHhhcccCc---ccc--cCCccHHHHHH----HHHHHhCcc---ceeeecccccccHHHHHHHhcCCCc-
Confidence            4445678888887654321   111  11245667666    456677654   468888899999999999876 444 


Q ss_pred             hcCCCCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhc--------CceEEEEeCCCCCcc-c
Q psy10210        220 EKGISLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITG--------NTVMLVGSMPNFPYG-T  287 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--------~~~~v~~~~p~nptG-~  287 (435)
                             +||+.+.+|--..+.   +...|+.++.+...+++.+|++++++++..        .|++|++.+-+|.+| .
T Consensus        98 -------eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~  170 (384)
T KOG1368|consen   98 -------EIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGK  170 (384)
T ss_pred             -------eEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCce
Confidence                   499999988774433   344588888888778999999999999962        379999999998888 5


Q ss_pred             c---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        288 M---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       288 ~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      +   +.++++.++|+++|+.+|.|.+--.-..   -..|.   |+.--..-.|++++..+|.+++|.|+  +++.++++.
T Consensus       171 vlPle~~~~v~~lak~~glkLH~DGARi~NAa---vasgV---~vk~i~~~fDSVsiCLSKglgAPVGS--ViVG~k~FI  242 (384)
T KOG1368|consen  171 VLPLEELDRVKALAKRHGLKLHMDGARIFNAA---VASGV---PVKKICSAFDSVSICLSKGLGAPVGS--VIVGSKDFI  242 (384)
T ss_pred             EeeHHHHHHHHHHHhccCCeeecchhhhhhHH---HHcCC---CHHHHHHhhhhhhhhhhccCCCCccc--EEEccHHHH
Confidence            5   6778889999999999999997421110   11122   11111123599999999998888863  578888887


Q ss_pred             cccccccCCCCC
Q psy10210        365 HCQYFVTSDWPG  376 (435)
Q Consensus       365 ~~~~~~~~~~~g  376 (435)
                      .....+....-|
T Consensus       243 ~kA~~~RKalGG  254 (384)
T KOG1368|consen  243 DKARHFRKALGG  254 (384)
T ss_pred             HHHHHHHHHhcC
Confidence            665444444333

>PLN02452 phosphoserine transaminase

Probab=99.49  E-value=7.5e-13  Score=130.44  Aligned_cols=231  Identities=10%  Similarity=0.005  Sum_probs=154.9

Q ss_pred             CCcChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHH
Q psy10210        167 PDIFPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAAN  243 (435)
Q Consensus       167 ~~~~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~  243 (435)
                      .+..+.+.++..++++.+.++++.+.+. .++++.|||.++.+++..+..++++        +++-...+.+  +.+.++
T Consensus        44 sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~--------~l~~~~G~fg~r~~~~a~  115 (365)
T PLN02452         44 SHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDK--------ADFVVTGSWSKKAAKEAK  115 (365)
T ss_pred             CCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCe--------EEEEECCHHHHHHHHHHH
Confidence            3557788899999999999999986543 4566689999999999998876655        6666666666  667777


Q ss_pred             HcCCEEEEEecCCC---ccccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210        244 YFGMKVKHIRLTSS---YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       244 ~~g~~v~~vp~~~~---~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~  319 (435)
                      .+|...+.......   ..+++++++  .+++...|.+++..+.||+. .+++++.+      +++++|++.+.+     
T Consensus       116 ~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g-----  182 (365)
T PLN02452        116 KYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFL-----  182 (365)
T ss_pred             HhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCcccc-----
Confidence            78864433322221   135666652  24567899999999999994 88877753      899999997543     


Q ss_pred             cccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC--CCCCccccCCCchHHHHHH
Q psy10210        320 SAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN--YGSPSVSGSRSGGIIATCW  397 (435)
Q Consensus       320 ~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~--~~~~~~~gsr~~~~ia~~~  397 (435)
                            +.++|+...++|.  .+.||. +||.|+|+++++++.+.+.. ...+.+..-.  ....+..++.+...+.++.
T Consensus       183 ------~~pidv~~~~v~~--~saqK~-lGP~Gl~~v~vr~~~l~~~~-~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~  252 (365)
T PLN02452        183 ------SKPVDVSKYGVIY--AGAQKN-VGPSGVTIVIIRKDLIGNAR-PITPGMLDYKIHAENDSLYNTPPCFGIYMCG  252 (365)
T ss_pred             ------CcccCHHHcCEEE--Eecccc-cCCCCeEEEEEcHHHHhhcc-cCCCchhhHHHHHhcCCccCChhHHHHHHHH
Confidence                  3478888878755  599998 48999999888876553321 1111111000  0111233566667777777


Q ss_pred             HHHHHhcHH-HHHHHHHHHHHHHHHHHHhcCC
Q psy10210        398 AAMMYFGFE-AQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       398 a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ++++.+..+ |+..+.++..+.++.+++.+.+
T Consensus       253 ~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~  284 (365)
T PLN02452        253 LVFEDLLAQGGLKAMEKRNIRKADLLYDAIDE  284 (365)
T ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence            888877554 5666665555555555555443

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.48  E-value=1.3e-12  Score=132.50  Aligned_cols=258  Identities=13%  Similarity=0.080  Sum_probs=157.4

Q ss_pred             ChHhHHH--HHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh--
Q psy10210        144 YQQDLVD--LLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE--  219 (435)
Q Consensus       144 g~~~l~~--~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~--  219 (435)
                      ++|++.+  ++.+.+.+..+..+..   .....+...++.+.++++.+.+..+.++++++|+||++.|++.++.+...  
T Consensus        62 ~~p~v~~~~ai~~ql~~l~~~~~~~---~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~  138 (443)
T PRK08297         62 NHPALADDPEFRAELGRAALNKPSN---SDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKN  138 (443)
T ss_pred             CChHHhhHHHHHHHHHHhhhhcccc---CCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccc
Confidence            4899999  9998887643211111   01123455566667777763222248999999999999999999876432  


Q ss_pred             -hcCC---CCCeEEEeCCCchhHHHHHHHc-CCEE-----------EEEecCC-C----c-c---------ccHHHHHHH
Q psy10210        220 -EKGI---SLPEIVLPTTAHPAFDKAANYF-GMKV-----------KHIRLTS-S----Y-T---------VDLAALQSA  268 (435)
Q Consensus       220 -~~g~---~~~~viv~~~~~~~~~~~~~~~-g~~v-----------~~vp~~~-~----~-~---------~d~~~l~~~  268 (435)
                       .+|.   .+.+|+....+|++....+... |...           ..+|... .    . .         -+++++++.
T Consensus       139 ~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (443)
T PRK08297        139 EARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAA  218 (443)
T ss_pred             cccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHH
Confidence             1343   2567998888888855444332 2110           0111110 0    0 0         134556666


Q ss_pred             hh---cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEE
Q psy10210        269 IT---GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSI  339 (435)
Q Consensus       269 i~---~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~  339 (435)
                      +.   +++.+|+++......|.+    +.+++|.++|++||+++|.||++.||-.     .|   ..+.+...|  .|++
T Consensus       219 i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~a~~~~gv~PDiv  290 (443)
T PRK08297        219 FERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL-----TG---TAWAYQQLGVRPDIV  290 (443)
T ss_pred             HHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc-----cc---hHHHHHhcCCCCCEE
Confidence            75   468889888777767776    7899999999999999999999998733     12   122222222  4888


Q ss_pred             EecCCCCCCccCCcEEEEEeCCcccccc--ccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210        340 SVDTHKYGFTPKGSSVVLYRDLKYKHCQ--YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF  417 (435)
Q Consensus       340 ~~s~hK~~~~p~g~g~il~~~~~~~~~~--~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~  417 (435)
                      +++  |.+  |  .|.++.+++ +....  ........+++|     .+  +....+++.++++.+.++++.++++++.+
T Consensus       291 ~~g--K~l--~--~~a~l~~~~-i~~~~~~~~~~~~~~~~T~-----~g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~  356 (443)
T PRK08297        291 AFG--KKT--Q--VCGIMAGRR-VDEVEDNVFAVSSRINSTW-----GG--NLVDMVRARRILEVIEEDGLVENAARQGE  356 (443)
T ss_pred             Eec--ccc--c--ccceecchH-HHHhhhhhccCccccCCCC-----Cc--cHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            765  763  3  334355543 11100  000011122222     22  22334678888999988899999999999


Q ss_pred             HHHHHHHhc
Q psy10210        418 NYKSCLQNL  426 (435)
Q Consensus       418 ~~~~~~~~l  426 (435)
                      .+.+.++++
T Consensus       357 ~l~~~L~~l  365 (443)
T PRK08297        357 YLLARLEEL  365 (443)
T ss_pred             HHHHHHHHH
Confidence            888877764

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.48  E-value=1.7e-12  Score=130.96  Aligned_cols=265  Identities=12%  Similarity=-0.043  Sum_probs=161.3

Q ss_pred             CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...+++.   -+++|++.+++.+++.+..   ..     ....+.+.++.+.++++++... +.+.++++|+
T Consensus        50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~-----~~~~~~~~~la~~L~~~~~~~~-~~v~f~~SGs  120 (433)
T PRK00615         50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SY-----GLTSEQEILFAEELFSYLGLED-HKIRFVSSGT  120 (433)
T ss_pred             CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CC-----CCCCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence            344555444333332   2358999999999987632   11     1123456677788888875432 4899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH---HHHc-CCE---EEEE---e-cCCC----ccccHHHHHHH
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA---ANYF-GMK---VKHI---R-LTSS----YTVDLAALQSA  268 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~---~~~~-g~~---v~~v---p-~~~~----~~~d~~~l~~~  268 (435)
                      ||+..|++.++....      +++|+....+|++....   +... +-.   ....   + ....    ..-|++++++.
T Consensus       121 EA~e~AiklAr~~tg------r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~  194 (433)
T PRK00615        121 EATMTAVRLARGITG------RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTV  194 (433)
T ss_pred             HHHHHHHHHHHHhhC------CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHH
Confidence            999999999886532      35688888888875311   1111 100   0000   0 0000    01267888888


Q ss_pred             hh---cCceEEEEeCCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEE
Q psy10210        269 IT---GNTVMLVGSMPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSI  339 (435)
Q Consensus       269 i~---~~~~~v~~~~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~  339 (435)
                      +.   +++.+|++.......|.+.    .+++|.++|++||+++|+||++.|| ..     |.   .+.....  ..|++
T Consensus       195 l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~-----G~---~ga~~~~gv~PDi~  265 (433)
T PRK00615        195 MNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RV-----AQ---GGAAAIYHVKPDIT  265 (433)
T ss_pred             HHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cc-----cH---hHHHHhcCCCCCeE
Confidence            75   3567888887777678763    3679999999999999999999877 21     11   1111112  24777


Q ss_pred             EecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy10210        340 SVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNY  419 (435)
Q Consensus       340 ~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~  419 (435)
                      ++  .|.+.+...+|+++.++ ++.+........+.++++     .+  +...++++.++++.+.++++.+++++..+.+
T Consensus       266 ~~--gK~lggG~p~~av~~~~-~i~~~~~~~~~~~~~~T~-----~g--~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l  335 (433)
T PRK00615        266 VY--GKILGGGLPAAAVVAHK-SIMDHLAPEGTIFQAGTL-----SG--NPLAMAAGKASINLCREQGFYTQLSTLEQNF  335 (433)
T ss_pred             EE--cccccCCcceeeeeecH-HHHhhhcCCCCcccCCCC-----cc--cHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            65  48754444567756554 443321110111222222     22  3334578889999998888888988888888


Q ss_pred             HHHHHh
Q psy10210        420 KSCLQN  425 (435)
Q Consensus       420 ~~~~~~  425 (435)
                      ++.+++
T Consensus       336 ~~~l~~  341 (433)
T PRK00615        336 LSPIEE  341 (433)
T ss_pred             HHHHHH
Confidence            666654

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.47  E-value=5.2e-12  Score=127.66  Aligned_cols=260  Identities=14%  Similarity=0.039  Sum_probs=159.1

Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      +++|++.+++.+.+.+.......     ....+...++.+.++++++.+- +.+.++++|+||+..|++..+..... +|
T Consensus        61 h~~p~v~~ai~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~~~-~~  133 (427)
T TIGR00508        61 YNHPRLNAAAQKQIDKMSHVMFG-----GFTHKPAIELCQKLVKMTPNAL-DCVFLADSGSVAVEVALKMALQYWQA-KG  133 (427)
T ss_pred             CCCHHHHHHHHHHHHhcCCcccc-----ccCCHHHHHHHHHHHhhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHh-hC
Confidence            45899999999998874322110     1112345667777888774332 48999999999999999998876533 33


Q ss_pred             C-CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCC-c-----cccHHHHHHHhh---cCceEEEE
Q psy10210        223 I-SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSS-Y-----TVDLAALQSAIT---GNTVMLVG  278 (435)
Q Consensus       223 ~-~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~-~-----~~d~~~l~~~i~---~~~~~v~~  278 (435)
                      . .+.+|+....+|++....+... +-             ....+|.... +     .-|++++++.+.   +++++|++
T Consensus       134 ~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaaviv  213 (427)
T TIGR00508       134 EKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVIL  213 (427)
T ss_pred             CCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEE
Confidence            3 2467888888888754333222 21             1112222110 1     115677777775   35677777


Q ss_pred             eCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCcc-
Q psy10210        279 SMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTP-  350 (435)
Q Consensus       279 ~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p-  350 (435)
                      +.. +...|.+    +++++|.++|++||+++|+||++.|+..     .|.   .+.....  ..|++++  .|.+.+. 
T Consensus       214 EPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr-----~G~---~~~~~~~~v~pDi~~~--gK~l~gG~  283 (427)
T TIGR00508       214 EPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGR-----TGK---LFACEHAGVVPDILCV--GKALTGGY  283 (427)
T ss_pred             echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----CCc---cchhhhcCCCCCEEEe--chhhhcCc
Confidence            764 5544543    7899999999999999999999977522     221   2222222  3477775  5875444 


Q ss_pred             CCcEEEEEeCCccccccccc-cCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        351 KGSSVVLYRDLKYKHCQYFV-TSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       351 ~g~g~il~~~~~~~~~~~~~-~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ..++.++.++ ++.+..... ...+ .+     .|..+  +...++++.++++.+..+++.+++++..+++++.++++.
T Consensus       284 ~p~~a~~~~~-~~~~~~~~~~~~~~~~~-----~T~~g--~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~  354 (427)
T TIGR00508       284 MTLSATVTTD-KVAQTISSGEAGCFMHG-----PTFMG--NPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR  354 (427)
T ss_pred             ccceEEEEcH-HHHHHHhcCCCCccccC-----CCCCc--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence            3567755554 333221000 0111 12     22222  234456888899988887888999988888888777654

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.46  E-value=2e-12  Score=130.96  Aligned_cols=244  Identities=13%  Similarity=0.037  Sum_probs=154.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|.+.+++.+++.+..  ...      ...+.+.++.+++++++.. . +.++++++|+||+..+++.++....     
T Consensus        67 ~~p~i~~a~~~~~~~~~--~~~------~~~~~~~~la~~L~~~~~~-~-~~v~~~~sGseA~e~Aik~a~~~~g-----  131 (426)
T PRK00062         67 AHPEVVEAVIEAAEKGL--SFG------APTELEVELAELVIELVPS-I-EMVRMVNSGTEATMSAIRLARGYTG-----  131 (426)
T ss_pred             CCHHHHHHHHHHHHhCC--cCC------CCCHHHHHHHHHHHHhCCC-C-CEEEEecCHHHHHHHHHHHHHHHhC-----
Confidence            58999999999987621  111      1235556788888887632 2 3799999999999999999886622     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CC------------EEE-----EEecCCCccccHHHHHHHhh---cCceEEEEeCCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GM------------KVK-----HIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPN  282 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~------------~v~-----~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~  282 (435)
                       +++|+..+++|++....+... |.            ..+     .+++.   .-|++++++.+.   +++++|+++...
T Consensus       132 -~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~i~~~~~~~aaiivEpv~  207 (426)
T PRK00062        132 -RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP---YNDLEAVEELFEEYGDEIAAVIVEPVA  207 (426)
T ss_pred             -CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC---CCCHHHHHHHHHhCCCcEEEEEEeCCc
Confidence             346999999999976443332 10            000     01111   137888888885   367888888666


Q ss_pred             CCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEE
Q psy10210        283 FPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVV  356 (435)
Q Consensus       283 nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~i  356 (435)
                      ..+|.+.+    +++|.++|++||+++|+||+|.|+..      |.   .+.....+  .|++  ++.|.+.+...+|++
T Consensus       208 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~------g~---~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~  276 (426)
T PRK00062        208 GNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV------AL---GGAQGYYGVTPDLT--TLGKIIGGGLPVGAF  276 (426)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc------CC---ccHHHHhCCCcchH--hhhhHhhCCCcceee
Confidence            66888855    99999999999999999999987722      10   01111112  3544  445875444446775


Q ss_pred             EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        357 LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       357 l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      +. ++++.+........+.+.     +..+  +....+++.++++.+..+.+.+++++..+.+++.+++
T Consensus       277 ~~-~~~i~~~~~~~~~~~~~~-----T~~~--~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~  337 (426)
T PRK00062        277 GG-RREIMEQLAPLGPVYQAG-----TLSG--NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKE  337 (426)
T ss_pred             eE-HHHHHHhhccCCCceecc-----cCcC--CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence            55 445443311011112221     1222  2223467788888887777888888888877776654

>PRK06149 hypothetical protein; Provisional

Probab=99.46  E-value=4.5e-12  Score=140.08  Aligned_cols=251  Identities=14%  Similarity=0.024  Sum_probs=158.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+......       ...+...++.+.+++++.... +.++++++|+||+..|++.++....     
T Consensus       600 ~hp~v~~Ai~~q~~~l~~~~~-------~~~~~~~elae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tg-----  666 (972)
T PRK06149        600 GHPRLAAAAARQWSLLNTNSR-------FHYAAVAEFSERLAALAPDGL-DTVFLVNSGSEANDLAIRLAWAASG-----  666 (972)
T ss_pred             CCHHHHHHHHHHHHhcccccc-------ccCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHhcC-----
Confidence            489999999998876422111       123556677788888874222 3799999999999999998876532     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-C-----C--------EEEEEecCCCcc-----cc-----HHHHHHHhh------cCc
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-G-----M--------KVKHIRLTSSYT-----VD-----LAALQSAIT------GNT  273 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g-----~--------~v~~vp~~~~~~-----~d-----~~~l~~~i~------~~~  273 (435)
                       +++||..+.+|++....+... +     .        .+..++....+.     .+     .+++++.+.      +++
T Consensus       667 -r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i  745 (972)
T PRK06149        667 -RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGL  745 (972)
T ss_pred             -CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence             346888888888644332111 1     0        123333221111     11     233333332      357


Q ss_pred             eEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCC
Q psy10210        274 VMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYG  347 (435)
Q Consensus       274 ~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~  347 (435)
                      .+|++.......|.+.+    ++++.++|++||+++|+||++.||-.     .|.  ..+.+...|  .|+++++  |.+
T Consensus       746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGR-----tG~--~~~a~e~~gv~PDivt~g--K~l  816 (972)
T PRK06149        746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGR-----LGH--YFWGFEQQGVVPDIITMA--KGM  816 (972)
T ss_pred             EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCc-----cCc--cchhhhhcCCCCCEEEec--ccc
Confidence            78888877776787744    99999999999999999999988732     221  012333334  4888775  875


Q ss_pred             CccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        348 FTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       348 ~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .+...+|+++.++ ++.+...  ...+.++++     .|  +..+.+++.++++.+.++++.+++++..+++++.++++.
T Consensus       817 g~G~Pl~av~~~~-~i~~~~~--~~~~~~sT~-----~g--nP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~  886 (972)
T PRK06149        817 GNGHPLGAVITRR-EIAEALE--AEGYFFSST-----GG--SPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALA  886 (972)
T ss_pred             cCCeeeEEEEEcH-HHHhhhc--cCCcccCCC-----CC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            5556678877665 4432210  011111211     12  233446888999999999999999998888888887653

>PRK06148 hypothetical protein; Provisional

Probab=99.45  E-value=3.7e-12  Score=140.86  Aligned_cols=250  Identities=12%  Similarity=0.032  Sum_probs=162.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.. .+.      ....+.+.++.+.+++++..+- +.+.++++||||+..|++.++....     
T Consensus       639 ~hp~v~~Ai~~q~~~l~-~~~------~~~~~~~~~lAe~L~~~~p~~~-~~v~f~nSGsEA~e~AlklAr~~tG-----  705 (1013)
T PRK06148        639 AHPRVVAAAARQAARLN-TNT------RYLHDAIVAYAERLTATLPDGL-TVAFFVNSGSEANSLALRLARAHTG-----  705 (1013)
T ss_pred             CCHHHHHHHHHHHhhcC-CcC------CcCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHhcC-----
Confidence            48999999999988631 111      1234566778888888874322 4789999999999999999986532     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCC----cc-cc-------HHHHHHHhh------cC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSS----YT-VD-------LAALQSAIT------GN  272 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~----~~-~d-------~~~l~~~i~------~~  272 (435)
                       +++||....+|++....+... +            -.+..++....    +. .+       .+.+++.+.      ++
T Consensus       706 -r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~  784 (1013)
T PRK06148        706 -QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRG  784 (1013)
T ss_pred             -CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCc
Confidence             346888888888854332211 1            01222221110    11 01       134555443      35


Q ss_pred             ceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~  346 (435)
                      +.+|++.......|.+    +.++++.++|++||+++|.||++.||-.     .|.  ..+.+...|+  |+++++  |.
T Consensus       785 iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGR-----tG~--~~~a~e~~gv~PDivt~g--K~  855 (1013)
T PRK06148        785 PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGR-----VGS--HWWAFETQGVVPDIVTMG--KP  855 (1013)
T ss_pred             eEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCC-----CCC--cchhhhhcCCCcceeeec--cc
Confidence            7888888777666766    4599999999999999999999998732     121  0233333444  888775  87


Q ss_pred             CCccCCcEEEEEeCCccccccccccCC-CCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        347 GFTPKGSSVVLYRDLKYKHCQYFVTSD-WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       347 ~~~p~g~g~il~~~~~~~~~~~~~~~~-~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      +.+...+|+++.+ +++.+..   .+. ..+++|+..+       .+.+++.++++.+.++++.+++++..+++++.+++
T Consensus       856 lggG~Plgav~~~-~ei~~~~---~~g~~~~~Tf~gnp-------la~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~  924 (1013)
T PRK06148        856 IGNGHPMGAVVTT-REIADSF---DNGMEYFNTFGGNP-------VSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRE  924 (1013)
T ss_pred             ccCCcceEEEEEc-HHHHhhc---cCCCccccCCCCCH-------HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence            6666778887766 4443321   111 1223333222       23478889999999999999999999998888876


Q ss_pred             cC
Q psy10210        426 LS  427 (435)
Q Consensus       426 l~  427 (435)
                      +.
T Consensus       925 l~  926 (1013)
T PRK06148        925 LQ  926 (1013)
T ss_pred             HH
Confidence            53

>KOG1404|consensus

Probab=99.44  E-value=1.7e-12  Score=123.04  Aligned_cols=261  Identities=15%  Similarity=0.045  Sum_probs=168.6

Q ss_pred             CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      |.+.-..-+++|++.+++.+...+.+.+.      +-...+-..++.+.+++++-.+-. .++++++|+||++++++.++
T Consensus        58 Gi~tvslGHchP~v~~a~~kQl~~l~H~t------~~~~~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGsEANelal~mar  130 (442)
T KOG1404|consen   58 GIVTVSLGHCHPDVVAAAVKQLKKLYHTT------SGYLNPPIHDLAEALVSKLPGDLK-VVFFVNSGSEANELALKMAR  130 (442)
T ss_pred             CeEEEEcCCCChHHHHHHHHhhhhhEEee------ccccCCcHHHHHHHHHHhCCCCce-EEEEecCCchHHHHHHHHHH
Confidence            33334444569999999999887644332      111223344556667777754443 68999999999999999998


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHH-HHHHHcCCEEEEEecC-----------CC-------cc-----c--cHHHHHHH
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFD-KAANYFGMKVKHIRLT-----------SS-------YT-----V--DLAALQSA  268 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~-~~~~~~g~~v~~vp~~-----------~~-------~~-----~--d~~~l~~~  268 (435)
                      .+...      -+||.-..+|++.. -++...|.....-+.+           ++       +.     .  -.+++++.
T Consensus       131 ~Yt~~------~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~  204 (442)
T KOG1404|consen  131 LYTGN------LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDL  204 (442)
T ss_pred             HhcCC------ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHH
Confidence            87654      24777777776643 3333334433322211           00       00     0  01334444


Q ss_pred             hh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cE
Q psy10210        269 IT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TS  338 (435)
Q Consensus       269 i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~  338 (435)
                      +.    +...+.+....+.--|++    ..+++..++|+++|..+|.||++.||..     .|   .-|.|...++  |+
T Consensus       205 i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGR-----tG---~~wgfe~h~v~PDI  276 (442)
T KOG1404|consen  205 ILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGR-----TG---HMWGFESHGVVPDI  276 (442)
T ss_pred             HHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccc-----cc---ccccccccCCCccH
Confidence            42    235667777777766777    4599999999999999999999999843     23   3567777776  66


Q ss_pred             EEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q psy10210        339 ISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFN  418 (435)
Q Consensus       339 ~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~  418 (435)
                      +++.  |.+++....|.+++. +++.+-...  .....-+|+..++++       +++.++++.+.+|.++++.+....+
T Consensus       277 vTmA--KgiGnG~Pl~AVvtt-~EIa~v~~~--~~~~fnTyggnP~a~-------avg~aVL~Vikee~LqE~aa~vG~y  344 (442)
T KOG1404|consen  277 VTMA--KGIGNGFPLGAVVTT-PEIADVLNQ--KSSHFNTYGGNPVAC-------AVGLAVLKVIKEENLQENAAEVGSY  344 (442)
T ss_pred             HHHH--hhccCCCcceeeecC-HHHHHHHHh--ccccccccCCCchhH-------HHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            6554  876666778886665 454432111  111233344444444       6788999999999999999999999


Q ss_pred             HHHHHHhcCC
Q psy10210        419 YKSCLQNLSD  428 (435)
Q Consensus       419 ~~~~~~~l~~  428 (435)
                      +++.+.++.+
T Consensus       345 l~~~l~~l~d  354 (442)
T KOG1404|consen  345 LLEKLAALKD  354 (442)
T ss_pred             HHHHHHHHhh
Confidence            8888877654

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.44  E-value=1.5e-11  Score=124.63  Aligned_cols=271  Identities=11%  Similarity=-0.043  Sum_probs=158.3

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHH-HHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEV-FGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      ++..|.+...+.++.   +++|++.+++.+. ...... +... ...+...++.+.+.+.+++++..+- +.++++++|+
T Consensus        56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~-~~~~-~~~~~~~~la~~l~~~l~~~~p~~~-~~v~f~~SGs  132 (464)
T TIGR00699        56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLI-NRPA-LGNFPSKDWAKILKEGILKVAPKGQ-DQVWTGMSGS  132 (464)
T ss_pred             CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhc-cccc-CCcHHHHHHHHHHHHhHHhhCCCCc-CEEEEeCCcH
Confidence            344454443333333   3489999999984 232111 1111 1122334455555555566664222 4899999999


Q ss_pred             HHHHHHHHHHHHHhhhh-cC--------------------CCCCeEEEeCCCchhHHHHHHHc-CC-----------EEE
Q psy10210        204 ESIMMACKAYRDYAREE-KG--------------------ISLPEIVLPTTAHPAFDKAANYF-GM-----------KVK  250 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~-~g--------------------~~~~~viv~~~~~~~~~~~~~~~-g~-----------~v~  250 (435)
                      ||++.|++.++.....+ ++                    -++.+||....+|++....+... +-           ...
T Consensus       133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~  212 (464)
T TIGR00699       133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWP  212 (464)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCce
Confidence            99999999998753221 11                    12347999998888854443322 21           112


Q ss_pred             EEecCC-C---c----------cccHHHHHHHhh---cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEec
Q psy10210        251 HIRLTS-S---Y----------TVDLAALQSAIT---GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDC  309 (435)
Q Consensus       251 ~vp~~~-~---~----------~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~  309 (435)
                      .+|... .   .          .-+++++++++.   +++.+|+++......|.+.+    +++|.++|++||+++|+||
T Consensus       213 ~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE  292 (464)
T TIGR00699       213 QAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE  292 (464)
T ss_pred             ecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence            222211 0   0          013566777775   35788999888777787744    9999999999999999999


Q ss_pred             cccchhhhcccccCCCCCCCCCCCCC----ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccc
Q psy10210        310 CLGGFLAPFMSAAGYPLPPFDFSLPG----VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVS  385 (435)
Q Consensus       310 ~~~~~~~~~~~~~g~~~~~~d~~~~g----vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~  385 (435)
                      ++.||-.     .|   ..+.+...|    .|+++++  |.+.+   .|+ ++..+.+..    ..+...+++|+...  
T Consensus       293 V~tGfGr-----tG---~~fa~e~~gv~~~PDi~t~g--K~lg~---gG~-~~~~~~~~~----~~~~~~~~T~~gnp--  352 (464)
T TIGR00699       293 VQTGVGA-----TG---KFWAHEHWNLDDPPDMVTFS--KKFQT---AGY-FFHDPAFRP----NKPYRQFNTWMGDP--  352 (464)
T ss_pred             eeeCCCC-----Cc---chhHHHhcCCCCCCCEEEeh--hhhcc---CCc-cccchhccC----CCCcccccCCCCCH--
Confidence            9988733     12   122222222    5787765  76421   122 223222110    01222333332222  


Q ss_pred             cCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        386 GSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       386 gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                           .+.+++.++++.+.++++.+++++..+++++.++++
T Consensus       353 -----~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l  388 (464)
T TIGR00699       353 -----SRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDL  388 (464)
T ss_pred             -----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence                 234678889999988999999988888887777654

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK07046 aminotransferase; Validated

Probab=99.43  E-value=9.3e-12  Score=126.48  Aligned_cols=264  Identities=14%  Similarity=0.025  Sum_probs=164.5

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...++++.   +++|++.+++.+++.+-...        ....+.+.++.+.++++++.   +.+.++++|||
T Consensus        73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~--------~~~~~~~~~lAe~l~~~~~~---~~v~F~nSGtE  141 (453)
T PRK07046         73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT--------MLPSEDAAWVGEELARRFGL---PYWQVATTATD  141 (453)
T ss_pred             CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC--------CCCCHHHHHHHHHHHHHhCC---CEEEEECCHHH
Confidence            445554433333222   23899999999998863211        12346778888888888842   47999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH--c-----------CC------EEEEEecCCCccccHHHH
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY--F-----------GM------KVKHIRLTSSYTVDLAAL  265 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~--~-----------g~------~v~~vp~~~~~~~d~~~l  265 (435)
                      |++.|++.+|....      +++|+....+|+++......  .           |.      .+..+|    + -|++++
T Consensus       142 A~e~AlrlAR~~TG------r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l  210 (453)
T PRK07046        142 ANRFVLRWARAVTG------RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAAL  210 (453)
T ss_pred             HHHHHHHHHHHhhC------CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHH
Confidence            99999999986632      45688888888885322211  0           10      011111    1 278999


Q ss_pred             HHHhh-cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        266 QSAIT-GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       266 ~~~i~-~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      ++.+. +++.+|+++......|.+    +.++++.++|++||+++|.||++. |-.      |.+.....+ .-..|+++
T Consensus       211 ~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~------g~Gg~~~~~-gv~PDi~t  282 (453)
T PRK07046        211 EAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISS------GPGGYTRAH-GLEPDFLV  282 (453)
T ss_pred             HHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-Ccc------CCcchhHHh-CCCcccee
Confidence            98885 467888888777666766    458999999999999999999986 322      111111111 11248877


Q ss_pred             ecCCCCCCccCCcEEEEEeCCccccccccccC-CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy10210        341 VDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS-DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNY  419 (435)
Q Consensus       341 ~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~-~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~  419 (435)
                      ++  |.+.+..++|+++.++ ++.+....... ...+....+.|..+  +...++++.++++.+.++++.+++++..+.+
T Consensus       283 ~g--K~lggG~Pi~av~g~~-~i~~~~~~~~~~~~~~~~~~~~T~~g--npl~~aa~~a~L~~l~~~~~~~~~~~~g~~l  357 (453)
T PRK07046        283 VG--KPIAGGVPCAVYGFSA-ELAERAQAAKASAPPGHSGIGTTLSA--NALAMAAMRATLAEVMTEAAYAHMLALAARL  357 (453)
T ss_pred             eh--hhhcCCCcceeeeehH-HHHHHHhhccccCCCCCceeCCCCcc--cHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            64  8765567788866554 44332100000 00111001112222  3334578889999888778888888888888


Q ss_pred             HHHHHhc
Q psy10210        420 KSCLQNL  426 (435)
Q Consensus       420 ~~~~~~l  426 (435)
                      .+.++.+
T Consensus       358 ~~~L~~l  364 (453)
T PRK07046        358 AAGLRAV  364 (453)
T ss_pred             HHHHHHH
Confidence            7777653

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.43  E-value=6.9e-12  Score=126.25  Aligned_cols=170  Identities=16%  Similarity=0.163  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ....|..+..|+.||.+..  -++++|.|.|+..++.+.+.+||.        |+++.++|-+........|+..+++..
T Consensus        70 G~i~eAqe~aA~~fgAd~t--yFvvNGTS~ank~vi~a~~~~GD~--------VLvdRN~HKSi~~glilaGa~Pvyl~p  139 (557)
T COG1982          70 GPIKEAQELAARVFGADHT--YFVVNGTSTANKAVINAVLTPGDK--------VLVDRNCHKSIHHGLILAGATPVYLEP  139 (557)
T ss_pred             ccHHHHHHHHHHHhCCCce--EEEECCccHHHHHHHHhhcCCCCE--------EEecCCccHHHHHHHHHcCCceEEecC
Confidence            3456677789999998764  688899999999999999999988        999999999999999999999999865


Q ss_pred             C--C----CccccHHHHHHHhhc--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        255 T--S----SYTVDLAALQSAITG--NT-VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       255 ~--~----~~~~d~~~l~~~i~~--~~-~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      .  +    -+.++.+.+++++.+  .. +++++++|+. .|++-++++|.+.++++++|+.+|++++...-.+      +
T Consensus       140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~------~  212 (557)
T COG1982         140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFS------P  212 (557)
T ss_pred             CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCccccccc------c
Confidence            4  2    246899999988754  34 7899999988 8999999999999999999999999987543211      0


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      ..+-.-...+.|+.+.|+||.+.+-..+|.+.+++.
T Consensus       213 ~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~  248 (557)
T COG1982         213 MLPESALNGGADFVTQSTHKLLAALSQASMIHVKDG  248 (557)
T ss_pred             cCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCC
Confidence            111222235789999999999877788899888873

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.42  E-value=1.6e-11  Score=120.02  Aligned_cols=232  Identities=11%  Similarity=-0.067  Sum_probs=154.7

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCce-EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEE-EeCCCchh--HHHHHH
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCG-CMTSGGTESIMMACKAYRDYAREEKGISLPEIV-LPTTAHPA--FDKAAN  243 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~-~~t~ggteai~~a~~a~~~~~~~~~g~~~~~vi-v~~~~~~~--~~~~~~  243 (435)
                      +.++.+.++..++.+.+.++++.+.+.++ ++++|||.++.+++..+..++++        ++ +....+.+  +.+.++
T Consensus        42 HRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~--------~~~~~~tG~fg~r~~~ea~  113 (364)
T PRK12462         42 HRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAA--------APEYVTTGYWSRKAIGEAS  113 (364)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCc--------EEEEEeCCHHHHHHHHHHH
Confidence            45678889999999999999999765455 55566999999999999876664        44 44455555  556666


Q ss_pred             HcCCEEEEEecC----CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210        244 YFGMKVKHIRLT----SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       244 ~~g~~v~~vp~~----~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~  319 (435)
                      .+| ++..+...    .+..++++++  .++++...|.+++-.+.+|+.-+     ++.+.+++++++|.+.+-+.    
T Consensus       114 ~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s----  181 (364)
T PRK12462        114 RVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMS----  181 (364)
T ss_pred             hcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhC----
Confidence            666 55544321    1233455554  23456788999999999999854     33334689999999865432    


Q ss_pred             cccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-C-CCCCccccCCCchHHHHHH
Q psy10210        320 SAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-N-YGSPSVSGSRSGGIIATCW  397 (435)
Q Consensus       320 ~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-~-~~~~~~~gsr~~~~ia~~~  397 (435)
                             .|+|+...  |++..+.+|.+ ||.|+++++++++.+.+... ..|.+..- . ....+...+.+...+-++-
T Consensus       182 -------~pid~~~~--dvi~agsQKnl-gP~Gltvvivs~~al~~~~~-~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~  250 (364)
T PRK12462        182 -------RPFDVEAY--GMVYAHAQKNL-GPAGVTVAIIRRALLERVPD-TLPPMLDFRTHVEHRSNYNTPPVFAIYVMA  250 (364)
T ss_pred             -------CCCChHHc--cEEEeeccccC-CCCceEEEEECHHHHhhccc-cCCchhhHHHHHhcCCCCCCchHHHHHHHH
Confidence                   36777654  99999999996 59999998888876543211 11221100 0 0011222355666666777


Q ss_pred             HHHHHhcHH--HHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        398 AAMMYFGFE--AQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       398 a~l~~~g~~--g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                      .+++.+.++  |+.+..+++.+.++.+.+.+.+..
T Consensus       251 ~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~  285 (364)
T PRK12462        251 LVLRWIRDEIGGVHAMRDINARKAAMLYATLDALN  285 (364)
T ss_pred             HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            777777666  777777777777777776666555

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.40  E-value=1.7e-11  Score=131.25  Aligned_cols=257  Identities=12%  Similarity=0.003  Sum_probs=155.7

Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-Hhhhhc
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEK  221 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~  221 (435)
                      +++|++.++++++..+..+....     ....+...++.+.++++.+.+.-..++++++|+||++.|++.++. .... +
T Consensus       382 h~~p~I~~Ai~~Qa~rl~hv~~~-----~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~-~  455 (817)
T PLN02974        382 TLQPELARAVAYAAGRYGHVMFP-----ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVD-H  455 (817)
T ss_pred             CCCHHHHHHHHHHHhhCCccccC-----ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHh-c
Confidence            35899999999999885443211     123455566777777754322124899999999999999999964 3222 3


Q ss_pred             CC-------------CCCeEEEeCCCchhHHHHHHHc-CC---------E-----EEEEecCC--------------Ccc
Q psy10210        222 GI-------------SLPEIVLPTTAHPAFDKAANYF-GM---------K-----VKHIRLTS--------------SYT  259 (435)
Q Consensus       222 g~-------------~~~~viv~~~~~~~~~~~~~~~-g~---------~-----v~~vp~~~--------------~~~  259 (435)
                      |.             .+.+||.-..+|++-...+... +.         .     ..+++...              .+.
T Consensus       456 G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~  535 (817)
T PLN02974        456 GFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFS  535 (817)
T ss_pred             CCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccc
Confidence            42             3667998888888833332222 21         0     01111000              000


Q ss_pred             ----------------------------ccHHHHHHHhh--------cCceEEEEeCC-CCCcccc----cCHHHHHHHH
Q psy10210        260 ----------------------------VDLAALQSAIT--------GNTVMLVGSMP-NFPYGTM----DDIGAIAKLG  298 (435)
Q Consensus       260 ----------------------------~d~~~l~~~i~--------~~~~~v~~~~p-~nptG~~----~~i~~i~~la  298 (435)
                                                  ...+.+++.+.        +++.+++++.. +...|.+    +.++++.++|
T Consensus       536 ~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc  615 (817)
T PLN02974        536 SGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC  615 (817)
T ss_pred             ccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence                                        00245666664        25677877774 5656766    5699999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccc---cC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFV---TS  372 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~---~~  372 (435)
                      ++||+++|.||++.||-.        ....+.....|+  |+++++  |.+.+. .++|+++.+++ +.+....-   ..
T Consensus       616 ~~~gilLI~DEV~TGfGR--------tG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~-I~~~f~~~~~~~~  684 (817)
T PLN02974        616 RSRKIPVIFDEVFTGLWR--------LGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEE-VFEAFRGPSKLDA  684 (817)
T ss_pred             HHhCCEEEEeecccCCCc--------ccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHH-HHHhhccccccCC
Confidence            999999999999999833        223445544555  888887  775555 46788777654 33221000   01


Q ss_pred             CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH----HHHHHHHHHHHHHHHHH
Q psy10210        373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE----AQVWICVRYHFNYKSCL  423 (435)
Q Consensus       373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~----g~~~~~~~~~~~~~~~~  423 (435)
                      -..|++|....+++       +++.++++.+.++    ++.++.+++.+.+.+.+
T Consensus       685 ~~hg~Ty~gnpl~c-------Aaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l  732 (817)
T PLN02974        685 LLHGHSYTAHPMGC-------AAAAKALQWYKDPSTNPNLIPPGSRLRELWDEEL  732 (817)
T ss_pred             cccCCCCCcCHHHH-------HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence            12444444444433       7888899998776    44455555555444444

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.40  E-value=1.3e-11  Score=124.95  Aligned_cols=258  Identities=12%  Similarity=0.057  Sum_probs=152.4

Q ss_pred             ChHhHH--HHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh--
Q psy10210        144 YQQDLV--DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE--  219 (435)
Q Consensus       144 g~~~l~--~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~--  219 (435)
                      ++|++.  +++.+++.+.....+...   ....+...++.+.++++.+.+.-+.++++++|+||++.|++.++....+  
T Consensus        55 ~~p~v~~~~ai~~q~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~  131 (431)
T TIGR03251        55 NHPALVDDLAFRARLGAAAVNKPSNS---DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHN  131 (431)
T ss_pred             CChhhhHHHHHHHHHHHhhhcccccC---CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcch
Confidence            489998  899888876422111111   0112333445556666653222247999999999999999999876421  


Q ss_pred             -hcCCC---CCeEEEeCCCchhHHHHHHHc-CCE-EE----------EEec-------CCCc--------cccHHHHHHH
Q psy10210        220 -EKGIS---LPEIVLPTTAHPAFDKAANYF-GMK-VK----------HIRL-------TSSY--------TVDLAALQSA  268 (435)
Q Consensus       220 -~~g~~---~~~viv~~~~~~~~~~~~~~~-g~~-v~----------~vp~-------~~~~--------~~d~~~l~~~  268 (435)
                       .+|.+   +.+|+....+|++....+... |.. ..          .++.       +...        .-+++++++.
T Consensus       132 ~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~  211 (431)
T TIGR03251       132 QARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAA  211 (431)
T ss_pred             hhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHH
Confidence             12432   467888888888855443322 211 00          0111       0000        0134555666


Q ss_pred             hh---cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEE
Q psy10210        269 IT---GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSI  339 (435)
Q Consensus       269 i~---~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~  339 (435)
                      +.   +++.+++++......|.+    +.+++|.++|++||+++|+||+++||-.     .|   ..+.+...  ..|++
T Consensus       212 ~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr-----tG---~~~a~~~~gv~PDi~  283 (431)
T TIGR03251       212 FAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGL-----TG---TAWAYQQLGVQPDIV  283 (431)
T ss_pred             HHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCc-----cc---hHHHHHhcCCCCCEE
Confidence            63   578999999887777876    6899999999999999999999998733     12   12222222  35888


Q ss_pred             EecCCCCCCccCCcEEEEEeCC--ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210        340 SVDTHKYGFTPKGSSVVLYRDL--KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF  417 (435)
Q Consensus       340 ~~s~hK~~~~p~g~g~il~~~~--~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~  417 (435)
                      +++  |..  | .+|+ +.+++  +.....+ ..+...++     |..|  +....+++.++++.+..+++.+++++..+
T Consensus       284 ~~g--K~~--~-~~g~-~~~~~i~~~~~~~~-~~~~~~~~-----T~~g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~  349 (431)
T TIGR03251       284 AFG--KKT--Q-VCGI-MAGRRVDEVADNVF-AVPSRLNS-----TWGG--NLVDMVRATRILEIIEEERLVDNARVQGA  349 (431)
T ss_pred             Eec--ccC--c-cceE-EecchHHHhhhhcc-cCccccCC-----CCCC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            875  552  3 2344 44443  1111000 00111122     2222  23345678889999888888888888888


Q ss_pred             HHHHHHHhc
Q psy10210        418 NYKSCLQNL  426 (435)
Q Consensus       418 ~~~~~~~~l  426 (435)
                      .+.+.++++
T Consensus       350 ~l~~~L~~l  358 (431)
T TIGR03251       350 HLLARLHEL  358 (431)
T ss_pred             HHHHHHHHH
Confidence            887777654

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>KOG2040|consensus

Probab=99.35  E-value=3.8e-11  Score=119.80  Aligned_cols=258  Identities=18%  Similarity=0.172  Sum_probs=178.5

Q ss_pred             HHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC-CCeEEEeCC
Q psy10210        156 FGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS-LPEIVLPTT  233 (435)
Q Consensus       156 ~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~-~~~viv~~~  233 (435)
                      +..+.+.+|+.|. -.++..++..++.+++|++.|.+.-  .+--++|.++-...+.++|.+... +|.. +...++|..
T Consensus       562 wp~fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D~~--s~QPNsGA~GEYaGL~~IRaY~~~-kge~hRnvClIPvS  638 (1001)
T KOG2040|consen  562 WPEFANIHPFAPVEQAQGYQQLFTELEKDLCEITGFDSF--SLQPNSGAQGEYAGLRVIRAYLES-KGEGHRNVCLIPVS  638 (1001)
T ss_pred             chhhccCCCCCchHHHhhHHHHHHHHHHHhheeecccce--eecCCCCcccchhhHHHHHHHHHh-ccCCcceeEEEeec
Confidence            4445555666663 3578999999999999999999743  233356677777777787777665 5654 455689999


Q ss_pred             CchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEec
Q psy10210        234 AHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDC  309 (435)
Q Consensus       234 ~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~  309 (435)
                      +|......|.+.|++++.|.++.+|.+|..+|++...+   +-.++.+++|++ .|+. +.++++.++.++||--+..|.
T Consensus       639 AHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDG  717 (1001)
T KOG2040|consen  639 AHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDG  717 (1001)
T ss_pred             ccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecC
Confidence            99999999999999999999999999999999887653   568999999988 8988 679999999999999999998


Q ss_pred             cccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-----CCcEEEEEeCCccccc---cccccCCCCCCCCCC
Q psy10210        310 CLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-----KGSSVVLYRDLKYKHC---QYFVTSDWPGGNYGS  381 (435)
Q Consensus       310 ~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-----~g~g~il~~~~~~~~~---~~~~~~~~~gg~~~~  381 (435)
                      +----      ..|    .....+.|.|+.-.+.||+++-|     +|.|-|.+++. +...   .-...+.-.++.-.-
T Consensus       718 ANMNA------qVG----lc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H-LapfLP~HpVvs~~~~~~~~~~  786 (1001)
T KOG2040|consen  718 ANMNA------QVG----LCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSPGRPEDTSPV  786 (1001)
T ss_pred             CCccc------eec----ccCCccccccceeecccceeeecCCCCCCCCCccchhhh-ccccCCCCCccCCCCCCCCCCc
Confidence            73211      112    12233457899999999985433     45565555543 2211   001111111221111


Q ss_pred             CccccCCCc--hHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        382 PSVSGSRSG--GIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       382 ~~~~gsr~~--~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .++..+.-|  ..+.-.|+.++.+|..|+.+..+-.+-++.+..++|+.
T Consensus       787 gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~  835 (1001)
T KOG2040|consen  787 GSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES  835 (1001)
T ss_pred             cceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh
Confidence            122222222  34457899999999999998877766666666655543

>KOG1360|consensus

Probab=99.35  E-value=5.3e-11  Score=112.90  Aligned_cols=254  Identities=13%  Similarity=0.013  Sum_probs=172.0

Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .++|++++++.+.++++..+-.... .-.+..+...++.+.+|++-+-+..   ++.++.--|++..+..+.+.      
T Consensus       185 s~Hp~V~~A~~~tl~~hG~GAGGTR-NIsG~s~~hv~LE~eLA~LHqK~aA---LlFsSCfVANDstLftLak~------  254 (570)
T KOG1360|consen  185 SRHPEVLDAMHDTLDRHGAGAGGTR-NISGHSKHHVRLEAELADLHQKEAA---LLFSSCFVANDSTLFTLAKK------  254 (570)
T ss_pred             cCChHHHHHHHHHHHHcCCCcCCcc-ccCCCCchhhhHHHHHHHHhcCcce---eeeeeeeeccchHHHHHHHH------
Confidence            3589999999999998755433222 2234445555666677777755432   44555566666666655322      


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                      .++.+|+..+..|.+.....+..++.-....-     -|+++|++++.+    .+++|.+...++.+|.+.|+++|.+++
T Consensus       255 lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-----ND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDva  329 (570)
T KOG1360|consen  255 LPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-----NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVA  329 (570)
T ss_pred             CCCcEEeccccchHHHHHHhhhcCCcceeecc-----CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHH
Confidence            23455777778999999999988875444442     378888888863    479999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      ++||..-.+||+++-+++   +..|.+...-|.....+|+|+....|. +|..| |. +.....+.+-.....+.     
T Consensus       330 h~yGAiTFlDEVHAVGlY---G~rGaGvgerdGvm~kvDiIsGTLgKa-fGcVG-GY-IAat~~LvDmiRSyAaG-----  398 (570)
T KOG1360|consen  330 HKYGAITFLDEVHAVGLY---GPRGAGVGERDGVMHKVDIISGTLGKA-FGCVG-GY-IAATRKLVDMIRSYAAG-----  398 (570)
T ss_pred             HHhCceeeeehhhhhccc---cCCCCCccccCCcchhhhhcccchhhh-ccccc-ce-ehhhhhHHHHHHHhcCc-----
Confidence            999999999999998877   344555555566666789999999998 56554 45 44444444322111221     


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhc-HHH--HHHHHHHHHHHHHHHHHh
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFG-FEA--QVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g--~~~~~~~~~~~~~~~~~~  425 (435)
                         +-+..|-+...++++..+.+.+. .||  +++.-++...+.++++.+
T Consensus       399 ---FIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~  445 (570)
T KOG1360|consen  399 ---FIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME  445 (570)
T ss_pred             ---eEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence               22344666667778888888774 333  333445555666666654

>KOG1359|consensus

Probab=99.34  E-value=2.2e-11  Score=111.26  Aligned_cols=246  Identities=10%  Similarity=0.008  Sum_probs=163.5

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.++-+++++.+..+ +.....--+...+...+.+.+|++-+..   +.++..++-.|+..++.++..+.+.     
T Consensus        83 hPeii~a~~~aleeyGaG-lssvrfIcGtq~iHk~LE~kiAqfh~rE---D~ilypscfdANag~feail~pedA-----  153 (417)
T KOG1359|consen   83 HPEIINAGQKALEEYGAG-LSSVRFICGTQDIHKLLESKIAQFHGRE---DTILYPSCFDANAGAFEAILTPEDA-----  153 (417)
T ss_pred             ChHHHHHHHHHHHHhCCC-ccceeEEecchHHHHHHHHHHHHHhCCC---ceEEeccccccchHHHHHhcChhhh-----
Confidence            899999999999886443 2222333567788888888999987654   4577888899999999999988888     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                         |+..+-.|.++....+...         ....+|+-+++..+.    -+-++|+....-+..|.+.|+++|.+++++
T Consensus       154 ---vfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~k  221 (417)
T KOG1359|consen  154 ---VFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKK  221 (417)
T ss_pred             ---hhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHh
Confidence               8888889999877766543         123456666665443    356777777778889999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      ||.++++|+|++.+++   +..|.+.....--...+|++.....|.++|..| |. ....+.+.+.......+|.-.   
T Consensus       222 YgaLlfiDecHaTgf~---G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gy-ttgp~~li~llrqr~RpylFS---  293 (417)
T KOG1359|consen  222 YGALLFIDECHATGFF---GETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GY-TTGPKPLISLLRQRSRPYLFS---  293 (417)
T ss_pred             cCcEEEEeecccceee---cCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CC-ccCChhHHHHHHhcCCceeec---
Confidence            9999999999998765   555665544443345689999999998654443 44 444444432211112222211   


Q ss_pred             CCccccCCCchHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        381 SPSVSGSRSGGIIATCWAAM-MYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l-~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                           .+-+.+.+..+..++ ..+......++.+.+.+.+++.++
T Consensus       294 -----nslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me  333 (417)
T KOG1359|consen  294 -----NSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFME  333 (417)
T ss_pred             -----CCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence                 122222221122222 223445556666666666666654

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.28  E-value=1.4e-10  Score=117.53  Aligned_cols=265  Identities=11%  Similarity=0.043  Sum_probs=151.6

Q ss_pred             CCCCCCCCcccc---cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSG---AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~---~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...+.   ..-+++|++.+++.+++.+...        +......+.++.+.+++++..  .+.+.++++|+|
T Consensus        46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--------~~~~~~~~~~la~~l~~~~p~--~~~v~f~~sGse  115 (431)
T PRK06209         46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN--------FTRPSAIELDAAESFLELIDG--ADMVKFCKNGSD  115 (431)
T ss_pred             CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC--------CCCCCHHHHHHHHHHHHhCCc--cceEEEecCHHH
Confidence            444554443332   2333589999999999886321        111234455677788887742  247999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEe-CCCchhHHHHHH-----HcCCE--EE--EEecCCCccccHHHHHHHhh---c
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLP-TTAHPAFDKAAN-----YFGMK--VK--HIRLTSSYTVDLAALQSAIT---G  271 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~-~~~~~~~~~~~~-----~~g~~--v~--~vp~~~~~~~d~~~l~~~i~---~  271 (435)
                      |++.|++.++....      +++|+.. ...|+++.....     ..|..  ..  .+++.   .-|++++++++.   +
T Consensus       116 A~e~AlklAr~~tg------r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~  186 (431)
T PRK06209        116 ATSAAVRLARAYTG------RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR---YNDIASLEALFEDHPG  186 (431)
T ss_pred             HHHHHHHHHHHHhC------CCeEEEeccCccccccccccccCCCCCCCChhHhccccccC---CCCHHHHHHHHHhCCC
Confidence            99999999887632      2346554 233332111100     00110  00  01111   127889998885   2


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCcc
Q psy10210        272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTP  350 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p  350 (435)
                      ++.+|++.......+..+.+++|.++|++||+++|+||++.|+...     +.+... ++.   ..|+++++  |.+.+.
T Consensus       187 ~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-----~~g~~~~~gv---~PDi~t~g--K~lggG  256 (431)
T PRK06209        187 RIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-----MRGAQKLYGI---VPDLSCFG--KALGNG  256 (431)
T ss_pred             CEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-----cchhhHHhCC---Ccceeeeh--hhhcCC
Confidence            4667777655433333467999999999999999999999877331     110000 111   24776654  875554


Q ss_pred             CCcEEEEEeCCccccccccccCCCCCCCC-CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        351 KGSSVVLYRDLKYKHCQYFVTSDWPGGNY-GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       351 ~g~g~il~~~~~~~~~~~~~~~~~~gg~~-~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ...|.++.++ ++.+......... .+.+ .+.+.  +.+...++++.++++.+.++++.+++++..+++++.+++
T Consensus       257 ~p~~av~~~~-~i~~~~~~~~~~~-~~~~~~~~T~--~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~  328 (431)
T PRK06209        257 FAVSALAGKR-EYMELGGLEHTDR-ERVFLLSTTH--GAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNE  328 (431)
T ss_pred             cccEEEEEHH-HHHhhhcccccCC-CCceeeccCC--CCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence            5567766654 4433200000000 0000 00111  122245678889999998888888888888887776654

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.24  E-value=1.3e-10  Score=112.31  Aligned_cols=189  Identities=13%  Similarity=0.104  Sum_probs=129.1

Q ss_pred             CCCCCCceEEcCChHHHHHHHHHHHHHHhhh--hcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHH
Q psy10210        189 NGGPETCGCMTSGGTESIMMACKAYRDYARE--EKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ  266 (435)
Q Consensus       189 g~~~~~~~~~t~ggteai~~a~~a~~~~~~~--~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~  266 (435)
                      ++...+.++++++.+.|+.+++.++......  .+|     -+++ +.++.+...++..|++++++..  .......+++
T Consensus        79 ~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g-----~lV~-gg~~~v~d~~~~aG~~l~EvG~--tn~t~~~d~~  150 (395)
T COG1921          79 GLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRG-----ELVE-GGAFRVPDIIRLAGAKLVEVGT--TNRTHLKDYE  150 (395)
T ss_pred             cccchhheeeECCcHHHHHHHHhhhccCCeEEEEcc-----cccc-CCCCChhHHHHHcCCEEEEecc--cCcCCHHHHH
Confidence            3333346899999999999999887652211  011     2344 6888999999999999988863  4557899999


Q ss_pred             HHhhcCceEEEEeCCCCCcccc--cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC
Q psy10210        267 SAITGNTVMLVGSMPNFPYGTM--DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH  344 (435)
Q Consensus       267 ~~i~~~~~~v~~~~p~nptG~~--~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h  344 (435)
                      .+|+++|++++-.+-+|- |..  -+.++++++|+++|+++++|.+.+..+-.     -  ...-.+...|+|.+++|++
T Consensus       151 ~AIne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~-----e--~~l~~~la~GaDLV~~Sgd  222 (395)
T COG1921         151 LAINENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDK-----E--PDLREALALGADLVSFSGD  222 (395)
T ss_pred             HHhccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCcccccc-----c--cchhHHHhcCCCEEEEecc
Confidence            999999998877766653 555  46788999999999999999997654321     0  0011233568999999999


Q ss_pred             CCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210        345 KYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF  405 (435)
Q Consensus       345 K~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~  405 (435)
                      |.+.||. +|+ +++++++..... ..+...+       +  .-.-..+++..++++.+-.
T Consensus       223 KllgGPq-aGi-i~GkKelI~~lq-~~~l~Ra-------l--rv~K~tla~l~~aLe~y~~  271 (395)
T COG1921         223 KLLGGPQ-AGI-IVGKKELIEKLQ-SHPLKRA-------L--RVDKETLAALEAALELYLQ  271 (395)
T ss_pred             hhcCCCc-cce-EechHHHHHHHH-hhhhhhh-------h--hcCcHhHHHHHHHHHHHcC
Confidence            9987877 577 667777653311 1111111       0  0111245678888888765

>KOG0633|consensus

Probab=99.23  E-value=2.3e-11  Score=109.42  Aligned_cols=211  Identities=18%  Similarity=0.114  Sum_probs=137.1

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc--
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG--  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--  271 (435)
                      +++.+..|+-|.|.+.+++.+.+|.+       +|+.-.|+|.-|.-.|...+++++.+|.++++.+|.+++.+.+..  
T Consensus        87 dnic~GvGsDE~ID~iiR~~c~PGke-------KIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds  159 (375)
T KOG0633|consen   87 DNICVGVGSDELIDLIIRCVCDPGKE-------KILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDS  159 (375)
T ss_pred             cceEEecCcHHHHHHHHhheecCCcc-------ceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccc
Confidence            48999999999999999999999854       499999999998888889999999999999999999999988763  


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE-ecCCC-CCC
Q psy10210        272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS-VDTHK-YGF  348 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~-~s~hK-~~~  348 (435)
                      .++++++++|+||||.+-..+.|.++.+.- +..+++||+|-.|.-.       . ........-...++ -..+| +|+
T Consensus       160 ~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~-------~-S~~~lV~kYpNLivlqTlSKsfGL  231 (375)
T KOG0633|consen  160 KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGV-------E-SRMKLVKKYPNLIVLQTLSKSFGL  231 (375)
T ss_pred             cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccc-------c-ccchHhHhCCceeehhhhhhhcCc
Confidence            689999999999999995555555554432 7899999999776421       0 01111111112333 24556 455


Q ss_pred             ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHH--H-hcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        349 TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM--Y-FGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       349 ~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~--~-~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ++..+|+.++. ..+.........+|.-      +..+|+      ++.+++.  . -..+.+.+.+-+-++++-..+.+
T Consensus       232 AGiRvG~~~~~-~~ia~iln~~KaPYNi------S~~~s~------~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~  298 (375)
T KOG0633|consen  232 AGIRVGYGAFP-LSIAEILNRAKAPYNI------SVAGSV------AALAALSDSNGKKMEDVRDAIVRERERLFKELTE  298 (375)
T ss_pred             ceeEeeccccc-HHHHHHHHhccCCccc------cchhHH------HHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhc
Confidence            56666774443 3333221111222211      111211      2223332  1 12456666666666666667777


Q ss_pred             cCCcccc
Q psy10210        426 LSDLWLY  432 (435)
Q Consensus       426 l~~l~~~  432 (435)
                      ++.+..|
T Consensus       299 v~~~~~~  305 (375)
T KOG0633|consen  299 VPFLNDY  305 (375)
T ss_pred             CccccCC
Confidence            7766543

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.19  E-value=5.4e-10  Score=110.11  Aligned_cols=241  Identities=15%  Similarity=0.114  Sum_probs=137.2

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCCCchh-HHHHHHHcCC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKGISLPEIVLPTTAHPA-FDKAANYFGM  247 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~~~~~viv~~~~~~~-~~~~~~~~g~  247 (435)
                      .|.+.++|+    .++++||.+   .+++|..|+.+..++..++.. ++++ .|...+..+++...|.. ....+...|+
T Consensus        73 dpSv~~Lee----~vael~G~E---~alpthqGRgaE~Il~~~~~~~~g~e-~g~~~~~~~v~hn~~fett~g~a~l~G~  144 (467)
T TIGR02617        73 SRSYYALAE----SVKNIFGYQ---YTIPTHQGRGAEQIYIPVLIKKREQE-KGLDRSKMVAFSNYFFDTTQGHSQINGC  144 (467)
T ss_pred             CchHHHHHH----HHHHHhCCc---eEEECCCCchHHHHHHHhhccccccc-ccccccccccceEEEEecchHHHHHcCc
Confidence            345555554    566778775   468898889999999998876 4544 11111111223333333 3445777898


Q ss_pred             EEEEEecC----------CCccccHHHHHHHhhc----CceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEec
Q psy10210        248 KVKHIRLT----------SSYTVDLAALQSAITG----NTVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDC  309 (435)
Q Consensus       248 ~v~~vp~~----------~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~  309 (435)
                      .++.++.+          .+|.+|+++++++|.+    +...+..+-.+|..| .+   ++++++.++|++||+++|.|+
T Consensus       145 ~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDg  224 (467)
T TIGR02617       145 TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDS  224 (467)
T ss_pred             eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEh
Confidence            88776431          3588999999999984    333444443445444 34   889999999999999999999


Q ss_pred             cccchhhhcccc--cCCCCCCC-CCC---CCCccEEEecCCCCCCccCCcEEEEEeCC---ccccccccccCCCCCCCCC
Q psy10210        310 CLGGFLAPFMSA--AGYPLPPF-DFS---LPGVTSISVDTHKYGFTPKGSSVVLYRDL---KYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       310 ~~~~~~~~~~~~--~g~~~~~~-d~~---~~gvd~~~~s~hK~~~~p~g~g~il~~~~---~~~~~~~~~~~~~~gg~~~  380 (435)
                      |--.=-..|.+.  .++...+. +..   ...+|++++|..|-+++|.| |+++.+++   ++.+........+.|-   
T Consensus       225 ARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~EGf---  300 (467)
T TIGR02617       225 ARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQEGF---  300 (467)
T ss_pred             HHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhcccccCC---
Confidence            752110111110  11111111 110   14579999999999889988 67677777   4444422223333332   


Q ss_pred             CCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        381 SPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                        ...|.-++..+.+....|...-.+.|.+.--...+++.+.++
T Consensus       301 --~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~  342 (467)
T TIGR02617       301 --PTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLE  342 (467)
T ss_pred             --cCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHH
Confidence              112234444443333344444444444333333344444443

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.17  E-value=2.7e-10  Score=108.04  Aligned_cols=148  Identities=20%  Similarity=0.228  Sum_probs=98.6

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCCeEE-EeCCCchhHHHHH----------HHcCCEEEEEecCCCccccHHHHHHH
Q psy10210        200 SGGTESIMMACKAYRDYAREEKGISLPEIV-LPTTAHPAFDKAA----------NYFGMKVKHIRLTSSYTVDLAALQSA  268 (435)
Q Consensus       200 ~ggteai~~a~~a~~~~~~~~~g~~~~~vi-v~~~~~~~~~~~~----------~~~g~~v~~vp~~~~~~~d~~~l~~~  268 (435)
                      .+||.|+.+++.++..++|+        ++ +.-.-|....+..          +-+|++...||+.+++.+|.+.++++
T Consensus        79 vSGTHAi~~~Lfg~LrpGD~--------ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~  150 (403)
T PF06838_consen   79 VSGTHAIALALFGVLRPGDE--------LLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKA  150 (403)
T ss_dssp             -SHHHHHHHHHHHH--TT-E--------EEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHH
T ss_pred             cchHHHHHHHHHhcCCCCCe--------EEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHh
Confidence            37899999999999999997        54 3444466666555          34578999999999999999999999


Q ss_pred             hhcCceEEEEeCC----CCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEec
Q psy10210        269 ITGNTVMLVGSMP----NFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD  342 (435)
Q Consensus       269 i~~~~~~v~~~~p----~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s  342 (435)
                      ++++|++|++.--    .-|+=.+++|+++.+++|+.  ++.+.||.|||.|+-           ......-|+|++..|
T Consensus       151 ~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE-----------~~EP~~vGADl~aGS  219 (403)
T PF06838_consen  151 LKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE-----------TQEPTEVGADLMAGS  219 (403)
T ss_dssp             HHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS-----------SS-GGGGT-SEEEEE
T ss_pred             hccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc-----------ccCccccchhheecc
Confidence            9999999999832    22333447888888888876  789999999999875           223344589999999


Q ss_pred             CCCCCCcc-CCcEEEEEeCCccccc
Q psy10210        343 THKYGFTP-KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       343 ~hK~~~~p-~g~g~il~~~~~~~~~  366 (435)
                      .-|..+|. ..+|.-++.++++.+.
T Consensus       220 LIKNpGGgiAptGGYIaGr~~lVe~  244 (403)
T PF06838_consen  220 LIKNPGGGIAPTGGYIAGRKDLVER  244 (403)
T ss_dssp             TTSGGGTTT-SS-EEEEESHHHHHH
T ss_pred             ceeCCCCCccCcCCEEechHHHHHH
Confidence            99984333 3344547777777654

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=99.14  E-value=6.1e-10  Score=107.66  Aligned_cols=231  Identities=17%  Similarity=0.190  Sum_probs=149.9

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCceEEcCChH-HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE
Q psy10210        174 CKMEAEVIKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI  252 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~~~~~~~~t~ggt-eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v  252 (435)
                      .++-..+..-+-+..|.......++++.+| .++.+++.+++.+..      ...|+.+.-.|.+-.+++...|++++.|
T Consensus        55 ~~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~------a~~Viw~ridqkSc~kai~~AGl~~~vV  128 (389)
T PF05889_consen   55 AKLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPK------AKYVIWPRIDQKSCFKAIERAGLEPVVV  128 (389)
T ss_dssp             HHHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--------EEEEEEEETHHHHHHHHHTT-EEEEE
T ss_pred             HHHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccC------CceEEEeeccccchHHHHHhcCCeEEEe
Confidence            344445555556667776444455665554 677777777762211      3469999999999999999999999999


Q ss_pred             ecC---CCccccHHHHHHHhhc---CceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        253 RLT---SSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       253 p~~---~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |..   +.-..|++++++.+.+   +..+.++++.+...|.. |++++|+++|++||++.++..||+-=...++...   
T Consensus       129 ~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i---  205 (389)
T PF05889_consen  129 ENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLI---  205 (389)
T ss_dssp             -EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHH---
T ss_pred             eccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHH---
Confidence            853   3335678888888763   56788888777777777 6699999999999999999999974111000000   


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF  405 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~  405 (435)
                        .-..+...+|.+.-|+-|.+..|.|-+++...++.....   ....|+|=          -+.....-..-++..+|.
T Consensus       206 --~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~---vs~~YpGR----------as~sp~ld~~itLl~LG~  270 (389)
T PF05889_consen  206 --QQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILA---VSKEYPGR----------ASASPSLDLFITLLSLGC  270 (389)
T ss_dssp             --HHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHH---HHHTSHSH----------BTSHHHHHHHHHHHHHHH
T ss_pred             --HHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHH---HHHHhhhh----------hhcccchHHHHHHHHHhh
Confidence              001111236888899999888999977766666655544   23344331          111223456778999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        406 EAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       406 ~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .+|...+.+..+.+..+.+++..
T Consensus       271 ~g~~~ll~~r~~~f~~l~erl~~  293 (389)
T PF05889_consen  271 TGYGALLKERKASFPYLKERLKK  293 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998888777666665543

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.14  E-value=1.3e-09  Score=103.89  Aligned_cols=219  Identities=16%  Similarity=0.188  Sum_probs=138.7

Q ss_pred             eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-C-CCccccHHHHHHHhhc--
Q psy10210        196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-T-SSYTVDLAALQSAITG--  271 (435)
Q Consensus       196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~-~~~~~d~~~l~~~i~~--  271 (435)
                      .+=|.|||.|+.++..-+......      ..|.+++|+|+.+....+..|.++...|. | ++..+|.+.|...+++  
T Consensus        97 t~Qt~GGTGAL~~~A~fl~~~~~~------~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~  170 (396)
T COG1448          97 TVQTLGGTGALRVAADFLARFFPD------ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP  170 (396)
T ss_pred             heecCCcchHHHHHHHHHHHhCCC------ceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCC
Confidence            466789999999999988655443      34999999999999999999999999997 3 4556999998887763  


Q ss_pred             -CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc-cEEEecCCCC
Q psy10210        272 -NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV-TSISVDTHKY  346 (435)
Q Consensus       272 -~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv-d~~~~s~hK~  346 (435)
                       +...+.-..+|||||.-   +.+++|.++.++.+...++|-+|-||.-...++ .++...  +...+. -+++.|+.|.
T Consensus       171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeD-a~~lR~--~a~~~~~~lva~S~SKn  247 (396)
T COG1448         171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEED-AYALRL--FAEVGPELLVASSFSKN  247 (396)
T ss_pred             CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHH-HHHHHH--HHHhCCcEEEEehhhhh
Confidence             55566666889999987   789999999999999999999999886421111 000000  111122 4667789998


Q ss_pred             CCccCC--cEEE--EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHH---HhcHHHHHHHHHHHHHHH
Q psy10210        347 GFTPKG--SSVV--LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM---YFGFEAQVWICVRYHFNY  419 (435)
Q Consensus       347 ~~~p~g--~g~i--l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~---~~g~~g~~~~~~~~~~~~  419 (435)
                       ++-+|  +|.+  +..+++.............-+.|.+|+-.|.+-.+.+.. -..|+   .-..+++++++.+++..+
T Consensus       248 -fgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~-~p~Lra~W~~El~~Mr~Ri~~mR~~l  325 (396)
T COG1448         248 -FGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILN-NPELRAEWEQELEEMRQRILEMRQAL  325 (396)
T ss_pred             -hhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             45433  3443  334443332211111111122333344333221111100 00111   124567888888888887


Q ss_pred             HHHHHh
Q psy10210        420 KSCLQN  425 (435)
Q Consensus       420 ~~~~~~  425 (435)
                      .+.+++
T Consensus       326 v~~L~~  331 (396)
T COG1448         326 VDALKA  331 (396)
T ss_pred             HHHHHh
Confidence            777765

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=99.01  E-value=2.2e-10  Score=109.84  Aligned_cols=170  Identities=16%  Similarity=0.225  Sum_probs=42.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh------HHHHHHHcCCEEEEE
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA------FDKAANYFGMKVKHI  252 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~------~~~~~~~~g~~v~~v  252 (435)
                      .+.+.++.++|+..   .+++++...|+++++.++.. +.+        ||++.-.-..      +....+..|+++++|
T Consensus        51 ~v~~ll~~ltgAea---A~VvNnnaAAv~L~l~~la~-~~E--------vIvsRGelVeiGgsFRip~vm~~sGa~lvEV  118 (367)
T PF03841_consen   51 HVEELLCELTGAEA---ALVVNNNAAAVLLALNTLAK-GKE--------VIVSRGELVEIGGSFRIPDVMRQSGARLVEV  118 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccc---cccccccccccccccccccc-ccc--------ccccccccccccccccccccccccccccccc
Confidence            34556788888753   48888889999999988753 333        7777653222      456677789999888


Q ss_pred             ecCCCccccHHHHHHHhhcCceEEEEeCCCCCc--ccc--cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC--
Q psy10210        253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPY--GTM--DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL--  326 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~npt--G~~--~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~--  326 (435)
                      -..  .+..+++++++|+++|.+++-.+++|..  |..  -+++++++++++|++++++|...|.+.-.  ...|.+.  
T Consensus       119 Gtt--N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl--~~~gl~~Ep  194 (367)
T PF03841_consen  119 GTT--NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDL--SPYGLPDEP  194 (367)
T ss_dssp             --------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHH--HTT------
T ss_pred             ccc--cccccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCc--ccccCcccc
Confidence            753  3457899999999999999988877753  434  47999999999999999999987655421  1112221  


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      ...+....|+|.+++|+.|.++||. +|+ ++.++++.+.
T Consensus       195 ~v~~~~~~GaDlV~fSGdKlLGGPQ-aGi-I~Gkk~lI~~  232 (367)
T PF03841_consen  195 TVQEYLAAGADLVTFSGDKLLGGPQ-AGI-IVGKKELIEK  232 (367)
T ss_dssp             ----CCCCT-SEEEEETTSSSSS-S--EE-EEEEHHHHHH
T ss_pred             HHHHHhhcCCCEEEEECCCcCCCCC-eEE-EEeCHHHHHH
Confidence            1335567899999999999987776 687 5566666543

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG1357|consensus

Probab=98.98  E-value=1e-08  Score=99.22  Aligned_cols=250  Identities=14%  Similarity=0.081  Sum_probs=156.8

Q ss_pred             HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeE
Q psy10210        149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEI  228 (435)
Q Consensus       149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~v  228 (435)
                      .+...+.+.++... .-.+...-+..+...++.+.+|+++|.+..  +++..| -..+.+.+-++..++..        |
T Consensus       157 a~~~~~~~~kygl~-~css~~e~G~~~~hkelE~l~A~f~g~e~a--~vF~mG-f~TNs~~~p~l~~~gsL--------I  224 (519)
T KOG1357|consen  157 AEASLKSFDKYGLS-RCSSRHEAGTTEEHKELEELVARFLGVEDA--IVFSMG-FATNSMNIPSLLGKGSL--------I  224 (519)
T ss_pred             ChHHHHHHHHhccc-ccccchhcccHHHHHHHHHHHHHhcCCcce--EEEecc-ccccccCcceeecCCcc--------e
Confidence            34444455544322 222333456788889999999999998653  455444 55555666666666654        8


Q ss_pred             EEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-------C------ceEEEEeCCCCCcccccCHHHHH
Q psy10210        229 VLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-------N------TVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       229 iv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-------~------~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                      +..+-+|.++...|+..|+.++....+     |+++||+.+.+       +      ..+|++......-|.+.++.++.
T Consensus       225 iSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vv  299 (519)
T KOG1357|consen  225 ISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVV  299 (519)
T ss_pred             eeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHH
Confidence            888889999999999999999888754     45566665542       2      24556666666889999999999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW  374 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~  374 (435)
                      +++++|..+++.||+++.++.   ...|.+.-.+ ......+|++-..+.|.+ +..| |. +..++++.+...   .+-
T Consensus       300 alkkkykayl~lDEAHSiGA~---g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~G-Gy-iagsk~lid~lr---t~s  370 (519)
T KOG1357|consen  300 ALKKKYKAYLYLDEAHSIGAM---GATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAG-GY-IAGSKELIDYLR---TPS  370 (519)
T ss_pred             HhhccccEEEEeecccccccc---CCCCcceeeccCCCchhheeecceehhhc-cccc-ce-ecCcHHHHhhhc---cCC
Confidence            999999999999999998876   2334433222 222234688888899984 4332 34 556666554321   111


Q ss_pred             CCCCCCCCccccCCCchHHHHHHHHHHHh----cHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        375 PGGNYGSPSVSGSRSGGIIATCWAAMMYF----GFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       375 ~gg~~~~~~~~gsr~~~~ia~~~a~l~~~----g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      ....|++   .-|.+.+  .....+++.+    |.+.-+++++++.++...+...+++.
T Consensus       371 ~~~~yat---~~sppva--qq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~  424 (519)
T KOG1357|consen  371 PSALYAT---SLSPPVA--QQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM  424 (519)
T ss_pred             Cceeecc---cCChHHH--HHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence            1111211   1122211  1223334433    45666777888877777777666543

>KOG2467|consensus

Probab=98.95  E-value=1.2e-07  Score=89.60  Aligned_cols=270  Identities=18%  Similarity=0.201  Sum_probs=163.6

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      .....+++.+-..+..   .|.+|.-+- -|.|..+.                        +-++|.-+++...+.||++
T Consensus        51 Fts~aVmeAlGS~ltN---KYSEGyPG~-RYYGGne~------------------------ID~iE~LCq~RALeaF~ld  102 (477)
T KOG2467|consen   51 FTSRAVMEALGSCLTN---KYSEGYPGA-RYYGGNEY------------------------IDQIELLCQKRALEAFGLD  102 (477)
T ss_pred             chHHHHHHHHhHHhhc---ccccCCCcc-cccCcchH------------------------HHHHHHHHHHHHHHHhCCC
Confidence            5667778877766553   454444332 22222222                        3345555566667788888


Q ss_pred             CCCceEEc--CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH--HHHcCCE---EE--EEecC-CCcccc
Q psy10210        192 PETCGCMT--SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA--ANYFGMK---VK--HIRLT-SSYTVD  261 (435)
Q Consensus       192 ~~~~~~~t--~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~--~~~~g~~---v~--~vp~~-~~~~~d  261 (435)
                      ++.+++-+  -+|+-|++.+..++..++++--|     .=.|+-.|-+.--.  .+...+.   ..  ...+| .+|-+|
T Consensus       103 p~kWGVNVQp~SGSPANfavYtall~Ph~RiMG-----LDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~ID  177 (477)
T KOG2467|consen  103 PEKWGVNVQPYSGSPANFAVYTALLKPHERIMG-----LDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYID  177 (477)
T ss_pred             HHHCceeeccCCCCchhhHHHhhhcCCCCeeee-----ccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCcee
Confidence            87665443  46789999999999999887222     12344444432111  1111111   11  12244 678899


Q ss_pred             HHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        262 LAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       262 ~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      -|.|++.-. =++++|+.-.-.  .-..-|..++.++|.+.|.++.+|-++-.++..    +|.-..||+.    +|+++
T Consensus       178 YD~Le~~A~~frPk~iiaG~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVA----A~vipsPFey----~DiVT  247 (477)
T KOG2467|consen  178 YDKLEKTATLFRPKLIIAGTSA--YSRLIDYARFRKIADKVGAYLMADMAHISGLVA----AGVIPSPFEY----CDIVT  247 (477)
T ss_pred             hHHHHHHHHhcCCcEEEecccc--chhhccHHHHHHHHHhcCceeehhhhhHHHHHh----cccCCCcccc----cceee
Confidence            999987543 477777643322  233468899999999999999999998766552    2443346654    89999


Q ss_pred             ecCCCCCCccCCcEEEEEeCC--ccccc-----cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH
Q psy10210        341 VDTHKYGFTPKGSSVVLYRDL--KYKHC-----QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV  413 (435)
Q Consensus       341 ~s~hK~~~~p~g~g~il~~~~--~~~~~-----~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~  413 (435)
                      ..+||.+-||.| |+|.+|+-  .....     .|.+..-...  ..-|.++|..-...|++...+|+.-....|.+..+
T Consensus       248 TTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydlE~kINf--aVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~  324 (477)
T KOG2467|consen  248 TTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDLEDKINF--AVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQK  324 (477)
T ss_pred             ccccccccCCcc-eeEEEeccCCcCCCCCCCcceechhhhhhh--hccccccCCCCcchHHHHHHHHHhhCCHHHHHHHH
Confidence            999999989986 77788872  11100     0100000000  01134455555556666777788877788888888


Q ss_pred             HHHHHHHHHHHhcC
Q psy10210        414 RYHFNYKSCLQNLS  427 (435)
Q Consensus       414 ~~~~~~~~~~~~l~  427 (435)
                      ++..+++.+.+.|.
T Consensus       325 qV~~Nakala~~l~  338 (477)
T KOG2467|consen  325 QVLKNAKALASALI  338 (477)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88777777766553

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=98.95  E-value=4.7e-08  Score=93.62  Aligned_cols=224  Identities=10%  Similarity=0.045  Sum_probs=116.3

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhh--h---cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYARE--E---KGISLPEIVLPTTAHPAFDKAANYFGMKVKHI  252 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~--~---~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v  252 (435)
                      |+++.+++++|.+++ ++++..+++-.++.-+.+. .-.|-.  .   ....+.+.++|.|.|.-+...++.+|++.+.|
T Consensus        73 e~r~l~a~llgv~~~-~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~V  151 (425)
T PF12897_consen   73 EARELFAELLGVPPE-NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPV  151 (425)
T ss_dssp             HHHHHHHHHHTS-GG-GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEE
T ss_pred             HHHHHHHHHhCCCHH-HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEec
Confidence            344455566666665 7777666554443322221 111111  0   01235679999999999999999999999999


Q ss_pred             ecCCCccccHHHHHHHhhc--CceEEEEe-CCCCCcccccC---HHHHHHH-HHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        253 RLTSSYTVDLAALQSAITG--NTVMLVGS-MPNFPYGTMDD---IGAIAKL-GEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~--~~~~v~~~-~p~nptG~~~~---i~~i~~l-a~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |++++| +|++.+++++.+  .++.++.. -.+||||.+-.   +++++.+ ....+..++.|.+|+---+.  ..... 
T Consensus       152 pM~~dG-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~--~~~~~-  227 (425)
T PF12897_consen  152 PMTEDG-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLY--DEEPR-  227 (425)
T ss_dssp             EEETTE-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSS--SSSS--
T ss_pred             CCCCCC-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeecc--ccccc-
Confidence            999888 899999999854  45655544 67899999944   4555554 23579999999999754331  00000 


Q ss_pred             CCCCCC-------CCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHH
Q psy10210        326 LPPFDF-------SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWA  398 (435)
Q Consensus       326 ~~~~d~-------~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a  398 (435)
                      ..+.+.       ..++.-....|++|.-++..|++++..+...+..........-.|             ..- .-+..
T Consensus       228 ~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIg-------------pdK-vNQLR  293 (425)
T PF12897_consen  228 DALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIG-------------PDK-VNQLR  293 (425)
T ss_dssp             -----HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S----------------H-HHHHH
T ss_pred             hhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeC-------------ccH-HHHHH
Confidence            000111       122335667789998788889998666665443221111110011             011 13334


Q ss_pred             HHHHhc-HH-HHHHHHHHHHHHHHH
Q psy10210        399 AMMYFG-FE-AQVWICVRYHFNYKS  421 (435)
Q Consensus       399 ~l~~~g-~~-g~~~~~~~~~~~~~~  421 (435)
                      -.+.++ .+ |+.++++++.+.++-
T Consensus       294 Hvrff~d~~gGv~aHM~kHa~il~P  318 (425)
T PF12897_consen  294 HVRFFKDAEGGVRAHMRKHAAILRP  318 (425)
T ss_dssp             HHHHHHSHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHhcChhhHHHHHHHHHHHHHhh
Confidence            445554 46 888888888776543

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.83  E-value=3e-08  Score=91.25  Aligned_cols=148  Identities=18%  Similarity=0.203  Sum_probs=110.0

Q ss_pred             ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----------HHHcCCEEEEEecCCCccccHHHHHHHhh
Q psy10210        201 GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----------ANYFGMKVKHIRLTSSYTVDLAALQSAIT  270 (435)
Q Consensus       201 ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----------~~~~g~~v~~vp~~~~~~~d~~~l~~~i~  270 (435)
                      +||.||..++..++.++|+       -+.+.-.-|......          .+-+|++.+-+|+..+|.+|.+.++.+++
T Consensus        91 sGTHAI~~aLfg~LRpgDe-------ll~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~  163 (416)
T COG4100          91 SGTHAIACALFGILRPGDE-------LLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS  163 (416)
T ss_pred             cchhHHHHHHHhccCCCCe-------EEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC
Confidence            5699999999999999987       233333445554443          34457788899998899999999999999


Q ss_pred             cCceEEEEeC----CCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC
Q psy10210        271 GNTVMLVGSM----PNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH  344 (435)
Q Consensus       271 ~~~~~v~~~~----p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h  344 (435)
                      ++|++|.+.-    ..-|+=.+++++++.++.++-  ++.+.||.|||.|+-           ......-|+|.+..|.-
T Consensus       164 ~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE-----------~~EPt~vGaDliAGSLI  232 (416)
T COG4100         164 DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE-----------EKEPTHVGADLIAGSLI  232 (416)
T ss_pred             ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh-----------ccCccccchhhhcccee
Confidence            9999999873    334555668899999999986  688999999999875           23344558999999999


Q ss_pred             CCCCcc-CCcEEEEEeCCccccc
Q psy10210        345 KYGFTP-KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       345 K~~~~p-~g~g~il~~~~~~~~~  366 (435)
                      |.-+|. .-+|.-+..++++.+.
T Consensus       233 KNpGGgiaktGGYiaGk~~~ve~  255 (416)
T COG4100         233 KNPGGGIAKTGGYIAGKAELVEA  255 (416)
T ss_pred             eCCCCceeeccceeechHHHHHh
Confidence            984333 2234436666666544

>KOG2040|consensus

Probab=98.79  E-value=4.2e-07  Score=91.57  Aligned_cols=251  Identities=15%  Similarity=0.161  Sum_probs=155.1

Q ss_pred             hhchhhHHHHHHHHHHHH----HHHHh-hhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccC
Q psy10210         70 RKIPAVRKKLEEETGKVA----KLFQD-DIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYY  143 (435)
Q Consensus        70 ~~lp~~~~~i~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~  143 (435)
                      |++-..+....++++.+.    +++.+ .+.++. ...-...+|+ +..+.++++.+.+...++. .|.+- ..+|+...
T Consensus        55 RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~I-r~~~~l~~~~-~~~E~eml~~l~~ia~kNk-~~ksfIGmGYyn~~  131 (1001)
T KOG2040|consen   55 RHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSI-RLKRPLKMDK-PLCESEMLQHLEDIASKNK-IWKSFIGMGYYNTH  131 (1001)
T ss_pred             ccCCCCchHHHHHHHhcChhhHHHHHHhhcchhh-cccchhcCCC-CcCHHHHHHHHHHHHhhhh-HHHHhhcccccccc
Confidence            444444555666665443    23332 222221 1222334544 4899999999999877654 44321 22222222


Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      -++.+.+-+-+--..+....|++++.+++..+-......+++++.|.+-. +..+-.-||.|-...+.+.+...      
T Consensus       132 vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~a-NASLLDEgTAaaEAm~l~~~~~k------  204 (1001)
T KOG2040|consen  132 VPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMA-NASLLDEGTAAAEAMALCNRINK------  204 (1001)
T ss_pred             CcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCccc-chhhhccchhHHHHHHHHHhhcc------
Confidence            23433333333222222235999999999999999999999999999865 56666667777666665554322      


Q ss_pred             CCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                       +.++++...+|+-....++.    +|++++..+        +++.. ...++...+++..|.+ .|.+.+..++++.++
T Consensus       205 -rkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~~~~~-~s~~~v~gvlvQYP~t-~G~i~d~~el~~~a~  273 (1001)
T KOG2040|consen  205 -RKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------IKEAD-YSSKDVSGVLVQYPDT-EGSVLDFDELVELAH  273 (1001)
T ss_pred             -cceEEecCCCCcchhhhhhccccccceeEEecC--------HHHhh-ccccceeEEEEEcCCC-CCcccCHHHHHHHhh
Confidence             23499999999987766554    344433322        22211 1234678899999987 799999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCc
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS  353 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~  353 (435)
                      +.+..+++-.-.-.+.+  ++      +|   .+.|+|+...|+..+| .|.|-
T Consensus       274 ~~~s~vv~atDLLaLti--Lr------pP---gefGaDIavGSsQRFG-VPlGY  315 (1001)
T KOG2040|consen  274 ANGSLVVMATDLLALTI--LR------PP---GEFGADIAVGSSQRFG-VPLGY  315 (1001)
T ss_pred             ccCceEEEeehhhHHHc--cC------Ch---hhcCceeeeccccccC-ccccC
Confidence            99988776544322222  11      12   2458999999999984 66553

>KOG1358|consensus

Probab=98.74  E-value=3.3e-07  Score=87.49  Aligned_cols=203  Identities=13%  Similarity=0.108  Sum_probs=144.6

Q ss_pred             ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210        141 VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE  220 (435)
Q Consensus       141 ~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~  220 (435)
                      ...+++++.+.....++++.-+ ...|..|=+..+...++.+.+|+++|.+..   ++.+-|-.++..++-++..+||- 
T Consensus       106 ~l~~~~~ike~a~~~lrkyGvG-sCGPrGFYGt~DvHldlE~~iakF~G~E~a---ivYs~gF~ti~S~ipafsKrGDI-  180 (467)
T KOG1358|consen  106 GLIENEEIKEEASFTLRKYGVG-SCGPRGFYGTIDVHLDLEKRIAKFMGTEDA---IVYSYGFSTIESAIPAFSKRGDI-  180 (467)
T ss_pred             hhcccHHHHHHHHHHHHHhCCC-CcCCCcccccceeecccHHHHHHhhCCcce---eeeccccchhhhcchhhhccCcE-
Confidence            4446889999998888887444 344555556666667777889999998654   77777788899999999988886 


Q ss_pred             cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcC-------------ceEEEEeCCCCCccc
Q psy10210        221 KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGN-------------TVMLVGSMPNFPYGT  287 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~-------------~~~v~~~~p~nptG~  287 (435)
                             +.+..-.+.+..+..+...-.+.+...     .|++++++.+.++             .+.|++..---++|.
T Consensus       181 -------i~~de~~nfaIq~GlqlSRS~i~~Fkh-----ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~  248 (467)
T KOG1358|consen  181 -------IFVDEAVNFAIQKGLQLSRSTISYFKH-----NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGD  248 (467)
T ss_pred             -------EEEehhhhHHHHHHHhhhhheeEEecC-----CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCc
Confidence                   888888899999999888888877764     3667776665432             256777777777999


Q ss_pred             ccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        288 MDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       288 ~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      +.++.+|.++..||...++.|+.++-+++   ++.|.+... +......+|.++.+..-. .+.  .|..++++.-+..+
T Consensus       249 i~pl~~iv~lk~Kyk~RvildEs~SfG~l---g~~GrGvteH~~v~~~~iDiv~~sm~~a-las--~GgFc~G~~~i~~h  322 (467)
T KOG1358|consen  249 ICPLPEIVKLKNKYKFRVILDESLSFGVL---GKTGRGVTEHFGVPITDIDIVTASMETA-LAS--GGGFCAGKSFIADH  322 (467)
T ss_pred             ccccHHHHHHHhhheEEEEEecccccccc---cccCccccccCCCCccceeeeeeccccc-ccc--cCceeecceeeEee
Confidence            99999999999999999999999987766   444444322 122223468888775443 232  23335555444433

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.68  E-value=9.1e-07  Score=83.68  Aligned_cols=165  Identities=17%  Similarity=0.204  Sum_probs=106.8

Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH-HHHHHHcCCEEEEEecCC----------CccccHH
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF-DKAANYFGMKVKHIRLTS----------SYTVDLA  263 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~-~~~~~~~g~~v~~vp~~~----------~~~~d~~  263 (435)
                      -++.|.-|..|-.+..-.+++.++..+|   .++++++..|.-. ..-.+..|..++.+++++          .|.+|++
T Consensus        96 ~~iPthQGRgAE~Il~~i~ik~~~~~pg---~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~  172 (471)
T COG3033          96 YTIPTHQGRGAENILIPILIKKGEQEPG---SKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLE  172 (471)
T ss_pred             eeeeccCCccHHHHHHHHHhhhccccCC---ccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHH
Confidence            3455655555555555555555554333   4466666666654 444666788888887752          3568999


Q ss_pred             HHHHHhhc----CceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC---
Q psy10210        264 ALQSAITG----NTVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS---  332 (435)
Q Consensus       264 ~l~~~i~~----~~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~---  332 (435)
                      .|++.|++    |...|+++-.+|.-| ..   ++++++.++|++|+++++.|+|-..=-.-|.+....+-..+...   
T Consensus       173 kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~Ia  252 (471)
T COG3033         173 KLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIA  252 (471)
T ss_pred             HHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHH
Confidence            99999975    566777665555554 33   89999999999999999999985321111222211110111110   


Q ss_pred             ---CCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        333 ---LPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       333 ---~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                         ..-+|-+++|..|=++.+.| |+++++|+.+
T Consensus       253 rEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~  285 (471)
T COG3033         253 REMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSF  285 (471)
T ss_pred             HHHHhhhhhheeeccccceeccc-cEEEecCccH
Confidence               01249999999999889987 8889999854

>KOG1403|consensus

Probab=98.64  E-value=2.6e-07  Score=85.21  Aligned_cols=252  Identities=13%  Similarity=0.081  Sum_probs=148.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.++.++.+....-.+.       .+..-..+..+.+..-+  +.-+.++++++|+||+.+|++.+|+....    
T Consensus        62 chp~VV~A~~kQmat~~tN~R-------Flhd~lv~cA~~l~stl--PeLsvc~F~NSGSEANDLALRLAR~ftkh----  128 (452)
T KOG1403|consen   62 CHPEVVRAGAKQMATISTNNR-------FLHDELVQCARTLTSTL--PELSVCFFVNSGSEANDLALRLARNFTKH----  128 (452)
T ss_pred             CCHHHHHHHHHHHhHhcccch-------hhHHHHHHHHHHHhhcC--CCceEEEEecCCchhhHHHHHHHHhhccc----
Confidence            389999999988876432221       11111222222222222  22246899999999999999999877543    


Q ss_pred             CCCeEEEeCCCchhHHHH-HHHc------C--C-E--EEEE-ecCCCc---------------cccHHHHHHHhhc----
Q psy10210        224 SLPEIVLPTTAHPAFDKA-ANYF------G--M-K--VKHI-RLTSSY---------------TVDLAALQSAITG----  271 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~-~~~~------g--~-~--v~~v-p~~~~~---------------~~d~~~l~~~i~~----  271 (435)
                        ..+|+-+.+|++.... .+..      |  . +  .++| |+.+.+               ..-.+.+++.+++    
T Consensus       129 --qDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~  206 (452)
T KOG1403|consen  129 --QDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAK  206 (452)
T ss_pred             --CceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhc
Confidence              2477778887774332 2211      1  1 2  2222 332111               1112334444432    


Q ss_pred             --CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecC
Q psy10210        272 --NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDT  343 (435)
Q Consensus       272 --~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~  343 (435)
                        ...+.+..+-++--|.+    +.++++++..+.+|-..|.||++.||-..     |.  .-|.|...+.  |++++. 
T Consensus       207 g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRv-----G~--hyWafq~y~fiPDIVtmg-  278 (452)
T KOG1403|consen  207 GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRV-----GS--HYWAFQTYNFIPDIVTMG-  278 (452)
T ss_pred             CCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccccc-----ch--hhhhhhhhccccchheec-
Confidence              23455555666666776    56899999999999999999999988542     21  1234433332  666655 


Q ss_pred             CCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210        344 HKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCL  423 (435)
Q Consensus       344 hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~  423 (435)
                       |-++..-+++.+. ..+++.+..-.....|. .+||..++++       |...+.|+.+..+.+.++.+++.+.+..++
T Consensus       279 -KpmGNGhPVa~Va-ttkeIA~Af~atgv~YF-NTyGGnPVsC-------Av~laVm~v~e~E~Lq~ha~~vG~~L~~lL  348 (452)
T KOG1403|consen  279 -KPMGNGHPVAAVA-TTKEIAQAFHATGVEYF-NTYGGNPVSC-------AVGLAVMRVCEDENLQEHAQQVGEKLEVLL  348 (452)
T ss_pred             -ccCCCCCeeeEEe-ccHHHHHHhccccceeh-hccCCCchhH-------HHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence             6544444566644 44555443111111111 1233333333       678899999999999999999999999888


Q ss_pred             HhcCC
Q psy10210        424 QNLSD  428 (435)
Q Consensus       424 ~~l~~  428 (435)
                      +.++.
T Consensus       349 ~~~k~  353 (452)
T KOG1403|consen  349 RRLKQ  353 (452)
T ss_pred             HHHhh
Confidence            87653

>KOG3846|consensus

Probab=98.21  E-value=1.1e-05  Score=74.99  Aligned_cols=182  Identities=17%  Similarity=0.138  Sum_probs=128.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCC----chhHHHHHHHcCCEEEE---
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA----HPAFDKAANYFGMKVKH---  251 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~----~~~~~~~~~~~g~~v~~---  251 (435)
                      -+...++.+.|+... ++.+.++-|.-+...+.++-++..+     +-+|+...-+    |+++...++..|+.+..   
T Consensus       115 ~il~l~~~iVGA~e~-EvavmNsLTvNlh~Ll~sFyKPTek-----R~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~  188 (465)
T KOG3846|consen  115 PILPLLAPIVGAQEN-EVAVMNSLTVNLHSLLISFYKPTEK-----RFKILLEKKAFPSDHYAIESQCKLHGISPENSMI  188 (465)
T ss_pred             hhhhhhhhhccCCch-hhhhHhhhhhHHHHHHHHhcCCcch-----hhhhhhccCCCCchHHHHHhhhhhcCCChHHheE
Confidence            445567788888776 7888888888888888887766554     3347776654    55577778888876432   


Q ss_pred             -EecC-CCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        252 -IRLT-SSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       252 -vp~~-~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                       +... ....+..+++.+.|.+   ..++|+++..++-||..-++.+|....+..|+++=.|-+++-+           -
T Consensus       189 ~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg-----------N  257 (465)
T KOG3846|consen  189 QIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG-----------N  257 (465)
T ss_pred             EecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc-----------C
Confidence             2222 2334667777777764   4688999999999999999999997777779998889887533           2


Q ss_pred             CCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      .|+...++|||+.+..+.||+.++ .|+|.+.+.. +..+.+......|.|..
T Consensus       258 VpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHe-kh~~~~~prl~GWwgh~  309 (465)
T KOG3846|consen  258 VPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHE-KHTKESLPRLAGWWGHD  309 (465)
T ss_pred             CceEEeecCCceEEEeeecccccCCCccceeeeeh-hhhcchhhHHhhhccCC
Confidence            377788899999999999998755 5566644444 43333333445565543

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.14  E-value=0.00012  Score=70.19  Aligned_cols=170  Identities=16%  Similarity=0.062  Sum_probs=105.3

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcC-ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTS-GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG  246 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~-ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g  246 (435)
                      +.+....++..++++.+.++++.|.+..|++.. |+|....++...+......      .-|.....+-.++..+-....
T Consensus        43 HRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~------~yv~~g~Ws~~a~~eA~~~~~  116 (365)
T COG1932          43 HRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGT------DYVDTGAWSEFAIKEAKKVGK  116 (365)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCc------eeEeeeehhHhHHHHHHHhcc
Confidence            445667788888999999999999988887775 5688888888887644321      013333333333444333322


Q ss_pred             -CEEEEEecCCC---ccccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210        247 -MKVKHIRLTSS---YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA  321 (435)
Q Consensus       247 -~~v~~vp~~~~---~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~  321 (435)
                       .++........   .-++++...  +.++...|..++-.+-+|+- .+...+..     +.++++|.....+..     
T Consensus       117 ~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr-----  184 (365)
T COG1932         117 QPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSR-----  184 (365)
T ss_pred             cccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcC-----
Confidence             23322222111   223444333  34445557777766778876 22222211     278999988765533     


Q ss_pred             cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        322 AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                            ++|+..  .|.+.++.+|. .||.|.+++++|+..+.
T Consensus       185 ------~iDvsk--~dviyagaQKn-lGpaGltvvIvr~~~l~  218 (365)
T COG1932         185 ------PIDVSK--YDVIYAGAQKN-LGPAGLTVVIVRPDLLE  218 (365)
T ss_pred             ------CCChhH--cceEEEehhhc-cCccceEEEEEcHHHHh
Confidence                  566654  68999999999 69999999888876543

>KOG1411|consensus

Probab=97.99  E-value=1.3e-05  Score=75.52  Aligned_cols=213  Identities=14%  Similarity=0.148  Sum_probs=132.4

Q ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc---Cce
Q psy10210        200 SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG---NTV  274 (435)
Q Consensus       200 ~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~---~~~  274 (435)
                      -+||.|+..+..-+...-      +...|.+|+|++....+.....|+.+..+..-  .+..+|.+.+.+.+.+   ...
T Consensus       127 lSGTGaLriga~Fl~~f~------~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~  200 (427)
T KOG1411|consen  127 LSGTGALRVGAEFLARFY------PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSI  200 (427)
T ss_pred             ccCcchhhHHHHHHHhhc------cccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcE
Confidence            577888877776553222      23459999999999999999999988777542  5566888887776654   234


Q ss_pred             EEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc-EEEecCCCCCCcc
Q psy10210        275 MLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT-SISVDTHKYGFTP  350 (435)
Q Consensus       275 ~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd-~~~~s~hK~~~~p  350 (435)
                      +++-...+||||+=   +.+++|.++.++.+..-+.|.+|-||...-.....+.  ---|...|.. .++-|..|.+ |-
T Consensus       201 ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~a--vR~F~~~g~~~~laQSyAKNM-GL  277 (427)
T KOG1411|consen  201 ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQA--VRLFVEDGHEILLAQSYAKNM-GL  277 (427)
T ss_pred             EEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHH--HHHHHHcCCceEeehhhhhhc-ch
Confidence            44445679999976   7899999999999999999999998865211000000  0001122333 4566888974 43


Q ss_pred             CC--cEE--EEEeCCccccccccccCCCCCCCCCCCccccCCCchHHH------HHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy10210        351 KG--SSV--VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIA------TCWAAMMYFGFEAQVWICVRYHFNYK  420 (435)
Q Consensus       351 ~g--~g~--il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia------~~~a~l~~~g~~g~~~~~~~~~~~~~  420 (435)
                      +|  +|.  +++.+.+...+......-...+.|.+|++.|.|-.+.+.      ..|.    .......+++..+++.+.
T Consensus       278 YgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~----~evk~MadRi~~mR~~L~  353 (427)
T KOG1411|consen  278 YGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWL----GEVKGMADRIISMRQQLF  353 (427)
T ss_pred             hhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHH----HHHHHHHHhhhhhHHHHh
Confidence            33  333  255655543321111122233456678888877654432      2332    123556677777777777


Q ss_pred             HHHHh
Q psy10210        421 SCLQN  425 (435)
Q Consensus       421 ~~~~~  425 (435)
                      ..++.
T Consensus       354 d~L~~  358 (427)
T KOG1411|consen  354 DALEK  358 (427)
T ss_pred             HHhhc
Confidence            76664

>KOG3843|consensus

Probab=97.94  E-value=2.9e-05  Score=70.72  Aligned_cols=229  Identities=14%  Similarity=0.106  Sum_probs=139.4

Q ss_pred             HHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        175 KMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      .+-.++....-.+.|...- .|+++.-..-.++.+++.++|.+..     +...|+-+.-...+-.+..-..|.+.+.|.
T Consensus        57 ~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krp-----kakyiiw~ridqks~~ksi~~agfepiiie  131 (432)
T KOG3843|consen   57 CISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRP-----KAKYIIWLRIDQKSCFKSIIHAGFEPIIIE  131 (432)
T ss_pred             HHHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCC-----cccEEEEEecchHHHHHHHHhcCCCceeee
Confidence            4444555555566665433 2444444444677788888764332     234588888888888888888899887775


Q ss_pred             c--C-CCccccHHHHHHHhhcC-c-eEEEEeCC--CCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        254 L--T-SSYTVDLAALQSAITGN-T-VMLVGSMP--NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       254 ~--~-~~~~~d~~~l~~~i~~~-~-~~v~~~~p--~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      -  + +....|++.+++.+.+. . +.+++-..  .+..-..|.+++|+.+|..|+++-+|..+||--.--.+...    
T Consensus       132 ~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~i----  207 (432)
T KOG3843|consen  132 NILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKI----  207 (432)
T ss_pred             ccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHH----
Confidence            3  2 33456888888888752 2 22222221  12222338999999999999999999999974322111000    


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                       .-..+...+|.++.|..|....|.|..++..-+..+.+.   ....|+|-...+|+          .....++..+|..
T Consensus       208 -aa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~---iak~ypgrasa~ps----------~dllitll~~gqn  273 (432)
T KOG3843|consen  208 -AAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE---IAKMYPGRASASPS----------LDLLITLLSLGQN  273 (432)
T ss_pred             -HHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH---HHHhCCCccccCcc----------HHHHHHHHHhchh
Confidence             011223346889999999988898855544333334333   23334432211111          2455678889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q psy10210        407 AQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +|.+...+..+.+.++.+++
T Consensus       274 ~f~e~~~eqkemf~~l~~ki  293 (432)
T KOG3843|consen  274 AFKELFGEQKEMFLKLRNKI  293 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99888877777666655544

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=97.92  E-value=3.3e-05  Score=66.53  Aligned_cols=66  Identities=11%  Similarity=0.053  Sum_probs=52.6

Q ss_pred             ccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhh
Q psy10210        139 GAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR  218 (435)
Q Consensus       139 ~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~  218 (435)
                      |..+.|.+++|+++++++.+....+ ..                       .+++ ++++|+|+++++.+++.++.++++
T Consensus        88 Y~~~~G~~~lR~AiA~~l~~~~g~~-v~-----------------------~~pd-~Ivvt~Ga~~al~~l~~~l~dpGD  142 (153)
T PLN02994         88 FQDYHGLANFRKAIANFMAEARGGR-VK-----------------------FDAD-MIVLSAGATAANEIIMFCIADPGD  142 (153)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHhCCC-Cc-----------------------cchh-heEEcCCHHHHHHHHHHHHcCCCC
Confidence            4466789999999999987753311 00                       1333 899999999999999999999998


Q ss_pred             hhcCCCCCeEEEeCCCchh
Q psy10210        219 EEKGISLPEIVLPTTAHPA  237 (435)
Q Consensus       219 ~~~g~~~~~viv~~~~~~~  237 (435)
                      .        |++++|.|++
T Consensus       143 ~--------VlVp~P~Y~~  153 (153)
T PLN02994        143 A--------FLVPTPYYAA  153 (153)
T ss_pred             E--------EEEeCCCCCC
Confidence            8        9999999974

>KOG1412|consensus

Probab=97.74  E-value=0.001  Score=62.31  Aligned_cols=115  Identities=15%  Similarity=0.186  Sum_probs=87.8

Q ss_pred             eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC-CEEEEEecC--CCccccHHHHHHHhhcC
Q psy10210        196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG-MKVKHIRLT--SSYTVDLAALQSAITGN  272 (435)
Q Consensus       196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g-~~v~~vp~~--~~~~~d~~~l~~~i~~~  272 (435)
                      ++-+-+||.|+.++..-+...-.      +..|+++.|++......++..| .++...|.-  ++-.+|++.+...+...
T Consensus       102 ~vQslsGTGAl~~~A~Fl~~~~~------~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A  175 (410)
T KOG1412|consen  102 GVQSLSGTGALRIAADFLATFYN------KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA  175 (410)
T ss_pred             ceeeccccchhhhhHHHHHHhcc------cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC
Confidence            45566889999988876643322      2359999999999999999999 456666652  44568998888887653


Q ss_pred             c--eEEEEeC-CCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210        273 T--VMLVGSM-PNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLA  316 (435)
Q Consensus       273 ~--~~v~~~~-p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~  316 (435)
                      +  ..+++.. .+||||.-   +.+.+|++..++.+...+.|-+|-||.-
T Consensus       176 Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfAS  225 (410)
T KOG1412|consen  176 PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFAS  225 (410)
T ss_pred             CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhccccc
Confidence            3  3444443 48999976   7788999999999999999999998865

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=97.70  E-value=7.4e-05  Score=71.11  Aligned_cols=150  Identities=15%  Similarity=0.118  Sum_probs=84.3

Q ss_pred             CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhc
Q psy10210        193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITG  271 (435)
Q Consensus       193 ~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~  271 (435)
                      +.-+++.+|+|+.+..++.++......  ..+--.|+...|.|+.|......+.-..-...-| ..+. +      .-++
T Consensus        66 gr~IV~GtGsTQL~~AalyALSp~~~~--~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~-~------~~~~  136 (363)
T PF04864_consen   66 GRYIVFGTGSTQLFNAALYALSPNASP--SSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNFK-N------SDNP  136 (363)
T ss_dssp             TSEEEEECHHHHHHHHHHHHHCHHT-T--TSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCGT-T-------S-C
T ss_pred             CcEEEEcCCHHHHHHHHHHhcCCCCCC--CCCCceeEecCCCccchHHHHHhccccCccccccHHhhc-c------CCCC
Confidence            347999999999999999998654111  0112258999999999998887775433333322 2221 1      1113


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCC-CCcc
Q psy10210        272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKY-GFTP  350 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~-~~~p  350 (435)
                      .+..=+++.||||.|.+.  +.+   ++.-+..+|.|-+|--   |.  ..     |+... ..=|++.++..|. |.++
T Consensus       137 ~~~IElVTSPNNPDG~lr--~~V---~~g~~~k~I~D~AYYW---Ph--yT-----pI~~~-aD~DiMLFT~SK~TGHAG  200 (363)
T PF04864_consen  137 SPYIELVTSPNNPDGQLR--EAV---LNGSSGKVIHDLAYYW---PH--YT-----PITAP-ADHDIMLFTLSKLTGHAG  200 (363)
T ss_dssp             CGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-S---TT--TS--------S--B--SEEEEEHHHHCS-GG
T ss_pred             CCeEEEEeCCCCCccccc--chh---cCCCCcceeeeeeeec---cc--cc-----ccCCC-CCCceEEEEEecccCccc
Confidence            456678899999999982  111   2334566799999832   21  11     22211 1238899998895 7778


Q ss_pred             CCcEEEEEeCCcccccc
Q psy10210        351 KGSSVVLYRDLKYKHCQ  367 (435)
Q Consensus       351 ~g~g~il~~~~~~~~~~  367 (435)
                      ...||.+++|++..+.+
T Consensus       201 SR~GWAlVKD~~Va~kM  217 (363)
T PF04864_consen  201 SRFGWALVKDEEVAKKM  217 (363)
T ss_dssp             G-EEEEEES-HHHHHHH
T ss_pred             cccceeeecCHHHHHHH
Confidence            88999999999876653

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG1405|consensus

Probab=97.40  E-value=0.0011  Score=63.15  Aligned_cols=141  Identities=14%  Similarity=0.139  Sum_probs=90.5

Q ss_pred             HHHHHHHhhc------CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC--CCCCC
Q psy10210        262 LAALQSAITG------NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY--PLPPF  329 (435)
Q Consensus       262 ~~~l~~~i~~------~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~--~~~~~  329 (435)
                      ++++|+.|.+      .+.++++...+..-|--    +.++.+.+++++|++.++|||++.|.-.     .|-  .+.-+
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGa-----TGk~WaHehw  329 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGA-----TGKFWAHEHW  329 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCc-----cCceeeehhc
Confidence            5666666642      24667777666655543    7799999999999999999999988632     121  11122


Q ss_pred             CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc-cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC-QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~-~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      +.. ..+|++++| .|+.     +|. .+-+++++-. .|.....|.|.-           +-. ..+-.+.+.+.++++
T Consensus       330 ~l~-~PpD~vTFS-KK~q-----~gG-ffh~~~frpn~pYrifNTWmGdP-----------~k~-lll~~vv~~I~~~~L  389 (484)
T KOG1405|consen  330 NLD-SPPDVVTFS-KKFQ-----TGG-FFHDEEFRPNEPYRIFNTWMGDP-----------SKN-LLLEEVVQEIKREDL  389 (484)
T ss_pred             CCC-CCccceehh-hhhh-----cCc-cccCcccCCCchHHHhhhhcCCh-----------HHH-HHHHHHHHHHhHHHH
Confidence            222 235888887 2332     122 4555666544 555667777641           112 245567788889999


Q ss_pred             HHHHHHHHHHHHHHHHhcC
Q psy10210        409 VWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l~  427 (435)
                      .+.+++....+...+.+|+
T Consensus       390 l~n~~~vG~~l~~gL~~Lq  408 (484)
T KOG1405|consen  390 LNNVAHVGKALLKGLLELQ  408 (484)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999888777666554

>KOG0630|consensus

Probab=96.52  E-value=0.021  Score=56.75  Aligned_cols=187  Identities=15%  Similarity=0.134  Sum_probs=115.8

Q ss_pred             CCeEEEeCCCchhH-HHHHHHcCCEEEEEec--C--C---CccccHHHHHHHhhc------CceEEEEeCCCCCcccccC
Q psy10210        225 LPEIVLPTTAHPAF-DKAANYFGMKVKHIRL--T--S---SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDD  290 (435)
Q Consensus       225 ~~~viv~~~~~~~~-~~~~~~~g~~v~~vp~--~--~---~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~  290 (435)
                      .|.++++...|.-. .-+++.+|+....|.+  +  .   .|++|...+++.|++      ++.+++..-+.+-.|..|.
T Consensus       231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm  310 (838)
T KOG0630|consen  231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM  310 (838)
T ss_pred             CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence            68899998888774 4567788985444422  2  2   358999999999874      3455556667777899999


Q ss_pred             HHHHHHHHHHcC-CcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210        291 IGAIAKLGEKYG-IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF  369 (435)
Q Consensus       291 i~~i~~la~~~~-~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~  369 (435)
                      +-+|.++|++++ .|+|.-.- +--.+.|.+...    .......-+|++++...-|++.|. .-+++...+---...  
T Consensus       311 i~kildi~eahakfWLHasGh-aiAALt~aepnn----il~HV~eqldSMal~ialWLGiPS-aPiV~LHRPleg~aa--  382 (838)
T KOG0630|consen  311 ILKILDICEAHAKFWLHASGH-AIAALTCAEPNN----ILGHVEEQLDSMALNIALWLGIPS-APIVLLHRPLEGSAA--  382 (838)
T ss_pred             HHHHHHHHHHhhheeEeeccc-hhhheeecCccc----chhHHHHHHhhccchhHHHhCCCC-CceEEeecccccccc--
Confidence            999999999996 99997642 212222322110    111112235999999999965554 445444433211110  


Q ss_pred             ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                        .     .+.+-.+ -++.-. ....|.+++++|...+.+++...-...+-+++.+..
T Consensus       383 --S-----afesdpi-~rekLd-aLp~Wta~q~LggKaIadmienAFll~kilfe~aSa  432 (838)
T KOG0630|consen  383 --S-----AFESDPI-LREKLD-ALPLWTALQALGGKAIADMIENAFLLCKILFEGASA  432 (838)
T ss_pred             --h-----hcccChH-HHHhhc-cchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhc
Confidence              0     0011111 112222 247899999999999999888776666666665443

>KOG2790|consensus

Probab=96.31  E-value=0.12  Score=48.26  Aligned_cols=172  Identities=17%  Similarity=0.126  Sum_probs=108.1

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK  248 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~  248 (435)
                      +....++..+....+.++++.++...+++. .|||.-+......+..   .+.|-..+-|+..+..--++.++.++-...
T Consensus        47 sk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~g---lK~g~~AdYiVTGsWS~KA~~EAkk~~~~~  123 (370)
T KOG2790|consen   47 SKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIG---LKHGRCADYVVTGSWSAKAAEEAKKYGTPN  123 (370)
T ss_pred             chhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhc---cccCCccceEEeccccHHHHHHHHhhCCce
Confidence            345566777777888999999887666555 5666655555444432   112223456888877777787777665554


Q ss_pred             EEEEecC-CC--ccccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        249 VKHIRLT-SS--YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       249 v~~vp~~-~~--~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .+..+.. -+  --+|.+.++.  +++...|+.|.-.+-+|+- +++.    +-.-.|.+++.|-.. .|+         
T Consensus       124 ~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSS-nfl---------  187 (370)
T KOG2790|consen  124 IVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSS-NFL---------  187 (370)
T ss_pred             EEeccccccccCcCCChhhccc--CCCccEEEEecCceeeceecCCCC----CCCCCCceEEEeccc-chh---------
Confidence            5444443 11  1245554442  3455688888777778875 3333    223357788888653 221         


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                       ..|+|+...|  .+.....|. .||.|.-++++|+.-+-
T Consensus       188 -SrpvDvsk~g--vi~aGAQKN-~G~aG~Tvvivr~dllg  223 (370)
T KOG2790|consen  188 -SRPVDVSKFG--VIFAGAQKN-VGPAGVTVVIVRKDLLG  223 (370)
T ss_pred             -cCCccchhcc--eEEeccccc-cCccccEEEEEehhhhc
Confidence             2378887765  577888999 68999999888876543

>PLN02672 methionine S-methyltransferase

Probab=89.65  E-value=22  Score=40.40  Aligned_cols=192  Identities=10%  Similarity=0.067  Sum_probs=107.8

Q ss_pred             HHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHH--HHHHHHHHHhCCCCCCCCCccccccc
Q psy10210         65 VFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLE--ILELVSNYLARGHYDWKHGRVSGAVY  142 (435)
Q Consensus        65 ~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~  142 (435)
                      ++..-.+.|..-+.|.+-++.-..++..++..     .|    -+.....+.  .+..+...+..      ...+.|.+.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  425 (1082)
T PLN02672        361 VYSCQLRQPNQVKTIFKFLKNGFHEVSGSLDL-----SF----EDESVADEKIPFLAYLASALKG------LSYFPCEPP  425 (1082)
T ss_pred             hhhhhhcCchHHHHHHHHHHccchhhhhhccc-----cc----cccccchhhccHHHHHHHHHcc------CCCCCCCCC
Confidence            44555566766565665554333333333222     11    111122222  36677776664      346667788


Q ss_pred             CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .|...+|..++..+..+.+. |+.+                          +++++.++-..|+..+++.+.-.-...  
T Consensus       426 ~~~~~~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--  476 (1082)
T PLN02672        426 AGSKRFRNLIAGFMRIYHHI-PLTP--------------------------DNVVVFPSRAVAIENALRLFSPRLAIV--  476 (1082)
T ss_pred             ccchHHHHHHHHHHHHhcCC-cCCc--------------------------cceEEeccHHHHHHHHHHhhChHHHhh--
Confidence            89999999999999887543 4433                          388999999999988887653221100  


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcC----------CEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFG----------MKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDI  291 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g----------~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i  291 (435)
                         + --++..-+.-|..+....|          +.|++-|-.      -+.+.+.+++ ++.+|+..-..+.--+..-+
T Consensus       477 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  546 (1082)
T PLN02672        477 ---D-EHLTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPRQ------SDLVIELIKKLKPQVVVTGMADFEMRTSTAF  546 (1082)
T ss_pred             ---h-hhhhccCCHHHHhHhhhhcccccCccCCeEEEEeCCCc------chHHHHHHHhCCCeEEEEeccchhhhhHHHH
Confidence               0 0011122233444333332          122222321      1245555554 56677765444433333568


Q ss_pred             HHHHHHHHHcCCcEEEecc
Q psy10210        292 GAIAKLGEKYGIPVHVDCC  310 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~  310 (435)
                      +.|.+.+++.|++++.|..
T Consensus       547 ~~~~~~~~~~~~~~~~~~~  565 (1082)
T PLN02672        547 EHLLNVTAEIGARLFLDIS  565 (1082)
T ss_pred             HHHHHHHHhhCcEEEEehh
Confidence            8899999999999999974

>TIGR03573 WbuX N-acetyl sugar amidotransferase

Probab=87.35  E-value=12  Score=36.85  Aligned_cols=103  Identities=14%  Similarity=0.133  Sum_probs=60.4

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCch------hHHHHHHHcCCEEEEEecCCCccccHHHHHH
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHP------AFDKAANYFGMKVKHIRLTSSYTVDLAALQS  267 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~------~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~  267 (435)
                      ++++-.|||-.|..++..+....+..      +..+.-++.+.      ...+.++.+|+....+.++      .+.+.+
T Consensus        61 D~iV~lSGGkDSs~la~ll~~~~gl~------~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d------~~~~~~  128 (343)
T TIGR03573        61 DCIIGVSGGKDSTYQAHVLKKKLGLN------PLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITIN------PETFRK  128 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHHHHhCCc------eEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCC------HHHHHH
Confidence            48899999999998875443333322      33345555543      2556667789888887754      333332


Q ss_pred             HhhcCceEEEEeCCCCCcccc--cCHHHHHHHHHHcCCcEEEeccccc
Q psy10210        268 AITGNTVMLVGSMPNFPYGTM--DDIGAIAKLGEKYGIPVHVDCCLGG  313 (435)
Q Consensus       268 ~i~~~~~~v~~~~p~nptG~~--~~i~~i~~la~~~~~~livD~~~~~  313 (435)
                      .......     ...+|....  .....+.++|+++|+.+++.+-.++
T Consensus       129 l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~~d  171 (343)
T TIGR03573       129 LQRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGENIA  171 (343)
T ss_pred             HHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence            2221111     112222222  3457788999999999998765544

This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an

>KOG1465|consensus

Probab=80.40  E-value=55  Score=31.23  Aligned_cols=103  Identities=16%  Similarity=0.215  Sum_probs=64.0

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC--CCchhHHHHHH--HcCCEEEEEecCCCccccHHHHHHHh
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT--TAHPAFDKAAN--YFGMKVKHIRLTSSYTVDLAALQSAI  269 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~--~~~~~~~~~~~--~~g~~v~~vp~~~~~~~d~~~l~~~i  269 (435)
                      .++++|.|.+..+..-++.+.+.+++      -.|++.+  |.+.+...+..  ..|++...+|       | .++-..+
T Consensus       163 nEviLT~g~SrTV~~FL~~A~kk~Rk------f~viVaE~~p~~qgH~~Ak~la~~giettVI~-------d-aaVfA~M  228 (353)
T KOG1465|consen  163 NEVILTLGSSRTVENFLKHAAKKGRK------FRVIVAEGAPNNQGHELAKPLAQAGIETTVIP-------D-AAVFAMM  228 (353)
T ss_pred             CceEEecCccHHHHHHHHHHHhccCc------eEEEEeecCCcccchHhhHHHHHcCCeeEEec-------c-HHHHHHh
Confidence            37999999888888777776654432      3466654  33333333322  4477776666       1 2334444


Q ss_pred             hcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210        270 TGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCC  310 (435)
Q Consensus       270 ~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~  310 (435)
                      .+-.+.|+.++.-.+.|.+   .-...++..|++|.++++|=+-
T Consensus       229 srVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp  272 (353)
T KOG1465|consen  229 SRVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP  272 (353)
T ss_pred             hhcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence            4444566666555555555   4567888999999999998543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	435
3maf_B	518	Crystal Structure Of Stspl (Asymmetric Form) Length		6e-83
3mbb_A	514	Crystal Structure Of Stspl - Apo Form, After Treatm		2e-82
3maf_A	518	Crystal Structure Of Stspl (Asymmetric Form) Length		3e-82
3mau_A	514	Crystal Structure Of Stspl In Complex With Phosphoe		3e-82
3mad_A	514	Crystal Structure Of Stspl (Symmetric Form) Length		3e-82
3mc6_C	497	Crystal Structure Of Scdpl1 Length = 497		1e-79
3mc6_A	497	Crystal Structure Of Scdpl1 Length = 497		7e-79
3f9t_A	397	Crystal Structure Of L-tyrosine Decarboxylase Mfna		1e-23
3hbx_A	502	Crystal Structure Of Gad1 From Arabidopsis Thaliana		4e-18
1pmm_A	466	Crystal Structure Of Escherichia Coli Gadb (Low Ph)		8e-10
1xey_A	466	Crystal Structure Of The Complex Of Escherichia Col		9e-10
2dgk_A	452	Crystal Structure Of An N-terminal Deletion Mutant		1e-09
2qma_A	497	Crystal Structure Of Glutamate Decarboxylase Domain		4e-05
2jis_A	515	Human Cysteine Sulfinic Acid Decarboxylase (Csad) I		5e-05
2okk_A	497	The X-Ray Crystal Structure Of The 65kda Isoform Of		3e-04

>pdb|3MAF|B Chain B, Crystal Structure Of Stspl (Asymmetric Form) Length = 518

Iteration: 1
 Score =  304 bits (779), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 195/320 (60%), Gaps = 3/320 (0%)
Query: 90  FQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLV 149
            +  IK           LP  G  R EIL  ++   A     W+ G  SGAVY+  +  +
Sbjct: 58  LRSQIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHI 117
Query: 150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG---GPETCGCMTSGGTESI 206
             L EV+ L S +NPLHPD++P   K EAEV+ M A M  G   G   CG +TSGGTES+
Sbjct: 118 AFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 177
Query: 207 MMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266
           ++A K YRD+AR  KGI+ PE V+P +AH AFDKAA YFG+K+    L + Y  D+AA++
Sbjct: 178 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMR 237
Query: 267 SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326
            AIT NTV++ GS P +P+G +D I  IA L  ++GI  HVD CLGGF+ P+    GYP+
Sbjct: 238 EAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV 297
Query: 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYXXXXXXX 386
           PPFDF L GVTS+S DTHKYG+  KG+SV+LYR     H QYF+ +DWPGG Y       
Sbjct: 298 PPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAG 357
Query: 387 XXXXXIIATCWAAMMYFGFE 406
                + AT WAAM+  G E
Sbjct: 358 SRPGALSATAWAAMLSLGEE 377

>pdb|3MBB|A Chain A, Crystal Structure Of Stspl - Apo Form, After Treatment With Semicarbazide Length = 514

Iteration: 1
 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 194/320 (60%), Gaps = 3/320 (0%)
Query: 90  FQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLV 149
            +  IK           LP  G  R EIL  ++   A     W+ G  SGAVY+  +  +
Sbjct: 54  LRSQIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHI 113
Query: 150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG---GPETCGCMTSGGTESI 206
             L EV+ L S +NPLHPD++P   K EAEV+ M A M  G   G   CG +TSGGTES+
Sbjct: 114 AFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 173
Query: 207 MMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266
           ++A K YRD+AR  KGI+ PE V+P +AH AFDKAA YFG+K+    L + Y  D+AA++
Sbjct: 174 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMR 233
Query: 267 SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326
            AIT NTV++ GS P  P+G +D I  IA L  ++GI  HVD CLGGF+ P+    GYP+
Sbjct: 234 EAITPNTVVVAGSAPGXPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV 293
Query: 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYXXXXXXX 386
           PPFDF L GVTS+S DTHKYG+  KG+SV+LYR     H QYF+ +DWPGG Y       
Sbjct: 294 PPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAG 353
Query: 387 XXXXXIIATCWAAMMYFGFE 406
                + AT WAAM+  G E
Sbjct: 354 SRPGALSATAWAAMLSLGEE 373

>pdb|3MAF|A Chain A, Crystal Structure Of Stspl (Asymmetric Form) Length = 518

Iteration: 1
 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 194/320 (60%), Gaps = 3/320 (0%)
Query: 90  FQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLV 149
            +  IK           LP  G  R EIL  ++   A     W+ G  SGAVY+  +  +
Sbjct: 58  LRSQIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHI 117
Query: 150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG---GPETCGCMTSGGTESI 206
             L EV+ L S +NPLHPD++P   K EAEV+ M A M  G   G   CG +TSGGTES+
Sbjct: 118 AFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 177
Query: 207 MMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266
           ++A K YRD+AR  KGI+ PE V+P +AH AFDKAA YFG+K+    L + Y  D+AA++
Sbjct: 178 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMR 237
Query: 267 SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326
            AIT NTV++ GS P +P+G +D I  IA L  ++GI  HVD CLGGF+ P+    GYP+
Sbjct: 238 EAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV 297
Query: 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYXXXXXXX 386
           PPFDF L GVTS+S DTH YG+  KG+SV+LYR     H QYF+ +DWPGG Y       
Sbjct: 298 PPFDFRLEGVTSVSADTHXYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAG 357
Query: 387 XXXXXIIATCWAAMMYFGFE 406
                + AT WAAM+  G E
Sbjct: 358 SRPGALSATAWAAMLSLGEE 377

>pdb|3MAU|A Chain A, Crystal Structure Of Stspl In Complex With Phosphoethanolamine Length = 514

Iteration: 1
 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 194/320 (60%), Gaps = 3/320 (0%)
Query: 90  FQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLV 149
            +  IK           LP  G  R EIL  ++   A     W+ G  SGAVY+  +  +
Sbjct: 54  LRSQIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHI 113
Query: 150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG---GPETCGCMTSGGTESI 206
             L EV+ L S +NPLHPD++P   K EAEV+ M A M  G   G   CG +TSGGTES+
Sbjct: 114 AFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 173
Query: 207 MMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266
           ++A K YRD+AR  KGI+ PE V+P +AH AFDKAA YFG+K+    L + Y  D+AA++
Sbjct: 174 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMR 233
Query: 267 SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326
            AIT NTV++ GS P +P+G +D I  IA L  ++GI  HVD CLGGF+ P+    GYP+
Sbjct: 234 EAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV 293
Query: 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYXXXXXXX 386
           PPFDF L GVTS+S DTH YG+  KG+SV+LYR     H QYF+ +DWPGG Y       
Sbjct: 294 PPFDFRLEGVTSVSADTHAYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAG 353
Query: 387 XXXXXIIATCWAAMMYFGFE 406
                + AT WAAM+  G E
Sbjct: 354 SRPGALSATAWAAMLSLGEE 373

>pdb|3MAD|A Chain A, Crystal Structure Of Stspl (Symmetric Form) Length = 514

Iteration: 1
 Score =  301 bits (772), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 194/320 (60%), Gaps = 3/320 (0%)
Query: 90  FQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLV 149
            +  IK           LP  G  R EIL  ++   A     W+ G  SGAVY+  +  +
Sbjct: 54  LRSQIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHI 113
Query: 150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG---GPETCGCMTSGGTESI 206
             L EV+ L S +NPLHPD++P   K EAEV+ M A M  G   G   CG +TSGGTES+
Sbjct: 114 AFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 173
Query: 207 MMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266
           ++A K YRD+AR  KGI+ PE V+P +AH AFDKAA YFG+K+    L + Y  D+AA++
Sbjct: 174 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMR 233
Query: 267 SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326
            AIT NTV++ GS P +P+G +D I  IA L  ++GI  HVD CLGGF+ P+    GYP+
Sbjct: 234 EAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV 293
Query: 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYXXXXXXX 386
           PPFDF L GVTS+S DTH YG+  KG+SV+LYR     H QYF+ +DWPGG Y       
Sbjct: 294 PPFDFRLEGVTSVSADTHXYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAG 353
Query: 387 XXXXXIIATCWAAMMYFGFE 406
                + AT WAAM+  G E
Sbjct: 354 SRPGALSATAWAAMLSLGEE 373

>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1 Length = 497

Iteration: 1
 Score =  293 bits (750), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/366 (43%), Positives = 222/366 (60%), Gaps = 10/366 (2%)
Query: 73  PAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVS--NYLARGHY 130
           P +R  +E+E  KV +  +D++ ++++ L  F +LPS G  + +++E ++  N L   H 
Sbjct: 4   PFLRGTVEKEVTKVKQSIEDELIRSDSQLMNFPQLPSNGIPQDDVIEELNKLNDLIP-HT 62
Query: 131 DWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG 190
            WK G+VSGAVY+   DL+ L T  +      N LHPD+FP V KME+EV+ M  RMFN 
Sbjct: 63  QWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNA 122
Query: 191 GPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV 249
             +T    T+ G  ES+++AC + + YA   +GI+ PEI+ P TAH  FDKAA YFGMK+
Sbjct: 123 PSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKL 182
Query: 250 KHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVD 308
           +H+ L  ++Y VDL  ++  I  NTV+LVGS PNFP+G  DDI  + K+ +KY +P+HVD
Sbjct: 183 RHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVD 242
Query: 309 CCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ 367
            CLG F+  FM  AGY  LP  DF +PGVTSIS DTHKYGF PKGSSV++YR+   +  Q
Sbjct: 243 SCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQ 302
Query: 368 YFVTSDWPGGNYXXXXXXXXXXXXIIATCWAAMMYFGFEAQVWIC---VRYHFNYKSCLQ 424
           Y+V   W GG Y            I+  CWA M+  G    +  C   V     +K  +Q
Sbjct: 303 YYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQ 362
Query: 425 -NLSDL 429
            N+ DL
Sbjct: 363 ENIPDL 368

>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1 Length = 497

Iteration: 1
 Score =  291 bits (744), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 159/366 (43%), Positives = 221/366 (60%), Gaps = 10/366 (2%)
Query: 73  PAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVS--NYLARGHY 130
           P +R  +E+E  KV +  +D++ ++++ L  F +LPS G  + +++E ++  N L   H 
Sbjct: 4   PFLRGTVEKEVTKVKQSIEDELIRSDSQLMNFPQLPSNGIPQDDVIEELNKLNDLIP-HT 62
Query: 131 DWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG 190
            WK G+VSGAVY+   DL+ L T  +      N LHPD+FP V KME+EV+ M  RMFN 
Sbjct: 63  QWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNA 122
Query: 191 GPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV 249
             +T    T+ G  ES+++AC + + YA   +GI+ PEI+ P TAH  FDKAA YFGMK+
Sbjct: 123 PSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKL 182
Query: 250 KHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVD 308
           +H+ L  ++Y VDL  ++  I  NTV+LVGS PNFP+G  DDI  + K+ +KY +P+HVD
Sbjct: 183 RHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVD 242
Query: 309 CCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ 367
            CLG F+  FM  AGY  LP  DF +PGVTSIS DTH YGF PKGSSV++YR+   +  Q
Sbjct: 243 SCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHXYGFAPKGSSVIMYRNSDLRMHQ 302
Query: 368 YFVTSDWPGGNYXXXXXXXXXXXXIIATCWAAMMYFGFEAQVWIC---VRYHFNYKSCLQ 424
           Y+V   W GG Y            I+  CWA M+  G    +  C   V     +K  +Q
Sbjct: 303 YYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQ 362
Query: 425 -NLSDL 429
            N+ DL
Sbjct: 363 ENIPDL 368

>pdb|3F9T|A Chain A, Crystal Structure Of L-tyrosine Decarboxylase Mfna (ec 4.1.1.25) (np_247014.1) From Methanococcus Jannaschii At 2.11 A Resolution Length = 397

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 155/341 (45%), Gaps = 42/341 (12%)
Query: 109 SQGRNRLEILELVSNYLARGHYDWKHGRVSGA----VYYYQQDLVDLLTEVFGLTSYTNP 164
            +G +  EILE +  Y +     ++ G + G+    V    + +VD+  E       TN 
Sbjct: 7   EKGVSEKEILEELKKYRSL-DLKYEDGNIFGSXCSNVLPITRKIVDIFLE-------TNL 58
Query: 165 LHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE--KG 222
             P +F G   +E + + +   + N   +  G + SGGTE+ + A +  ++  RE+  KG
Sbjct: 59  GDPGLFKGTKLLEEKAVALLGSLLNN-KDAYGHIVSGGTEANLXALRCIKNIWREKRRKG 117
Query: 223 ISL---PEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV-MLVG 278
           +S    P+I++P TAH +F+K      ++  +  +   YT+D   ++ A+    V  ++G
Sbjct: 118 LSKNEHPKIIVPITAHFSFEKGREXXDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIG 177
Query: 279 SMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMS------AAGYPLPPFDFS 332
                  GT+D+I  ++K+ ++  I +HVD   GG + PF+          Y    FDFS
Sbjct: 178 IAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNY---KFDFS 234
Query: 333 LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYXXXXXXXXXXXXI 392
           L GV SI++D HK G  P  S  +L++D+ YK    ++  D P                 
Sbjct: 235 L-GVDSITIDPHKXGHCPIPSGGILFKDIGYKR---YLDVDAPYLTETRQATILGTRVGF 290
Query: 393 IATC-WAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLY 432
              C +A + Y G E Q  I          C +N   L+LY
Sbjct: 291 GGACTYAVLRYLGREGQRKIV-------NECXENT--LYLY 322

>pdb|3HBX|A Chain A, Crystal Structure Of Gad1 From Arabidopsis Thaliana Length = 502

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 168 DIFPGVCKMEAEVIKMCARMFNGGPE----TCGCMTSGGTESIMMACKAYR-----DYAR 218
           D +P   +++   + M A +FN   E      G  T G +E+IM+A  A++         
Sbjct: 88  DEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147
Query: 219 EEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV-DLAALQSAITGNTVMLV 277
           E K +  P IV        ++K A YF +++K ++L+  Y V D       +  NT+ + 
Sbjct: 148 EGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVA 207
Query: 278 GSMPNFPYGTMDDIGAIAKL-GEK-----YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF 331
             + +   G  +D+  +  L  EK     +  P+HVD   GGF+APF+    YP   +DF
Sbjct: 208 AILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDF 263
Query: 332 SLPGVTSISVDTHKYGFTPKGSSVVLYRD 360
            LP V SI+V  H YG    G   V++R+
Sbjct: 264 RLPLVKSINVSGHXYGLVYAGIGWVIWRN 292

>pdb|1PMM|A Chain A, Crystal Structure Of Escherichia Coli Gadb (Low Ph) Length = 466

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 154 EVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG----GPETCGCMTSGGTESIMMA 209
           ++  L+   N +  + +P    ++   + M A +++       +  G  T G +E+ M+ 
Sbjct: 74  KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLG 133
Query: 210 CKA--YRDYAREE---KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT-VDLA 263
             A  +R   R E   K    P +V        + K A Y+ ++++ I +      +D  
Sbjct: 134 GMAMKWRWRKRMEAAGKPTDKPNLVC-GPVQICWHKFARYWDVELREIPMRPGQLFMDPK 192
Query: 264 ALQSAITGNTVMLVGSMP-------NFPYGTMDDIGAIAKLGEKYGIPV--HVDCCLGGF 314
            +  A   NT+ +V +          FP    D   A+ K     GI +  H+D   GGF
Sbjct: 193 RMIEACDENTIGVVPTFGVTYTGNYEFPQPLHD---ALDKFQADTGIDIDMHIDAASGGF 249
Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
           LAPF++    P   +DF LP V SIS   HK+G  P G   V++RD +    +     D+
Sbjct: 250 LAPFVA----PDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDY 305
Query: 375 PGGN 378
            GG 
Sbjct: 306 LGGQ 309

>pdb|1XEY|A Chain A, Crystal Structure Of The Complex Of Escherichia Coli Gada With Glutarate At 2.05 A Resolution Length = 466

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 154 EVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG----GPETCGCMTSGGTESIMMA 209
           ++  L+   N +  + +P    ++   + M A +++       +  G  T G +E+ M+ 
Sbjct: 74  KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLG 133
Query: 210 CKA--YRDYAREE---KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLA 263
             A  +R   R E   K    P +V        + K A Y+ ++++ I +      +D  
Sbjct: 134 GMAMKWRWRKRMEAAGKPTDKPNLVC-GPVQICWHKFARYWDVELREIPMRPGQLFMDPK 192
Query: 264 ALQSAITGNTVMLVGSMP-------NFPYGTMDDIGAIAKLGEKYGIPV--HVDCCLGGF 314
            +  A   NT+ +V +          FP    D   A+ K     GI +  H+D   GGF
Sbjct: 193 RMIEACDENTIGVVPTFGVTYTGNYEFPQPLHD---ALDKFQADTGIDIDMHIDAASGGF 249
Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
           LAPF++    P   +DF LP V SIS   HK+G  P G   V++RD +    +     D+
Sbjct: 250 LAPFVA----PDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDY 305
Query: 375 PGGN 378
            GG 
Sbjct: 306 LGGQ 309

>pdb|2DGK|A Chain A, Crystal Structure Of An N-terminal Deletion Mutant Of Escherichia Coli Gadb In An Autoinhibited State (aldamine) Length = 452

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 154 EVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG----GPETCGCMTSGGTESIMMA 209
           ++  L+   N +  + +P    ++   + M A +++       +  G  T G +E+ M+ 
Sbjct: 60  KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLG 119
Query: 210 CKA--YRDYAREE---KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT-VDLA 263
             A  +R   R E   K    P +V        + K A Y+ ++++ I +      +D  
Sbjct: 120 GMAMKWRWRKRMEAAGKPTDKPNLVC-GPVQICWHKFARYWDVELREIPMRPGQLFMDPK 178
Query: 264 ALQSAITGNTVMLVGSMP-------NFPYGTMDDIGAIAKLGEKYGIPV--HVDCCLGGF 314
            +  A   NT+ +V +          FP    D   A+ K     GI +  H+D   GGF
Sbjct: 179 RMIEACDENTIGVVPTFGVTYTGNYEFPQPLHD---ALDKFQADTGIDIDMHIDAASGGF 235
Query: 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374
           LAPF++    P   +DF LP V SIS   HK+G  P G   V++RD +    +     D+
Sbjct: 236 LAPFVA----PDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDY 291
Query: 375 PGGN 378
            GG 
Sbjct: 292 LGGQ 295

>pdb|2QMA|A Chain A, Crystal Structure Of Glutamate Decarboxylase Domain Of Diaminobutyrate-Pyruvate Transaminase And L-2,4-Diaminobutyrate Decarboxylase From Vibrio Parahaemolyticus Length = 497

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 33/209 (15%)
Query: 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE------KGISLPE-- 227
           +E +V+      ++   +  G  TSGGT+S        RD+  ++      + + LP+  
Sbjct: 141 VEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQXGLXLARDWIADKLSGHSIQKLGLPDYA 200
Query: 228 ----IVLPTTAHPAFDKAANYFGM---KVKHIRLTSSYTVDLAALQSAITGNTV------ 274
               IV    +H    K+A++ G+    V  +   +  T D+  L   I           
Sbjct: 201 DKLRIVCSKKSHFTVQKSASWXGLGEKAVXTVDANADGTXDITKLDEVIAQAKAEGLIPF 260
Query: 275 MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334
            +VG+     +G +DD+  IA    K+    HVD   GG L          L      L 
Sbjct: 261 AIVGTAGTTDHGAIDDLDFIADXAVKHDXWXHVDGAYGGALI---------LSSHKSRLK 311
Query: 335 GVT---SISVDTHKYGFTPKGSSVVLYRD 360
           GV    SISVD HK  +       +L  D
Sbjct: 312 GVERAHSISVDFHKLFYQTISCGALLVND 340

>pdb|2JIS|A Chain A, Human Cysteine Sulfinic Acid Decarboxylase (Csad) In Complex With Plp. Length = 515

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 48/239 (20%)
Query: 105 LELPSQGRNRLEILE----LVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTS 160
           LEL SQG ++ +ILE    ++   +  GH  + +   SG   +     +  +TE    + 
Sbjct: 80  LELRSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRI--ITESLNTSQ 137
Query: 161 YTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR-- 218
           YT     +I P    ME EV++   R   G     G    GG+ S M A    R Y R  
Sbjct: 138 YTY----EIAPVFVLMEEEVLRKL-RALVGWSSGDGIFCPGGSISNMYAVNLAR-YQRYP 191
Query: 219 --EEKGI-SLPEIVLPTT--AHPAFDKAANYFGMKVKHIRLTSS------------YTVD 261
             +++G+ +LP + L T+   H +  K A + G+    +R+  +              + 
Sbjct: 192 DCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIG 251
Query: 262 LAA-------LQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG 313
           +A        L SA +G TV+          G  D + AIA + +++G+ +HVD   GG
Sbjct: 252 MAEAEGAVPFLVSATSGTTVL----------GAFDPLEAIADVCQRHGLWLHVDAAWGG 300

>pdb|2OKK|A Chain A, The X-Ray Crystal Structure Of The 65kda Isoform Of Glutamic Acid Decarboxylase (Gad65) Length = 497

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 107/283 (37%), Gaps = 39/283 (13%)
Query: 102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQ-----DLVDLLTEVF 156
           EY  EL  Q +N  EIL      L       K+   +G   Y+ Q     D+V L  +  
Sbjct: 57  EYNWELADQPQNLEEILMHCQTTL-------KYAIKTGHPRYFNQLSTGLDMVGLAADWL 109
Query: 157 GLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN-GGPETCGCMTSGGTESIMMACKAYR- 214
             T+ TN    +I P    +E   +K    +    G    G  + GG  S M A    R 
Sbjct: 110 TSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWPGGSGDGIFSPGGAISNMYAMMIARF 169
Query: 215 ---DYAREEKGISLPEIVLPTTAHPAFD--KAANYFGMKVKHIRLTSS--------YTVD 261
                 +E+   +LP ++  T+ H  F   K A   G+    + L             ++
Sbjct: 170 KMFPEVKEKGMAALPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCDERGKMIPSDLE 229
Query: 262 LAALQSAITGNTVMLVGSMPNFP-YGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMS 320
              L++   G    LV +      YG  D + A+A + +KY I +HVD   GG L   MS
Sbjct: 230 RRILEAKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGL--LMS 287
Query: 321 AAGYPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRD 360
                     + L GV    S++ + H     P   S +L R+
Sbjct: 288 RK------HKWKLSGVERANSVTWNPHXMMGVPLQCSALLVRE 324

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	435
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	1e-142
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	1e-140
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	1e-131
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	1e-106
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	1e-105
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	1e-88
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	9e-28
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	1e-26
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	7e-26
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	9e-25
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	5e-24
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	3e-23
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	1e-22
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	2e-22
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	5e-09
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	1e-08
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	2e-08
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	2e-08
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	2e-08
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	4e-07
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	2e-06
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	2e-06
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	3e-06
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	4e-06
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	5e-06
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	8e-06
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	1e-05
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	2e-05
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	3e-05
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	5e-05
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	7e-05
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	7e-05
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	7e-05
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	8e-05
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	1e-04
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	1e-04
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	1e-04
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-04
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	2e-04
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	2e-04
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	2e-04
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	3e-04
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	3e-04
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	3e-04
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	4e-04
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	9e-04
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	9e-04

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A* Length = 514

 Score =  414 bits (1065), Expect = e-142
 Identities = 160/352 (45%), Positives = 213/352 (60%), Gaps = 7/352 (1%)

Query: 58  TGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEI 117
           + +    +  +  + PA R    +    +    +  IK           LP  G  R EI
Sbjct: 26  SLQDYCEIRGIQSQPPARRDPTMDWLASL----RSQIKPYRDRFPSHARLPRAGLPRAEI 81

Query: 118 LELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME 177
           L  ++   A     W+ G  SGAVY+  +  +  L EV+ L S +NPLHPD++P   K E
Sbjct: 82  LAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFE 141

Query: 178 AEVIKMCARMFNG---GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA 234
           AEV+ M A M  G   G   CG +TSGGTES+++A K YRD+AR  KGI+ PE V+P +A
Sbjct: 142 AEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSA 201

Query: 235 HPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAI 294
           H AFDKAA YFG+K+    L + Y  D+AA++ AIT NTV++ GS P +P+G +D I  I
Sbjct: 202 HAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEI 261

Query: 295 AKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSS 354
           A L  ++GI  HVD CLGGF+ P+    GYP+PPFDF L GVTS+S DTHKYG+  KG+S
Sbjct: 262 AALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTS 321

Query: 355 VVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406
           V+LYR     H QYF+ +DWPGG Y SP+ +GSR G + AT WAAM+  G E
Sbjct: 322 VILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE 373

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae} Length = 497

 Score =  410 bits (1054), Expect = e-140
 Identities = 163/340 (47%), Positives = 222/340 (65%), Gaps = 4/340 (1%)

Query: 71  KIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYL-ARGH 129
             P +R  +E+E  KV +  +D++ ++++ L  F +LPS G  + +++E ++       H
Sbjct: 2   GSPFLRGTVEKEVTKVKQSIEDELIRSDSQLMNFPQLPSNGIPQDDVIEELNKLNDLIPH 61

Query: 130 YDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN 189
             WK G+VSGAVY+   DL+ L T  +      N LHPD+FP V KME+EV+ M  RMFN
Sbjct: 62  TQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFN 121

Query: 190 GGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK 248
              +T CG  TSGGTES+++AC + + YA   +GI+ PEI+ P TAH  FDKAA YFGMK
Sbjct: 122 APSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMK 181

Query: 249 VKHIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307
           ++H+ L   +Y VDL  ++  I  NTV+LVGS PNFP+G  DDI  + K+ +KY +P+HV
Sbjct: 182 LRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHV 241

Query: 308 DCCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366
           D CLG F+  FM  AGY  LP  DF +PGVTSIS DTHKYGF PKGSSV++YR+   +  
Sbjct: 242 DSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMH 301

Query: 367 QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406
           QY+V   W GG YGSP+++GSR G I+  CWA M+  G  
Sbjct: 302 QYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGEN 341

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii} Length = 397

 Score =  384 bits (987), Expect = e-131
 Identities = 79/309 (25%), Positives = 145/309 (46%), Gaps = 17/309 (5%)

Query: 107 LPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLH 166
           +  +G +  EILE +  Y +     ++ G + G++      ++ +  ++  +   TN   
Sbjct: 5   MQEKGVSEKEILEELKKYRSL-DLKYEDGNIFGSMCSN---VLPITRKIVDIFLETNLGD 60

Query: 167 PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE-----K 221
           P +F G   +E + + +   + N   +  G + SGGTE+ +MA +  ++  RE+      
Sbjct: 61  PGLFKGTKLLEEKAVALLGSLLNN-KDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS 119

Query: 222 GISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV-MLVGSM 280
               P+I++P TAH +F+K      ++  +  +   YT+D   ++ A+    V  ++G  
Sbjct: 120 KNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIA 179

Query: 281 PNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL---PPFDFSLPGVT 337
                GT+D+I  ++K+ ++  I +HVD   GG + PF+            FDFSL GV 
Sbjct: 180 GTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVD 238

Query: 338 SISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCW 397
           SI++D HK G  P  S  +L++D+ YK                  ++ G+R G   A  +
Sbjct: 239 SITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTET--RQATILGTRVGFGGACTY 296

Query: 398 AAMMYFGFE 406
           A + Y G E
Sbjct: 297 AVLRYLGRE 305

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana} Length = 502

 Score =  322 bits (827), Expect = e-106
 Identities = 66/326 (20%), Positives = 137/326 (42%), Gaps = 25/326 (7%)

Query: 105 LELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNP 164
            ++P     +    +++++ L     + +    S    +    +     ++   +   N 
Sbjct: 30  FKMPENSIPKEAAYQIINDELMLDG-NPRLNLASFVTTW----MEPECDKLIMSSINKNY 84

Query: 165 LHPDIFPGVCKMEAEVIKMCARMFNG----GPETCGCMTSGGTESIMMACKAYRDYAREE 220
           +  D +P   +++   + M A +FN          G  T G +E+IM+A  A++   + +
Sbjct: 85  VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144

Query: 221 -----KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTV 274
                K +  P IV        ++K A YF +++K ++L+   Y +D       +  NT+
Sbjct: 145 RKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTI 204

Query: 275 MLVGSMPNFPYGTMDDIGAIAKLGEKYG------IPVHVDCCLGGFLAPFMSAAGYPLPP 328
            +   + +   G  +D+  +  L  +         P+HVD   GGF+APF+    YP   
Sbjct: 205 CVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFL----YPELE 260

Query: 329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSR 388
           +DF LP V SI+V  HKYG    G   V++R+ +    +     ++ G +  + +++ S+
Sbjct: 261 WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSK 320

Query: 389 SGGIIATCWAAMMYFGFEAQVWICVR 414
               +   +  ++  G E    +   
Sbjct: 321 GSSQVIAQYYQLIRLGHEGYRNVMEN 346

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A* Length = 452

 Score =  318 bits (817), Expect = e-105
 Identities = 61/316 (19%), Positives = 125/316 (39%), Gaps = 24/316 (7%)

Query: 106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPL 165
             P          +++++ L     + +    +    +      + + ++  L+   N +
Sbjct: 17  RFPLHEMRDDVAFQIINDELYL-DGNARQNLATFCQTWDD----ENVHKLMDLSINKNWI 71

Query: 166 HPDIFPGVCKMEAEVIKMCARMFNG----GPETCGCMTSGGTESIMMACKAYRDYARE-- 219
             + +P    ++   + M A +++       +  G  T G +E+ M+   A +   R+  
Sbjct: 72  DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131

Query: 220 --EKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVML 276
                 +    ++       + K A Y+ ++++ I +      +D   +  A   NT+ +
Sbjct: 132 EAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGV 191

Query: 277 VGSMPNFPYGTMDDIGAIAKLGEK------YGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330
           V +      G  +    +    +K        I +H+D   GGFLAPF+     P   +D
Sbjct: 192 VPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFV----APDIVWD 247

Query: 331 FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSG 390
           F LP V SIS   HK+G  P G   V++RD +    +     D+ GG  G+ +++ SR  
Sbjct: 248 FRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPA 307

Query: 391 GIIATCWAAMMYFGFE 406
           G +   +   +  G E
Sbjct: 308 GQVIAQYYEFLRLGRE 323

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9 Length = 456

 Score =  275 bits (705), Expect = 1e-88
 Identities = 55/349 (15%), Positives = 113/349 (32%), Gaps = 45/349 (12%)

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           +   + +   K  +L  ++  +    +    ++P  G +  +I   +             
Sbjct: 26  IEGLIPKNMEKRGELVLNEYLKEIEDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPK 85

Query: 135 --------GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCAR 186
                    R    ++   ++L        G +       P    G   M A   K+   
Sbjct: 86  SVRIGEREARTYSKIH---EELSSGFCHGIGRSGNLVDPQPKA-SGASIMYALTNKILES 141

Query: 187 MFNG-GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF 245
            F   G       T   T   +  C +               ++ P  +H +  KA ++ 
Sbjct: 142 FFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSN-----VVIYPYASHKSPIKAVSFV 196

Query: 246 GMKVKHIRL---TSSYTVDLAALQSAIT-----GNTVMLVGSMPNFPYGTMDDIGAIAKL 297
           GM ++ +          V +  +++AI      GN   ++ ++  FP    DDI  IAK+
Sbjct: 197 GMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKI 256

Query: 298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL 357
            E Y IP  ++         ++         F + +  V S    + K   TP G  +V 
Sbjct: 257 CENYDIPHIINGAYAIQNNYYL---EKLKKAFKYRVDAVVS---SSDKNLLTPIGGGLVY 310

Query: 358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406
             D ++      ++  +PG    +P V+             +++  G +
Sbjct: 311 STDAEFIK---EISLSYPGRASATPVVN----------TLVSLLSMGSK 346

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus} Length = 497

 Score =  113 bits (286), Expect = 9e-28
 Identities = 60/351 (17%), Positives = 112/351 (31%), Gaps = 65/351 (18%)

Query: 44  ESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEET-GKVAKLFQDDIKQNNAGLE 102
           +         +      +      +      V           +                
Sbjct: 21  KHFIHTGELGSAEFASVMSHTTSAMKSVFEQVNAPYSGMDPKALEDAINA---------- 70

Query: 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGR----VSGAVYYYQQDLVDLLTEVFG- 157
             ++L ++      +++ V+  +A+     +H      +            + +      
Sbjct: 71  --VDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAV-AAEAMIAALNQ 127

Query: 158 -LTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD- 215
            + S+      D       +E +V+      ++   +  G  TSGGT+S  M     RD 
Sbjct: 128 SMDSW------DQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDW 181

Query: 216 YAREEKGISLPEIVLPTT-----------AHPAFDKAANYFGMKVKHIRL---TSSYTVD 261
            A +  G S+ ++ LP             +H    K+A++ G+  K +      +  T+D
Sbjct: 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMD 241

Query: 262 LAALQSAIT-----GNTVMLV----GSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG 312
           +  L   I      G     +    G+     +G +DD+  IA +  K+ + +HVD   G
Sbjct: 242 ITKLDEVIAQAKAEGLIPFAIVGTAGTT---DHGAIDDLDFIADMAVKHDMWMHVDGAYG 298

Query: 313 GFLAPFMSAAGYPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRD 360
           G L          L      L GV    SISVD HK  +       +L  D
Sbjct: 299 GALI---------LSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLVND 340

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A* Length = 450

 Score =  110 bits (275), Expect = 1e-26
 Identities = 53/323 (16%), Positives = 101/323 (31%), Gaps = 59/323 (18%)

Query: 120 LVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA 178
           + S  +AR HY + HG   SG       D+  +  +  G +S  N +          +  
Sbjct: 61  VASALVARRHYRFIHGIGRSG-------DISAVQPKAAG-SSLLNKI-------TNSLVL 105

Query: 179 EVIKMCARMFNGGPETCGC----MTSGGTESI-MMACKAYRDYAREEKGISLPEIVLPTT 233
            VIK+      G      C    M +G + ++  +  +  R  A+         I+ P  
Sbjct: 106 NVIKLA-----GVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKY--------IIWPRI 152

Query: 234 AHPAFDKAANYFGMKVKHIRLT---SSYTVDLAALQSAI----TGNTVMLVGSMPNFPYG 286
              +  K+    G +   I           DL A+++ I      + + L  +   F   
Sbjct: 153 DQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPR 212

Query: 287 TMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKY 346
             D +  +A +   Y IP  V+   G   +  M      L      +  + +      K 
Sbjct: 213 VPDRLEELAVICANYDIPHVVNNAYGLQSSKCM-----HLIQQGARVGRIDAFVQSLDKN 267

Query: 347 GFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406
              P G +++   +  +      ++  +PG    SPS+               ++  G  
Sbjct: 268 FMVPVGGAIIAGFNEPFIQD---ISKMYPGRASASPSLD----------VLITLLSLGCS 314

Query: 407 AQVWICVRYHFNYKSCLQNLSDL 429
               +       +      L  L
Sbjct: 315 GYRKLLKERKEMFVYLSTQLKKL 337

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens} Length = 501

 Score =  108 bits (271), Expect = 7e-26
 Identities = 51/324 (15%), Positives = 105/324 (32%), Gaps = 61/324 (18%)

Query: 120 LVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFG---LTSYTNPLHPDIF--PGV 173
           + S  +AR HY + HG   SG       D+  +  +  G   L   TN L  DI    GV
Sbjct: 79  VASALVARRHYRFIHGIGRSG-------DISAVQPKAAGSSLLNKITNSLVLDIIKLAGV 131

Query: 174 CKMEAEVIKMCARMFNGGPETCGCMTSGGTESI-MMACKAYRDYAREEKGISLPEIVLPT 232
             +    +   A              +G + ++  +  +  R  A+         I+ P 
Sbjct: 132 HTVANCFVVPMA--------------TGMSLTLCFLTLRHKRPKAKY--------IIWPR 169

Query: 233 TAHPAFDKAANYFGMK---VKHIRLTSSYTVDLAALQSAI---TGNTVMLVGSMPN-FPY 285
               +  K+    G +   ++++        DL A+++ +     + ++ + S  + F  
Sbjct: 170 IDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAP 229

Query: 286 GTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK 345
              D +  +A +   Y IP  V+   G   +  M      L      +  + +      K
Sbjct: 230 RVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMH-----LIQQGARVGRIDAFVQSLDK 284

Query: 346 YGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF 405
               P G +++   +  +      ++  +PG    SPS+               ++  G 
Sbjct: 285 NFMVPVGGAIIAGFNDSFIQE---ISKMYPGRASASPSLD----------VLITLLSLGS 331

Query: 406 EAQVWICVRYHFNYKSCLQNLSDL 429
                +       +      +  L
Sbjct: 332 NGYKKLLKERKEMFSYLSNQIKKL 355

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens} Length = 515

 Score =  105 bits (264), Expect = 9e-25
 Identities = 62/289 (21%), Positives = 107/289 (37%), Gaps = 41/289 (14%)

Query: 105 LELPSQGRNRLEILELVSNYLARGHYDWK---HGRVSGAVYYYQQDLVDLLTEVFGLTSY 161
           LEL SQG ++ +ILE     +             ++   +  +      ++TE    + Y
Sbjct: 80  LELRSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSGLDPHAL-AGRIITESLNTSQY 138

Query: 162 TNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA---- 217
           T     +I P    ME EV++    +  G     G    GG+ S M A    R       
Sbjct: 139 TY----EIAPVFVLMEEEVLRKLRALV-GWSSGDGIFCPGGSISNMYAVNLARYQRYPDC 193

Query: 218 REEKGISLPEIVLPTT--AHPAFDKAANYFGMKVKHIRL---TSSYTVDLAALQSAIT-- 270
           ++    +LP + L T+   H +  K A + G+    +R+        +    L+  I   
Sbjct: 194 KQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMA 253

Query: 271 ---GNTVMLV----GSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323
              G    LV    G+      G  D + AIA + +++G+ +HVD   GG +   +S   
Sbjct: 254 EAEGAVPFLVSATSGTTV---LGAFDPLEAIADVCQRHGLWLHVDAAWGGSV--LLS--- 305

Query: 324 YPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF 369
                    L G+    S++ + HK        S +L +D      +  
Sbjct: 306 ---QTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCH 351

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A* Length = 504

 Score =  103 bits (258), Expect = 5e-24
 Identities = 60/281 (21%), Positives = 100/281 (35%), Gaps = 35/281 (12%)

Query: 102 EYFLELPSQGRNRLEILELVSNYLARGHYDWK---HGRVSGAVYYYQQDLVDLLTEVFGL 158
            + LEL     +  +IL    + L  G          ++S  +        + LT     
Sbjct: 61  GFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLDIIGL-AGEWLTSTANT 119

Query: 159 TSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC-GCMTSGGTESIMMACKAYRDYA 217
             +T     +I P    ME   +K    +     +   G  + GG  S M +  A R   
Sbjct: 120 NMFTY----EIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKY 175

Query: 218 ----REEKGISLPEIVLPTT--AHPAFDKAANYFGMKVKHIRL---TSSYTVDLAALQSA 268
               + +   ++P++VL T+  +H +  KA    G    ++ L        +  A  ++ 
Sbjct: 176 FPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAK 235

Query: 269 IT-----GNTVMLV-GSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA 322
           I      G     V  +     YG  D I  IA + EKY + +HVD   GG L   MS  
Sbjct: 236 ILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGL--LMS-- 291

Query: 323 GYPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRD 360
                     L G+    S++ + HK        S +L ++
Sbjct: 292 ----RKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKE 328

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens} Length = 481

 Score =  100 bits (252), Expect = 3e-23
 Identities = 47/287 (16%), Positives = 93/287 (32%), Gaps = 46/287 (16%)

Query: 107 LPSQGRNRLEILELVSNYLARGHYDWKHGR----VSGAVYYYQQDLVDLLTEVFGLTSYT 162
            P    +   I   +   +  G   W+             +    L D+L +        
Sbjct: 51  APEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSL-LGDMLADAIN----C 105

Query: 163 NPLHPDIFPGVCKMEAEVIKMCARMF---------NGGPETCGCMTSGGTESIMMACKAY 213
                   P   ++E  V+   A+M          +   +  G + S  +ES ++A  A 
Sbjct: 106 LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAA 165

Query: 214 RDYAREEKGISLPEIVLPTT-----------AHPAFDKAANYFGMKVKHIRLTSSYTVDL 262
           R     E   S P+    +            AH + +KA     +K+K + +  ++++  
Sbjct: 166 RKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRG 225

Query: 263 AALQSAIT-----GNTV-MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA 316
            ALQ AI      G     +  ++        D +  +  +  + G+ +H+D    G   
Sbjct: 226 EALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTA- 284

Query: 317 PFMSAAGYPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRD 360
            F+       P F   L G+    S + +  K+       +    +D
Sbjct: 285 -FLC------PEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKD 324

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} Length = 475

 Score = 98.6 bits (246), Expect = 1e-22
 Identities = 45/286 (15%), Positives = 97/286 (33%), Gaps = 46/286 (16%)

Query: 107 LPSQGRNRLEILELVSNYLARGHYDWKHGR----VSGAVYYYQQDLVDLLTEVFGLTSYT 162
            P +     ++++ +   +  G   W   +       A  Y    + D+L+         
Sbjct: 46  APEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAI-VADMLSGAIA----C 100

Query: 163 NPLHPDIFPGVCKMEAEVIKMCARMFN--------GGPETCGCMTSGGTESIMMACKAYR 214
                   P   ++E  ++    +M           G +  G +    +ES ++A    +
Sbjct: 101 IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160

Query: 215 DYAREEKGISLPE-----------IVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLA 263
               +E     PE                 AH + ++A    G+K++ ++ + ++ +  A
Sbjct: 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQ-SENHRMRGA 219

Query: 264 ALQSAIT-----GNT-VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP 317
           AL+ AI      G      V ++        D +     +G K+ + +HVD    G    
Sbjct: 220 ALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSA-- 277

Query: 318 FMSAAGYPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRD 360
           F+       P +   + G+    S + + HK+       S +  +D
Sbjct: 278 FIC------PEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKD 317

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A* Length = 486

 Score = 98.6 bits (246), Expect = 2e-22
 Identities = 52/291 (17%), Positives = 93/291 (31%), Gaps = 51/291 (17%)

Query: 105 LELPSQGRNRLEILELVSNYLARGHYDWKHGR----VSGAVYYYQQDLVDLLTEVFGLTS 160
              P +     +IL+ V   +  G   W           A  Y    L D+L    G   
Sbjct: 44  ATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAM-LADMLCGAIGCIG 102

Query: 161 YTNPLHPDIFPGVCKMEAEVIKMCARMFN--------GGPETCGCMTSGGTESIMMACKA 212
           ++        P   ++E  ++    +M             E  G +    +E+ ++A  A
Sbjct: 103 FSW----AASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLA 158

Query: 213 YRDYAREEKGISLPE-----------IVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD 261
            R         + P                  AH + ++A    G+K+K I     + + 
Sbjct: 159 ARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMR 218

Query: 262 LAALQSAIT-----GNTVMLV----GSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG 312
            +ALQ A+      G     V    G+       + D++  +  +  +  I +HVD    
Sbjct: 219 ASALQEALERDKAAGLIPFFVVATLGTTS---CCSFDNLLEVGPICHEEDIWLHVDAAYA 275

Query: 313 GFLAPFMSAAGYPLPPFDFSLPGV---TSISVDTHKYGFTPKGSSVVLYRD 360
           G    F+       P F   L GV    S + + HK+       S +  + 
Sbjct: 276 GSA--FIC------PEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKR 318

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 51/179 (28%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-----FGMKVKHIR 253
           T+G  E+      +       +K      +V+    H      ++Y      G+ +  + 
Sbjct: 75  TNGAREAKFAVMHSL-----AKKD---AWVVMDENCH-----YSSYVAAERAGLNIALVP 121

Query: 254 LT--SSYTVDLAALQSAITGNT------VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPV 305
            T    Y +        I          + L+       YG + D+  IAK+  +Y +P+
Sbjct: 122 KTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGN-YGNLPDVKKIAKVCSEYDVPL 180

Query: 306 HVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD-----THK-YGFTPKGSSVVLY 358
            V+          M        P       +  I  D      HK       G   V+ 
Sbjct: 181 LVNGAYA---IGRM--------PVS-----LKEIGADFIVGSGHKSMA--ASGPIGVMG 221

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B* Length = 423

 Score = 55.6 bits (135), Expect = 1e-08
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY---FGMKVKHIRLT 255
           TSG TES  +A K   ++ +++       I+   T H A           G +V ++   
Sbjct: 91  TSGATESDNLAIKGAANFYQKKGK----HIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ 146

Query: 256 SSYTVDLAALQSAITGNT----VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
            +  +DL  L++A+  +T    +M V    N   G + DI AI ++    GI  HVD   
Sbjct: 147 RNGIIDLKELEAAMRDDTILVSIMHV----NNEIGVVQDIAAIGEMCRARGIIYHVDAT- 201

Query: 312 GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKG 352
                    + G    P D S   V  +S   HK YG  PKG
Sbjct: 202 --------QSVGK--LPIDLSQLKVDLMSFSGHKIYG--PKG 231

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli} Length = 755

 Score = 55.9 bits (134), Expect = 2e-08
 Identities = 43/237 (18%), Positives = 67/237 (28%), Gaps = 50/237 (21%)

Query: 150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESI--- 206
           D+  E   L    + L      G    E+E  K  AR+F  G +    +  G + S    
Sbjct: 189 DMGIERTSLG---SLLDHT---GAFG-ESE--KYAARVF--GADRSWSVVVGTSGSNRTI 237

Query: 207 MMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK----------HIRLTS 256
           M AC    D            +V+    H + ++     G K             I    
Sbjct: 238 MQACMTDND-----------VVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIY 286

Query: 257 SYTVDLAALQSAI----------TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306
              +    LQ  I                 V +   +  G   +      L EK    +H
Sbjct: 287 PQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLH 345

Query: 307 VDCCLGGFLA---PFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD 360
            D    G+      +         P D + P V +    THK       +S +  R+
Sbjct: 346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFAT-HSTHKLLNALSQASYIHVRE 401

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 17/115 (14%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
           +TSG +++I +      +          P   I++P      +   A   G++VK   L 
Sbjct: 123 LTSGCSQAIDLCLAVLAN----------PGQNILVPRPGFSLYKTLAESMGIEVKLYNLL 172

Query: 256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYG---TMDDIGAIAKLGEKYGIPV 305
              S+ +DL  L+  I   T  L+ + P+ P G   +   +  I  +  +  +P+
Sbjct: 173 PEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPI 227

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 17/115 (14%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRLT 255
           + SGG+  I+MA  A  D               ++P    P ++     +G+ +      
Sbjct: 109 LCSGGSHGILMAITAICD----------AGDYALVPQPGFPHYETVCKAYGIGMHFYNCR 158

Query: 256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYG---TMDDIGAIAKLGEKYGIPV 305
             + +  DL  ++      T +L+ + P+ P G   +   +  I +L E+  +P+
Sbjct: 159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPL 213

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 51.0 bits (123), Expect = 4e-07
 Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 201 GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---DKAANYFGMKVKHIRLTSS 257
           G +E I ++   +             +I++     P++   +  A   G+ V    L  +
Sbjct: 86  GASEIIELSISLFE------------KILIIV---PSYAEYEINAKKHGVSVVFSYLDEN 130

Query: 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCC 310
             +D   + S I     +++G+ PN P G +   +    + KL E+    + +D  
Sbjct: 131 MCIDYEDIISKIDDVDSVIIGN-PNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEA 185

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A* Length = 382

 Score = 49.0 bits (118), Expect = 2e-06
 Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 30/162 (18%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY---FGMKVKHIRLT 255
           TSG TE+  +A   Y      +       I++    H +    A +    G +V++I + 
Sbjct: 66  TSGATEANNLAIIGYAMRNARKGK----HILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121

Query: 256 SSYTVDLAALQSAITGNT----VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311
               VD++ +   +  +T    V       N   GT+  +  I+++       +H+D   
Sbjct: 122 KYGEVDVSFIDQKLRDDTILVSVQHA----NNEIGTIQPVEEISEVLAGKAA-LHIDAT- 175

Query: 312 GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKG 352
                   ++ G      D    G   +++ ++  YG  PKG
Sbjct: 176 --------ASVG--QIEVDVEKIGADMLTISSNDIYG--PKG 205

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A* Length = 384

 Score = 48.2 bits (116), Expect = 2e-06
 Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 37/167 (22%)

Query: 199 TSGGTESIMMACK-AYRDYAREEKGISLPEIVLPTTA--HPAFDKAANY---FGMKVKHI 252
           TS  TESI    K     + + ++      I+  TT   H A  +   Y    G KVK++
Sbjct: 67  TSCATESINWILKTVAETFEKRKR-----TII--TTPIEHKAVLETMKYLSMKGFKVKYV 119

Query: 253 RLTSSYTVDLAALQSAITGNT----VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPV--H 306
            + S   V L  L+  +  +T    +M      N   GT+  +  + ++ +K       H
Sbjct: 120 PVDSRGVVKLEELEKLVDEDTFLVSIMAA----NNEVGTIQPVEDVTRIVKKKNKETLVH 175

Query: 307 VDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKG 352
           VD              G    PF      V   S   HK +G  PKG
Sbjct: 176 VDAV---------QTIG--KIPFSLEKLEVDYASFSAHKFHG--PKG 209

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 28/119 (23%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYF------GMKVK 250
           T+G TE++  A  A                E++      P++D   +Y       G  VK
Sbjct: 97  TAGATEALYAAITALVR----------NGDEVICFD---PSYD---SYAPAIALSGGIVK 140

Query: 251 HIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPV 305
            + L    + VD     + ++  T +++ + P+ P  T+    D  A+ +    + I V
Sbjct: 141 RMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFV 199

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A* Length = 456

 Score = 48.2 bits (114), Expect = 4e-06
 Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 18/176 (10%)

Query: 259 TVDLAALQSAITGNT-----VMLVGSMPNFPYGT---MDDIGAIAKLGEKYGIPVHVDCC 310
            +DL  LQ  I          + +    N   G    M ++ A+ +L E +GI V  D  
Sbjct: 157 DIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDAT 216

Query: 311 --LGGFLAPFMSAAGYPLPPFD----FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364
             +           G+                   ++   K      G  + +  D  + 
Sbjct: 217 RCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFS 276

Query: 365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYK 420
             +  V       +YG  +    R    +A      M + +     +    +   K
Sbjct: 277 SAKELVVVYEGMPSYGGLA---GRDMEAMAIGLREAMQYEYIEHR-VKQVRYLGDK 328

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 30/121 (24%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYF------GMKVK 250
           T G TE+I  A     +          P  E++L     P +D   +Y       G    
Sbjct: 92  TVGATEAIAAAVLGLVE----------PGSEVLLIE---PFYD---SYSPVVAMAGAHRV 135

Query: 251 HIRLT---SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIP 304
            + L      + +D  AL+ A+T  T  L+ + P+ P G +    ++ AIA++     + 
Sbjct: 136 TVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLV 195

Query: 305 V 305
           V
Sbjct: 196 V 196

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A* Length = 427

 Score = 46.7 bits (111), Expect = 8e-06
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMP------NFPYGTMDDIGAIAKL- 297
           FG+  K + L      +L  ++  +  +  + +  +             ++DI +I    
Sbjct: 147 FGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCV 206

Query: 298 -GEKYGIPVHVDCCLGGFLA 316
              +  I   VD C G F+ 
Sbjct: 207 KNIRKDIICFVDNCYGEFMD 226

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 16/115 (13%), Positives = 32/115 (27%), Gaps = 9/115 (7%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS- 257
           T G  +   ++         + +       +                G K +   L    
Sbjct: 111 TVGSMQGCFVSFLVANR-THKNRE---YGTLFIDPGFNLNKLQCRILGQKFESFDLFEYR 166

Query: 258 -YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVD 308
              +         TG    ++ S PN P       +++  I +L  K+ + V  D
Sbjct: 167 GEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIED 221

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 30/121 (24%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYF------GMKVK 250
           TSG TE++ +  ++             P  E+V+     P FD    Y       G K +
Sbjct: 84  TSGATEALYVLLQSLVG----------PGDEVVVLE---PFFD---VYLPDAFLAGAKAR 127

Query: 251 HIRLTSS---YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIP 304
            +RL  +   + +DL+AL+ A+T  T  L+ + P  P G +    ++ AIA+L   + + 
Sbjct: 128 LVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLF 187

Query: 305 V 305
           +
Sbjct: 188 L 188

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 67/427 (15%), Positives = 120/427 (28%), Gaps = 120/427 (28%)

Query: 40  VYVYESLFSRDPFD----TDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIK 95
           + V+E  F  + FD     D     L K        I  +  K         +LF   + 
Sbjct: 22  LSVFEDAFVDN-FDCKDVQDMPKSILSKEEID---HI--IMSKDAVS--GTLRLFWTLLS 73

Query: 96  QNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEV 155
           +    ++ F+E         E+L +        +Y +    +       +Q    ++T +
Sbjct: 74  KQEEMVQKFVE---------EVLRI--------NYKFLMSPIK---TEQRQP--SMMTRM 111

Query: 156 FGLTSYTNPLH--PDIFP--GVCKMEAEVIKMCARMFNGGPET----CGCMTSGGTESIM 207
           +      + L+    +F    V +++   +K+   +    P       G +   G+    
Sbjct: 112 Y--IEQRDRLYNDNQVFAKYNVSRLQ-PYLKLRQALLELRPAKNVLIDG-V--LGSGKTW 165

Query: 208 MACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQS 267
           +A      Y  + K                 D     F + +K+     +    L  L  
Sbjct: 166 VALDVCLSYKVQCK----------------MD--FKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 268 AITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327
            I  N         N            A+L        + +C L   L    +A      
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHS---IQAELRRLLKSKPYENCLL--VLLNVQNAK--AWN 260

Query: 328 PFDFS---LPGVTS----------------ISVDTHKYGFTPKGSSVVLYRDLKYKHCQY 368
            F+ S   L  +T+                IS+D H    TP     +L   LKY  C+ 
Sbjct: 261 AFNLSCKIL--LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL---LKYLDCR- 314

Query: 369 FVTSDWPG-GNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNY-------K 420
               D P      +P          ++    ++         W     H N        +
Sbjct: 315 --PQDLPREVLTTNPRR--------LSIIAESIRDGLATWDNWK----HVNCDKLTTIIE 360

Query: 421 SCLQNLS 427
           S L  L 
Sbjct: 361 SSLNVLE 367

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 7e-04
 Identities = 35/269 (13%), Positives = 63/269 (23%), Gaps = 94/269 (34%)

Query: 48  SRDPFDTDSLTGKLKKRVFKLARKIPA------VRKKLEEETGKVAKLF----------Q 91
           S       S+  +L+ R+ K             V+        K    F          +
Sbjct: 221 SNIKLRIHSIQAELR-RLLKSKPYENCLLVLLNVQNA------KAWNAFNLSCKILLTTR 273

Query: 92  D----DIKQNNAGLEYFLELPSQGRNRLEILELVSNYLA--------------------- 126
                D           L+  S      E+  L+  YL                      
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333

Query: 127 ----RGHYD-WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPD----------IFP 171
               R     W           ++    D LT +    S    L P           +FP
Sbjct: 334 AESIRDGLATWD---------NWKHVNCDKLTTIIES-SLNV-LEPAEYRKMFDRLSVFP 382

Query: 172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG--ISLPEIV 229
               +   ++ +   ++    ++           ++     Y    ++ K   IS+P I 
Sbjct: 383 PSAHIPTILLSL---IWFDVIKSD-------VMVVVNKLHKYSLVEKQPKESTISIPSIY 432

Query: 230 LPTTAHPAFDKAANYFGMKVKHIRLTSSY 258
           L        + A         H  +   Y
Sbjct: 433 LELKVKLENEYA--------LHRSIVDHY 453

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 17/117 (14%), Positives = 41/117 (35%), Gaps = 17/117 (14%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRLT- 255
           T+G T + ++   +  +          P   ++     +          G +V   ++  
Sbjct: 87  TNGATGANLLVLYSLIE----------PGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEE 136

Query: 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVD 308
            + +  DL  L+  I   T M+  +  N P G +     +  + ++  + G  +  D
Sbjct: 137 ENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSD 193

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 31/132 (23%)

Query: 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDK---AANYFG 246
           P T   +T G  E++    + + D             E+++     P FD         G
Sbjct: 100 PMTEVLVTVGAYEALYATIQGHVD----------EGDEVIIIE---PFFDCYEPMVKAAG 146

Query: 247 MKVKHIRLT----------SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGA 293
              + I L           + + +D   L++     T M++ + P+ P G +    ++  
Sbjct: 147 GIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEV 206

Query: 294 IAKLGEKYGIPV 305
           +A L +K+ +  
Sbjct: 207 VANLCKKWNVLC 218

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A* Length = 730

 Score = 44.3 bits (104), Expect = 7e-05
 Identities = 36/282 (12%), Positives = 71/282 (25%), Gaps = 59/282 (20%)

Query: 117 ILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYT-----------NPL 165
             + +  Y++R    +      G  YY +        + FG T +            + L
Sbjct: 110 FFKSLKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLL 169

Query: 166 HPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISL 225
             +   G     AE  K  AR++    +    +  G + +      A    +  +     
Sbjct: 170 IHE---GPAV-AAE--KHAARVY--NADKTYFVLGGSSNANNTVTSALV--SNGDL---- 215

Query: 226 PEIVLPTTAH-------------------PAFDKAANYFGMKVKHIRLTS-SYTVDLAAL 265
             ++     H                      +      G+                   
Sbjct: 216 --VLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDP 273

Query: 266 QSAITGNTV-MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA-----PFM 319
           + A       + V  +  +  GT+ +   + K        +  D    G+          
Sbjct: 274 ERAKWKRPFRLAVIQLGTY-DGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNS 332

Query: 320 SA-AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD 360
           S      L P D  +  V S     HK       +S +  +D
Sbjct: 333 SPLLIDDLGPEDPGIIVVQS----VHKQQAGFSQTSQIHKKD 370

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 23/130 (17%)

Query: 185 ARMFNGGPE--TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA 242
           A                 G +E I  A +AY   A  E      ++V+P   +   +  A
Sbjct: 61  AAHHQVEAPSILLTA---GSSEGIRAAIEAY---ASLEA-----QLVIPELTYGDGEHFA 109

Query: 243 NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSM-----PNFPYGTMDDIGAIAKL 297
              GMKV  +++  ++  D+  L++A+   +     S+     PN P GT+     I   
Sbjct: 110 KIAGMKVTKVKMLDNWAFDIEGLKAAVAAYS---GPSIVYLVNPNNPTGTITPADVIEPW 166

Query: 298 GEKYGIPVHV 307
                 P + 
Sbjct: 167 IAS--KPANT 174

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A* Length = 374

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 261 DLAALQSAITGNTVML-VGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG 312
            +  + + I  +T+++  GS  +     +++   +    +     V VD   G
Sbjct: 130 KVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASG 182

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A* Length = 409

 Score = 43.6 bits (103), Expect = 8e-05
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLV----GSMPNFPYGTMDDIGAIAKLGEK 300
           F +    + L  +  VD   +   +T  T M+         + P  T++ I  +    + 
Sbjct: 132 FHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKN 191

Query: 301 YG--IPVHVDCCLGGFLAP 317
               + V VD C G F+  
Sbjct: 192 INPEVIVFVDNCYGEFVEY 210

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A* Length = 398

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297
              +   FG+ V+ +            +++A+   T ++    P  P  ++ DI  +A +
Sbjct: 120 LSHSMPKFGINVRFVDAA-----KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGI 174

Query: 298 GEKYGIPVHVD 308
             + G  + VD
Sbjct: 175 AHQQGALLVVD 185

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 32/133 (24%)

Query: 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDK---AANYFG 246
           P     +  G   S+  + +   D          P  E+++     P +D         G
Sbjct: 84  PNEEILVAVGAYGSLFNSIQGLVD----------PGDEVIIMV---PFYDCYEPMVRMAG 130

Query: 247 MKVKHIRL-----------TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIG 292
                I L           +S +T D   L+S  +  T  ++ + P+ P G +    ++ 
Sbjct: 131 AVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQ 190

Query: 293 AIAKLGEKYGIPV 305
            IA L  K+    
Sbjct: 191 VIADLCVKHDTLC 203

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A* Length = 398

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 8/81 (9%)

Query: 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297
                  FG+K++H+ +      DL AL++A+T  T ++    P  P   M DI  +AK+
Sbjct: 121 LHHGIGEFGVKLRHVDMA-----DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKI 175

Query: 298 GEKYGIPVHVDCCLGGFLAPF 318
             K+G  V VD     +  P+
Sbjct: 176 ARKHGATVVVDNT---YCTPY 193

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 33/134 (24%)

Query: 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDK---AANYFG 246
           P     +T GG  ++  A +A  D             E+++     P FD         G
Sbjct: 90  PLRNVLVTVGGYGALFTAFQALVD----------EGDEVIIIE---PFFDCYEPMTMMAG 136

Query: 247 MKVKHIRLT------------SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDI 291
            +   + L             S++ +D   L    T  T  LV + PN P G +   +++
Sbjct: 137 GRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREEL 196

Query: 292 GAIAKLGEKYGIPV 305
             +A L +++ +  
Sbjct: 197 ELVASLCQQHDVVC 210

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 15/125 (12%)

Query: 185 ARMFNGGPE--TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA 242
           A  +    E         G  E I +  +                 V+ T     + + A
Sbjct: 77  ADFYQLEEEELIFTA---GVDELIELLTRVL---LDTTT-----NTVMATPTFVQYRQNA 125

Query: 243 NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG 302
              G +V+ I L      DL  + +AI   T ++    PN P G   ++  I    ++  
Sbjct: 126 LIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDR-- 183

Query: 303 IPVHV 307
           +P  V
Sbjct: 184 VPSDV 188

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 17/114 (14%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYFGMKVKHIRLT- 255
           T+  TE++ +   A  D          P  EI++P  ++P +     ++G K    R   
Sbjct: 107 TAAVTEALQLIFGALLD----------PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIE 156

Query: 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYG---TMDDIGAIAKLGEKYGIPV 305
              +  D+  ++  IT  T  +    PN P G       +  I  +  +Y IPV
Sbjct: 157 EEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPV 210

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 39/128 (30%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLP--EIVLPTTAHPAFDKAANYF------GMKVK 250
           T+G  E I+       +             E+++     P FD    Y       G KV 
Sbjct: 124 TTGANEGILSCLMGLLN----------AGDEVIVFE---PFFD---QYIPNIELCGGKVV 167

Query: 251 HIRLT------------SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIA 295
           ++ +               +T+D    + AIT  T  ++ + P+ P G +   +++  + 
Sbjct: 168 YVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLG 227

Query: 296 KLGEKYGI 303
            +  K+ +
Sbjct: 228 NICVKHNV 235

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus} Length = 412

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 10/72 (13%)

Query: 261 DLAALQSAITGNTVMLVG-SMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM 319
           +  A++ A++  T  +   ++ N P   + D+ A+A L E+ G+ + VD   G       
Sbjct: 129 EPEAVREALSAKTRAVFVETVAN-PALLVPDLEALATLAEEAGVALVVDNTFG------- 180

Query: 320 SAAGYPLPPFDF 331
            AAG    P  +
Sbjct: 181 -AAGALCRPLAW 191

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Length = 467

 Score = 41.7 bits (97), Expect = 3e-04
 Identities = 27/221 (12%), Positives = 57/221 (25%), Gaps = 31/221 (14%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMKVKHI----- 252
              G  +  +          ++K       V  +  H     A     G K  +I     
Sbjct: 97  AHQGRGAENILFPVLL--KYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKA 154

Query: 253 -----RLTSSYTVDLAALQSAITGNT-----VMLVGSMPNFPYGT---MDDIGAIAKLGE 299
                        D+  L+  I  +       ++     N   G    M ++  + ++ +
Sbjct: 155 FDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAK 214

Query: 300 KYGIPVHVDCCLGGFLAPF--MSAAGY----PLPPFDFSLPGVTSISVDTHKYGFTPKGS 353
           ++GI V +D       A F       Y                 ++++   K      G 
Sbjct: 215 QHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGG 274

Query: 354 SVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIA 394
            V     ++     + +         G  +  G     + A
Sbjct: 275 LVA----IRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAA 311

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis} Length = 414

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297
             +    +G++   +        DL+  + A++  T  +    P+ P  ++ DI A+ +L
Sbjct: 137 CSEILPRWGVQTVFVDGD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTEL 191

Query: 298 GEKYGIPVHVD 308
               G  V +D
Sbjct: 192 AHAAGAKVVLD 202

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A* Length = 389

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297
           F      FG++V  I  +     D+  +++A   NT M+    P  P   + DI  IA +
Sbjct: 115 FTHWLPRFGIEVDLIDTS-----DVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVV 169

Query: 298 GEKYGIPVHVDCCLGGFLAPF 318
             + G  + VD     F +P 
Sbjct: 170 CHERGARLVVDAT---FTSPC 187

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes} Length = 430

 Score = 40.2 bits (95), Expect = 9e-04
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 11/72 (15%)

Query: 261 DLAALQSAITGNTVMLVG-SMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM 319
           D  A++ A    T +L   ++ N P   + D+ A++K+    GIP+ VD  +        
Sbjct: 156 DSLAVEHACDETTKLLFLETISN-PQLQVADLEALSKVVHAKGIPLVVDTTM-------- 206

Query: 320 SAAGYPLPPFDF 331
               Y L     
Sbjct: 207 -TPPYLLEAKRL 217

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A* Length = 432

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 36/142 (25%)

Query: 199 TSGGTES----IMMACKAYRDYAREEKGISLPEIVLP-------TTA--HPAFDKAANYF 245
           TSGGTES    I    + + +    +                  T    H +      + 
Sbjct: 84  TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHL 143

Query: 246 ----GMKVKHIRLTSSY-TVDLAALQSAITGNT----VMLVGSMPNFPYGTMDDIGAIAK 296
                 +V  + ++     V++  + +A+   T    +ML     N   G +  I  I++
Sbjct: 144 VEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLA----NNETGVIMPISEISR 199

Query: 297 LGEKYG----------IPVHVD 308
             +             + VH D
Sbjct: 200 RIKALNQIRAASGLPRVLVHTD 221

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	435
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	100.0
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	100.0
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	100.0
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	100.0
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	100.0
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	100.0
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	100.0
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	100.0
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.96
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.96
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.95
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.95
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.95
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.95
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.95
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.94
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.94
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.94
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.94
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.93
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.93
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.93
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.93
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.93
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.93
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.93
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.93
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.93
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.93
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.93
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.93
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.93
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.92
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.92
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.92
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.92
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.91
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.91
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.91
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.91
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.9
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.9
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.9
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.9
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.9
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.9
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.9
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.9
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.9
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.9
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.9
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.9
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.9
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.9
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.9
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.9
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.9
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.9
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.89
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.89
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.89
1svv_A	359	Threonine aldolase; structural genomics, structura	99.89
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.89
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.89
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.89
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.89
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.89
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.89
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.89
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.88
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.88
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.88
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.88
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.88
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.88
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.88
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.88
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.88
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.88
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.88
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.88
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.88
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.88
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.88
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.87
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.87
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.87
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.87
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.87
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.87
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.87
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.87
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.87
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.87
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.86
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.86
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.86
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.86
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.86
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.86
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.86
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.86
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.86
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.86
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.85
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.85
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.85
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.85
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.85
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.85
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.85
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.85
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.85
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.85
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.85
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.85
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.85
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.85
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.85
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.85
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.85
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.85
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.85
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.85
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.84
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.84
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.84
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.84
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.84
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.84
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.84
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.84
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.83
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.83
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.83
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.83
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.83
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.83
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.83
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.83
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.83
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.83
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.83
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.83
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.83
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.83
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.83
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.83
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.82
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.82
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.82
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.82
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.82
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.82
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.82
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.82
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.82
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.81
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.81
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.81
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.81
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.81
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.81
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.81
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.81
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.81
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.81
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.81
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.81
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.81
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.81
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.81
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.8
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.8
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.8
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.8
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.8
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.8
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.8
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.68
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.8
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.8
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.79
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.79
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.79
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.79
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.79
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.79
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.79
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.79
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.79
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.79
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.79
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.79
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.78
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.78
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.77
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.77
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.77
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.77
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.77
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.77
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.77
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.77
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.76
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.76
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.76
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.75
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.75
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.75
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.75
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.75
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.74
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.73
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.73
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.72
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.71
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.7
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.7
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.7
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.69
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.69
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.68
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.67
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.66
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.61
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.6
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.36
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.51
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.37

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-44  Score=367.44  Aligned_cols=362  Identities=45%  Similarity=0.806  Sum_probs=296.8

Q ss_pred             hchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhC-CCCCCCCCcccccccCChHhHH
Q psy10210         71 KIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLAR-GHYDWKHGRVSGAVYYYQQDLV  149 (435)
Q Consensus        71 ~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~l~  149 (435)
                      .+|.++++++++++++..++.+++.+......+...+|+.+.+.+++++.+.+.... ++..|.++.+.+..+.+.+.+.
T Consensus         2 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   81 (497)
T 3mc6_A            2 GSPFLRGTVEKEVTKVKQSIEDELIRSDSQLMNFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLI   81 (497)
T ss_dssp             -----------------------------CCCCCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhhcCCccccccccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHH
Confidence            478999999999999998888877776666677889999999999999999998875 6788888898888888889999


Q ss_pred             HHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeE
Q psy10210        150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEI  228 (435)
Q Consensus       150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~v  228 (435)
                      +++.+.+..+...|+++++.+|+..+++.++++++++++|.+ ..+++++|+|||+|+.+++++++++...++|.++++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~V  161 (497)
T 3mc6_A           82 HLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEI  161 (497)
T ss_dssp             HHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEE
T ss_pred             HHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceE
Confidence            999999999888889999999999999999999999999998 3458999999999999999999987776678778899


Q ss_pred             EEeCCCchhHHHHHHHcCCEEEEEecCC-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210        229 VLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV  307 (435)
Q Consensus       229 iv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv  307 (435)
                      +++.++|+++.++++..|++++.||+++ ++.+|++++++++++++++|++++|+||+|.++++++|.++|++||+++|+
T Consensus       162 i~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~liv  241 (497)
T 3mc6_A          162 IAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHV  241 (497)
T ss_dssp             EEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEE
T ss_pred             EEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEE
Confidence            9999999999999999999999999986 889999999999999999999999999999999999999999999999999


Q ss_pred             eccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCcccc
Q psy10210        308 DCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSG  386 (435)
Q Consensus       308 D~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~g  386 (435)
                      |++|+++..+|.+..|++.. ++++...|+|+++.++||++++|.|+|+++++++.+....+...+.|.++.++++++.|
T Consensus       242 D~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  321 (497)
T 3mc6_A          242 DSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAG  321 (497)
T ss_dssp             ETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCS
T ss_pred             ECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCccc
Confidence            99999999988877777644 68888899999999999999899999999998887766666677899999888999999


Q ss_pred             CCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH---HHHh-cCCcccc
Q psy10210        387 SRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS---CLQN-LSDLWLY  432 (435)
Q Consensus       387 sr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~---~~~~-l~~l~~~  432 (435)
                      +|++..++++|++++.++.+++.+.+++..+..+.   .+++ ++++..+
T Consensus       322 ~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~  371 (497)
T 3mc6_A          322 SRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIM  371 (497)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEC
T ss_pred             CCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            99999889999999999999888777766655444   4455 4565554

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=100.00  E-value=6.1e-40  Score=338.72  Aligned_cols=343  Identities=45%  Similarity=0.779  Sum_probs=291.9

Q ss_pred             HHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCc
Q psy10210         90 FQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDI  169 (435)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~  169 (435)
                      +.+.+.+..........+|..+.+++++++.+.+....+...|.++.+.+..+.+.+.+.+.+.+.+......|++++..
T Consensus        54 ~~~~~~~~~~~~~~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (514)
T 3mad_A           54 LRSQIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDL  133 (514)
T ss_dssp             -----CTTTTTSCCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTT
T ss_pred             HHhhcCCCccccCccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCccccc
Confidence            33333333334455678899999999999999998766666677778888888888888999999888877788889999


Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCC-Cce--EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPE-TCG--CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG  246 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~-~~~--~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g  246 (435)
                      +|...++|.++++++++++|.+.+ +++  ++|+|||+|+.++++++++++..++|.++++|+++.++|+++.++++..|
T Consensus       134 ~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G  213 (514)
T 3mad_A          134 WPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFG  213 (514)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcC
Confidence            999999999999999999998731 245  99999999999999999998876677778899999999999999999999


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      ++++.+|+++++.+|+++|++++++++++|++++|+||+|.++++++|.++|++||+++|+|++|++++.++.+..|.+.
T Consensus       214 ~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~  293 (514)
T 3mad_A          214 IKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPV  293 (514)
T ss_dssp             CEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCC
T ss_pred             CeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCC
Confidence            99999999988999999999999999999999999999999999999999999999999999999999988777777766


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                      +++++...|+|++++++||++++|.|+|+++++++.+....+....+|.++.+..+++.|++.+..++++|+++..++.+
T Consensus       294 ~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~  373 (514)
T 3mad_A          294 PPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE  373 (514)
T ss_dssp             CCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH
Confidence            78888889999999999999889999999999998877766667788998888778889999998888999999999988


Q ss_pred             HHHHHHHHHHHHHHHHH---HhcCCcccc
Q psy10210        407 AQVWICVRYHFNYKSCL---QNLSDLWLY  432 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~---~~l~~l~~~  432 (435)
                      ++.+.+++..+..+.+.   ++++++..+
T Consensus       374 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~  402 (514)
T 3mad_A          374 GYLDATRRILQAADRLKAGVRAIPSLKIL  402 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSTTCEES
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence            88777766666555444   444555443

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=100.00  E-value=1.1e-36  Score=309.36  Aligned_cols=313  Identities=20%  Similarity=0.323  Sum_probs=249.6

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHh-CCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLA-RGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      ...+|+.+.+++++++.+.+.+. .+...+..+.+..  ....|.+.+++.+.+..    ++.+++.+|+..+++.++++
T Consensus        15 ~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~v~e~~~~a~~~----~~~~~~~~~~~~~l~~~~~~   88 (452)
T 2dgk_A           15 SKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQ--TWDDENVHKLMDLSINK----NWIDKEEYPQSAAIDLRCVN   88 (452)
T ss_dssp             CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC--CCCCHHHHHHHHHTTTC----BTTCTTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC--CCchHHHHHHHHHHhcc----CCCChhhChhHHHHHHHHHH
Confidence            45689999999999999999884 3333343333222  22346777777666643    56677888999999999999


Q ss_pred             HHHHHhCCCCCC----ceEEcCChHHHHHHHHHHHHHHhhh---hcCC--CCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        183 MCARMFNGGPET----CGCMTSGGTESIMMACKAYRDYARE---EKGI--SLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       183 ~la~l~g~~~~~----~~~~t~ggteai~~a~~a~~~~~~~---~~g~--~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      ++++++|.+.+.    .+++|+|||+|+.+++.++++....   ..|.  .+++|++++ +|.++.++++..|++++.||
T Consensus        89 ~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~  167 (452)
T 2dgk_A           89 MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIP  167 (452)
T ss_dssp             HHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECC
T ss_pred             HHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEe
Confidence            999999998653    4999999999999999998753211   1232  246899999 99999999999999999999


Q ss_pred             cCC-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc------CCcEEEeccccchhhhcccccCCCC
Q psy10210        254 LTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY------GIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       254 ~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~------~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      +++ ++.+|+++++++++++|++|++++|+||||.++|+++|.++|++|      |+++|+|++|++++.+|....    
T Consensus       168 ~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~----  243 (452)
T 2dgk_A          168 MRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPD----  243 (452)
T ss_dssp             CBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT----
T ss_pred             cCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCcc----
Confidence            985 799999999999999999999999999999999999999999996      999999999999877553221    


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                      .++++...++|++++++|||+++|.++|+++++++++........+.|.++.+.+.++.++|++..++++|++++.+|.+
T Consensus       244 ~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~  323 (452)
T 2dgk_A          244 IVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGRE  323 (452)
T ss_dssp             CCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHH
T ss_pred             chhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHH
Confidence            14566667899999999999999999999999887654333334567777655556678899997778999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC
Q psy10210        407 AQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++.+.+++..+..+.+.+.|.
T Consensus       324 g~~~~~~~~~~~a~~l~~~L~  344 (452)
T 2dgk_A          324 GYTKVQNASYQVAAYLADEIA  344 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            998888777766665555443

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-35  Score=299.56  Aligned_cols=321  Identities=16%  Similarity=0.124  Sum_probs=249.1

Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHH
Q psy10210        102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVI  181 (435)
Q Consensus       102 ~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  181 (435)
                      .+...+|+.+.+.+++++.+.+.+..+...|.++.+.+..+.+. .....+.+++....+.|..+++.+|...++|.++.
T Consensus        46 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~  124 (481)
T 4e1o_A           46 QLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALT-SWPSLLGDMLADAINCLGFTWASSPACTELEMNVM  124 (481)
T ss_dssp             GSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCCCC-CHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHH
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCC-CHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHH
Confidence            34557899999999999999999888888888888776665541 11123333333333457788889999999999999


Q ss_pred             HHHHHHhCCCCC---------CceEEcCChHHHHHHHHHHHHHHhhhh---cCC--------CCCeEEEeCCCchhHHHH
Q psy10210        182 KMCARMFNGGPE---------TCGCMTSGGTESIMMACKAYRDYAREE---KGI--------SLPEIVLPTTAHPAFDKA  241 (435)
Q Consensus       182 ~~la~l~g~~~~---------~~~~~t~ggteai~~a~~a~~~~~~~~---~g~--------~~~~viv~~~~~~~~~~~  241 (435)
                      +|+++++|.+..         ..+++|+|||+|+.+++.+++++...+   .|.        ++.+|++++.+|.++.++
T Consensus       125 ~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~  204 (481)
T 4e1o_A          125 DWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKA  204 (481)
T ss_dssp             HHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHH
T ss_pred             HHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHH
Confidence            999999998754         268999999999999999998753221   111        356799999999999999


Q ss_pred             HHHcCCEEEEEecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210        242 ANYFGMKVKHIRLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL  315 (435)
Q Consensus       242 ~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~  315 (435)
                      ++..|++++.||+++++.+|+++|+++|+++      +.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++.
T Consensus       205 ~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~  284 (481)
T 4e1o_A          205 GLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTA  284 (481)
T ss_dssp             HHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGG
T ss_pred             HHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHH
Confidence            9999999999999988999999999999764      7889999999999999999999999999999999999999876


Q ss_pred             hhcccccCCCCCCCCCCCCC---ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-------CCCCCccc
Q psy10210        316 APFMSAAGYPLPPFDFSLPG---VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-------NYGSPSVS  385 (435)
Q Consensus       316 ~~~~~~~g~~~~~~d~~~~g---vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-------~~~~~~~~  385 (435)
                      +...        .+.....|   +|++++++|||+++|.|+|+++++++......+...+.|...       .+...++.
T Consensus       285 ~~~~--------~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  356 (481)
T 4e1o_A          285 FLCP--------EFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIP  356 (481)
T ss_dssp             GGSG--------GGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSS
T ss_pred             HhCh--------hhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCccccccc
Confidence            5321        11222234   499999999999999999999999887643322222322211       23345677


Q ss_pred             cCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH---hcCCcccc
Q psy10210        386 GSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ---NLSDLWLY  432 (435)
Q Consensus       386 gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l~~~  432 (435)
                      ++|++.+ .++|++++.+|.+++.+.+++..+.++.+.+   ++++++.+
T Consensus       357 ~~r~~~~-l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~  405 (481)
T 4e1o_A          357 LSRRFRS-VKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP  405 (481)
T ss_dssp             SCCCCTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred             CCCCccH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            8888665 5899999999999999888887776665554   44555544

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=100.00  E-value=6.4e-35  Score=298.04  Aligned_cols=321  Identities=14%  Similarity=0.121  Sum_probs=243.4

Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHH
Q psy10210        102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVI  181 (435)
Q Consensus       102 ~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  181 (435)
                      .+...+|+.+.+.+++++.+.+.+..+...|.++.+.+..+.+. .....+.+++....+.|...++.+|...++|.+++
T Consensus        41 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~  119 (475)
T 3k40_A           41 LIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTAN-SYPAIVADMLSGAIACIGFTWIASPACTELEVVMM  119 (475)
T ss_dssp             GSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSSCCCC-CHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHH
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeCCCCC-cHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHH
Confidence            34568899999999999999999888888898888877776542 22334445555444567788889999999999999


Q ss_pred             HHHHHHhCCCCC--------CceEEcCChHHHHHHHHHHHHHHhhhh---cCC--------CCCeEEEeCCCchhHHHHH
Q psy10210        182 KMCARMFNGGPE--------TCGCMTSGGTESIMMACKAYRDYAREE---KGI--------SLPEIVLPTTAHPAFDKAA  242 (435)
Q Consensus       182 ~~la~l~g~~~~--------~~~~~t~ggteai~~a~~a~~~~~~~~---~g~--------~~~~viv~~~~~~~~~~~~  242 (435)
                      +|+++++|.+..        ..+++|+|||+|+.+++.++++....+   .|.        ++.+|++++.+|+++.+++
T Consensus       120 ~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~  199 (475)
T 3k40_A          120 DWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAG  199 (475)
T ss_dssp             HHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHH
T ss_pred             HHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHH
Confidence            999999999753        268999999999999999997653221   111        2457999999999999999


Q ss_pred             HHcCCEEEEEecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210        243 NYFGMKVKHIRLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA  316 (435)
Q Consensus       243 ~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~  316 (435)
                      +..|++++.||+++++ +|+++|+++|+++      +.+|++++++|++|.++|+++|+++|++||+++|+|++|+++..
T Consensus       200 ~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~  278 (475)
T 3k40_A          200 LLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAF  278 (475)
T ss_dssp             HHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGG
T ss_pred             HHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHH
Confidence            9999999999999889 9999999999764      67899999999999999999999999999999999999998755


Q ss_pred             hcccccCCCCCCCCCCCC---CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-------CCCCCcccc
Q psy10210        317 PFMSAAGYPLPPFDFSLP---GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-------NYGSPSVSG  386 (435)
Q Consensus       317 ~~~~~~g~~~~~~d~~~~---gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-------~~~~~~~~g  386 (435)
                      ...+        +.....   .+|++++++|||+++|.|+|+++++++......+...+.|...       .+...++.+
T Consensus       279 ~~~~--------~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  350 (475)
T 3k40_A          279 ICPE--------YRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPL  350 (475)
T ss_dssp             GSGG--------GGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC---------------------------CC
T ss_pred             hCHh--------hHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccC
Confidence            3211        111122   3699999999999999999999999987654322222333211       134456778


Q ss_pred             CCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH---HhcCCccccc
Q psy10210        387 SRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCL---QNLSDLWLYL  433 (435)
Q Consensus       387 sr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~---~~l~~l~~~~  433 (435)
                      +|++.+ .++|++++.+|.+++.+.+++..+.++.+.   +++++++.+.
T Consensus       351 sr~~~~-l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~  399 (475)
T 3k40_A          351 GRRFRA-LKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAA  399 (475)
T ss_dssp             CGGGTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESS
T ss_pred             CCcccH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence            888655 589999999999999988887776655554   4555665543

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=100.00  E-value=6.1e-34  Score=293.30  Aligned_cols=320  Identities=20%  Similarity=0.163  Sum_probs=249.6

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +...+|+.+.+.+++++.+.+.+.. +..|.++.+.+..+.+. .....+.+++......+...+..+|+..++|.++++
T Consensus        65 ~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~p~f~~~~~~~~-~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~  142 (511)
T 3vp6_A           65 FNLELSDHPESLEQILVDCRDTLKY-GVRTGHPRFFNQLSTGL-DIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLK  142 (511)
T ss_dssp             BCCCCCSSCCCHHHHHHHHHHHHHT-SCCTTSTTEESSSSCCC-CHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHhhc-cCCCCCCCceEeecCCC-cHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHH
Confidence            4567899999999999999988765 45666777766665542 223344444444444567778889999999999999


Q ss_pred             HHHHHhCCCC-CCceEEcCChHHHHHHHHHHHHHHhh---hhcCC---CCCeEEEeCCCchhHHHHHHHcCC---EEEEE
Q psy10210        183 MCARMFNGGP-ETCGCMTSGGTESIMMACKAYRDYAR---EEKGI---SLPEIVLPTTAHPAFDKAANYFGM---KVKHI  252 (435)
Q Consensus       183 ~la~l~g~~~-~~~~~~t~ggteai~~a~~a~~~~~~---~~~g~---~~~~viv~~~~~~~~~~~~~~~g~---~v~~v  252 (435)
                      |+++++|.+. ..++++|+|||+|+..++.++++...   .++|+   ++.+|++++++|+++.++++..|+   +++.+
T Consensus       143 ~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v  222 (511)
T 3vp6_A          143 KMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI  222 (511)
T ss_dssp             HHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE
T ss_pred             HHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEe
Confidence            9999999984 25899999999999999999886421   12342   355799999999999999999998   99999


Q ss_pred             ecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      |+++++.+|+++|+++|+++      +++|++++++|++|.++|+++|+++|++||+|+|+|++|+++.+...       
T Consensus       223 ~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-------  295 (511)
T 3vp6_A          223 KCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSR-------  295 (511)
T ss_dssp             CBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCT-------
T ss_pred             ecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhCh-------
Confidence            99988999999999999865      89999999999999999999999999999999999999999877432       


Q ss_pred             CCCCCCC---CCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC---------CCCCCccccCCCchHHH
Q psy10210        327 PPFDFSL---PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG---------NYGSPSVSGSRSGGIIA  394 (435)
Q Consensus       327 ~~~d~~~---~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg---------~~~~~~~~gsr~~~~ia  394 (435)
                       .+....   .++|++++++|||+++|.|+|+++++++.+.+..+...+.|...         .++..++.++|++.+ .
T Consensus       296 -~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~a-l  373 (511)
T 3vp6_A          296 -KHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDI-F  373 (511)
T ss_dssp             -TTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCH-H
T ss_pred             -hhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHH-H
Confidence             222222   35699999999999999999999999987654433333444321         123456778888765 5


Q ss_pred             HHHHHHHHhcHHHHHHHHHHHHHHHHHHHH---hcCCccccc
Q psy10210        395 TCWAAMMYFGFEAQVWICVRYHFNYKSCLQ---NLSDLWLYL  433 (435)
Q Consensus       395 ~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l~~~~  433 (435)
                      ++|++++.+|.+++.+++++..+.++++.+   ++++++.+.
T Consensus       374 ~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~  415 (511)
T 3vp6_A          374 KFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF  415 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESS
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence            899999999999999888888777665554   445555543

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=100.00  E-value=3.9e-34  Score=294.23  Aligned_cols=314  Identities=21%  Similarity=0.360  Sum_probs=252.9

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCA  185 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la  185 (435)
                      .+|+.+.+++++++.+.+.+..+.+.... ..++......|.+.+++.+.+..    +..+++.+|...++|.+++++++
T Consensus        31 ~~p~~~~~~~~~~~~~~~~i~l~gnp~~~-l~s~~t~~~~~~v~~~l~~~~~~----~~~~~~~~p~~~~le~~~~~~la  105 (502)
T 3hbx_A           31 KMPENSIPKEAAYQIINDELMLDGNPRLN-LASFVTTWMEPECDKLIMSSINK----NYVDMDEYPVTTELQNRCVNMIA  105 (502)
T ss_dssp             SCCSSCCCHHHHHHHHHHHGGGSCCGGGB-TTCCSCCCCCHHHHHHHHHTTTC----BTTCTTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhccCCCCCce-eccccCCCCCHHHHHHHHHHhcc----CCCChhcChhHHHHHHHHHHHHH
Confidence            67899999999999999887654321110 11111223367788887776654    45566778999999999999999


Q ss_pred             HHhCCC--CC--CceEEcCChHHHHHHHHHHHHHHhhhh---cC--CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        186 RMFNGG--PE--TCGCMTSGGTESIMMACKAYRDYAREE---KG--ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       186 ~l~g~~--~~--~~~~~t~ggteai~~a~~a~~~~~~~~---~g--~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                      +++|.+  ++  ..+++|+|||+|+.+++.+++.+...+   .|  ..+++|++++++|.++.++++..|++++.||+++
T Consensus       106 ~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~  185 (502)
T 3hbx_A          106 HLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE  185 (502)
T ss_dssp             HHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT
T ss_pred             HHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC
Confidence            999998  33  234579999999999999987663211   13  3456899999999999999999999999999985


Q ss_pred             C-ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc------CCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        257 S-YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY------GIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       257 ~-~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~------~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      + +.+|+++++++++++|++|++++|+||||.++|+++|.++|+++      |+++|+|++|++++.+|...    ..++
T Consensus       186 ~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~----~~~~  261 (502)
T 3hbx_A          186 GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYP----ELEW  261 (502)
T ss_dssp             TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT----TCCC
T ss_pred             CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCc----cccc
Confidence            4 89999999999999999999999999999999999999999999      99999999999988665421    2256


Q ss_pred             CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHH
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV  409 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~  409 (435)
                      ++...++|++++++|||+++|.|+|++++++++.....+...+.|.++.....++.++|++..++++|++++.+|.+++.
T Consensus       262 ~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~  341 (502)
T 3hbx_A          262 DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYR  341 (502)
T ss_dssp             STTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence            67678999999999999999999999999988776555555678888776667788999998888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCC
Q psy10210        410 WICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       410 ~~~~~~~~~~~~~~~~l~~  428 (435)
                      ++.++..+..+.+.+.|.+
T Consensus       342 ~~~~~~~~~a~~l~~~L~~  360 (502)
T 3hbx_A          342 NVMENCRENMIVLREGLEK  360 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            8888877776665555443

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=100.00  E-value=4.5e-34  Score=292.78  Aligned_cols=323  Identities=13%  Similarity=0.100  Sum_probs=238.2

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +...+|+.+.+.+++++.+.+.+..+...|.++.+.+..+.+ +.....+.+++......+..++..+|...++|.++++
T Consensus        42 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~  120 (486)
T 1js3_A           42 IPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTA-SSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD  120 (486)
T ss_dssp             SCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCC-CCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCCC-CCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHH
Confidence            445779999999999999999887777778777666555544 2223333444433334456677778999999999999


Q ss_pred             HHHHHhCCCCC--------CceEEcCChHHHHHHHHHHHHHHhhhh---c-CC-------CCCeEEEeCCCchhHHHHHH
Q psy10210        183 MCARMFNGGPE--------TCGCMTSGGTESIMMACKAYRDYAREE---K-GI-------SLPEIVLPTTAHPAFDKAAN  243 (435)
Q Consensus       183 ~la~l~g~~~~--------~~~~~t~ggteai~~a~~a~~~~~~~~---~-g~-------~~~~viv~~~~~~~~~~~~~  243 (435)
                      ++++++|.+.+        .++++|+|||+|+.+++.++++....+   . |.       ++..|++++++|+++.++++
T Consensus       121 ~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~  200 (486)
T 1js3_A          121 WLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGL  200 (486)
T ss_dssp             HHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHH
T ss_pred             HHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHH
Confidence            99999999742        368999999999999999987542110   0 10       11237889999999999999


Q ss_pred             HcCCEEEEEecCCCccccHHHHHHHhhcCc------eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhh
Q psy10210        244 YFGMKVKHIRLTSSYTVDLAALQSAITGNT------VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP  317 (435)
Q Consensus       244 ~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~------~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~  317 (435)
                      ..|++++.||+++++.+|+++|+++|++++      .+|++++|+||+|.++|+++|+++|++||+++|+|++|+++.+.
T Consensus       201 ~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~  280 (486)
T 1js3_A          201 IGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFI  280 (486)
T ss_dssp             HHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGG
T ss_pred             hCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHH
Confidence            999999999998889999999999998766      48999999999999999999999999999999999999988753


Q ss_pred             cccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC---------CCCCCccccCC
Q psy10210        318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG---------NYGSPSVSGSR  388 (435)
Q Consensus       318 ~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg---------~~~~~~~~gsr  388 (435)
                      ..+..     ..-....++|++++++||++++|.|+|+++++++..........+.|..+         .+...++.++|
T Consensus       281 ~~~~~-----~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r  355 (486)
T 1js3_A          281 CPEFR-----HLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR  355 (486)
T ss_dssp             STTTG-----GGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCC
T ss_pred             CHHHH-----HHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCC
Confidence            21110     00011246899999999998889999999998876432222222333211         12234556777


Q ss_pred             CchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH---HHhcCCcccc
Q psy10210        389 SGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSC---LQNLSDLWLY  432 (435)
Q Consensus       389 ~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~---~~~l~~l~~~  432 (435)
                      ++.. .++|++++.+|.+++.+.+++..+..+.+   ++++++++.+
T Consensus       356 r~~~-~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  401 (486)
T 1js3_A          356 RFRS-LKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVC  401 (486)
T ss_dssp             CCTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC
T ss_pred             chhH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            7765 48999999999999988887776665544   4445565554

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=100.00  E-value=4e-33  Score=287.06  Aligned_cols=321  Identities=19%  Similarity=0.172  Sum_probs=241.2

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +...+|+.+.+.+++++.+++.+......| ++.+.+..+.+ ......+.+++......|...++.+|...++|.++++
T Consensus        62 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~  139 (504)
T 2okj_A           62 FNLELSDHPESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTG-LDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLK  139 (504)
T ss_dssp             BCCCCCSSCCCHHHHHHHHHHHHHTSCCTT-CTTEESSSSCC-CCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHhhccCCCC-CCCEEEEccCC-CCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHH
Confidence            456789899999999999988776544444 44443333433 1223334455555545566778888999999999999


Q ss_pred             HHHHHhCCCC-CCceEEcCChHHHHHHHHHHHHHHhh---hhcCC---CCCeEEEeCCCchhHHHHHHHcCC---EEEEE
Q psy10210        183 MCARMFNGGP-ETCGCMTSGGTESIMMACKAYRDYAR---EEKGI---SLPEIVLPTTAHPAFDKAANYFGM---KVKHI  252 (435)
Q Consensus       183 ~la~l~g~~~-~~~~~~t~ggteai~~a~~a~~~~~~---~~~g~---~~~~viv~~~~~~~~~~~~~~~g~---~v~~v  252 (435)
                      ++++++|.+. ..++++|+|||+|+.+++.++++...   .++|.   ++.+|++++++|+++.++++..|.   +++.|
T Consensus       140 ~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v  219 (504)
T 2okj_A          140 KMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI  219 (504)
T ss_dssp             HHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE
T ss_pred             HHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEE
Confidence            9999999973 34899999999999999999876321   01232   123799999999999999999987   89999


Q ss_pred             ecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      |+++++.+|+++|++++++      +|++|++++|+||+|.++++++|+++|++||+|+|+|++|+++.+...+.     
T Consensus       220 ~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~-----  294 (504)
T 2okj_A          220 KCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKH-----  294 (504)
T ss_dssp             CBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTT-----
T ss_pred             ecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhh-----
Confidence            9988899999999999976      58999999999999999999999999999999999999999987642110     


Q ss_pred             CCCCCC-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-C--------CCCCccccCCCchHHHHH
Q psy10210        327 PPFDFS-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-N--------YGSPSVSGSRSGGIIATC  396 (435)
Q Consensus       327 ~~~d~~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-~--------~~~~~~~gsr~~~~ia~~  396 (435)
                       ...+. ..++|++++++|||+++|.|+|+++++++++.+......+.|..+ .        ++..++.++|++..+ .+
T Consensus       295 -~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l-~~  372 (504)
T 2okj_A          295 -RHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIF-KF  372 (504)
T ss_dssp             -GGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHH-HH
T ss_pred             -HhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHH-HH
Confidence             11222 136899999999998889999999999876544322223444421 1        233455777877654 88


Q ss_pred             HHHHHHhcHHHHHHHHHHHHHHHHHHHHhc---CCcccc
Q psy10210        397 WAAMMYFGFEAQVWICVRYHFNYKSCLQNL---SDLWLY  432 (435)
Q Consensus       397 ~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l---~~l~~~  432 (435)
                      |++++.+|.+++.+.+++..+..+.+.+.|   ++++.+
T Consensus       373 ~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  411 (504)
T 2okj_A          373 WLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV  411 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            999999999999888887777666665554   444444

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=100.00  E-value=3.4e-33  Score=288.29  Aligned_cols=319  Identities=18%  Similarity=0.173  Sum_probs=235.1

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM  183 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  183 (435)
                      ...+|+.+.+.+++++.+++.+..+...| ++.+....+.+ ......+.+++......+...++.+|+..++|.+++++
T Consensus        79 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~  156 (515)
T 2jis_A           79 DLELRSQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSG-LDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRK  156 (515)
T ss_dssp             CCCCCSSCCCHHHHHHHHHHHHHHSCCTT-STTEESSSCCC-CCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhcCCCCCC-CCCeEEEeeCC-CCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHH
Confidence            34689889999999999988776554434 33333333333 11222333555544445556788889999999999999


Q ss_pred             HHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhh---hhcC---CCCCeEEEeCCCchhHHHHHHHcCC---EEEEEec
Q psy10210        184 CARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR---EEKG---ISLPEIVLPTTAHPAFDKAANYFGM---KVKHIRL  254 (435)
Q Consensus       184 la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~---~~~g---~~~~~viv~~~~~~~~~~~~~~~g~---~v~~vp~  254 (435)
                      +++++|.++ .++++|+|||+|+.+++.+++....   ..+|   .++.+|++++++|+++.++++..|.   +++.+|+
T Consensus       157 la~l~g~~~-~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~  235 (515)
T 2jis_A          157 LRALVGWSS-GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA  235 (515)
T ss_dssp             HHHHHTCSS-CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB
T ss_pred             HHHHhCCCC-CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEec
Confidence            999999974 4899999999999999999875310   0012   2234799999999999999999988   8999999


Q ss_pred             CCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      ++++.+|+++|++++++      ++++|++++++|++|.++|+++|.++|++||+++|+|++|+++.++..+.      .
T Consensus       236 ~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~------~  309 (515)
T 2jis_A          236 DERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTH------R  309 (515)
T ss_dssp             CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTT------G
T ss_pred             CCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhh------H
Confidence            88899999999999976      48999999999999999999999999999999999999999988743210      0


Q ss_pred             CCCCC-CCccEEEecCCCCCCccCCcEEEEEeCC-ccccccccccCCCC-CC--------CCCCCccccCCCchHHHHHH
Q psy10210        329 FDFSL-PGVTSISVDTHKYGFTPKGSSVVLYRDL-KYKHCQYFVTSDWP-GG--------NYGSPSVSGSRSGGIIATCW  397 (435)
Q Consensus       329 ~d~~~-~gvd~~~~s~hK~~~~p~g~g~il~~~~-~~~~~~~~~~~~~~-gg--------~~~~~~~~gsr~~~~ia~~~  397 (435)
                      ..+.. .++|++++|+|||+++|.|+|+++++++ ++.+..+...+.|. ++        .++++++.++|+...+ ++|
T Consensus       310 ~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al-~~~  388 (515)
T 2jis_A          310 HLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCL-KLW  388 (515)
T ss_dssp             GGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHH-HHH
T ss_pred             hhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHH-HHH
Confidence            11221 2679999999999888999999999987 55433222223333 11        1344566777777654 889


Q ss_pred             HHHHHhcHHHHHHHHHHHHHHHHHHHH---hcCCcccc
Q psy10210        398 AAMMYFGFEAQVWICVRYHFNYKSCLQ---NLSDLWLY  432 (435)
Q Consensus       398 a~l~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l~~~  432 (435)
                      ++++.+|.+++.+.+++..+..+.+.+   ++++++.+
T Consensus       389 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~  426 (515)
T 2jis_A          389 LMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV  426 (515)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            999999999988877777666555544   44555544

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=2.1e-32  Score=271.31  Aligned_cols=311  Identities=27%  Similarity=0.436  Sum_probs=238.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC-ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY-YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMC  184 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l  184 (435)
                      .+|+.+.+++++++.+.+.... ...|.++.+.+.... ..|++.+++.+.+...    ..++..+++..+++.++++++
T Consensus         4 ~lp~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l   78 (397)
T 3f9t_A            4 NMQEKGVSEKEILEELKKYRSL-DLKYEDGNIFGSMCSNVLPITRKIVDIFLETN----LGDPGLFKGTKLLEEKAVALL   78 (397)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHTT-SCCGGGTCBCSCSCCCCCTHHHHHHHHHTTCC----TTSGGGBHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHhhcc-CCCCCCCCeEEEecCCCcHHHHHHHHHHHhhc----CCCcccChhHHHHHHHHHHHH
Confidence            5788899999999999987654 344444333333333 3678888888776542    223345678899999999999


Q ss_pred             HHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh--hcC---CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE--EKG---ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       185 a~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~--~~g---~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      ++++|.+++ ++++|+||++|+.+++++++.+...  .+|   .++++|++++++|+++..+++..|++++.+|+++++.
T Consensus        79 a~~~~~~~~-~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~  157 (397)
T 3f9t_A           79 GSLLNNKDA-YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYT  157 (397)
T ss_dssp             HHHTTCTTC-EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSS
T ss_pred             HHHhCCCCC-CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCc
Confidence            999999765 8999999999999999999876211  011   1245699999999999999999999999999998899


Q ss_pred             ccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC----CCCCCCCCC
Q psy10210        260 VDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP----LPPFDFSLP  334 (435)
Q Consensus       260 ~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~----~~~~d~~~~  334 (435)
                      +|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+++..++.+. +..    ..++++.. 
T Consensus       158 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~~~~-  235 (397)
T 3f9t_A          158 IDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDD-KYKKKGVNYKFDFSL-  235 (397)
T ss_dssp             BCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCG-GGCCTTCCCCCSGGG-
T ss_pred             CCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccc-ccccccccccccccc-
Confidence            999999999998 99999999999999999999999999999999999999999987765432 111    12566666 


Q ss_pred             CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                      ++|+++.++||++++|.++|+++++++.+.+......+.+.++.  .....+++++..++++++++..++.+++.++.++
T Consensus       236 ~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  313 (397)
T 3f9t_A          236 GVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTETR--QATILGTRVGFGGACTYAVLRYLGREGQRKIVNE  313 (397)
T ss_dssp             TCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCEECTTSSSSE--ECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEccccccCCCCCceEEEEeCHHHHHhhccCCccccCCC--ccccccccccchHHHHHHHHHHHhHHHHHHHHHH
Confidence            89999999999987888999988888776644322222222221  2334577887777888999888887777766666


Q ss_pred             HHHHHHHHHHhc
Q psy10210        415 YHFNYKSCLQNL  426 (435)
Q Consensus       415 ~~~~~~~~~~~l  426 (435)
                      ..+..+.+.+.|
T Consensus       314 ~~~~~~~l~~~L  325 (397)
T 3f9t_A          314 CMENTLYLYKKL  325 (397)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            655544444433

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.1e-31  Score=275.72  Aligned_cols=314  Identities=19%  Similarity=0.190  Sum_probs=230.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCC--hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYY--QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM  183 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  183 (435)
                      .+|+.+.+.+++++.+.+.+..+..+|.++.+.+....+  .+.+.+.+.....   +.+...++.+|...++|.+++++
T Consensus        72 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~---n~~~~~~~~~~~~~~le~~~~~~  148 (497)
T 2qma_A           72 DLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAAL---NQSMDSWDQASSATYVEQKVVNW  148 (497)
T ss_dssp             CSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHH---CCCTTCGGGCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhh---cccccchhhChHHHHHHHHHHHH
Confidence            358889999999999998877777777665544444333  4444444433222   33455667788999999999999


Q ss_pred             HHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh--------hcCCC----CCeEEEeCCCchhHHHHHHHcCC---E
Q psy10210        184 CARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE--------EKGIS----LPEIVLPTTAHPAFDKAANYFGM---K  248 (435)
Q Consensus       184 la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~--------~~g~~----~~~viv~~~~~~~~~~~~~~~g~---~  248 (435)
                      +++++|.++.+++++|+|||+|+.+++.++++....        ..|.+    +.+|+++.++|+++.++++..|.   +
T Consensus       149 la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~  228 (497)
T 2qma_A          149 LCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKA  228 (497)
T ss_dssp             HHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred             HHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCccc
Confidence            999999976468999999999999999997643210        12332    23799999999999999999977   8


Q ss_pred             EEEEecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      ++.+|+++++.+|+++|+++++++      +.+|++++++||+|.++++++|.++|++||+++|+|++|+++..+..   
T Consensus       229 v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~---  305 (497)
T 2qma_A          229 VMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS---  305 (497)
T ss_dssp             EEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST---
T ss_pred             EEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc---
Confidence            999999988999999999999764      44899999999999999999999999999999999999999876421   


Q ss_pred             CCCCCCCCCC-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC------CCCCCccccCCCchHHHH
Q psy10210        323 GYPLPPFDFS-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG------NYGSPSVSGSRSGGIIAT  395 (435)
Q Consensus       323 g~~~~~~d~~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg------~~~~~~~~gsr~~~~ia~  395 (435)
                       +   ..... ..++|++++|+|||+++|.++|+++++++...+.. .....|..+      .+...++.++|+..++ +
T Consensus       306 -~---~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al-~  379 (497)
T 2qma_A          306 -H---KSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFKFL-LHHADYLNREHDELPNLVDKSIATTKRFDAL-K  379 (497)
T ss_dssp             -T---GGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGGGG-CC--------------------CCSCCCTHH-H
T ss_pred             -c---hHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHHHh-cCCchhcCCccccCCCccccCCCCCCchhHH-H
Confidence             0   00011 12579999999999999999999999988754322 112223211      1223345677877664 7


Q ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHHHHHH---hcCCccc
Q psy10210        396 CWAAMMYFGFEAQVWICVRYHFNYKSCLQ---NLSDLWL  431 (435)
Q Consensus       396 ~~a~l~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l~~  431 (435)
                      +|++++.+|.+++.+.+++..+..+.+.+   +++++..
T Consensus       380 ~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  418 (497)
T 2qma_A          380 VFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFEL  418 (497)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence            89999999999888887776666555544   4445444

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.96  E-value=4.2e-29  Score=253.86  Aligned_cols=287  Identities=17%  Similarity=0.181  Sum_probs=208.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHH-HhhcC----------CCCCCCCcChhHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVF-GLTSY----------TNPLHPDIFPGVC  174 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~-~~~~~----------~~~~~~~~~~~~~  174 (435)
                      .+|+.+.+++++.+...++...+...|.+....+ +.  .+.+.+++.... ..+..          .|+ .+...|...
T Consensus        57 ~lp~~g~~~~~i~~~~~~~~~~~~~~yld~aa~~-~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  132 (456)
T 2z67_A           57 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIG-ER--EARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMY  132 (456)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECS-SC--CCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhccccccccccccc-cc--cccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHH
Confidence            5788899999999888887665555555332222 11  234444444321 11111          122 223334688


Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChH-HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggt-eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      +++.++++++++++|.+++  +++|+||| .++.+++.+++...      ++++|++++++|+++.++++..|++++.+|
T Consensus       133 ~~~~~~~~~la~~~g~~~~--~~~t~g~te~a~~~al~~~~~~~------~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~  204 (456)
T 2z67_A          133 ALTNKILESFFKQLGLNVH--AIATPISTGMSISLCLSAARKKY------GSNVVIYPYASHKSPIKAVSFVGMNMRLVE  204 (456)
T ss_dssp             HHHHHHHHHHHHHTTCCCE--EEEESSCHHHHHHHHHHHHHHHH------CCCEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCC--EEEeCcHHHHHHHHHHHHHHHhc------CCCEEEEECCCcHHHHHHHHHcCCCceEEE
Confidence            9999999999999999763  99999999 56666777765421      134689999999999999999999999998


Q ss_pred             c---CCCccccHHHHHHHh-h----cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        254 L---TSSYTVDLAALQSAI-T----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       254 ~---~~~~~~d~~~l~~~i-~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +   ++++.+|++++++++ +    .++.+|++++||||+|.++|+++|.++|++||+++|+|+||+++...+.      
T Consensus       205 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~------  278 (456)
T 2z67_A          205 TVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYL------  278 (456)
T ss_dssp             CEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHH------
T ss_pred             EeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhh------
Confidence            7   677899999999999 5    3778888999999999999999999999999999999999987765321      


Q ss_pred             CCCCCC---CCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        326 LPPFDF---SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       326 ~~~~d~---~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                        +.+.   .. ++|++++|+|||+++|.|+|+++++++++.+..   .+.|.|+          +++...+++|+++..
T Consensus       279 --~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l---~~~~~g~----------~~~~~~~~~~aal~~  342 (456)
T 2z67_A          279 --EKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSYPGR----------ASATPVVNTLVSLLS  342 (456)
T ss_dssp             --HHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HTTSCSC----------BCSHHHHHHHHHHHH
T ss_pred             --HHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhc---CcCCCCC----------CCCCHHHHHHHHHHH
Confidence              1111   11 689999999999889999999888777665432   3444432          233335688999999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ++.+++.+..++..+..+.+.+.|
T Consensus       343 l~~~~~~~~~~~~~~~~~~l~~~L  366 (456)
T 2z67_A          343 MGSKNYLELVKNQKNSKKLLDELL  366 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            988888776666655555444433

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.96  E-value=1.6e-26  Score=236.01  Aligned_cols=300  Identities=17%  Similarity=0.130  Sum_probs=214.4

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccCChHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHH
Q psy10210        105 LELPSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIK  182 (435)
Q Consensus       105 ~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~  182 (435)
                      ..+|  +.++.++++.+.+...++...+... .+++......|++.+++.+.   +...+|++++ .+++..+++.++++
T Consensus        40 ~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v~~~~~~~---~~~~~~~~~~~~~~g~~~l~~~l~~  114 (474)
T 1wyu_B           40 PRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARL---FADLHPYQDPRTAQGALRLMWELGE  114 (474)
T ss_dssp             CCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHT---TSSCCTTSCGGGCHHHHHHHHHHHH
T ss_pred             CCCC--CCCHHHHHHHHHHHHhCCCCcccCccccccccccCCHHHHHHHHHH---HHhcCCCCchhhChHHHHHHHHHHH
Confidence            3678  5999999999999887654322111 12222233467777777665   3344788776 68999999999999


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC--CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG--ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV  260 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g--~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~  260 (435)
                      ++++++|.+.  .+++|+||++|+.+++++++..... +|  .++++|++++++|+++..+++..|++++.+|+++++.+
T Consensus       115 ~la~~~g~~~--~~~~~~ggt~a~~~al~~~~~~~~~-~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~  191 (474)
T 1wyu_B          115 YLKALTGMDA--ITLEPAAGAHGELTGILIIRAYHED-RGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEV  191 (474)
T ss_dssp             HHHHHHTCSE--EECCCSSHHHHHHHHHHHHHHHHHH-TTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSB
T ss_pred             HHHHHHCCCc--eeecChHHHHHHHHHHHHHHHHHHh-cCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCc
Confidence            9999999864  4778899999999988887643221 23  23568999999999999999999999999999888999


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEE
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSI  339 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~  339 (435)
                      |+++|++++++++++|++++| ||+|.+ +++++|.++|++||+++|+|++|+.+..      |    ..+....|+|++
T Consensus       192 d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~------g----~~~~~~~g~di~  260 (474)
T 1wyu_B          192 DLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIM------G----WARPGDMGFDVV  260 (474)
T ss_dssp             CHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT------T----TCCHHHHTCSEE
T ss_pred             CHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhc------c----CCCcccCCCcEE
Confidence            999999999999999999998 579999 7999999999999999999999976543      1    112223368999


Q ss_pred             EecCCCCCCccC-----CcEEEEEeCCccccccc-c----------ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        340 SVDTHKYGFTPK-----GSSVVLYRDLKYKHCQY-F----------VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       340 ~~s~hK~~~~p~-----g~g~il~~~~~~~~~~~-~----------~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      ++|+||++++|.     |+|+++++++ +.+... .          ....+........  .++.+....+++|+.++.+
T Consensus       261 ~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~~~l~~~  337 (474)
T 1wyu_B          261 HLNLHKTFTVPHGGGGPGSGPVGVKAH-LAPYLPVPLVERGEEGFYLDFDRPKSIGRVR--SFYGNFLALVRAWAYIRTL  337 (474)
T ss_dssp             ECCTTTTTCCCCTTSCCCCCCEEECGG-GGGGCCSCEEEECSSCEEEECCCTTCCCCSS--STTSCHHHHHHHHHHHHHH
T ss_pred             EEeCccccccCCCCCCCCeEEEEEcHH-HHHhCCCCeeeccCCeeEecccCcccCcccc--cCcCcHHHHHHHHHHHHHH
Confidence            999999877775     6899787764 332211 0          0000110000000  1122334556788888888


Q ss_pred             cHHHHHHHHHHHH---HHHHHHHHhc
Q psy10210        404 GFEAQVWICVRYH---FNYKSCLQNL  426 (435)
Q Consensus       404 g~~g~~~~~~~~~---~~~~~~~~~l  426 (435)
                      |.+++.+..++..   +++.+.++++
T Consensus       338 g~~~l~~~~~~~~~~~~~l~~~L~~~  363 (474)
T 1wyu_B          338 GLEGLKKAAALAVLNARYLKELLKEK  363 (474)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            8888855555444   4444444443

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.95  E-value=1.5e-27  Score=237.78  Aligned_cols=290  Identities=13%  Similarity=0.115  Sum_probs=209.2

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHhCCCCCCC--------CCccccc--------ccCChHhHHHHHHHHHHhhcCCCCCCCC
Q psy10210        105 LELPSQGRNRLEILELVSNYLARGHYDWK--------HGRVSGA--------VYYYQQDLVDLLTEVFGLTSYTNPLHPD  168 (435)
Q Consensus       105 ~~~P~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~--------~~~g~~~l~~~i~~~~~~~~~~~~~~~~  168 (435)
                      ..+|++|++.++|...+.+....+.++|.        +|++.+.        .++|.-...    +++..    |+ ...
T Consensus        21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~~~~~----d~l~~----~~-~~~   91 (450)
T 3bc8_A           21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSG----DISAV----QP-KAA   91 (450)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBCC---------------CC-SBH
T ss_pred             ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecchhHHH----HHHHh----Cc-ccc
Confidence            35799999999999999998888777775        4555554        333331111    22222    44 444


Q ss_pred             cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH-HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC
Q psy10210        169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM  247 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt-eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~  247 (435)
                      ..|...+++..+..++.+++|.+....+++++|+| .++.+++.+++....     +++.|+++..+|.++.+++...|+
T Consensus        92 ~~~~~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~-----~~~~viv~r~aHkSv~kAl~l~Gl  166 (450)
T 3bc8_A           92 GSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRP-----KAKYIIWPRIDQKSCFKSMVTAGF  166 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCT-----TCCEEEEECCCCHHHHHHHHHTTC
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhc-----CCCEEEEECCcHHHHHHHHHHcCC
Confidence            56778899999999999999998776679999998 555555555554211     135699999999999999999999


Q ss_pred             EEEEEec---CCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccc
Q psy10210        248 KVKHIRL---TSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMS  320 (435)
Q Consensus       248 ~v~~vp~---~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~  320 (435)
                      +++.|+.   ++.+.+|+++++++|++    ++.+|+.+..++.+|.++|+++|+++|++||+|+|||+|||+....+..
T Consensus       167 ~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~  246 (450)
T 3bc8_A          167 EPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMH  246 (450)
T ss_dssp             EEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH
T ss_pred             eeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHh
Confidence            9998865   46788999999999965    4456666666666778999999999999999999999999976442110


Q ss_pred             ccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHH
Q psy10210        321 AAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAM  400 (435)
Q Consensus       321 ~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l  400 (435)
                      .     +.-.+...++|+++.|+|||+++|.|+|++++++++..+..   ...|.+..        |  ......+|+++
T Consensus       247 l-----~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~---~~~~~g~~--------s--~SpsL~l~~~l  308 (450)
T 3bc8_A          247 L-----IQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDI---SKMYPGRA--------S--ASPSLDVLITL  308 (450)
T ss_dssp             H-----HHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHH---HHHSCSCB--------C--SHHHHHHHHHH
T ss_pred             H-----HHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHH---HHHhhcCC--------c--ccHHHHHHHHH
Confidence            0     00011114789999999999999999999999887765442   23333221        1  11125899999


Q ss_pred             HHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        401 MYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       401 ~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+|.++|.+.+++..+.++++.+++
T Consensus       309 ~~~G~~g~~~~i~~~~~~a~~l~~~l  334 (450)
T 3bc8_A          309 LSLGCSGYRKLLKERKEMFVYLSTQL  334 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999877766655554443

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.95  E-value=1.3e-26  Score=228.49  Aligned_cols=259  Identities=17%  Similarity=0.202  Sum_probs=187.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC-CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH-PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYARE  219 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~~  219 (435)
                      ++.+.+++.+.+... +.++.. ........+...++++++++++|.+++ ++++|+|+++|+.++++++.    ++++.
T Consensus        13 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~~~a~~~~~~~~~~~~~~~gd~   90 (382)
T 4hvk_A           13 DERILEAMLPYMTES-FGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFTSGATEANNLAIIGYAMRNARKGKH   90 (382)
T ss_dssp             CHHHHHHHHHHHHTS-CCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE-EEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             CHHHHHHHHHHHHhh-cCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEECCchHHHHHHHHHhhhhhcCCCCE
Confidence            567777777776652 223322 111234567888999999999998764 89999999999999999987    55555


Q ss_pred             hcCCCCCeEEEeCCCchhHHHHHHH---cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPAFDKAANY---FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAK  296 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~~~~~~~---~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~  296 (435)
                              |++++++|+++...+..   .|++++.+|+++++.+|++++++++++++++|++++|+||||.+.++++|.+
T Consensus        91 --------vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~  162 (382)
T 4hvk_A           91 --------ILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISE  162 (382)
T ss_dssp             --------EEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHH
T ss_pred             --------EEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHH
Confidence                    99999999998877665   5999999999988899999999999999999999999999999999999999


Q ss_pred             HHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210        297 LGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG  376 (435)
Q Consensus       297 la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g  376 (435)
                      +|++||+ +|+|++++....           +++....++|+++.|+||+ ++|.|+|+++++++...      .+.+.+
T Consensus       163 l~~~~~~-li~D~a~~~~~~-----------~~~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~------~~~~~~  223 (382)
T 4hvk_A          163 VLAGKAA-LHIDATASVGQI-----------EVDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKL------QPVILG  223 (382)
T ss_dssp             HHSSSSE-EEEECTTTBTTB-----------CCCHHHHTCSEEEEESGGG-TSCTTCEEEEEETTCCC------CCSSCS
T ss_pred             HHHHcCE-EEEEhHHhcCCC-----------CCCchhcCCCEEEEeHHHh-cCCCceEEEEEcCccCc------Cccccc
Confidence            9999999 999999864322           3444445789999999997 68889999888876421      122222


Q ss_pred             CCCCCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        377 GNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       377 g~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      +........++.+...++++.+++..+  +.+...++.++..+.+.+.+++++++..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  281 (382)
T 4hvk_A          224 GGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLN  281 (382)
T ss_dssp             SCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred             CCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            211111112333444444555555533  22445555555666666666666665544

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.95  E-value=3.5e-26  Score=229.36  Aligned_cols=240  Identities=21%  Similarity=0.207  Sum_probs=179.6

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc---CCE
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMK  248 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~---g~~  248 (435)
                      ...+...++++++++++|.+++ ++++|+|||+|+.++++++.+....    ++++|++++++|+++..++...   |++
T Consensus        65 ~~~~~~~~l~~~la~~~~~~~~-~v~~~~ggt~a~~~a~~~l~~~~~~----~gd~Vl~~~~~~~~~~~~~~~~~~~g~~  139 (423)
T 3lvm_A           65 QAEEAVDIARNQIADLVGADPR-EIVFTSGATESDNLAIKGAANFYQK----KGKHIITSKTEHKAVLDTCRQLEREGFE  139 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHHHHHTT----TCCEEEEETTSCHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHcCCCCC-eEEEeCChHHHHHHHHHHHHHhhcc----CCCEEEECCccchHHHHHHHHHHHcCCE
Confidence            3456677888999999998764 8999999999999999998752110    1235999999999988887544   999


Q ss_pred             EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      ++.+|+++++.+|++++++++++++++|++++++||||.+.++++|.++|++||+++|+|++|+....           +
T Consensus       140 ~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----------~  208 (423)
T 3lvm_A          140 VTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKL-----------P  208 (423)
T ss_dssp             EEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----------C
T ss_pred             EEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCC-----------C
Confidence            99999998899999999999999999999999999999999999999999999999999999875432           3


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH--H
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF--E  406 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~--~  406 (435)
                      ++....++|+++.|+||+ ++|.|+|+++.+++.....    .+...++........++.+...++++.+++..+..  +
T Consensus       209 ~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~  283 (423)
T 3lvm_A          209 IDLSQLKVDLMSFSGHKI-YGPKGIGALYVRRKPRVRI----EAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMA  283 (423)
T ss_dssp             CCTTTSCCSEEEEESTTT-TSCSSCEEEEECBTTBCCC----CCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cChhhcCCCEEEechHHh-cCCCCeEEEEEeccccCCC----CccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            455556789999999996 7888899977765433221    22222222211122334444455555566655533  5


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        407 AQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      .+.++.++..+.+.+.+++++++..+
T Consensus       284 ~~~~~~~~~~~~l~~~L~~~~~~~~~  309 (423)
T 3lvm_A          284 TEMERLRGLRNRLWNGIKDIEEVYLN  309 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            66666677777777777777666544

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.95  E-value=4.7e-26  Score=227.28  Aligned_cols=241  Identities=10%  Similarity=0.039  Sum_probs=184.3

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcCC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFGM  247 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~  247 (435)
                      .+...++..++++++++++|.+++..+++|+||++|+.++++++.++++.        |++++++|++  +...++..|+
T Consensus        41 ~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~g~  112 (411)
T 3nnk_A           41 DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDK--------VLVPVFGRFGHLLCEIARRCRA  112 (411)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCE--------EEEEECSHHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCE--------EEEecCCchHHHHHHHHHHcCC
Confidence            45566778889999999999887645889999999999999999766665        9999999988  8889999999


Q ss_pred             EEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        248 KVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       248 ~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      +++.+|++.++.+|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++++....          
T Consensus       113 ~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~----------  182 (411)
T 3nnk_A          113 EVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGN----------  182 (411)
T ss_dssp             EEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTB----------
T ss_pred             eEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCc----------
Confidence            999999988888999999999986 899999999999999999999999999999999999999864322          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc---cccccCCCCCCCCCC----------------------
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC---QYFVTSDWPGGNYGS----------------------  381 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~---~~~~~~~~~gg~~~~----------------------  381 (435)
                       +++....++|+++.|+||++++|.|+|+++.+++ +.+.   .....+.|.|+....                      
T Consensus       183 -~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~  260 (411)
T 3nnk_A          183 -PLETDVWGLDAVSAGMQKCLGGPSGTSPITLSAR-MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGP  260 (411)
T ss_dssp             -CCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHH-HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHST
T ss_pred             -ccchhccCCcEEEecCccccCCCCceEEEEECHH-HHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhcc
Confidence             4566667899999999998788999999776654 3221   111234454443211                      


Q ss_pred             -CccccCCCchHHHHHHHHHHHhcHH---HHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        382 -PSVSGSRSGGIIATCWAAMMYFGFE---AQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       382 -~~~~gsr~~~~ia~~~a~l~~~g~~---g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                       ....++.+...++++.+++..+..+   ...++.++..+.+.+.++++ ++..
T Consensus       261 ~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~  313 (411)
T 3nnk_A          261 ERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLET  313 (411)
T ss_dssp             TCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence             1122344555555666666665444   55566666666666666654 4443

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.95  E-value=6.3e-26  Score=223.97  Aligned_cols=259  Identities=17%  Similarity=0.196  Sum_probs=183.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC-CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH-PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYARE  219 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~~  219 (435)
                      ++.+++++.+.+... +.++.. +...+...+...++++++++++|.+++ ++++|+|||+|+.+++.++.    ++++.
T Consensus        13 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~l~~~~~~~gd~   90 (382)
T 4eb5_A           13 DERILEAMLPYMTES-FGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFTSGATEANNLAIIGYAMRNARKGKH   90 (382)
T ss_dssp             CHHHHHHHHHHHHTS-CCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE-EEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             CHHHHHHHHHHHHhc-cCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEcCchHHHHHHHHHHHHhhccCCCCE
Confidence            677788887777642 233322 111234567888899999999998654 89999999999999999997    55554


Q ss_pred             hcCCCCCeEEEeCCCchhHHHHHHH---cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPAFDKAANY---FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAK  296 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~~~~~~~---~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~  296 (435)
                              |++++++|+++...+..   .|++++.+|+++++.+|++++++++++++++|++++|+||||.+.++++|.+
T Consensus        91 --------Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~  162 (382)
T 4eb5_A           91 --------ILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISE  162 (382)
T ss_dssp             --------EEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHH
T ss_pred             --------EEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHH
Confidence                    99999999998877764   6999999999888889999999999989999999999999999999999999


Q ss_pred             HHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210        297 LGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG  376 (435)
Q Consensus       297 la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g  376 (435)
                      +|++||++ |+|++|+....           ++++...++|+++.|+||+ ++|.|+|+++++++...      .+.+.+
T Consensus       163 l~~~~~~~-i~D~a~~~g~~-----------~~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~l------~~~~~~  223 (382)
T 4eb5_A          163 VLAGKAAL-HIDATASVGQI-----------EVDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKL------QPVILG  223 (382)
T ss_dssp             HHTTSSEE-EEECTTTBTTB-----------CCCHHHHTCSEEEEETGGG-TCCSSCEEEEEETTCCC------CCSSCS
T ss_pred             HHHHCCCE-EEEcchhcCCc-----------ccCccccCCCEEEeehHHh-cCCCceEEEEEcccccc------CceecC
Confidence            99999999 99999973211           2333333689999999998 78889999888776311      111222


Q ss_pred             CCCCCCccccCCCchHHHHHHHHHHHhcH--HHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        377 GNYGSPSVSGSRSGGIIATCWAAMMYFGF--EAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       377 g~~~~~~~~gsr~~~~ia~~~a~l~~~g~--~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      +........++.+...++++.+++..+..  +...++.++..+.+.+.+++++++..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  281 (382)
T 4eb5_A          224 GGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLN  281 (382)
T ss_dssp             SCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred             CCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence            11000111233333344455555554422  334444455555555555555555433

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.94  E-value=4.9e-26  Score=226.45  Aligned_cols=264  Identities=17%  Similarity=0.138  Sum_probs=188.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC-CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhh-
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH-PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYAR-  218 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~-  218 (435)
                      ++++.+++.+.+... +.++.. ........+...++++++++++|.+++ ++++|+||++|+.+++++++    ++++ 
T Consensus        33 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~g~t~al~~~~~~l~~~~~~~gd~  110 (400)
T 3vax_A           33 DQRVADIVLHWMTAE-FGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-ELIFTSGATESNNIALLGLAPYGERTGRR  110 (400)
T ss_dssp             CHHHHHHHHHHHHHH-HSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEESCHHHHHHHHHHTTHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHHhc-cCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEeCCHHHHHHHHHHHHHHhhccCCCC
Confidence            567777777766543 223322 111223456778899999999998764 89999999999999999987    5665 


Q ss_pred             hhcCCCCCeEEEeCCCchhHHHHHHH---cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210        219 EEKGISLPEIVLPTTAHPAFDKAANY---FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       219 ~~~g~~~~~viv~~~~~~~~~~~~~~---~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                      .        |++++++|+++...+..   .|++++.+|+++++.+|++++++++++++++|++++|+||||.+.++++|.
T Consensus       111 ~--------Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~  182 (400)
T 3vax_A          111 H--------IITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELA  182 (400)
T ss_dssp             E--------EEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHH
T ss_pred             E--------EEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHH
Confidence            5        99999999998776665   599999999998899999999999999999999999999999999999999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEE-EeCCccccccccccCCC
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL-YRDLKYKHCQYFVTSDW  374 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il-~~~~~~~~~~~~~~~~~  374 (435)
                      ++|++||+++|+|++|+.+..           +.++... +|+++.|+||+ ++|.|+|+++ ++++++........+.+
T Consensus       183 ~la~~~~~~li~D~a~~~~~~-----------~~~~~~~-~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~~~  249 (400)
T 3vax_A          183 QQLRATPTYLHVDAAQGYGKV-----------PGDLTTP-IDMISISGHKI-GAPKGVGALVTRRREEMDDERVPLEPIM  249 (400)
T ss_dssp             HHHTTSSCEEEEECTTTTTTS-----------GGGGGSC-CSEEEEETGGG-TSCSSCEEEEECBCSSSTTCBCCCCCSS
T ss_pred             HHHHhcCCEEEEEhhhhcCCC-----------CcChhhc-CcEEEEeHHHh-CCCCceEEEEEecchhccccccccCcee
Confidence            999999999999999974332           3344444 89999999996 6888999988 77754431111112222


Q ss_pred             CCCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        375 PGGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       375 ~gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      .++........++.+...++++.+++..+  +.+.+.++.++..+.+.+.++ ++++..+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~  308 (400)
T 3vax_A          250 FGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVN  308 (400)
T ss_dssp             CSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred             cCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence            22221111112333444444444555443  335566666666666666666 5565543

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.94  E-value=6.9e-25  Score=216.53  Aligned_cols=257  Identities=21%  Similarity=0.188  Sum_probs=181.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYARE  219 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~~  219 (435)
                      ++++.+++.+.+... +.++... .......+...++++.+++++|.+++ ++++|+|||+|+.+++++++    ++++ 
T Consensus        14 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~~~~~~~~~gd-   90 (384)
T 1eg5_A           14 DDRVLEEMIVFYREK-YGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFTSCATESINWILKTVAETFEKRKR-   90 (384)
T ss_dssp             CHHHHHHHHHHHHTC-CCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEESCHHHHHHHHHHHHHHHTTTTCC-
T ss_pred             CHHHHHHHHHHHHhc-CCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEECCHHHHHHHHHHhhhhhccCCCC-
Confidence            567777777766542 2222211 11123456677888999999987654 89999999999999999997    3444 


Q ss_pred             hcCCCCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAK  296 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~  296 (435)
                             +|++++++|+++...+   +..|++++.+|+++++.+|++++++++++++++|++++|+||||.+.++++|.+
T Consensus        91 -------~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~  163 (384)
T 1eg5_A           91 -------TIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTR  163 (384)
T ss_dssp             -------EEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHH
T ss_pred             -------EEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHH
Confidence                   4999999999987766   677999999999888889999999999989999999999999999999999999


Q ss_pred             HHHHcC--CcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCc-cccccccccCC
Q psy10210        297 LGEKYG--IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK-YKHCQYFVTSD  373 (435)
Q Consensus       297 la~~~~--~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~-~~~~~~~~~~~  373 (435)
                      +|++||  +++|+|++|+...           .++++...++|+++.|+||+ ++|.|+|+++.+++. +...       
T Consensus       164 l~~~~~~~~~li~Dea~~~~~-----------~~~~~~~~~~di~~~s~sK~-~g~~G~G~~~~~~~~~~~~~-------  224 (384)
T 1eg5_A          164 IVKKKNKETLVHVDAVQTIGK-----------IPFSLEKLEVDYASFSAHKF-HGPKGVGITYIRKGVPIRPL-------  224 (384)
T ss_dssp             HHHHHCTTCEEEEECTTTTTT-----------SCCCCTTTCCSEEEEEGGGG-TSCTTCEEEEECTTSCCCCS-------
T ss_pred             HHHhcCCceEEEEEhhhhcCC-----------cccCchhcCCCEEEecHHHh-cCCCceEEEEEcCCCccccc-------
Confidence            999999  9999999986211           13344444789999999998 788889997776542 1211       


Q ss_pred             CCCCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       374 ~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      +.++........++.+....+++.++++.+  ..+...++.++..+.+.+.+++ .++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~  283 (384)
T 1eg5_A          225 IHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LGAHI  283 (384)
T ss_dssp             BCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TTCEE
T ss_pred             cccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCeEE
Confidence            111100001122344444445556666653  2344555555566666666655 34443

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.94  E-value=1.1e-25  Score=224.88  Aligned_cols=241  Identities=10%  Similarity=0.064  Sum_probs=178.5

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcCCE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFGMK  248 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~~  248 (435)
                      +...++..++++++++++|.+++..+++|+|||+++.+++.++.++++.        |++++++|++  +...++..|++
T Consensus        40 ~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~--------Vl~~~~~~~~~~~~~~~~~~g~~  111 (416)
T 3isl_A           40 PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDD--------VLIPIYGRFGYLLTEIAERYGAN  111 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCE--------EEEecCCcccHHHHHHHHhcCCe
Confidence            4557778889999999999876533448899999999999998766665        9999999998  77889999999


Q ss_pred             EEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.+|++.++.+|+++++++++ +++++|++++|+||||.+.++++|.++|++||+++|+|++++.+..           
T Consensus       112 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----------  180 (416)
T 3isl_A          112 VHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGC-----------  180 (416)
T ss_dssp             EEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTS-----------
T ss_pred             eEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCC-----------
Confidence            9999999888899999999998 6899999999999999999999999999999999999999864322           


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccccc---CCC---------CCCCC----------------
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVT---SDW---------PGGNY----------------  379 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~---~~~---------~gg~~----------------  379 (435)
                      +++....++|+++.++||++++|.|+|+++.++ ++.+......   ..|         .||..                
T Consensus       181 ~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~-~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~  259 (416)
T 3isl_A          181 EVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNE-RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWS  259 (416)
T ss_dssp             CCCTTTTTCSEEECCSSSTTCCCSSEEEEEECH-HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTS
T ss_pred             CcchhhcCCCEEEecCccccCCCCCeEEEEECH-HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhc
Confidence            456666689999999999878999999966655 3332211000   011         00000                


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcH---HHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGF---EAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~---~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ......++.+...++++.+++..+..   +...++.++..+.+.+.++++ ++..+
T Consensus       260 ~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~  314 (416)
T 3isl_A          260 ERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLF  314 (416)
T ss_dssp             TTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEec
Confidence            00112334455555566666665544   455666666666666666664 44443

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=2.9e-25  Score=219.87  Aligned_cols=267  Identities=17%  Similarity=0.139  Sum_probs=187.4

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~  223 (435)
                      ++++.+++.+.+......++.....++.......++++.+++++|.+++ ++++|+|||+|+.++++++ .++++.    
T Consensus        29 ~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~~~~~~gd~----  103 (390)
T 1elu_A           29 PTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPN-TITITDNVTTGCDIVLWGLDWHQGDE----  103 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEESSHHHHHHHHHHHSCCCTTCE----
T ss_pred             CHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHH-HEEEeCChHHHHHHHHhCCCCCCCCE----
Confidence            4556777766665432112211112233346677888899999987654 8999999999999999998 455554    


Q ss_pred             CCCeEEEeCCCchhHHHH----HHHcCCEEEEEecC--CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLT--SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                          |++++|+|+++...    ++..|++++.+|++  +++.+|++++++++++++++|++++|+||||.+.++++|.++
T Consensus       104 ----vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l  179 (390)
T 1elu_A          104 ----ILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAV  179 (390)
T ss_dssp             ----EEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHH
T ss_pred             ----EEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHH
Confidence                99999999997654    56779999999987  678899999999999899999999999999999999999999


Q ss_pred             HH----HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCC
Q psy10210        298 GE----KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD  373 (435)
Q Consensus       298 a~----~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~  373 (435)
                      |+    +||+++|+|++|+.+..           +++....++|+++.|+||++++|.|+|+++.++ ++.+........
T Consensus       180 ~~~~~~~~~~~li~Dea~~~g~~-----------~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~-~~~~~~~~~~~g  247 (390)
T 1elu_A          180 CRRHQGNYPVRVLVDGAQSAGSL-----------PLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHG-DCLGEINPTYVG  247 (390)
T ss_dssp             HHHCCSSSCCEEEEECTTTBTTB-----------CCCTTTSCCSEEEEESSSTTCCCTTCEEEEECT-TTGGGCCCCSCC
T ss_pred             HhhhhhhcCcEEEEEcccccCCc-----------CCChhhcCCCEEEccccccccCCCceEEEEECH-HhHhhcCCcccc
Confidence            99    99999999999974322           344445578999999999878999999977764 444332111111


Q ss_pred             CCCC-------CC-----CCCccccCCCchHHHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        374 WPGG-------NY-----GSPSVSGSRSGGIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       374 ~~gg-------~~-----~~~~~~gsr~~~~ia~~~a~l~~~g----~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      |...       .|     ......++.+....+++.+++..+.    .+...++.++..+.+.+.+++++++..+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~  322 (390)
T 1elu_A          248 WRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCL  322 (390)
T ss_dssp             TTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred             CCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence            1000       00     0001123444444445556665543    4456667777777777777777666554

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.94  E-value=5.5e-25  Score=218.34  Aligned_cols=241  Identities=14%  Similarity=0.103  Sum_probs=176.3

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcCCE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFGMK  248 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g~~  248 (435)
                      +...+...++++++++++|.++++++++|+|||+|+.++++++.++++.        |++++++|+++  ...++..|++
T Consensus        48 ~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~~~g~~  119 (393)
T 2huf_A           48 PETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDV--------ILIGHTGHWGDRSADMATRYGAD  119 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCE--------EEEECCCcchHHHHHHHHHcCCe
Confidence            4456777889999999999875447999999999999999998666555        99999999984  3455668999


Q ss_pred             EEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.+|+++++.+|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++++.+..           
T Consensus       120 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-----------  188 (393)
T 2huf_A          120 VRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGA-----------  188 (393)
T ss_dssp             EEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----------
T ss_pred             eEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCC-----------
Confidence            99999987788999999999988 899999999999999999999999999999999999999853211           


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc---cCCCC----------CCCCCCCccccCCCchHHH
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV---TSDWP----------GGNYGSPSVSGSRSGGIIA  394 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~---~~~~~----------gg~~~~~~~~gsr~~~~ia  394 (435)
                      ++++...++|+++.|+||++++|.|.|+++.+ +++.+.....   ...|.          ++........++.+...++
T Consensus       189 ~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (393)
T 2huf_A          189 PMFMDRWEIDAMYTGSQKVLGAPPGITPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLY  267 (393)
T ss_dssp             CCCTTTTTCSEEECCSSSTTCCCSSCEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHH
T ss_pred             CcchhhcCccEEEECCCcccccCCCeEEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHH
Confidence            33444457899999999987788899997775 4443321111   11221          1100011122344444555


Q ss_pred             HHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        395 TCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       395 ~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++.++++.+   +.+...++.++..+.+.+.++++ ++..+
T Consensus       268 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  307 (393)
T 2huf_A          268 GLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFELY  307 (393)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence            555566655   34556666667777777777665 54443

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.94  E-value=7.5e-25  Score=216.57  Aligned_cols=240  Identities=11%  Similarity=0.079  Sum_probs=176.8

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcCCEE
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFGMKV  249 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~~v  249 (435)
                      ...++..++++++++++|.+..+++++|+|||+|+.+++.++.++++.        |++++|+|++  +...++..|+++
T Consensus        50 ~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~--------vl~~~~~~~~~~~~~~~~~~g~~~  121 (386)
T 2dr1_A           50 EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGK--------VLVTIIGAFGKRYKEVVESNGRKA  121 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCE--------EEEEESSHHHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCe--------EEEEcCCchhHHHHHHHHHhCCce
Confidence            345677788888999998873347999999999999999998766655        9999999998  888999999999


Q ss_pred             EEEecCCCccccHHHHHHHh--hcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        250 KHIRLTSSYTVDLAALQSAI--TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       250 ~~vp~~~~~~~d~~~l~~~i--~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      +.+|++.++.+|++++++++  .+++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+..           
T Consensus       122 ~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----------  190 (386)
T 2dr1_A          122 VVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGA-----------  190 (386)
T ss_dssp             EEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTB-----------
T ss_pred             EEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCc-----------
Confidence            99999888889999999999  45899999999999999999999999999999999999999986543           


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc-cCCCCCC------CCC-CCccccCCCchHHHHHHHH
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV-TSDWPGG------NYG-SPSVSGSRSGGIIATCWAA  399 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~-~~~~~gg------~~~-~~~~~gsr~~~~ia~~~a~  399 (435)
                      ++++...++|+++.|+||++.+|.|+|+++.++ ++.+..... ...|...      .+. .....++.+....+++.++
T Consensus       191 ~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  269 (386)
T 2dr1_A          191 DIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSE-RFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVA  269 (386)
T ss_dssp             CCCTTTTTCSEEEEETTSTTCCCSSCEEEEECH-HHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHH
T ss_pred             cccccccCCcEEEEeccccccCCCceEEEEECH-HHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Confidence            233444578999999999977777889977765 443221000 0011000      000 0011233444445566666


Q ss_pred             HHHhc----HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        400 MMYFG----FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       400 l~~~g----~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++.+.    .+...++.++..+.+.+.++++ ++..+
T Consensus       270 l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  305 (386)
T 2dr1_A          270 LRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL  305 (386)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC
Confidence            66653    4466667777777777777665 44433

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.93  E-value=5e-25  Score=218.78  Aligned_cols=241  Identities=13%  Similarity=0.079  Sum_probs=179.5

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcCCE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFGMK  248 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~~  248 (435)
                      +...++..++++++++++|.+++.++++|+|||+|+.++++++.++++.        |++++|+|++  +...++..|++
T Consensus        63 ~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~g~~  134 (393)
T 1vjo_A           63 PAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDV--------VLIGVAGYFGNRLVDMAGRYGAD  134 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCE--------EEEEcCChhHHHHHHHHHHcCCc
Confidence            3466788899999999999864337999999999999999999766655        9999999999  99999999999


Q ss_pred             EEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.+|+++++.+|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+...           .
T Consensus       135 ~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~-----------~  203 (393)
T 1vjo_A          135 VRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGG-----------V  203 (393)
T ss_dssp             EEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTT-----------S
T ss_pred             eEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccC-----------c
Confidence            99999988888999999999988 89999999999999999999999999999999999999997211           1


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc---cCCCCCCC-----C-CCCcc-ccCCCchHHHHHH
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV---TSDWPGGN-----Y-GSPSV-SGSRSGGIIATCW  397 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~---~~~~~gg~-----~-~~~~~-~gsr~~~~ia~~~  397 (435)
                      ++++...++|+++.|+||++++|.|+|+++.+++ +.+.....   ...|..+.     | ..... .|+.+....+++.
T Consensus       204 ~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~  282 (393)
T 1vjo_A          204 PIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSR-AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALR  282 (393)
T ss_dssp             CCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHH
T ss_pred             CCcccccCccEEEEcCcccccCCCceEEEEECHH-HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHH
Confidence            3445556789999999998778888999777654 33221000   11121100     0 00011 1244444555666


Q ss_pred             HHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        398 AAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       398 a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++++.+.   .+...++.++..+.+.+.++++ ++..+
T Consensus       283 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  319 (393)
T 1vjo_A          283 EALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLH  319 (393)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred             HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence            7776653   3456666666677777777665 44443

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.93  E-value=6.4e-25  Score=217.45  Aligned_cols=241  Identities=12%  Similarity=0.076  Sum_probs=179.6

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcCC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFGM  247 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~  247 (435)
                      .+...+...++++++++++|.+++.++++|+||++|+.++++++.++++.        |+++.+.|++  +...++..|+
T Consensus        51 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~~~g~  122 (393)
T 3kgw_A           51 QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDS--------FLTGTNGIWGMRAAEIADRIGA  122 (393)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCE--------EEEEeCCchhHHHHHHHHHcCC
Confidence            35556778889999999999876656999999999999999998777666        9999988864  4778888999


Q ss_pred             EEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        248 KVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       248 ~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      +++.+|++.++.+|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+.           
T Consensus       123 ~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~-----------  191 (393)
T 3kgw_A          123 RVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGG-----------  191 (393)
T ss_dssp             EEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTT-----------
T ss_pred             ceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccC-----------
Confidence            999999988888999999999998 99999999999999999999999999999999999999986332           


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC-------------CCCCCCCCccccCCCchHH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW-------------PGGNYGSPSVSGSRSGGII  393 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~-------------~gg~~~~~~~~gsr~~~~i  393 (435)
                      .+++....++|+++.++||++++|.|+|+++.+++ +.+........|             .++........++.+...+
T Consensus       192 ~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (393)
T 3kgw_A          192 VPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDK-AKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSL  270 (393)
T ss_dssp             SCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHH
T ss_pred             cccchhhcCCCEEEecCcccccCCCceeEEEECHH-HHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHH
Confidence            24555566789999999998778899999776543 332211111111             1111111112234444555


Q ss_pred             HHHHHHHHHhcH---HHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        394 ATCWAAMMYFGF---EAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       394 a~~~a~l~~~g~---~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      +++.+++..+..   +...++.++..+.+.+.++++ ++..
T Consensus       271 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  310 (393)
T 3kgw_A          271 YCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKF  310 (393)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence            566666665544   555666666666777777665 4443

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.93  E-value=2.7e-25  Score=218.70  Aligned_cols=230  Identities=16%  Similarity=0.148  Sum_probs=172.5

Q ss_pred             HHHHHHHHH-HHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        175 KMEAEVIKM-CARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       175 ~~e~~~~~~-la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      +...+++++ +++++|.+   ++++|+|+|+|+.++++++.++++.        |++++|+|+++..+++..|++++.+|
T Consensus        53 ~~~~~l~~~~la~~~~~~---~v~~~~g~t~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~v~  121 (371)
T 2e7j_A           53 PPIHDFIHNQLPKFLGCD---VARVTNGAREAKFAVMHSLAKKDAW--------VVMDENCHYSSYVAAERAGLNIALVP  121 (371)
T ss_dssp             CCHHHHHHTHHHHHTTSS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCC---EEEEeCChHHHHHHHHHHHhCCCCE--------EEEccCcchHHHHHHHHcCCeEEEee
Confidence            344567777 88888875   7999999999999999998766555        99999999999999999999999999


Q ss_pred             --cCCCccccHHHHHHHhh-----cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        254 --LTSSYTVDLAALQSAIT-----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       254 --~~~~~~~d~~~l~~~i~-----~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                        +++++.+|+++++++++     +++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+..          
T Consensus       122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~----------  191 (371)
T 2e7j_A          122 KTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRM----------  191 (371)
T ss_dssp             CCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTB----------
T ss_pred             cccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCC----------
Confidence              77778899999999998     7899999999999999999999999999999999999999987643          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc-cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC-QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF  405 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~-~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~  405 (435)
                       +++....++|+++.|+||++++|.++|+++.+++ +.+. ......   ++........++.+...++++.++++.+..
T Consensus       192 -~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~  266 (371)
T 2e7j_A          192 -PVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEE-WAEIVLRRSEK---YKNKEVELLGCTARGATIITLMASFPHVRE  266 (371)
T ss_dssp             -CCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTT-TTTTTTCBCSS---CTTSBGGGTTCCCCSHHHHHHHHHHHHHHH
T ss_pred             -CCChhhcCCCEEEecCCcCCCCCCCcEEEEEech-hhhhhcccccc---CcccccccccCCcCHHHHHHHHHHHHHHHH
Confidence             2233334679999999998777788999777654 3332 111111   111000000233444444555566666544


Q ss_pred             HHHHHHH--HHHHHHHHHHHHhcCCcccc
Q psy10210        406 EAQVWIC--VRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       406 ~g~~~~~--~~~~~~~~~~~~~l~~l~~~  432 (435)
                       .+.+++  ++..+.+.+.++++ ++..+
T Consensus       267 -~~~~~~~~~~~~~~l~~~L~~~-~~~~~  293 (371)
T 2e7j_A          267 -RIKRWDEEVEKARRFAAEMEKL-GIKQL  293 (371)
T ss_dssp             -HGGGHHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHc-CcEEe
Confidence             666777  77777777777765 55443

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.93  E-value=1.3e-24  Score=217.40  Aligned_cols=238  Identities=18%  Similarity=0.190  Sum_probs=172.8

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhhhhcCCCCCeEEEeCCCchh----HHHHHHHc
Q psy10210        174 CKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYAREEKGISLPEIVLPTTAHPA----FDKAANYF  245 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~  245 (435)
                      .+...++++.+++++|..+.+++++|+|||+|+.+++++++    +++        ++|++++++|++    +...++..
T Consensus        71 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~g--------d~Vl~~~~~~~~~~~~~~~~~~~~  142 (420)
T 1t3i_A           71 TDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAG--------DEIITTVMEHHSNLVPWQMVAAKT  142 (420)
T ss_dssp             HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTT--------CEEEEETTCCGGGTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCC--------CEEEECcchhHHHHHHHHHHHHhc
Confidence            45567788889999988323489999999999999999983    333        459999999999    66778888


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |++++.+|+++++.+|++++++++++++++|++++++||+|.+.++++|.++|++||+++|+|++|+.+..         
T Consensus       143 g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~---------  213 (420)
T 1t3i_A          143 GAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHY---------  213 (420)
T ss_dssp             CCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS---------
T ss_pred             CcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCc---------
Confidence            99999999988888999999999999999999999999999999999999999999999999999975432         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC--------CCC--CCcc-ccCCCchHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG--------NYG--SPSV-SGSRSGGIIA  394 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg--------~~~--~~~~-~gsr~~~~ia  394 (435)
                        +++....++|+++.|+||. ++|.|+|+++.+ +++.+........|...        .+.  .... .++.+....+
T Consensus       214 --~~~~~~~~~di~~~s~sK~-~~~~g~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (420)
T 1t3i_A          214 --PLDVQLIDCDWLVASGHKM-CAPTGIGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAI  289 (420)
T ss_dssp             --CCCHHHHTCSEEEEEGGGT-TSCTTCEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHH
T ss_pred             --cCchhhcCCCEEEEehhhh-cCCCceEEEEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHH
Confidence              2333334689999999995 688888986665 44443321111111100        000  0001 2334444444


Q ss_pred             HHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        395 TCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       395 ~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      +..++++.+.   .+...++.++..+.+.+.+++++++..+
T Consensus       290 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~  330 (420)
T 1t3i_A          290 ALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLY  330 (420)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence            4444555554   4566666677777777777776665544

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.93  E-value=1.9e-24  Score=218.30  Aligned_cols=260  Identities=17%  Similarity=0.141  Sum_probs=180.5

Q ss_pred             hhchhhHHHHHHHHHHHH----HHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCccccccc-CC
Q psy10210         70 RKIPAVRKKLEEETGKVA----KLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVY-YY  144 (435)
Q Consensus        70 ~~lp~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~g  144 (435)
                      +++|...+.+++||+.+.    +++.++++... ... ...+| .+.++.++++++......+..+|. ...+.+.+ ..
T Consensus         2 ~~~~~~~~~~~~ml~~~g~~~~~~~~~~~p~~~-~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~g~~~~~   77 (438)
T 1wyu_A            2 DYTPHTEEEIREMLRRVGAASLEDLFAHLPKEI-LSP-PIDLP-EPLPEWKVLEELRRLAAQNLPAHK-AFLGGGVRSHH   77 (438)
T ss_dssp             CCCCCCHHHHHHHHHHHTCSSTGGGGTTSCGGG-SSC-CCCCC-CCCCHHHHHHHHHHHHHTSCCCTT-CCCCSSCCCCC
T ss_pred             CCCCcCHHHHHHHHHHcCCCCHHHHHHhCcHHH-hcC-CCCCC-CCCCHHHHHHHHHHHHhcCcCccc-cccCCCccCCc
Confidence            578888888898888775    33333433222 222 55788 679999999999887765422121 12222222 12


Q ss_pred             hHhHHHHHH---HHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhh
Q psy10210        145 QQDLVDLLT---EVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREE  220 (435)
Q Consensus       145 ~~~l~~~i~---~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~  220 (435)
                      .|+..+.+.   +++..   .++++++.+++..+++.++++++++++|.++. ++++++|+|.++..+..+++ ++    
T Consensus        78 ~p~~v~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~-~i~~~~g~taa~ea~~~a~~~~~----  149 (438)
T 1wyu_A           78 VPPVVQALAARGEFLTA---YTPYQPEVSQGVLQATFEYQTMIAELAGLEIA-NASMYDGATALAEGVLLALRETG----  149 (438)
T ss_dssp             CCHHHHHHHTSHHHHHC---CSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEE-CSCBSSHHHHHHHHHHHHHHHHT----
T ss_pred             CcHHHHHHHhcchhhhc---CCCCcchhhhhHHHHHHHHHHHHHHHhCCCcc-ceEEeCcHHHHHHHHHHHHhcCC----
Confidence            344444442   33333   25777778899999999999999999999754 78999999944443333332 22    


Q ss_pred             cCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAK  296 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~  296 (435)
                          +++|++++++|+++...+    +..|++++.+|. +++.+|+++    ++++|++|++++| ||+|.+.++++|.+
T Consensus       150 ----gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~  219 (438)
T 1wyu_A          150 ----RMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAE  219 (438)
T ss_dssp             ----CCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHH
T ss_pred             ----CCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHH
Confidence                346999999999987555    458999999997 567788876    6788999999999 99999999999999


Q ss_pred             HHHHcCCcEEEecc-ccchhhhcccccCCCCCCCCCCCCCccEEEecCCC-----CCCccCCcEEEEEeCCcccc
Q psy10210        297 LGEKYGIPVHVDCC-LGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-----YGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       297 la~~~~~~livD~~-~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK-----~~~~p~g~g~il~~~~~~~~  365 (435)
                      +|++||+++|+|.. ++-...           ..+ ...|+|++++|+||     +++|| |+|+++.++ ++.+
T Consensus       220 la~~~g~~vivd~d~~a~g~~-----------~~~-~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~-~~~~  280 (438)
T 1wyu_A          220 AAHGAGALFVAVADPLSLGVL-----------KPP-GAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKK-AFVR  280 (438)
T ss_dssp             HHHHTTCEEEEECCTTGGGTB-----------CCH-HHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECG-GGGG
T ss_pred             HHHHcCCEEEEEechhhccCc-----------CCC-ccCCCCEEEECCcccCCCccCCCC-CeeEEEEcH-HHHH
Confidence            99999999997744 211111           111 23468999999888     34566 899866664 4443

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.93  E-value=6.8e-26  Score=221.01  Aligned_cols=238  Identities=13%  Similarity=0.079  Sum_probs=172.1

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFG  246 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g  246 (435)
                      .+...+...++++++++++|.+ +.+++++|+|||+|+.++++++.+  +.        |++++++|+++  ...++..|
T Consensus        28 ~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~--------vl~~~~~~~~~~~~~~~~~~g   97 (353)
T 2yrr_A           28 DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GP--------VLVLVNGAFSQRVAEMAALHG   97 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CC--------EEEEECSHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--Cc--------EEEEcCCCchHHHHHHHHHcC
Confidence            4555677888999999999986 335799999999999999988754  44        99999999984  56677889


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      ++++.+|+++++.+|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+..         
T Consensus        98 ~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~---------  168 (353)
T 2yrr_A           98 LDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGML---------  168 (353)
T ss_dssp             CCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS---------
T ss_pred             CceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccc---------
Confidence            9999999988888999999999988 899999999999999999999999999999999999999953211         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC------CCCCCccccCCCchHHHHHHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG------NYGSPSVSGSRSGGIIATCWAA  399 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg------~~~~~~~~gsr~~~~ia~~~a~  399 (435)
                        ++++...++|++++|+||++++|.|+|+++.+++ +.+.... .+.|...      ........++.+...++++.++
T Consensus       169 --~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a  244 (353)
T 2yrr_A          169 --PFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLE-ARKAFTG-KRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEA  244 (353)
T ss_dssp             --CCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHH-HHHHCCC-CSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHH
T ss_pred             --cccccccCceEEEecCcccccCCCceEEEEECHH-HHHHhcc-CCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHH
Confidence              2333334679999999998788889999776654 3322110 0111000      0000112234444444555666


Q ss_pred             HHHhcH---HHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        400 MMYFGF---EAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       400 l~~~g~---~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      +..+..   +...++.++..+.+.+.++++ ++..
T Consensus       245 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  278 (353)
T 2yrr_A          245 LDLVLEEGVAARERRAREVYAWVLEELKAR-GFRP  278 (353)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence            666544   345556666666666666665 4443

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.93  E-value=2.1e-24  Score=214.09  Aligned_cols=240  Identities=11%  Similarity=-0.032  Sum_probs=173.7

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcCCE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFGMK  248 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g~~  248 (435)
                      +...+...++++.+++++|.++ +++++|+|||+|+.++++++.++++.        |++++++|+++  ...++..|++
T Consensus        38 ~~~~~~~~~l~~~la~~~g~~~-~~v~~t~g~t~a~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~g~~  108 (392)
T 2z9v_A           38 PAFQLLYEKVVDKAQKAMRLSN-KPVILHGEPVLGLEAAAASLISPDDV--------VLNLASGVYGKGFGYWAKRYSPH  108 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSS-CCEEESSCTHHHHHHHHHHHCCTTCC--------EEEEESSHHHHHHHHHHHHHCSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCC-CEEEEeCCchHHHHHHHHHhcCCCCE--------EEEecCCcccHHHHHHHHHcCCc
Confidence            4456677788999999999875 48999999999999999998666655        99999999885  3445667999


Q ss_pred             EEEEecCCCccccHHHHHHHhh--cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAIT--GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~--~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      ++.+|+++++.+|+++++++++  +++++|++++++||||.+.++++|.++|++||+++|+|++|+.+..          
T Consensus       109 ~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~----------  178 (392)
T 2z9v_A          109 LLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGM----------  178 (392)
T ss_dssp             EEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTB----------
T ss_pred             eEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCc----------
Confidence            9999998778899999999994  5789999999999999999999999999999999999999974322          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccccc--CC-CC-------CCCCCCCccccCCCchHHHHH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVT--SD-WP-------GGNYGSPSVSGSRSGGIIATC  396 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~--~~-~~-------gg~~~~~~~~gsr~~~~ia~~  396 (435)
                       ++++...++|+++.|+||++++|.|+|++++++ ++.+......  +. +.       .+........++.+...++++
T Consensus       179 -~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  256 (392)
T 2z9v_A          179 -KTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSE-RAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGL  256 (392)
T ss_dssp             -SCCGGGGTCSEEEECSSSTTCCCSCCEEEEECH-HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHH
T ss_pred             -ccccccccceEEEecCcccccCCCceeEEEECH-HHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHH
Confidence             334444468999999999878889999977665 4332211000  00 10       000001122344454455555


Q ss_pred             HHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        397 WAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       397 ~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      .+++..+.   .+...++.++..+.+.+.++++ ++..+
T Consensus       257 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~  294 (392)
T 2z9v_A          257 DVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVW  294 (392)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred             HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence            66666543   3455666666666666666665 44443

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.93  E-value=7.6e-25  Score=220.42  Aligned_cols=266  Identities=17%  Similarity=0.139  Sum_probs=177.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC-CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH--------
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH-PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD--------  215 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~--------  215 (435)
                      ++++.+++.+.+... +.+|.. +...+...+...++++++++++|.+++ ++++|+|+|+|+.++++++..        
T Consensus        31 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~~~~~~~~~~~~  108 (432)
T 3a9z_A           31 EPEVIQAVTEAMKEA-WGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-DIIFTSGGTESNNLVIHSTVRCFHEQQTL  108 (432)
T ss_dssp             CHHHHHHHHHHHHHC-CSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh-cCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEeCChHHHHHHHHHHHHhhhhhcccc
Confidence            567777777776542 223321 111234567788999999999998654 899999999999999999852        


Q ss_pred             Hhhhh----cCC-CCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCC-CccccHHHHHHHhhcCceEEEEeCCCCCc
Q psy10210        216 YAREE----KGI-SLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPY  285 (435)
Q Consensus       216 ~~~~~----~g~-~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~npt  285 (435)
                      +++..    .+. ..++|+++..+|++....+    +..|++++.+|+++ ++.+|++++++++++++++|++++|+|||
T Consensus       109 ~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~npt  188 (432)
T 3a9z_A          109 QGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNET  188 (432)
T ss_dssp             C------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTT
T ss_pred             CCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCc
Confidence            34320    000 0134666666666654443    44699999999974 78899999999999899999999999999


Q ss_pred             ccccCHHHHHHHHHHcC----------CcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEE
Q psy10210        286 GTMDDIGAIAKLGEKYG----------IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSV  355 (435)
Q Consensus       286 G~~~~i~~i~~la~~~~----------~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~  355 (435)
                      |.+.++++|.++|++|+          +++|+|++|+.+..           ++++...++|+++.|+||+ +||. +|+
T Consensus       189 G~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~-----------~~~~~~~~~d~~~~s~~K~-~g~~-~G~  255 (432)
T 3a9z_A          189 GVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR-----------RVDVEDLGVDFLTIVGHKF-YGPR-IGA  255 (432)
T ss_dssp             CBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS-----------CCCHHHHCCSEEEEEGGGT-TCCS-CEE
T ss_pred             ccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc-----------ccChhhcCCCEEEEehhHh-cCCc-ceE
Confidence            99999999999999999          99999999965422           3343334689999999998 5776 899


Q ss_pred             EEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        356 VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       356 il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ++++++.....   ..+.+.++........++.+...++++.+++..+.  .+...++.++..+.+.+.++++++
T Consensus       256 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  327 (432)
T 3a9z_A          256 LYVRGVGKLTP---LYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG  327 (432)
T ss_dssp             EEETTBTTTBC---CCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEccccccCC---cCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            77765431221   12233332211111123444444445555555442  244555566666666666655433

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.93  E-value=8.2e-25  Score=218.18  Aligned_cols=263  Identities=14%  Similarity=0.115  Sum_probs=180.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH---HHHhhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY---RDYAREE  220 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~---~~~~~~~  220 (435)
                      .+++.+++.+.+.... .|+... ...+...+...++++.+++++|.+++ ++++|+|+|+++.++++++   ..++   
T Consensus        39 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~al~~~~~~l~~~~~~g---  113 (406)
T 3cai_A           39 PDSVATTVSTAFRRSG-ASTVGAHPSARRSAAVLDAAREAVADLVNADPG-GVVLGADRAVLLSLLAEASSSRAGLG---  113 (406)
T ss_dssp             CHHHHHHHHHHHHHCC-SSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESCHHHHHHHHHHHTGGGGBTT---
T ss_pred             CHHHHHHHHHHHHhcC-CCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCChHHHHHHHHHHHhhccCCC---
Confidence            5677777777765431 222111 11123456778889999999998654 8999999999999999887   3334   


Q ss_pred             cCCCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                           ++|++++++|+++...+..    .|++++.+|++ +++.+|++++++++++++++|++++|+||||.+.++++|.
T Consensus       114 -----d~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~  188 (406)
T 3cai_A          114 -----YEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMT  188 (406)
T ss_dssp             -----CEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHH
T ss_pred             -----CEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHH
Confidence                 3599999999986555443    69999999998 7888999999999998999999999999999999999999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcE-EEEEeCCccccccccccCCC
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSS-VVLYRDLKYKHCQYFVTSDW  374 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g-~il~~~~~~~~~~~~~~~~~  374 (435)
                      ++|++||+++|+|++|+.+..           ++++...++|+++.|+||+ ++|. +| +++.+ +++.+........|
T Consensus       189 ~l~~~~~~~li~D~a~~~g~~-----------~~~~~~~~~d~~~~s~~K~-~g~~-~G~~~~~~-~~~~~~l~~~~~~~  254 (406)
T 3cai_A          189 KLVHDVGALVVVDHSAAAPYR-----------LLDIRETDADVVTVNAHAW-GGPP-IGAMVFRD-PSVMNSFGSVSTNP  254 (406)
T ss_dssp             HHHHHTTCEEEEECTTTTTTC-----------CCCHHHHCCSEEEEEGGGG-TSCS-CEEEEESC-HHHHHTSCCCCSCT
T ss_pred             HHHHHcCCEEEEEcccccCCC-----------CCCchhcCCCEEEeehhhh-cCCC-cCeEEEEe-hHHHhhcCCcccCC
Confidence            999999999999999974322           3344344689999999998 5675 78 75554 45443221111111


Q ss_pred             CCCCCCCCccccCCCchHHHHHHHHHHHh---c--------------HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        375 PGGNYGSPSVSGSRSGGIIATCWAAMMYF---G--------------FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       375 ~gg~~~~~~~~gsr~~~~ia~~~a~l~~~---g--------------~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                       ++........++.+...++++.+++..+   |              .+...++.++..+.+.+.+++++++..+
T Consensus       255 -~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  328 (406)
T 3cai_A          255 -YATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLI  328 (406)
T ss_dssp             -TCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred             -CCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEc
Confidence             1110000112344444443444444443   2              3555666666777777777776666544

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.93  E-value=1.2e-24  Score=214.88  Aligned_cols=241  Identities=10%  Similarity=0.018  Sum_probs=176.7

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFG  246 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g  246 (435)
                      .+...++..++++++++++|.+++ +++++|+|||+|+. ++.++.++++.        |+++++.|++  +...++..|
T Consensus        30 ~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~g  100 (384)
T 3zrp_A           30 SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDK--------ILVVSNGVFGDRWEQIFKRYP  100 (384)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCE--------EEEECSSHHHHHHHHHHTTSS
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCE--------EEEecCCcchHHHHHHHHHcC
Confidence            455677888899999999998763 48999999999999 98887666655        9999999976  667778889


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      ++++.+|++.++.+|++++++++++ ++++|++++++||||.+.++++|.++|++||+++|+|++++.+..         
T Consensus       101 ~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~---------  171 (384)
T 3zrp_A          101 VNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAE---------  171 (384)
T ss_dssp             CEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTS---------
T ss_pred             CcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCc---------
Confidence            9999999988888999999999988 899999999999999999999999999999999999999864432         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc-cc-ccCCCCCCC--CC---------CCccccCCCchH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ-YF-VTSDWPGGN--YG---------SPSVSGSRSGGI  392 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~-~~-~~~~~~gg~--~~---------~~~~~gsr~~~~  392 (435)
                        +.+....++|+++.|+||++++|.|+|+++.+++ +.+.. .. ....|....  +.         .....|+.+...
T Consensus       172 --~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  248 (384)
T 3zrp_A          172 --EVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPK-ALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHV  248 (384)
T ss_dssp             --CCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHH-HHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHH
T ss_pred             --cccccccCCCEEEecCcccccCCCceEEEEECHH-HHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHH
Confidence              3455556789999999998778899999776554 32221 00 000110000  00         000112444444


Q ss_pred             HHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        393 IATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       393 ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++++.+++..+.   .+...++.++..+.+.+.++++ ++..+
T Consensus       249 ~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  290 (384)
T 3zrp_A          249 ILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIV  290 (384)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEc
Confidence            555556666554   4456666666666677777665 55443

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.93  E-value=3e-24  Score=213.23  Aligned_cols=240  Identities=12%  Similarity=0.106  Sum_probs=174.4

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH--HHHHHcCCE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD--KAANYFGMK  248 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~--~~~~~~g~~  248 (435)
                      +.......++++.+++++|.+++.++++|+|||+++.+++.++.++++.        |++++|+|+++.  ..++..|++
T Consensus        47 ~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~~~g~~  118 (396)
T 2ch1_A           47 AELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDR--------VLIAVNGIWAERAVEMSERYGAD  118 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHHTTCE
T ss_pred             hhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCe--------EEEEcCCcccHHHHHHHHHcCCc
Confidence            4445667888999999999865437999999999999999998766655        999999999984  477889999


Q ss_pred             EEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.+|++.++.+|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+.           .
T Consensus       119 ~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~-----------~  187 (396)
T 2ch1_A          119 VRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCG-----------V  187 (396)
T ss_dssp             EEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTT-----------B
T ss_pred             eEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccC-----------C
Confidence            99999988888999999999988 89999999999999999999999999999999999999987321           1


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc---cCC-----------CCCCCCCCCccccCCCchHH
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV---TSD-----------WPGGNYGSPSVSGSRSGGII  393 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~---~~~-----------~~gg~~~~~~~~gsr~~~~i  393 (435)
                      ++++...++|+++.|+||++++|.|+|++++++ ++.......   ...           |.... ......++.+....
T Consensus       188 ~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  265 (396)
T 2ch1_A          188 PFYMDKWEIDAVYTGAQKVLGAPPGITPISISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYD-EPKRYHHTVASNLI  265 (396)
T ss_dssp             CCCTTTTTCCEEECCCC-CCCCCSSCEEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSS-SCCCCCCCCCHHHH
T ss_pred             ccchhhcCcCEEEEcCCccccCCCCeEEEEECH-HHHHhhhhccCcccceEechHHHHHhhhhhc-ccCCCCCCCcHHHH
Confidence            345555678999999999888889999877765 333221000   000           11000 00112233444444


Q ss_pred             HHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        394 ATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       394 a~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      +++.++++.+.   .+...++.++..+.+.+.++++ ++..+
T Consensus       266 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  306 (396)
T 2ch1_A          266 FALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIF  306 (396)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBS
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence            55666666653   3445555566666666666655 44433

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.93  E-value=2e-24  Score=210.82  Aligned_cols=236  Identities=11%  Similarity=0.004  Sum_probs=170.5

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH--HHHHHcCC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD--KAANYFGM  247 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~--~~~~~~g~  247 (435)
                      .+...+...++++++++++|.++ +++++|+|||+|+.++++++.++++.        |++++++|+++.  ..++..|+
T Consensus        29 ~~~~~~~~~~l~~~la~~~g~~~-~~i~~~~g~t~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~~~g~   99 (352)
T 1iug_A           29 TEAAREVFLKARGLLREAFRTEG-EVLILTGSGTLAMEALVKNLFAPGER--------VLVPVYGKFSERFYEIALEAGL   99 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSS-EEEEEESCHHHHHHHHHHHHCCTTCE--------EEEEECSHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCC-ceEEEcCchHHHHHHHHHhccCCCCe--------EEEEeCCchhHHHHHHHHHcCC
Confidence            45566777889999999999875 48999999999999999998766655        999999999965  45566899


Q ss_pred             EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCC
Q psy10210        248 KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       248 ~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +++.+|+++++.+|++++++   +++++|++++|+||||.+.++++|.++|++|  |+++|+|++|+.+..         
T Consensus       100 ~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~---------  167 (352)
T 1iug_A          100 VVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVG---------  167 (352)
T ss_dssp             EEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTB---------
T ss_pred             ceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCc---------
Confidence            99999998778889998877   6789999999999999999999999999999  999999999863221         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC------CCCCCccccCCCchHHHHHHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG------NYGSPSVSGSRSGGIIATCWAA  399 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg------~~~~~~~~gsr~~~~ia~~~a~  399 (435)
                        +++....++|+++.|+||++++|.|+|+++++++.+ +....  ..|..+      ........++.+...++++.++
T Consensus       168 --~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a  242 (352)
T 1iug_A          168 --EVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRAL-ERLKP--RGYYLDLARELKAQKEGESAWTPAINLVLAVAAV  242 (352)
T ss_dssp             --CCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHH-HTCCC--CSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHH
T ss_pred             --ceeccccCeeEEEecCcccccCCCceeEEEECHHHH-HHhhC--CCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHH
Confidence              334434468999999999878898999977765433 21100  000000      0000111233344444455566


Q ss_pred             HHHhc--HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        400 MMYFG--FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       400 l~~~g--~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      +..+.  .+...++.++..+.+.+.++++ ++..+
T Consensus       243 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  276 (352)
T 1iug_A          243 LEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPV  276 (352)
T ss_dssp             HHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEES
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence            66544  3455666666666677666665 55443

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.93  E-value=3.5e-24  Score=213.07  Aligned_cols=264  Identities=19%  Similarity=0.181  Sum_probs=182.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcC--hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIF--PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYAR  218 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~  218 (435)
                      ++++.+++.+.+... ..++..+...  ....+...++++.+++++|..+.+++++|+|+|+|+.+++++++    +++ 
T Consensus        36 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~g-  113 (406)
T 1kmj_A           36 PSQVIDAEAEFYRHG-YAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAG-  113 (406)
T ss_dssp             CHHHHHHHHHHHHHT-CCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTT-
T ss_pred             CHHHHHHHHHHHHhh-cCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCC-
Confidence            456666666665542 1122111100  12355667788899999988333489999999999999999984    333 


Q ss_pred             hhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHH
Q psy10210        219 EEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAI  294 (435)
Q Consensus       219 ~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i  294 (435)
                             ++|++++++|++.    ...++..|++++.+|+++++.+|++++++++++++++|++++++||||.+.++++|
T Consensus       114 -------d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i  186 (406)
T 1kmj_A          114 -------DNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEM  186 (406)
T ss_dssp             -------CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHH
T ss_pred             -------CEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHH
Confidence                   3599999998763    45577789999999998888899999999999999999999999999999999999


Q ss_pred             HHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC
Q psy10210        295 AKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW  374 (435)
Q Consensus       295 ~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~  374 (435)
                      .++|++||+++|+|++|+.+..           +++....++|+++.|+||. ++|.|+|+++.+ +++.+...   +..
T Consensus       187 ~~l~~~~~~~li~D~~~~~g~~-----------~~~~~~~~~d~~~~s~~K~-~g~~G~G~~~~~-~~~~~~~~---~~~  250 (406)
T 1kmj_A          187 ITLAHQHGAKVLVDGAQAVMHH-----------PVDVQALDCDFYVFSGHKL-YGPTGIGILYVK-EALLQEMP---PWE  250 (406)
T ss_dssp             HHHHHHTTCEEEEECTTTTTTS-----------CCCHHHHTCSEEEEEGGGT-TSCTTCEEEEEC-HHHHHHCC---CSS
T ss_pred             HHHHHHcCCEEEEEchhhcCCC-----------CCcccccCCCEEEEEchhc-cCCCCcEEEEEe-HHHHhhcC---Ccc
Confidence            9999999999999999975432           2333334689999999997 588889997765 44443321   111


Q ss_pred             CCCCCC------------C--Ccc-ccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        375 PGGNYG------------S--PSV-SGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       375 ~gg~~~------------~--~~~-~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                      .++.+.            .  ... .|+.+...+++..++++.+   +.+...++.++..+.+.+.+++++++..+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  327 (406)
T 1kmj_A          251 GGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYG  327 (406)
T ss_dssp             CSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEES
T ss_pred             cCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence            121110            0  001 2334444444444555555   344566666666677777776666655443

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.92  E-value=1.9e-24  Score=219.93  Aligned_cols=237  Identities=14%  Similarity=0.065  Sum_probs=176.0

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCC
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGM  247 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~  247 (435)
                      ...++..++++++++++|++++ ++++|+|+|+++.+++.++.++++.     +++|++++++|++.    ...++..|+
T Consensus       108 ~~~~~~~~l~~~la~~~g~~~~-~v~~t~g~t~al~~~~~~~~~~~~~-----~~~Vl~~~~~~~s~~~~~~~~~~~~G~  181 (465)
T 3e9k_A          108 PWITGDESIVGLMKDIVGANEK-EIALMNALTVNLHLLMLSFFKPTPK-----RYKILLEAKAFPSDHYAIESQLQLHGL  181 (465)
T ss_dssp             CGGGTTHHHHGGGHHHHTCCGG-GEEECSCHHHHHHHHHHHHCCCCSS-----SCEEEEETTCCHHHHHHHHHHHHHTTC
T ss_pred             cHHHhHHHHHHHHHHHcCCCcC-CEEEECCHHHHHHHHHHHhccccCC-----CCEEEEcCCcCCchHHHHHHHHHHcCC
Confidence            3445566789999999999764 8999999999999999998655443     56799999999984    446677888


Q ss_pred             EE-----EEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210        248 KV-----KHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       248 ~v-----~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~  319 (435)
                      ++     ..+|.+.++.+|+++++++++   +++++|++++++||||.+.++++|.++|++||+++|+|++|+.+..   
T Consensus       182 ~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~---  258 (465)
T 3e9k_A          182 NIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNV---  258 (465)
T ss_dssp             CHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS---
T ss_pred             cceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCc---
Confidence            74     344666778899999999996   6899999999999999999999999999999999999999875433   


Q ss_pred             cccCCCCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccccccccCCCCCCC------------CCC---Cc
Q psy10210        320 SAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGN------------YGS---PS  383 (435)
Q Consensus       320 ~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~------------~~~---~~  383 (435)
                              ++++...++|++++++||++. +|.|+|++++++ ++.+........|.++.            +..   .-
T Consensus       259 --------~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  329 (465)
T 3e9k_A          259 --------ELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHE-KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGF  329 (465)
T ss_dssp             --------CCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECG-GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGG
T ss_pred             --------CCchhhcCCCEEEECcccccccCCCceEEEEEcH-HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHh
Confidence                    556666689999999999974 777889966654 44433222233333331            000   01


Q ss_pred             cccCCCchHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        384 VSGSRSGGIIATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       384 ~~gsr~~~~ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ..|+.+...++++.+++..+.   .+.+.++.++..+.+.+.++++
T Consensus       330 ~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  375 (465)
T 3e9k_A          330 RISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHN  375 (465)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence            124555566677777777654   4566677777777777777664

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.92  E-value=5.6e-24  Score=209.79  Aligned_cols=173  Identities=13%  Similarity=0.086  Sum_probs=145.3

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCc-eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH--HHHHHcC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETC-GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD--KAANYFG  246 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~-~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~--~~~~~~g  246 (435)
                      .+...++..++++++++++|.+++.+ +++|+|||+|+.++++++.++++.        |+++++.|++..  ..+...|
T Consensus        47 ~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~g  118 (376)
T 3f0h_A           47 TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDK--------VLVIDGGSFGHRFVQLCEIHE  118 (376)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCC--------EEEEESSHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCe--------EEEEeCChhhHHHHHHHHHcC
Confidence            45566778889999999999875434 555999999999999999877766        999998777743  4577789


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      ++++.+|++.++.+|+++++++++++++++++++|+||||.+.++++|.++|++||+++|+|++++.+..          
T Consensus       119 ~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~----------  188 (376)
T 3f0h_A          119 IPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLAD----------  188 (376)
T ss_dssp             CCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS----------
T ss_pred             CceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCc----------
Confidence            9999999988888999999999988999999999999999999999999999999999999999876543          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                       ++++...|+|+++.++||++.+|.|+|+++.+++
T Consensus       189 -~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~  222 (376)
T 3f0h_A          189 -PFNMNECGADVMITGSQKVLACPPGISVIVLAPR  222 (376)
T ss_dssp             -CCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHH
T ss_pred             -cccccccCccEEEecCcccccCCCceEEEEECHH
Confidence             3444455789999999999766889999655543

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.92  E-value=3.1e-23  Score=205.60  Aligned_cols=234  Identities=15%  Similarity=0.062  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE
Q psy10210        174 CKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI  252 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v  252 (435)
                      .+++..+.+++.+.+|.+ ..+++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+
T Consensus        70 ~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~v  141 (388)
T 1j32_A           70 PRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDE--------VIIPAPFWVSYPEMVKLAEGTPVIL  141 (388)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCE--------EEEESSCCTHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCCChhHHHHHHHcCCEEEEe
Confidence            333333444444444432 2248999999999999999998766655        9999999999999999999999999


Q ss_pred             ecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        253 RLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       253 p~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      |+++  ++.+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     |.+..
T Consensus       142 ~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~~~~  216 (388)
T 1j32_A          142 PTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYD-----DAQHL  216 (388)
T ss_dssp             CCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----TCCCC
T ss_pred             cCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-----CCCCC
Confidence            9873  57799999999998899999999999999998   56999999999999999999999987542     11111


Q ss_pred             C-CCCC--CCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        328 P-FDFS--LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       328 ~-~d~~--~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      + ..+.  ..+.|+++.|+||++ ++.|  +|+++.+ +++.+........   +.++       .+....+++.+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~---~~~~-------~~~~~~~a~~~~l~~  284 (388)
T 1j32_A          217 SIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGP-VPLVKAATKIQGH---STSN-------VCTFAQYGAIAAYEN  284 (388)
T ss_dssp             CGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECC-HHHHHHHHHHHHT---TTCS-------CCHHHHHHHHHHHHS
T ss_pred             CHHHccccccCCEEEEeechhcc-CCcccceEEEEeC-HHHHHHHHHHHhh---cccC-------CCHHHHHHHHHHHhC
Confidence            1 1121  135789999999984 5555  8996654 4443321111111   1111       111112233334442


Q ss_pred             hc--HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        403 FG--FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       403 ~g--~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ..  .+...++.++..+.+.+.+++++++..+
T Consensus       285 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~  316 (388)
T 1j32_A          285 SQDCVQEMLAAFAERRRYMLDALNAMPGLECP  316 (388)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence            21  2344455566666666667666665544

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.92  E-value=8e-24  Score=207.17  Aligned_cols=257  Identities=8%  Similarity=-0.058  Sum_probs=179.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      .+++.+++.+.+......   .....+...++..++++++++++|.+.++++++|+|||+|+.+++.++..+  .     
T Consensus        16 ~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~--~-----   85 (362)
T 3ffr_A           16 YPTVRQHMITALDEKIGV---ISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK--K-----   85 (362)
T ss_dssp             CTTHHHHHHHHHHTTTTT---SCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS--E-----
T ss_pred             CHHHHHHHHHHhcCCccC---cCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC--c-----
Confidence            455666665555432100   112356677888889999999999875568999999999999999998644  2     


Q ss_pred             CCeEEEeCCCchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc-
Q psy10210        225 LPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-  301 (435)
Q Consensus       225 ~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~-  301 (435)
                         +++..+.|++  +...++..|++++.+|.+.++.+|+++++  ++++|++|++++|+||||.+.++++|.++|++| 
T Consensus        86 ---~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p  160 (362)
T 3ffr_A           86 ---SFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNK  160 (362)
T ss_dssp             ---EEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGST
T ss_pred             ---EEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCC
Confidence               5555554444  44567788999999999888889999998  778999999999999999999999999999999 


Q ss_pred             CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC-
Q psy10210        302 GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG-  380 (435)
Q Consensus       302 ~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~-  380 (435)
                      |+++|+|++|+.+..           +.+...  +|+++.++||++.+|.|+|+++.++ ++.+.......   ||... 
T Consensus       161 ~~~li~D~a~~~~~~-----------~~~~~~--~d~~~~s~~K~~~~~~G~g~~~~~~-~~~~~~~~~~~---gg~~~~  223 (362)
T 3ffr_A          161 DALIFVDAVSSLPYP-----------KFDWTK--IDSVFFSVQKCFGLPAGLGVWILND-RVIEKSKALLA---KRKSIG  223 (362)
T ss_dssp             TSEEEEECTTTTTSS-----------CCCTTS--CSEEEEETTSTTCCCSCCEEEEEEH-HHHHHHHHHHH---TTCCCC
T ss_pred             CCEEEEecccccCCc-----------ccChhH--CcEEEEecccccCCCCceEEEEECH-HHHHHhhhccc---cCCCCc
Confidence            999999999865432           333322  8999999999976689999966654 44322111111   11000 


Q ss_pred             -------------CCccccCCCchHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        381 -------------SPSVSGSRSGGIIATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       381 -------------~~~~~gsr~~~~ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                                   .....++.+...++++.++++.+.   .+...++.++..+.+.+.+++++++..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~  292 (362)
T 3ffr_A          224 TYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGV  292 (362)
T ss_dssp             STTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESS
T ss_pred             ccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceecc
Confidence                         011133444444555666666544   34555666666666777777777665543

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.91  E-value=3.8e-23  Score=205.06  Aligned_cols=214  Identities=19%  Similarity=0.149  Sum_probs=162.5

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+.+. ++.+.+.+.+.+...       ...|....|.+++++++++++.......                
T Consensus        33 ~i~l~~~~~~~~~-~~~v~~a~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~~~~~~g~~----------------   88 (385)
T 1b5p_A           33 LVALTAGEPDFDT-PEHVKEAARRALAQG-------KTKYAPPAGIPELREALAEKFRRENGLS----------------   88 (385)
T ss_dssp             CEECCCSSCSSCC-CHHHHHHHHHHHHTT-------CCSCCCTTCCHHHHHHHHHHHHHTTCCC----------------
T ss_pred             EEEecCCCCCCCC-CHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence            3455666676533 567788877776542       1234444578899999999887642211                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~  257 (435)
                                .++ +++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|+++  +
T Consensus        89 ----------~~~-~~i~~t~g~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  149 (385)
T 1b5p_A           89 ----------VTP-EETIVTVGGSQALFNLFQAILDPGDE--------VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEG  149 (385)
T ss_dssp             ----------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             ----------CCh-HHEEEcCChHHHHHHHHHHhcCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEeecCcccC
Confidence                      123 38999999999999999999777666        99999999999999999999999999973  5


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSL  333 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~  333 (435)
                      +.+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+.+.+.     | ...+ .++..
T Consensus       150 ~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~-~~~~~~~~~~  223 (385)
T 1b5p_A          150 FVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE-----G-EHFSPGRVAP  223 (385)
T ss_dssp             TCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-----S-CCCCGGGTCT
T ss_pred             CCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccC-----C-CCCCHHHcCC
Confidence            6799999999998889999999999999998   56999999999999999999999986541     1 1112 12212


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                       +.+++..|++|. +++.|  +|+++. ++++.+
T Consensus       224 -~~~i~~~s~SK~-~~~~G~RiG~~~~-~~~~~~  254 (385)
T 1b5p_A          224 -EHTLTVNGAAKA-FAMTGWRIGYACG-PKEVIK  254 (385)
T ss_dssp             -TTEEEEEESTTT-TTCGGGCCEEEEC-CHHHHH
T ss_pred             -CCEEEEEechhh-cCCcccceEEEEe-CHHHHH
Confidence             567888899998 45444  899665 445443

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.91  E-value=1.4e-23  Score=208.02  Aligned_cols=262  Identities=13%  Similarity=0.069  Sum_probs=181.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhC--CCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN--GGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g--~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                      .+|++.+++.+.+.....    .+.  +...+++.++++++++.+|  .++ +++++|+|+++++.++++++.++++.  
T Consensus        41 ~~~~v~~a~~~~~~~~~~----~y~--~~~~~l~~~la~~l~~~~g~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~--  111 (391)
T 3dzz_A           41 IAPEIMASMEEKLKVAAF----GYE--SVPAEYYKAVADWEEIEHRARPKE-DWCVFASGVVPAISAMVRQFTSPGDQ--  111 (391)
T ss_dssp             CCHHHHHHHHHHHTTCCC----CCB--CCCHHHHHHHHHHHHHHHSCCCCG-GGEEEESCHHHHHHHHHHHHSCTTCE--
T ss_pred             CCHHHHHHHHHHHhcCcC----CCC--CCCHHHHHHHHHHHHHHhCCCCCH-HHEEECCCHHHHHHHHHHHhCCCCCe--
Confidence            367777777777654211    111  1146777888888888887  334 48999999999999999998766665  


Q ss_pred             CCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---CCccccHHHHHHHhh-cCceEEEEeCCCCCcccc---cCHHHH
Q psy10210        222 GISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTM---DDIGAI  294 (435)
Q Consensus       222 g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~---~~i~~i  294 (435)
                            |++++|+|+++...++..|++++.+|++   .++.+|+++++++++ +++++|++++|+||||.+   +++++|
T Consensus       112 ------vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i  185 (391)
T 3dzz_A          112 ------ILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRI  185 (391)
T ss_dssp             ------EEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHH
T ss_pred             ------EEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHH
Confidence                  9999999999999999999999999984   334589999999998 789999999999999999   889999


Q ss_pred             HHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC-CCcc--EEEecCCCCCC-ccCCcEEEEEeCCccccccccc
Q psy10210        295 AKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL-PGVT--SISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFV  370 (435)
Q Consensus       295 ~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~-~gvd--~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~  370 (435)
                      .++|++||+++|+|++|+++...     |....++.... ...|  +++.|+||++. ++.++|+++.+++++.+.....
T Consensus       186 ~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~  260 (391)
T 3dzz_A          186 AELCAKHQVLLISDEIHGDLVLT-----DEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES  260 (391)
T ss_dssp             HHHHHHTTCEEEEECTTTTCBCS-----SCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH
T ss_pred             HHHHHHCCCEEEEecccccccCC-----CCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH
Confidence            99999999999999999887642     21111221111 1134  88999999842 4456899777766665432111


Q ss_pred             cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHh-cCCcccccC
Q psy10210        371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQN-LSDLWLYLP  434 (435)
Q Consensus       371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~-l~~l~~~~p  434 (435)
                      ....  +.       .+.+....+++.+++....  .+...++.++..+.+.+.+++ ++++..+.|
T Consensus       261 ~~~~--~~-------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  318 (391)
T 3dzz_A          261 FFLA--GI-------GEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS  318 (391)
T ss_dssp             HHHH--TC-------SSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC
T ss_pred             HHhh--cc-------CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecc
Confidence            1000  00       0112222334455555421  344555666666667777776 677665443

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.91  E-value=5e-23  Score=204.11  Aligned_cols=213  Identities=16%  Similarity=0.139  Sum_probs=154.9

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|..+ .++++.+.+.+.+....       ..|....|.+++++.+++++...                     
T Consensus        29 i~l~~~~~~~~-~~~~v~~a~~~~~~~~~-------~~y~~~~g~~~l~~~la~~~~~~---------------------   79 (389)
T 1gd9_A           29 ISLGIGEPDFD-TPQHIKEYAKEALDKGL-------THYGPNIGLLELREAIAEKLKKQ---------------------   79 (389)
T ss_dssp             EECCCCSCSSC-CCHHHHHHHHHHHHTTC-------CSCCCTTCCHHHHHHHHHHHHHH---------------------
T ss_pred             EecCCCCCCCC-CCHHHHHHHHHHHhCCC-------CCCCCCCCcHHHHHHHHHHHHHH---------------------
Confidence            34444545433 34566666666655321       12333345666777766666543                     


Q ss_pred             HHHHHHHhCC--CCCCc-eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-
Q psy10210        181 IKMCARMFNG--GPETC-GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-  256 (435)
Q Consensus       181 ~~~la~l~g~--~~~~~-~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-  256 (435)
                             +|.  ++ ++ +++|+||++++.++++++.++++.        |++++|+|+++...++..|++++.+|+++ 
T Consensus        80 -------~g~~~~~-~~~v~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~  143 (389)
T 1gd9_A           80 -------NGIEADP-KTEIMVLLGANQAFLMGLSAFLKDGEE--------VLIPTPAFVSYAPAVILAGGKPVEVPTYEE  143 (389)
T ss_dssp             -------HCCCCCT-TTSEEEESSTTHHHHHHHTTTCCTTCE--------EEEEESCCTTHHHHHHHHTCEEEEEECCGG
T ss_pred             -------hCCCCCC-CCeEEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHCCCEEEEeccCCc
Confidence                   232  23 37 999999999999999988665555        99999999999999999999999999874 


Q ss_pred             -CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210        257 -SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF  331 (435)
Q Consensus       257 -~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~  331 (435)
                       ++.+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++...     |.+..++ ++
T Consensus       144 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~~~  218 (389)
T 1gd9_A          144 DEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYD-----DARHYSIASL  218 (389)
T ss_dssp             GTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT-----TCCCCCGGGS
T ss_pred             cCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccC-----CCCCCCHhhc
Confidence             46789999999998889999999999999998   46999999999999999999999987542     1101111 22


Q ss_pred             C-CCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        332 S-LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       332 ~-~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      . ..+.|+++.|+||++ ++.|  +|+++.+ +++.+
T Consensus       219 ~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~  253 (389)
T 1gd9_A          219 DGMFERTITVNGFSKTF-AMTGWRLGFVAAP-SWIIE  253 (389)
T ss_dssp             TTCGGGEEEEEESTTTT-TCGGGCCEEEECC-HHHHH
T ss_pred             cCCCCCEEEEecChhhc-CCcccceEEEEEC-HHHHH
Confidence            1 145789999999984 5444  6986655 45543

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.91  E-value=3.2e-23  Score=208.14  Aligned_cols=262  Identities=13%  Similarity=0.064  Sum_probs=185.3

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .+|++.+++.+.+....+.    +..  ...+++.++++++++.+|.+ ..+++++|+|+++|+.++++++.++++.   
T Consensus        75 ~~~~v~~a~~~~~~~~~~~----y~~--~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~---  145 (421)
T 3l8a_A           75 PVPEIKEAIINYGREHIFG----YNY--FNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDA---  145 (421)
T ss_dssp             CCHHHHHHHHHHHHHCCSS----CBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEE---
T ss_pred             CCHHHHHHHHHHHhcCCcC----CCC--CCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE---
Confidence            4688888888887652111    111  12678888889999988843 2248999999999999999999777666   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---CCccccHHHHHHHhh-cCceEEEEeCCCCCcccc---cCHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTM---DDIGAIA  295 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~---~~i~~i~  295 (435)
                           |+++.|+|+++...++..|.+++.+|++   .++.+|+++++++++ +++++|++++|+||+|.+   +++++|.
T Consensus       146 -----Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~  220 (421)
T 3l8a_A          146 -----VLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIA  220 (421)
T ss_dssp             -----EEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHH
T ss_pred             -----EEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHH
Confidence                 9999999999999999999999999975   345789999999998 789999999999999998   7899999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC---CCCCccEEEecCCCCCC-ccCCcEEEEEeCCcccccccccc
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF---SLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVT  371 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~---~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~  371 (435)
                      ++|++||+++|+|++|+++.+.     |....++..   ...+.++.+.|++|.+. ++.++|+++.+++++.+......
T Consensus       221 ~l~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~  295 (421)
T 3l8a_A          221 ELCKKHGVILVSDEIHQDLALF-----GNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQ  295 (421)
T ss_dssp             HHHHHHTCEEEEECTTTTCBCT-----TCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEEccccccccC-----CCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHH
Confidence            9999999999999999987652     222122211   11356788889999853 44567998777666654321111


Q ss_pred             CCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        372 SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       372 ~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                      ..+..         ++.+....+++.++++...  .+...++.++..+.+.+.+++++++..+.
T Consensus       296 ~~~~~---------~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~  350 (421)
T 3l8a_A          296 LANNQ---------HEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVME  350 (421)
T ss_dssp             HHTTC---------SCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEEC
T ss_pred             Hhccc---------CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeC
Confidence            11110         1122223345555555421  24455556666666766666666665543

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.90  E-value=2.9e-23  Score=204.36  Aligned_cols=297  Identities=12%  Similarity=0.093  Sum_probs=207.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCC-------CCCCCcChh---HHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTN-------PLHPDIFPG---VCK  175 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~-------~~~~~~~~~---~~~  175 (435)
                      .+|+.|++...|.-.+.+....+.+++.+ .++-+--.| .-....+++..-.+.++-       ..+|.. ++   ..+
T Consensus        40 ~~P~~g~~d~~ie~~l~~la~mdsnn~~~-~~g~GERE~-Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKA-aGssll~~  116 (501)
T 3hl2_A           40 KCPENGWDESTLELFLHELAIMDSNNFLG-NCGVGEREG-RVASALVARRHYRFIHGIGRSGDISAVQPKA-AGSSLLNK  116 (501)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHTTBGGGCSS-CCCCSSCCC-CCSCHHHHHHTTTCCSCBSCSSCTTCCCTTB-HHHHHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHhhccCCCcc-cCCcccchH-HHHHHHHHhhccCcccCCCCccccccCCCCc-cchHHHHH
Confidence            57999999988888888887777666542 222111111 112233443322222211       122221 22   234


Q ss_pred             HHH-HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        176 MEA-EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       176 ~e~-~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      +-. .+.+|+..+ |.+.....++++|+|.++..++.+.+.+++.    ..++||++..+|.++.+++...|+++++|+.
T Consensus       117 ltn~l~ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rp----g~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p  191 (501)
T 3hl2_A          117 ITNSLVLDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRP----KAKYIIWPRIDQKSCFKSMITAGFEPVVIEN  191 (501)
T ss_dssp             HHHHHHHHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCT----TCCEEEEECCCCHHHHHHHHHTTCEEEEECE
T ss_pred             HHHHHHHHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccC----CCCEEEEecchHHHHHHHHHHcCCeEEEEee
Confidence            433 444556665 9887667899999998888888887765421    1246999999999999999999999999976


Q ss_pred             ---CCCccccHHHHHHHhhcC----ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        255 ---TSSYTVDLAALQSAITGN----TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       255 ---~~~~~~d~~~l~~~i~~~----~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                         ++...+|+++++++|.+.    ..+|+.+.++|..|.++|+++|+++|++||+++|||+|||.....+...     +
T Consensus       192 ~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~l-----p  266 (501)
T 3hl2_A          192 VLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHL-----I  266 (501)
T ss_dssp             EEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHH-----H
T ss_pred             eecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhh-----H
Confidence               345789999999999752    3444444555545577999999999999999999999999876433210     0


Q ss_pred             CCCCCCCC-ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210        328 PFDFSLPG-VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE  406 (435)
Q Consensus       328 ~~d~~~~g-vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~  406 (435)
                      ...+. .| +|+++.|+||+++.|.|.++++.+++++.+..   ...++          |++++...+..|++++.+|.+
T Consensus       267 ~sA~~-~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~yP----------Gr~S~Spsldl~~tLL~lGr~  332 (501)
T 3hl2_A          267 QQGAR-VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMYP----------GRASASPSLDVLITLLSLGSN  332 (501)
T ss_dssp             HHHHH-HSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTSC----------SCBCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHh-cCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HHhCC----------CCCCCcHHHHHHHHHHHHHHH
Confidence            11121 25 89999999999999999888778888766553   22332          455666667899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        407 AQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      ||++.+++..+.+.++.++|.++
T Consensus       333 Gy~~ll~e~~ela~~L~~~L~~l  355 (501)
T 3hl2_A          333 GYKKLLKERKEMFSYLSNQIKKL  355 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999888887776554

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.90  E-value=1.1e-23  Score=208.00  Aligned_cols=169  Identities=14%  Similarity=0.129  Sum_probs=136.0

Q ss_pred             HHHHHHHHHHHHHHhCCCC---CCceEEcCChHHHHHHHHHHHH---HHhhhhcCCCCCeEEEeC-CCchhH-HHHHHHc
Q psy10210        174 CKMEAEVIKMCARMFNGGP---ETCGCMTSGGTESIMMACKAYR---DYAREEKGISLPEIVLPT-TAHPAF-DKAANYF  245 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~~---~~~~~~t~ggteai~~a~~a~~---~~~~~~~g~~~~~viv~~-~~~~~~-~~~~~~~  245 (435)
                      .....+++++++++++...   .+++++|+|||+|+.++++++.   ++++.        |++++ +.|+.. ...++..
T Consensus        37 ~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~--------vlv~~~~~~~~~~~~~~~~~  108 (385)
T 2bkw_A           37 VSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKN--------VLVVSTGTFSDRFADCLRSY  108 (385)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCE--------EEEECSSHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCe--------EEEEcCCcchHHHHHHHHHc
Confidence            3344456666666665531   2489999999999999999986   45544        87774 455554 4677888


Q ss_pred             CCEEEEEec-CCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccc
Q psy10210        246 GMKVKHIRL-TSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSA  321 (435)
Q Consensus       246 g~~v~~vp~-~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~  321 (435)
                      |++++.+|+ +.++.+|++++++++++ ++++|++++++||||.+.++++|.++|++|  |+++|+|++|+.+..     
T Consensus       109 g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~-----  183 (385)
T 2bkw_A          109 GAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCE-----  183 (385)
T ss_dssp             TCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTS-----
T ss_pred             CCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCc-----
Confidence            999999999 78888999999999987 899999999999999999999999999999  999999999964322     


Q ss_pred             cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        322 AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                            ++++...++|+++.|+||++++|.|+|+++++++
T Consensus       184 ------~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~  217 (385)
T 2bkw_A          184 ------EFEFDEWGVDFALTASQKAIGAPAGLSISLCSSR  217 (385)
T ss_dssp             ------CCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred             ------cccccccCceEEEecCccccccCCcceEEEEcHH
Confidence                  3444455789999999998788899999777654

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.90  E-value=3.2e-23  Score=205.33  Aligned_cols=259  Identities=11%  Similarity=0.016  Sum_probs=177.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhC--CCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN--GGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g--~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      +|++.+++.+.+....    ..+  .+...+++.++++++++.+|  .++ +++++|+||++|+.++++++.++++.   
T Consensus        47 ~~~v~~a~~~~~~~~~----~~y--~~~~~~~~~~l~~~l~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~---  116 (391)
T 4dq6_A           47 APCIIDSLKNRLEQEI----YGY--TTRPDSYNESIVNWLYRRHNWKIKS-EWLIYSPGVIPAISLLINELTKANDK---  116 (391)
T ss_dssp             CHHHHHHHHHHHTTCC----CCC--BCCCHHHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHSCTTCE---
T ss_pred             CHHHHHHHHHHHhCCC----CCC--CCCCHHHHHHHHHHHHHHhCCCCcH-HHeEEcCChHHHHHHHHHHhCCCCCE---
Confidence            5677777776665411    111  11346777778888888887  444 48999999999999999999776665   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC----CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT----SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIA  295 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~----~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~  295 (435)
                           |+++.|+|+++...++..|++++.+|++    .++.+|++++++++++ +++|++++|+||||.+   +++++|.
T Consensus       117 -----vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~  190 (391)
T 4dq6_A          117 -----IMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLG  190 (391)
T ss_dssp             -----EEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHH
T ss_pred             -----EEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHH
Confidence                 9999999999999999999999999986    2456899999999988 9999999999999999   7899999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC---CCccEEEecCCCCCC-ccCCcEEEEEeCCcccccccccc
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL---PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVT  371 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~---~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~  371 (435)
                      ++|++||+++|+|++|+++...     |....++....   .+.++++.|+||... ++.++|+++.+++++.+......
T Consensus       191 ~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~  265 (391)
T 4dq6_A          191 DICLKHNVKIISDEIHSDIILK-----KHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAF  265 (391)
T ss_dssp             HHHHHTTCEEEEECTTTTCBCT-----TCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHH
T ss_pred             HHHHHcCCEEEeeccccccccC-----CCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHH
Confidence            9999999999999999887542     21111221111   123477889999843 44568997777655544321111


Q ss_pred             CCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHh-cCCccccc
Q psy10210        372 SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQN-LSDLWLYL  433 (435)
Q Consensus       372 ~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~-l~~l~~~~  433 (435)
                      ..+..         ++.+....+++.+++....  .+...++.++..+.+.+.+++ ++++..+.
T Consensus       266 ~~~~~---------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  321 (391)
T 4dq6_A          266 TRIDI---------KRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRK  321 (391)
T ss_dssp             HHTTC---------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC
T ss_pred             HhhcC---------CCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecC
Confidence            11110         1122222334444555421  234455555666666666665 56665543

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.90  E-value=9.1e-23  Score=199.78  Aligned_cols=236  Identities=10%  Similarity=0.049  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHHHhCCCC-CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchh-HHHHHHHcCCEEEE
Q psy10210        175 KMEAEVIKMCARMFNGGP-ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPA-FDKAANYFGMKVKH  251 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~-~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~-~~~~~~~~g~~v~~  251 (435)
                      +...++++.+++++|.+. .+++++|+|||+|+.+++++++.+++.        |++.+ ++|++ +...++..|++++.
T Consensus        37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~g~~~~~  108 (366)
T 1m32_A           37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDK--------VLIVSNGAYGARMVEMAGLMGIAHHA  108 (366)
T ss_dssp             TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCC--------EEEEESSHHHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCe--------EEEEeCCCccHHHHHHHHHhCCceEE
Confidence            344566677777777221 136999999999999999998765554        76665 66765 66778888999999


Q ss_pred             EecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      +|++.++.+|++++++++++  ++++|++++++||||.+.++++|.++|++||+++|+|++|+.+..           ++
T Consensus       109 v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----------~~  177 (366)
T 1m32_A          109 YDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI-----------PM  177 (366)
T ss_dssp             EECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----------CC
T ss_pred             EeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCc-----------Cc
Confidence            99988888999999999986  578999999999999999999999999999999999999974432           33


Q ss_pred             CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC---CC----CC-CccccCCCchHHHHHHHHHH
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG---NY----GS-PSVSGSRSGGIIATCWAAMM  401 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg---~~----~~-~~~~gsr~~~~ia~~~a~l~  401 (435)
                      ++...++|+++.|+||++++|.|+|+++.+++ +.+........+...   .+    .+ ....++.+...++++.+++.
T Consensus       178 ~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~  256 (366)
T 1m32_A          178 DIAALHIDYLISSANKCIQGVPGFAFVIAREQ-KLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALK  256 (366)
T ss_dssp             CTTTTTCSEEEEESSSTTCCCSSEEEEEEEHH-HHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred             cccccCccEEEecCcccccCCCceEEEEECHH-HHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH
Confidence            44445689999999998778889999777754 332211110111000   00    00 00012334344445566666


Q ss_pred             HhcH----HHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        402 YFGF----EAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       402 ~~g~----~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      .+..    +...++.++..+.+.+.++++ ++..
T Consensus       257 ~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~  289 (366)
T 1m32_A          257 ELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNT  289 (366)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred             HHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCee
Confidence            5543    345566666666666666665 4443

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.5e-23  Score=212.25  Aligned_cols=217  Identities=13%  Similarity=0.116  Sum_probs=165.1

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+++..+.|+.+ +++.+.+.+.+.+...      +...|....|.+++++++++++......+                
T Consensus        59 ~i~l~~g~~~~~-~~~~v~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~----------------  115 (447)
T 3b46_A           59 LINLGQGFFSYS-PPQFAIKEAQKALDIP------MVNQYSPTRGRPSLINSLIKLYSPIYNTE----------------  115 (447)
T ss_dssp             CEECCCCSCSSC-CCHHHHHHHHHHTTSG------GGGSCCCTTCCHHHHHHHHHHHTTTTTSC----------------
T ss_pred             eEEccCCCCCCC-CCHHHHHHHHHHHhCc------CCCCCCCCCCCHHHHHHHHHHHHHhcCCC----------------
Confidence            455666777664 5677888887766531      12344455577888888888876532211                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS---  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~---  256 (435)
                                .++ +++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|+++   
T Consensus       116 ----------~~~-~~v~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  176 (447)
T 3b46_A          116 ----------LKA-ENVTVTTGANEGILSCLMGLLNAGDE--------VIVFEPFFDQYIPNIELCGGKVVYVPINPPKE  176 (447)
T ss_dssp             ----------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEEEECCGG
T ss_pred             ----------CCh-hhEEEeCCHHHHHHHHHHHHcCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEEeCCCccc
Confidence                      123 38999999999999999999776665        99999999999999999999999999863   


Q ss_pred             ---------CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        257 ---------SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       257 ---------~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                               ++.+|++++++++++++++|++++|+||||.+   +++++|+++|++||+++|+|++|+++.+.     | 
T Consensus       177 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----g-  250 (447)
T 3b46_A          177 LDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFT-----D-  250 (447)
T ss_dssp             GGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS-----S-
T ss_pred             cccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccC-----C-
Confidence                     46799999999998899999999999999998   68999999999999999999999987542     1 


Q ss_pred             CCCCC-CC--CCCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        325 PLPPF-DF--SLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       325 ~~~~~-d~--~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      ...++ .+  ...+.++++.|++|++ ++.|  +|+++.+++++.+
T Consensus       251 ~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~riG~~~~~~~~l~~  295 (447)
T 3b46_A          251 SFTRIATLSPEIGQLTLTVGSAGKSF-AATGWRIGWVLSLNAELLS  295 (447)
T ss_dssp             CCCCGGGSCHHHHTTEEEEEEHHHHT-TCTTSCCEEEECSCHHHHH
T ss_pred             CCcCHHHcCCCCCCcEEEEecCchhc-CCcchhhEEEEeCCHHHHH
Confidence            11122 11  1246799999999984 4334  8996663555544

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.90  E-value=7.9e-23  Score=203.06  Aligned_cols=230  Identities=12%  Similarity=0.074  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        175 KMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      ++++.+.+++.+.+|.+ +.+++++|+||++++.++++++.++++.        |++++|+|+++...++..|++++.+|
T Consensus        82 ~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~  153 (389)
T 1o4s_A           82 ELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDE--------VIVFSPVWVSYIPQIILAGGTVNVVE  153 (389)
T ss_dssp             HHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEEe
Confidence            33333333333333432 2248999999999999999998666655        99999999999999999999999999


Q ss_pred             cCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        254 LTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       254 ~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      +++  ++.+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++...     |.....
T Consensus       154 ~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-----g~~~~~  228 (389)
T 1o4s_A          154 TFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYT-----DEFTSI  228 (389)
T ss_dssp             CCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCS-----SCCCCH
T ss_pred             cCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CCCCCH
Confidence            873  56789999999998899999999999999998   45999999999999999999999987541     100011


Q ss_pred             CCCC-CCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210        329 FDFS-LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF  405 (435)
Q Consensus       329 ~d~~-~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~  405 (435)
                      ..+. ..+.|+++.|+||++ ++.|  +|+++.+ +++.+........+   .+       +.+....+++.+++.. +.
T Consensus       229 ~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~-~~~~~~l~~~~~~~---~~-------~~~~~~~~a~~~~l~~-~~  295 (389)
T 1o4s_A          229 LDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISS-EKVATAVSKIQSHT---TS-------CINTVAQYAALKALEV-DN  295 (389)
T ss_dssp             HHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHHHHH---TC-------SCCHHHHHHHHHHTTC-CC
T ss_pred             hhcCCCCCcEEEEeechhhc-CCcccceEEEEeC-HHHHHHHHHHhhhc---cc-------CCCHHHHHHHHHHHhc-cH
Confidence            1221 146899999999994 5444  7996654 44443211111111   00       1111111222223322 24


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        406 EAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       406 ~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                      +...+++++..+.+.+.++++ ++..
T Consensus       296 ~~~~~~~~~~~~~l~~~L~~~-g~~~  320 (389)
T 1o4s_A          296 SYMVQTFKERKNFVVERLKKM-GVKF  320 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCee
Confidence            566677777777777777765 4443

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.90  E-value=9.7e-23  Score=205.09  Aligned_cols=214  Identities=17%  Similarity=0.184  Sum_probs=157.7

Q ss_pred             CccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210        101 LEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME  177 (435)
Q Consensus       101 ~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e  177 (435)
                      +.+..+.|+.   ...++.+.+.+.+.+....      ...|....|.+++++++++.+... .. +             
T Consensus        57 i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~lr~~la~~~~~~-~~-~-------------  115 (427)
T 3dyd_A           57 ISLSIGDPTVFGNLPTDPEVTQAMKDALDSGK------YNGYAPSIGFLSSREEIASYYHCP-EA-P-------------  115 (427)
T ss_dssp             EECCCSCTTTTSSSCCCHHHHHHHHHHHHHCC------SSSCCCTTCCHHHHHHHHHHHCBT-TB-C-------------
T ss_pred             EeCCCcCCCccCCCCCCHHHHHHHHHHHhcCc------CCCCCCCCCcHHHHHHHHHHHhhc-CC-C-------------
Confidence            4555555652   3456677777776665421      123334456777777777776543 11 1             


Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--  255 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--  255 (435)
                                  .++ +++++|+|||+|+.+++++++++++.        |++++|+|+.+...++..|++++.+|.+  
T Consensus       116 ------------~~~-~~v~~t~g~t~al~~~~~~l~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  174 (427)
T 3dyd_A          116 ------------LEA-KDVILTSGCSQAIDLCLAVLANPGQN--------ILVPRPGFSLYKTLAESMGIEVKLYNLLPE  174 (427)
T ss_dssp             ------------CCG-GGEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHTTCEEEEEEEEGG
T ss_pred             ------------CCh-HHEEEecCcHHHHHHHHHHhcCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEEecccc
Confidence                        123 48999999999999999999776665        9999999999999999999999999986  


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      .++.+|++++++++++++++|++++|+||||.+-+   +++|+++|++||+++|+|++|++|.+.     |....++...
T Consensus       175 ~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~-----g~~~~~~~~~  249 (427)
T 3dyd_A          175 KSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFS-----DCKYEPLATL  249 (427)
T ss_dssp             GTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCS-----SCCCCCGGGG
T ss_pred             cCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccC-----CCcCccHHHh
Confidence            46679999999999989999999999999999966   999999999999999999999987642     2111122211


Q ss_pred             CCCc-cEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210        333 LPGV-TSISVDTHKY-GFTPKGSSVVLYRDL  361 (435)
Q Consensus       333 ~~gv-d~~~~s~hK~-~~~p~g~g~il~~~~  361 (435)
                      .... .+++.|++|. +..+.++|+++.+++
T Consensus       250 ~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~  280 (427)
T 3dyd_A          250 STDVPILSCGGLAKRWLVPGWRLGWILIHDR  280 (427)
T ss_dssp             CSSCCEEEEEESTTTSSCGGGCCEEEEEECS
T ss_pred             CCCCcEEEEeeccccCCCcCcceEEEEecCc
Confidence            1222 3556699997 444456899888864

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.90  E-value=1.5e-22  Score=202.39  Aligned_cols=261  Identities=17%  Similarity=0.121  Sum_probs=174.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH------HH
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR------DY  216 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~------~~  216 (435)
                      .++++.+++.+.+... +.++... ...++..+...++++++++++|.+++ ++++|+|+++++.+++++++      .+
T Consensus        40 ~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~al~~al~~~~~~~~~~~~  117 (416)
T 1qz9_A           40 RPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLIGARDG-EVVVTDTTSINLFKVLSAALRVQATRSP  117 (416)
T ss_dssp             CBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEECSCHHHHHHHHHHHHHHHHHHHST
T ss_pred             CcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHcCCCcc-cEEEeCChhHHHHHHHHhhcccccccCC
Confidence            3567777777777542 2222110 00012335667788899999998654 89999999999999998876      33


Q ss_pred             hhhhcCCCCCeEEEeCCCchhHHHHH----HHc--CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC
Q psy10210        217 AREEKGISLPEIVLPTTAHPAFDKAA----NYF--GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD  290 (435)
Q Consensus       217 ~~~~~g~~~~~viv~~~~~~~~~~~~----~~~--g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~  290 (435)
                      ++.       .|+++.++|+++..++    +..  |++++.+|+       ++++++++++++++|++++++||||.+.+
T Consensus       118 gd~-------vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~~~~~v~~~~~~nptG~~~~  183 (416)
T 1qz9_A          118 ERR-------VIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQDTAVVMLTHVNYKTGYMHD  183 (416)
T ss_dssp             TCC-------EEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCSTTEEEEEEESBCTTTCBBCC
T ss_pred             CCc-------EEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCCCceEEEEeccccCcccccC
Confidence            332       3566667898765543    334  999999885       78899999889999999999999999999


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCc-EEEEEeCCcccccccc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS-SVVLYRDLKYKHCQYF  369 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~-g~il~~~~~~~~~~~~  369 (435)
                      +++|.++|++||+++|+|++|+.+..           ++++...++|+++.|+||+++++.|+ |+++.+++ +.+....
T Consensus       184 l~~i~~l~~~~~~~li~D~a~~~g~~-----------~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~-~~~~l~~  251 (416)
T 1qz9_A          184 MQALTALSHECGALAIWDLAHSAGAV-----------PVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ-LCDLVPQ  251 (416)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTS-----------CCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTT-TTTTSCC
T ss_pred             HHHHHHHHHHcCCEEEEEccccccCc-----------CCChhhcCCCEEEecCcccCCCCCCCeEEEEECHH-HHhccCC
Confidence            99999999999999999999973221           33333346899999999997667777 99776654 4322111


Q ss_pred             ccCCCCCCC--------CC-----CCccccCCCchHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhc-C--Ccc
Q psy10210        370 VTSDWPGGN--------YG-----SPSVSGSRSGGIIATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNL-S--DLW  430 (435)
Q Consensus       370 ~~~~~~gg~--------~~-----~~~~~gsr~~~~ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l-~--~l~  430 (435)
                      ....|.|..        +.     .....++.+...++++.++++.+.   .+...++.++..+.+.+.++++ +  ++.
T Consensus       252 ~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~  331 (416)
T 1qz9_A          252 PLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELT  331 (416)
T ss_dssp             SCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred             CccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeE
Confidence            111111110        00     001123444455556667777653   4566677777777777777664 4  554


Q ss_pred             cc
Q psy10210        431 LY  432 (435)
Q Consensus       431 ~~  432 (435)
                      .+
T Consensus       332 ~~  333 (416)
T 1qz9_A          332 LV  333 (416)
T ss_dssp             EC
T ss_pred             Ee
Confidence            43

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.90  E-value=5.5e-23  Score=202.20  Aligned_cols=249  Identities=16%  Similarity=0.121  Sum_probs=172.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      ++++.+++.+.+..... +.+..   ++    ..++++.+++++|.++.+++++|+|+|+++.++++++.++++.     
T Consensus        45 ~~~v~~a~~~~~~~~~~-~~y~~---~~----~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~-----  111 (367)
T 3euc_A           45 PPALRSELAARLGEVAL-NRYPV---PS----SEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAK-----  111 (367)
T ss_dssp             CHHHHHHHHHHHHHHHT-TCSCC---CC----HHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCE-----
T ss_pred             CHHHHHHHHHHhhhhhh-hcCCC---Cc----HHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCE-----
Confidence            56777777776653211 11111   12    2456667777788743348999999999999999998766665     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccc---cCHHHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEK  300 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~  300 (435)
                         |++++|+|+++...++..|++++.+|+++++.+|++++++++++ ++++|++++|+||||.+   +++++|.++|++
T Consensus       112 ---Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~  188 (367)
T 3euc_A          112 ---VMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQG  188 (367)
T ss_dssp             ---EEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBT
T ss_pred             ---EEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhh
Confidence               99999999999999999999999999998889999999999998 99999999999999999   678899999999


Q ss_pred             c--CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        301 Y--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       301 ~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      |  |+++|+|++|++|...     +   ........+.++++.|++|++.++.++|+++. ++++.+........|    
T Consensus       189 ~~~~~~li~De~~~~~~~~-----~---~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~----  255 (367)
T 3euc_A          189 SVCRSLVVVDEAYQPFAQE-----S---WMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAG-DPQWLEQLDKVRPPY----  255 (367)
T ss_dssp             TSCBCEEEEECTTCCSSSC-----C---SGGGGGTCTTEEEEEECCCTTSCSCCEEEEEE-CHHHHHHHGGGCCSS----
T ss_pred             cCCCcEEEEeCcchhhccc-----c---hHHHHhhCCCEEEEecchhhcccccCceeeee-CHHHHHHHHHhCCCC----
Confidence            9  9999999999876421     1   11122334567888899999555567888666 455543322211111    


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                              +.+....+++.++++... .+...++.++..+.+.+.+++++++.
T Consensus       256 --------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~  300 (367)
T 3euc_A          256 --------NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVT  300 (367)
T ss_dssp             --------CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred             --------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence                    112222234444444311 13344455555555666666666655

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.90  E-value=5.1e-23  Score=205.07  Aligned_cols=204  Identities=16%  Similarity=0.137  Sum_probs=155.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC--CCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG--PETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~--~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      +|.+++++.+.+.....   ..+...++..++..++.+++++.+|.+  +++++++|+||++++.+++.++.++++.   
T Consensus        55 ~~~v~~a~~~~~~~~~~---~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~---  128 (407)
T 3nra_A           55 TPGAFDLFSAGVQSGGV---QAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDK---  128 (407)
T ss_dssp             CTTHHHHHHHHHHHTHH---HHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCE---
T ss_pred             cHHHHHHHHHHHhcCCC---CCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCE---
Confidence            56677777776653210   001113355677777778888888764  3248999999999999999988766665   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEec------CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL------TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGA  293 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~------~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~  293 (435)
                           |+++.|+|+++...++..|++++.+|+      ++++.+|++++++++++++++|++++|+||||.+-+   +++
T Consensus       129 -----vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~  203 (407)
T 3nra_A          129 -----VAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQ  203 (407)
T ss_dssp             -----EEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHH
T ss_pred             -----EEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHH
Confidence                 999999999999999999999999998      367789999999999989999999999999999966   999


Q ss_pred             HHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC---CCCCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF---SLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       294 i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~---~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      |+++|++||+++|+|++|+++.+.     |....++..   ...+.++++.|++|.+. ++.++|+++. ++++.+
T Consensus       204 i~~~~~~~~~~li~Dea~~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~  273 (407)
T 3nra_A          204 IAALAARYGATVIADQLYSRLRYA-----GASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG-SRAIIA  273 (407)
T ss_dssp             HHHHHHHHTCEEEEECTTTTSBCT-----TCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEE-CHHHHH
T ss_pred             HHHHHHHcCCEEEEEccccccccC-----CCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEc-CHHHHH
Confidence            999999999999999999987652     211112211   22456788899999953 3356788655 455443

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.90  E-value=1.2e-22  Score=201.21  Aligned_cols=178  Identities=16%  Similarity=0.113  Sum_probs=137.6

Q ss_pred             HHHHHHHHHHHHHHHhCCC-CCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210        173 VCKMEAEVIKMCARMFNGG-PET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK  250 (435)
Q Consensus       173 ~~~~e~~~~~~la~l~g~~-~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~  250 (435)
                      ..++++.+.+++.+.+|.+ ..+ ++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++
T Consensus        69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~  140 (386)
T 1u08_A           69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDE--------VICFDPSYDSYAPAIALSGGIVK  140 (386)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCE--------EEEeCCCchhHHHHHHHcCCEEE
Confidence            3444444444444444433 234 7999999999999999998666655        99999999999999999999999


Q ss_pred             EEecCC-CccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        251 HIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       251 ~vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      .+|++. ++.+|++++++++++++++|++++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |.+.
T Consensus       141 ~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----g~~~  215 (386)
T 1u08_A          141 RMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFS-----QQGH  215 (386)
T ss_dssp             EEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCC-----SSCC
T ss_pred             EeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccC-----CCCC
Confidence            999974 578999999999988999999999999999984   5899999999999999999999987542     2222


Q ss_pred             CCC-CCC-CCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        327 PPF-DFS-LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       327 ~~~-d~~-~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      .++ .+. ..+.|+++.|+||++ ++.|  +|+++.+ +++.+
T Consensus       216 ~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~  256 (386)
T 1u08_A          216 ASVLAHPQLRERAVAVSSFGKTY-HMTGWKVGYCVAP-APISA  256 (386)
T ss_dssp             CCGGGSHHHHTTEEEEEEHHHHT-TCGGGCCEEEECC-HHHHH
T ss_pred             cChhcccCccCcEEEEecchhhc-CCcccceEEEEcC-HHHHH
Confidence            222 221 246799999999984 5444  8996654 45443

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.90  E-value=2.4e-22  Score=202.29  Aligned_cols=219  Identities=14%  Similarity=0.025  Sum_probs=157.0

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|.. ..++++.+.+.+.+....      ...|....|.+++++.+++++......+                 
T Consensus        47 i~l~~~~~~~-~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~lr~~la~~~~~~~g~~-----------------  102 (437)
T 3g0t_A           47 CRMEMGVPGL-PAPQIGIETEIQKLREGV------ASIYPNLDGLPELKQEASRFAKLFVNID-----------------  102 (437)
T ss_dssp             EECCCCSCCS-CCCHHHHHHHHHHHHHTG------GGSCCCTTCCHHHHHHHHHHHHHHHCCC-----------------
T ss_pred             EeccCcCCCC-CCCHHHHHHHHHHHhCCc------CcCCCCCCChHHHHHHHHHHHHHhhCCC-----------------
Confidence            4445555544 345666666666555310      1233344456677777776665432211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH--HHhh--hhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYR--DYAR--EEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~--~~~~--~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                               .++ +++++|+|+|+++.++++++.  ++++  .        |+++.|+|+++...++..|++++.+|++ 
T Consensus       103 ---------~~~-~~i~~t~g~t~al~~~~~~l~~~~~gd~~~--------Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~  164 (437)
T 3g0t_A          103 ---------IPA-RACVPTVGSMQGCFVSFLVANRTHKNREYG--------TLFIDPGFNLNKLQCRILGQKFESFDLFE  164 (437)
T ss_dssp             ---------CCG-GGEEEESHHHHHHHHHHHHHTTSCTTCSCC--------EEEEESCCHHHHHHHHHHTCCCEEEEGGG
T ss_pred             ---------CCc-ccEEEeCCHHHHHHHHHHHHhcCCCCCccE--------EEEeCCCcHhHHHHHHHcCCEEEEEeecC
Confidence                     123 489999999999999999997  7776  6        9999999999999999999999999996 


Q ss_pred             CCccccHHHHHHHh-hcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC-CCC--
Q psy10210        256 SSYTVDLAALQSAI-TGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP-LPP--  328 (435)
Q Consensus       256 ~~~~~d~~~l~~~i-~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~-~~~--  328 (435)
                      +++.+|++++++++ ++++++|++++|+||||.+-   ++++|+++|++||+++|+|++|+++.+.  +....+ .++  
T Consensus       165 ~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~  242 (437)
T 3g0t_A          165 YRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFR--KDYSHPGEPLYQ  242 (437)
T ss_dssp             GCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTT--SCCCSTTSSCCC
T ss_pred             CCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccC--CCcCcccccchh
Confidence            55678999999999 77899999999999999984   5888999999999999999999987652  110000 001  


Q ss_pred             CCCCC-CCccEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210        329 FDFSL-PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYK  364 (435)
Q Consensus       329 ~d~~~-~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~  364 (435)
                      .++.. .+.++++.|+||+.. ++.++|+++.+ +++.
T Consensus       243 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~  279 (437)
T 3g0t_A          243 PSVANYTDNYILALSSSKAFSYAGQRIGVLMIS-GKLY  279 (437)
T ss_dssp             CCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC-HHHH
T ss_pred             hccCCCCCcEEEEEcCccCCCCccceeEEEEEC-HHHh
Confidence            23222 566788999999853 33558997665 4443

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.90  E-value=2.7e-22  Score=200.28  Aligned_cols=259  Identities=15%  Similarity=0.107  Sum_probs=172.6

Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC
Q psy10210        114 RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE  193 (435)
Q Consensus       114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~  193 (435)
                      ++++.+.+.+.+....       ..|....|.+++++.+++++......                          +.++ 
T Consensus        56 ~~~v~~a~~~~~~~~~-------~~y~~~~g~~~l~~~la~~l~~~~g~--------------------------~~~~-  101 (406)
T 1xi9_A           56 PEHMKEAYCKAIKEGH-------NYYGDSEGLPELRKAIVEREKRKNGV--------------------------DITP-  101 (406)
T ss_dssp             CHHHHHHHHHHHHTTC-------CSCCCTTCCHHHHHHHHHHHHHHHCC--------------------------CCCG-
T ss_pred             CHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHhcCC--------------------------CCCH-
Confidence            4566666666654321       12333345666777777666543211                          1123 


Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhhc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAITG  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~~  271 (435)
                      +++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|+++  ++.+|++++++++++
T Consensus       102 ~~v~~t~g~~~al~~~~~~l~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~  173 (406)
T 1xi9_A          102 DDVRVTAAVTEALQLIFGALLDPGDE--------ILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD  173 (406)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT
T ss_pred             HHEEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc
Confidence            48999999999999999998666655        99999999999999999999999999873  567899999999988


Q ss_pred             CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc-cEEEecCCCCC
Q psy10210        272 NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV-TSISVDTHKYG  347 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv-d~~~~s~hK~~  347 (435)
                      ++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     +.......+. .+. ++++.|+||++
T Consensus       174 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-----~~~~~~~~~~-~~~~~i~~~s~sK~~  247 (406)
T 1xi9_A          174 RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE-----GEHISPGSLT-KDVPVIVMNGLSKVY  247 (406)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS-----SCCCCHHHHC-SSSCEEEEEESTTTT
T ss_pred             CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccC-----CCCCCHHHcC-CCceEEEEecccccc
Confidence            99999999999999998   45999999999999999999999987541     1000011111 456 78889999994


Q ss_pred             CccCC--cEEEEE-eCC----ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHH
Q psy10210        348 FTPKG--SSVVLY-RDL----KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFN  418 (435)
Q Consensus       348 ~~p~g--~g~il~-~~~----~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~  418 (435)
                       ++.|  +|++++ .++    ++.+.........           .+.+....+++.++++...  .+.+.++.++..+.
T Consensus       248 -~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  315 (406)
T 1xi9_A          248 -FATGWRLGYMYFVDPENKLSEVREAIDRLARIR-----------LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDY  315 (406)
T ss_dssp             -CCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-----------CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred             -CCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-----------cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence             4444  788663 555    5543321111100           1112222233444443221  24455566666666


Q ss_pred             HHHHHHhcCCcccc
Q psy10210        419 YKSCLQNLSDLWLY  432 (435)
Q Consensus       419 ~~~~~~~l~~l~~~  432 (435)
                      +.+.+++++++..+
T Consensus       316 l~~~L~~~~~~~~~  329 (406)
T 1xi9_A          316 IYKRLNEIPGISTT  329 (406)
T ss_dssp             HHHHHHTSTTEECC
T ss_pred             HHHHHHhCCCCeee
Confidence            66667666555443

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.90  E-value=2.3e-22  Score=201.13  Aligned_cols=218  Identities=14%  Similarity=0.132  Sum_probs=153.3

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +++..+.|..+ .++.+.+.+.+.+...      ....|....|.+++++.+++++.......                 
T Consensus        40 idl~~g~~~~~-~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~l~~~ia~~~~~~~g~~-----------------   95 (412)
T 2x5d_A           40 IDLSMGNPDGP-TPPHIVEKLCTVAQRE------DTHGYSTSRGIPRLRRAISHWYRDRYDVQ-----------------   95 (412)
T ss_dssp             EECSSCCCCSC-CCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCC-----------------
T ss_pred             EecCCCCCCCC-CCHHHHHHHHHHHhCC------CCCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence            44555556543 4556777776654421      11233344566777777777665432110                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++++++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|+++  ++
T Consensus        96 ---------~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~--------Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  158 (412)
T 2x5d_A           96 ---------IDPESEAIVTIGSKEGLAHLMLATLDHGDT--------ILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDF  158 (412)
T ss_dssp             ---------CCTTTSEEEESCHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHHHTCEEEEEECSTTSCH
T ss_pred             ---------CCCCcCEEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEeecCCccCC
Confidence                     122138999999999999999998766655        99999999999999999999999999874  34


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCC-
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSL-  333 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~-  333 (435)
                      .+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     |....+ ..+.. 
T Consensus       159 ~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~  233 (412)
T 2x5d_A          159 FNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYD-----GWKAPSIMQVPGA  233 (412)
T ss_dssp             HHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----TCCCCCGGGSTTG
T ss_pred             CCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccC-----CCCCCChhhccCc
Confidence            589999999998889999999999999998   45899999999999999999999987641     111111 12211 


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .+.++++.|+||++. ++.++|+++. ++++.+
T Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~  265 (412)
T 2x5d_A          234 KDIAVEFFTLSKSYNMAGWRIGFMVG-NPELVS  265 (412)
T ss_dssp             GGTEEEEEECC-CCSCTTSCCEEEEE-CHHHHH
T ss_pred             cCcEEEEecCccccCCcccceEEEEc-CHHHHH
Confidence            357899999999953 2245799666 455543

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.90  E-value=3.4e-23  Score=205.99  Aligned_cols=217  Identities=18%  Similarity=0.134  Sum_probs=164.6

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .++|..+.|..+ +++++.+.+.+.+.....   .....|....|.+++++++++++......+                
T Consensus        37 ~i~l~~~~~~~~-~~~~v~~a~~~~~~~~~~---~~~~~y~~~~g~~~lr~~la~~l~~~~g~~----------------   96 (398)
T 3ele_A           37 VYDFSIGNPSIP-APQIVNDTIKELVTDYDS---VALHGYTSAQGDVETRAAIAEFLNNTHGTH----------------   96 (398)
T ss_dssp             CEECCSCCCCSC-CCHHHHHHHHHHHHHSCH---HHHHSCCCTTCCHHHHHHHHHHHHHHHCCC----------------
T ss_pred             eEEeecCCCCCC-CCHHHHHHHHHHHhcCCc---cccCCcCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence            355666667653 567788888877764210   002344455677888888888776543211                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~  257 (435)
                                .++ +++++|+|+++++.++++++.+++ +.        |++++|+|+++...++..|++++.+|++ ++
T Consensus        97 ----------~~~-~~i~~~~g~~~al~~~~~~l~~~g~d~--------vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~  157 (398)
T 3ele_A           97 ----------FNA-DNLYMTMGAAASLSICFRALTSDAYDE--------FITIAPYFPEYKVFVNAAGARLVEVPADTEH  157 (398)
T ss_dssp             ----------CCG-GGEEEESSHHHHHHHHHHHHCCSTTCE--------EEEESSCCTHHHHHHHHTTCEEEEECCCTTT
T ss_pred             ----------CCh-HHEEEccCHHHHHHHHHHHHcCCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEEecCCcC
Confidence                      123 489999999999999999997776 65        9999999999999999999999999997 46


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHH------cCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEK------YGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~------~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      +.+|++++++++++++++|++++|+||||.+-+   +++|+++|++      ||+++|+|++|+++.+.     |. ..+
T Consensus       158 ~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~-----~~-~~~  231 (398)
T 3ele_A          158 FQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYD-----GI-KVP  231 (398)
T ss_dssp             SSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCT-----TC-CCC
T ss_pred             CcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccC-----CC-CcC
Confidence            789999999999999999999999999999944   8888899999      99999999999987642     11 112


Q ss_pred             CCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCC
Q psy10210        329 FDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDL  361 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~  361 (435)
                      ......+.++++.|++|.+. ++.++|+++.+++
T Consensus       232 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  265 (398)
T 3ele_A          232 FVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE  265 (398)
T ss_dssp             CGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTT
T ss_pred             ChHhhcCCeEEEEehhhcCCCccceeEEEEEcch
Confidence            22333456788889999853 4466899766654

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.90  E-value=1.3e-22  Score=200.16  Aligned_cols=215  Identities=12%  Similarity=0.075  Sum_probs=151.4

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNT  273 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~  273 (435)
                      +++++|+||++|+.++++++.++++.        |+++.|+|+++...++..|++++.+|++++  +|++++++++++++
T Consensus        82 ~~i~~t~g~~~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~~  151 (377)
T 3fdb_A           82 EWIFPIPDVVRGLYIAIDHFTPAQSK--------VIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQAGA  151 (377)
T ss_dssp             GGEEEESCHHHHHHHHHHHHSCTTCC--------EEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTTC
T ss_pred             HHEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccCC
Confidence            48999999999999999999777766        999999999999999999999999999865  99999999999999


Q ss_pred             eEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC-CCCCCC-CCCCCCccEEEecCCCCCC
Q psy10210        274 VMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG-YPLPPF-DFSLPGVTSISVDTHKYGF  348 (435)
Q Consensus       274 ~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g-~~~~~~-d~~~~gvd~~~~s~hK~~~  348 (435)
                      +++++++|+||||.+   +++++|.++|++||+++|+|++|+++...     | ....++ .+...+.+++..|++|.+.
T Consensus       152 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~~i~~~s~sK~~g  226 (377)
T 3fdb_A          152 RSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFD-----GQHTVAAGVSDTAASVCITITAPSKAWN  226 (377)
T ss_dssp             CEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-----SCCCCGGGSCHHHHHHEEEEECSTTTTT
T ss_pred             CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcC-----CCCCcccHHHccCCCcEEEEEeChHhcc
Confidence            999999999999999   46888888899999999999999987542     1 111111 1111334588889999852


Q ss_pred             -ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHh
Q psy10210        349 -TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       349 -~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~  425 (435)
                       ++.++|+++..++++.+...... .+         ..++-+....+++.+++....  .+...++.++..+.+.+.+++
T Consensus       227 ~~G~r~G~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  296 (377)
T 3fdb_A          227 IAGLKCAQIIFSNPSDAEHWQQLS-PV---------IKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPK  296 (377)
T ss_dssp             CGGGCCEEEECCSHHHHHHHHHSC-HH---------HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchhheEEEeCCHHHHHHHHHHH-Hh---------hcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             33567876776766544321110 00         011122222233344444321  134445556666666666665


Q ss_pred             -cCCccccc
Q psy10210        426 -LSDLWLYL  433 (435)
Q Consensus       426 -l~~l~~~~  433 (435)
                       ++++..+.
T Consensus       297 ~~~~~~~~~  305 (377)
T 3fdb_A          297 RIPGAKITP  305 (377)
T ss_dssp             HSTTCEECC
T ss_pred             hCCCceEec
Confidence             66665543

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.90  E-value=2.1e-22  Score=201.56  Aligned_cols=220  Identities=16%  Similarity=0.207  Sum_probs=161.0

Q ss_pred             CccccCCCC---CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCC-CCCCCcChhHHHH
Q psy10210        101 LEYFLELPS---QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTN-PLHPDIFPGVCKM  176 (435)
Q Consensus       101 ~~~~~~~P~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~-~~~~~~~~~~~~~  176 (435)
                      +.+..+.|.   ...+++++.+.+.+.+....      ...|....|.+++++++++++....... ...          
T Consensus        36 i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~----------   99 (416)
T 1bw0_A           36 IKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQE------CNGYFPTVGSPEAREAVATWWRNSFVHKEELK----------   99 (416)
T ss_dssp             EECCCCCTTTTSCSCCCHHHHHHHHHHHHTTC------SSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTG----------
T ss_pred             EEecCcCCCcccCCCCCHHHHHHHHHHhhCCc------cCCcCCCCCCHHHHHHHHHHHHhhhcccccCC----------
Confidence            455556663   23567788888888776421      1234445578889999998887311000 000          


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                                 ...++ +++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|+++
T Consensus       100 -----------~~~~~-~~v~~~~g~~~al~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~  159 (416)
T 1bw0_A          100 -----------STIVK-DNVVLCSGGSHGILMAITAICDAGDY--------ALVPQPGFPHYETVCKAYGIGMHFYNCRP  159 (416)
T ss_dssp             -----------GGCCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHTTCEEEEEEEEG
T ss_pred             -----------CCCCc-ceEEEeCChHHHHHHHHHHhCCCCCE--------EEEcCCCcHhHHHHHHHcCcEEEEeecCc
Confidence                       00122 48999999999999999998766665        99999999999999999999999999863


Q ss_pred             --CccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCC----CCC
Q psy10210        257 --SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY----PLP  327 (435)
Q Consensus       257 --~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~----~~~  327 (435)
                        ++.+|+++++++++++++++++++|+||||.+.+   +++|.++|++||+++|+|++|+++.+.     |.    ...
T Consensus       160 ~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~  234 (416)
T 1bw0_A          160 ENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFK-----GKDPNATFT  234 (416)
T ss_dssp             GGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCC-----SSCTTCCCC
T ss_pred             ccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CCCCCCCcc
Confidence              4678999999999888999999999999999966   999999999999999999999986542     11    111


Q ss_pred             CC-CCCCCCccEEEecCCCCCCcc-CCcEEEEEeCC
Q psy10210        328 PF-DFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDL  361 (435)
Q Consensus       328 ~~-d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~  361 (435)
                      ++ .+...+.++++.|++|+...| ..+|+++.+++
T Consensus       235 ~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~  270 (416)
T 1bw0_A          235 SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDP  270 (416)
T ss_dssp             CTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECT
T ss_pred             CHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCc
Confidence            11 222222356677899984333 45899888876

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.89  E-value=2.2e-22  Score=201.30  Aligned_cols=177  Identities=19%  Similarity=0.205  Sum_probs=136.1

Q ss_pred             HHHHHHHHHHHHHHhCCC-CCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEE
Q psy10210        174 CKMEAEVIKMCARMFNGG-PET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH  251 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~-~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~  251 (435)
                      .++++.+.+++.+.+|.+ ..+ ++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.
T Consensus        65 ~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~--------Vl~~~~~y~~~~~~~~~~g~~~~~  136 (411)
T 2o0r_A           65 APLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSE--------VLLIEPFYDSYSPVVAMAGAHRVT  136 (411)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCE--------EEEeCCCcHhHHHHHHHcCCEEEE
Confidence            334444444444444432 223 7999999999999999998766655        999999999999999999999999


Q ss_pred             EecCC---CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        252 IRLTS---SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       252 vp~~~---~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +|+++   ++.+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     |..
T Consensus       137 v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----g~~  211 (411)
T 2o0r_A          137 VPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFD-----HAR  211 (411)
T ss_dssp             EECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT-----TCC
T ss_pred             eeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CCC
Confidence            99864   46799999999998899999999999999998   45799999999999999999999987542     211


Q ss_pred             CCCC-CCC-CCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        326 LPPF-DFS-LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       326 ~~~~-d~~-~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      ..++ .+. ..+.|+++.|+||+ +++.|  +|+++. ++++.+
T Consensus       212 ~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~-~~~~~~  253 (411)
T 2o0r_A          212 HLPLAGFDGMAERTITISSAAKM-FNCTGWKIGWACG-PAELIA  253 (411)
T ss_dssp             CCCGGGSTTTGGGEEEEEEHHHH-TTCTTTCEEEEEC-CHHHHH
T ss_pred             CcChhhccCCCCCEEEEeechhh-cCCccceEEEEee-CHHHHH
Confidence            1122 121 24679999999998 45555  899665 455543

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.89  E-value=8.7e-22  Score=193.96  Aligned_cols=208  Identities=15%  Similarity=0.165  Sum_probs=155.8

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|..+. ++++.+.+.+.+...       ...|....|.+++++.+++++.......                 
T Consensus        32 i~l~~~~~~~~~-~~~v~~a~~~~~~~~-------~~~y~~~~~~~~l~~~la~~~~~~~g~~-----------------   86 (370)
T 2z61_A           32 IHLEIGEPDFNT-PKPIVDEGIKSLKEG-------KTHYTDSRGILELREKISELYKDKYKAD-----------------   86 (370)
T ss_dssp             EECCCCSCSSCC-CHHHHHHHHHHHHTT-------CCSCCCTTCCHHHHHHHHHHHHHHSSCC-----------------
T ss_pred             EEccCCCCCCCC-CHHHHHHHHHHHHcC-------ccCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence            445555565433 567777777776542       1223344567788888888776532211                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV  260 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~  260 (435)
                               .++ +++++|+||++++.++++++.++++.        |++++|+|+++...++..|++++.+|      +
T Consensus        87 ---------~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~v~------~  142 (370)
T 2z61_A           87 ---------IIP-DNIIITGGSSLGLFFALSSIIDDGDE--------VLIQNPCYPCYKNFIRFLGAKPVFCD------F  142 (370)
T ss_dssp             ---------CCG-GGEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSCCTHHHHHHHHTTCEEEEEC------S
T ss_pred             ---------CCh-hhEEECCChHHHHHHHHHHhcCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEeC------C
Confidence                     123 48999999999999999998766655        99999999999999999999999888      6


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCccEE
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVTSI  339 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd~~  339 (435)
                      |++++++++++++++|++++|+||||.+.+.+ |.++|++||+++|+|++|+++.+.     |......++ ...+.|++
T Consensus       143 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~i~  216 (370)
T 2z61_A          143 TVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYE-----GKCYSAIEFDENLEKTIL  216 (370)
T ss_dssp             SHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSS-----SCCCCGGGTCTTCSSEEE
T ss_pred             CHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccC-----CCCcCHHHccCCCCcEEE
Confidence            89999999988899999999999999999999 999999999999999999987542     111111222 13467999


Q ss_pred             EecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        340 SVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       340 ~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      +.|+||++ ++.|  +|+++.++ ++.+
T Consensus       217 ~~s~sK~~-~~~G~r~G~~~~~~-~~~~  242 (370)
T 2z61_A          217 INGFSKLY-AMTGWRIGYVISND-EIIE  242 (370)
T ss_dssp             EEESTTTT-TCGGGCCEEEECCH-HHHH
T ss_pred             EecChhcc-CCccceEEEEEECH-HHHH
Confidence            99999994 5444  89966554 5543

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.89  E-value=1.7e-22  Score=199.83  Aligned_cols=164  Identities=23%  Similarity=0.258  Sum_probs=131.6

Q ss_pred             HHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---CCccc
Q psy10210        184 CARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---SSYTV  260 (435)
Q Consensus       184 la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---~~~~~  260 (435)
                      ++++++.+++ ++++|+||++++.++++++.++++.        |++++|+|+++...++..|++++.+|++   +++.+
T Consensus        70 la~~~~~~~~-~v~~~~g~~~a~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~  140 (381)
T 1v2d_A           70 LAEEFAVEPE-SVVVTSGATEALYVLLQSLVGPGDE--------VVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRL  140 (381)
T ss_dssp             HHHHHTSCGG-GEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEEC
T ss_pred             HHHhcCCChh-hEEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCc
Confidence            3333444444 7999999999999999998766555        9999999999999999999999999986   56789


Q ss_pred             cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCc
Q psy10210        261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGV  336 (435)
Q Consensus       261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gv  336 (435)
                      |++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+      |..... ..+ ..++
T Consensus       141 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~------g~~~~~~~~~-~~~~  213 (381)
T 1v2d_A          141 DLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY------GERPRRLREF-APER  213 (381)
T ss_dssp             CHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS------SSCCCCHHHH-CTTT
T ss_pred             CHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc------CCCCCCHHHh-cCCC
Confidence            9999999998889999999999999998   4599999999999999999999988754      111111 111 4578


Q ss_pred             cEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      |+++.|+||++ ++.|  +|+++. ++++.+
T Consensus       214 ~~~~~s~sK~~-~~~G~r~G~~~~-~~~~~~  242 (381)
T 1v2d_A          214 TFTVGSAGKRL-EATGYRVGWIVG-PKEFMP  242 (381)
T ss_dssp             EEEEEEHHHHT-TCGGGCCEEEEC-CTTTHH
T ss_pred             EEEEeechhhc-CCcccceEEEEe-CHHHHH
Confidence            99999999984 4444  899665 455543

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.89  E-value=2.9e-22  Score=195.79  Aligned_cols=192  Identities=16%  Similarity=0.114  Sum_probs=150.4

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      ++++.+++.+.+..+        ....+..++..++++++++++|.+++ ++++|+||++|+.+++++++++++.     
T Consensus        27 ~~~v~~a~~~~~~~~--------~~~~g~~~~~~~~~~~l~~~~g~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~-----   92 (359)
T 1svv_A           27 HPKILDLMARDNMTQ--------HAGYGQDSHCAKAARLIGELLERPDA-DVHFISGGTQTNLIACSLALRPWEA-----   92 (359)
T ss_dssp             CHHHHHHHHHHTTCC--------CCSTTCSHHHHHHHHHHHHHHTCTTS-EEEEESCHHHHHHHHHHHHCCTTEE-----
T ss_pred             CHHHHHHHHHHHhhc--------cccccccHHHHHHHHHHHHHhCCCCc-cEEEeCCchHHHHHHHHHHhCCCCE-----
Confidence            566777776655421        11223456777888888998986654 8999999999999999999776665     


Q ss_pred             CCeEEEeCCCchhHHH--HHHHcCCEEEEEecCCCccccHHHHHHHhhcC-------ceEEEEeCCCCCcccccC---HH
Q psy10210        225 LPEIVLPTTAHPAFDK--AANYFGMKVKHIRLTSSYTVDLAALQSAITGN-------TVMLVGSMPNFPYGTMDD---IG  292 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~--~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~-------~~~v~~~~p~nptG~~~~---i~  292 (435)
                         |++++|+|+++..  .++..|++++.+|.+ ++.+|+++++++++++       +++|++++| ||||.+.+   ++
T Consensus        93 ---vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~  167 (359)
T 1svv_A           93 ---VIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELE  167 (359)
T ss_dssp             ---EEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHH
T ss_pred             ---EEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHH
Confidence               9999999999887  478889999999986 6889999999999876       899999999 78999966   99


Q ss_pred             HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC----CCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL----PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~----~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      +|.++|++||+++|+|++|.+|....   .     +.+...    .++|++++++||+ ++|.|+|+++. ++++.+
T Consensus       168 ~i~~~~~~~~~~li~De~~~~~~~~~---~-----~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~-~~~~~~  234 (359)
T 1svv_A          168 DISASCKEHGLYLFLDGARLASALSS---P-----VNDLTLADIARLTDMFYIGATKA-GGMFGEALIIL-NDALKP  234 (359)
T ss_dssp             HHHHHHHHHTCEEEEECTTHHHHHTS---T-----TCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEEC-SGGGCT
T ss_pred             HHHHHHHHhCCEEEEEccchhhhhcC---C-----CcchhhhhhhhcCCEEEEecccC-CCCCceEEEEE-cccHHH
Confidence            99999999999999999997664321   1     122221    2469999999999 56888888555 455543

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.89  E-value=2.8e-22  Score=201.58  Aligned_cols=156  Identities=15%  Similarity=0.162  Sum_probs=128.6

Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC----------CccccHHH
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS----------SYTVDLAA  264 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~----------~~~~d~~~  264 (435)
                      ++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|++.          ++.+|+++
T Consensus       103 ~v~~~~g~~~a~~~~~~~~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~  174 (429)
T 1yiz_A          103 EVLVTVGAYEALYATIQGHVDEGDE--------VIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNE  174 (429)
T ss_dssp             SEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHH
T ss_pred             CEEEecChHHHHHHHHHHhcCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHH
Confidence            7999999999999999998766655        99999999999999999999999999874          46799999


Q ss_pred             HHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CC-CCCccEE
Q psy10210        265 LQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FS-LPGVTSI  339 (435)
Q Consensus       265 l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~-~~gvd~~  339 (435)
                      +++++++++++|++++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |.+..++. +. ..+.|++
T Consensus       175 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~~~~  249 (429)
T 1yiz_A          175 LEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFE-----PFEHIRICTLPGMWERTIT  249 (429)
T ss_dssp             HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----TSCCCCGGGSTTTGGGEEE
T ss_pred             HHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccC-----CCCCcChhhccCCcCceEE
Confidence            9999988999999999999999994   6999999999999999999999987642     22222332 21 3467999


Q ss_pred             EecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        340 SVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       340 ~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      +.|+||. +++.|  +|+++.+ +++.+
T Consensus       250 ~~s~sK~-~~~~G~r~G~~~~~-~~~~~  275 (429)
T 1yiz_A          250 IGSAGKT-FSLTGWKIGWAYGP-EALLK  275 (429)
T ss_dssp             EEEHHHH-HTCGGGCCEEEESC-HHHHH
T ss_pred             Eecchhc-cCCCCcceEEEEeC-HHHHH
Confidence            9999998 45445  8996654 45543

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.89  E-value=9.5e-22  Score=195.14  Aligned_cols=211  Identities=15%  Similarity=0.147  Sum_probs=147.7

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +++..+.|..+. ++++.+.+.+.+...       ...|....|.+++++.+++.+.......                 
T Consensus        34 i~l~~g~~~~~~-~~~v~~a~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~~~~~~g~~-----------------   88 (391)
T 3h14_A           34 IHMEVGQPGTGA-PRGAVEALAKSLETD-------ALGYTVALGLPALRQRIARLYGEWYGVD-----------------   88 (391)
T ss_dssp             EECCCSSCSSCS-CHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCC-----------------
T ss_pred             EEccCCCCCCCC-CHHHHHHHHHHHhcC-------CCCCCCCCChHHHHHHHHHHHHHHhCCC-----------------
Confidence            444445555433 345666666655431       2233344456667777766665432210                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY  258 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~  258 (435)
                               .++ +++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|+++  ++
T Consensus        89 ---------~~~-~~v~~t~g~~~al~~~~~~l~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~  150 (391)
T 3h14_A           89 ---------LDP-GRVVITPGSSGGFLLAFTALFDSGDR--------VGIGAPGYPSYRQILRALGLVPVDLPTAPENRL  150 (391)
T ss_dssp             ---------CCG-GGEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHHTTCEEEEEECCGGGTT
T ss_pred             ---------CCH-HHEEEecChHHHHHHHHHHhcCCCCE--------EEEcCCCCccHHHHHHHcCCEEEEeecCcccCC
Confidence                     223 48999999999999999999777766        99999999999999999999999999974  35


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|+++++++   ++++|++++|+||||.+-+   +++|.++|++||+++|+|++|+++.+.     +......+  ..+
T Consensus       151 ~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~--~~~  220 (391)
T 3h14_A          151 QPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYE-----AKAVTALE--LTD  220 (391)
T ss_dssp             SCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-----SCCCCGGG--TCS
T ss_pred             CCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccC-----CCCcChhh--cCC
Confidence            7899999877   7899999999999999954   999999999999999999999987542     11111111  234


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .++++.|++|.+. ++.++|+++.+ +++.+
T Consensus       221 ~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~  250 (391)
T 3h14_A          221 ECYVINSFSKYFSMTGWRVGWMVVP-EDQVR  250 (391)
T ss_dssp             SSEEEEESSSTTCCTTSCCEEEECC-GGGHH
T ss_pred             CEEEEEechhccCCccceeEEEEeC-HHHHH
Confidence            5677889999853 34567886654 44443

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.89  E-value=7.3e-22  Score=196.42  Aligned_cols=259  Identities=15%  Similarity=0.082  Sum_probs=170.0

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhC--CCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN--GGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g--~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      ++.+.+++.+.+....    .++.. + ..++++.+.+++.+.+|  .++ +++++|+|+++|+.++++++.++++.   
T Consensus        46 ~~~v~~a~~~~~~~~~----~~y~~-~-~~~l~~~la~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~~l~~~gd~---  115 (399)
T 1c7n_A           46 PPELIEGLKKYLDETV----LGYTG-P-TEEYKKTVKKWMKDRHQWDIQT-DWIINTAGVVPAVFNAVREFTKPGDG---  115 (399)
T ss_dssp             CHHHHHHHHHHHHHCC----CSSBC-C-CHHHHHHHHHHHHHHHCCCCCG-GGEEEESSHHHHHHHHHHHHCCTTCE---
T ss_pred             CHHHHHHHHHHHhcCC----CCCCC-C-cHHHHHHHHHHHHHHhCCCCCh-hhEEEcCCHHHHHHHHHHHhcCCCCE---
Confidence            4566666666654310    11110 1 45556666666666666  333 48999999999999999998766655   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C--CccccHHHHHHHhh-cCceEEEEeCCCCCcccccC---HHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S--SYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDD---IGAIA  295 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~--~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~---i~~i~  295 (435)
                           |++++|+|+++...++..|++++.+|++ +  ++.+|+++++++++ +++++|++++|+||||.+-+   +++|.
T Consensus       116 -----vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~  190 (399)
T 1c7n_A          116 -----VIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK  190 (399)
T ss_dssp             -----EEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHH
T ss_pred             -----EEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHH
Confidence                 9999999999999999999999999885 3  34689999999998 68999999999999999966   99999


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCC--CCccEEEecCCCCCC-ccCCcEEEEEeCCcccccccccc
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSL--PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVT  371 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~--~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~  371 (435)
                      ++|++||+++|+|++|+++.+.     |....++. +..  .+.++++.|++|++. ++.++|+++.+++++.+......
T Consensus       191 ~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~  265 (399)
T 1c7n_A          191 DIVLKSDLMLWSDEIHFDLIMP-----GYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSR  265 (399)
T ss_dssp             HHHHHSSCEEEEECTTTTCBCT-----TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEEccccccccC-----CCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHH
Confidence            9999999999999999987542     21111221 111  245678889999843 22447997776665544322112


Q ss_pred             CCCCCCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHh-cCCcccc
Q psy10210        372 SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQN-LSDLWLY  432 (435)
Q Consensus       372 ~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~-l~~l~~~  432 (435)
                      ..|..         ++.+....+++.+++...  ..+...++.++..+.+.+.+++ ++++..+
T Consensus       266 ~~~~~---------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  320 (399)
T 1c7n_A          266 DATSG---------MPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP  320 (399)
T ss_dssp             HHTTC---------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred             hhccc---------CCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe
Confidence            22210         011222222333344331  1223344455556666666665 6666544

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.89  E-value=2.5e-22  Score=199.45  Aligned_cols=218  Identities=15%  Similarity=0.160  Sum_probs=154.3

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+++..+.|..+ .++.+.+.+.+.+..        ...|....|.+++++++++++...                    
T Consensus        32 ~i~l~~~~~~~~-~~~~v~~a~~~~~~~--------~~~y~~~~g~~~lr~~la~~l~~~--------------------   82 (396)
T 3jtx_A           32 AVPLHIGEPKHP-TPKVITDALTASLHE--------LEKYPLTAGLPELRQACANWLKRR--------------------   82 (396)
T ss_dssp             CEECSCCSCCSC-CCHHHHHHHHHTGGG--------GGSCCCTTCCHHHHHHHHHHHHHH--------------------
T ss_pred             eEEeCCcCCCCC-CCHHHHHHHHHHhhh--------ccCCCCCCCcHHHHHHHHHHHHHh--------------------
Confidence            344555555553 345666666654431        223334445666777776666543                    


Q ss_pred             HHHHHHHHhCCC--CCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        180 VIKMCARMFNGG--PET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       180 ~~~~la~l~g~~--~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                              +|.+  ..+ ++++|+|+++++.+++++++++++. .  .+++|+++.|+|+++...++..|++++.+|++ 
T Consensus        83 --------~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~-~--~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~  151 (396)
T 3jtx_A           83 --------YDGLTVDADNEILPVLGSREALFSFVQTVLNPVSD-G--IKPAIVSPNPFYQIYEGATLLGGGEIHFANCPA  151 (396)
T ss_dssp             --------TTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC----C--CCCEEEEEESCCHHHHHHHHHTTCEEEEEECCT
T ss_pred             --------cCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCc-c--CCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCC
Confidence                    3322  123 8999999999999999999766520 0  01359999999999999999999999999996 


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      +++.+|++++++++++++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++...     +.  .+....
T Consensus       152 ~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~--~~~~~~  224 (396)
T 3jtx_A          152 PSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFD-----GN--KPLGCL  224 (396)
T ss_dssp             TTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCST-----TC--CCCCHH
T ss_pred             CCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CC--CCchHH
Confidence            455789999999999899999999999999999   45666999999999999999999987542     10  122211


Q ss_pred             --------CCCccEEEecCCCC-CCccCCcEEEEEeCCcccc
Q psy10210        333 --------LPGVTSISVDTHKY-GFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       333 --------~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~~~~  365 (435)
                              ..+.++++.|++|. +.++.++|+++ .++++.+
T Consensus       225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~  265 (396)
T 3jtx_A          225 QAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVA-GDAELLK  265 (396)
T ss_dssp             HHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEE-ECHHHHH
T ss_pred             hhhhhcccccCcEEEEeccccccCCcccceEEEE-eCHHHHH
Confidence                    24678888999995 44556789864 4555543

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.89  E-value=1.9e-22  Score=199.06  Aligned_cols=157  Identities=17%  Similarity=0.102  Sum_probs=125.3

Q ss_pred             ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210        195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV  274 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~  274 (435)
                      ++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|+++++.+|+++++++++++++
T Consensus        89 ~v~~~~g~~~a~~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~  160 (376)
T 2dou_A           89 EALALIGSQEGLAHLLLALTEPEDL--------LLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAK  160 (376)
T ss_dssp             SEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEE
T ss_pred             cEEEcCCcHHHHHHHHHHhcCCCCE--------EEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCce
Confidence            8999999999999999998766655        99999999999999999999999999855566899999999988899


Q ss_pred             EEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCccEEEecCCCCCC-c
Q psy10210        275 MLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVTSISVDTHKYGF-T  349 (435)
Q Consensus       275 ~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd~~~~s~hK~~~-~  349 (435)
                      +|++++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |.....++. ...+.++++.|++|++. +
T Consensus       161 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  235 (376)
T 2dou_A          161 VLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYE-----GEAPSPLALPGAKERVVELFSLSKSYNLA  235 (376)
T ss_dssp             EEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-----SCCCCGGGSTTGGGTEEEEEEHHHHHTCG
T ss_pred             EEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-----CCCCChhhcCCCCCcEEEEecchhhcCCh
Confidence            999999999999984   5889999999999999999999987641     111111222 12345788889999842 2


Q ss_pred             cCCcEEEEEeCCcccc
Q psy10210        350 PKGSSVVLYRDLKYKH  365 (435)
Q Consensus       350 p~g~g~il~~~~~~~~  365 (435)
                      +.++|+++ .++++.+
T Consensus       236 G~r~G~~~-~~~~~~~  250 (376)
T 2dou_A          236 GFRLGFAL-GSEEALA  250 (376)
T ss_dssp             GGCCEEEE-ECHHHHH
T ss_pred             hheeEEEe-cCHHHHH
Confidence            34579865 4555543

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.89  E-value=5e-21  Score=192.60  Aligned_cols=251  Identities=10%  Similarity=0.035  Sum_probs=180.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+..+....+. +....+..+...++++.+++++|.+   ..+++++|++++..+++++.++++.    
T Consensus        79 ~~~~v~~a~~~~~~~~~~~~~~-~~~~~G~~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~~al~~l~~~gd~----  150 (427)
T 2w8t_A           79 FDPDVIAAGKEALEKFGSGTCG-SRMLNGTFHDHMEVEQALRDFYGTT---GAIVFSTGYMANLGIISTLAGKGEY----  150 (427)
T ss_dssp             GCHHHHHHHHHHHHHHCSCCCS-CTTTTCCCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHSCTTCE----
T ss_pred             CCHHHHHHHHHHHHHhCCCCcc-cccccCCcHHHHHHHHHHHHHhCCC---ceEEecCcHHHHHHHHHHhcCCCCE----
Confidence            3688999999888764322221 1112233467778888999999874   4567777788999999988666655    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                          |+++.++|.++...++..|++++.+|.     .|++++++++.+    ++++|++++++||+|.+.++++|.++|+
T Consensus       151 ----vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~  221 (427)
T 2w8t_A          151 ----VILDADSHASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAK  221 (427)
T ss_dssp             ----EEEETTCCHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             ----EEECCcccHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHH
Confidence                999999999999999999999988873     589999999976    7899999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      +||+++|+|++|+++.+.   ..|.+... ++. .+++|+++.++||++ ++.| |+++. ++++.+........|.   
T Consensus       222 ~~g~~li~Dea~~~~~~~---~~g~~~~~~~~~-~~~~di~~~s~sK~~-g~~g-G~v~~-~~~l~~~l~~~~~~~~---  291 (427)
T 2w8t_A          222 KHGAMVLVDEAHSMGFFG---PNGRGVYEAQGL-EGQIDFVVGTFSKSV-GTVG-GFVVS-NHPKFEAVRLACRPYI---  291 (427)
T ss_dssp             HTTCEEEEECTTTTTTSS---TTSCCHHHHTTC-TTCCSEEEEESSSTT-CSCC-EEEEE-CCTTGGGGGGTCHHHH---
T ss_pred             HcCCEEEEECCccccccC---CCCCchHhhcCC-CcCCcEEEecchhhh-ccCC-CEEEe-CHHHHHHHHHhccccc---
Confidence            999999999999987652   11111101 233 346899999999995 6666 77555 4565543221111111   


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                           ..++.+...++++.++++.+.. +...+++++..+.+.+.++++
T Consensus       292 -----~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~  335 (427)
T 2w8t_A          292 -----FTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM  335 (427)
T ss_dssp             -----SSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                 1123334445566677776654 667777787888777777765

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.89  E-value=4.5e-22  Score=198.55  Aligned_cols=218  Identities=15%  Similarity=0.074  Sum_probs=160.7

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+. .+++++.+.+.+.+...      ....|....|.+++++.+++++.......                
T Consensus        25 ~i~l~~~~~~~-~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~l~~~la~~~~~~~~~~----------------   81 (410)
T 3e2y_A           25 VVNLGQGFPDI-SPPSYVKEELSKAAFID------NMNQYTRGFGHPALVKALSCLYGKIYQRQ----------------   81 (410)
T ss_dssp             SEECSSCCCCS-CCCHHHHHHHHHHHTCG------GGGSCCCTTCCHHHHHHHHHHHHHHHTSC----------------
T ss_pred             eEEecCCCCCC-CCCHHHHHHHHHHHhCc------cccCCCCCCChHHHHHHHHHHHHHHhCCC----------------
Confidence            34555566665 34567788887776532      12234444567788888888776532221                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC----
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT----  255 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~----  255 (435)
                                .++.+++++|+|+++++.++++++.++++.        |+++.|+|+++...++..|.+++.+|++    
T Consensus        82 ----------~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  143 (410)
T 3e2y_A           82 ----------IDPNEEILVAVGAYGSLFNSIQGLVDPGDE--------VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPT  143 (410)
T ss_dssp             ----------CCTTTSEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEECEECCC
T ss_pred             ----------CCCCCCEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEEecccccc
Confidence                      123248999999999999999998766665        9999999999999999999999999975    


Q ss_pred             -------CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        256 -------SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       256 -------~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                             .++.+|++++++++++++++|++++|+||||.+   +++++|+++|++||+++|+|++|+++.+.     |..
T Consensus       144 ~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----~~~  218 (410)
T 3e2y_A          144 DGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYT-----GHT  218 (410)
T ss_dssp             CSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----TCC
T ss_pred             ccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccC-----CCC
Confidence                   356689999999998899999999999999999   68999999999999999999999987642     211


Q ss_pred             CCCC-CCC-CCCccEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210        326 LPPF-DFS-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYK  364 (435)
Q Consensus       326 ~~~~-d~~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~  364 (435)
                      ..++ .+. ..+.+++..|++|.+. ++.++|+++.+ +++.
T Consensus       219 ~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~  259 (410)
T 3e2y_A          219 HVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP-AHLI  259 (410)
T ss_dssp             CCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC-HHHH
T ss_pred             CCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC-HHHH
Confidence            1111 111 1244677888999843 34568986554 4443

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.88  E-value=4.5e-22  Score=197.97  Aligned_cols=253  Identities=11%  Similarity=0.019  Sum_probs=174.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .++.+.+++.+.+...... ...+....+..++..++++++++++|.+   ++++|+||++|+.++++++.++++.    
T Consensus        58 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g~~---~v~~~~ggt~a~~~~~~~~~~~gd~----  129 (398)
T 3a2b_A           58 TDTRIIKAAQDALEKYGTG-CAGSRFLNGTLDIHVELEEKLSAYVGKE---AAILFSTGFQSNLGPLSCLMGRNDY----  129 (398)
T ss_dssp             GCHHHHHHHHHHHHHHCSC-CCSBTTTTCCCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHSSCTTCE----
T ss_pred             CCHHHHHHHHHHHHHcCCC-CCCcCcccCCcHHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE----
Confidence            3577888888877653211 1111122344577788888999999862   7999999999999999998766665    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                          |++++|+|+++..+++..|++++.+|.     +|++++++++++    ++++|++++++||||.+.++++|.++|+
T Consensus       130 ----V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~  200 (398)
T 3a2b_A          130 ----ILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIAN  200 (398)
T ss_dssp             ----EEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred             ----EEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHH
Confidence                999999999999999999999999985     589999999986    7899999999999999999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCC-C-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-S-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      +||+++|+|++|+.+.+.   ..+.+  ..+. . ..++|+++.|+||+ ++|.| |+++. ++++.+........+.. 
T Consensus       201 ~~~~~li~De~~~~~~~~---~~~~~--~~~~~~~~~~~di~~~s~sK~-~~~~G-G~~~~-~~~~~~~l~~~~~~~~~-  271 (398)
T 3a2b_A          201 EFDAAVMVDDAHSLGVIG---HKGAG--TASHFGLNDDVDLIMGTFSKS-LASLG-GFVAG-DADVIDFLKHNARSVMF-  271 (398)
T ss_dssp             HHTCEEEEECTTTTTTSS---GGGCC--HHHHHTCGGGCSEEEEESSST-TCSSC-EEEEE-CHHHHHHHHHHCHHHHS-
T ss_pred             HcCcEEEEECCCcccccC---CCCCc--hHhhcCCCcCCeEEEeccccc-ccCCC-cEEEe-CHHHHHHHHHhccccee-
Confidence            999999999999876541   01110  1111 1 12468999999999 56877 88665 45554332111111110 


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                             .++.+....+++.++++.+.. +...++.++..+.+.+.++++ ++.
T Consensus       272 -------~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  317 (398)
T 3a2b_A          272 -------SASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFD  317 (398)
T ss_dssp             -------SBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred             -------cCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence                   111222233344455555421 245566666666666666665 443

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.88  E-value=2.5e-21  Score=189.31  Aligned_cols=175  Identities=16%  Similarity=0.118  Sum_probs=139.9

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                      ..++++.+++++|.+++ ++++|+||++++.++++++.++++.        |+++.|+|+++...++..|++++.+|.++
T Consensus        53 ~~~l~~~la~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~~~~~~  123 (354)
T 3ly1_A           53 ILMLGNKLAAHHQVEAP-SILLTAGSSEGIRAAIEAYASLEAQ--------LVIPELTYGDGEHFAKIAGMKVTKVKMLD  123 (354)
T ss_dssp             HHHHHHHHHHHTTSCGG-GEEEESHHHHHHHHHHHHHCCTTCE--------EEEESSSCTHHHHHHHHTTCEEEEECCCT
T ss_pred             hHHHHHHHHHHhCCChH-HEEEeCChHHHHHHHHHHHhCCCCe--------EEECCCCchHHHHHHHHcCCEEEEecCCC
Confidence            35677788888887654 8999999999999999998776665        99999999999999999999999999987


Q ss_pred             CccccHHHHHHHhh--cCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCC-
Q psy10210        257 SYTVDLAALQSAIT--GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-  331 (435)
Q Consensus       257 ~~~~d~~~l~~~i~--~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-  331 (435)
                      ++.+|+++++++++  +++++|++++|+||||.+.+.+++.++++.  ||+++|+|++|+++...     +........ 
T Consensus       124 ~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~~~  198 (354)
T 3ly1_A          124 NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVND-----PRFRSISPMI  198 (354)
T ss_dssp             TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCC-----TTCCCSHHHH
T ss_pred             CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccc-----cccCCHHHHh
Confidence            78999999999998  789999999999999999888777777777  99999999999977541     111111111 


Q ss_pred             CCC-CccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        332 SLP-GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       332 ~~~-gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ... +.++++.|+||++. ++.++|+++. ++++.+.
T Consensus       199 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~  234 (354)
T 3ly1_A          199 TQGAENIILLKTFSKIHAMAGMRVGYAVA-HPTVIAL  234 (354)
T ss_dssp             HTTCSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHH
T ss_pred             hhcCCCEEEEeeChhhccChhhhheeeec-CHHHHHH
Confidence            122 56788889999853 4456788655 5555443

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.88  E-value=3.3e-22  Score=199.70  Aligned_cols=178  Identities=13%  Similarity=0.081  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHHHHHhCCC--CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEE
Q psy10210        174 CKMEAEVIKMCARMFNGG--PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH  251 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~--~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~  251 (435)
                      .++++.+.+++.+.+|.+  +.+++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.
T Consensus        88 ~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~  159 (404)
T 2o1b_A           88 EAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDY--------VLLPDPGYTDYLAGVLLADGKPVP  159 (404)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCSSHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCE--------EEEcCCCchhHHHHHHHCCCEEEE
Confidence            334444444444444543  2248999999999999999998766655        999999999999999999999999


Q ss_pred             EecCC-CccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        252 IRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       252 vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      +|+++ ++.+|++++++++++++++|++++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |....
T Consensus       160 v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~  234 (404)
T 2o1b_A          160 LNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFD-----AKNPS  234 (404)
T ss_dssp             EECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSS-----SCCCC
T ss_pred             eccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-----CCCCC
Confidence            99874 556899999999988899999999999999994   5899999999999999999999987541     21111


Q ss_pred             CCCCC-CCCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        328 PFDFS-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       328 ~~d~~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ..++. ..+.++++.|+||++. ++.++|+++. ++++.+
T Consensus       235 ~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~  273 (404)
T 2o1b_A          235 ILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG-NKDMIQ  273 (404)
T ss_dssp             GGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE-CHHHHH
T ss_pred             hhhcCCCCCCEEEEEecchhccCchhheEeEec-CHHHHH
Confidence            12221 1245788999999853 2345799655 555543

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.88  E-value=2e-21  Score=192.76  Aligned_cols=217  Identities=14%  Similarity=0.060  Sum_probs=147.4

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---CccccHHHHHHHhh
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS---SYTVDLAALQSAIT  270 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~---~~~~d~~~l~~~i~  270 (435)
                      +++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|++.   ++.+|+++++++++
T Consensus        88 ~~v~~t~g~~~al~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~  159 (390)
T 1d2f_A           88 QTVVYGPSVIYMVSELIRQWSETGEG--------VVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA  159 (390)
T ss_dssp             GGEEEESCHHHHHHHHHHHSSCTTCE--------EEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHT
T ss_pred             HHEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhc
Confidence            48999999999999999998766655        99999999999999999999999999863   34689999999998


Q ss_pred             c-CceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc-cEEEecCCC
Q psy10210        271 G-NTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV-TSISVDTHK  345 (435)
Q Consensus       271 ~-~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv-d~~~~s~hK  345 (435)
                      + ++++|++++|+||||.+-   ++++|.++|++||+++|+|++|+++...     |....++.-...+. |. ..|++|
T Consensus       160 ~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~d~-~~s~sK  233 (390)
T 1d2f_A          160 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG-----EQPHIPWSNVARGDWAL-LTSGSK  233 (390)
T ss_dssp             STTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS-----SSCCCCGGGTCCSSEEE-EECSHH
T ss_pred             cCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CCCCcCHHHcchhhHhh-ccCccH
Confidence            6 799999999999999994   4899999999999999999999987542     21111211111122 55 889999


Q ss_pred             CCC-ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHH
Q psy10210        346 YGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSC  422 (435)
Q Consensus       346 ~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~  422 (435)
                      ++. ++.++|+++.+++++.+........  +..+      ++.+....+++.++++..  ..+...++.++..+.+.+.
T Consensus       234 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  305 (390)
T 1d2f_A          234 SFNIPALTGAYGIIENSSSRDAYLSALKG--RDGL------SSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADK  305 (390)
T ss_dssp             HHTCGGGCCEEEEECSHHHHHHHHHHHHT--TSCC------CSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcccChhheEEEECCHHHHHHHHHHHhh--hccc------CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            843 3345799777766654432111110  0001      111222223334444431  1233344555556666666


Q ss_pred             HHh-cCCcccc
Q psy10210        423 LQN-LSDLWLY  432 (435)
Q Consensus       423 ~~~-l~~l~~~  432 (435)
                      +++ ++++..+
T Consensus       306 L~~~~~~~~~~  316 (390)
T 1d2f_A          306 MNAAFPELNWQ  316 (390)
T ss_dssp             HHHHCSSCCCC
T ss_pred             HHhhCCCCEEe
Confidence            666 6666544

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.88  E-value=7.9e-22  Score=194.45  Aligned_cols=157  Identities=15%  Similarity=0.080  Sum_probs=124.1

Q ss_pred             CceEEcCChHHHHHHHHHHHHHH--hhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDY--AREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~--~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~  271 (435)
                      +++++|+|+++++.++++++.++  ++.        |++++|+|+++...++..|++++.+|+++++.+++ ++++++.+
T Consensus        83 ~~i~~t~g~~~al~~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~  153 (376)
T 3ezs_A           83 NELISTLGSREVLFNFPSFVLFDYQNPT--------IAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQ  153 (376)
T ss_dssp             GGEEEESSSHHHHHHHHHHHTTTCSSCE--------EEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHH
T ss_pred             HHEEECcCcHHHHHHHHHHHcCCCCCCE--------EEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhcc
Confidence            48999999999999999999877  665        99999999999999999999999999985544555 77777777


Q ss_pred             CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC------CCCCccEEEec
Q psy10210        272 NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF------SLPGVTSISVD  342 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~------~~~gvd~~~~s  342 (435)
                      ++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++...     +........      ...+.+++..|
T Consensus       154 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~s  228 (376)
T 3ezs_A          154 EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYEN-----TPPPSLLEACMLAGNEAFKNVLVIHS  228 (376)
T ss_dssp             HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSS-----SCCCCHHHHHHHTTCTTCTTEEEEEE
T ss_pred             CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccC-----CCCCCHHHccccccccccCcEEEEec
Confidence            89999999999999999   45888888999999999999999987552     110001111      03567888999


Q ss_pred             CCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        343 THKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       343 ~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ++|.++ ++.++|+++. ++++.+
T Consensus       229 ~sK~~g~~G~r~G~~~~-~~~~~~  251 (376)
T 3ezs_A          229 LSKRSSAPGLRSGFIAG-DSRLLE  251 (376)
T ss_dssp             STTTTTCGGGCCEEEEE-CHHHHH
T ss_pred             chhccCCccceeEEEee-CHHHHH
Confidence            999852 4466898554 555544

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.88  E-value=1.7e-21  Score=192.99  Aligned_cols=236  Identities=8%  Similarity=0.032  Sum_probs=166.4

Q ss_pred             CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH--HHHHH
Q psy10210        167 PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD--KAANY  244 (435)
Q Consensus       167 ~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~--~~~~~  244 (435)
                      .+..+...++..++++.+++++|.+  +++++|+|||+|+.+++..+ .+++        +|+++++.|++..  ..++.
T Consensus        27 ~h~~~~~~~~~~~~~~~l~~~~~~~--~~v~~~~sgt~a~~~~~~~~-~~gd--------~vi~~~~~~~~~~~~~~~~~   95 (379)
T 3ke3_A           27 NHMSKAFQEVMNDLLSNLKTVYNAE--AAVIIPGSGTYGMEAVARQL-TIDE--------DCLIIRNGWFSYRWTQILEK   95 (379)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHTCS--EEEEEESCHHHHHHHHHHHH-CTTC--------EEEEEECSHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCC--CEEEEcCChhHHHHHHHHhC-CCCC--------eEEEEeCCchhHHHHHHHHH
Confidence            3446777888899999999999986  47999999999999988654 3444        4999999998743  44555


Q ss_pred             cC--CEEEEEecCCC---------ccccHHHHHHHhh-cCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEec
Q psy10210        245 FG--MKVKHIRLTSS---------YTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDC  309 (435)
Q Consensus       245 ~g--~~v~~vp~~~~---------~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~  309 (435)
                      .|  .+++.+|++..         +.+|++++++++. +++++|++++++|++|.+.+   +++|.++|++||+++|+|+
T Consensus        96 ~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~  175 (379)
T 3ke3_A           96 GKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDC  175 (379)
T ss_dssp             HCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEe
Confidence            66  47888886431         2589999999995 48999999999999999988   9999999999999999999


Q ss_pred             cccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc-ccCCCCCC---------C-
Q psy10210        310 CLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF-VTSDWPGG---------N-  378 (435)
Q Consensus       310 ~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~-~~~~~~gg---------~-  378 (435)
                      +++ +.           .++++...|+|++++++||++++|.|+|+++.+++ +.+.... ....+...         . 
T Consensus       176 ~~~-g~-----------~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~  242 (379)
T 3ke3_A          176 IAS-GC-----------VWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAA-AIKKVESTESNCFSLDLKQWLTIMRAY  242 (379)
T ss_dssp             TTC-TT-----------CCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHH-HHHHHHTCCCSCSTTCHHHHHHHHHHH
T ss_pred             ccc-CC-----------ccccccccCCCEEEecchhhcCCCCceEEEEECHH-HHHhhhcCCCCceeecHHHHHHHHHhh
Confidence            986 32           25666666899999999999888999999666654 3222110 01111000         0 


Q ss_pred             -CCCCccccCCCchHHHHHHHHHHHhcHH---HHHHHHHHHHHHHHHHHHhc
Q psy10210        379 -YGSPSVSGSRSGGIIATCWAAMMYFGFE---AQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       379 -~~~~~~~gsr~~~~ia~~~a~l~~~g~~---g~~~~~~~~~~~~~~~~~~l  426 (435)
                       .+.....++.+...++++.+++..+..+   ...++.+++.+.+.+.++++
T Consensus       243 ~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~  294 (379)
T 3ke3_A          243 ENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK  294 (379)
T ss_dssp             HTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Confidence             0011122345555555666676666544   45555555555566656554

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.88  E-value=8.6e-22  Score=197.38  Aligned_cols=219  Identities=16%  Similarity=0.087  Sum_probs=161.5

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+. .+++++.+.+.+.+....     ....|....|.+++++.+++++.......                
T Consensus        30 ~i~l~~g~~~~-~~~~~v~~a~~~~~~~~~-----~~~~y~~~~g~~~lr~~la~~~~~~~g~~----------------   87 (422)
T 3fvs_A           30 VVNLGQGFPDF-PPPDFAVEAFQHAVSGDF-----MLNQYTKTFGYPPLTKILASFFGELLGQE----------------   87 (422)
T ss_dssp             CEECCCSSCSS-CCCHHHHHHHHHHHHSCG-----GGGSCCCTTCCHHHHHHHHHHHHHHHTCC----------------
T ss_pred             ceEeCCCCCCC-CCCHHHHHHHHHHHhCCC-----ccCCCCCCCCCHHHHHHHHHHHHHhhCCC----------------
Confidence            45556666665 356678888887776421     12334444567788888887776532211                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS---  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~---  256 (435)
                                .++++++++|+||++++.++++++.++++.        |++++|+|+++...++..|.+++.+|++.   
T Consensus        88 ----------~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  149 (422)
T 3fvs_A           88 ----------IDPLRNVLVTVGGYGALFTAFQALVDEGDE--------VIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPI  149 (422)
T ss_dssp             ----------CCHHHHEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEECBCCCC
T ss_pred             ----------CCCCCcEEEECChHHHHHHHHHHHcCCCCE--------EEEcCCCchhhHHHHHHcCCEEEEEecccccc
Confidence                      122137999999999999999998776665        99999999999999999999999999875   


Q ss_pred             ---------CccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        257 ---------SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       257 ---------~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                               ++.+|++++++++++++++|++++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |.
T Consensus       150 ~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~  224 (422)
T 3fvs_A          150 QNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYD-----GH  224 (422)
T ss_dssp             CSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----TC
T ss_pred             cccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccC-----CC
Confidence                     346899999999998999999999999999994   7999999999999999999999987652     21


Q ss_pred             CCCCC-CCC-CCCccEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210        325 PLPPF-DFS-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYK  364 (435)
Q Consensus       325 ~~~~~-d~~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~  364 (435)
                      ...++ .+. ..+.+++..|++|.+. ++.++|+++.+ +++.
T Consensus       225 ~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~  266 (422)
T 3fvs_A          225 QHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGP-DHIM  266 (422)
T ss_dssp             CCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECC-HHHH
T ss_pred             CCCChhhcccccCcEEEEecchhccCCccceEEEEEeC-HHHH
Confidence            11111 111 1245677888999843 33568986554 4443

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.88  E-value=8.6e-21  Score=194.79  Aligned_cols=210  Identities=11%  Similarity=0.094  Sum_probs=153.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHH-HHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYR-DYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g  222 (435)
                      +++..+.+.+.+..........+...++..+++..+.+++.+..|.+ ..+++++|+|+++++.+++.++. ++++.   
T Consensus       108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~---  184 (500)
T 3tcm_A          108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDG---  184 (500)
T ss_dssp             CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEE---
T ss_pred             CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCE---
Confidence            34455555555554322123344445677788888888887777643 22589999999999999999987 67766   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDI  291 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i  291 (435)
                           |++++|+|+++..+++..|++++.+|+++  ++.+|+++|++++++      ++++|++++|+||||.+   +++
T Consensus       185 -----Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l  259 (500)
T 3tcm_A          185 -----ILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQ  259 (500)
T ss_dssp             -----EEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHH
T ss_pred             -----EEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHH
Confidence                 99999999999999999999999999874  468999999999986      78999999999999999   678


Q ss_pred             HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-----CCC--CCCcc-EEEecCCCCCCc--cCCcEEEEEe--
Q psy10210        292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-----DFS--LPGVT-SISVDTHKYGFT--PKGSSVVLYR--  359 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-----d~~--~~gvd-~~~~s~hK~~~~--p~g~g~il~~--  359 (435)
                      ++|+++|++||+++|+|++|+.+.+.-    +....++     ++.  ...+. ++..|++|.+.|  ...+|+++..  
T Consensus       260 ~~i~~la~~~~~~li~Deay~~~~~~~----~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~  335 (500)
T 3tcm_A          260 YDIVKFCKNEGLVLLADEVYQENIYVD----NKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF  335 (500)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTCBCCT----TCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESC
T ss_pred             HHHHHHHHHcCCEEEEecCccccccCC----CCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCC
Confidence            888999999999999999999876510    1111111     010  12233 445589997433  3557887763  


Q ss_pred             CCccccc
Q psy10210        360 DLKYKHC  366 (435)
Q Consensus       360 ~~~~~~~  366 (435)
                      ++++.+.
T Consensus       336 ~~~~~~~  342 (500)
T 3tcm_A          336 SAPVREQ  342 (500)
T ss_dssp             CTTHHHH
T ss_pred             CHHHHHH
Confidence            5555443

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.88  E-value=5.7e-22  Score=195.55  Aligned_cols=156  Identities=13%  Similarity=0.097  Sum_probs=128.0

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~  271 (435)
                      +++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|++  .++.+|++++++++++
T Consensus        82 ~~v~~~~g~~~a~~~~~~~l~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~  153 (375)
T 3op7_A           82 EQILQTNGATGANLLVLYSLIEPGDH--------VISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP  153 (375)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred             hhEEEcCChHHHHHHHHHHhcCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc
Confidence            48999999999999999999877766        9999999999999999999999999987  3556899999999999


Q ss_pred             CceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC
Q psy10210        272 NTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF  348 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~  348 (435)
                      ++++|++++|+||||.+.+   +++|.++|++||+++|+|++|+++...     +  . +......+.++...|++|...
T Consensus       154 ~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-----~--~-~~~~~~~~~~i~~~s~sK~~~  225 (375)
T 3op7_A          154 TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-----D--V-PSIIEVYDKGIAVNSLSKTYS  225 (375)
T ss_dssp             TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-----C--C-CCHHHHCTTEEEEEESSSSSS
T ss_pred             CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-----C--C-CchhhhcCCEEEEeEChhhcC
Confidence            9999999999999999977   999999999999999999999887541     1  1 111122345677888999853


Q ss_pred             -ccCCcEEEEEeCCccccc
Q psy10210        349 -TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       349 -~p~g~g~il~~~~~~~~~  366 (435)
                       ++.++|+++. ++++.+.
T Consensus       226 ~~G~r~G~v~~-~~~l~~~  243 (375)
T 3op7_A          226 LPGIRIGWVAA-NHQVTDI  243 (375)
T ss_dssp             CGGGCCEEEEC-CHHHHHH
T ss_pred             CcccceEEEEe-CHHHHHH
Confidence             3355688665 6665543

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.88  E-value=8.8e-22  Score=193.82  Aligned_cols=164  Identities=12%  Similarity=0.028  Sum_probs=132.1

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH---HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY---RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~---~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      ..++++.+++++|.+   ++++|+|||+|+.++++++   ..+++        +|++++++|+++..+++..|++++.+|
T Consensus        34 ~~~l~~~la~~~~~~---~v~~~~ggt~al~~~~~~~~~~~~~gd--------~Vl~~~~~~~~~~~~~~~~g~~~~~~~  102 (375)
T 2fnu_A           34 SLLFEEALCEFLGVK---HALVFNSATSALLTLYRNFSEFSADRN--------EIITTPISFVATANMLLESGYTPVFAG  102 (375)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHSSCCCTTSC--------EEEECSSSCTHHHHHHHHTTCEEEECC
T ss_pred             HHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHhcccCCCCC--------EEEECCCccHhHHHHHHHCCCEEEEec
Confidence            446667778888764   7999999999999999998   44444        499999999999999999999999999


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      +++++.+|++++++++++++++|+++++   +|.+.++++|.++|++||+++|+|++|+.+..+...       .+.. .
T Consensus       103 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-------~~~~-~  171 (375)
T 2fnu_A          103 IKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK-------KVGG-F  171 (375)
T ss_dssp             BCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE-------ETTS-S
T ss_pred             cCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCe-------eccc-c
Confidence            9876789999999999889999888876   999999999999999999999999999865432100       1110 1


Q ss_pred             CCccEEEecCCCCCCccCCcEEEEEeC-Cccc
Q psy10210        334 PGVTSISVDTHKYGFTPKGSSVVLYRD-LKYK  364 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g~g~il~~~-~~~~  364 (435)
                      ..+++.+++.||++ +| |.|++++++ +++.
T Consensus       172 ~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~  201 (375)
T 2fnu_A          172 ALASVFSFHAIKPI-TT-AEGGAVVTNDSELH  201 (375)
T ss_dssp             SSEEEEECCTTSSS-CC-SSCEEEEESCHHHH
T ss_pred             CCeEEEeCCCCCCc-cc-cCceEEEeCCHHHH
Confidence            13677788888994 77 888888854 5453

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.88  E-value=2.1e-21  Score=196.58  Aligned_cols=218  Identities=13%  Similarity=0.077  Sum_probs=154.4

Q ss_pred             CccccCCCCCC-CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        101 LEYFLELPSQG-RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       101 ~~~~~~~P~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      ++|..+.|+.. .+++++.+.+.+.+....    .....|....|.+++++++++.+..                     
T Consensus        79 i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~---------------------  133 (448)
T 3aow_A           79 ISLAGGLPNPKTFPKEIIRDILVEIMEKYA----DKALQYGTTKGFTPLRETLMKWLGK---------------------  133 (448)
T ss_dssp             EECCCCCCCGGGSCHHHHHHHHHHHHHHSH----HHHHSCCCTTCCHHHHHHHHHHHHH---------------------
T ss_pred             EeCCCCCCCchhCCHHHHHHHHHHHHHhhh----HHHhCCCCCCCcHHHHHHHHHHHHH---------------------
Confidence            45555666532 355566666665554310    0012333444566666666665533                     


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                             .+|.+..+++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|+++++ 
T Consensus       134 -------~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-  197 (448)
T 3aow_A          134 -------RYGISQDNDIMITSGSQQALDLIGRVFLNPGDI--------VVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-  197 (448)
T ss_dssp             -------HHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHTTCCEEEEEEEETTE-
T ss_pred             -------hcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCE--------EEEeCCChHHHHHHHHHcCCEEEEeccCCCC-
Confidence                   233322248999999999999999999877766        9999999999999999999999999998665 


Q ss_pred             ccHHHHHHHhh----c--CceEE-EEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        260 VDLAALQSAIT----G--NTVML-VGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       260 ~d~~~l~~~i~----~--~~~~v-~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      +|+++|+++++    +  ++++| ++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     |...+++
T Consensus       198 ~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~-----g~~~~~~  272 (448)
T 3aow_A          198 MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYS-----GNPEKKI  272 (448)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCS-----SCCCCCT
T ss_pred             CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCC-----CCCCcCH
Confidence            89999999997    5  78887 568999999998   45789999999999999999999987542     2211122


Q ss_pred             -CCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        330 -DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       330 -d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                       .+...+.++...|++|++..+..+|+++.+ +++.+
T Consensus       273 ~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~-~~l~~  308 (448)
T 3aow_A          273 KALDNEGRVIYLGTFSKILAPGFRIGWMVGD-PGIIR  308 (448)
T ss_dssp             GGGCTTSCEEEEEESTTTTCGGGCCEEEEEC-HHHHH
T ss_pred             HhcCCCCCEEEEccchhhccccccEEEEEeC-HHHHH
Confidence             333345677888899995422347997665 55543

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.88  E-value=6.9e-22  Score=194.00  Aligned_cols=167  Identities=15%  Similarity=0.139  Sum_probs=129.7

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      ++++.+++++|.+++ ++++|+|+++++.++++++.+++ +.        |++++|+|+++...++..|++++.+|.+++
T Consensus        62 ~lr~~la~~~~~~~~-~v~~~~G~~~ai~~~~~~~~~~g~d~--------Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~  132 (356)
T 1fg7_A           62 AVIENYAQYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKDA--------ILYCPPTYGMYSVSAETIGVECRTVPTLDN  132 (356)
T ss_dssp             HHHHHHHHHHTSCGG-GEEEESHHHHHHHHHHHHHCCTTTCE--------EEECSSSCTHHHHHHHHHTCEEEECCCCTT
T ss_pred             HHHHHHHHHhCCChH-HEEEcCCHHHHHHHHHHHHhCCCCCE--------EEEeCCChHHHHHHHHHcCCEEEEeeCCCC
Confidence            344455555565554 89999999999999999987666 55        999999999999999999999999998877


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SL  333 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~  333 (435)
                      +.+|+++++++++ ++++|++++|+||||.+-+   +++|.++|+ +|+++|+|++|++|..      +.  ...++ ..
T Consensus       133 ~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~------~~--~~~~~~~~  202 (356)
T 1fg7_A          133 WQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP------QA--SLAGWLAE  202 (356)
T ss_dssp             SCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSG------GG--CSGGGTTT
T ss_pred             CCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcC------CC--cHHHHHhh
Confidence            7899999999988 8999999999999999955   555666666 9999999999998752      00  01222 22


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .+.+++..|++|+.. ++.++|+++. ++++.+
T Consensus       203 ~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~  234 (356)
T 1fg7_A          203 YPHLAILRTLSKAFALAGLRCGFTLA-NEEVIN  234 (356)
T ss_dssp             CTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHH
T ss_pred             CCCEEEEecchHhhcCchhhhEEEEe-CHHHHH
Confidence            356788889999842 2344798666 555544

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.88  E-value=3.1e-21  Score=189.40  Aligned_cols=172  Identities=18%  Similarity=0.141  Sum_probs=136.9

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      .++++.+++++|.+++ ++++|+|||+++.++++++.++++.        |++++|+|+++...++..|++++.+|.+++
T Consensus        70 ~~lr~~la~~~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~  140 (363)
T 3ffh_A           70 SSLRKEVADFYQLEEE-ELIFTAGVDELIELLTRVLLDTTTN--------TVMATPTFVQYRQNALIEGAEVREIPLLQD  140 (363)
T ss_dssp             HHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHCSTTCE--------EEEEESSCHHHHHHHHHHTCEEEEEECCTT
T ss_pred             HHHHHHHHHHhCCChh-hEEEeCCHHHHHHHHHHHHccCCCE--------EEEcCCChHHHHHHHHHcCCEEEEecCCCC
Confidence            3455566666666554 8999999999999999998766665        999999999999999999999999999878


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCC-CCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~  334 (435)
                      +.+|++++++++++++++|++++|+||||.+.+++++.++++.+  |+++|+|++|++|..  ..    ....... ...
T Consensus       141 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~--~~----~~~~~~~~~~~  214 (363)
T 3ffh_A          141 GEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT--PQ----PEKHEKLVRTY  214 (363)
T ss_dssp             SCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS--SC----CCCCGGGGGTC
T ss_pred             CCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC--cc----ccCHHHHhhcC
Confidence            89999999999999999999999999999999999999999887  999999999998754  10    0011111 123


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      +.++++.|++|.+ ++.|  +|+++. ++++.+.
T Consensus       215 ~~~i~~~s~sK~~-g~~G~r~G~~~~-~~~~~~~  246 (363)
T 3ffh_A          215 KNLIITRTFSKIY-GLASARVGYGIA-DKEIIRQ  246 (363)
T ss_dssp             TTEEEEEESSSTT-CCSSCCCEEEEE-CHHHHHH
T ss_pred             CCEEEEeechhhh-cCchhceeeeec-CHHHHHH
Confidence            3457778899984 5444  499666 5555443

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.88  E-value=3.4e-21  Score=188.75  Aligned_cols=244  Identities=11%  Similarity=0.055  Sum_probs=165.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+..... .+     .++    ..++++.++++++.+++ ++++|+|||+++.++++++    +.     
T Consensus        41 ~~~v~~a~~~~~~~~~~-y~-----~~~----~~~l~~~la~~~~~~~~-~i~~~~g~t~al~~~~~~~----d~-----  100 (361)
T 3ftb_A           41 PKSFLNNIDEGIKNLGV-YP-----DVN----YRRLNKSIENYLKLKDI-GIVLGNGASEIIELSISLF----EK-----  100 (361)
T ss_dssp             CHHHHTTHHHHHHGGGS-CC-----CTT----CHHHHHHHHHHHTCCSC-EEEEESSHHHHHHHHHTTC----SE-----
T ss_pred             CHHHHHHHHHHHHHhcC-CC-----Ccc----HHHHHHHHHHHhCCCcc-eEEEcCCHHHHHHHHHHHc----Cc-----
Confidence            46666666666654211 11     111    14556677777777665 8999999999999999887    44     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHc
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKY  301 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~  301 (435)
                         |+++.|+|+++...++..|++++.+|+++++.++++++++++++ ++++++++|+||||.+   +++++|.++|++|
T Consensus       101 ---vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  176 (361)
T 3ftb_A          101 ---ILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEK  176 (361)
T ss_dssp             ---EEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHH
T ss_pred             ---EEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhc
Confidence               99999999999999999999999999987777899999999988 9999999999999998   4588889999999


Q ss_pred             CCcEEEeccccchhhhcccccCCCCCCCCC-CCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210        302 GIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY  379 (435)
Q Consensus       302 ~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~  379 (435)
                      |+++|+|++|+++...  .  +.  ..... ...+.++++.|++|... ++.++|++++.++++.+........|     
T Consensus       177 ~~~li~De~~~~~~~~--~--~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~-----  245 (361)
T 3ftb_A          177 KKTIIIDEAFIEFTGD--P--SS--SFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW-----  245 (361)
T ss_dssp             TCEEEEECSSGGGTCC--T--TS--SSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT-----
T ss_pred             CCEEEEECcchhhcCC--c--cc--chhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC-----
Confidence            9999999999987652  0  00  11111 12234566779999853 34567887767777655422211111     


Q ss_pred             CCCccccCCCchHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYF-GFEAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~-g~~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                             +.+....+++.++++.. ..+...++.++..+.+.+.+++++++.
T Consensus       246 -------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  290 (361)
T 3ftb_A          246 -------NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIK  290 (361)
T ss_dssp             -------CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred             -------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence                   11222222333333320 112334445555566666666666665

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.88  E-value=1.3e-21  Score=195.47  Aligned_cols=155  Identities=19%  Similarity=0.244  Sum_probs=125.7

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhhc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAITG  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~~  271 (435)
                      +++++|+|||+|+.++++++.++++.        |++++|+|+++..+++..|++++.+|+++  ++.+ ++++++++++
T Consensus       103 ~~v~~~~g~t~a~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~  173 (409)
T 2gb3_A          103 ENVLVTNGGSEAILFSFAVIANPGDE--------ILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE  173 (409)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT
T ss_pred             HHEEEeCCHHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc
Confidence            48999999999999999998666655        99999999999999999999999999874  3444 8899999988


Q ss_pred             CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCCccEEEecCCCCC
Q psy10210        272 NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPGVTSISVDTHKYG  347 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~gvd~~~~s~hK~~  347 (435)
                      ++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     + ...++ +. ..+.|+++.|+||++
T Consensus       174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~-----~-~~~~~-~~~~~~~~i~~~s~sK~~  246 (409)
T 2gb3_A          174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR-----G-EFASA-LSIESDKVVVIDSVSKKF  246 (409)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS-----S-CCCCG-GGSCCTTEEEEEESTTTT
T ss_pred             CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccC-----C-CCCCc-cccCCCCEEEEecchhcc
Confidence            99999999999999998   57999999999999999999999987541     1 11121 11 235799999999985


Q ss_pred             CccCC--cEEEEEeCCcccc
Q psy10210        348 FTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       348 ~~p~g--~g~il~~~~~~~~  365 (435)
                       ++.|  +|+++.+++++.+
T Consensus       247 -g~~G~r~G~~~~~~~~l~~  265 (409)
T 2gb3_A          247 -SACGARVGCLITRNEELIS  265 (409)
T ss_dssp             -TCGGGCCEEEECSCHHHHH
T ss_pred             -CCccceEEEEEECcHHHHH
Confidence             5444  8997666535544

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.87  E-value=1.1e-20  Score=193.95  Aligned_cols=190  Identities=13%  Similarity=0.081  Sum_probs=140.5

Q ss_pred             cChhHHHHHHHHHHHHHHHhC-CC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC
Q psy10210        169 IFPGVCKMEAEVIKMCARMFN-GG-PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG  246 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g-~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g  246 (435)
                      ...+..++...+.+++.+..| .+ ..+++++|+|+++++.+++.++.++++.    ++++|+++.|+|+.+...++..|
T Consensus       127 ~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~----~~d~Vlv~~p~y~~~~~~~~~~g  202 (498)
T 3ihj_A          127 ASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGK----SRTGVMIPIPQYPLYSAVISELD  202 (498)
T ss_dssp             -CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGG----GSEEEEEEESCCTHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCC----CCCEEEEeCCCchhHHHHHHHcC
Confidence            345556666666666666654 32 2348999999999999999998876641    12359999999999999999999


Q ss_pred             CEEEEEecCC--CccccHHHHHHHhhc-----CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210        247 MKVKHIRLTS--SYTVDLAALQSAITG-----NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLA  316 (435)
Q Consensus       247 ~~v~~vp~~~--~~~~d~~~l~~~i~~-----~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~  316 (435)
                      ++++.+++++  ++.+|++++++++++     ++++|++++|+||||.+   +++++|+++|++||+++++|++|+.+.+
T Consensus       203 ~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~  282 (498)
T 3ihj_A          203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY  282 (498)
T ss_dssp             CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred             CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence            9999999973  568999999999986     68999999999999999   6788999999999999999999988765


Q ss_pred             hcccccCCCCCCCCCC--C------CCcc-EEEecCCCCCC--ccCCcEEEEE--eCCccccc
Q psy10210        317 PFMSAAGYPLPPFDFS--L------PGVT-SISVDTHKYGF--TPKGSSVVLY--RDLKYKHC  366 (435)
Q Consensus       317 ~~~~~~g~~~~~~d~~--~------~gvd-~~~~s~hK~~~--~p~g~g~il~--~~~~~~~~  366 (435)
                      .-    +....++.-.  .      ..+. ++..|++|...  +...+|++++  .++++.+.
T Consensus       283 ~~----~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~  341 (498)
T 3ihj_A          283 SP----DCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQ  341 (498)
T ss_dssp             CT----TCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHH
T ss_pred             CC----CCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHH
Confidence            20    0011111100  0      1222 44568999853  3466788765  45555443

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.87  E-value=4.2e-21  Score=191.42  Aligned_cols=218  Identities=13%  Similarity=0.082  Sum_probs=153.3

Q ss_pred             CccccCCCCC-CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        101 LEYFLELPSQ-GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       101 ~~~~~~~P~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      +++..+.|+. +.+++++.+.+.+.+....    .... |....|.+++++.+++++.......                
T Consensus        37 idl~~g~~~~~~~~~~~v~~a~~~~~~~~~----~~~~-y~~~~~~~~l~~~la~~~~~~~g~~----------------   95 (407)
T 2zc0_A           37 ISLAAGDPDPELIPRAVLGEIAKEVLEKEP----KSVM-YTPANGIPELREELAAFLKKYDHLE----------------   95 (407)
T ss_dssp             EECCSCCCCTTTSCHHHHHHHHHHHHHHCG----GGGS-CCCTTCCHHHHHHHHHHHHHHSCCC----------------
T ss_pred             EeCCCCCCCchhCCHHHHHHHHHHHHhhcc----cccc-CCCCCCCHHHHHHHHHHHHHhcCCC----------------
Confidence            3444455542 3456677777776665321    0112 3344456677777776664422110                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                                .++ +++++|+|+++|+.+++++++++++.        |++++|+|+++...++..|++++.+|+++++ 
T Consensus        96 ----------~~~-~~v~~t~g~t~a~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-  155 (407)
T 2zc0_A           96 ----------VSP-ENIVITIGGTGALDLLGRVLIDPGDV--------VITENPSYINTLLAFEQLGAKIEGVPVDNDG-  155 (407)
T ss_dssp             ----------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHTTTCEEEEEEEETTE-
T ss_pred             ----------CCc-ceEEEecCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHHcCCEEEEcccCCCC-
Confidence                      123 48999999999999999999766655        9999999999999999999999999987655 


Q ss_pred             ccHHHHHHHhh----c--CceEE-EEeCCCCCcccccCHH---HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        260 VDLAALQSAIT----G--NTVML-VGSMPNFPYGTMDDIG---AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       260 ~d~~~l~~~i~----~--~~~~v-~~~~p~nptG~~~~i~---~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      +|+++++++++    +  ++++| ++++|+||||.+.+.+   +|.++|++||+++|+|++|+++.+.     |....++
T Consensus       156 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~  230 (407)
T 2zc0_A          156 MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYE-----GGDIVPL  230 (407)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSS-----CSSCCCG
T ss_pred             CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccC-----CCCCCCh
Confidence            89999999998    6  78887 5789999999996665   9999999999999999999987542     1111111


Q ss_pred             -CCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        330 -DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       330 -d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                       .+...+.++++.|++|++.++..+|+++.+ +++.+
T Consensus       231 ~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~  266 (407)
T 2zc0_A          231 KALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEILK  266 (407)
T ss_dssp             GGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHHHH
T ss_pred             hhcCCCCCEEEEcccccccCCCcceEEEecC-HHHHH
Confidence             222224567778899995422357886654 55544

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.87  E-value=1.8e-20  Score=184.66  Aligned_cols=203  Identities=10%  Similarity=0.017  Sum_probs=152.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .++++.+++.+.+...... ...+..... .++++.+.+++.+.+|.+ ..+++++|+|+++++.++++++.++++.   
T Consensus        44 ~~~~v~~a~~~~~~~~~~~-~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~---  118 (369)
T 3cq5_A           44 PSEALVADLVATVDKIATE-LNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT---  118 (369)
T ss_dssp             CCHHHHHHHHHHHHHHGGG-TTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCE---
T ss_pred             CCHHHHHHHHHHHHhcccc-cccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCE---
Confidence            3677777777776542110 111111122 466666666666665543 2358999999999999999998766655   


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY  301 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~  301 (435)
                           |++++|+|+++...++..|++++.+|.++++.+|++++++++++ ++++|++++|+||||.+.+++++.++|+.+
T Consensus       119 -----Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~  193 (369)
T 3cq5_A          119 -----ALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVA  193 (369)
T ss_dssp             -----EEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHC
T ss_pred             -----EEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence                 99999999999999999999999999887778999999999987 899999999999999999999999999999


Q ss_pred             CCcEEEeccccchhhhcccccCCCCCCCCC-CCCC-ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        302 GIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPG-VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       302 ~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~g-vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ++++|+|++|+++...        ...... ...+ .++++.|+||++. ++.++|+++.+ +++.+
T Consensus       194 ~~~li~De~~~~~~~~--------~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~  251 (369)
T 3cq5_A          194 PGIVIVDEAYAEFSPS--------PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN-PAFID  251 (369)
T ss_dssp             SSEEEEECTTGGGCCS--------CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC-THHHH
T ss_pred             CCEEEEECCchhhcCC--------cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC-HHHHH
Confidence            9999999999987531        111222 2234 6788899999953 22347986665 45443

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.87  E-value=2.2e-21  Score=191.18  Aligned_cols=164  Identities=18%  Similarity=0.163  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ..++++.++++++.+   ++++|+|||+|+.++++++ ..+++.        |++++++|+++..+++..|++++.+|++
T Consensus        40 ~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~~~~~~~~~gd~--------v~~~~~~~~~~~~~~~~~g~~~~~~~~~  108 (374)
T 3uwc_A           40 LEKFEKRFAALHNAP---HAIGVGTGTDALAMSFKMLNIGAGDE--------VITCANTFIASVGAIVQAGATPVLVDSE  108 (374)
T ss_dssp             HHHHHHHHHHHTTCS---EEEEESCHHHHHHHHHHHTTCCTTCE--------EEEESSSCHHHHHHHHHTTCEEEEECBC
T ss_pred             HHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHcCCCCCCE--------EEECCCccHHHHHHHHHcCCEEEEEecC
Confidence            345566777777764   6899999999999999988 555555        9999999999999999999999999998


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      +++.+|++++++++++++++|+   |+||||.+.++++|.++|++||+++|+|++|+.+.. +.   +   .+..   ..
T Consensus       109 ~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~-~~---~---~~~~---~~  175 (374)
T 3uwc_A          109 NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGR-IN---D---KFVG---SW  175 (374)
T ss_dssp             TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ET---T---EETT---SS
T ss_pred             CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCce-eC---C---eecc---cc
Confidence            7888999999999998888887   889999999999999999999999999999986543 11   0   0111   11


Q ss_pred             ccEEEecCC--CCCCccCCcEEEEEeCCccc
Q psy10210        336 VTSISVDTH--KYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       336 vd~~~~s~h--K~~~~p~g~g~il~~~~~~~  364 (435)
                      .|+++.|+|  |++.++...|+++.+++++.
T Consensus       176 ~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~  206 (374)
T 3uwc_A          176 GQFACFSLHPLKNLNVWSDAGVIITHSDEYA  206 (374)
T ss_dssp             SSEEEEECSSSSSSCCSSCCEEEEESCHHHH
T ss_pred             ccEEEEeCCCCCcCCccceeEEEEeCCHHHH
Confidence            488889977  99533233566666665553

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.87  E-value=2.2e-21  Score=191.30  Aligned_cols=162  Identities=19%  Similarity=0.250  Sum_probs=128.9

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ...++++.+++++|.+   ++++|+|||+|+.++++++ ..+++.        |+++.++|+++..+++..|++++.+|+
T Consensus        37 ~~~~l~~~la~~~~~~---~~i~~~sgt~al~~~l~~l~~~~gd~--------Vi~~~~~~~~~~~~~~~~g~~~~~~~~  105 (373)
T 3frk_A           37 EDKKFEQEFADYCNVN---YCIGCGNGLDALHLILKGYDIGFGDE--------VIVPSNTFIATALAVSYTGAKPIFVEP  105 (373)
T ss_dssp             HHHHHHHHHHHHHTSS---EEEEESCHHHHHHHHHHHTTCCTTCE--------EEEETTSCTHHHHHHHHHSCEEEEECE
T ss_pred             hHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHcCCCCcCE--------EEECCCCcHHHHHHHHHcCCEEEEEec
Confidence            3455666777788764   6899999999999999988 555554        999999999999999999999999999


Q ss_pred             C-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        255 T-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       255 ~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      + +++.+|++++++++++++++|+   ++||+|.+.++++|.++|++||+++|+|++|+.+.. +           +...
T Consensus       106 ~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~-----------~~~~  170 (373)
T 3frk_A          106 DIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSL-Y-----------KGMK  170 (373)
T ss_dssp             ETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCE-E-----------TTEE
T ss_pred             cccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCE-E-----------CCEe
Confidence            8 6788999999999998999888   677899999999999999999999999999986543 1           1111


Q ss_pred             CC--ccEEEec--CCCCCCcc-CCcEEEEEeCCccc
Q psy10210        334 PG--VTSISVD--THKYGFTP-KGSSVVLYRDLKYK  364 (435)
Q Consensus       334 ~g--vd~~~~s--~hK~~~~p-~g~g~il~~~~~~~  364 (435)
                      .+  .|++++|  .||++ ++ ...|+++.+++++.
T Consensus       171 ~~~~~d~~~~S~~~~K~l-~~~g~gg~~~~~~~~~~  205 (373)
T 3frk_A          171 VGSLGDAAGFSFYPAKNL-GSLGDGGAVVTNDKDLA  205 (373)
T ss_dssp             TTSSSSEEEEECCTTSSS-CCSSSCEEEEESCHHHH
T ss_pred             ccccccEEEEeCcCCCcc-CccceeEEEEeCCHHHH
Confidence            12  4666666  67995 55 33466555555443

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.87  E-value=1.1e-20  Score=185.69  Aligned_cols=171  Identities=16%  Similarity=0.102  Sum_probs=130.8

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS  257 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~  257 (435)
                      .++++.+++++|.+++ ++++|+|+++++.++++++  +++.        |++++|+|+++...++..|++++.+|.+.+
T Consensus        62 ~~l~~~la~~~~~~~~-~v~~~~g~~~al~~~~~~~--~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~  130 (364)
T 1lc5_A           62 FHLHQALARHHQVPAS-WILAGNGETESIFTVASGL--KPRR--------AMIVTPGFAEYGRALAQSGCEIRRWSLREA  130 (364)
T ss_dssp             HHHHHHHHHHHTSCGG-GEEEESSHHHHHHHHHHHH--CCSE--------EEEEESCCTHHHHHHHHTTCEEEEEECCGG
T ss_pred             HHHHHHHHHHHCcCHH-HEEECCCHHHHHHHHHHHc--CCCe--------EEEeCCCcHHHHHHHHHcCCeEEEEeCCcc
Confidence            3455566666776554 8999999999999999988  4444        999999999999999999999999998742


Q ss_pred             cccc-HHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-C
Q psy10210        258 YTVD-LAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-S  332 (435)
Q Consensus       258 ~~~d-~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~  332 (435)
                      ..++ ++++.+.++++++++++++|+||||.+-+   +++|.++|++||+++|+|++|+++...     +.  ..++. .
T Consensus       131 ~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~--~~~~~~~  203 (364)
T 1lc5_A          131 DGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH-----ET--GFIPALK  203 (364)
T ss_dssp             GTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT-----CC--CSGGGCT
T ss_pred             cccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccC-----cc--chhhHhc
Confidence            2234 46666677778899999999999999965   999999999999999999999987541     11  12222 2


Q ss_pred             CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        333 LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ..+.++++.|+||++. ++.++|++++.++++.+.
T Consensus       204 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  238 (364)
T 1lc5_A          204 DNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR  238 (364)
T ss_dssp             TCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHH
T ss_pred             cCCCEEEEEECchhhcCCccceEEEEECCHHHHHH
Confidence            3467888999999953 224479866366665443

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.87  E-value=3.3e-21  Score=189.37  Aligned_cols=198  Identities=12%  Similarity=0.062  Sum_probs=148.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|.+++++.+.+....   .+..   +..    .++++.+++++|.+++ ++++|+|+++++.++++++.++++.    
T Consensus        44 ~~~~v~~a~~~~~~~~~---~y~~---~~~----~~lr~~la~~~~~~~~-~v~~~~g~~~a~~~~~~~l~~~gd~----  108 (365)
T 3get_A           44 TPPKAIECLRQNANKAH---LYPD---DSM----IELKSTLAQKYKVQNE-NIIIGAGSDQVIEFAIHSKLNSKNA----  108 (365)
T ss_dssp             SCHHHHHHHHHHGGGTT---SCCC---TTC----HHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHCCTTCE----
T ss_pred             CCHHHHHHHHHHHHhhc---cCCC---CCh----HHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHHHhCCCCE----
Confidence            35677777777665311   1111   111    2566677788887654 8999999999999999998777766    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEec-CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH--H
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE--K  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~--~  300 (435)
                          |++++|+|+++...++..|++++.+|+ ++++ +|++++++++++++++|++++|+||||.+-+++++.++++  +
T Consensus       109 ----vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~  183 (365)
T 3get_A          109 ----FLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVN  183 (365)
T ss_dssp             ----EEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSC
T ss_pred             ----EEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCC
Confidence                999999999999999999999999998 5778 9999999999999999999999999999988888888887  7


Q ss_pred             cCCcEEEeccccchhh--hcccccCCCCCCCC-CCCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        301 YGIPVHVDCCLGGFLA--PFMSAAGYPLPPFD-FSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       301 ~~~~livD~~~~~~~~--~~~~~~g~~~~~~d-~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      +|+++|+|++|+++.+  .  .....  .... ....+.++++.|+||+.. ++.++|+++. ++++.+.
T Consensus       184 ~~~~li~De~~~~~~~~~~--~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~  248 (365)
T 3get_A          184 EDCLVVIDAAYNEFASFKD--SKKHL--EPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISA  248 (365)
T ss_dssp             TTSEEEEECTTHHHHHHHC--GGGCC--CHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHH
T ss_pred             CCcEEEEeCccHHHhcccC--Ccccc--cHhHHhccCCCEEEEeecchHhcCcchheEEEEc-CHHHHHH
Confidence            7999999999998763  1  00000  0111 112346788889999843 3456798666 5555443

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.87  E-value=5.3e-21  Score=192.23  Aligned_cols=187  Identities=12%  Similarity=0.049  Sum_probs=140.9

Q ss_pred             cccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC------CCceEEcCChHHHHHHHHH
Q psy10210        138 SGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP------ETCGCMTSGGTESIMMACK  211 (435)
Q Consensus       138 ~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~------~~~~~~t~ggteai~~a~~  211 (435)
                      .|....|.+++++++++++.......                          ..+      .+++++|+|+++++.++++
T Consensus        73 ~Y~~~~G~~~lr~~ia~~l~~~~g~~--------------------------~~~~~~~~~~~~i~~t~G~~~al~~~~~  126 (425)
T 2r2n_A           73 QYSPSAGIPELLSWLKQLQIKLHNPP--------------------------TIHYPPSQGQMDLCVTSGSQQGLCKVFE  126 (425)
T ss_dssp             SCCCTTCCHHHHHHHHHHHHHHHCCT--------------------------TTTSCGGGTCEEEEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHhcCCC--------------------------CccccccCCcCcEEEeCcHHHHHHHHHH
Confidence            34556677888888887776543221                          011      2489999999999999999


Q ss_pred             HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh------------cCceEEEE-
Q psy10210        212 AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT------------GNTVMLVG-  278 (435)
Q Consensus       212 a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~------------~~~~~v~~-  278 (435)
                      ++.++++.        |++++|+|+++...++..|++++.+|+++++ +|+++++++++            +++++|++ 
T Consensus       127 ~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~  197 (425)
T 2r2n_A          127 MIINPGDN--------VLLDEPAYSGTLQSLHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTV  197 (425)
T ss_dssp             HHCCTTCE--------EEEESSCCHHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEEC
T ss_pred             HhCCCCCE--------EEEeCCCcHHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEEC
Confidence            99877766        9999999999999999999999999987654 89999999987            35788866 


Q ss_pred             eCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcE
Q psy10210        279 SMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSS  354 (435)
Q Consensus       279 ~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g  354 (435)
                      ++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |.+.++ ..+...+.+++..|++|++.+...+|
T Consensus       198 ~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG  272 (425)
T 2r2n_A          198 PNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFN-----KFRVPTFLSMDVDGRVIRADSFSKIISSGLRIG  272 (425)
T ss_dssp             CSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-----SSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCE
T ss_pred             CCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCC-----CCCCCCccccCCCCCEEEEccchhhccCccceE
Confidence            69999999994   4669999999999999999999987542     211112 22223345788889999953223479


Q ss_pred             EEEEeCCcccc
Q psy10210        355 VVLYRDLKYKH  365 (435)
Q Consensus       355 ~il~~~~~~~~  365 (435)
                      +++.++ ++.+
T Consensus       273 ~~~~~~-~l~~  282 (425)
T 2r2n_A          273 FLTGPK-PLIE  282 (425)
T ss_dssp             EEEEEH-HHHH
T ss_pred             EEecCH-HHHH
Confidence            977664 4433

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.87  E-value=2.5e-21  Score=192.17  Aligned_cols=251  Identities=11%  Similarity=0.014  Sum_probs=173.3

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+..+....+.+ ....+..+...++++.+++++|.+  ++++ +++|++++..++.++.++++.    
T Consensus        58 ~~~~v~~a~~~~~~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~~~~--~~i~-~~sGt~a~~~~l~~~~~~gd~----  129 (399)
T 3tqx_A           58 DHPALIKTAQTVVEQYGFGMASV-RFICGTQTIHKELEKDISEFLGTD--DTIL-YSSCFDANGGLFETLLGPEDA----  129 (399)
T ss_dssp             TCHHHHHHHHHHHHHHCSCCCSC-CCCCCCBHHHHHHHHHHHHHHTCS--EEEE-ESCHHHHHHTTHHHHCCTTCE----
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCc-CccccCchHHHHHHHHHHHHHCCC--cEEE-ECchHHHHHHHHHHhcCCCCE----
Confidence            46889999988887754322211 112334566778888999999875  2444 455689999999988776665    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                          |+++.|+|+++...++..|++++.+|.     .|++++++++++      ++++|++++|+||||.+.++++|.++
T Consensus       130 ----v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l  200 (399)
T 3tqx_A          130 ----IISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDL  200 (399)
T ss_dssp             ----EEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHH
T ss_pred             ----EEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHH
Confidence                999999999999999999999999985     467788888875      89999999999999999999999999


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCCCCCCC--CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP  375 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~  375 (435)
                      |++||+++|+|++|+.+...   ..+.+  ..+..  ..+.|+++.|+||++.|+.| |+++. ++++.+........|.
T Consensus       201 ~~~~~~~li~De~~~~~~~~---~~~~~--~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~-~~~~~~~~~~~~~~~~  273 (399)
T 3tqx_A          201 ADKYNALVMVDDSHAVGFIG---ENGRG--TPEYCGVADRVDILTGTLGKALGGASG-GYTSG-HKEIIEWLRNRSRPYL  273 (399)
T ss_dssp             HHHTTCEEEEECTTTTTTSS---TTSCC--HHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEE-CHHHHHHHHHHCHHHH
T ss_pred             HHHcCCEEEEECCccccccC---CCCCc--hHHhhCCCCCCcEEEecchHhcccCce-EEEEc-CHHHHHHHHHhCccee
Confidence            99999999999999633221   11110  01111  23579999999999654766 87554 4555433211111111


Q ss_pred             CCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        376 GGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       376 gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                              ..++.+...++++.++++.+  +.+...+++++..+.+.+.++++
T Consensus       274 --------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  318 (399)
T 3tqx_A          274 --------FSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL  318 (399)
T ss_dssp             --------SSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------ccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence                    11223333445566666655  34666677777777777776654

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.87  E-value=3.5e-22  Score=196.73  Aligned_cols=257  Identities=12%  Similarity=-0.002  Sum_probs=178.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC----CCcChhHHHHHHHHHHHHHHHhCCCCCCceEE-cCChHHHHHHHHHHHHHH--h
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH----PDIFPGVCKMEAEVIKMCARMFNGGPETCGCM-TSGGTESIMMACKAYRDY--A  217 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~-t~ggteai~~a~~a~~~~--~  217 (435)
                      ++++.+++.+.+..+. .|+..    .+..+.+.++..++++.+++++|++++.++++ |+|||+++++++..+..+  +
T Consensus        25 p~~Vl~a~~~~~~~~~-~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~G  103 (377)
T 3e77_A           25 PHSVLLEIQKELLDYK-GVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAG  103 (377)
T ss_dssp             CHHHHHHHHHTSSSGG-GSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTT
T ss_pred             CHHHHHHHHHHHHhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCC
Confidence            6777777777665433 23332    23467788999999999999999976557888 689999999999998754  4


Q ss_pred             hhhcCCCCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210        218 REEKGISLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA  295 (435)
Q Consensus       218 ~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~  295 (435)
                      ++        +++....+.+  +.+.++..|..++.+|++.++..++++++.+++++|++|.+++..|.||++.|+    
T Consensus       104 d~--------v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi----  171 (377)
T 3e77_A          104 RC--------ADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF----  171 (377)
T ss_dssp             CE--------EEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS----
T ss_pred             Ce--------EEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh----
Confidence            44        8777777666  345566678888878887666677888877888899999999999999999888    


Q ss_pred             HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC
Q psy10210        296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP  375 (435)
Q Consensus       296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~  375 (435)
                       +|+++|+++|+|++++.+           ..|+|+...+  ++++++||++ ||.|+|+++++++.+... ....+.+.
T Consensus       172 -i~~~~~~~~~vD~~q~~g-----------~~~id~~~~~--~~~~s~~K~~-gp~G~g~l~~~~~~l~~~-~~~~p~~~  235 (377)
T 3e77_A          172 -IPDVKGAVLVCDMSSNFL-----------SKPVDVSKFG--VIFAGAQKNV-GSAGVTVVIVRDDLLGFA-LRECPSVL  235 (377)
T ss_dssp             -CCCCTTCCEEEECTTTTT-----------SSCCCGGGCS--EEEEEGGGTT-SCTTCEEEEEETTSCSCC-CTTSCGGG
T ss_pred             -hhccCCCEEEEEcccccC-----------CCCCchhhcC--EEEEeccccc-CCCccEEEEEcHHHHhhc-cCCCCchh
Confidence             478899999999998644           3378877666  5889999996 899999988876544221 11111111


Q ss_pred             C--CCCCCCccccCCCchHHHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        376 G--GNYGSPSVSGSRSGGIIATCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       376 g--g~~~~~~~~gsr~~~~ia~~~a~l~~~g----~~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                      .  .........++.+...++++-++++.+.    .+...++.+++.+++.+.+++++++.
T Consensus       236 ~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~  296 (377)
T 3e77_A          236 EYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY  296 (377)
T ss_dssp             CHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSE
T ss_pred             hHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            0  0000112234555555666667776654    44455555555555555566665544

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.86  E-value=1.7e-21  Score=190.28  Aligned_cols=196  Identities=15%  Similarity=0.191  Sum_probs=146.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++++++.+....  +..      ..+......++++++++++| . +.++++|+|||+|+.+++++++++++.    
T Consensus        20 ~~~~v~~a~~~~~~~--~~~------~~~~~~~~~~l~~~la~~~g-~-~~~v~~~~~gt~a~~~al~~~~~~gd~----   85 (356)
T 1v72_A           20 ASPEVAQALVKHSSG--QAG------PYGTDELTAQVKRKFCEIFE-R-DVEVFLVPTGTAANALCLSAMTPPWGN----   85 (356)
T ss_dssp             CCHHHHHHHHHTTSS--CCC------STTCSHHHHHHHHHHHHHHT-S-CCEEEEESCHHHHHHHHHHTSCCTTEE----
T ss_pred             CCHHHHHHHHhhccC--ccc------ccccchHHHHHHHHHHHHhC-C-CCcEEEeCCccHHHHHHHHHhcCCCCE----
Confidence            367777777665321  011      11123566778889999998 3 336899999999999999998766665    


Q ss_pred             CCCeEEEeCCCchhHHHH--HHHc--CCEEEEEecCCCccccHHHHHH-Hhhc-------CceEEEEeCCCCCccc---c
Q psy10210        224 SLPEIVLPTTAHPAFDKA--ANYF--GMKVKHIRLTSSYTVDLAALQS-AITG-------NTVMLVGSMPNFPYGT---M  288 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~--~~~~--g~~v~~vp~~~~~~~d~~~l~~-~i~~-------~~~~v~~~~p~nptG~---~  288 (435)
                          |++++++|.++...  +...  |++++.+|.+ ++.+|++++++ ++++       ++++|++++|+| ||.   .
T Consensus        86 ----vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~  159 (356)
T 1v72_A           86 ----IYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTL  159 (356)
T ss_dssp             ----EEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCH
T ss_pred             ----EEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCH
Confidence                99999999987766  7777  9999999875 57899999999 8875       689999999986 999   5


Q ss_pred             cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      +++++|.++|++||+++|+|++|+.+...+.   +.....+.+ ..++|++++++||+ ++|.|+|+++. ++++.+
T Consensus       160 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~~-~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~  230 (356)
T 1v72_A          160 DEIEAIGDVCKSSSLGLHMDGSRFANALVSL---GCSPAEMTW-KAGVDALSFGATKN-GVLAAEAIVLF-NTSLAT  230 (356)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEETTHHHHHHHH---TCCTTTTTG-GGTCCEEEECCGGG-TCSSCEEEEES-SGGGHH
T ss_pred             HHHHHHHHHHHHcCCeEEEEchhhHhHhccC---CCCHHHhhh-hhcCCEEEEecccC-CCcCccEEEEE-CHHHHh
Confidence            8899999999999999999999987643221   221111111 13678999999999 56888778544 666544

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.86  E-value=1.8e-21  Score=195.37  Aligned_cols=214  Identities=8%  Similarity=0.030  Sum_probs=154.2

Q ss_pred             CccccC---CCCCC-CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        101 LEYFLE---LPSQG-RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       101 ~~~~~~---~P~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      +++..+   -|+.. +.++.+.+.+.+.+...      ....|....|.+++++++++.+.......             
T Consensus        52 i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-------------  112 (420)
T 4f4e_A           52 VNLGVGVYTNEDGKIPLLRAVRDAEKARVEAG------LPRGYLPIDGIAAYDASVQKLLLGDDSPL-------------  112 (420)
T ss_dssp             EECCCCSCCCTTSCCCCCHHHHHHHHHHHHTC------CCCCCCCTTCCHHHHHHHHHHHHCTTCHH-------------
T ss_pred             EEeeeeeeECCCCCccCcHHHHHHHHHHhccC------CCCCCCCCCCcHHHHHHHHHHhcCCCccc-------------
Confidence            445555   24432 22377888887776642      22345566678888888888875421100             


Q ss_pred             HHHHHHHHHHHhCCCCCC--ceEEcCChHHHHHHHHH--HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE
Q psy10210        177 EAEVIKMCARMFNGGPET--CGCMTSGGTESIMMACK--AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI  252 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~--~~~~t~ggteai~~a~~--a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v  252 (435)
                                   . +++  ++++|+||++|+.++++  ++.++++.        |++++|+|+++...++..|++++.+
T Consensus       113 -------------~-~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~--------Vlv~~p~~~~~~~~~~~~g~~~~~v  170 (420)
T 4f4e_A          113 -------------I-AAGRVVTAQALGGTGALKIGADFLRTLNPKAK--------VAISDPSWENHRALFDMAGFEVVAY  170 (420)
T ss_dssp             -------------H-HTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCC--------EEEEESCCHHHHHHHHHTTCCEEEE
T ss_pred             -------------c-ccCceEEEECCccHHHHHHHHHHHHHhCCCCE--------EEEeCCCcHhHHHHHHHcCCeEEEe
Confidence                         0 123  79999999999999954  45666666        9999999999999999999999999


Q ss_pred             ec--CCCccccHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        253 RL--TSSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       253 p~--~~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      |+  ++++.+|+++++++++   ++++++++++|+||||.+   +++++|+++|++||+++|+|++|+++.....+. ..
T Consensus       171 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~-~~  249 (420)
T 4f4e_A          171 PYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEAD-AA  249 (420)
T ss_dssp             ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGG-GH
T ss_pred             eeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchh-hH
Confidence            98  3578899999999998   678999999999999998   668899999999999999999998876520000 00


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCcc--CCcEEEEE
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTP--KGSSVVLY  358 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p--~g~g~il~  358 (435)
                      ....+. ...+.++++.|++|. +++  .++|+++.
T Consensus       250 ~~~~~~-~~~~~~i~~~S~SK~-~~~~G~RiG~~~~  283 (420)
T 4f4e_A          250 AVRLFA-AANLNVFVSSSFSKS-FSLYGERVGALSI  283 (420)
T ss_dssp             HHHHHH-HTTCCEEEEEECTTT-TTCGGGCEEEEEE
T ss_pred             HHHHHH-hcCCCEEEEEeCCcc-CcCcCCCcEEEEE
Confidence            000010 123457788899998 454  44788764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.86  E-value=6.3e-22  Score=200.34  Aligned_cols=218  Identities=14%  Similarity=0.063  Sum_probs=153.3

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ....++++++++ +|.+  +++++|+|+|+|+.++++++.++++.        |++++++|.++..++...|++++.++.
T Consensus        57 ~~~~~~~~~la~-~g~~--~~v~~~~G~t~a~~~~~~a~~~~gd~--------Vlv~~~~h~s~~~~~~~~G~~~~~v~~  125 (446)
T 2x3l_A           57 EVILKSMKQVEK-HSDY--DGYFLVNGTTSGILSVIQSFSQKKGD--------ILMARNVHKSVLHALDISQQEGHFIET  125 (446)
T ss_dssp             SHHHHHHHHHCS-CTTE--EEEEESSHHHHHHHHHHHTTTTSSSC--------EEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred             hHHHHHHHHHHh-cCCC--ceEEEeCCHHHHHHHHHHHhcCCCCE--------EEEecCccHHHHHHHHHcCCeEEEEeC
Confidence            455778889999 9876  47999999999999999998766665        999999999999999999999999998


Q ss_pred             --CCC----ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        255 --TSS----YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       255 --~~~----~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                        +++    +.+|++++   +++++++|+++++ |++|.+.++++|.++|++||+++|+|++|++ .+.|.+.      +
T Consensus       126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~------~  194 (446)
T 2x3l_A          126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGF------P  194 (446)
T ss_dssp             EECTTTSSEEEEEC----------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTS------C
T ss_pred             eeccccCcCCCCCHHHH---cCCCceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCC------C
Confidence              554    66888888   5678999999995 5599999999999999999999999999987 3323211      3


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc---H
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG---F  405 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g---~  405 (435)
                      ++....|+|+++.|+||+++++.|+|+++.+++.+....+.....        ....++.+...++++.++++.+.   .
T Consensus       195 ~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~--------~~~~~s~~~~~~aal~~a~~~l~~~g~  266 (446)
T 2x3l_A          195 DSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLS--------YFQTSSPSYLIMASLESAAQFYKTYDS  266 (446)
T ss_dssp             CCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHH--------HHSCSSCCHHHHHHHHHHHHHHHHCCC
T ss_pred             CChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHH--------HHcCCCchHHHHHHHHHHHHHHHHhCH
Confidence            444445689999999998788889999888765432111000000        00123444444455555555543   3


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy10210        406 EAQVWICVRYHFNYKSC  422 (435)
Q Consensus       406 ~g~~~~~~~~~~~~~~~  422 (435)
                      +.+.++.+++.+.+++.
T Consensus       267 ~~~~~~~~~l~~~l~~~  283 (446)
T 2x3l_A          267 TLFFAKRAQLIECLENK  283 (446)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            33555555555555444

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.86  E-value=1.8e-21  Score=198.88  Aligned_cols=171  Identities=13%  Similarity=0.096  Sum_probs=133.1

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCC---ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH-------
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPET---CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK-------  240 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~---~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~-------  240 (435)
                      +...++|.++++++++++|.+++.   ++++++|+ +++..++.++.+++|.        |++++++|.++..       
T Consensus        86 ~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~--------Vl~~~~~~~~~~~~~~~~~~  156 (483)
T 1rv3_A           86 EHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGR--------IMGLDLPDGGHLTHGFMTDK  156 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCE--------EEEECGGGTCCGGGCCBCSS
T ss_pred             hhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCE--------EEEecCccCcCcchhhhhcc
Confidence            456677888889999999987542   36777766 8999989998877776        9999999887643       


Q ss_pred             -HHHHcC--CEEEEEecC-CCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210        241 -AANYFG--MKVKHIRLT-SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL  315 (435)
Q Consensus       241 -~~~~~g--~~v~~vp~~-~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~  315 (435)
                       .+...|  .+.+.++++ +++.+|+++++++++ .+|++|++ +++|++ .+.++++|.++|++||+++++|++|+.+.
T Consensus       157 ~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~  234 (483)
T 1rv3_A          157 KKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGL  234 (483)
T ss_dssp             CBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHH
T ss_pred             cCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcc
Confidence             233344  455555556 678899999999998 79999999 888888 88899999999999999999999987554


Q ss_pred             hhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        316 APFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       316 ~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                      ...    +....++    .++|+++.|+||++.||.| |+++++++
T Consensus       235 ~~~----~~~~~p~----~~~div~~s~~K~l~Gprg-G~i~~~~~  271 (483)
T 1rv3_A          235 VVA----GVVPSPF----EHCHVVTTTTHKTLRGCRA-GMIFYRRG  271 (483)
T ss_dssp             HHH----TSSCCGG----GTCSEEEEESSGGGCCCSC-EEEEEECS
T ss_pred             ccc----CCCCCCC----CCCcEEEecCcccCCCCCc-eEEEEcch
Confidence            421    2111122    2689999999998778888 99888875

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.86  E-value=2.8e-21  Score=194.22  Aligned_cols=157  Identities=17%  Similarity=0.135  Sum_probs=124.2

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc--
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG--  271 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--  271 (435)
                      +++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|+++++ +|++++++++++  
T Consensus       110 ~~v~~t~G~~~al~~~~~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~  180 (425)
T 1vp4_A          110 DNLIFTVGSQQALDLIGKLFLDDESY--------CVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFD  180 (425)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHH
T ss_pred             ccEEEeccHHHHHHHHHHHhCCCCCE--------EEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhh
Confidence            48999999999999999998766665        9999999999999999999999999987655 899999999876  


Q ss_pred             ------CceEE-EEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEE
Q psy10210        272 ------NTVML-VGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSIS  340 (435)
Q Consensus       272 ------~~~~v-~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~  340 (435)
                            ++++| ++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     |....++ .+...+.++++
T Consensus       181 ~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~i~~  255 (425)
T 1vp4_A          181 KNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYE-----GETVDPIFKIGGPERVVLL  255 (425)
T ss_dssp             HTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCS-----SCCCCCHHHHHCTTTEEEE
T ss_pred             hcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCC-----CCCCcCHHHhCCCCCEEEE
Confidence                  78887 578999999998   45789999999999999999999987541     1111111 11223457888


Q ss_pred             ecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        341 VDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       341 ~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      .|++|++.++..+|+++.+ +++.+
T Consensus       256 ~s~sK~~~~G~r~G~~~~~-~~~~~  279 (425)
T 1vp4_A          256 NTFSKVLAPGLRIGMVAGS-KEFIR  279 (425)
T ss_dssp             EESTTTTCGGGCEEEEECC-HHHHH
T ss_pred             eccccccccccceEEEeeC-HHHHH
Confidence            8999995422347986655 55543

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.86  E-value=2.5e-20  Score=184.99  Aligned_cols=165  Identities=18%  Similarity=0.153  Sum_probs=129.2

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ..++++.+++++|.+   ++++|+|||+|+.+++.++ ..+++.        |++++++|+++..+++..|++++.+|++
T Consensus        58 ~~~l~~~la~~~~~~---~~i~~~~gt~al~~~l~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~~~~~  126 (391)
T 3dr4_A           58 IVEFEKAFADYCGVK---HAIACNNGTTALHLALVAMGIGPGDE--------VIVPSLTYIASANSVTYCGATPVLVDND  126 (391)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHTCCTTCE--------EEEESSSCTHHHHHHHHTTCEEEEECBC
T ss_pred             HHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHcCCCCcCE--------EEECCCchHHHHHHHHHCCCEEEEEecC
Confidence            345556667777664   6789999999999999998 555555        9999999999999999999999999998


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                       +++.+|++++++++++++++|+   ++||||.+.++++|.++|++||+++|+|++|+.+.......       .. ...
T Consensus       127 ~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-------~~-~~~  195 (391)
T 3dr4_A          127 PRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKK-------SG-SLG  195 (391)
T ss_dssp             TTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE-------TT-SSS
T ss_pred             ccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCee-------ec-ccC
Confidence             6788999999999998998887   56799999999999999999999999999998544321100       11 011


Q ss_pred             CccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      .+++++++.||++.+ ...|+++.+++++.
T Consensus       196 di~~~S~s~~K~l~~-g~gg~~~~~~~~~~  224 (391)
T 3dr4_A          196 DCATFSFFGNAIITT-GEGGMITTNDDDLA  224 (391)
T ss_dssp             SEEEEECBTTSSSCC-BSCEEEEESCHHHH
T ss_pred             CEEEEECCCCCcCCc-CCeEEEEECCHHHH
Confidence            366777779999644 33567666665553

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.86  E-value=1.1e-20  Score=186.16  Aligned_cols=164  Identities=21%  Similarity=0.235  Sum_probs=128.8

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ..++++.+++++|.+   ++++|+|||+|+.++++++ ..+++.        |+++.++|+++..+++..|++++.+|++
T Consensus        37 ~~~l~~~la~~~~~~---~~~~~~sGt~al~~al~~~~~~~gd~--------Vi~~~~~~~~~~~~~~~~G~~~~~~~~~  105 (367)
T 3nyt_A           37 VTELEDRLADFVGAK---YCISCANGTDALQIVQMALGVGPGDE--------VITPGFTYVATAETVALLGAKPVYVDID  105 (367)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHTTCCTTCE--------EEEESSSCTHHHHHHHHTTCEEEEECBC
T ss_pred             HHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhCCCCcCE--------EEECCCccHHHHHHHHHcCCEEEEEecC
Confidence            445566777888764   6899999999999999988 455554        9999999999999999999999999998


Q ss_pred             C-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        256 S-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       256 ~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      + ++.+|++++++++++++++|+   ++||+|...++++|.++|++||+++|+|++|+.+.. +.   +.   +.  ...
T Consensus       106 ~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~-~~---~~---~~--~~~  173 (367)
T 3nyt_A          106 PRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGAS-YK---GK---RS--CNL  173 (367)
T ss_dssp             TTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCE-ET---TE---ET--TSS
T ss_pred             CccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCe-EC---Ce---ec--cCC
Confidence            4 488999999999998998887   788999999999999999999999999999975432 11   11   11  111


Q ss_pred             CccEEEec--CCCCCCccCC-cEEEEEeCCcccc
Q psy10210        335 GVTSISVD--THKYGFTPKG-SSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s--~hK~~~~p~g-~g~il~~~~~~~~  365 (435)
                      + |++++|  .||++ ++.| .|+++.+++++.+
T Consensus       174 ~-di~~~Sf~~~K~l-~~~g~gg~~~~~~~~l~~  205 (367)
T 3nyt_A          174 S-TVACTSFFPSAPL-GCYGDGGAIFTNDDELAT  205 (367)
T ss_dssp             S-SEEEEECCTTSSS-CCSSCCEEEEESCHHHHH
T ss_pred             C-CEEEEECCCCCcC-CCcCceeEEEeCCHHHHH
Confidence            2 777777  58995 5533 5666666666543

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.86  E-value=1.1e-20  Score=187.95  Aligned_cols=250  Identities=12%  Similarity=0.043  Sum_probs=172.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+..+...... .....+......++++.+++++|.+  +++ ++++||+++..+++++.++++.     
T Consensus        61 ~~~v~~a~~~~~~~~~~~~~~-~~~~~g~~~~~~~l~~~la~~~g~~--~~i-~~~sGs~a~~~~~~~~~~~gd~-----  131 (401)
T 1fc4_A           61 HPDLIAAAKAGMDSHGFGMAS-VRFICGTQDSHKELEQKLAAFLGME--DAI-LYSSCFDANGGLFETLLGAEDA-----  131 (401)
T ss_dssp             CHHHHHHHHHHHHHHCSCCCS-CHHHHCCBHHHHHHHHHHHHHHTCS--EEE-EESCHHHHHHTTHHHHCCTTCE-----
T ss_pred             CHHHHHHHHHHHHHhCCCCCC-CCcccCCcHHHHHHHHHHHHHhCCC--cEE-EeCChHHHHHHHHHHHcCCCCE-----
Confidence            788999998888764321110 0111112456678888999999876  344 5556688999999998766655     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                         |+++.|+|.++...++..|++++.+|.     .|++++++++++      ++++|++++|+||||.+.++++|.++|
T Consensus       132 ---v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~  203 (401)
T 1fc4_A          132 ---IISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLA  203 (401)
T ss_dssp             ---EEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHH
T ss_pred             ---EEEcchhHHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHH
Confidence               999999999999999999999988873     478899988875      789999999999999999999999999


Q ss_pred             HHcCCcEEEecccc-chhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210        299 EKYGIPVHVDCCLG-GFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG  376 (435)
Q Consensus       299 ~~~~~~livD~~~~-~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g  376 (435)
                      ++||+++|+|++|+ ++...    .|.+... ++.. +++|+++.|+||++.++.| |+++. ++++.+........|. 
T Consensus       204 ~~~~~~li~De~~~~g~~~~----~g~~~~~~~~~~-~~~di~~~s~sK~~~~~~g-G~~~~-~~~~~~~l~~~~~~~~-  275 (401)
T 1fc4_A          204 DKYDALVMVDDSHAVGFVGE----NGRGSHEYCDVM-GRVDIITGTLGKALGGASG-GYTAA-RKEVVEWLRQRSRPYL-  275 (401)
T ss_dssp             HHTTEEEEEECTTTTTTSST----TSCCHHHHTTCT-TCCSEEEEESSSTTCSSSC-EEEEE-CHHHHHHHHHHCHHHH-
T ss_pred             HHcCCEEEEECcccccccCC----CCCccHHHcCCC-cCCcEEEecchhhccCCCC-EEEEc-CHHHHHHHHHhCcCce-
Confidence            99999999999996 65421    0111000 2322 3679999999999646666 88665 4555443211111110 


Q ss_pred             CCCCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        377 GNYGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       377 g~~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                             ..++.+....+++.++++.+. .+.+.+++++..+.+.+.++++
T Consensus       276 -------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~  319 (401)
T 1fc4_A          276 -------FSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA  319 (401)
T ss_dssp             -------HSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -------eCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence                   012233334445555666553 2566777777777777777765

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.86  E-value=1.4e-20  Score=186.23  Aligned_cols=250  Identities=12%  Similarity=0.010  Sum_probs=168.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .++++++++.+.+......++.... ..+..+...++++.+++++|.+   +.+++++||+++.++++++.++++.    
T Consensus        54 ~~~~v~~a~~~~~~~~~~~~~~~~~-~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGt~a~~~~~~~~~~~gd~----  125 (384)
T 1bs0_A           54 HHPQIIRAWQQGAEQFGIGSGGSGH-VSGYSVVHQALEEELAEWLGYS---RALLFISGFAANQAVIAAMMAKEDR----  125 (384)
T ss_dssp             GCHHHHHHHHHHHHHHCSCCCSBTT-TTCCCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHCCTTCE----
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCc-ccCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHHHHHhCCCCcE----
Confidence            3678899998888764322111100 0123355677888888888874   3455555699999999988666555    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcC---ceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGN---TVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                          |+++.|+|.++..+++..|++++.+|.     .|+++++++++++   +++|++++|+||||.+.++++|.++|++
T Consensus       126 ----v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~  196 (384)
T 1bs0_A          126 ----IAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQ  196 (384)
T ss_dssp             ----EEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred             ----EEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence                999999999999999999999999884     4789999998763   7899999999999999999999999999


Q ss_pred             cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210        301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG  380 (435)
Q Consensus       301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~  380 (435)
                      ||+++|+|++|+.+.+.   ..+...  .+....+.|+++.|+||+ ++|.| |+++. ++++.+........|..    
T Consensus       197 ~~~~li~De~~~~~~~~---~~~~~~--~~~~~~~~di~~~s~sK~-~~~~G-G~~~~-~~~~~~~l~~~~~~~~~----  264 (384)
T 1bs0_A          197 HNGWLMVDDAHGTGVIG---EQGRGS--CWLQKVKPELLVVTFGKG-FGVSG-AAVLC-SSTVADYLLQFARHLIY----  264 (384)
T ss_dssp             TTCEEEEECTTTTTTSS---GGGCCH--HHHTTCCCSEEEEESSST-TSSCC-EEEEE-CHHHHHHHHHHCHHHHS----
T ss_pred             cCcEEEEECCcccceec---CCCCch--HHhcCCCCcEEEeeccch-hhccC-cEEEe-CHHHHHHHHHhchhhhc----
Confidence            99999999999765431   011110  011113578999999999 46777 88665 45554332111111211    


Q ss_pred             CCccccCCCchHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        381 SPSVSGSRSGGIIATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       381 ~~~~~gsr~~~~ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                          ..+.+....+++.++++.+.   .+.+.++.++..+.+.+.++++
T Consensus       265 ----~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  309 (384)
T 1bs0_A          265 ----STSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL  309 (384)
T ss_dssp             ----SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ----CCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc
Confidence                01223333345556666553   2345555666666666655554

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.86  E-value=4.5e-20  Score=182.84  Aligned_cols=161  Identities=19%  Similarity=0.258  Sum_probs=126.1

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-  256 (435)
                      ++++.+++++|.+  .++++|+| |+|+.++++++ .++++.        |++++++|+++..+++..|++++.+|+++ 
T Consensus        42 ~l~~~la~~~~~~--~~i~~~sG-t~al~~~l~~l~~~~gd~--------Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~  110 (388)
T 1b9h_A           42 SFEREFAAHHGAA--HALAVTNG-THALELALQVMGVGPGTE--------VIVPAFTFISSSQAAQRLGAVTVPVDVDAA  110 (388)
T ss_dssp             HHHHHHHHHTTCS--EEEEESCH-HHHHHHHHHHTTCCTTCE--------EEEESSSCTHHHHHHHHTTCEEEEECBCTT
T ss_pred             HHHHHHHHHhCCC--eEEEeCCH-HHHHHHHHHHcCCCCcCE--------EEECCCccHHHHHHHHHcCCEEEEEecCCC
Confidence            3445566666654  35666655 99999999998 555544        99999999999999999999999999984 


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG-  335 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g-  335 (435)
                      ++.+|++++++++++++++|+   |+||+|.+.++++|.++|++||+++|+|++|+.+...    .|.     ++...+ 
T Consensus       111 ~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~----~~~-----~~~~~~~  178 (388)
T 1b9h_A          111 TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARW----QGK-----RVGELDS  178 (388)
T ss_dssp             TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEE----TTE-----EGGGSSS
T ss_pred             cCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCcc----CCe-----ecccccc
Confidence            588999999999988888877   8999999999999999999999999999999864331    011     111123 


Q ss_pred             ccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        336 VTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       336 vd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                      +++.++|.||++.++ ..|+++.+++.+
T Consensus       179 i~~~S~s~~K~l~g~-~~G~~~~~~~~~  205 (388)
T 1b9h_A          179 IATFSFQNGKLMTAG-EGGAVVFPDGET  205 (388)
T ss_dssp             CEEEECCTTSSSCSS-SCEEEEECTTCH
T ss_pred             eEEEEccCCCcccCC-CeEEEEECCHHH
Confidence            788888899996555 458877776545

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.85  E-value=3e-21  Score=194.03  Aligned_cols=190  Identities=11%  Similarity=0.014  Sum_probs=140.8

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHH--HHHHHHH
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESI--MMACKAY  213 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai--~~a~~a~  213 (435)
                      ...|....|.+++++++++++.                                +++ +++++|+|+++++  .++++++
T Consensus        71 ~~~Y~~~~g~~~lr~~ia~~~~--------------------------------~~~-~~i~~t~G~~~al~~~~~~~~l  117 (427)
T 3ppl_A           71 VRNYGGLDGIVDIRQIWADLLG--------------------------------VPV-EQVLAGDASSLNIMFDVISWSY  117 (427)
T ss_dssp             TTSSCCSSCCHHHHHHHHHHHT--------------------------------SCG-GGEEECSSCHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCcHHHHHHHHHHhC--------------------------------CCc-ceEEEeCCcHHHHHHHHHHHHH
Confidence            4456666678888888887762                                233 3899999999999  5888888


Q ss_pred             HH--Hhhhh--cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-cCceEEEEe-CCCCCccc
Q psy10210        214 RD--YAREE--KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGS-MPNFPYGT  287 (435)
Q Consensus       214 ~~--~~~~~--~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~-~p~nptG~  287 (435)
                      .+  +++..  ...++++|++++|+|+++...++..|++++.+|+++++ +|+++++++++ +++++|+++ ++|||||.
T Consensus       118 ~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~  196 (427)
T 3ppl_A          118 IFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGF  196 (427)
T ss_dssp             HHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCC
T ss_pred             hccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCc
Confidence            76  51000  00012349999999999999999999999999998766 99999999995 678888866 89999999


Q ss_pred             ccC---HHHHHHHH-HHcCCcEEEeccccchhhhcccccCCCCCCCCC-------CCCCccEEEecCCCCCCccCCcEEE
Q psy10210        288 MDD---IGAIAKLG-EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-------SLPGVTSISVDTHKYGFTPKGSSVV  356 (435)
Q Consensus       288 ~~~---i~~i~~la-~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-------~~~gvd~~~~s~hK~~~~p~g~g~i  356 (435)
                      +-+   +++|.++| ++||+++|+|++|+++.+.     +.+.++.++       ...+.+++..|++|++.++.++|++
T Consensus       197 ~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~  271 (427)
T 3ppl_A          197 TVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLT-----DEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFF  271 (427)
T ss_dssp             CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSS-----SCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEE
T ss_pred             cCCHHHHHHHHHHHhhcCCCEEEEECCCcccccC-----CCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEE
Confidence            955   45899999 9999999999999876441     111112221       1346788889999996556788985


Q ss_pred             EEeCCcccc
Q psy10210        357 LYRDLKYKH  365 (435)
Q Consensus       357 l~~~~~~~~  365 (435)
                      +. ++++..
T Consensus       272 ~~-~~~l~~  279 (427)
T 3ppl_A          272 LT-SAENRK  279 (427)
T ss_dssp             EC-CHHHHH
T ss_pred             Ec-CHHHHH
Confidence            54 455443

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.85  E-value=1.5e-20  Score=187.24  Aligned_cols=160  Identities=16%  Similarity=0.186  Sum_probs=131.2

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEE
Q psy10210        174 CKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKV  249 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v  249 (435)
                      .....++++++++++|.+   +.+++++|++|+.++++++.++++.        |++++|+|+++...+    +..|+++
T Consensus        63 ~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~l~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~~~g~~~  131 (398)
T 2rfv_A           63 NPTTDALEKKLAVLERGE---AGLATASGISAITTTLLTLCQQGDH--------IVSASAIYGCTHAFLSHSMPKFGINV  131 (398)
T ss_dssp             CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSSCHHHHHHHHTHHHHTTCEE
T ss_pred             ChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEcCCCcccHHHHHHHHHHHcCCEE
Confidence            345566777888888765   4566667889999999998766655        999999999988776    7789999


Q ss_pred             EEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        250 KHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       250 ~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      +.+|.+     |++++++++++++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+...         .++
T Consensus       132 ~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~---------~~~  197 (398)
T 2rfv_A          132 RFVDAA-----KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQ---------QPL  197 (398)
T ss_dssp             EEECTT-----SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTC---------CGG
T ss_pred             EEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC---------Cch
Confidence            999874     899999999999999999999999999999999999999999999999999866431         122


Q ss_pred             CCCCCCccEEEecCCCCCCccCC--cEEEEEeCC
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDL  361 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~  361 (435)
                      +   .++|+++.|+||++.+|.+  .|+++.+++
T Consensus       198 ~---~~~di~~~s~sK~~~~~g~~~~G~~~~~~~  228 (398)
T 2rfv_A          198 Q---LGADIVVHSVTKYINGHGDVIGGIIVGKQE  228 (398)
T ss_dssp             G---GTCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred             h---hCCcEEEEeCcccccCCCCceEEEEEECHH
Confidence            2   3689999999999666654  488666543

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.85  E-value=5.6e-21  Score=190.03  Aligned_cols=170  Identities=13%  Similarity=0.072  Sum_probs=128.5

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT  259 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~  259 (435)
                      +++.+++++|.++ +++++|+|+++++.++++++.++++.        |++++|+|+++...++..|++++.+|.++++ 
T Consensus        79 l~~~la~~~g~~~-~~v~~~~g~~~al~~~~~~~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-  148 (397)
T 2zyj_A           79 LRAFVAEWIGVRP-EEVLITTGSQQALDLVGKVFLDEGSP--------VLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-  148 (397)
T ss_dssp             HHHHHHHHHTSCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHTTCCEEEEEEEETTE-
T ss_pred             HHHHHHHHhCCCh-hhEEEeccHHHHHHHHHHHhCCCCCE--------EEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-
Confidence            3334444445444 38999999999999999998766655        9999999999999999999999999987655 


Q ss_pred             ccHHHHHHHhhc-CceEE-EEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCC
Q psy10210        260 VDLAALQSAITG-NTVML-VGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSL  333 (435)
Q Consensus       260 ~d~~~l~~~i~~-~~~~v-~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~  333 (435)
                      +|++++++++++ ++++| ++++|+||||.+-   ++++|.++|++||+++|+|++|+++.+.     |....++ .+..
T Consensus       149 ~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~~~~~~~  223 (397)
T 2zyj_A          149 PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG-----EARLPSLFELAR  223 (397)
T ss_dssp             ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS-----SCCCCCHHHHHH
T ss_pred             CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC-----CCCCCchhhhCc
Confidence            899999999986 78887 5789999999984   4669999999999999999999987541     1111111 1111


Q ss_pred             C---CccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        334 P---GVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~---gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      .   +.++++.|+||++.++.++|+++.+ +++.+
T Consensus       224 ~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~  257 (397)
T 2zyj_A          224 EAGYPGVIYLGSFSKVLSPGLRVAFAVAH-PEALQ  257 (397)
T ss_dssp             HHTCCCEEEEEESTTTTCGGGCCEEEECC-HHHHH
T ss_pred             ccCCCeEEEEecccccccccceeEEEecC-HHHHH
Confidence            1   2347788999995523567996655 55443

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.85  E-value=5.2e-20  Score=178.52  Aligned_cols=163  Identities=13%  Similarity=0.080  Sum_probs=129.2

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++++|.+++ ++++|+|+++++.+++.++  +++.        |++++|+|+++...++..|++++.+|+++++
T Consensus        55 ~lr~~la~~~~~~~~-~i~~t~G~~~~l~~~~~~~--~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~  123 (337)
T 3p1t_A           55 RVMRKLAEHFSCPED-NLMLVRGIDECFDRISAEF--SSMR--------FVTAWPGFDGYRARIAVSGLRHFEIGLTDDL  123 (337)
T ss_dssp             HHHHHHHHHHTSCGG-GEEEESHHHHHHHHHHHHS--TTSE--------EEEESSSCSHHHHHHTTSCCEEEEECBCTTS
T ss_pred             HHHHHHHHHhCcCHH-HEEEeCCHHHHHHHHHHhc--CCCe--------EEEeCCCcHHHHHHHHHcCCEEEEecCCCCC
Confidence            444555666666554 8999999999999999987  5555        9999999999999999999999999998888


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccE
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTS  338 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~  338 (435)
                      .+|+++++++  .+++++++++|+||||.+.+++++.++|+++++ +++|++|++|...     +    +......+.++
T Consensus       124 ~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~-----~----~~~~~~~~~~i  191 (337)
T 3p1t_A          124 LLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSF-----R----ARGLAYGENEL  191 (337)
T ss_dssp             SBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSC-----S----SSCCCCBTTEE
T ss_pred             CCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccc-----c----ccccccCCCEE
Confidence            8999999876  578999999999999999999999999999997 6679999875431     1    11122235678


Q ss_pred             EEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        339 ISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       339 ~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ++.|++|++. .+.++|+++. ++++.+
T Consensus       192 ~~~S~sK~~g~~G~r~G~~~~-~~~~~~  218 (337)
T 3p1t_A          192 VFRSFSKSYGLAGLRLGALFG-PSELIA  218 (337)
T ss_dssp             EEEESSSTTCCTTTCCEEEEC-CHHHHH
T ss_pred             EEeeCchhccCcchheEEEEe-CHHHHH
Confidence            8899999853 3456788554 445443

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.85  E-value=1.2e-20  Score=185.18  Aligned_cols=226  Identities=13%  Similarity=0.045  Sum_probs=150.0

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCc-eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETC-GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFG  246 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~-~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g  246 (435)
                      .+...++..++++.+++++|.+++.+ +++|+|||+++.+++.++.++++.        |+++++.|++  +...++..|
T Consensus        44 ~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~--------vl~~~~~~~~~~~~~~~~~~g  115 (362)
T 2c0r_A           44 GAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQT--------ANYVMTGSWASKALKEAKLIG  115 (362)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCE--------EEEEECSHHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCe--------EEEEecCcHhHHHHHHHHHhC
Confidence            45556677788999999999865424 578899999999999998776665        8888777665  346677789


Q ss_pred             CEEEEEecCC--Cc--cccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210        247 MKVKHIRLTS--SY--TVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA  321 (435)
Q Consensus       247 ~~v~~vp~~~--~~--~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~  321 (435)
                       +++.+|++.  ++  .+|.++++  ++++|++|++++++||||.+ .++++|      ||+++|+|++|+.+..     
T Consensus       116 -~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~-----  181 (362)
T 2c0r_A          116 -DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSR-----  181 (362)
T ss_dssp             -CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSS-----
T ss_pred             -CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCC-----
Confidence             999999862  22  35666654  67789999999999999995 788877      8999999999975432     


Q ss_pred             cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC-CCC-CCCccccCCCchHHHHHHHH
Q psy10210        322 AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG-GNY-GSPSVSGSRSGGIIATCWAA  399 (435)
Q Consensus       322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g-g~~-~~~~~~gsr~~~~ia~~~a~  399 (435)
                            ++++..  .|+++.|+||++ +|.|+|+++.++ ++.+......+.+.. +.. ......++.+...++++.++
T Consensus       182 ------~~~~~~--~d~~~~s~~K~~-g~~G~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~a  251 (362)
T 2c0r_A          182 ------PFDLNQ--FGLVYAGAQKNL-GPSGVTVVIVRE-DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEV  251 (362)
T ss_dssp             ------CCCGGG--CSEEEEETTTTT-CCSSCEEEEEEG-GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHH
T ss_pred             ------ccchhH--CcEEEEeccccc-cCcCcEEEEEcH-HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHH
Confidence                  334332  489999999995 789999977765 443321111110000 000 00011234444455566667


Q ss_pred             HHHhcH----HHHHHHHHHHHHHHHHHHHhcC
Q psy10210        400 MMYFGF----EAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       400 l~~~g~----~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++.+..    +...++.++.++.+.+.+++++
T Consensus       252 l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  283 (362)
T 2c0r_A          252 LKWIEERGGLEGVQQANRKKASLIYDAIDQSG  283 (362)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            765533    3444444555555555555543

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.85  E-value=3.6e-22  Score=197.62  Aligned_cols=231  Identities=11%  Similarity=-0.052  Sum_probs=154.9

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEE-cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcC
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCM-TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFG  246 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~-t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g  246 (435)
                      .+.+.++..++++.+++++|++++.++++ |+|||+++.+++..+..++++        +++....+.+  +...++..|
T Consensus        67 ~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~--------v~~~~~~~~~~~~~~~a~~~G  138 (386)
T 3qm2_A           67 GKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTT--------ADYVDAGYWAASAIKEAKKYC  138 (386)
T ss_dssp             ------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCE--------EEEEESSHHHHHHHHHHTTTS
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCe--------EEEEeCCHHHHHHHHHHHHhC
Confidence            34556777889999999999965457888 699999999999988655554        6555554544  344566678


Q ss_pred             CEEEEEecC--CCcc-ccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        247 MKVKHIRLT--SSYT-VDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       247 ~~v~~vp~~--~~~~-~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                       ++..+|++  ++|. +++++++++++++|++|.+++..|.+|++ .|+++|.     +|+++|+|++++.+        
T Consensus       139 -~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g--------  204 (386)
T 3qm2_A          139 -APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTIL--------  204 (386)
T ss_dssp             -EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTT--------
T ss_pred             -CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccC--------
Confidence             99999987  5564 78888888899999999999999999996 9999885     79999999998643        


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC--CCCCCCCccccCCCchHHHHHHHHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP--GGNYGSPSVSGSRSGGIIATCWAAM  400 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~--gg~~~~~~~~gsr~~~~ia~~~a~l  400 (435)
                         ..|+|+...+  ++++|+||++ ||+|+|+++++++.+. ......+.+.  ++........++.+...++++-+++
T Consensus       205 ---~~pidv~~~~--~~~~s~hK~l-GP~G~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al  277 (386)
T 3qm2_A          205 ---SAPLDVSRYG--VIYAGAQKNI-GPAGLTLVIVREDLLG-KAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVF  277 (386)
T ss_dssp             ---SSCCCGGGCS--EEEEETTTTT-CCTTEEEEEEEGGGCS-CCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHH
T ss_pred             ---CCCCCccccC--EEEEeccccc-CCCccEEEEECHHHHh-hhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHH
Confidence               3377877665  5779999996 8999999888865432 2111112110  0000011122455555566777777


Q ss_pred             HHhcHH-HHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        401 MYFGFE-AQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       401 ~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      +.+..+ |+.+..++..+..+.+.+.|.++
T Consensus       278 ~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~  307 (386)
T 3qm2_A          278 KWLKAQGGVAAMHKINQQKAELLYGVIDNS  307 (386)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHC
Confidence            776555 56655555555555555554444

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.85  E-value=5.7e-21  Score=191.28  Aligned_cols=216  Identities=14%  Similarity=0.053  Sum_probs=152.0

Q ss_pred             CccccCCC-----CCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210        101 LEYFLELP-----SQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK  175 (435)
Q Consensus       101 ~~~~~~~P-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  175 (435)
                      +.+..+.|     +. ..++.+.+.+.+...       .+...|....|.+++++++++++......             
T Consensus        41 i~l~~g~~~~~~~~~-~~~~~v~~a~~~~~~-------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~-------------   99 (418)
T 3rq1_A           41 VNGTLGAIHDEEGNL-VFLKTVKEEYLSLSD-------SEHVGYAPIAGIPDFLCAAEKECFGNFRP-------------   99 (418)
T ss_dssp             EECCSSCCBCTTSCB-CCCHHHHHHHHTCCH-------HHHHSCCCTTCCHHHHHHHHHHHHGGGCC-------------
T ss_pred             EECCCCcccCCCCCc-cccHHHHHHHHHhcc-------cccCCCCCCCChHHHHHHHHHHHhcccCc-------------
Confidence            44455554     32 445566666554322       12345566678899999999888653211             


Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                                     +..+++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|++
T Consensus       100 ---------------~~~~~i~~t~g~~~al~~~~~~l~~~gd~--------Vl~~~p~~~~~~~~~~~~g~~~~~v~~~  156 (418)
T 3rq1_A          100 ---------------EGHIRSIATAGGTGGIHHLIHNYTEPGDE--------VLTADWYWGAYRVICSDTGRTLVTYSLF  156 (418)
T ss_dssp             ---------------SSEEEEEEESHHHHHHHHHHHHHSCTTCE--------EEEESSCCTHHHHHHHHTTCEEEEECSB
T ss_pred             ---------------cccccEEECCchHHHHHHHHHHhcCCCCE--------EEECCCCchhHHHHHHHcCCEEEEEeee
Confidence                           11237999999999999999999877776        9999999999999999999999999985


Q ss_pred             -CCccccHHHHHHHhhc----Cce-EEEEeCC-CCCcccccC---HHHHHHHHH------HcCCcEEEeccccchhhhcc
Q psy10210        256 -SSYTVDLAALQSAITG----NTV-MLVGSMP-NFPYGTMDD---IGAIAKLGE------KYGIPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~----~~~-~v~~~~p-~nptG~~~~---i~~i~~la~------~~~~~livD~~~~~~~~~~~  319 (435)
                       +++.+|++++++++++    +++ ++++++| +||||.+-+   +++|+++|+      +||+++|+|++|.++...  
T Consensus       157 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~--  234 (418)
T 3rq1_A          157 DEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGE--  234 (418)
T ss_dssp             CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSC--
T ss_pred             CCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCC--
Confidence             5678999999999975    665 8889999 999999944   566667776      899999999999887641  


Q ss_pred             cccCCCCCCC--CCCCCCc---cEEEecCCCCCC-ccCCcEEEEE--eCCcccc
Q psy10210        320 SAAGYPLPPF--DFSLPGV---TSISVDTHKYGF-TPKGSSVVLY--RDLKYKH  365 (435)
Q Consensus       320 ~~~g~~~~~~--d~~~~gv---d~~~~s~hK~~~-~p~g~g~il~--~~~~~~~  365 (435)
                      ..   ...++  ......-   .+++.|++|... .+.++|+++.  +++++.+
T Consensus       235 ~~---~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~  285 (418)
T 3rq1_A          235 KD---EVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIAD  285 (418)
T ss_dssp             HH---HHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHH
T ss_pred             hH---HHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHH
Confidence            00   00011  0111111   366779999743 3356788665  2555544

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.85  E-value=1.7e-20  Score=187.41  Aligned_cols=225  Identities=14%  Similarity=0.092  Sum_probs=146.9

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHc--
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYF--  245 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~--  245 (435)
                      +...+++..+++++++++|.++. ++++++| |+|+.++++++.++++.        |++++|+|+++..   .....  
T Consensus        67 ~~~~~~~~~~~~~la~~~g~~~~-~i~~~sG-t~a~~~~~~~~~~~gd~--------vl~~~~~~~~~~~~~~~~~~~g~  136 (417)
T 3n0l_A           67 EFVDEIETLAIERCKKLFNCKFA-NVQPNSG-SQANQGVYAALINPGDK--------ILGMDLSHGGHLTHGAKVSSSGK  136 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSEE-ECCCSSH-HHHHHHHHHHHSCTTCE--------EEEECC----------------C
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCc-ceEeccH-HHHHHHHHHHhcCCCCE--------EEecccccccccchhhhhhhhcc
Confidence            45567777788899999988653 5767666 89999999999877776        9999999988654   33333  


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +..++.+++++++.+|+++++++++ +++++|++++++|  |.+.++++|.++|++||+++|+|++++..... .   +.
T Consensus       137 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~---~~  210 (417)
T 3n0l_A          137 MYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVV-A---GE  210 (417)
T ss_dssp             CSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHH-T---TS
T ss_pred             eeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhh-c---cc
Confidence            4456667777778899999999998 6899999888886  88889999999999999999999997544331 1   11


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                      .  +..+  .++|+++.|+||++.||.| |+++.+++++.+........+         ..++.....++++.+++....
T Consensus       211 ~--~~~~--~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~aa~~~a~~~~~  276 (417)
T 3n0l_A          211 H--PSPF--PYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFPG---------IQGGPLMHVIAAKAVGFKFNL  276 (417)
T ss_dssp             S--CCCT--TTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTTT---------TCSSCCHHHHHHHHHHHHHHT
T ss_pred             C--CCcc--ccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCCc---------ccCCcHHHHHHHHHHHHHHHH
Confidence            1  1111  2579999999998766664 887766566544321111111         112333334455555665543


Q ss_pred             HH---HHHHHHHHHHHHHHHHHHh
Q psy10210        405 FE---AQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       405 ~~---g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+   .+.++.++..+.+.+.+++
T Consensus       277 ~~~~~~~~~~~~~~~~~l~~~L~~  300 (417)
T 3n0l_A          277 SDEWKVYAKQVRTNAQVLANVLMD  300 (417)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHh
Confidence            33   4444555555555555554

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.85  E-value=2.5e-20  Score=186.74  Aligned_cols=165  Identities=17%  Similarity=0.224  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      ..++++.+++++|.+   +.+++++||+|+.++++++ .++++.        |+++.++|+++..+++..|++++.+|++
T Consensus        44 ~~~l~~~la~~~g~~---~~i~~~~gt~al~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~~~~~  112 (418)
T 2c81_A           44 ERKFAKAFADFNGVP---YCVPTTSGSTALMLALEALGIGEGDE--------VIVPSLTWIATATAVLNVNALPVFVDVE  112 (418)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHTTCCTTCE--------EEEESSSCTHHHHHHHHTTCEEEEECBC
T ss_pred             HHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHcCCCCcCE--------EEECCCccHhHHHHHHHcCCEEEEEecC
Confidence            334445566666664   4677888899999999998 555554        9999999999999999999999999998


Q ss_pred             C-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        256 S-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       256 ~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      + ++.+|++++++++++++++|+++   ||+|...++++|.++|++||+++|+|++|+.+.. +.   +.   ++.. ..
T Consensus       113 ~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-~~---~~---~~~~-~~  181 (418)
T 2c81_A          113 ADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSV-WN---NQ---RAGT-IG  181 (418)
T ss_dssp             TTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ET---TE---ETTS-SS
T ss_pred             CCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccccCc-cC---CE---eccc-cc
Confidence            4 78899999999998889988864   5799999999999999999999999999988753 11   10   1110 11


Q ss_pred             CccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      .+++.+++.||++ ++...|+++.+++++.
T Consensus       182 ~~~~~s~s~~K~~-~~g~~g~~~~~~~~l~  210 (418)
T 2c81_A          182 DIGAFSCQQGKVL-TAGEGGIIVTKNPRLF  210 (418)
T ss_dssp             SEEEEECCTTSSS-CSSSCEEEEESCHHHH
T ss_pred             ceEEEeccCCccc-CCCCeEEEEECCHHHH
Confidence            2667777779995 4435577665555543

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.85  E-value=3.6e-20  Score=185.03  Aligned_cols=156  Identities=16%  Similarity=0.126  Sum_probs=128.3

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+   ++++++||++|+.++++++.++++.        |++++|.|+++..    .++..|++++.+|.
T Consensus        66 ~l~~~ia~~~g~~---~~i~~~~g~~ai~~~~~~l~~~gd~--------Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~  134 (404)
T 1e5e_A           66 NLEGKIAFLEKTE---ACVATSSGMGAIAATVLTILKAGDH--------LISDECLYGCTHALFEHALTKFGIQVDFINT  134 (404)
T ss_dssp             HHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHhCCC---cEEEeCChHHHHHHHHHHHhCCCCE--------EEEeCCCchhHHHHHHHHHHHcCCEEEEECC
Confidence            3444555566553   5778888899999999998766665        9999999999888    78889999999987


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH-cCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK-YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~-~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      +     |++++++++++++++|++++|+||||.+.++++|.++|++ ||+++|+|++|+.+...         .+++   
T Consensus       135 ~-----d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~---------~~~~---  197 (404)
T 1e5e_A          135 A-----IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMIT---------NPVD---  197 (404)
T ss_dssp             T-----STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTC---------CGGG---
T ss_pred             C-----CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhC---------Cccc---
Confidence            5     7899999999999999999999999999999999999999 99999999999877541         1232   


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLK  362 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~  362 (435)
                      .++|+++.|+||++.+|.+  .|+++.+++.
T Consensus       198 ~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~  228 (404)
T 1e5e_A          198 FGVDVVVHSATKYINGHTDVVAGLICGKADL  228 (404)
T ss_dssp             GTCSEEEEETTTTTTCSSCCCCEEEEECHHH
T ss_pred             cCCEEEEEcCccccCCCCCCeEEEEEECHHH
Confidence            3789999999998666654  4886665543

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.85  E-value=1.1e-19  Score=180.87  Aligned_cols=166  Identities=14%  Similarity=0.150  Sum_probs=135.1

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ...++++.+++++|.   +++++|+|||+|+.++++++ .++++.        |++++++|+++..+++..|++++.+|+
T Consensus        33 ~~~~l~~~la~~~~~---~~v~~~~ggt~al~~~~~~l~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~  101 (394)
T 1o69_A           33 FVNRFEQSVKDYSKS---ENALALNSATAALHLALRVAGVKQDDI--------VLASSFTFIASVAPICYLKAKPVFIDC  101 (394)
T ss_dssp             HHHHHHHHHHHHHCC---SEEEEESCHHHHHHHHHHHTTCCTTCE--------EEEESSSCGGGTHHHHHTTCEEEEECB
T ss_pred             HHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHcCCCCCCE--------EEECCCccHHHHHHHHHcCCEEEEEEe
Confidence            344566677777776   37999999999999999998 555554        999999999999999999999999999


Q ss_pred             CCCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEecccc-chhhhcccccCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG-GFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~-~~~~~~~~~~g~~~~~~d  330 (435)
                      ++++.+|++++++++++   ++++|++++   |+|...++++|.++|++||+++|+|++|+ ++...     +.....  
T Consensus       102 ~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-----~~~~~~--  171 (394)
T 1o69_A          102 DETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYK-----NKALGT--  171 (394)
T ss_dssp             CTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET-----TEETTS--
T ss_pred             CCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeC-----Cccccc--
Confidence            88888999999999987   789999886   79999999999999999999999999998 43321     110001  


Q ss_pred             CCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        331 FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                        ..++|+++++.||. ++|.++|+++.+++++.+
T Consensus       172 --~~~~~~~s~s~~K~-l~~~~~G~~~~~~~~l~~  203 (394)
T 1o69_A          172 --FGEFGVYSYNGNKI-ITTSGGGMLIGKNKEKIE  203 (394)
T ss_dssp             --SSSEEEEECCTTSS-SCCSSCEEEEESCHHHHH
T ss_pred             --ccCcEEEEEeCCcc-CCCCCceEEEECCHHHHH
Confidence              12489999999997 577788997776666543

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.85  E-value=3.2e-20  Score=184.64  Aligned_cols=160  Identities=21%  Similarity=0.231  Sum_probs=131.1

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHI  252 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~v  252 (435)
                      ..++++.+++++|.+   ++++++||++|+.++++++..+++.        |+++++.|+++...+    +..|++++.+
T Consensus        68 ~~~l~~~la~~~g~~---~~~~~~sGt~A~~~al~~~~~~gd~--------Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v  136 (392)
T 3qhx_A           68 RTALEAALAAVEDAA---FGRAFSSGMAAADCALRAMLRPGDH--------VVIPDDAYGGTFRLIDKVFTGWNVEYTPV  136 (392)
T ss_dssp             HHHHHHHHHHHTTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             HHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence            455667788888764   5788999999999999988766655        999999999877666    6679999999


Q ss_pred             ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      |++     |++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+..         ..+.   
T Consensus       137 ~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~---------~~~~---  199 (392)
T 3qhx_A          137 ALA-----DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL---------QQPL---  199 (392)
T ss_dssp             CTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT---------CCGG---
T ss_pred             CCC-----CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc---------CChH---
Confidence            864     89999999999999999999999999999999999999999999999999975422         1122   


Q ss_pred             CCCccEEEecCCCCCCccCC---cEEEEEeCCcccc
Q psy10210        333 LPGVTSISVDTHKYGFTPKG---SSVVLYRDLKYKH  365 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~g---~g~il~~~~~~~~  365 (435)
                      ..++|+++.|+||++ ++.|   .|+++.+++++.+
T Consensus       200 ~~~~di~~~S~sK~l-g~~g~~~~G~v~~~~~~~~~  234 (392)
T 3qhx_A          200 SLGADVVLHSTTKYI-GGHSDVVGGALVTNDEELDQ  234 (392)
T ss_dssp             GGTCSEEEEETTTTT-TCSSCCCCEEEEESCHHHHH
T ss_pred             HhCCcEEEEcCcccc-CCCCCceEEEEEECcHHHHH
Confidence            347899999999995 4443   6886666555543

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.85  E-value=2.5e-20  Score=187.79  Aligned_cols=221  Identities=14%  Similarity=0.066  Sum_probs=155.3

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCC--------CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLARGHYDWKH--------GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK  175 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  175 (435)
                      ..++-.+....+.+.+.+.+....   .+..        ....|....|.+++++.+++++....... .          
T Consensus        42 ~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~-~----------  107 (435)
T 3piu_A           42 QMGLAENQLCFDLLESWLAKNPEA---AAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNK-V----------  107 (435)
T ss_dssp             ECSSCCCCSSHHHHHHHHHHCTTG---GGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTS-S----------
T ss_pred             EeccccccccHHHHHHHHHhCccc---cccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCC-C----------
Confidence            445555556666666655543221   1100        01345555567778888887776421110 0          


Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEec
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRL  254 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~  254 (435)
                                   ..++ +++++|+||++|+.+++++++++++.        |++++|+|+++...+. ..|++++.+|.
T Consensus       108 -------------~~~~-~~v~~~~gg~~a~~~~~~~l~~~gd~--------vl~~~p~~~~~~~~~~~~~g~~~~~~~~  165 (435)
T 3piu_A          108 -------------TFDP-NHLVLTAGATSANETFIFCLADPGEA--------VLIPTPYYPGFDRDLKWRTGVEIVPIHC  165 (435)
T ss_dssp             -------------CCCG-GGEEEEEHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHTTTTTCCEEEEEEC
T ss_pred             -------------CCCH-HHEEEcCChHHHHHHHHHHhcCCCCe--------EEECCCccccHHHHHHHhcCCEEEEeeC
Confidence                         0123 48999999999999999999877766        9999999999998888 78999999998


Q ss_pred             CC--CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        255 TS--SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       255 ~~--~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      ++  ++.+|++++++++++      ++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     +
T Consensus       166 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-----~  240 (435)
T 3piu_A          166 TSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS-----S  240 (435)
T ss_dssp             CGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS-----S
T ss_pred             CCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-----C
Confidence            74  456899999999976      88999999999999999   56799999999999999999999886542     1


Q ss_pred             CCCCCC-CC-CC---------CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        324 YPLPPF-DF-SL---------PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       324 ~~~~~~-d~-~~---------~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      ...... .+ ..         .+.++++.++||.++ ++.++|+++.+++.+..
T Consensus       241 ~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~  294 (435)
T 3piu_A          241 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVA  294 (435)
T ss_dssp             SCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHH
T ss_pred             CCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHH
Confidence            110111 00 01         223477889999853 34568997776665543

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.85  E-value=7.6e-21  Score=188.82  Aligned_cols=199  Identities=11%  Similarity=0.015  Sum_probs=145.7

Q ss_pred             HHHHHHHHH-HHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC
Q psy10210        115 LEILELVSN-YLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE  193 (435)
Q Consensus       115 ~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~  193 (435)
                      +.+.+.+.+ .+...      +..+|....|.+++++.+++.+.......                           -..
T Consensus        47 ~~v~~a~~~~~~~~~------~~~~y~~~~g~~~lr~~la~~~~~~~~~~---------------------------~~~   93 (397)
T 3fsl_A           47 QAVAEAEARLNAQPH------GASLYLPMEGLNCYRHAIAPLLFGADHPV---------------------------LKQ   93 (397)
T ss_dssp             HHHHHHHHHHHHSCC------CCCCCCCTTCCHHHHHHHHHHHHCTTCHH---------------------------HHT
T ss_pred             HHHHHHHHhhccCcc------ccccCCCCCchHHHHHHHHHHHhcCCccc---------------------------ccc
Confidence            677777777 65531      12344455677888888888775421100                           022


Q ss_pred             C--ceEEcCChHHHHHHHHH--HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec--CCCccccHHHHHH
Q psy10210        194 T--CGCMTSGGTESIMMACK--AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL--TSSYTVDLAALQS  267 (435)
Q Consensus       194 ~--~~~~t~ggteai~~a~~--a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~--~~~~~~d~~~l~~  267 (435)
                      +  ++++|+||++++.++++  ++.++++.        |++++|+|+++...++..|++++.+|+  ++++.+|++++++
T Consensus        94 ~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~  165 (397)
T 3fsl_A           94 QRVATIQTLGGSGALKVGADFLKRYFPESG--------VWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLA  165 (397)
T ss_dssp             TCEEEEEESHHHHHHHHHHHHHHHHCTTCC--------EEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHH
T ss_pred             cceEEEEcCCcHHHHHHHHHHHHhcCCCCe--------EEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHH
Confidence            4  78999999999999964  44555655        999999999999999999999999998  3578899999999


Q ss_pred             Hhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCccEEE
Q psy10210        268 AIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVTSIS  340 (435)
Q Consensus       268 ~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd~~~  340 (435)
                      +++   ++++++++++|+||||.+   +++++|+++|++||+++|+|++|+++..... .....  ...+ ...+.+++.
T Consensus       166 ~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~  242 (397)
T 3fsl_A          166 TLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGME-EDAYA--IRAIASAGLPALVS  242 (397)
T ss_dssp             HHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTT-GGGHH--HHHHHHTTCCEEEE
T ss_pred             HHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcc-cccHH--HHHHHhcCCCEEEE
Confidence            998   578999999999999999   6788999999999999999999998764200 00000  0011 123446777


Q ss_pred             ecCCCCCCcc--CCcEEEEE
Q psy10210        341 VDTHKYGFTP--KGSSVVLY  358 (435)
Q Consensus       341 ~s~hK~~~~p--~g~g~il~  358 (435)
                      .|++|.+ ++  .++|+++.
T Consensus       243 ~S~SK~~-~~~G~riG~~~~  261 (397)
T 3fsl_A          243 NSFSKIF-SLYGERVGGLSV  261 (397)
T ss_dssp             EECTTTT-TCGGGCCEEEEE
T ss_pred             ecccccc-cCcCCCeeEEEE
Confidence            8899984 54  45788765

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.85  E-value=3.2e-21  Score=188.89  Aligned_cols=230  Identities=13%  Similarity=0.046  Sum_probs=154.9

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCCh-HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGG-TESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK  248 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~gg-teai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~  248 (435)
                      .++..++..++++++++++|.++++++++|+|+ |+|+.+++.++..+++.     +++|+++.++|.+. ..++..| +
T Consensus        43 ~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~-----g~~vi~~~~~~~~~-~~~~~~g-~  115 (360)
T 1w23_A           43 SQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTI-----GNYVLTGSWSEKAL-KEAKLLG-E  115 (360)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCE-----EEEEECSHHHHHHH-HHHHTTS-E
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCc-----ccEEEecchhHHHH-HHHHHhC-C
Confidence            456667778888999999998644589999998 99999999988754321     23477777777764 3467779 9


Q ss_pred             EEEEecCC-CccccHHHHHH-HhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        249 VKHIRLTS-SYTVDLAALQS-AITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       249 v~~vp~~~-~~~~d~~~l~~-~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      ++.+|+++ ++.+|++++++ +++++|++|++++|+||||.+-+     +++++||+++|+|++|+.+..          
T Consensus       116 ~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~----------  180 (360)
T 1w23_A          116 THIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSR----------  180 (360)
T ss_dssp             EEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSS----------
T ss_pred             eEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCC----------
Confidence            99999974 66689999999 88889999999999999999844     233389999999999976533          


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC----CCccccCCCchHHHHHHHHHHH
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG----SPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~----~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                       +.++..  .|+++.|+||+ ++|.|+|+++.+++. .+...... .|... +.    .....++.+...++++.++++.
T Consensus       181 -~~~~~~--~di~~~s~sK~-~~~~G~G~~~~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~  253 (360)
T 1w23_A          181 -PLKVNQ--FGMIYAGAQKN-LGPSGVTVVIVKKDL-LNTKVEQV-PTMLQ-YATHIKSDSLYNTPPTFSIYMLRNVLDW  253 (360)
T ss_dssp             -CCCGGG--CSEEEEETTTT-TSCTTCEEEEEEHHH-HCSCCTTC-CGGGC-HHHHHHTTTCSSCCCHHHHHHHHHHHHH
T ss_pred             -CcCccc--CCEEEEEcccc-cCCCCcEEEEEcHHH-HhhcccCC-cchhh-hhhhhhccCCCCCCCHHHHHHHHHHHHH
Confidence             223322  38999999998 578899997777543 32211111 11000 00    0011133344444455566665


Q ss_pred             hcH----HHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        403 FGF----EAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       403 ~g~----~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      +..    +...++.++..+.+.+.++++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  283 (360)
T 1w23_A          254 IKDLGGAEAIAKQNEEKAKIIYDTIDESNG  283 (360)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHccC
Confidence            433    44455555666666666666553

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.85  E-value=1.5e-19  Score=181.49  Aligned_cols=160  Identities=17%  Similarity=0.196  Sum_probs=123.8

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-C
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-S  257 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~  257 (435)
                      ++++.+++++|.   +++++|+|||+|+.++++++. +++        +|++++++|+++..+++..|++++.+|+++ +
T Consensus        56 ~l~~~la~~~~~---~~v~~~~ggt~al~~~l~~l~-~gd--------~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~  123 (424)
T 2po3_A           56 EFEERVAGLAGV---RHAVATCNATAGLQLLAHAAG-LTG--------EVIMPSMTFAATPHALRWIGLTPVFADIDPDT  123 (424)
T ss_dssp             HHHHHHHHHHTS---SEEEEESCHHHHHHHHHHHHT-CCS--------EEEEESSSCTHHHHHHHHTTCEEEEECBCTTT
T ss_pred             HHHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHcC-CCC--------EEEECCCccHHHHHHHHHcCCEEEEEecCCCc
Confidence            344455555654   279999999999999999884 333        599999999999999999999999999984 7


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEecccc-chhhhcccccCCCCCCCCCCCCCc
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG-GFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~-~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      +.+|++++++++++++++|++++   |+|...++++|.++|++||+++|+|++|+ ++.+  .   +.   ++..   ..
T Consensus       124 ~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~--~---~~---~~~~---~~  189 (424)
T 2po3_A          124 GNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAV--D---GR---PAGS---LG  189 (424)
T ss_dssp             SSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE--T---TE---ETTS---SS
T ss_pred             CCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeE--C---Ce---eccc---cc
Confidence            88999999999988899998864   79999999999999999999999999998 4432  1   11   1110   12


Q ss_pred             cEEEecCC--CCCCccCCcEEEEEeCCcccc
Q psy10210        337 TSISVDTH--KYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~h--K~~~~p~g~g~il~~~~~~~~  365 (435)
                      |+++.|+|  |++ ++...|+++.+++++.+
T Consensus       190 di~~~S~sk~K~l-~~~~~G~~v~~~~~l~~  219 (424)
T 2po3_A          190 DAEVFSFHATKAV-NAFEGGAVVTDDADLAA  219 (424)
T ss_dssp             SEEEEECCTTSSS-CCSSCEEEEESCHHHHH
T ss_pred             CEEEEeCCCCCCc-cCCCCeEEEeCCHHHHH
Confidence            56666655  874 55566886666455543

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.85  E-value=2.4e-20  Score=187.44  Aligned_cols=159  Identities=14%  Similarity=0.110  Sum_probs=123.6

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH-HHcCCEEEEEecC--CCccccHHHHHHHhh
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA-NYFGMKVKHIRLT--SSYTVDLAALQSAIT  270 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~-~~~g~~v~~vp~~--~~~~~d~~~l~~~i~  270 (435)
                      +++++|+|+++++.+++++++++++.        |++++|+|+++...+ ...|++++.+|.+  +++.+|+++++++++
T Consensus       109 ~~i~~~~G~~~ai~~~~~~~~~~gd~--------Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~  180 (428)
T 1iay_A          109 ERVVMAGGATGANETIIFCLADPGDA--------FLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYE  180 (428)
T ss_dssp             TSCEEEEHHHHHHHHHHHHHCCTTCE--------EEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHH
T ss_pred             hhEEEccChHHHHHHHHHHhCCCCCe--------EEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHH
Confidence            48999999999999999999876665        999999999988755 4679999999987  345789999999986


Q ss_pred             c------CceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCC------C
Q psy10210        271 G------NTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSL------P  334 (435)
Q Consensus       271 ~------~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~------~  334 (435)
                      +      ++++|++++|+||||.+.+   +++|.++|++||+++|+|++|+++.+.     +....++ .+..      .
T Consensus       181 ~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-----~~~~~~~~~~~~~~~~~~~  255 (428)
T 1iay_A          181 NAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD-----TPQFVSIAEILDEQEMTYC  255 (428)
T ss_dssp             HHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS-----SSCCCCHHHHHTSGGGTTS
T ss_pred             HHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC-----CCCccCHHHhccccccccC
Confidence            4      6899999999999999976   999999999999999999999986441     1111111 1111      1


Q ss_pred             Ccc--EEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        335 GVT--SISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd--~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      +.|  +++.|+||++. ++..+|+++..++++.+
T Consensus       256 ~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~  289 (428)
T 1iay_A          256 NKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVN  289 (428)
T ss_dssp             CTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHH
T ss_pred             CCCcEEEEecchhhcCCCCceEEEEEeCCHHHHH
Confidence            245  77889999843 23456997776666544

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.85  E-value=1e-19  Score=181.20  Aligned_cols=185  Identities=16%  Similarity=0.108  Sum_probs=139.4

Q ss_pred             HhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCC
Q psy10210        146 QDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGIS  224 (435)
Q Consensus       146 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~  224 (435)
                      +++.+++.+.+....    +.+  .    ....++++.+++++|.+   ++++++||++|+.++++++ ..+++.     
T Consensus        44 ~~v~~a~~~~~~~~~----y~~--~----~~~~~l~~~la~~~~~~---~~v~~~~Gt~a~~~~l~~~~~~~gd~-----  105 (399)
T 2oga_A           44 AETDAAIARVLDSGR----YLL--G----PELEGFEAEFAAYCETD---HAVGVNSGMDALQLALRGLGIGPGDE-----  105 (399)
T ss_dssp             HHHHHHHHHHHHHTC----CSS--S----HHHHHHHHHHHHHTTSS---EEEEESCHHHHHHHHHHHTTCCTTCE-----
T ss_pred             HHHHHHHHHHHhcCC----CCC--c----hhHHHHHHHHHHHHCCC---eEEEecCHHHHHHHHHHHhCCCCcCE-----
Confidence            667777777665421    111  1    33456667788888764   5688888899999999988 555544     


Q ss_pred             CCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy10210        225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI  303 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~  303 (435)
                         |++++++|+++..+++..|++++.+|+++ ++.+|++++++++++++++|+   ++||+|.+.++++|.++|+++|+
T Consensus       106 ---vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~  179 (399)
T 2oga_A          106 ---VIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGL  179 (399)
T ss_dssp             ---EEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTC
T ss_pred             ---EEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCC
Confidence               99999999999999999999999999985 678999999999988888877   57889999999999999999999


Q ss_pred             cEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC--CCCCccC-CcEEEEEeCCcccc
Q psy10210        304 PVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH--KYGFTPK-GSSVVLYRDLKYKH  365 (435)
Q Consensus       304 ~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h--K~~~~p~-g~g~il~~~~~~~~  365 (435)
                      ++|+|++|+.+... .   +.   ++.   .-.|++++|+|  |++ ++. ..|+++.+++++.+
T Consensus       180 ~li~Dea~~~g~~~-~---~~---~~~---~~~di~~~S~~~sK~~-~~~G~~g~~~~~~~~~~~  233 (399)
T 2oga_A          180 HIVEDAAQAHGARY-R---GR---RIG---AGSSVAAFSFYPGKNL-GCFGDGGAVVTGDPELAE  233 (399)
T ss_dssp             EECEECTTCTTCEE-T---TE---ETT---CTTCEEEEECCTTSSS-CCSSCCEEEEESCHHHHH
T ss_pred             EEEEECcccccCcc-C---Ce---ecc---cccCEEEEeCCCCccC-CcCCceEEEEeCCHHHHH
Confidence            99999999865331 1   10   111   01478888884  985 553 45776666566543

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.85  E-value=1.6e-20  Score=187.59  Aligned_cols=251  Identities=11%  Similarity=0.024  Sum_probs=169.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.++.... ..+....+..+...++++++++++|.+.   .+++++|++++..+++++.++++.    
T Consensus        74 ~~p~v~~a~~~~l~~~~~~~-~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sGt~a~~~~l~~~~~~gd~----  145 (409)
T 3kki_A           74 NHPLIKARLAKSLLEEQQSL-FMSASFLQNDYDKPMIEKRLAKFTGFDE---CLLSQSGWNANVGLLQTICQPNTN----  145 (409)
T ss_dssp             TCHHHHHHHHHHHHSCCCCC-CSBGGGGCSTTTSCHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHCCTTCE----
T ss_pred             CCHHHHHHHHHHHHHcCCCC-CccccccCCcHHHHHHHHHHHHHhCCCe---EEEecchHHHHHHHHHHhcCCCCE----
Confidence            46788888888877632111 1111122233444567778888887753   455667789999999998877766    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG  302 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~  302 (435)
                          |++++++|+++..+++..|++++.++.     .|++++++++.+ ++++|++++++||||.+.++++|.++|++||
T Consensus       146 ----Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~  216 (409)
T 3kki_A          146 ----VYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFG  216 (409)
T ss_dssp             ----EEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHT
T ss_pred             ----EEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcC
Confidence                999999999999999999999988774     589999999985 5899999999999999999999999999999


Q ss_pred             CcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCC
Q psy10210        303 IPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGS  381 (435)
Q Consensus       303 ~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~  381 (435)
                      +++|+|++|+++.+..   .|.+.. .++. ..++|+++.|++|++ ++.| |++ +.++++.+........+.      
T Consensus       217 ~~li~De~~~~g~~g~---~g~~~~~~~~~-~~~~di~~~s~sK~~-~~~g-g~v-~~~~~~~~~~~~~~~~~~------  283 (409)
T 3kki_A          217 CALLVDESHSLGTHGP---NGAGLLAELGL-TREVHFMTASLAKTF-AYRA-GAI-WCNNEVNRCVPFISYPAI------  283 (409)
T ss_dssp             CEEEEECTTTTTTSSG---GGCCHHHHHTC-GGGCSEEEEESSSTT-CSSC-EEE-EESSSGGGTHHHHCHHHH------
T ss_pred             CEEEEECCccccccCC---CCCcchhhcCC-CCCCCEEEeecchhh-CCCc-eEE-EECHHHHHHHHHhCcCcc------
Confidence            9999999998755411   111100 0111 135789999999995 4433 664 455555443211111110      


Q ss_pred             CccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        382 PSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       382 ~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                        ..++.+...++++.++++.+.. +.+.++.++..+.+.+.++++
T Consensus       284 --~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~  327 (409)
T 3kki_A          284 --FSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL  327 (409)
T ss_dssp             --HSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --ccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence              1112233344566666666543 456666677777777666654

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.84  E-value=2.9e-20  Score=197.31  Aligned_cols=246  Identities=12%  Similarity=0.006  Sum_probs=166.2

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCEEEEEe
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMKVKHIR  253 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~v~~vp  253 (435)
                      ....++++.+|+++|.+.  .+++++|+++++..++.++..+++.        |+++.++|.++..+ ++..|++++.++
T Consensus       173 ~~i~e~e~~lA~~~gae~--~i~v~nGtt~an~~ai~al~~pGD~--------VLv~~~~H~S~~~~~~~l~Ga~~v~v~  242 (730)
T 1c4k_A          173 GPAVAAEKHAARVYNADK--TYFVLGGSSNANNTVTSALVSNGDL--------VLFDRNNHKSVYNSALAMAGGRPVYLQ  242 (730)
T ss_dssp             THHHHHHHHHHHHTTCSE--EEEESSHHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHTTTTCCEEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhcCCCCE--------EEEcCCchHHHHHHHHHHCCCEEEEEe
Confidence            345678889999999864  5888899999999999999887776        99999999999888 888899999987


Q ss_pred             cCC-C----ccccHHHH-----HHHhhcC------c----eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccc
Q psy10210        254 LTS-S----YTVDLAAL-----QSAITGN------T----VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG  313 (435)
Q Consensus       254 ~~~-~----~~~d~~~l-----~~~i~~~------~----~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~  313 (435)
                      .+. +    +.+|++++     +++++++      +    +++++++|| ++|.+.++++|+++|++||+++|+|++|++
T Consensus       243 ~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~G~v~dl~~I~~la~~~g~~livDeAh~~  321 (730)
T 1c4k_A          243 TNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YDGTIYNAHEVVKRIGHLCDYIEFDSAWVG  321 (730)
T ss_dssp             EEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TTSEEECHHHHHHHHGGGBSEEEEECTTCC
T ss_pred             CCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CCCeecCHHHHHHHHHHcCCeEEEEccccc
Confidence            642 2    44788888     9988765      5    899999985 799999999999999999999999999976


Q ss_pred             hhhhcccccCCCCCCCCCCCCCcc----EEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCC
Q psy10210        314 FLAPFMSAAGYPLPPFDFSLPGVT----SISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRS  389 (435)
Q Consensus       314 ~~~~~~~~~g~~~~~~d~~~~gvd----~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~  389 (435)
                      ++. |... ..+..+++....|+|    +++.|+||++.+|.+.|+++++++.+.............. .......++.+
T Consensus       322 ~~~-f~~~-~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~-~~~~~~stsp~  398 (730)
T 1c4k_A          322 YEQ-FIPM-MRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNN-SFNLFMSTSPF  398 (730)
T ss_dssp             GGG-SSGG-GGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHH-HHHHHSCSSCC
T ss_pred             ccc-cCcc-cCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHH-HHHHhCCCCCc
Confidence            432 2110 000113443344677    9999999997777888888888765421000000000000 00000123444


Q ss_pred             chHHHHHHHHHHHhcHHHHH---HHHHHHHHHHHHHHHh-cCCcccccC
Q psy10210        390 GGIIATCWAAMMYFGFEAQV---WICVRYHFNYKSCLQN-LSDLWLYLP  434 (435)
Q Consensus       390 ~~~ia~~~a~l~~~g~~g~~---~~~~~~~~~~~~~~~~-l~~l~~~~p  434 (435)
                      ...++++-+++..+..++..   ++..+..+.+++.+++ ++++..+.|
T Consensus       399 ~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p  447 (730)
T 1c4k_A          399 YPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP  447 (730)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence            45555555666665543223   3444444455555555 566665543

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.84  E-value=7.7e-20  Score=183.10  Aligned_cols=159  Identities=15%  Similarity=0.105  Sum_probs=129.7

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~  251 (435)
                      ...++++.+++++|.+   ++++|+||++|+.++++++.++++.        |++++++|++....+    +..|++++.
T Consensus        57 ~~~~l~~~la~~~g~~---~~~~~~~gt~a~~~al~~l~~~gd~--------vi~~~~~~~~~~~~~~~~~~~~g~~~~~  125 (412)
T 2cb1_A           57 TAKALEERLKALEGAL---EAVVLASGQAATFAALLALLRPGDE--------VVAAKGLFGQTIGLFGQVLSLMGVTVRY  125 (412)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTTCCTTCE--------EEEETTCCHHHHHHHHHTTTTTTCEEEE
T ss_pred             HHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence            3456667788888764   6899999999999999988655554        999999999876654    447999999


Q ss_pred             EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      +|++      ++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+..        ...+.  
T Consensus       126 ~~~~------~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~--------~~~~~--  189 (412)
T 2cb1_A          126 VDPE------PEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGA--------LCRPL--  189 (412)
T ss_dssp             ECSS------HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTT--------SCCGG--
T ss_pred             ECCC------HHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccc--------cCCcc--
Confidence            9853      8999999999999999999999999999999999999999999999999986621        11122  


Q ss_pred             CCCCccEEEecCCCCCCccCC-cEEEEEeCCc
Q psy10210        332 SLPGVTSISVDTHKYGFTPKG-SSVVLYRDLK  362 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g-~g~il~~~~~  362 (435)
                       ..++|+++.|+||++.+|.+ +|++++.+++
T Consensus       190 -~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~  220 (412)
T 2cb1_A          190 -AWGAHVVVESLTKWASGHGSVLGGAVLSRET  220 (412)
T ss_dssp             -GGTCSEEEEETTTTTTCSSCCCCEEEEECCC
T ss_pred             -ccCCeEEEECCcccccCCCCcEEEEEEeccc
Confidence             24689999999999777765 7877777654

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.84  E-value=3.2e-20  Score=185.24  Aligned_cols=167  Identities=16%  Similarity=0.125  Sum_probs=133.2

Q ss_pred             HHHHHHHHHHhCCCCCCceEE--cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchhHHHH----------HHH
Q psy10210        178 AEVIKMCARMFNGGPETCGCM--TSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPAFDKA----------ANY  244 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~--t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~~~~~----------~~~  244 (435)
                      .++++.+|+++|.+.  .+++  ++||++|+.+++.++.+++|.        |++++ +.|..+...          ++.
T Consensus        62 ~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~~GD~--------Vl~~~~~~y~~~~~~~~~~g~~~~~l~~  131 (409)
T 3jzl_A           62 DTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGILRPDDE--------LLYITGQPYDTLEEIVGIRKQGQGSLKD  131 (409)
T ss_dssp             HHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHHCCTTCE--------EEECSSSCCTTHHHHHTSSSSSSSCTGG
T ss_pred             HHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHhcCCCCE--------EEEeCCCCcHhHHHHHhcccchhhHHHH
Confidence            344557788888753  3333  899999999999999877776        99998 999988753          456


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeC----CCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhc
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSM----PNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPF  318 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~----p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~  318 (435)
                      .|++++.+|+++++.+|+++++++++++|++|++++    |+||+|.+.++++|.++|++  ||+++|+|++|+.++.. 
T Consensus       132 ~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~-  210 (409)
T 3jzl_A          132 FHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY-  210 (409)
T ss_dssp             GTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS-
T ss_pred             cCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc-
Confidence            799999999988899999999999999999999999    99999999999999999999  99999999999866531 


Q ss_pred             ccccCCCCCCCCCCCCCccEEEecCCCCCCccC--CcEEEEEeCCccccc
Q psy10210        319 MSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK--GSSVVLYRDLKYKHC  366 (435)
Q Consensus       319 ~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~--g~g~il~~~~~~~~~  366 (435)
                             ..+.   ..|+|+++.|+||++.++.  ..|+ ++.++++.+.
T Consensus       211 -------~~p~---~~g~Div~~S~sK~lgg~~~~~GG~-v~~~~~li~~  249 (409)
T 3jzl_A          211 -------QEPP---EVGADIIAGSLIKNPGGGLAKTGGY-IAGKEALVDL  249 (409)
T ss_dssp             -------CCSG---GGTCSEEEEETTSGGGTTTCSSCEE-EEECHHHHHH
T ss_pred             -------CCcc---ccCCeEEEECccccCCccCCceEEE-EEeCHHHHHH
Confidence                   1122   3478999999999954432  1366 4455665544

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.84  E-value=7.4e-20  Score=179.53  Aligned_cols=165  Identities=13%  Similarity=0.159  Sum_probs=128.1

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++++|.+++ ++++|+||++|+.++++++.++++.        |++++|+|+++...++..|++++.+|+++++
T Consensus        69 ~lr~~la~~~g~~~~-~i~~t~g~~~al~~~~~~l~~~gd~--------Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~  139 (360)
T 3hdo_A           69 KLREVAGELYGFDPS-WIIMANGSDEVLNNLIRAFAAEGEE--------IGYVHPSYSYYGTLAEVQGARVRTFGLTGDF  139 (360)
T ss_dssp             HHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSSCTHHHHHHHHHTCEEEEECBCTTS
T ss_pred             HHHHHHHHHhCcCcc-eEEEcCCHHHHHHHHHHHHhCCCCE--------EEEcCCChHHHHHHHHHCCCEEEEeeCCCCC
Confidence            455666667776554 8999999999999999999777766        9999999999999999999999999998666


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCcc
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVT  337 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd  337 (435)
                      .+  +++++.+  +++++++++|+||||.+.+++++.++|+++|+++|+|++|++|.       +..  .... ...+.+
T Consensus       140 ~~--~~l~~~~--~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~-------~~~--~~~~~~~~~~~  206 (360)
T 3hdo_A          140 RI--AGFPERY--EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFA-------ESN--ALELVRRHENV  206 (360)
T ss_dssp             SB--TTCCSSB--CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGS-------SCC--CTHHHHHCSSE
T ss_pred             CH--HHHHhhc--CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhC-------Ccc--hhHHhccCCCE
Confidence            55  4444433  46799999999999999999999999999999999999998752       111  1111 123456


Q ss_pred             EEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        338 SISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      +++.|++|... ++.++|+++. ++++.+.
T Consensus       207 i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~  235 (360)
T 3hdo_A          207 VVTRTLSKSYSLAGMRIGLAIA-RPEVIAA  235 (360)
T ss_dssp             EEEEESTTTTSCTTSCCEEEEC-CHHHHHH
T ss_pred             EEEecchHhhcCCccceeeEee-CHHHHHH
Confidence            78889999843 3456788665 5555443

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.84  E-value=1e-19  Score=179.31  Aligned_cols=246  Identities=13%  Similarity=0.059  Sum_probs=160.5

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .++.+.+++.+.+....  ++...  ++.  ....++++.+++++|. + +++++|+||++|+.+++++++....  ++.
T Consensus        45 ~~~~v~~a~~~~~~~~~--~~~~~--y~~--~~~~~l~~~la~~~g~-~-~~v~~~~g~t~a~~~~~~~~~~~~~--~~~  114 (375)
T 2eh6_A           45 AYPKLTEALKEQVEKLL--HVSNL--YEN--PWQEELAHKLVKHFWT-E-GKVFFANSGTESVEAAIKLARKYWR--DKG  114 (375)
T ss_dssp             SCHHHHHHHHHHHHHCS--CCCTT--BCC--HHHHHHHHHHHHTSSS-C-EEEEEESSHHHHHHHHHHHHHHHHH--HTT
T ss_pred             CCHHHHHHHHHHHHhcc--ccCcc--cCC--HHHHHHHHHHHhhcCC-C-CeEEEeCchHHHHHHHHHHHHHHhc--cCC
Confidence            36778888888776531  11111  111  2345677888888887 3 4899999999999999987432110  011


Q ss_pred             CC-CeEEEeCCCchhHHHHHHHcCCE-------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccccc
Q psy10210        224 SL-PEIVLPTTAHPAFDKAANYFGMK-------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD  289 (435)
Q Consensus       224 ~~-~~viv~~~~~~~~~~~~~~~g~~-------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~  289 (435)
                      ++ ++|++++|+|+++...+...+..             +..+|.     .|++++++++++++++|++++++||||.+.
T Consensus       115 ~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~  189 (375)
T 2eh6_A          115 KNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEETAGIIIEVIQGEGGVNE  189 (375)
T ss_dssp             CCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTTEEEEEECSEETTTTSEE
T ss_pred             CCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCCeEEEEEeCccCCCCCcC
Confidence            12 56999999988866555443321             333432     589999999988999999999999999997


Q ss_pred             C----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        290 D----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       290 ~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                      +    +++|.++|++||+++|+|++|+++...     +   .++++...|  .|++++|  |++.++.++|+++.++ ++
T Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~---~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~-~~  258 (375)
T 2eh6_A          190 ASEDFLSKLQEICKEKDVLLIIDEVQTGIGRT-----G---EFYAYQHFNLKPDVIALA--KGLGGGVPIGAILARE-EV  258 (375)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEH-HH
T ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCCCC-----C---cchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcH-HH
Confidence            7    999999999999999999999875321     1   112233333  6888777  7655678899988775 44


Q ss_pred             ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .+..   .....++.++     +  +....+++.++++.+.  .+.+++++..+.+.+.+++++
T Consensus       259 ~~~~---~~~~~~~~~~-----~--~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~  310 (375)
T 2eh6_A          259 AQSF---TPGSHGSTFG-----G--NPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKELG  310 (375)
T ss_dssp             HTTC---CTTSCCCSST-----T--CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTT
T ss_pred             Hhhh---cCCCCCCCCC-----C--CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Confidence            3321   1111222211     1  2222234455555543  667777777777777776654

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.84  E-value=2.1e-19  Score=177.80  Aligned_cols=228  Identities=17%  Similarity=0.151  Sum_probs=149.9

Q ss_pred             HHHHHH-HHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        179 EVIKMC-ARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       179 ~~~~~l-a~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                      ++++.+ ++++|. . ..+++++|||+|+.+++.++ .++++.        |++++++|.++..++...|++++.+|++ 
T Consensus        40 ~l~~~~~a~~~g~-~-~~~v~~~sgt~al~~al~~l~~~~Gd~--------Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~  109 (377)
T 3ju7_A           40 RFEQTIMSGFFQN-R-GAVTTVANATLGLMAAIQLKKRKKGKY--------ALMPSFTFPATPLAAIWCGLEPYFIDISI  109 (377)
T ss_dssp             HHHHHHHHHTSTT-C-SEEEEESCHHHHHHHHHHHHSCTTCCE--------EEEESSSCTHHHHHHHHTTCEEEEECBCT
T ss_pred             HHHHHHHHHHhCC-C-CeEEEeCCHHHHHHHHHHHcCCCCcCE--------EEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence            344456 667762 2 26899999999999999987 666665        9999999999999999999999999998 


Q ss_pred             CCccccHHHHHHHh-hcC--ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAI-TGN--TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       256 ~~~~~d~~~l~~~i-~~~--~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      +++.+|++++++++ +++  |++|+   ++||+|.+.++++|.++|+ ||+++|+|++|+.+... .   +.   +....
T Consensus       110 ~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~-~---~~---~~g~~  178 (377)
T 3ju7_A          110 DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMN-G---GM---HYGQD  178 (377)
T ss_dssp             TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEE-T---TE---ETTTT
T ss_pred             ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeE-C---CE---eccCC
Confidence            67899999999998 666  88887   6778999999999999999 99999999999754321 0   10   11001


Q ss_pred             CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCc-hHHHHHHHHHHHhcHHHHHHH
Q psy10210        333 LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSG-GIIATCWAAMMYFGFEAQVWI  411 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~-~~ia~~~a~l~~~g~~g~~~~  411 (435)
                      ...+++++++.||++.+ ...|+++.+++++.+........-....+. ....|.+.. ..+.++......-..+.+.++
T Consensus       179 ~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~-~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~  256 (377)
T 3ju7_A          179 FSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMGNFGFDTNRE-CTMMGFNCKMSEYAAAIGIATMKKWDDKLKE  256 (377)
T ss_dssp             CSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHTBTTBCTTSC-BCSSCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred             CCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHHhcCCCCCCc-eeeccccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            12357777788999654 345776777766544321111100000011 111111111 112122221122234556666


Q ss_pred             HHHHHHHHHHHHHhcCCc
Q psy10210        412 CVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       412 ~~~~~~~~~~~~~~l~~l  429 (435)
                      .+++.+.+.+.+++++++
T Consensus       257 ~~~~~~~~~~~L~~~~~~  274 (377)
T 3ju7_A          257 RTRISEWYKQLLQSNGLM  274 (377)
T ss_dssp             HHHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHhcCCCCc
Confidence            666777777777766543

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.84  E-value=6.5e-20  Score=185.06  Aligned_cols=233  Identities=15%  Similarity=0.130  Sum_probs=154.4

Q ss_pred             CCC-ccccCCCCCCCCH-HHHHHHHHHHHhCCC-CCC----CCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcCh
Q psy10210         99 AGL-EYFLELPSQGRNR-LEILELVSNYLARGH-YDW----KHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFP  171 (435)
Q Consensus        99 ~~~-~~~~~~P~~~~~~-~~i~~~~~~~~~~~~-~~~----~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~  171 (435)
                      ..+ .+..+.|...+.. +.+.+.+.+....++ .+.    .....+|....|.+++++.+++++......+        
T Consensus        32 ~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~--------  103 (444)
T 3if2_A           32 QPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWN--------  103 (444)
T ss_dssp             SCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC--------
T ss_pred             hhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCC--------
Confidence            345 5667777752111 334444454443200 000    0012456666678899999998886543221        


Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh-----hcCC-CCCeEEEe-CCCchhHHHHH--
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE-----EKGI-SLPEIVLP-TTAHPAFDKAA--  242 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~-----~~g~-~~~~viv~-~~~~~~~~~~~--  242 (435)
                                        +++ +++++|+|+|+|+.++++++.++++.     ..|- ...+|+++ +|+|+.+...+  
T Consensus       104 ------------------~~~-~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~  164 (444)
T 3if2_A          104 ------------------LTS-ENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE  164 (444)
T ss_dssp             ------------------CCG-GGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred             ------------------CCH-HHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence                              223 48999999999999999998776650     0000 00037765 89999887643  


Q ss_pred             ----HHcCCEEEEEecCC-C----ccccHHHHHHH---hhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEE
Q psy10210        243 ----NYFGMKVKHIRLTS-S----YTVDLAALQSA---ITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHV  307 (435)
Q Consensus       243 ----~~~g~~v~~vp~~~-~----~~~d~~~l~~~---i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~liv  307 (435)
                          ...|..++.+|+++ +    +.+|+++++++   +++++++|++++|+||||.+.+   +++|.++|++||+++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~  244 (444)
T 3if2_A          165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLII  244 (444)
T ss_dssp             SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred             cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence                34577888888874 2    47999999998   6778999999999999999966   89999999999999999


Q ss_pred             eccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        308 DCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       308 D~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      |++|+.+...      ...........+.++++.|+||++.++.++|+++ .++++..
T Consensus       245 De~~~~~~~~------~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~-~~~~l~~  295 (444)
T 3if2_A          245 DNAYGMPFPN------IIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIV-ADAKVIE  295 (444)
T ss_dssp             ECTTCTTTTC------CBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEE-CCHHHHH
T ss_pred             ECCCCCcccc------cccccccccCCCCEEEEechhhccCCCCceEEEE-ECHHHHH
Confidence            9999754321      0001111123467888999999855557789855 4555543

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.84  E-value=7.5e-20  Score=181.49  Aligned_cols=250  Identities=15%  Similarity=0.035  Sum_probs=166.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.........      ...+...++++++++++|  . +++++|+||++|+.+++++++.++...+|.
T Consensus        53 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~l~~~la~~~g--~-~~v~~~~~gt~a~~~al~~~~~~~~~~~~~  123 (392)
T 3ruy_A           53 RHPKIINALIDQANRVTLTSRA------FHSDQLGPWYEKVAKLTN--K-EMVLPMNTGAEAVETAIKTARRWAYDVKKV  123 (392)
T ss_dssp             TCHHHHHHHHHHHTTCSCCCTT------SEETTHHHHHHHHHHHHT--C-SEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCHHHHHHHHHHHHhccccccc------cCCHHHHHHHHHHHHhcC--C-CEEEEeCcHHHHHHHHHHHHHHhhhhccCC
Confidence            4789999999888764322111      122345567778888887  3 389999999999999999887763332332


Q ss_pred             C--CCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210        224 S--LPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       224 ~--~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~  288 (435)
                      +  +++|+++.++|++....+...+.             .+..++.+     |++++++++++++++|++++++||||.+
T Consensus       124 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~nptG~~  198 (392)
T 3ruy_A          124 EANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPNTAAFILEPIQGEAGIN  198 (392)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTTEEEEEECSSBSTTTSB
T ss_pred             CCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhccCeEEEEEeCccCCCCCc
Confidence            2  45799999999886655544422             24444432     7999999999999999999999999999


Q ss_pred             cC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCcc
Q psy10210        289 DD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKY  363 (435)
Q Consensus       289 ~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~  363 (435)
                      .+    +++|.++|++||+++|+|++|+++...     |.. ...+......|++++|  |.+.+. .++|+++.++ ++
T Consensus       199 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----g~~-~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~-~~  269 (392)
T 3ruy_A          199 IPPAGFLKEALEVCKKENVLFVADEIQTGLGRT-----GKV-FACDWDNVTPDMYILG--KALGGGVFPISCAAANR-DI  269 (392)
T ss_dssp             CCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTT-----SSS-SGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECH-HH
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeechhCCCcc-----ccc-hhhhccCCCCCEEEEc--hhhhCChhhhEEEEECH-HH
Confidence            76    999999999999999999999876431     110 0122222245888776  874332 5588866654 44


Q ss_pred             ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+..   .....++.+       +.+....+++.++++.+..+.+.+++++..+.+.+.++++
T Consensus       270 ~~~~---~~~~~~~~~-------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~  322 (392)
T 3ruy_A          270 LGVF---EPGSHGSTF-------GGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI  322 (392)
T ss_dssp             HTTC---CTTSSCCSS-------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC
T ss_pred             Hhhh---ccCCcCCCC-------CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence            4331   111112111       2233344566667776655667777777777777777665

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.83  E-value=6.1e-20  Score=183.88  Aligned_cols=167  Identities=15%  Similarity=0.103  Sum_probs=132.9

Q ss_pred             HHHHHHHHHHhCCCCCCceEE--cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchhHHH-----------HHH
Q psy10210        178 AEVIKMCARMFNGGPETCGCM--TSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPAFDK-----------AAN  243 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~--t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~~~~-----------~~~  243 (435)
                      .++++.+|+++|.+.  .+++  ++||++|+.+++.++.+++|.        |++++ +.|.++..           .++
T Consensus        76 ~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~pGD~--------Vl~~~~~~y~~~~~~~g~~~~~~~~~l~  145 (427)
T 3i16_A           76 DSLDAVYARVFNTES--ALVRPHFVNGTHALGAALFGNLRPGNT--------MLSVCGEPYDTLHDVIGITENSNMGSLK  145 (427)
T ss_dssp             HHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHHCCTTCE--------EEESSSSCCGGGHHHHTCSCCCSSCCTG
T ss_pred             HHHHHHHHHHhCCcc--eEEeCCCccHHHHHHHHHHHHhCCCCE--------EEEeCCCccHHHHHHHhccccchHHHHH
Confidence            344467888888754  2333  889999999999999888776        99998 99988763           345


Q ss_pred             HcCCEEEEEecCCCccccHHHHHHHhh--cCceEEEEeC----CCCCcccccCHHHHHHHHHH--cCCcEEEeccccchh
Q psy10210        244 YFGMKVKHIRLTSSYTVDLAALQSAIT--GNTVMLVGSM----PNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFL  315 (435)
Q Consensus       244 ~~g~~v~~vp~~~~~~~d~~~l~~~i~--~~~~~v~~~~----p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~  315 (435)
                      ..|++++.+|+++++.+|+++++++++  ++|++|++++    |+||+|.+.++++|+++|++  +|+++++|++|+.+.
T Consensus       146 ~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~  225 (427)
T 3i16_A          146 EFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFM  225 (427)
T ss_dssp             GGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTS
T ss_pred             HcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcccc
Confidence            679999999998888999999999998  7899999999    99999999999999999999  999999999998665


Q ss_pred             hhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210        316 APFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP--KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       316 ~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p--~g~g~il~~~~~~~~~  366 (435)
                      ..        ..+.   ..|+|+++.|+||++.++  ...|++ +.++++.+.
T Consensus       226 ~~--------~~p~---~~gaDiv~~S~sK~lgg~g~~~gG~i-~~~~~li~~  266 (427)
T 3i16_A          226 DT--------KEPT---DVGADLIAGSLIKNIGGGIAPTGGYL-AGTKDCIEK  266 (427)
T ss_dssp             SS--------SCGG---GGTCSEEEEETTSGGGTTTCCSCEEE-EECHHHHHH
T ss_pred             cc--------CCcc---ccCCeEEEecCcccCCCCCCceEEEE-EECHHHHHH
Confidence            31        1122   247899999999995442  334774 455665544

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.83  E-value=1.2e-19  Score=194.15  Aligned_cols=229  Identities=16%  Similarity=0.066  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ....+.++.+++++|.+.  .+++++|+++|+..++.++.++++.        |+++.++|.++..++...|++++.++.
T Consensus       205 g~v~~~ee~la~l~G~d~--~i~~~~Gtt~a~~~~i~al~~~GD~--------Vlv~~~~h~s~~~~~~~~G~~~v~v~~  274 (755)
T 2vyc_A          205 GAFGESEKYAARVFGADR--SWSVVVGTSGSNRTIMQACMTDNDV--------VVVDRNCHKSIEQGLMLTGAKPVYMVP  274 (755)
T ss_dssp             HHHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHHCCTTCE--------EEEESSCCHHHHHHHHHHCCEEEEECC
T ss_pred             cHHHHHHHHHHHHhCCCc--eEEECCcHHHHHHHHHHHhcCCCCE--------EEECCCchHHHHHHHHHcCCEEEEEeC
Confidence            345677888999999863  5788999999999999999887776        999999999999999999999999987


Q ss_pred             CCC-----ccc-----cHHHHHHHhhc--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccch
Q psy10210        255 TSS-----YTV-----DLAALQSAITG--NTV--------MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF  314 (435)
Q Consensus       255 ~~~-----~~~-----d~~~l~~~i~~--~~~--------~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~  314 (435)
                      +.+     +.+     |++++++++++  +++        ++++++| ||+|.+.++++|+++|++||+++|+|++|+++
T Consensus       275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~  353 (755)
T 2vyc_A          275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY  353 (755)
T ss_dssp             CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred             CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence            632     235     99999999975  344        8889998 68999999999999999999999999999865


Q ss_pred             hhhcccccCCCCCCCCCCCCC--ccE------EEecCCCCCCccCCcEEEEEeCC--ccccccccccCCCCCCCCCCCcc
Q psy10210        315 LAPFMSAAGYPLPPFDFSLPG--VTS------ISVDTHKYGFTPKGSSVVLYRDL--KYKHCQYFVTSDWPGGNYGSPSV  384 (435)
Q Consensus       315 ~~~~~~~~g~~~~~~d~~~~g--vd~------~~~s~hK~~~~p~g~g~il~~~~--~~~~~~~~~~~~~~gg~~~~~~~  384 (435)
                      +. |.... .+..++    .+  +|+      ++.|+||++.+|.++|+++++++  .+....+.......        .
T Consensus       354 ~~-~~~~~-~~~~~~----~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~--------~  419 (755)
T 2vyc_A          354 AR-FNPIY-ADHYAM----RGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH--------A  419 (755)
T ss_dssp             GG-GCGGG-TTSSSS----CSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT--------S
T ss_pred             cc-cCccc-CCcchh----cCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh--------C
Confidence            32 21110 001111    23  454      89999999878888888888776  22111111111111        1


Q ss_pred             ccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH---HHHHHHHhcCC
Q psy10210        385 SGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF---NYKSCLQNLSD  428 (435)
Q Consensus       385 ~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~---~~~~~~~~l~~  428 (435)
                      .+|.+...++++-++++.+..++..++.++..+   .+++.++++++
T Consensus       420 s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~  466 (755)
T 2vyc_A          420 TTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK  466 (755)
T ss_dssp             CSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            134444556666677776655533444444444   44444544444

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.83  E-value=5.5e-20  Score=183.01  Aligned_cols=213  Identities=11%  Similarity=0.066  Sum_probs=148.3

Q ss_pred             CccccCCC-CCCCC---HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        101 LEYFLELP-SQGRN---RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       101 ~~~~~~~P-~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      +++..+.| +...+   .+.+.+.+.+....      .+..+|....|.+++++++++++.......             
T Consensus        31 i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~-------------   91 (401)
T 7aat_A           31 MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK------KMDKEYLPIAGLADFTRASAELALGENSEA-------------   91 (401)
T ss_dssp             EECCCCSCCCTTSCCCCCHHHHHHHHHHHHT------TCCCCCCCTTCCHHHHHHHHHHHHCTTCHH-------------
T ss_pred             eeeeeeeEECCCCCEechHHHHHHHHHhccc------ccccCCCCCCCCHHHHHHHHHHhcCCCccc-------------
Confidence            44555555 33222   12455555555442      123345555677888888888776421110             


Q ss_pred             HHHHHHHHHHHhCCCCCCceEE--cCChHHHHHHHHHHHH---HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCM--TSGGTESIMMACKAYR---DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH  251 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~--t~ggteai~~a~~a~~---~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~  251 (435)
                                   .++ +++++  |+||++|+.+++.++.   ++++.        |++++|+|.++...++..|++++.
T Consensus        92 -------------~~~-~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~--------Vlv~~p~~~~~~~~~~~~g~~~~~  149 (401)
T 7aat_A           92 -------------FKS-GRYVTVQGISGTGSLRVGANFLQRFFKFSRD--------VYLPKPSWGNHTPIFRDAGLQLQA  149 (401)
T ss_dssp             -------------HHT-TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCE--------EEEEESCCTTHHHHHHHTTCEEEE
T ss_pred             -------------ccc-CceEEEecCcchHHHHHHHHHHHHhccCCCE--------EEEcCCCchhHHHHHHHcCCeeEe
Confidence                         123 37776  9999999999998876   44554        999999999999999999999999


Q ss_pred             EecC--CCccccHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        252 IRLT--SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       252 vp~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      +|++  +++.+|++++++.+.   ++++++++++||||||.+   +++++|+++|++||+++++|++|.++...-...  
T Consensus       150 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~--  227 (401)
T 7aat_A          150 YRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINR--  227 (401)
T ss_dssp             EECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHH--
T ss_pred             eeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccc--
Confidence            9985  468899998777765   578999999999999977   678999999999999999999998875410000  


Q ss_pred             CCCCCCC--CCCCCccEEEecCCCCCCccCC--cEEEEE
Q psy10210        324 YPLPPFD--FSLPGVTSISVDTHKYGFTPKG--SSVVLY  358 (435)
Q Consensus       324 ~~~~~~d--~~~~gvd~~~~s~hK~~~~p~g--~g~il~  358 (435)
                       +...+.  .......+++.|++|. +++.|  +|+++.
T Consensus       228 -~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~RiG~l~~  264 (401)
T 7aat_A          228 -DAWALRHFIEQGIDVVLSQSYAKN-MGLYGERAGAFTV  264 (401)
T ss_dssp             -HTHHHHHHHHTTCCCEEEEECTTT-SCCGGGCEEEEEE
T ss_pred             -cHHHHHHHHhcCCcEEEEecCCcc-cccccCceEEEEE
Confidence             000010  0122346778899998 45444  788776

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.83  E-value=2.3e-20  Score=185.83  Aligned_cols=228  Identities=17%  Similarity=0.148  Sum_probs=152.4

Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH---HHHHHHcCC--
Q psy10210        173 VCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---DKAANYFGM--  247 (435)
Q Consensus       173 ~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~---~~~~~~~g~--  247 (435)
                      ...++..+++++++++|.++. +++++ +|++|+.++++++.++++.        |++++|+|+++   ..+++..|.  
T Consensus        67 ~~~~e~~ar~~la~~~g~~~~-~i~~~-sGt~a~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~g~~~  136 (407)
T 2dkj_A           67 IDRVESLAIERAKALFGAAWA-NVQPH-SGSQANMAVYMALMEPGDT--------LMGMDLAAGGHLTHGSRVNFSGKLY  136 (407)
T ss_dssp             HHHHHHHHHHHHHHHHTCSEE-ECCCS-SHHHHHHHHHHHHCCTTCE--------EEEECGGGTCCGGGTCTTSHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhCCCcc-eEEec-chHHHHHHHHHHhcCCCCE--------EEEecccccCccchHHHHHhcCceE
Confidence            335666677899999988642 34444 4577999999998665555        99999999887   355555666  


Q ss_pred             EEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        248 KVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       248 ~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      ..+.++++ +++.+|++++++++++ ++++|++++|+||  .+.++++|.++|++||+++|+|++|+.+....    +..
T Consensus       137 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~----~~~  210 (407)
T 2dkj_A          137 KVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAA----GLH  210 (407)
T ss_dssp             EEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT----TCS
T ss_pred             EEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEcccccccccc----Ccc
Confidence            44444444 3678999999999985 8999999999997  67889999999999999999999998843321    211


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc-
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG-  404 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g-  404 (435)
                      ....    ...|+++.|+||++.|+.+ |+++.+++++.+........|..         ++.+...++++.+++..+. 
T Consensus       211 ~~~~----~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~a~~~al~~~~~  276 (407)
T 2dkj_A          211 PNPL----PYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ---------GGPLEHVIAGKAVAFFEALQ  276 (407)
T ss_dssp             CCCT----TTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC---------SSCCHHHHHHHHHHHHHHHS
T ss_pred             CCcc----ccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc---------CCCcHHHHHHHHHHHHHHHH
Confidence            1111    1369999999998667776 88776645654432221222211         1222223334555665542 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        405 --FEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       405 --~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                        .+.+.++.++..+.+.+.++++ ++..
T Consensus       277 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  304 (407)
T 2dkj_A          277 PEFKEYSRLVVENAKRLAEELARR-GYRI  304 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhC-Ccee
Confidence              2455566666666666666665 4443

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.83  E-value=9.9e-20  Score=182.32  Aligned_cols=159  Identities=16%  Similarity=0.147  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----cCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----FGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~  251 (435)
                      ...++++.+++++|.+   .+++++||++|+.++++++.++++.        |+++++.|+++...+..    .|++++.
T Consensus        82 ~~~~l~~~la~~~g~~---~~~~~~sG~~Ai~~al~~l~~~Gd~--------Vi~~~~~y~~~~~~~~~~~~~~g~~~~~  150 (414)
T 3ndn_A           82 TVSVFEERLRLIEGAP---AAFATASGMAAVFTSLGALLGAGDR--------LVAARSLFGSCFVVCSEILPRWGVQTVF  150 (414)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTTCCTTCE--------EEEESCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEcCCccchHHHHHHHHHHHcCcEEEE
Confidence            4455667788888753   6789999999999999998777766        99999999998777644    8999999


Q ss_pred             EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      +|.+     |+++++++++++|++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+...         .+.  
T Consensus       151 v~~~-----d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~---------~~~--  214 (414)
T 3ndn_A          151 VDGD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQ---------QGF--  214 (414)
T ss_dssp             ECTT-----CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC---------CCG--
T ss_pred             eCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccC---------Cch--
Confidence            9875     899999999999999999999999999999999999999999999999999854331         122  


Q ss_pred             CCCCccEEEecCCCCCCccCC---cEEEEEeCCcc
Q psy10210        332 SLPGVTSISVDTHKYGFTPKG---SSVVLYRDLKY  363 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g---~g~il~~~~~~  363 (435)
                       ..|+|+++.|++|++ ++.|   .|+++.+++.+
T Consensus       215 -~~g~div~~S~sK~l-~~~G~~~~G~vv~~~~~~  247 (414)
T 3ndn_A          215 -PLGVDVVVYSGTKHI-DGQGRVLGGAILGDREYI  247 (414)
T ss_dssp             -GGTCSEEEEETTTTT-TCSSCCCCEEEEECHHHH
T ss_pred             -hcCCCeEeccCCccc-cCCCCceEEEEEECHHHH
Confidence             347899999999995 5544   67766655433

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.83  E-value=3.3e-19  Score=180.22  Aligned_cols=213  Identities=12%  Similarity=0.085  Sum_probs=148.2

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|..+ .++.+.+.+.+.+.....  ..+...|....|.+++++++++++. +..                  
T Consensus        71 ~i~l~~g~~~~~-~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~-~g~------------------  128 (449)
T 3qgu_A           71 IISLGIGDTTEP-LPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGALREAVASTFY-GHA------------------  128 (449)
T ss_dssp             CEECSSCCCCCC-CCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHHHHHHHHHHH-TTT------------------
T ss_pred             EEEeeCCCCCCC-CCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHHHHHHHHHHH-cCC------------------
Confidence            344555555553 455677777766653110  0123344445567788888877765 211                  


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE----------E
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK----------V  249 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~----------v  249 (435)
                               +.++ +++++|+|+++++.++ .++.++++.        |++++|+|+++...++..|.+          +
T Consensus       129 ---------~~~~-~~i~~t~G~~~al~~~-~~l~~~gd~--------Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~  189 (449)
T 3qgu_A          129 ---------GRAA-DEIFISDGSKCDIARI-QMMFGSKPT--------VAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGI  189 (449)
T ss_dssp             ---------TCCG-GGEEEESCHHHHHHHH-HHHHCSSSC--------EEEEESCCTHHHHHHHHHTCSCCBCSSSBTTE
T ss_pred             ---------CCCH-HHEEEccCHHHHHHHH-HHHhCCCCE--------EEEcCCCChhHHHHHHHcCCccccccccccee
Confidence                     1233 4899999999999998 777766666        999999999999999999998          9


Q ss_pred             EEEecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        250 KHIRLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       250 ~~vp~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +.+|+++  ++..|+++.     +++++|++++|+||||.+   +++++|+++|++||+++|+|++|++|...     +.
T Consensus       190 ~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~-----~~  259 (449)
T 3qgu_A          190 EYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISN-----PD  259 (449)
T ss_dssp             EEEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCC-----TT
T ss_pred             EEEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcC-----CC
Confidence            9999874  334444332     578999999999999998   56899999999999999999999987652     11


Q ss_pred             CCCCC-CCC-CCCccEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210        325 PLPPF-DFS-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYK  364 (435)
Q Consensus       325 ~~~~~-d~~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~  364 (435)
                      ....+ .+. ..++++++.|++|.+. ++.++|+++.++ ++.
T Consensus       260 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~  301 (449)
T 3qgu_A          260 CPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPK-ALK  301 (449)
T ss_dssp             SCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCT-TCB
T ss_pred             CCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCH-HHH
Confidence            11111 111 1356788999999843 345689966554 443

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.83  E-value=1.9e-19  Score=179.09  Aligned_cols=254  Identities=11%  Similarity=0.008  Sum_probs=166.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH--HhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD--YAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~--~~~~~~g  222 (435)
                      .|++.+++.+.+..... ++..+....+..+...++++.+++++|.+  +++++|+|++ ++..++.++..  +++    
T Consensus        62 ~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sG~~-a~~~~~~~l~~~~~gd----  133 (401)
T 2bwn_A           62 HPVVLAAMHEALEAVGA-GSGGTRNISGTTAYHRRLEAEIAGLHQKE--AALVFSSAYN-ANDATLSTLRVLFPGL----  133 (401)
T ss_dssp             CHHHHHHHHHHHHHHCS-CCCSBTTTBCCBHHHHHHHHHHHHHTTCS--EEEEESCHHH-HHHHHHHHHHHHSTTC----
T ss_pred             CHHHHHHHHHHHHHcCC-CCCCcCcccCChHHHHHHHHHHHHHhCCC--cEEEECCcHH-HHHHHHHHHhcCCCCC----
Confidence            57899999888876432 22111111122345567788889999863  4677766655 88888776543  344    


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                          +|+++.++|+++...++..|++++.+|.+     |+++++++++    +++++|++++|+||||.+.++++|.++|
T Consensus       134 ----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~  204 (401)
T 2bwn_A          134 ----IIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIA  204 (401)
T ss_dssp             ----EEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred             ----EEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHH
Confidence                49999999999999999999999999974     6888888886    5789999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      ++||+++|+|++|+.+.+.   ..|.+.. ..+. ..+.|++..|++|.+ +..| |+++. ++++.+........|...
T Consensus       205 ~~~~~~li~Dea~~~g~~~---~~g~~~~~~~~~-~~~~~i~~~s~sK~~-~~~G-G~~~~-~~~~~~~l~~~~~~~~~~  277 (401)
T 2bwn_A          205 EEFGALTYIDEVHAVGMYG---PRGAGVAERDGL-MHRIDIFNGTLAKAY-GVFG-GYIAA-SARMVDAVRSYAPGFIFS  277 (401)
T ss_dssp             HHHTCEEEEECTTTTTTSS---TTSCCHHHHHTC-GGGCSEEEEESSSTT-CSCC-EEEEE-CHHHHHHHHHHCHHHHTS
T ss_pred             HHcCCEEEEeccccccccC---CCCceeeeccCc-cccCcEEEeechhhc-cCCC-CEEec-CHHHHHHHHHhCcCceec
Confidence            9999999999999854331   1111100 0011 123578888999994 5445 77554 454433211111111000


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHhcH---HHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYFGF---EAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~---~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                             .++ +....+++.++++.+..   +...++.++..+.+.+.++++ ++..
T Consensus       278 -------~~~-~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  325 (401)
T 2bwn_A          278 -------TSL-PPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPI  325 (401)
T ss_dssp             -------BCC-CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCB
T ss_pred             -------CCC-CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence                   011 22344566677776654   455666666666666666655 4443

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.83  E-value=1.7e-19  Score=174.84  Aligned_cols=159  Identities=17%  Similarity=0.146  Sum_probs=128.3

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~  254 (435)
                      ++++.+++++|.+   +.+++++|++|+.++++++..+++.        |++++++|+++...+    +..|++++.+|.
T Consensus         2 ~l~~~la~~~g~~---~~i~~~sG~~a~~~~~~~~~~~g~~--------v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   70 (331)
T 1pff_A            2 ALEGKIAKLEHAE---ACAATASGMGAIAASVWTFLKAGDH--------LISDDCLYGCTHALFEHQLRKFGVEVDFIDM   70 (331)
T ss_dssp             HHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             hHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCCcchHHHHHHHHHHhcCCEEEEeCC
Confidence            4677888899875   3445555599999999988655554        999999999987765    457999999885


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH-cCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK-YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~-~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                           .|++++++++++++++|++++|+||+|.+.++++|.++|++ ||+++|+|++|+.+...         .+.   .
T Consensus        71 -----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~---------~~~---~  133 (331)
T 1pff_A           71 -----AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT---------NPL---D  133 (331)
T ss_dssp             -----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC---------CGG---G
T ss_pred             -----CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccC---------Chh---h
Confidence                 47889999999899999999999999999999999999999 99999999999876541         022   2


Q ss_pred             CCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      .++|+++.|+||++++|.+  .|+++.+++++.+
T Consensus       134 ~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~  167 (331)
T 1pff_A          134 LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAK  167 (331)
T ss_dssp             GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHH
T ss_pred             cCCcEEEEECccccCCCCCceEEEEEeCcHHHHH
Confidence            4689999999998666765  6886666535543

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.83  E-value=1.1e-19  Score=181.59  Aligned_cols=225  Identities=14%  Similarity=0.130  Sum_probs=146.7

Q ss_pred             CCccccCCCCCCCCH-HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210        100 GLEYFLELPSQGRNR-LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      .+.+..+.|+..+.+ +.+.+.+.+.+......  .....|....|.+++++++++++......+               
T Consensus        33 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~---------------   95 (417)
T 3g7q_A           33 AIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAA--DALCNYDGPQGKTALLNALAVLLRETLGWD---------------   95 (417)
T ss_dssp             CEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHH--HHHHSTTCTTSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             ceEecCcCCCCCChHHHHHHHHHHHHhhCCccc--ceeeccCCCCCcHHHHHHHHHHHHHHhCCC---------------
Confidence            455666777652222 44555555554432100  012345566688899999998886543221               


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEe-CCCchhHHHHHHHc------CCEEEE
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLP-TTAHPAFDKAANYF------GMKVKH  251 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~-~~~~~~~~~~~~~~------g~~v~~  251 (435)
                                 .++ +++++|+|+|+|+.++++++.++++.  | .+.+|+++ +|+|+++...+...      +..+..
T Consensus        96 -----------~~~-~~i~~t~G~t~al~~~~~~l~~~gd~--~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  160 (417)
T 3g7q_A           96 -----------IEP-QNIALTNGSQSAFFYLFNLFAGRRAD--G-STKKVLFPLAPEYIGYADSGLEDDLFVSARPNIEL  160 (417)
T ss_dssp             -----------CCG-GGEEEESCHHHHHHHHHHHHSBC-------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEE
T ss_pred             -----------CCc-ccEEEeCCcHHHHHHHHHHHcCCCcc--C-CcceEEEeCCCccccchhhccchhhhccccCcccc
Confidence                       223 48999999999999999999876651  0 01248887 99999988766432      334444


Q ss_pred             EecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        252 IRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       252 vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ++.+ .++.+|+++++  +++++++|++++|+||||.+-+   +++|.++|++||+++|+|++|+.+...      ....
T Consensus       161 ~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~------~~~~  232 (417)
T 3g7q_A          161 LPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG------IIFS  232 (417)
T ss_dssp             EGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC------CBCS
T ss_pred             cCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc------cccc
Confidence            5443 24578999988  6788999999999999999955   999999999999999999999764321      0000


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      .......+.++++.|++|++.++.++|+++ .++++.+
T Consensus       233 ~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~-~~~~~~~  269 (417)
T 3g7q_A          233 EARPLWNPNIILCMSLSKLGLPGSRCGIII-ANDKTIT  269 (417)
T ss_dssp             CCCCCCCTTEEEEEESGGGTCTTSCCEEEE-CCHHHHH
T ss_pred             ccccCCCCCEEEEEechhccCCCcceEEEE-eCHHHHH
Confidence            111123456888889999865556789854 4555544

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.83  E-value=2.8e-19  Score=177.21  Aligned_cols=161  Identities=20%  Similarity=0.226  Sum_probs=128.6

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                      .++++.+++++|.+   ++++|+||++|+.++++++ ..+++.        |++++++|+++..+++..|++++.+|+++
T Consensus        42 ~~l~~~la~~~~~~---~~~~~~~gt~al~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~  110 (393)
T 1mdo_A           42 QELEAAFCRLTGNQ---YAVAVSSATAGMHIALMALGIGEGDE--------VITPSMTWVSTLNMIVLLGANPVMVDVDR  110 (393)
T ss_dssp             HHHHHHHHHHHCCS---EEEEESCHHHHHHHHHHHTTCCTTCE--------EEEESSSCHHHHHHHHHTTCEEEEECBCT
T ss_pred             HHHHHHHHHHhCCC---cEEEecChHHHHHHHHHHcCCCCCCE--------EEeCCCccHhHHHHHHHCCCEEEEEeccC
Confidence            34555666677653   6899999999999999998 555554        99999999999999999999999999984


Q ss_pred             -CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        257 -SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       257 -~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                       ++.+|++++++++++++++|+++   ||+|.+.++++|.++|++||+++|+|++|+.+....    +.   ++     +
T Consensus       111 ~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~----~~---~~-----~  175 (393)
T 1mdo_A          111 DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYK----GR---HI-----G  175 (393)
T ss_dssp             TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEET----TE---ET-----T
T ss_pred             CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeEC----Ce---ec-----C
Confidence             47899999999998889988875   479999999999999999999999999998543211    10   11     2


Q ss_pred             -ccEEEecCC--CCCCccCCcEEEEEeCCcccc
Q psy10210        336 -VTSISVDTH--KYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 -vd~~~~s~h--K~~~~p~g~g~il~~~~~~~~  365 (435)
                       .|+++.|+|  |++.+ ...|+++.+++++.+
T Consensus       176 ~~d~~~~S~~k~K~l~~-~~~g~~~~~~~~~~~  207 (393)
T 1mdo_A          176 ARGTAIFSFHAIKNITC-AEGGIVVTDNPQFAD  207 (393)
T ss_dssp             SSSEEEEECCTTSSSCS-SSCEEEEESCHHHHH
T ss_pred             CCCeEEEeCCCCCcccc-ccceEEEeCCHHHHH
Confidence             789999988  98644 346776666565543

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.83  E-value=1.5e-19  Score=180.09  Aligned_cols=159  Identities=23%  Similarity=0.223  Sum_probs=128.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEE
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVK  250 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~  250 (435)
                      ....++++.+++++|.+   +.+++++|++|+.++++++..+++.        |+++++.|+++...+    ...|++++
T Consensus        65 ~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~l~~~~~~gd~--------vl~~~~~~~~~~~~~~~~~~~~g~~~~  133 (398)
T 1gc0_A           65 PTLNLLEARMASLEGGE---AGLALASGMGAITSTLWTLLRPGDE--------VLLGNTLYGCTFAFLHHGIGEFGVKLR  133 (398)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSCCSHHHHHHHHTGGGGTCEEE
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhcCCCE--------EEEeCCCchhHHHHHHHHHHHcCCEEE
Confidence            34456667778888764   4566666789999999998665554        999999999987776    66799999


Q ss_pred             EEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        251 HIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       251 ~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                      .+|.+     |++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+...      .   ++ 
T Consensus       134 ~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~------~---~~-  198 (398)
T 1gc0_A          134 HVDMA-----DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ------R---PL-  198 (398)
T ss_dssp             EECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC------C---GG-
T ss_pred             EECCC-----CHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccC------C---ch-
Confidence            98863     899999999999999999999999999999999999999999999999999877541      1   22 


Q ss_pred             CCCCCccEEEecCCCCCCccCC--cEEEEEeCC
Q psy10210        331 FSLPGVTSISVDTHKYGFTPKG--SSVVLYRDL  361 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~  361 (435)
                        ..++|+++.|+||++.+|.+  .|+++.+++
T Consensus       199 --~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~  229 (398)
T 1gc0_A          199 --ELGADLVVHSATKYLSGHGDITAGIVVGSQA  229 (398)
T ss_dssp             --GGTCSEEEEETTTTTTCSSSCCCEEEEECHH
T ss_pred             --hhCceEEEECCccccCCCCCCeEEEEEEChH
Confidence              23689999999999766654  477665544

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.83  E-value=1.5e-19  Score=180.47  Aligned_cols=219  Identities=9%  Similarity=-0.012  Sum_probs=149.4

Q ss_pred             CccccCCC-CC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        101 LEYFLELP-SQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       101 ~~~~~~~P-~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      +++..+.| +.   ...++.+.+.+.+.....     .....|....|.+++++++++++.......             
T Consensus        33 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~~y~~~~g~~~lr~~la~~~~~~~~~~-------------   94 (412)
T 1ajs_A           33 VNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS-----SLNHEYLPILGLAEFRTCASRLALGDDSPA-------------   94 (412)
T ss_dssp             EECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT-----TCCCCCCCTTCCHHHHHHHHHHHHCTTCHH-------------
T ss_pred             eeeccceecCCCCCccccHHHHHHHHHhhhCh-----hhccCCCCCCCCHHHHHHHHHHHhcCCCCc-------------
Confidence            44555554 21   234467777777665321     112234455677888888888875321100             


Q ss_pred             HHHHHHHHHHHhCCCCCCceEE--cCChHHHHHHHHHHH--HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE-EEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCM--TSGGTESIMMACKAY--RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK-VKH  251 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~--t~ggteai~~a~~a~--~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~-v~~  251 (435)
                                   .++ +++++  |+||++|+.++++.+  ..++.   ..+.++|++++|+|+++...++..|++ ++.
T Consensus        95 -------------~~~-~~v~~~~t~gg~~a~~~~~~~~~~~~~g~---~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~  157 (412)
T 1ajs_A           95 -------------LQE-KRVGGVQSLGGTGALRIGAEFLARWYNGT---NNKDTPVYVSSPTWENHNGVFTTAGFKDIRS  157 (412)
T ss_dssp             -------------HHT-TCEEEEEEEHHHHHHHHHHHHHHHHSSSS---SCCCSCEEEEESCCTHHHHHHHHTTCSCEEE
T ss_pred             -------------cCC-CcEEEEECCCcHHHHHHHHHHHHHhCcCc---CCCCCeEEEcCCCcHHHHHHHHHcCCceeEE
Confidence                         022 37999  999999999997643  33440   000034999999999999999999999 999


Q ss_pred             EecC--CCccccHHHHHHHhhc---CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        252 IRLT--SSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       252 vp~~--~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      +|++  +++.+|++++++++++   +++++++++|+||||.+   +++++|.++|++||+++|+|++|.++...-...  
T Consensus       158 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~--  235 (412)
T 1ajs_A          158 YRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEK--  235 (412)
T ss_dssp             EECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHH--
T ss_pred             EeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccc--
Confidence            9984  5678999999999875   67888899999999998   668899999999999999999998875410000  


Q ss_pred             CCCCCCC-CC-CCCccEEEecCCCCCCccCC--cEEEEE
Q psy10210        324 YPLPPFD-FS-LPGVTSISVDTHKYGFTPKG--SSVVLY  358 (435)
Q Consensus       324 ~~~~~~d-~~-~~gvd~~~~s~hK~~~~p~g--~g~il~  358 (435)
                       ...++. +. ....++++.|++|. +++.|  +|+++.
T Consensus       236 -~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~riG~~~~  272 (412)
T 1ajs_A          236 -DAWAIRYFVSEGFELFCAQSFSKN-FGLYNERVGNLTV  272 (412)
T ss_dssp             -HTHHHHHHHHTTCCEEEEEECTTT-SCCGGGCEEEEEE
T ss_pred             -cchHHHHHhccCCcEEEEEecccc-cCCCCcceEEEEE
Confidence             000111 11 12234778899998 45555  788776

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.83  E-value=1e-19  Score=178.42  Aligned_cols=254  Identities=11%  Similarity=0.017  Sum_probs=165.3

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCC----CCcChhHHHHHHHHHHHHHHHhCCCCCCceEE-cCChHHHHHHHHHHHHHHhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLH----PDIFPGVCKMEAEVIKMCARMFNGGPETCGCM-TSGGTESIMMACKAYRDYARE  219 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~-t~ggteai~~a~~a~~~~~~~  219 (435)
                      ++++.+++.+.+..+. .|+..    .+..+.+.++..++++.+++++|++++.++++ |+|||+++.+++..+. ++++
T Consensus        17 ~~~V~~a~~~~~~~~~-~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~   94 (361)
T 3m5u_A           17 PLEILEQAQKELCDYQ-GRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGV   94 (361)
T ss_dssp             CHHHHHHHHHTSSSGG-GSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSC
T ss_pred             cHHHHHHHHHHHHhcc-cCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCe
Confidence            5555566555544322 23322    23356778888999999999999976557887 9999999999999886 4443


Q ss_pred             hcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc--ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        220 EKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT--VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       220 ~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~--~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                           ...|+....+|. +...++..|+++..+|++.++.  +++++ +  ++++|++|.+++..|.+|++.+.     +
T Consensus        95 -----~~~i~~~~~~~~-~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~~~~e~~tG~~~~~-----i  160 (361)
T 3m5u_A           95 -----CEYANTGVWTKK-AIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYICSNNTIYGTQYQN-----Y  160 (361)
T ss_dssp             -----EEEEECSHHHHH-HHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEEESEETTTTEECSS-----C
T ss_pred             -----EEEEeCCHHHHH-HHHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEEeCCCCCcceeCCc-----c
Confidence                 011222222332 3455677799999999987664  56666 4  88899999999999999998441     3


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC-
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG-  376 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g-  376 (435)
                      ++ +|+++|+|++++.+.           .|+|+.  ++|++++++||++ ||.|+|+++++++.+........+.+.. 
T Consensus       161 ~~-~~~~~~vD~~q~~g~-----------~~id~~--~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~~~~p~~~~~  225 (361)
T 3m5u_A          161 PK-TKTPLIVDASSDFFS-----------RKVDFS--NIALFYGGVQKNA-GISGLSCIFIRKDMLERSKNKQIPSMLNY  225 (361)
T ss_dssp             CC-CSSCEEEECGGGTTS-----------SCCCCT--TEEEEEEETTTTS-SCTTCEEEEEEHHHHHHHHTCCCCGGGCH
T ss_pred             cc-cCCEEEEEcccccCC-----------CCCCcc--cCCEEEEechhcc-CCCccEEEEEcHHHHhhhcCCCCCceeeh
Confidence            34 499999999986443           367765  4899999999996 8999999888765432110000111100 


Q ss_pred             CCC-CCCccccCCCchHHHHHHHHHHHh----cHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        377 GNY-GSPSVSGSRSGGIIATCWAAMMYF----GFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       377 g~~-~~~~~~gsr~~~~ia~~~a~l~~~----g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      +.. ......++.+...+.++-++++.+    |.+...++.+++.+++.+.+++++++
T Consensus       226 ~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~  283 (361)
T 3m5u_A          226 LTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGF  283 (361)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             HHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            000 011122455555565666666654    56666677777777777777766654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.83  E-value=1.6e-19  Score=182.18  Aligned_cols=160  Identities=16%  Similarity=0.116  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEE
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVK  250 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~  250 (435)
                      ....++++.+++++|.+  ++++ +++|++|+.++++++.++++.        |+++++.|+++...    ++..|++++
T Consensus       114 ~~~~~l~~~lA~l~g~~--~~v~-~~sG~~Ai~~al~~l~~~Gd~--------Vi~~~~~y~~~~~~~~~~~~~~G~~v~  182 (445)
T 1qgn_A          114 PTTVVLEEKISALEGAE--STLL-MASGMCASTVMLLALVPAGGH--------IVTTTDCYRKTRIFIETILPKMGITAT  182 (445)
T ss_dssp             HHHHHHHHHHHHHHTCS--EEEE-ESCHHHHHHHHHHHHSCSSCE--------EEEETTSCHHHHHHHHHTGGGGTCEEE
T ss_pred             hHHHHHHHHHHHHhCCC--cEEE-eCCHHHHHHHHHHHHhCCCCE--------EEEcCCCchhHHHHHHHHHHHcCCEEE
Confidence            44566777888899875  2444 455569999999988766655        99999999987664    456799999


Q ss_pred             EEecCCCccccHHHHHHHhhcCc-eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        251 HIRLTSSYTVDLAALQSAITGNT-VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       251 ~vp~~~~~~~d~~~l~~~i~~~~-~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      .+|.+     |+++++++++++| ++|++++|+||+|.+.|+++|.++|++||+++|+|++|+.+..         ..+.
T Consensus       183 ~v~~~-----d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~---------~~~~  248 (445)
T 1qgn_A          183 VIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN---------QKAL  248 (445)
T ss_dssp             EECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT---------CCTT
T ss_pred             EeCCC-----CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc---------CCcc
Confidence            99864     8999999999999 9999999999999999999999999999999999999975432         1122


Q ss_pred             CCCCCCccEEEecCCCCCCccCC---cEEEEEeCCccc
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKG---SSVVLYRDLKYK  364 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g---~g~il~~~~~~~  364 (435)
                         ..|+|+++.|+||++ ++.|   .|+++.+ +++.
T Consensus       249 ---~~g~Div~~S~sK~~-gg~gd~~~G~l~~~-~~l~  281 (445)
T 1qgn_A          249 ---ALGADLVLHSATKFL-GGHNDVLAGCISGP-LKLV  281 (445)
T ss_dssp             ---TTTCSEEEECTTTTT-TCSSSCCCEEEEEC-HHHH
T ss_pred             ---ccCCEEEEECCcccc-cccccceEEEEEEC-HHHH
Confidence               347899999999994 5665   7885554 4443

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.83  E-value=1.4e-19  Score=183.15  Aligned_cols=151  Identities=13%  Similarity=0.117  Sum_probs=115.5

Q ss_pred             CceEE--cCChHHHHHHH--HHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH----HcCCEEEEEec-CC--CccccH
Q psy10210        194 TCGCM--TSGGTESIMMA--CKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN----YFGMKVKHIRL-TS--SYTVDL  262 (435)
Q Consensus       194 ~~~~~--t~ggteai~~a--~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~----~~g~~v~~vp~-~~--~~~~d~  262 (435)
                      +++++  |+|||+|+.++  +.++..+++.        |++++|+|+.+...++    ..|++++.+|+ ++  ++.+|+
T Consensus       118 ~~i~~~~t~ggt~al~l~~~~~~~~~~gd~--------Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~  189 (448)
T 3meb_A          118 GRIASCQSLSGTGSLHIGFEFLHLWMPKAE--------FYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDF  189 (448)
T ss_dssp             TCEEEEEESHHHHHHHHHHHHHHHHCTTCC--------EEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCH
T ss_pred             CcEEEEECCcHHHHHHHHHHHHHHhCCCCE--------EEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCH
Confidence            48999  99999999884  4455556655        9999999999999999    99999999998 54  488999


Q ss_pred             HHHHHHhhc---CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-C-CCC
Q psy10210        263 AALQSAITG---NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-F-SLP  334 (435)
Q Consensus       263 ~~l~~~i~~---~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~-~~~  334 (435)
                      +++++++++   +++++++++||||||.+   +++++|+++|++||+++|+|++|+++...-...   ....++ + ...
T Consensus       190 e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~---~~~~~~~~~~~~  266 (448)
T 3meb_A          190 SNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEA---DAFAVRMFVDAG  266 (448)
T ss_dssp             HHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHH---HTHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCccc---CchhHHHHhhcC
Confidence            999999984   57889999999999998   557779999999999999999999875420000   000010 0 111


Q ss_pred             CccEEEecCCCCCCccC--CcEEE
Q psy10210        335 GVTSISVDTHKYGFTPK--GSSVV  356 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~--g~g~i  356 (435)
                      .-.+++.|+||. +++.  ++|++
T Consensus       267 ~~~i~~~S~SK~-~g~~G~RiG~l  289 (448)
T 3meb_A          267 VEVLVAQSFSKN-FGLYGERIGCL  289 (448)
T ss_dssp             CCEEEEEECTTT-SCCGGGCCEEE
T ss_pred             CcEEEEeccccc-CCCccccceee
Confidence            224667899998 4544  47886

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.83  E-value=1.3e-19  Score=179.86  Aligned_cols=245  Identities=13%  Similarity=0.023  Sum_probs=167.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH--HHhhhhc
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR--DYAREEK  221 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~--~~~~~~~  221 (435)
                      .+|++.+++.+.+.......+.    +  ..+...++++.+++++|.++ +++++|+||++|+.+++++++  .+++   
T Consensus        62 ~~~~v~~a~~~~~~~~~~~~~~----~--~~~~~~~l~~~la~~~~~~~-~~v~~~~gg~~a~~~al~~~~~~~~~~---  131 (395)
T 1vef_A           62 GNPEVVEAVKRQAETLMAMPQT----L--PTPMRGEFYRTLTAILPPEL-NRVFPVNSGTEANEAALKFARAHTGRK---  131 (395)
T ss_dssp             TCHHHHHHHHHHHHHCCCCCTT----S--CCHHHHHHHHHHHHTSCTTE-EEEEEESSHHHHHHHHHHHHHHHHSCC---
T ss_pred             CCHHHHHHHHHHHHhCCCCccc----c--CCHHHHHHHHHHHHhcCCCc-CEEEEcCcHHHHHHHHHHHHHHHhCCC---
Confidence            4688899998888753221111    1  23466778888999998654 489999999999999999875  3333   


Q ss_pred             CCCCCeEEEeCCCchh-HHHHHHHcCCE------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210        222 GISLPEIVLPTTAHPA-FDKAANYFGMK------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       222 g~~~~~viv~~~~~~~-~~~~~~~~g~~------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~  288 (435)
                           +|++++++|++ +..++...|.+            +..+|.     .|++++++++++++++|++++++||||.+
T Consensus       132 -----~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~~~v~~~~~~~~tG~~  201 (395)
T 1vef_A          132 -----KFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEETAAVILEPVQGEGGVR  201 (395)
T ss_dssp             -----EEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETTTTSE
T ss_pred             -----eEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccCEEEEEEeCccCCCCcc
Confidence                 49999998865 44566666765            333332     48999999998889999988888999988


Q ss_pred             cC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        289 DD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       289 ~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      .+    +++|.++|++||+++|+|++|+++...     |.. .+++....+.|+++  +||++.++.++|+++.+++ +.
T Consensus       202 ~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~-----g~~-~~~~~~~~~~d~~s--~sK~~~~g~~~G~~~~~~~-~~  272 (395)
T 1vef_A          202 PATPEFLRAAREITQEKGALLILDEIQTGMGRT-----GKR-FAFEHFGIVPDILT--LAKALGGGVPLGVAVMREE-VA  272 (395)
T ss_dssp             ECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----SSS-STHHHHTCCCSEEE--ECGGGGTTSSCEEEEEEHH-HH
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEEecccCCccC-----Cch-hHhhhcCCCCCEEE--EcccccCCCceEEEEehHH-HH
Confidence            66    999999999999999999999865321     110 01122222467764  4898666678999887764 43


Q ss_pred             cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +..   ...+.++.+       +.+....+++.++++.+..+++.+++++..+.+.+.++++.
T Consensus       273 ~~l---~~~~~~~~~-------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~  325 (395)
T 1vef_A          273 RSM---PKGGHGTTF-------GGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP  325 (395)
T ss_dssp             HTS---CTTSSCCSS-------TTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC
T ss_pred             hhh---ccCCcCCCc-------CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence            321   111112111       12233345566677777666678888888888887777654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.82  E-value=1.6e-19  Score=178.98  Aligned_cols=161  Identities=18%  Similarity=0.167  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHI  252 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~v  252 (435)
                      ..++++.+++++|.+  +++++++| ++|+.++++++..+++.        |++++++|++....    ++..|++++.+
T Consensus        54 ~~~l~~~la~~~~~~--~~i~~~sG-t~a~~~~~~~~~~~g~~--------vl~~~~~~~~~~~~~~~~~~~~g~~~~~~  122 (386)
T 1cs1_A           54 RDVVQRALAELEGGA--GAVLTNTG-MSAIHLVTTVFLKPGDL--------LVAPHDCYGGSYRLFDSLAKRGCYRVLFV  122 (386)
T ss_dssp             HHHHHHHHHHHHTCS--EEEEESSH-HHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             HHHHHHHHHHHhCCC--cEEEeCCH-HHHHHHHHHHHhCCCCE--------EEEecCCcHhHHHHHHHHHHhcCCEEEEe
Confidence            445566777777765  35666555 99999999998655554        99999999985543    46679999999


Q ss_pred             ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      |.+     |++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+++...         .+.   
T Consensus       123 ~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~---------~~~---  185 (386)
T 1cs1_A          123 DQG-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ---------NPL---  185 (386)
T ss_dssp             CTT-----CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC---------CGG---
T ss_pred             CCC-----CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC---------Ccc---
Confidence            863     899999999999999999999999999999999999999999999999999877541         122   


Q ss_pred             CCCccEEEecCCCCCCccCCc--EEEEEeCCcccc
Q psy10210        333 LPGVTSISVDTHKYGFTPKGS--SVVLYRDLKYKH  365 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~g~--g~il~~~~~~~~  365 (435)
                      ..++|+++.|+||++.+|.+.  |+++.+++++.+
T Consensus       186 ~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~  220 (386)
T 1cs1_A          186 ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT  220 (386)
T ss_dssp             GGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH
T ss_pred             ccCceEEEEcCcccccCCCCceeEEEEeCcHHHHH
Confidence            246899999999997667653  887766545543

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.82  E-value=3.9e-20  Score=184.07  Aligned_cols=228  Identities=16%  Similarity=0.124  Sum_probs=151.8

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH-H--HHHcC--
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK-A--ANYFG--  246 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~-~--~~~~g--  246 (435)
                      ...+++.++++++++++|.++  ..+++++|++|+.++++++.++++.        |++++++|+++.. .  +...|  
T Consensus        66 ~~~~l~~~~r~~la~~~g~~~--~~i~~~sGt~a~~~a~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~g~~  135 (405)
T 2vi8_A           66 YVDIVEELARERAKQLFGAEH--ANVQPHSGAQANMAVYFTVLEHGDT--------VLGMNLSHGGHLTHGSPVNFSGVQ  135 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHCCTTCE--------EEEECGGGTCCTTTTCTTSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCc--eEEEecCcHHHHHHHHHHhcCCCCE--------EEEecccccchhcccchhhhccce
Confidence            455677778889999998864  3344445599999999998766655        9999999988643 1  12333  


Q ss_pred             CEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        247 MKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       247 ~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .+++.++++ .++.+|++++++++++ ++++|+++ ++| .|...++++|.++|++||+++|+|++|+.+....    +.
T Consensus       136 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~-~~~-~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~----~~  209 (405)
T 2vi8_A          136 YNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAA-AAA-YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA----GL  209 (405)
T ss_dssp             SEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC-CSS-CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT----TS
T ss_pred             eEEEecccccccCCcCHHHHHHHHHhcCCeEEEEe-CCC-CCccCCHHHHHHHHHHcCCEEEEEcccccccccc----Cc
Confidence            478888876 5788999999999986 88888874 444 3566789999999999999999999998544321    11


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                        .+...  .++|+++.|+||++.+|.| |+++.+ +++.+........+.   +      ++.+...++++.+++..+.
T Consensus       210 --~~~~~--~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~l~~~~~~~~---~------~~~~~~~~aa~~~al~~~~  274 (405)
T 2vi8_A          210 --HPNPV--PYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQIDKAIFPGI---Q------GGPLMHVIAAKAVAFGEAL  274 (405)
T ss_dssp             --SCCST--TTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHHHHHHHTTTT---C------SSCCHHHHHHHHHHHHHHH
T ss_pred             --CCCcc--ccCCEEEEeccccCCCCCC-eEEEEc-HHHHHHHHhhhcccc---c------CCCCHHHHHHHHHHHHHHH
Confidence              11111  2578999999999666888 886655 555433211111111   1      2223334445555665543


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210        405 ---FEAQVWICVRYHFNYKSCLQNLSDLWL  431 (435)
Q Consensus       405 ---~~g~~~~~~~~~~~~~~~~~~l~~l~~  431 (435)
                         .+...++.++..+.+.+.++++ ++..
T Consensus       275 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  303 (405)
T 2vi8_A          275 QDDFKAYAKRVVDNAKRLASALQNE-GFTL  303 (405)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence               3555666666666666666665 4443

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.82  E-value=4.1e-20  Score=183.44  Aligned_cols=198  Identities=16%  Similarity=0.124  Sum_probs=143.0

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      .+++++.+.+.+.+...      ....|....|.+++++++++++....                             .+
T Consensus        44 ~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~lr~~la~~~~~~~-----------------------------~~   88 (394)
T 2ay1_A           44 PIMRAVHAAEQRMLETE------TTKTYAGLSGEPEFQKAMGELILGDG-----------------------------LK   88 (394)
T ss_dssp             CCCHHHHHHHHHHHHHC------CCCCCCCSSCCHHHHHHHHHHHHGGG-----------------------------CC
T ss_pred             cCcHHHHHHHHHhcCCc------ccCCCCCCCCcHHHHHHHHHHHhCCC-----------------------------CC
Confidence            34567777777665431      12234445567888888887763210                             11


Q ss_pred             CCCceEE--cCChHHHHHHHHHHHHH--HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHH
Q psy10210        192 PETCGCM--TSGGTESIMMACKAYRD--YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAAL  265 (435)
Q Consensus       192 ~~~~~~~--t~ggteai~~a~~a~~~--~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l  265 (435)
                      + +++++  |+||++|+.+++++++.  +++.        |++++|+|+++...++..|++++.+|.+  +++.+|++++
T Consensus        89 ~-~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  159 (394)
T 2ay1_A           89 S-ETTATLATVGGTGALRQALELARMANPDLR--------VFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGM  159 (394)
T ss_dssp             G-GGEEEEEEEHHHHHHHHHHHHHHHHCTTCC--------EEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHH
T ss_pred             c-ccEEEEecCCchhHHHHHHHHHHhcCCCCE--------EEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHH
Confidence            2 37888  99999999999998875  5555        9999999999999999999999999985  5678999999


Q ss_pred             HHHhhc---CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCCCCc-c
Q psy10210        266 QSAITG---NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGV-T  337 (435)
Q Consensus       266 ~~~i~~---~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gv-d  337 (435)
                      ++++++   +++++++++|+||||.+   +++++|.++|++||+++|+|++|+++...-. .   ...++. +...+. +
T Consensus       160 ~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~---~~~~~~~~~~~~~~~  235 (394)
T 2ay1_A          160 KADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLE-E---DAAGTRLIASRIPEV  235 (394)
T ss_dssp             HHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHH-H---HHHHHHHHHHHCSSE
T ss_pred             HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcc-c---chHHHHHHhhcCCCE
Confidence            999975   36788889999999998   4678899999999999999999998754100 0   000111 111122 4


Q ss_pred             EEEecCCCCCCcc--CCcEEEEE
Q psy10210        338 SISVDTHKYGFTP--KGSSVVLY  358 (435)
Q Consensus       338 ~~~~s~hK~~~~p--~g~g~il~  358 (435)
                      +++.|++|.+ ++  .++|+++.
T Consensus       236 i~~~s~sK~~-~~~G~riG~~~~  257 (394)
T 2ay1_A          236 LIAASCSKNF-GIYRERTGCLLA  257 (394)
T ss_dssp             EEEEECTTTT-TCGGGCEEEEEE
T ss_pred             EEEEeccCCC-cCcCCccceEEE
Confidence            5677899984 54  44699776

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.82  E-value=2.3e-19  Score=178.22  Aligned_cols=162  Identities=17%  Similarity=0.137  Sum_probs=131.0

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~  251 (435)
                      ...++++.+++++|.+   +.+++++|++|+.++++++.++++.        |+++++.|+++...    ++..|++++.
T Consensus        60 ~~~~l~~~la~~~g~~---~~i~~~sG~~ai~~~~~~~~~~gd~--------vl~~~~~y~~~~~~~~~~~~~~g~~~~~  128 (389)
T 3acz_A           60 TVEQFEEMVCSIEGAA---GSAAFGSGMGAISSSTLAFLQKGDH--------LIAGDTLYGCTVSLFTHWLPRFGIEVDL  128 (389)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHTTTCCTTCE--------EEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHHhCCCCE--------EEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence            3455666788888775   4567777899999999987655555        99999999987665    5778999999


Q ss_pred             EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      +|.     .|++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+..      +   .+++ 
T Consensus       129 v~~-----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~------~---~~~~-  193 (389)
T 3acz_A          129 IDT-----SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCF------L---KPLE-  193 (389)
T ss_dssp             ECT-----TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT------C---CGGG-
T ss_pred             ECC-----CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc------c---Cccc-
Confidence            986     389999999999999999999999999999999999999999999999999987643      1   1333 


Q ss_pred             CCCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        332 SLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                        .++|+++.|+||++++|.+  .|+++.+++++.+
T Consensus       194 --~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~  227 (389)
T 3acz_A          194 --LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIA  227 (389)
T ss_dssp             --TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH
T ss_pred             --cCCeEEEECChhhccCCCCceeEEEEECcHHHHH
Confidence              4789999999998777765  5886665425543

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.82  E-value=1.1e-19  Score=185.01  Aligned_cols=170  Identities=12%  Similarity=0.122  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHhCCCCCC--ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH--------HH
Q psy10210        173 VCKMEAEVIKMCARMFNGGPET--CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK--------AA  242 (435)
Q Consensus       173 ~~~~e~~~~~~la~l~g~~~~~--~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~--------~~  242 (435)
                      ..++|..+++++++++|.+.+.  ..+++++||+|+..++.++.+++|.        |+++++.|.++..        .+
T Consensus        98 ~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~--------Vl~~~~~h~g~l~h~~~~~~~~i  169 (490)
T 2a7v_A           98 VDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR--------IMGLDLPDGGHLTHGYMSDVKRI  169 (490)
T ss_dssp             CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEE--------CCC--------------------
T ss_pred             HHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCE--------ecccCccccccccchhhhcchhH
Confidence            4578888889999999997642  2356678999999999999888887        9999998865321        23


Q ss_pred             HHcCCEEEEE--ecC-CCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhc
Q psy10210        243 NYFGMKVKHI--RLT-SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPF  318 (435)
Q Consensus       243 ~~~g~~v~~v--p~~-~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~  318 (435)
                      ...|..+..+  +++ +++.+|++++++++. .++++|+++.++||  ...|+++|.++|++||+++|+|++++..+.. 
T Consensus       170 ~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~-  246 (490)
T 2a7v_A          170 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVA-  246 (490)
T ss_dssp             -----------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHH-
T ss_pred             HHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEcccccccccc-
Confidence            3456544444  445 578999999999986 47889988888876  4678999999999999999999998654332 


Q ss_pred             ccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        319 MSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       319 ~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                         .|..  +..+  .++|+++.++||++.||.| |+++.+++
T Consensus       247 ---~g~~--~~~~--~~aDiv~~S~hK~l~Gp~G-G~i~~~~~  281 (490)
T 2a7v_A          247 ---AKVI--PSPF--KHADIVTTTTHKTLRGARS-GLIFYRKG  281 (490)
T ss_dssp             ---TTSS--CCGG--GTCSEEEEESSGGGCSCSC-EEEEEECS
T ss_pred             ---CCcC--CCCC--CCCCEEEECCcccCccccc-hheeeccc
Confidence               1221  2222  2689999999998778877 88787764

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.82  E-value=2.2e-19  Score=178.44  Aligned_cols=244  Identities=12%  Similarity=0.029  Sum_probs=164.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+........    .+  ..+...++++.+++++|.   +++++|+||++|+.+++++++.....  +.+
T Consensus        58 ~~~v~~a~~~~~~~~~~~~~----~~--~~~~~~~l~~~la~~~g~---~~v~~~~gg~~a~~~al~~~~~~~~~--~~~  126 (397)
T 2ord_A           58 HPRLVEAIKDQAEKLIHCSN----LF--WNRPQMELAELLSKNTFG---GKVFFANTGTEANEAAIKIARKYGKK--KSE  126 (397)
T ss_dssp             CHHHHHHHHHHHHHCSCCCT----TS--EEHHHHHHHHHHHHTTTS---CEEEEESSHHHHHHHHHHHHHHHHHH--HCT
T ss_pred             CHHHHHHHHHHHHhcccCcc----cc--CCHHHHHHHHHHHHhcCC---CeEEEeCCHHHHHHHHHHHHHHHhhc--CCC
Confidence            68899999888876422111    11  235566778888888873   38999999999999999988652110  001


Q ss_pred             -CCeEEEeCCCchh-HHHHHHHcCCE------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccc-c-
Q psy10210        225 -LPEIVLPTTAHPA-FDKAANYFGMK------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGT-M-  288 (435)
Q Consensus       225 -~~~viv~~~~~~~-~~~~~~~~g~~------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~-~-  288 (435)
                       +++|+++++.|++ +..+++..|.+            ++.+|.+     |++++++++++++++|++++|+||||. + 
T Consensus       127 ~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~nptG~~~~  201 (397)
T 2ord_A          127 KKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSEDVCAVFLEPIQGESGIVPA  201 (397)
T ss_dssp             TCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTTEEEEEECSEECTTTCEEC
T ss_pred             CCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcCeEEEEEecccCCCCcccC
Confidence             2358888888766 44477777776            7777752     899999999889999999999999999 3 


Q ss_pred             --cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC--CCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        289 --DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       289 --~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                        +++++|.++|++||+++|+|++|+++...     |.   ++.+.  ....|++++  +|++.++.++|+++.+++ +.
T Consensus       202 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~-----g~---~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~-~~  270 (397)
T 2ord_A          202 TKEFLEEARKLCDEYDALLVFDEVQCGMGRT-----GK---LFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIVNER-AN  270 (397)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----SS---SSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECST-TC
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEecccCCccC-----cc---chhhhhhCCCCCeeee--ccccCCCcCeEEEEEchH-hc
Confidence              78999999999999999999999875321     11   12111  112576655  698655567899777654 33


Q ss_pred             cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       ..   .....+..     .  +.+....+++.++++.+..+...++.++..+.+.+.++++
T Consensus       271 -~l---~~~~~~~~-----~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~  321 (397)
T 2ord_A          271 -VL---EPGDHGTT-----F--GGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEM  321 (397)
T ss_dssp             -CC---CTTSSCCS-----S--TTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             -cc---CCCCcCCC-----C--CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence             21   11111111     1  2223334556667777665667777777777777666554

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.82  E-value=5e-20  Score=184.07  Aligned_cols=201  Identities=10%  Similarity=-0.051  Sum_probs=141.2

Q ss_pred             CCHHHHHHHHHH-HHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210        112 RNRLEILELVSN-YLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       112 ~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      ..++.+.+.+.+ .+...      ....|....|.+++++++++++...... .                         .
T Consensus        47 ~~~~~v~~a~~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~-~-------------------------~   94 (412)
T 1yaa_A           47 WVLPSVKAAEKLIHNDSS------YNHEYLGITGLPSLTSNAAKIIFGTQSD-A-------------------------L   94 (412)
T ss_dssp             CCCHHHHHHHHHHHTCTT------CCCCCCCTTCCHHHHHHHHHHHHCTTCH-H-------------------------H
T ss_pred             CCcHHHHHHHHhhhcCcc------cccCCCCCCCcHHHHHHHHHHHhcCCCC-C-------------------------C
Confidence            345677777777 65421      1223445567888888888877542110 0                         1


Q ss_pred             CCCCceEE--cCChHHHHHHHHHHH--HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-C-CCccccHHH
Q psy10210        191 GPETCGCM--TSGGTESIMMACKAY--RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-T-SSYTVDLAA  264 (435)
Q Consensus       191 ~~~~~~~~--t~ggteai~~a~~a~--~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~-~~~~~d~~~  264 (435)
                      ++ +++++  |+||++|+.++++.+  ..+++.        |++++|+|+++...++..|++++.+|. + +++.+|+++
T Consensus        95 ~~-~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~--------Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  165 (412)
T 1yaa_A           95 QE-DRVISVQSLSGTGALHISAKFFSKFFPDKL--------VYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNG  165 (412)
T ss_dssp             HT-TCEEEEEEEHHHHHHHHHHHHHHHHCTTCC--------EEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHH
T ss_pred             Cc-ceEEEEeccchHhHHHHHHHHHHHhCCCCE--------EEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHH
Confidence            23 37999  999999999985443  335554        999999999999999999999999998 4 467899999


Q ss_pred             HHHHhhcC---ceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCC--
Q psy10210        265 LQSAITGN---TVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPG--  335 (435)
Q Consensus       265 l~~~i~~~---~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~g--  335 (435)
                      ++++++++   +.++++++|+||||.+   +++++|.++|++||+++|+|++|+++...-...   ...++ ++...+  
T Consensus       166 l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~---~~~~~~~~~~~~~~  242 (412)
T 1yaa_A          166 FLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDK---DAYAVRLGVEKLST  242 (412)
T ss_dssp             HHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHH---HTHHHHHHHHHTTT
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccc---hhHHHHHHHhcCCC
Confidence            99999753   4566669999999998   568889999999999999999998775410000   00011 111112  


Q ss_pred             --ccEEEecCCCCCCccCC--cEEEE
Q psy10210        336 --VTSISVDTHKYGFTPKG--SSVVL  357 (435)
Q Consensus       336 --vd~~~~s~hK~~~~p~g--~g~il  357 (435)
                        .++++.|++|. ++|.|  +|+++
T Consensus       243 ~~~~i~~~s~sK~-~~~~GlriG~~~  267 (412)
T 1yaa_A          243 VSPVFVCQSFAKN-AGMYGERVGCFH  267 (412)
T ss_dssp             TCCEEEEEECTTT-SCCGGGCEEEEE
T ss_pred             CcceEEEeccCCC-CCCcCCcceEEE
Confidence              35677889998 46655  68866

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.82  E-value=3.6e-19  Score=177.60  Aligned_cols=221  Identities=9%  Similarity=0.036  Sum_probs=155.0

Q ss_pred             CCccccCCC-C--C-CCCHHHHHHHHHHHH-hCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHH
Q psy10210        100 GLEYFLELP-S--Q-GRNRLEILELVSNYL-ARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVC  174 (435)
Q Consensus       100 ~~~~~~~~P-~--~-~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~  174 (435)
                      .+++..|.| +  . ...++.+.+... .. ..      .....|.+..|.+++++++++++...... ..         
T Consensus        31 ~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~------~~~~~Y~~~~G~~~lr~aia~~~~~~~~~-~~---------   93 (405)
T 3k7y_A           31 KINLSIGVCCNDDGDLHIFDSVLNADK-LVTEN------YKEKPYLLGNGTEDFSTLTQNLIFGNNSK-YI---------   93 (405)
T ss_dssp             CEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHH------CCCCCCCTTSSCHHHHHHHHHHHHCSSCT-TT---------
T ss_pred             cEEeeeeeeECCCCCCcccHHHHHHHH-HhcCC------CCCCCCCCCCCcHHHHHHHHHHHcCCCCc-cc---------
Confidence            456666653 2  1 134566666655 33 22      22456778889999999999998643211 11         


Q ss_pred             HHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHH--HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEE
Q psy10210        175 KMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRD--YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH  251 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~--~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~  251 (435)
                                      +++. ++++|+|+++|+.+++.++.+  + |.        |++++|+|+.+...++..|++++.
T Consensus        94 ----------------~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~--------Vlv~~P~y~~~~~~~~~~g~~~~~  148 (405)
T 3k7y_A           94 ----------------EDKKICTIQCIGGTGAIFVLLEFLKMLNV-ET--------LYVTNPPYINHVNMIESRGFNLKY  148 (405)
T ss_dssp             ----------------TTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CE--------EEEESSCCHHHHHHHHTTTCEEEE
T ss_pred             ----------------cccceEEEEcCchHHHHHHHHHHHHhcCC-CE--------EEEeCCCCHhHHHHHHHcCCeEEE
Confidence                            2221 469999999999999999887  6 66        999999999999999999999999


Q ss_pred             Eec-C-CCccccHHHHHHHhhc--CceEEEEeCC-CCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        252 IRL-T-SSYTVDLAALQSAITG--NTVMLVGSMP-NFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       252 vp~-~-~~~~~d~~~l~~~i~~--~~~~v~~~~p-~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      +|+ + +++.+|++++++++.+  +++++++++| |||||.+   +.+++|+++|++|++++++|++|.++...-.....
T Consensus       149 v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~  228 (405)
T 3k7y_A          149 INFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDV  228 (405)
T ss_dssp             ECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGG
T ss_pred             EeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccch
Confidence            998 3 3588999999999974  5678888765 8999999   77889999999999999999999987641000000


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEEE--eCCcc
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVLY--RDLKY  363 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~--~~~~~  363 (435)
                      .....+. ....-.+++.|+.|... .+..+|+++.  .++++
T Consensus       229 ~~~~~~~-~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~  270 (405)
T 3k7y_A          229 LLIRKFE-EKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEE  270 (405)
T ss_dssp             HHHHHHH-TTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHH
T ss_pred             HHHHHHH-hcCCcEEEEeeCCccCCCccccceEEEEEeCCHHH
Confidence            0000010 11123466678999843 4577899754  34444

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.82  E-value=1.5e-19  Score=181.16  Aligned_cols=224  Identities=10%  Similarity=-0.014  Sum_probs=151.4

Q ss_pred             CCccccCCCCCC--CCHHHHHHHHH--HHHhCCCCCCCCCcccc-cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHH
Q psy10210        100 GLEYFLELPSQG--RNRLEILELVS--NYLARGHYDWKHGRVSG-AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVC  174 (435)
Q Consensus       100 ~~~~~~~~P~~~--~~~~~i~~~~~--~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~  174 (435)
                      .+++..+.|+..  +.++++.+.+.  +.+. ..    .....| ....|.+++++++++++.                 
T Consensus        27 ~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~-~~----~~~~~Yp~~~~g~~~lr~~ia~~~~-----------------   84 (423)
T 3ez1_A           27 NLNMQRGQPADADFDLSNGLLTVLGAEDVRM-DG----LDLRNYPGGVAGLPSARALFAGYLD-----------------   84 (423)
T ss_dssp             CEESCCCCCCHHHHHTTGGGGGSCCGGGCEE-TT----EETTSSCSCTTCCHHHHHHHHHHTT-----------------
T ss_pred             eEecCCCCCChHhCCCcHHHHHHHhhhHHhh-cc----hhhhCCCCCCCChHHHHHHHHHHhC-----------------
Confidence            356666777621  23344555543  3222 11    112345 455677888888877652                 


Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHH--HHHHHHHH--Hhhhhc-CCCCCeEEEeCCCchhHHHHHHHcCCEE
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIM--MACKAYRD--YAREEK-GISLPEIVLPTTAHPAFDKAANYFGMKV  249 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~--~a~~a~~~--~~~~~~-g~~~~~viv~~~~~~~~~~~~~~~g~~v  249 (435)
                                     .+++ ++++|+|+++++.  ++++++.+  +++.+. ...+++|++++|+|+.+...++..|+++
T Consensus        85 ---------------~~~~-~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~  148 (423)
T 3ez1_A           85 ---------------VKAE-NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFEL  148 (423)
T ss_dssp             ---------------SCGG-GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEE
T ss_pred             ---------------CChh-hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEE
Confidence                           2333 8999999999998  88888876  531000 0002359999999999999999999999


Q ss_pred             EEEecCCCccccHHHHHHHh--hcCceEEEEe-CCCCCcccccC---HHHHHHHH-HHcCCcEEEeccccchhhhccccc
Q psy10210        250 KHIRLTSSYTVDLAALQSAI--TGNTVMLVGS-MPNFPYGTMDD---IGAIAKLG-EKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       250 ~~vp~~~~~~~d~~~l~~~i--~~~~~~v~~~-~p~nptG~~~~---i~~i~~la-~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      +.+|+++++ +|++++++++  ++++++|++. +|+||||.+-+   +++|+++| ++||+++|+|++|+.+.+..  ..
T Consensus       149 ~~v~~~~~g-~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~--~~  225 (423)
T 3ez1_A          149 LTVDMQSDG-PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVE--ED  225 (423)
T ss_dssp             EEEEEETTE-ECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCS--SS
T ss_pred             EeccCCCCC-CCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCC--CC
Confidence            999998665 9999999999  4688888754 89999999955   55889999 99999999999998543310  00


Q ss_pred             CCCCCC-CCC----CCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        323 GYPLPP-FDF----SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       323 g~~~~~-~d~----~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      +....+ +.+    ...+.+++..|++|+++++.++|+++.+ +++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~-~~~~~  272 (423)
T 3ez1_A          226 RAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASS-EDNIR  272 (423)
T ss_dssp             CCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEEC-HHHHH
T ss_pred             CCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeC-HHHHH
Confidence            000001 111    2345678888999986666889986654 44443

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.81  E-value=4.1e-20  Score=183.46  Aligned_cols=201  Identities=13%  Similarity=0.096  Sum_probs=145.4

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      ..++++.+.+.+.+...      ....|....|.+++++++++++...... +                         .+
T Consensus        44 ~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~lr~~la~~~~~~~~~-~-------------------------~~   91 (396)
T 2q7w_A           44 PVLTSVKKAEQYLLENE------TTKNYLGIDGIPEFGRCTQELLFGKGSA-L-------------------------IN   91 (396)
T ss_dssp             CCCHHHHHHHHHHHHHC------CCCCCCCTTCCHHHHHHHHHHHHCTTCH-H-------------------------HH
T ss_pred             cCcHHHHHHHHhhcCcc------cccCCCCCCCCHHHHHHHHHHHhcCCCC-c-------------------------cc
Confidence            34567777777765432      1223445567888888888887542100 0                         01


Q ss_pred             CCCceEE--cCChHHHHHHHHHHHHH--HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHH
Q psy10210        192 PETCGCM--TSGGTESIMMACKAYRD--YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAAL  265 (435)
Q Consensus       192 ~~~~~~~--t~ggteai~~a~~a~~~--~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l  265 (435)
                      + +++++  |+||++|+.++++++..  +++        +|++++|+|+++...++..|++++.+|.+  +++.+|++++
T Consensus        92 ~-~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--------~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  162 (396)
T 2q7w_A           92 D-KRARTAQTPGGTGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDAL  162 (396)
T ss_dssp             T-TCEEEEEESHHHHHHHHHHHHHHHHSCCC--------EEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHH
T ss_pred             c-ccEEEEecccchhhHHHHHHHHHHhCCCC--------EEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHH
Confidence            2 37887  99999999999987753  444        49999999999999999999999999985  5678999999


Q ss_pred             HHHhhc---CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCC-CCcc
Q psy10210        266 QSAITG---NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSL-PGVT  337 (435)
Q Consensus       266 ~~~i~~---~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~-~gvd  337 (435)
                      ++++++   +++++++++|+||||.+   +++++|.++|++||+++|+|++|+++...-. ...   .++. +.. ...+
T Consensus       163 ~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~---~~~~~~~~~~~~~  238 (396)
T 2q7w_A          163 INSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE-EDA---EGLRAFAAMHKEL  238 (396)
T ss_dssp             HHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH-HHT---HHHHHHHHHCSCE
T ss_pred             HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc-chh---HHHHHHHhcCCcE
Confidence            999975   47888899999999998   5678999999999999999999988754100 000   0111 111 1245


Q ss_pred             EEEecCCCCCCccCC--cEEEEE
Q psy10210        338 SISVDTHKYGFTPKG--SSVVLY  358 (435)
Q Consensus       338 ~~~~s~hK~~~~p~g--~g~il~  358 (435)
                      +++.|++|. +++.|  +|+++.
T Consensus       239 i~~~s~sK~-~~~~G~riG~~~~  260 (396)
T 2q7w_A          239 IVASSYSXN-FGLYNERVGACTL  260 (396)
T ss_dssp             EEEEECTTT-TTCGGGCCEEEEE
T ss_pred             EEEEecccc-ccccccccceEEE
Confidence            778899998 45444  699776

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.81  E-value=6.7e-20  Score=189.49  Aligned_cols=174  Identities=15%  Similarity=0.176  Sum_probs=133.9

Q ss_pred             hHHHHHHHHHHHHHHHhC----CCCCCceEEcCChHHHHHHHHHHH-----HHHhhhhcCCCCCeEEEeCCCchhHHHHH
Q psy10210        172 GVCKMEAEVIKMCARMFN----GGPETCGCMTSGGTESIMMACKAY-----RDYAREEKGISLPEIVLPTTAHPAFDKAA  242 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g----~~~~~~~~~t~ggteai~~a~~a~-----~~~~~~~~g~~~~~viv~~~~~~~~~~~~  242 (435)
                      +..+++..+.+++.+.++    ..+++++++|+|+|+|+.+++.++     .++++        +|++++|+|+++...+
T Consensus       139 g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd--------~Viv~~p~~~~~~~~~  210 (533)
T 3f6t_A          139 CLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGD--------KIAINEPIFTPYLRIP  210 (533)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTC--------EEEEESSCCHHHHTSG
T ss_pred             cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcC--------EEEEcCCCcHHHHHHH
Confidence            445555555555554422    122358999999999999999983     44444        4999999999999999


Q ss_pred             HHcCCEEEEEecC----CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHH-HcCCcEEEeccccch
Q psy10210        243 NYFGMKVKHIRLT----SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGE-KYGIPVHVDCCLGGF  314 (435)
Q Consensus       243 ~~~g~~v~~vp~~----~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~-~~~~~livD~~~~~~  314 (435)
                      +..|++++.+|++    .++.+|++++++++++++++|++++|+||||.+   +++++|+++|+ +||+++|+|++|+++
T Consensus       211 ~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~  290 (533)
T 3f6t_A          211 ELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAF  290 (533)
T ss_dssp             GGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGG
T ss_pred             HHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcccc
Confidence            9999999999985    457899999999999999999999999999999   45568889998 689999999999987


Q ss_pred             hhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCc
Q psy10210        315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLK  362 (435)
Q Consensus       315 ~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~  362 (435)
                      ...+        .++.....+.++++.|++|. +++.|  +|+++.+++.
T Consensus       291 ~~~~--------~~~~~~~~~~~i~~~S~SK~-~g~~G~RiG~l~~~~~~  331 (533)
T 3f6t_A          291 VPNF--------KSIYSVVPYNTMLVYSYSKL-FGCTGWRLGVIALNEKN  331 (533)
T ss_dssp             STTC--------CCHHHHSGGGEEEEEESHHH-HTCGGGCEEEEEEESSC
T ss_pred             ccCc--------cCHhhcCCCCEEEEecCccc-CCCcccceEEEEECcHH
Confidence            5421        12211223467888999998 45445  8997777763

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.81  E-value=5.8e-20  Score=184.75  Aligned_cols=187  Identities=14%  Similarity=0.083  Sum_probs=142.8

Q ss_pred             cccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCc---eEEcCChHHHHHHHHHHHH
Q psy10210        138 SGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC---GCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       138 ~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~---~~~t~ggteai~~a~~a~~  214 (435)
                      .|....|.+++++++++++.... .                          +.++ ++   +++|+|+++|+.++++++.
T Consensus        83 ~y~~~~g~~~lr~~ia~~~~~~~-~--------------------------~~~~-~~~~~i~~t~g~~~al~~~~~~l~  134 (430)
T 2x5f_A           83 PYAPPQGIEELRDLWQQKMLRDN-P--------------------------ELSI-DNMSRPIVTNALTHGLSLVGDLFV  134 (430)
T ss_dssp             SCCCTTCCHHHHHHHHHHHHHHC-T--------------------------TCCG-GGBCCCEEESHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCHHHHHHHHHHHhccC-c--------------------------ccCC-CccceEEEcCCchHHHHHHHHHHh
Confidence            44445567888888888776542 1                          1233 36   9999999999999999997


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cCCEEEEEecCC-CccccHHHHHHHhhc---CceEEEEeCCCCCccccc
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANY-FGMKVKHIRLTS-SYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMD  289 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g~~v~~vp~~~-~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~  289 (435)
                      ++++.        |++++|+|+++...++. .|++++.+|+++ ++.+|++++++++++   +++++++++|+||||.+-
T Consensus       135 ~~gd~--------Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~  206 (430)
T 2x5f_A          135 NQDDT--------ILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP  206 (430)
T ss_dssp             CTTCE--------EEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred             CCCCE--------EEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence            76665        99999999999999999 999999999874 467999999999987   889999999999999995


Q ss_pred             C---HHHHHHHHHH-----cCCcEEEeccccchhhhcccccCCCCCCC--CCCC-CCc---cEEEecCCCCCC-ccCCcE
Q psy10210        290 D---IGAIAKLGEK-----YGIPVHVDCCLGGFLAPFMSAAGYPLPPF--DFSL-PGV---TSISVDTHKYGF-TPKGSS  354 (435)
Q Consensus       290 ~---i~~i~~la~~-----~~~~livD~~~~~~~~~~~~~~g~~~~~~--d~~~-~gv---d~~~~s~hK~~~-~p~g~g  354 (435)
                      +   +++|.++|++     ||+++|+|++|+++.+.     |.+..++  ++.. .+.   +++..|+||++. ++.++|
T Consensus       207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG  281 (430)
T 2x5f_A          207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYE-----DVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVG  281 (430)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCS-----SSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCE
T ss_pred             CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCC-----cccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeE
Confidence            5   9999999999     99999999999987542     1111121  2211 334   677889999853 223479


Q ss_pred             EEEE--eCCcccc
Q psy10210        355 VVLY--RDLKYKH  365 (435)
Q Consensus       355 ~il~--~~~~~~~  365 (435)
                      +++.  +++++.+
T Consensus       282 ~~~~~~~~~~~~~  294 (430)
T 2x5f_A          282 FMTFGTSDQTTKE  294 (430)
T ss_dssp             EEEEBCCCHHHHH
T ss_pred             EEEEecCCHHHHH
Confidence            9776  2555543

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.81  E-value=3.4e-19  Score=179.15  Aligned_cols=168  Identities=18%  Similarity=0.221  Sum_probs=128.8

Q ss_pred             HHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchhHHHHHH----------H
Q psy10210        177 EAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPAFDKAAN----------Y  244 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~~~~~~~----------~  244 (435)
                      ..++++.+++++|.+... ++++ ++||+|+..++.++.++++.        |++++ +.|.++...+.          .
T Consensus        67 ~~~l~~~la~~~g~~~~~~~i~~-~sGt~Ai~~al~al~~~Gd~--------Vl~~~~~~y~~~~~~~~l~g~~~~~~~~  137 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGLVRPQI-ISGTHAISTALFGILRPGDE--------LLYITGKPYDTLEEIVGVRGKGVGSFKE  137 (431)
T ss_dssp             HHHHHHHHHHHTTCSEECCBTTS-CSHHHHHHHHHHTTCCTTCE--------EEECSSSCCTTHHHHTTSSSCSSSCSGG
T ss_pred             HHHHHHHHHHHhCCCccccccee-eCHHHHHHHHHHHhCCCCCE--------EEEeCCCCchhHHHHHhhcccccchHHH
Confidence            445566777777775431 1224 47799999999988777766        99998 99999886653          4


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeC-CCCCccc---ccCHHHHHHHHHH--cCCcEEEeccccchhhhc
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSM-PNFPYGT---MDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPF  318 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~-p~nptG~---~~~i~~i~~la~~--~~~~livD~~~~~~~~~~  318 (435)
                      .|++++.+|.++++.+|+++++++++++|++|++++ |+||+|.   .+++++|.++|++  +|+++++|++|+.+... 
T Consensus       138 ~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~-  216 (431)
T 3ht4_A          138 YNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEE-  216 (431)
T ss_dssp             GTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSS-
T ss_pred             cCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccC-
Confidence            799999999988899999999999999999999995 6655554   5889999999999  99999999999887541 


Q ss_pred             ccccCCCCCCCCCCCCCccEEEecCCCCCCc---cCCcEEEEEeCCccccc
Q psy10210        319 MSAAGYPLPPFDFSLPGVTSISVDTHKYGFT---PKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       319 ~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~---p~g~g~il~~~~~~~~~  366 (435)
                             ..+.   ..|+|+++.|+||++++   |.| |+++. ++++.+.
T Consensus       217 -------~~~~---~~g~Di~~~S~sK~lgg~~~~~G-G~v~~-~~~li~~  255 (431)
T 3ht4_A          217 -------QEPC---HVGADLMAGSLIKNPGGGIVKTG-GYIVG-KEQYVEA  255 (431)
T ss_dssp             -------CCGG---GTTCSEEEEETTSGGGTTTCSSC-EEEEE-CHHHHHH
T ss_pred             -------CCcc---ccCCeEEEcCccccCCCCCCCce-EEEEe-cHHHHHH
Confidence                   1122   23789999999998433   666 77555 4555443

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.81  E-value=1.5e-18  Score=172.23  Aligned_cols=153  Identities=16%  Similarity=0.210  Sum_probs=116.3

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-  223 (435)
                      .+++.+++.+.+....+.      ..    ....++++.+++++|.+   +++++++||+|+.+++.+++...  .++. 
T Consensus        14 ~~~~~~a~~~~~~~~~~~------~~----~~~~~l~~~la~~~~~~---~~i~~~sGt~a~~~al~~~~~~~--~~~~~   78 (390)
T 3b8x_A           14 DDLEYKAIQSVLDSKMFT------MG----EYVKQYETQFAKTFGSK---YAVMVSSGSTANLLMIAALFFTK--KPRLK   78 (390)
T ss_dssp             CHHHHHHHHHHHHHTCCS------SC----HHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHTTSSS--SCSCC
T ss_pred             CHHHHHHHHHHHHcCCCC------CC----hHHHHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHHHhhh--hcCCC
Confidence            455566666655542111      12    23345556777777764   57888888999999999873100  0011 


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC-ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS-YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG  302 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~-~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~  302 (435)
                      ++++|+++.++|+++..+++..|++++.+|++++ +.+|++++++++++++++|++++   ++|...++++|.++|++||
T Consensus        79 ~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~  155 (390)
T 3b8x_A           79 KGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGRD  155 (390)
T ss_dssp             TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTSC
T ss_pred             CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHcC
Confidence            2346999999999999999999999999999854 88999999999998999999874   5788899999999999999


Q ss_pred             CcEEEeccccchh
Q psy10210        303 IPVHVDCCLGGFL  315 (435)
Q Consensus       303 ~~livD~~~~~~~  315 (435)
                      +++|+|++|+.+.
T Consensus       156 ~~li~D~a~~~g~  168 (390)
T 3b8x_A          156 IILLEDNCESMGA  168 (390)
T ss_dssp             CEEEEECTTCTTC
T ss_pred             CEEEEECcCcccC
Confidence            9999999998543

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.81  E-value=4e-19  Score=176.85  Aligned_cols=246  Identities=14%  Similarity=0.019  Sum_probs=164.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+....+....    .  ..+...++++++++++|.+   ++++|+||++|+.+++++++..... +|.
T Consensus        56 ~~p~v~~a~~~~~~~~~~~~~~----~--~~~~~~~l~~~la~~~~~~---~v~~~~gg~~a~~~al~~~~~~~~~-~~~  125 (406)
T 4adb_A           56 AHPELREALNEQASKFWHTGNG----Y--TNEPVLRLAKKLIDATFAD---RVFFCNSGAEANEAALKLARKFAHD-RYG  125 (406)
T ss_dssp             TCHHHHHHHHHHHTTCSCCCTT----S--CCHHHHHHHHHHHHHSSCS---EEEEESSHHHHHHHHHHHHHHHHHH-HTC
T ss_pred             CCHHHHHHHHHHHHhcccccCC----c--CCHHHHHHHHHHHhhCCCC---eEEEeCcHHHHHHHHHHHHHHHHHh-cCC
Confidence            3788999998888763221111    1  1244667788899988653   8999999999999999998764322 222


Q ss_pred             C-CCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc-
Q psy10210        224 S-LPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-  288 (435)
Q Consensus       224 ~-~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-  288 (435)
                      + +++|++++|.|+++...+...+.             ++..+|.     .|++++++++++++++|+++ |+||+|.+ 
T Consensus       126 ~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~-p~np~g~~~  199 (406)
T 4adb_A          126 SHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDDSTCAVIVE-PIQGEGGVV  199 (406)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCSTTEEEEEEC-SEETTTTSE
T ss_pred             CCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcCCeEEEEEe-CCcCCCCCc
Confidence            2 35799999999887555544432             4444443     37999999999899999999 99999964 


Q ss_pred             ----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC--CCCCCccEEEecCCCCCCccCCcEEEEEeCCc
Q psy10210        289 ----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD--FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       289 ----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d--~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~  362 (435)
                          +++++|.++|++||+++|+|++|++|...     |   .++.  ......|++++  +|.+.++.++|+++. +++
T Consensus       200 ~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~-----g---~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~-~~~  268 (406)
T 4adb_A          200 PASNAFLQGLRELCNRHNALLIFDEVQTGVGRT-----G---ELYAYMHYGVTPDLLTT--AKALGGGFPVGALLA-TEE  268 (406)
T ss_dssp             ECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEE-CHH
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc-----c---hhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEE-cHH
Confidence                57999999999999999999999876331     1   1221  11223577765  798554456898555 445


Q ss_pred             cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        363 YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       363 ~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+..   .....++.+       +.+....+++.++++.+..+.+.++.++..+.+.+.++++
T Consensus       269 ~~~~~---~~~~~~~~~-------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~  322 (406)
T 4adb_A          269 CARVM---TVGTHGTTY-------GGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI  322 (406)
T ss_dssp             HHHTC---CTTSSCCSS-------TTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhh---ccCCcCCCC-------CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            44331   111112221       1222334556667777766788888888888777776654

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.81  E-value=3.4e-19  Score=178.44  Aligned_cols=164  Identities=16%  Similarity=0.137  Sum_probs=130.6

Q ss_pred             HHHHHHHHHhCCCCCCceEE---cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchhHH-----------HHHH
Q psy10210        179 EVIKMCARMFNGGPETCGCM---TSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPAFD-----------KAAN  243 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~---t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~~~-----------~~~~  243 (435)
                      ++++.+++++|.+.   .++   ++||++|+.+++.++.+++|.        |++++ +.|.++.           ..++
T Consensus        78 ~Le~~lA~l~g~e~---alv~p~~~sGt~A~~~al~all~pGD~--------Vl~~~~~~y~~~~~~~g~~~~~~~~~l~  146 (427)
T 3hvy_A           78 SLDRVYANIFNTES---AFVRPHFVNGTHAIGAALFGNLRPNDT--------MMSICGMPYDTLHDIIGMDDSKKVGSLR  146 (427)
T ss_dssp             HHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHTCCTTCE--------EEECSSSCCGGGHHHHTCCTTCCSCCTG
T ss_pred             HHHHHHHHHhCCCc---eEEeCCCCcHHHHHHHHHHHhcCCCCE--------EEEeCCCCchhHHHHhccccchhhhHHH
Confidence            44467788887753   355   889999999999999888877        99998 9998766           3445


Q ss_pred             HcCCEEEEEecCCCccccHHHHHHHhh--cCceEEEEeC----CCCCcccccCHHHHHHHHHH--cCCcEEEeccccchh
Q psy10210        244 YFGMKVKHIRLTSSYTVDLAALQSAIT--GNTVMLVGSM----PNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFL  315 (435)
Q Consensus       244 ~~g~~v~~vp~~~~~~~d~~~l~~~i~--~~~~~v~~~~----p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~  315 (435)
                      ..|++++.+|. +++.+|+++++++++  ++|++|++++    |+||+|.+.++++|.++|++  +|+++++|++|+.+.
T Consensus       147 ~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~  225 (427)
T 3hvy_A          147 EYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFV  225 (427)
T ss_dssp             GGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTT
T ss_pred             HcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccc
Confidence            67999999998 678899999999998  7999999999    99999999999999999999  899999999998765


Q ss_pred             hhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210        316 APFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP--KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       316 ~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p--~g~g~il~~~~~~~~~  366 (435)
                      ..        ..+.   ..|+|+++.|+||++.++  ...|+++ .++++.+.
T Consensus       226 ~~--------~~p~---~~gaDiv~~S~sK~lgg~g~~~GG~i~-~~~~li~~  266 (427)
T 3hvy_A          226 EE--------KEPT---DVGADIIAGSLIKNIGGGIATTGGYIA-GKEEYVTQ  266 (427)
T ss_dssp             SS--------SCGG---GGTCSEEEEETTSGGGTTTCCSCEEEE-ECHHHHHH
T ss_pred             cC--------CCCc---ccCCeEEEECCcccccccccceEEEEE-ECHHHHHH
Confidence            31        1122   247899999999995442  2236744 45665544

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.81  E-value=3.6e-19  Score=177.73  Aligned_cols=159  Identities=19%  Similarity=0.180  Sum_probs=127.4

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp  253 (435)
                      .++++.+++++|.+  +++++++ |++|+.++++ +.++++.        |+++++.|++....    ++..|++++.+|
T Consensus        70 ~~l~~~la~~~g~~--~~i~~~s-G~~ai~~~~~-l~~~gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~  137 (403)
T 3cog_A           70 NCLEKAVAALDGAK--YCLAFAS-GLAATVTITH-LLKAGDQ--------IICMDDVYGGTNRYFRQVASEFGLKISFVD  137 (403)
T ss_dssp             HHHHHHHHHHHTCS--EEEEESC-HHHHHHHHHT-TSCTTCE--------EEEESSCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             HHHHHHHHHHhCCC--cEEEECC-HHHHHHHHHH-HhCCCCE--------EEEeCCCcchHHHHHHHHHHHcCCEEEEEC
Confidence            45666777888775  3555554 5799999998 6655555        99999999985543    356799999998


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC-CcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG-IPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~-~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      .+     |++++++++++++++|++++|+||+|.+.++++|.++|++|| +++|+|++|+.+..      .   .+++  
T Consensus       138 ~~-----d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~------~---~~~~--  201 (403)
T 3cog_A          138 CS-----KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYF------Q---RPLA--  201 (403)
T ss_dssp             TT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTT------C---CTTT--
T ss_pred             CC-----CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccccc------C---Cccc--
Confidence            75     899999999999999999999999999999999999999999 99999999987643      1   1343  


Q ss_pred             CCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        333 LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                       .++|+++.|+||++.+|.+  .|+++.+++++.+
T Consensus       202 -~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~  235 (403)
T 3cog_A          202 -LGADISMYSATKYMNGHSDVVMGLVSVNCESLHN  235 (403)
T ss_dssp             -TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHH
T ss_pred             -cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHH
Confidence             4789999999999777765  4887776666544

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.81  E-value=8.9e-19  Score=173.99  Aligned_cols=246  Identities=16%  Similarity=0.054  Sum_probs=165.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+....+...      ....+...++++++++++|  . +++++|+||++|+..++++++..... +|.
T Consensus        53 ~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~l~~~la~~~~--~-~~v~~~~gg~ea~~~al~~~~~~~~~-~g~  122 (395)
T 3nx3_A           53 NHAKFNAKIKAQVDKLLHTSN------LYYNENIAAAAKNLAKASA--L-ERVFFTNSGTESIEGAMKTARKYAFN-KGV  122 (395)
T ss_dssp             SCHHHHHHHHHHHTTCSCCCT------TSBCHHHHHHHHHHHHHHT--C-SEEEEESSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             CCHHHHHHHHHHHHhcccccc------ccCCHHHHHHHHHHHHhcC--C-CeEEEeCCHHHHHHHHHHHHHHHhhc-cCC
Confidence            378999999988876432211      1123556677788888886  2 48999999999999999998766433 344


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-------------CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-------------GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD  290 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-------------g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~  290 (435)
                      ++++|++.++.|+++...+...             +.++..+|.+     |++++++++++++++|+++.++|++|.+.+
T Consensus       123 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~  197 (395)
T 3nx3_A          123 KGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEKTCAIILESVQGEGGINPA  197 (395)
T ss_dssp             TTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTTEEEEEEESEECTTSCEEC
T ss_pred             CCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCCeEEEEEeCccCCCCcccC
Confidence            4567999999998754433332             2355556542     799999999989999999999999999855


Q ss_pred             ----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC--CCCccEEEecCCCCCCccCCcEEEEEeCCcc-
Q psy10210        291 ----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--LPGVTSISVDTHKYGFTPKGSSVVLYRDLKY-  363 (435)
Q Consensus       291 ----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~-  363 (435)
                          +++|.++|++||+++|+||+|++|...     |   ..+...  ...+|++++|  |...++.++|+++.++ ++ 
T Consensus       198 ~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~-----g---~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~-~~~  266 (395)
T 3nx3_A          198 NKDFYKALRKLCDEKDILLIADEIQCGMGRS-----G---KFFAYEHAQILPDIMTSA--KALGCGLSVGAFVINQ-KVA  266 (395)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEECH-HHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEecccCCCcC-----C---cchhHHhcCCCCCEEEec--ccccCCCceEEEEEch-hhh
Confidence                999999999999999999999876431     1   112211  2235777766  7644556789866654 44 


Q ss_pred             ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+..   .+...++.+       +.+..+.+++.++++.+..+++.+++++..+.+++.+++
T Consensus       267 ~~~~---~~~~~~~~~-------~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~  318 (395)
T 3nx3_A          267 SNSL---EAGDHGSTY-------GGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDE  318 (395)
T ss_dssp             HHHS---CTTCCSSCB-------SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             hhhc---CCcccCCCC-------CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            3321   111122221       112333456666777665667777777777766666554

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.81  E-value=4.3e-19  Score=173.30  Aligned_cols=162  Identities=13%  Similarity=0.089  Sum_probs=126.1

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-CCC
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-TSS  257 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~~~  257 (435)
                      ++++.+++++|.+++ ++++|+|+++++.++++++.  ++.        |++++|+|.++...++..|++++.+|+ +++
T Consensus        54 ~lr~~la~~~~~~~~-~i~~t~g~~~al~~~~~~l~--gd~--------Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~  122 (350)
T 3fkd_A           54 TLRQMLAKRNSVDNN-AILVTNGPTAAFYQIAQAFR--GSR--------SLIAIPSFAEYEDACRMYEHEVCFYPSNEDI  122 (350)
T ss_dssp             HHHHHHHHHTTCCGG-GEEEESHHHHHHHHHHHHTT--TCE--------EEEEESCCHHHHHHHHHTTCEEEEEETTSCG
T ss_pred             HHHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHHC--CCE--------EEEeCCCcHHHHHHHHHcCCeEEEEecCCcc
Confidence            456677777776654 89999999999999999987  555        999999999999999999999999999 654


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC-CcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG-IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~-~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      ..+++        +++++|++++|+||||.+-+++++.++++.++ .++|+|++|+++...     +. .....+...+.
T Consensus       123 ~~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~-----~~-~~~~~~~~~~~  188 (350)
T 3fkd_A          123 GEADF--------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTE-----EV-IRPADIKGRKN  188 (350)
T ss_dssp             GGSCC--------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSS-----CC-CCGGGGTTCSS
T ss_pred             ccCcc--------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccC-----cc-hhhHHhhcCCC
Confidence            44554        57899999999999999999999999998876 799999999876531     11 11122333456


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      ++++.|++|+.. ++.++|+++. ++++.+.
T Consensus       189 ~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~  218 (350)
T 3fkd_A          189 LVMVYSFSHAYGIPGLRIGYIVA-NKDFMKR  218 (350)
T ss_dssp             EEEEEESHHHHSCGGGCCEEEEC-CHHHHHH
T ss_pred             EEEEecCchhccCcchheEeEEe-CHHHHHH
Confidence            788889999843 3466898665 6665543

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.81  E-value=1.9e-19  Score=180.67  Aligned_cols=189  Identities=11%  Similarity=0.024  Sum_probs=136.7

Q ss_pred             ccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHH--HHHHHHHH
Q psy10210        137 VSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESI--MMACKAYR  214 (435)
Q Consensus       137 ~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai--~~a~~a~~  214 (435)
                      ..|....|.+++++++++++.                                .++ +++++|+|+++++  .+++.++.
T Consensus        70 ~~Y~~~~G~~~lr~~ia~~~~--------------------------------~~~-~~i~~t~G~~~al~l~~~~~~l~  116 (422)
T 3d6k_A           70 RNYGGLLGIADIRELWAEALG--------------------------------LPA-DLVVAQDGSSLNIMFDLISWSYT  116 (422)
T ss_dssp             TSSCCSSCCHHHHHHHHHHHT--------------------------------CCG-GGEEECSSCHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCHHHHHHHHHHhC--------------------------------CCh-hHEEEecchHHHHHHHHHHHHhc
Confidence            356666788889998888762                                133 3899999999997  56677775


Q ss_pred             HHhhhhcC--C----CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEE-EeCCCCCcc
Q psy10210        215 DYAREEKG--I----SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLV-GSMPNFPYG  286 (435)
Q Consensus       215 ~~~~~~~g--~----~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~-~~~p~nptG  286 (435)
                      .+..  .|  +    .+++|++++|+|+++...++..|++++.+|+++++ +|++++++++++ ++++|+ +++||||||
T Consensus       117 ~~~~--~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG  193 (422)
T 3d6k_A          117 WGNN--DSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDPQVKGMWTVPVFGNPTG  193 (422)
T ss_dssp             HCCT--TCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTSTTEEEEEECCSSCTTTC
T ss_pred             Cccc--ccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCC
Confidence            4300  01  0    02359999999999999999999999999998665 999999999986 788888 689999999


Q ss_pred             cccC---HHHHHHHHH-HcCCcEEEeccccchhhhcccccCCCCCCC-C----CCCCCccEEEecCCCCCCccCCcEEEE
Q psy10210        287 TMDD---IGAIAKLGE-KYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D----FSLPGVTSISVDTHKYGFTPKGSSVVL  357 (435)
Q Consensus       287 ~~~~---i~~i~~la~-~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d----~~~~gvd~~~~s~hK~~~~p~g~g~il  357 (435)
                      .+-+   +++|.++|+ +||+++|+|++|+.+.+..   .+....++ +    ....+.+++..|++|++.++.++|+++
T Consensus       194 ~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~  270 (422)
T 3d6k_A          194 VTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSD---EFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFA  270 (422)
T ss_dssp             CCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS---CCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEE
T ss_pred             CCCCHHHHHHHHHHHhhccCCEEEEECCccccccCC---CCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEE
Confidence            9955   558888888 9999999999997422211   01111122 1    123456788889999844446689966


Q ss_pred             EeCCcccc
Q psy10210        358 YRDLKYKH  365 (435)
Q Consensus       358 ~~~~~~~~  365 (435)
                      .+ +++.+
T Consensus       271 ~~-~~l~~  277 (422)
T 3d6k_A          271 SS-KENIE  277 (422)
T ss_dssp             CC-HHHHH
T ss_pred             eC-HHHHH
Confidence            54 55543

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.81  E-value=2.1e-19  Score=179.52  Aligned_cols=166  Identities=15%  Similarity=0.187  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH---HHHHHc--CCE
Q psy10210        174 CKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD---KAANYF--GMK  248 (435)
Q Consensus       174 ~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~---~~~~~~--g~~  248 (435)
                      ..++..+++++++++|.++. +++++ +|++++.++++++.++++.        |++++++|.++.   ......  +..
T Consensus        75 ~~~~~~~~~~la~~~~~~~~-~v~~~-sGs~a~~~a~~~~~~~gd~--------v~~~~~~~~~~~~~~~~~~~~g~~~~  144 (420)
T 3gbx_A           75 DVVEQLAIDRAKELFGADYA-NVQPH-SGSQANFAVYTALLQPGDT--------VLGMNLAQGGHLTHGSPVNFSGKLYN  144 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCSEE-ECCCS-SHHHHHHHHHHHHCCTTCE--------EEEEEEC------------CHHHHSE
T ss_pred             HHHHHHHHHHHHHHhCCCCc-eeEec-CcHHHHHHHHHHhcCCCCE--------EEecchhhcceeccchhhhhccccee
Confidence            45566677788888888653 45454 5589999999998877766        999999998843   221222  345


Q ss_pred             EEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        249 VKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       249 v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      .+.++++.++.+|++++++++++ ++++|++++|+||  ...++++|.++|++||+++|+|++|+.+...-    +.  .
T Consensus       145 ~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~----~~--~  216 (420)
T 3gbx_A          145 IVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAA----GV--Y  216 (420)
T ss_dssp             EEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHT----TS--S
T ss_pred             EEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceec----cc--C
Confidence            66667777788999999999986 6999999999886  47789999999999999999999986544311    11  1


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeC
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD  360 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~  360 (435)
                      +...  ..+|+++.|+||++.||.| |+++.++
T Consensus       217 ~~~~--~~~di~~~s~sK~~~g~~g-g~~~~~~  246 (420)
T 3gbx_A          217 PNPV--PHAHVVTTTTHKTLAGPRG-GLILAKG  246 (420)
T ss_dssp             CCST--TTSSEEEEESSGGGCSCSC-EEEEESS
T ss_pred             Cccc--ccCCEEEeecccCCCCCCc-eEEEEcC
Confidence            1122  2479999999999657776 7755554

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.81  E-value=9.9e-19  Score=175.53  Aligned_cols=156  Identities=15%  Similarity=0.091  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~  251 (435)
                      ...++++.+++++|.+   ..+++++|++|+.++++++..+++.        |+++.++|+++...+    +..|++++.
T Consensus        59 ~~~~l~~~la~~~g~~---~~v~~~sGt~A~~~~l~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~~~g~~~~~  127 (421)
T 2ctz_A           59 TVDVLEKRLAALEGGK---AALATASGHAAQFLALTTLAQAGDN--------IVSTPNLYGGTFNQFKVTLKRLGIEVRF  127 (421)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEECSCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHhCCC---ceEEecCHHHHHHHHHHHHhCCCCE--------EEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence            3455666788888765   2355556799999999988655554        999999999987765    778999998


Q ss_pred             E-ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccc-cchhhhcccccCCCCCCC
Q psy10210        252 I-RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL-GGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       252 v-p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~-~~~~~~~~~~~g~~~~~~  329 (435)
                      + |.+     |++++++++++++++|++++++||+|.+.++++|.++|++||+++|+|++| +.+ .        ...++
T Consensus       128 ~~~~~-----d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g-~--------~~~~~  193 (421)
T 2ctz_A          128 TSREE-----RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG-Y--------LLRPL  193 (421)
T ss_dssp             CCTTC-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG-T--------SCCGG
T ss_pred             ECCCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc-c--------cCCcc
Confidence            8 653     799999999999999999999999999999999999999999999999999 532 1        11123


Q ss_pred             CCCCCCccEEEecCCCCCCccC-CcEEEEEe
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPK-GSSVVLYR  359 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~-g~g~il~~  359 (435)
                         ..++|+++.|+||++.+|. ++|++++.
T Consensus       194 ---~~~~Di~~~s~~K~l~~~g~~~G~~~~~  221 (421)
T 2ctz_A          194 ---AWGAALVTHSLTKWVGGHGAVIAGAIVD  221 (421)
T ss_dssp             ---GGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             ---ccCCeEEEECCcccccCCCCcEEEEEEe
Confidence               2368999999999976654 36776776

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.81  E-value=1.1e-18  Score=175.41  Aligned_cols=262  Identities=12%  Similarity=0.007  Sum_probs=165.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+..... ++..  .+  ......++++.++++++.+++ ++++|+||+||+.+++++++..... +|.
T Consensus        60 ~~p~v~~a~~~~~~~~~~-~~~~--~~--~~~~~~~l~~~la~~~~~~~~-~v~~~~ggtea~~~ai~~~~~~~~~-~g~  132 (429)
T 1s0a_A           60 NHPQLNAAMKSQIDAMSH-VMFG--GI--THAPAIELCRKLVAMTPQPLE-CVFLADSGSVAVEVAMKMALQYWQA-KGE  132 (429)
T ss_dssp             SCHHHHHHHHHHHHHCSC-CCCS--SE--ECHHHHHHHHHHHHHSCTTCC-EEEEESSHHHHHHHHHHHHHHHHHH-HTC
T ss_pred             CCHHHHHHHHHHHHhccc-cccc--cc--CCHHHHHHHHHHHHhCCCCCC-EEEEeCCHHHHHHHHHHHHHHHhcc-cCC
Confidence            378899999988875322 1110  11  123456677789999986554 8999999999999999987643221 233


Q ss_pred             CCCeEEEeCCCchhHHHHHH-HcC-------------CEEEEEecCC-----C-ccccHHHHHHHhh---cCceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAAN-YFG-------------MKVKHIRLTS-----S-YTVDLAALQSAIT---GNTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~-~~g-------------~~v~~vp~~~-----~-~~~d~~~l~~~i~---~~~~~v~~~~  280 (435)
                      ++++|++++|.|+++...+. ..|             ..+..+|++.     . +.+|+++++++++   +++++|+++.
T Consensus       133 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p  212 (429)
T 1s0a_A          133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEP  212 (429)
T ss_dssp             CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECS
T ss_pred             CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEee
Confidence            35579999998887543332 211             1355566542     2 3589999999997   4667777666


Q ss_pred             C-CCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcE
Q psy10210        281 P-NFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSS  354 (435)
Q Consensus       281 p-~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g  354 (435)
                      . +||+|.+.+    +++|.++|++||+++|+||+|++|...     |.. ..++......|++++|  |.+.++ .++|
T Consensus       213 ~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~-----g~~-~~~~~~~~~~d~~t~s--K~l~~G~~~iG  284 (429)
T 1s0a_A          213 IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRT-----GKL-FACEHAEIAPDILCLG--KALTGGTMTLS  284 (429)
T ss_dssp             SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----SSS-SGGGGGTCCCSEEEEC--GGGGTSSSCCE
T ss_pred             cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCccc-----chH-HHhhhcCCCCCEEEec--ccccCCCccce
Confidence            6 799997644    999999999999999999999876321     110 0112112245777766  765556 7889


Q ss_pred             EEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        355 VVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       355 ~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +++.++ ++.+..   ...-.++.....+.  +.+....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       285 ~~~~~~-~~~~~l---~~~~~~~~~~~~t~--~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l  350 (429)
T 1s0a_A          285 ATLTTR-EVAETI---SNGEAGCFMHGPTF--MGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPA  350 (429)
T ss_dssp             EEEECH-HHHHHH---HTSTTSSCSCCCTT--TTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGG
T ss_pred             EEEeCH-HHHHHh---hcCCCcccccCCCC--CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            977654 554331   11000000000111  1223334566677776655678888888888888877765

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.81  E-value=8.6e-19  Score=176.26  Aligned_cols=212  Identities=14%  Similarity=0.126  Sum_probs=147.0

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+. ..++.+++.+.+.+.....  ..+...|....|.+++++++++++.+.                    
T Consensus        58 ~i~l~~~~~~~-~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~l~~~ia~~~~~~--------------------  114 (432)
T 3ei9_A           58 VISLGIGDTTE-PIPEVITSAMAKKAHELST--IEGYSGYGAEQGAKPLRAAIAKTFYGG--------------------  114 (432)
T ss_dssp             CEECSSCCCCS-CCCHHHHHHHHHHHHHTTS--TTTCCCCCCTTCCHHHHHHHHHHHHTT--------------------
T ss_pred             eEEccCCCCCC-CCCHHHHHHHHHHHhcccc--cCCccCCCCCCCCHHHHHHHHHHHHcc--------------------
Confidence            34555565664 5566778887776653211  122334545557788888888877631                    


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC------------
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM------------  247 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~------------  247 (435)
                              ++.++ +++++|+|+++++.++ .++.++++.        |++++|+|+++...++..|.            
T Consensus       115 --------~~~~~-~~i~~t~G~~~al~~l-~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  176 (432)
T 3ei9_A          115 --------LGIGD-DDVFVSDGAKCDISRL-QVMFGSNVT--------IAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYG  176 (432)
T ss_dssp             --------TTCCG-GGEEEESCHHHHHHHH-HHHHCTTCC--------EEEEESCCTHHHHHHHHHTCSCCEETTTTEET
T ss_pred             --------CCCCc-ceEEECCChHHHHHHH-HHHcCCCCE--------EEEeCCCCHHHHHHHHHcCCcccccccccccC
Confidence                    12233 4899999999999874 666666666        99999999999999988874            


Q ss_pred             EEEEEecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210        248 KVKHIRLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       248 ~v~~vp~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      +++.+|++.  ++..|+++     .+++++|++++|+||||.+   +++++|+++|++||+++|+|++|+++...     
T Consensus       177 ~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~-----  246 (432)
T 3ei9_A          177 NIEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD-----  246 (432)
T ss_dssp             TCEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS-----
T ss_pred             ceEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccC-----
Confidence            688888873  23445433     3578999999999999998   56888889999999999999999987652     


Q ss_pred             CCCCCCCCCC-CCCccEEEecCCCCCC-ccCCcEEEEEeCCc
Q psy10210        323 GYPLPPFDFS-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLK  362 (435)
Q Consensus       323 g~~~~~~d~~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~  362 (435)
                      +.+.....+. ..+.++++.|++|.+. ++.++|+++.+++.
T Consensus       247 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~  288 (432)
T 3ei9_A          247 DNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKL  288 (432)
T ss_dssp             SCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTC
T ss_pred             CCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHH
Confidence            1111111111 1345788889999842 34558996666544

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.80  E-value=6.5e-19  Score=176.79  Aligned_cols=247  Identities=15%  Similarity=0.013  Sum_probs=168.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+.+......    .  ...+...++++.+++++|.   +++++|+||++|+.+++++++..... +|.
T Consensus        74 ~~p~v~~ai~~~~~~~~~~~~----~--~~~~~~~~l~~~la~~~g~---~~v~~~~ggteA~~~al~~~~~~~~~-~~~  143 (420)
T 2pb2_A           74 CHPALVEALKSQGETLWHTSN----V--FTNEPALRLGRKLIDATFA---ERVLFMNSGTEANETAFKLARHYACV-RHS  143 (420)
T ss_dssp             TCHHHHHHHHHHHTTCCCCCT----T--SCCHHHHHHHHHHHHHSSC---SEEEEESSHHHHHHHHHHHHHHHHHH-HTC
T ss_pred             CCHHHHHHHHHHHHhcccccC----c--cCCHHHHHHHHHHHhhCCC---CeEEEeCCHHHHHHHHHHHHHHHhhh-ccC
Confidence            378899999988876432111    1  1235667788888888863   38999999999999999998864332 333


Q ss_pred             CC-CeEEEeCCCchhHH-HHHHHcCCE------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccc--
Q psy10210        224 SL-PEIVLPTTAHPAFD-KAANYFGMK------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGT--  287 (435)
Q Consensus       224 ~~-~~viv~~~~~~~~~-~~~~~~g~~------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~--  287 (435)
                      ++ ++|++++++|++.. .++...|.+            +..+|.     .|++++++++++++++|++++++|++|.  
T Consensus       144 ~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~~~~~~vi~~p~~~~gG~~~  218 (420)
T 2pb2_A          144 PFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMDDHTCAVVVEPIQGEGGVQA  218 (420)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETTTTSEE
T ss_pred             CCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhccCceEEEEeCCcCCCCeec
Confidence            33 47999999887753 344445543            555654     3899999999989999999999988886  


Q ss_pred             --ccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC--CCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        288 --MDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD--FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       288 --~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d--~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                        .+++++|.++|++||+++|+||+|+++...     |   ..+.  ......|++++  +|.+.++.++|+++.++ ++
T Consensus       219 ~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~-----g---~~~~~~~~~~~~diit~--sK~l~~G~~iG~~~~~~-~l  287 (420)
T 2pb2_A          219 ATPEFLKGLRDLCDEHQALLVFDEVQCGMGRT-----G---DLFAYMHYGVTPDILTS--AKALGGGFPVSAMLTTQ-EI  287 (420)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECH-HH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEcCCcCcccC-----C---cHHHHHhcCCCCCeEEe--cccccCCCceEEEEEhH-HH
Confidence              278999999999999999999999876331     2   1121  11123577755  59865556689977765 44


Q ss_pred             ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+..   .....+.     +.  +-+....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       288 ~~~l---~~~~~~~-----t~--~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~  340 (420)
T 2pb2_A          288 ASAF---HVGSHGS-----TY--GGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAI  340 (420)
T ss_dssp             HTTC---C----CC-----EE--CCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhh---cCCCcCc-----cc--CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            4321   1111111     11  1223334567777888777788888888888887777654

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.80  E-value=8.3e-19  Score=176.34  Aligned_cols=256  Identities=12%  Similarity=-0.004  Sum_probs=158.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-  223 (435)
                      +|++.+++.+.+.......+     .....+...++++++++.++.+.+ ++++|+||+||+..++++++.+... +|. 
T Consensus        47 ~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~gg~ea~~~al~~~~~~~~~-~g~~  119 (430)
T 3i4j_A           47 RAEVGERMAAQAARLPFVHG-----SQFSSDVLEEYAGRLARFVGLPTF-RFWAVSGGSEATESAVKLARQYHVE-RGEP  119 (430)
T ss_dssp             CHHHHHHHHHHHHHCCCCCT-----TTCEEHHHHHHHHHHHHHTTCTTC-EEEEESSHHHHHHHHHHHHHHHHHH-TTCT
T ss_pred             CHHHHHHHHHHHHhcccccc-----cccCCHHHHHHHHHHHHhCCCCCC-EEEEeCcHHHHHHHHHHHHHHHHHh-cCCC
Confidence            78888988888776322111     123345666778888998887665 8999999999999999999876543 343 


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCC---------------EEEEEecCCC---ccccHHHHHHHhh----cCceEEEEeCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGM---------------KVKHIRLTSS---YTVDLAALQSAIT----GNTVMLVGSMP  281 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~---------------~v~~vp~~~~---~~~d~~~l~~~i~----~~~~~v~~~~p  281 (435)
                      .+++|++.++.|+++...+...+.               .+..+|.+..   +..|+++++++++    +++++|+++.+
T Consensus       120 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~  199 (430)
T 3i4j_A          120 GRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPV  199 (430)
T ss_dssp             TCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSS
T ss_pred             CCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence            356799999999987765544432               3334444322   3357789999887    45677777777


Q ss_pred             CC-CcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC---CccEEEecCCCCCCcc-CC
Q psy10210        282 NF-PYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP---GVTSISVDTHKYGFTP-KG  352 (435)
Q Consensus       282 ~n-ptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~---gvd~~~~s~hK~~~~p-~g  352 (435)
                      ++ ++|.+.+    +++|.++|++||+++|+||+|++|...     |   ..+.....   ..|++++|  |.+.++ .+
T Consensus       200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~-----g---~~~~~~~~~~~~~di~t~s--K~l~~G~~r  269 (430)
T 3i4j_A          200 VGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRC-----G---SPLALSRWSGVTPDIAVLG--KGLAAGYAP  269 (430)
T ss_dssp             CCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSGGGGTTTCCCSEEEEC--GGGTTTSSC
T ss_pred             ccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-----c---chhhhhhhcCCCCcEEEEc--ccccCCccc
Confidence            77 8888744    999999999999999999999987431     1   11222222   24677765  875444 55


Q ss_pred             cEEEEEeCCccccccccccC-CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        353 SSVVLYRDLKYKHCQYFVTS-DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       353 ~g~il~~~~~~~~~~~~~~~-~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      +|+++. ++++.+....... ...++.+       +-+..+.+++.++++.+..+++.+++++..+.+++.+++
T Consensus       270 ~G~~~~-~~~i~~~~~~~~~~~~~~~t~-------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~  335 (430)
T 3i4j_A          270 LAGLLA-APQVYETVMGGSGAFMHGFTY-------AGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQA  335 (430)
T ss_dssp             CEEEEE-CHHHHHHHHHTTCBCCCCCTT-------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEE-CHHHHHHHhccCCcccccCCC-------CCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence            788665 4555443211100 0112111       112233456667777766677777777777776666554

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.80  E-value=5.3e-19  Score=176.96  Aligned_cols=157  Identities=11%  Similarity=0.090  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp  253 (435)
                      .++++.+|+++|.+   ..++++||++|+.+++.++.+++|.        |+++++.|.+....+    +..|++++.++
T Consensus        85 ~~le~~lA~l~g~~---~~i~~ssGt~Ai~~al~~l~~~Gd~--------Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~  153 (415)
T 2fq6_A           85 FSLQQAMCELEGGA---GCVLFPCGAAAVANSILAFIEQGDH--------VLMTNTAYEPSQDFCSKILSKLGVTTSWFD  153 (415)
T ss_dssp             HHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTTCCTTCE--------EEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             HHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHHhCCCCE--------EEEeCCCchHHHHHHHHHHHHcCcEEEEEC
Confidence            44556778888764   4577789999999999988766665        999999999977554    45699999997


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      .+     |+++++++++++|++|++++|+||+|.+.|+++|+++|++  ||+++|+|++|+.+..         ..+++ 
T Consensus       154 ~~-----d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~---------~~p~~-  218 (415)
T 2fq6_A          154 PL-----IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL---------FKALD-  218 (415)
T ss_dssp             TT-----CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS---------SCGGG-
T ss_pred             CC-----CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc---------CCccc-
Confidence            63     7899999999999999999999999999999999999999  9999999999975421         12332 


Q ss_pred             CCCCccEEEecCCCCCCccCC---cEEEEEeCCccc
Q psy10210        332 SLPGVTSISVDTHKYGFTPKG---SSVVLYRDLKYK  364 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g---~g~il~~~~~~~  364 (435)
                        .|+|+++.|+||++ ++.|   .|+++.+ +++.
T Consensus       219 --~g~Div~~S~sK~l-g~~g~~~~G~l~~~-~~~~  250 (415)
T 2fq6_A          219 --FGIDVSIQAATKYL-VGHSDAMIGTAVCN-ARCW  250 (415)
T ss_dssp             --GTCSEEEEETTTTT-TCSSSCCCEEEEEC-TTTH
T ss_pred             --cCCeEEEEeCcccc-CCCCCceEEEEEeC-HHHH
Confidence              47899999999995 4444   5775554 4444

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.80  E-value=5e-19  Score=177.83  Aligned_cols=156  Identities=17%  Similarity=0.148  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEe
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIR  253 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp  253 (435)
                      .++++.+++++|.+   ..+++++|++|+.+++.++.++++.        |+++++.|.++..    .++..|++++.+|
T Consensus        85 ~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~al~~~Gd~--------Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~  153 (430)
T 3ri6_A           85 EDLEQRLKNLTGAL---GVLALGSGMAAISTAILTLARAGDS--------VVTTDRLFGHTLSLFQKTLPSFGIEVRFVD  153 (430)
T ss_dssp             HHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence            44556777788764   3567778899999999998777766        9999999999777    6678899999998


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      .+     |+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++|+|++|+.+..            .+...
T Consensus       154 ~~-----d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~------------~~~~~  216 (430)
T 3ri6_A          154 VM-----DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL------------LEAKR  216 (430)
T ss_dssp             TT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT------------CCGGG
T ss_pred             CC-----CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc------------CChHH
Confidence            75     89999999999999999999999999999999999999999999999999975432            22234


Q ss_pred             CCccEEEecCCCCCCcc--CCcEEEEEeCC
Q psy10210        334 PGVTSISVDTHKYGFTP--KGSSVVLYRDL  361 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p--~g~g~il~~~~  361 (435)
                      .|+|+++.|++|++.++  .-.|+++.+.+
T Consensus       217 ~g~div~~S~sK~l~g~g~~~gG~vv~~~~  246 (430)
T 3ri6_A          217 LGVDIEVLSSTKFISGGGTSVGGVLIDHGL  246 (430)
T ss_dssp             GTCSEEEEECCCEEETTEEECCEEEEECSC
T ss_pred             cCCEEEEECCcccccCCCCceEEEEEECCh
Confidence            57899999999996554  12355444433

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.80  E-value=1.4e-19  Score=180.19  Aligned_cols=159  Identities=17%  Similarity=0.133  Sum_probs=126.4

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~  251 (435)
                      ...++++.+++++|.+   +.+++++|++|+.++++ +.++++.        |+++.+.|++...    .++..|++++.
T Consensus        56 ~~~~lr~~la~~~g~~---~~i~~~sGt~a~~~al~-~~~~gd~--------Vi~~~~~y~~~~~~~~~~~~~~G~~v~~  123 (393)
T 1n8p_A           56 NRENLERAVAALENAQ---YGLAFSSGSATTATILQ-SLPQGSH--------AVSIGDVYGGTHRYFTKVANAHGVETSF  123 (393)
T ss_dssp             HHHHHHHHHHHHTTCS---EEEEESCHHHHHHHHHH-TSCSSCE--------EEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred             hHHHHHHHHHHHhCCC---cEEEECChHHHHHHHHH-HcCCCCE--------EEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence            3456777888888875   34555666999999999 6655554        9999999996554    34567999999


Q ss_pred             EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc----CCcEEEeccccchhhhcccccCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY----GIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~----~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      +|++     | ++++++++++|++|++++|+||+|.+.++++|.++|++|    |+++|+|++|+.+...         .
T Consensus       124 v~~~-----d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~---------~  188 (393)
T 1n8p_A          124 TNDL-----L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS---------N  188 (393)
T ss_dssp             ESSH-----H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC---------C
T ss_pred             eCCC-----h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC---------C
Confidence            9864     7 899999998999999999999999999999999999999    9999999999987641         1


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCC--c-EEEEEeCCcccc
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKG--S-SVVLYRDLKYKH  365 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g--~-g~il~~~~~~~~  365 (435)
                      +.+   .|+|+++.|+||+ ++|.|  + |+++.+++++.+
T Consensus       189 ~~~---~~~di~~~S~sK~-~g~~G~rigG~~~~~~~~~~~  225 (393)
T 1n8p_A          189 PLN---FGADIVVHSATKY-INGHSDVVLGVLATNNKPLYE  225 (393)
T ss_dssp             GGG---GTCSEEEEETTTT-TTCSSCCCCEEEEESCHHHHH
T ss_pred             HHH---cCCeEEEEECccc-ccCCCCceeEEEEeCCHHHHH
Confidence            222   3689999999998 56766  6 776665555544

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.80  E-value=6.8e-19  Score=178.68  Aligned_cols=161  Identities=17%  Similarity=0.188  Sum_probs=130.2

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEE
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKH  251 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~  251 (435)
                      ...++++++++++|.+   ++++++||++|+.+++. +.++++.        |++++|.|+++...    ++..|++++.
T Consensus       134 ~~~~l~~~la~~~g~~---~~i~~~sGt~al~~~l~-~~~~Gd~--------Vi~~~~~y~~~~~~~~~~~~~~G~~v~~  201 (464)
T 1ibj_A          134 TRDALESLLAKLDKAD---RAFCFTSGMAALSAVTH-LIKNGEE--------IVAGDDVYGGSDRLLSQVVPRSGVVVKR  201 (464)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHT-TSCTTCE--------EEEESSCCHHHHHHHHHTSGGGTCEEEE
T ss_pred             HHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHH-HhCCCCE--------EEEECCCchhHHHHHHHHHHHcCCEEEE
Confidence            4667788888888864   57778888999988775 4444544        99999999998764    4667999999


Q ss_pred             EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      +|.+     |++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+..         ..+++ 
T Consensus       202 v~~~-----d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~---------~~~~~-  266 (464)
T 1ibj_A          202 VNTT-----KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL---------SRPLE-  266 (464)
T ss_dssp             ECTT-----SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT---------CCGGG-
T ss_pred             eCCC-----CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccccc---------CChhh-
Confidence            9864     89999999999999999999999999999999999999999999999999975321         11333 


Q ss_pred             CCCCccEEEecCCCCCCccCCc--EEEEEeCCcccc
Q psy10210        332 SLPGVTSISVDTHKYGFTPKGS--SVVLYRDLKYKH  365 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~~~~p~g~--g~il~~~~~~~~  365 (435)
                        .|+|+++.|+||++.+|.|+  |+++.+++++.+
T Consensus       267 --~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~  300 (464)
T 1ibj_A          267 --LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAK  300 (464)
T ss_dssp             --TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHH
T ss_pred             --cCCEEEEECCcccccCCCCCcEEEEEEChHHHHH
Confidence              37899999999987777665  887777655543

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.80  E-value=1.5e-18  Score=182.77  Aligned_cols=228  Identities=13%  Similarity=0.066  Sum_probs=158.4

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ....++++.+|+++|.+.  .+++++|++.|+..++.++.+++|.        |+++.++|.++..++...|++++.++.
T Consensus       195 g~i~eaE~~lA~~fGa~~--a~~v~nGts~An~~ai~al~~pGD~--------VLv~r~~H~S~~~~l~lsGa~pv~v~~  264 (715)
T 3n75_A          195 GPHKEAEQYIARVFNADR--SYMVTNGTSTANKIVGMYSAPAGST--------ILIDRNCHKSLTHLMMMSDVTPIYFRP  264 (715)
T ss_dssp             THHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHHCCTTCE--------EEEESSCCHHHHHHHHHSCCEEEEECC
T ss_pred             HHHHHHHHHHHHHhCCCC--ceEECcHHHHHHHHHHHHhCCCCCE--------EEECCCccHHHHHHHHHcCCEEEEEec
Confidence            346677788999999853  5677788889999999999988887        999999999999999999999999987


Q ss_pred             C-CCcc----c-----cHHHHHHHhhcC--ce---EEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210        255 T-SSYT----V-----DLAALQSAITGN--TV---MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       255 ~-~~~~----~-----d~~~l~~~i~~~--~~---~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~  319 (435)
                      + +++.    +     |++++++++.++  ++   ++++++| |++|.+.++++|.++|++++  +++|++|++++. |.
T Consensus       265 ~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~-f~  340 (715)
T 3n75_A          265 TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTN-FS  340 (715)
T ss_dssp             CBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGG-GS
T ss_pred             cccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccc-cC
Confidence            5 3333    3     899999999753  34   8999999 89999999999999998764  799999987642 11


Q ss_pred             cccCCCCCCCCCCCCCccEE---EecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHH
Q psy10210        320 SAAGYPLPPFDFSLPGVTSI---SVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATC  396 (435)
Q Consensus       320 ~~~g~~~~~~d~~~~gvd~~---~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~  396 (435)
                      ... .+...... ..++|.+   +.|+||++.++.++|+++++++ .....+.....+.        ..+|.+...++++
T Consensus       341 ~~~-~~~~al~~-g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~-i~~~~~~~~~~~~--------~STSpsy~~~Asl  409 (715)
T 3n75_A          341 PIY-EGKCGMSG-GRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMH--------TTTSPHYGIVAST  409 (715)
T ss_dssp             GGG-TTSSTTSS-SCCTTCEEEEEECHHHHSSCCTTCEEEEEESC-CCHHHHHHHHHHT--------SCSSCCHHHHHHH
T ss_pred             Ccc-cccccccc-CcCCCEEEEEEecccccccCCCCeeEEEeCch-hhHHHHHHHHHhh--------cCCCchHHHHHHH
Confidence            110 00001111 0125655   8899999878878899888875 2211111111111        1235555666677


Q ss_pred             HHHHHHhcH---HHHHHHHHHHHHHHHHHHHhcC
Q psy10210        397 WAAMMYFGF---EAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       397 ~a~l~~~g~---~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      -++++.+..   +.+.++..+..+.+++.+++++
T Consensus       410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~  443 (715)
T 3n75_A          410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR  443 (715)
T ss_dssp             HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence            777766653   2344555555555665555554

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.68  E-value=2.7e-21  Score=192.12  Aligned_cols=177  Identities=13%  Similarity=0.115  Sum_probs=135.3

Q ss_pred             HHHHHHHHHHHHhC--CCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        176 MEAEVIKMCARMFN--GGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       176 ~e~~~~~~la~l~g--~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                      ++..+.+++.+.+|  .++ +++++|+|+++++.++++++.++++.        |+++.|+|+++...++..|++++.+|
T Consensus        71 l~~~la~~l~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~~~~~~~~~~~~g~~~~~~~  141 (392)
T 3b1d_A           71 LLQAVLDWEKSEHQYSFDK-EDIVFVEGVVPAISIAIQAFTKEGEA--------VLINSPVYPPFARSVRLNNRKLVSNS  141 (392)
Confidence            33333344444444  233 38999999999999999999887777        99999999999999999999999999


Q ss_pred             cC-C--CccccHHHHHHHhh-cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        254 LT-S--SYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       254 ~~-~--~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      .+ +  ++.+|+++++++++ +++++|++++|+||||.+   +++++|.++|++||+++|+|++|+++.+.     |...
T Consensus       142 ~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~  216 (392)
T 3b1d_A          142 LKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLF-----GHEH  216 (392)
Confidence            85 3  35689999999997 678999999999999998   46999999999999999999999988652     1111


Q ss_pred             CC-CCCCC--CCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210        327 PP-FDFSL--PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       327 ~~-~d~~~--~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~  366 (435)
                      .+ ..+..  .+.++++.|++|.+. ++..+|+++.+++++.+.
T Consensus       217 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  260 (392)
T 3b1d_A          217 VSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQ  260 (392)
Confidence            11 12211  345677888999853 345679877776656544

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.80  E-value=1.6e-18  Score=172.49  Aligned_cols=149  Identities=12%  Similarity=0.050  Sum_probs=108.5

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE-EEEEecCCC--ccccHHHHHHHhh
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK-VKHIRLTSS--YTVDLAALQSAIT  270 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~-v~~vp~~~~--~~~d~~~l~~~i~  270 (435)
                      +++++|+|+++++.+++.. ..+++        +|++++|+|+++...++..|++ ++.+|++++  +..|+++    + 
T Consensus        96 ~~v~~~~G~~~al~~~~~~-~~~gd--------~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~-  161 (400)
T 3asa_A           96 KEIFISDGAKVDLFRLLSF-FGPNQ--------TVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D-  161 (400)
T ss_dssp             GGEEEESCHHHHHHHHHHH-HCSSC--------EEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T-
T ss_pred             HHEEEccChHHHHHHHHHH-cCCCC--------EEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c-
Confidence            3899999999999987643 34444        4999999999999999999998 999998743  2334322    1 


Q ss_pred             cCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCC-CCccEEEecCCC
Q psy10210        271 GNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSL-PGVTSISVDTHK  345 (435)
Q Consensus       271 ~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~-~gvd~~~~s~hK  345 (435)
                      +++++|++++|+||||.+-   ++++|+++|++||+++|+|++|+++...     +....++ .+.. .+.+++..|++|
T Consensus       162 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~s~sK  236 (400)
T 3asa_A          162 THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISD-----PSLPKSIFEIPDARFCAIEINSFSK  236 (400)
T ss_dssp             CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCC-----TTSCSSGGGSTTGGGTEEEEEECCG
T ss_pred             cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcC-----CCCCCchhhCCCCCCceEEEecchh
Confidence            5789999999999999994   4778999999999999999999976531     1100111 1111 234577889999


Q ss_pred             CCC-ccCCcEEEEEeCC
Q psy10210        346 YGF-TPKGSSVVLYRDL  361 (435)
Q Consensus       346 ~~~-~p~g~g~il~~~~  361 (435)
                      ++. ++.++|+++.+++
T Consensus       237 ~~g~~GlriG~~~~~~~  253 (400)
T 3asa_A          237 PLGFAGIRLGWTVIPQE  253 (400)
T ss_dssp             GGTTTTCCCEEEECCTT
T ss_pred             hcCCcchheeEEeeChh
Confidence            842 2345799665543

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.80  E-value=1.4e-18  Score=168.69  Aligned_cols=157  Identities=15%  Similarity=0.143  Sum_probs=122.7

Q ss_pred             HHHHHHHHhC---CCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        180 VIKMCARMFN---GGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       180 ~~~~la~l~g---~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                      +++.++++++   .++ +++++|+|+++++.++++++   ++.        |+++ |+|+++...++..|++++.+|+++
T Consensus        61 lr~~la~~~~~~~~~~-~~v~~~~G~~~al~~~~~~~---gd~--------Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~  127 (335)
T 1uu1_A           61 LIEKILSYLDTDFLSK-NNVSVGNGADEIIYVMMLMF---DRS--------VFFP-PTYSCYRIFAKAVGAKFLEVPLTK  127 (335)
T ss_dssp             HHHHHHHHHTCSSCCG-GGEEEESSHHHHHHHHHHHS---SEE--------EECS-SSCHHHHHHHHHHTCEEEECCCCT
T ss_pred             HHHHHHHHcCCCCCCH-HHEEEcCChHHHHHHHHHHh---CCc--------EEEC-CCcHHHHHHHHHcCCeEEEeccCC
Confidence            4444444554   444 48999999999999999988   555        9999 999999999999999999999887


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCCCC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPG  335 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~g  335 (435)
                      ++.+|++++     +++++|++++|+||||.+-+.+++.++++..| ++|+|++|+++..      +   +..+ +...+
T Consensus       128 ~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~------~---~~~~~~~~~~  192 (335)
T 1uu1_A          128 DLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHG------E---SYVDFLKKYE  192 (335)
T ss_dssp             TSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHC------C---CCGGGGGTCS
T ss_pred             CCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcc------h---hHHHHhhhCC
Confidence            777888877     57899999999999999999999999999889 9999999987642      1   1122 12345


Q ss_pred             ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .++++.|++|++. ++.++|+++. ++++.+
T Consensus       193 ~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~  222 (335)
T 1uu1_A          193 NLAVIRTFSKAFSLAAQRVGYVVA-SEKFID  222 (335)
T ss_dssp             SEEEEEESTTTTTCGGGCCEEEEE-CHHHHH
T ss_pred             CEEEEecchhhcCCcccCeEEEEe-CHHHHH
Confidence            6788889999843 2234799766 555543

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.79  E-value=1.3e-18  Score=176.17  Aligned_cols=228  Identities=13%  Similarity=0.030  Sum_probs=146.3

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCc-hhHHHHHHHcCCEEEEEecCC-
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAH-PAFDKAANYFGMKVKHIRLTS-  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~-~~~~~~~~~~g~~v~~vp~~~-  256 (435)
                      ++++.++++++.+   ++++|+||++|+.++++++.++        ++  +++.++| .++..++...|++++.+|+++ 
T Consensus        79 ~l~~~la~~~~~~---~~~~~~~gt~a~~~al~~l~~~--------gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~  145 (456)
T 2ez2_A           79 HLERTVQELFGFK---HIVPTHQGRGAENLLSQLAIKP--------GQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEA  145 (456)
T ss_dssp             HHHHHHHHHHCCS---EEEEESSHHHHHHHHHHHHCCT--------TC--EEEESSCCHHHHHHHHHTTCEEEECBCGGG
T ss_pred             HHHHHHHHHhCCC---cEEEeCCcHHHHHHHHHHhCCC--------CC--EeccccccchhHHHHHHcCCEEEEeccccc
Confidence            3445666666653   6899999999999999988432        23  7788888 777889999999999998863 


Q ss_pred             ---------CccccHHHHHHHhhcCc----eEEEEeCCCC-Cccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210        257 ---------SYTVDLAALQSAITGNT----VMLVGSMPNF-PYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       257 ---------~~~~d~~~l~~~i~~~~----~~v~~~~p~n-ptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~  319 (435)
                               ++.+|++++++++++++    ++|++++|+| |+|.+-   ++++|.++|++||+++|+|++|+.+...|.
T Consensus       146 ~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~  225 (456)
T 2ez2_A          146 HDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFI  225 (456)
T ss_dssp             GCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHH
T ss_pred             ccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccc
Confidence                     26789999999998765    8999999998 999885   499999999999999999999986311010


Q ss_pred             cc--cCCCCCCCC-C---CCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHH
Q psy10210        320 SA--AGYPLPPFD-F---SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGII  393 (435)
Q Consensus       320 ~~--~g~~~~~~d-~---~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~i  393 (435)
                      ..  ..+...++. +   .....|++++|+||++..| ..|+++.+++++.+........+.+.    .+..+. +...+
T Consensus       226 ~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~  299 (456)
T 2ez2_A          226 KEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEGM----PSYGGL-AGRDM  299 (456)
T ss_dssp             HHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTCC----TTTTTC-CHHHH
T ss_pred             cccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccCc----ccccCc-chhHH
Confidence            00  011111110 0   0012578888899996544 35776665666544321111111110    011111 11122


Q ss_pred             HH-HHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        394 AT-CWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       394 a~-~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ++ +.+.+..++ +.+.++.+++.+.+.+.++++
T Consensus       300 ~a~a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~  332 (456)
T 2ez2_A          300 EAMAIGLREAMQ-YEYIEHRVKQVRYLGDKLKAA  332 (456)
T ss_dssp             HHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHhcC
Confidence            23 444444444 556666666666666666653

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.79  E-value=1.6e-18  Score=176.46  Aligned_cols=259  Identities=17%  Similarity=0.126  Sum_probs=173.3

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.....    .......+...++.+.++++++.+.+ ++++++||+||+..++++++..... +|.
T Consensus        72 ~~p~v~~A~~~~~~~~~~~~----~~~~~~~~~~~~lae~l~~~~~~~~~-~v~~~~sGseA~~~aik~a~~~~~~-~g~  145 (472)
T 3hmu_A           72 GRDELAEVAARQMRELPYYN----TFFKTTHVPAIALAQKLAELAPGDLN-HVFFAGGGSEANDTNIRMVRTYWQN-KGQ  145 (472)
T ss_dssp             CCHHHHHHHHHHHHHCSCCC----SSSSEECHHHHHHHHHHHHHSCTTEE-EEEEESSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             CCHHHHHHHHHHHHhccccc----cccccCCHHHHHHHHHHHHhCCCCCC-EEEEeCCHHHHHHHHHHHHHHHHHh-cCC
Confidence            37999999999887643111    11223345667788888888865444 8999999999999999999876543 443


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcCC------------EEEEEecCCCcc----cc--------HHHHHHHhh----cCce
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFGM------------KVKHIRLTSSYT----VD--------LAALQSAIT----GNTV  274 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g~------------~v~~vp~~~~~~----~d--------~~~l~~~i~----~~~~  274 (435)
                       .+++||+.+++|+++...+...+.            .+..+|....+.    .|        +++++++++    ++++
T Consensus       146 ~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a  225 (472)
T 3hmu_A          146 PEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVA  225 (472)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred             CCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence             356799999999886655544432            355666432111    23        788888886    4678


Q ss_pred             EEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCC
Q psy10210        275 MLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGF  348 (435)
Q Consensus       275 ~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~  348 (435)
                      +|+++.+++++|.+.+    +++|.++|++||+++|+||+|.+|...     |   ..+.....  ..|+++++  |.+.
T Consensus       226 avi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~-----G---~~~a~~~~~v~pdi~t~s--K~l~  295 (472)
T 3hmu_A          226 AFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRT-----G---NWFGTQTMGIRPHIMTIA--KGLS  295 (472)
T ss_dssp             EEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSCHHHHHTCCCSEEEEC--GGGT
T ss_pred             EEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCccc-----C---ccchhHHhCCCCceeeec--hhhh
Confidence            8888888888888755    999999999999999999999987431     2   11211111  24788776  8744


Q ss_pred             cc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHHHhc
Q psy10210        349 TP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV-RYHFNYKSCLQNL  426 (435)
Q Consensus       349 ~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~-~~~~~~~~~~~~l  426 (435)
                      ++ .++|+++.++ ++.+.. .......+++|+     +  +..+.+++.++++.+..+++.++++ +..+.+++.++++
T Consensus       296 gg~~plG~v~~~~-~i~~~~-~~~~~~~~~t~~-----~--np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l  366 (472)
T 3hmu_A          296 SGYAPIGGSIVCD-EVAHVI-GKDEFNHGYTYS-----G--HPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEAL  366 (472)
T ss_dssp             TTSSCCEEEEEEH-HHHHHH-TTSCBCCCCTTT-----T--CHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGG
T ss_pred             cCCcceEEEEECH-HHHHhc-ccCCccccCCCC-----C--CHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            44 5778866654 444331 101112222222     1  2334467778888877778888888 8888888888766


Q ss_pred             C
Q psy10210        427 S  427 (435)
Q Consensus       427 ~  427 (435)
                      .
T Consensus       367 ~  367 (472)
T 3hmu_A          367 T  367 (472)
T ss_dssp             G
T ss_pred             h
Confidence            4

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.79  E-value=2.2e-19  Score=174.91  Aligned_cols=167  Identities=18%  Similarity=0.174  Sum_probs=123.3

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEEecC
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHIRLT  255 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~vp~~  255 (435)
                      ++++.+++++|.+   .+++++|||+++.++++++.++++.        |++++|+|.+...   .+...|++++.+ .+
T Consensus        42 ~l~~~la~~~g~~---~~~~~~~gt~a~~~~~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~  109 (347)
T 1jg8_A           42 ELERLAAETFGKE---AALFVPSGTMGNQVSIMAHTQRGDE--------VILEADSHIFWYEVGAMAVLSGVMPHPV-PG  109 (347)
T ss_dssp             HHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHCCTTCE--------EEEETTCHHHHSSTTHHHHHTCCEEEEE-CE
T ss_pred             HHHHHHHHHhCCc---eEEEecCcHHHHHHHHHHhcCCCCE--------EEEcCcchhhhccccchhhccCeEEEEe-cC
Confidence            4445666666653   5688889999999999888766665        9999999987543   567789999988 55


Q ss_pred             CCccccHHHHHHHhhc------CceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        256 SSYTVDLAALQSAITG------NTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~------~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +++.+|++++++++++      ++++|++++|+||| |.+   +++++|.++|++||+++|+|++|..+...+   .+. 
T Consensus       110 ~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~---~~~-  185 (347)
T 1jg8_A          110 KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIA---SGV-  185 (347)
T ss_dssp             ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHH---HCC-
T ss_pred             CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhh---cCC-
Confidence            6677899999999975      68999999999999 988   457899999999999999999875322111   111 


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                        +......++|.+++++||++.+|.  |++++.++++.+
T Consensus       186 --~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~  221 (347)
T 1jg8_A          186 --PVKEYAGYADSVMFCLSKGLCAPV--GSVVVGDRDFIE  221 (347)
T ss_dssp             --CHHHHHHTCSEEEEESSSTTCCSS--CEEEEECHHHHH
T ss_pred             --ChHHhcccccEEEEecccccCCCc--eEEEEcCHHHHH
Confidence              111111257888899999865554  444566665543

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.79  E-value=8e-19  Score=173.46  Aligned_cols=161  Identities=9%  Similarity=0.098  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh---HHHHHHHcCCEEEEEe
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA---FDKAANYFGMKVKHIR  253 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~---~~~~~~~~g~~v~~vp  253 (435)
                      +.++++.+++++|.++++++++|+||++|+.+++.++  +++.        |++++|+|++   ....++..|++++.+ 
T Consensus        60 ~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~--------Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-  128 (374)
T 2aeu_A           60 AEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKK--------VIHYLPELPGHPSIERSCKIVNAKYFES-  128 (374)
T ss_dssp             HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSE--------EEEECSSSSCCTHHHHHHHHTTCEEEEE-
T ss_pred             HHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCE--------EEEecCCCCccHHHHHHHHHcCcEEEEe-
Confidence            3455566677788743347899999999999999987  6655        9999996655   333777889999887 


Q ss_pred             cCCCccccHHHHHHHhhcCceE-EEEeCCCCCcc-cccCHHHHHHHHHHcCCcEEEeccccchhh-hcccccCCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVM-LVGSMPNFPYG-TMDDIGAIAKLGEKYGIPVHVDCCLGGFLA-PFMSAAGYPLPPFD  330 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~-v~~~~p~nptG-~~~~i~~i~~la~~~~~~livD~~~~~~~~-~~~~~~g~~~~~~d  330 (435)
                            .|+++++++ ++++++ |++++|+||+| ...++++|.++|++||+++|+|++|+.+.. +.     ....+.+
T Consensus       129 ------~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-----~~~~~~~  196 (374)
T 2aeu_A          129 ------DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLF-----NQPPALK  196 (374)
T ss_dssp             ------SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-----TCCCHHH
T ss_pred             ------CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCccccccccc-----ccCCccc
Confidence                  378999988 778999 99999999999 889999999999999999999999987642 10     0000111


Q ss_pred             CCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        331 FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                         .++|+++.|+||++.| .++|+++.++ ++.+
T Consensus       197 ---~~~di~~~S~sK~l~g-~~~G~~~~~~-~~~~  226 (374)
T 2aeu_A          197 ---LGADLVVTSTDKLMEG-PRGGLLAGKK-ELVD  226 (374)
T ss_dssp             ---HTCSEEEEETTSSSSS-CSCEEEEEEH-HHHH
T ss_pred             ---cCCcEEEecCcccccC-cceEEEEECH-HHHH
Confidence               3579999999999544 5789866554 5543

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.79  E-value=6.8e-18  Score=172.09  Aligned_cols=259  Identities=14%  Similarity=0.034  Sum_probs=175.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.....+.     ....+...++.++++++++.+.+ ++++++||+||+..++++++.+... +|.
T Consensus        71 ~~p~v~~A~~~~l~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~~-~v~~~~sGseA~~~Aik~a~~~~~~-~g~  143 (476)
T 3i5t_A           71 GRREIVDAMAHQAMVLPYASPW-----YMATSPAARLAEKIATLTPGDLN-RIFFTTGGSTAVDSALRFSEFYNNV-LGR  143 (476)
T ss_dssp             CCHHHHHHHHHHHHHCCCCCTT-----TCBCHHHHHHHHHHHTTSSTTCC-EEEEESSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             CCHHHHHHHHHHHHhccCcccC-----ccCCHHHHHHHHHHHhcCCCCcC-EEEEeCchHHHHHHHHHHHHHHHHh-cCC
Confidence            3799999999998874322221     23446677888899998875554 8999999999999999999887544 443


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCc---ccc--------HHHHHHHhh----cCce
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSY---TVD--------LAALQSAIT----GNTV  274 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~---~~d--------~~~l~~~i~----~~~~  274 (435)
                       .+++||+.++.|+++...+...+.             .+..++....+   ..|        ++++++++.    ++++
T Consensus       144 ~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a  223 (476)
T 3i5t_A          144 PQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIA  223 (476)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred             CCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEE
Confidence             356899999999987655554322             23445432111   112        788888886    4678


Q ss_pred             EEEEeCCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCC--ccEEEecCCCCC
Q psy10210        275 MLVGSMPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG--VTSISVDTHKYG  347 (435)
Q Consensus       275 ~v~~~~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g--vd~~~~s~hK~~  347 (435)
                      +|+++.+++++|.+.    .+++|.++|++||+++|+||+|++|...     |   ..+.+. ..+  .|+++++  |.+
T Consensus       224 avi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~-----G---~~~~~~~~~~v~pdi~t~s--K~l  293 (476)
T 3i5t_A          224 AFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRC-----G---EWFASEKVFGVVPDIITFA--KGV  293 (476)
T ss_dssp             EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSCHHHHTTCCCCSEEEEC--GGG
T ss_pred             EEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc-----c---CceeeecccCCCcchhhhh--hhh
Confidence            899998888888763    3999999999999999999999987431     2   122222 223  4788776  875


Q ss_pred             Ccc-CCcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q psy10210        348 FTP-KGSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSC  422 (435)
Q Consensus       348 ~~p-~g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~  422 (435)
                      .++ .++|+++.+ +++.+......    .-..+++++     +  +..+.+++.++++.+..+++.+++++..+.+++.
T Consensus       294 ~~G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~-----~--np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~  365 (476)
T 3i5t_A          294 TSGYVPLGGLAIS-EAVLARISGENAKGSWFTNGYTYS-----N--QPVACAAALANIELMEREGIVDQAREMADYFAAA  365 (476)
T ss_dssp             GTTSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCTTT-----T--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             cCCCcCeEEEEEC-HHHHHHHhcCCcccccccccCCCC-----c--CHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            555 567886664 45543321110    002222222     1  2334467778888887788899999999988888


Q ss_pred             HHhcC
Q psy10210        423 LQNLS  427 (435)
Q Consensus       423 ~~~l~  427 (435)
                      ++.+.
T Consensus       366 L~~l~  370 (476)
T 3i5t_A          366 LASLR  370 (476)
T ss_dssp             HHTTT
T ss_pred             HHHHh
Confidence            88764

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.79  E-value=5.2e-18  Score=170.91  Aligned_cols=248  Identities=14%  Similarity=0.066  Sum_probs=158.7

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+++.+....+.    .  ...+...++++.+++++|.   +++++|+||++|+..++++++......+|.
T Consensus        82 ~~p~v~~ai~~~~~~~~~~~~----~--~~~~~~~~l~~~la~~~g~---~~v~~~~sGseA~~~al~~a~~~~~~~~g~  152 (433)
T 1z7d_A           82 CHPNILNAMINQAKNLTICSR----A--FFSVPLGICERYLTNLLGY---DKVLMMNTGAEANETAYKLCRKWGYEVKKI  152 (433)
T ss_dssp             TCHHHHHHHHHHHTTCSCCCT----T--SEEHHHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCHHHHHHHHHHHHhCCCccC----C--cCCHHHHHHHHHHHhhcCC---CeEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence            478999999998876422111    1  1234566777788888863   389999999999999999987543222333


Q ss_pred             -C-CCeEEEeCCCchhHHH-HHHHcC------------CEEEEEecCCCccccHHHHHHHh-hcCceEEEEeCCCCCccc
Q psy10210        224 -S-LPEIVLPTTAHPAFDK-AANYFG------------MKVKHIRLTSSYTVDLAALQSAI-TGNTVMLVGSMPNFPYGT  287 (435)
Q Consensus       224 -~-~~~viv~~~~~~~~~~-~~~~~g------------~~v~~vp~~~~~~~d~~~l~~~i-~~~~~~v~~~~p~nptG~  287 (435)
                       + +++|++.+++|++... ++...|            .++..+|.     .|++++++++ ++++++|+++..++++|.
T Consensus       153 ~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~~vi~ep~~~~~G~  227 (433)
T 1z7d_A          153 PENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNVCAFIVEPIQGEAGV  227 (433)
T ss_dssp             CTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTEEEEEECSSBSTTTS
T ss_pred             CCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEEEEEEECCCCCCCc
Confidence             2 3679999999887543 333333            24455553     3899999999 577888888877778897


Q ss_pred             c----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC--CCccEEEecCCCCCCcc-CCcEEEEEeC
Q psy10210        288 M----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL--PGVTSISVDTHKYGFTP-KGSSVVLYRD  360 (435)
Q Consensus       288 ~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~--~gvd~~~~s~hK~~~~p-~g~g~il~~~  360 (435)
                      +    +++++|.++|++||+++|+||+|++|..     .|   ..+.+..  ..+|++++  +|.+.++ .++|+++.++
T Consensus       228 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~-----~g---~~~~~~~~~~~~di~t~--sK~l~~G~~~~G~v~~~~  297 (433)
T 1z7d_A          228 IVPSDNYLQGVYDICKKYNVLFVADEVQTGLGR-----TG---KLLCVHHYNVKPDVILL--GKALSGGHYPISAVLAND  297 (433)
T ss_dssp             BCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT-----TS---SSSGGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECH
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEecCccCCCc-----CC---cchhhHhcCCCCCEEEE--CccccCCCCCeEEEEECH
Confidence            6    3899999999999999999999987532     12   1222221  23577755  4875444 4588877654


Q ss_pred             CccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        361 LKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       361 ~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       ++.+..   .+...++++     .+  +....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       298 -~~~~~l---~~~~~~~t~-----~~--~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l  352 (433)
T 1z7d_A          298 -DIMLVI---KPGEHGSTY-----GG--NPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRE  352 (433)
T ss_dssp             -HHHTTC---CTTCCCCTT-----TT--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHhhh---ccccccccC-----CC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence             544331   111222222     12  23344567778887766778888888888888777764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.79  E-value=6.9e-19  Score=178.53  Aligned_cols=259  Identities=13%  Similarity=0.014  Sum_probs=173.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.....     ......+...+++++++++++...+ ++++|+||+||+..++++++..... +|.
T Consensus        92 ~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~~L~e~la~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~-~g~  164 (457)
T 3tfu_A           92 GHPALDQALTTQLRVMNHVM-----FGGLTHEPAARLAKLLVDITPAGLD-TVFFSDSGSVSVEVAAKMALQYWRG-RGL  164 (457)
T ss_dssp             TCHHHHHHHHHHHHHCSCCC-----SSSEECHHHHHHHHHHHHHSSTTEE-EEEEESSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             CCHHHHHHHHHHHHhccCcc-----ccccCCHHHHHHHHHHHHhCCCCcC-EEEEeCcHHHHHHHHHHHHHHHHHh-cCC
Confidence            38999999999987642211     0112345566888899999976554 8999999999999999999876443 342


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcC--------------CEEEEEecC--CCccccHHHHHHHhh---cCceEEEEeC-CC
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFG--------------MKVKHIRLT--SSYTVDLAALQSAIT---GNTVMLVGSM-PN  282 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g--------------~~v~~vp~~--~~~~~d~~~l~~~i~---~~~~~v~~~~-p~  282 (435)
                       .+.+|++.++.|++....+...+              ..+..+|..  .....|+++++++++   +++++|+++. ++
T Consensus       165 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~  244 (457)
T 3tfu_A          165 PGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQ  244 (457)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEE
T ss_pred             CCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCc
Confidence             34579999999887554444431              133444443  122358899999997   6788999998 89


Q ss_pred             CCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC--CCccEEEecCCCCCCcc-CCcEE
Q psy10210        283 FPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL--PGVTSISVDTHKYGFTP-KGSSV  355 (435)
Q Consensus       283 nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~--~gvd~~~~s~hK~~~~p-~g~g~  355 (435)
                      |++|.+.+    +++|.++|++||+++|+||+|.+|...     |   ..+.+..  ...|++++|  |.+.++ .++|+
T Consensus       245 ~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~-----G---~~~a~~~~~~~pdiit~s--K~l~gG~~~lG~  314 (457)
T 3tfu_A          245 GAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRT-----G---ALFAADHAGVSPDIMCVG--KALTGGYLSLAA  314 (457)
T ss_dssp             CTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSTHHHHTCCCSEEEEC--GGGGTTSSCCEE
T ss_pred             CCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccc-----c---chhHhHhcCCCceEEEEC--hhhhCCCcceEE
Confidence            99998843    999999999999999999999886431     2   1222211  234777665  864444 47888


Q ss_pred             EEEeCCcccccccc--ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        356 VLYRDLKYKHCQYF--VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       356 il~~~~~~~~~~~~--~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++.++ ++.+....  ......+++|+       -+..+.+++.++++.+..+++.+++++..+.+++.++++.
T Consensus       315 v~~~~-~i~~~~~~~~~~~~~~~~t~~-------~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~  380 (457)
T 3tfu_A          315 TLCTA-DVAHTISAGAAGALMHGPTFM-------ANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR  380 (457)
T ss_dssp             EEEEH-HHHHHHHHSSSCSCCCCCTTT-------TCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG
T ss_pred             EEEcH-HHHHHhhccCCCceeEecCCC-------cCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            77665 44332110  01112222222       1333445677778877667888889988888888887664

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.79  E-value=4.3e-19  Score=173.69  Aligned_cols=169  Identities=12%  Similarity=0.133  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEEec
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHIRL  254 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~vp~  254 (435)
                      .++++++++++|.+   ..++++||++|+.++++++..+++.      +.|+++.+.|++...   .+...|++++.+|.
T Consensus        50 ~~l~~~la~~~~~~---~~i~~~~G~~a~~~al~~~~~~gd~------~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~  120 (357)
T 3lws_A           50 EPFEQKFADVLGMD---DAVFFPSGTMAQQVALRIWSDETDN------RTVAYHPLCHLEIHEQDGLKELHPIETILVGA  120 (357)
T ss_dssp             HHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHHHHHTC------CEEEECTTCHHHHSSTTHHHHHSSCEEEECSC
T ss_pred             HHHHHHHHHHhCCC---cEEEecCcHHHHHHHHHHHhhcCCC------cEEEecccceeeeeccchhhhccCcEEEEecC
Confidence            34556777777763   3466688899999999999888761      138888888776543   35566899888885


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                       +++.+|+++++++.  +++++++++|+||+ |.+   +++++|.++|++||+++|+|++|......+.   +..  ..+
T Consensus       121 -~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~---~~~--~~~  192 (357)
T 3lws_A          121 -ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYY---EKT--AAE  192 (357)
T ss_dssp             -TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHH---TCC--HHH
T ss_pred             -CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhc---CCC--hHH
Confidence             55679999999883  48999999999998 887   4699999999999999999999873322211   211  111


Q ss_pred             CCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        331 FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       331 ~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      +. .++|+++.++||++.+|.| |+ ++.++++.+.
T Consensus       193 ~~-~~~d~~~~s~sK~~~~~~g-g~-~~~~~~~~~~  225 (357)
T 3lws_A          193 IA-GLFDSIYISFYKGLGGIAG-AI-LAGPAAFCQT  225 (357)
T ss_dssp             HH-TTSSEEEEESSSTTCCSSC-EE-EEECHHHHHH
T ss_pred             HH-hcCCEEEEeccccCCCCce-EE-EEcCHHHHHH
Confidence            11 3468889999998658877 77 5566666544

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.79  E-value=2.2e-18  Score=174.93  Aligned_cols=176  Identities=13%  Similarity=0.071  Sum_probs=123.4

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH----HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD----YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~----~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ++++.++++++.   +++++|+|||+|+.++++++++    +++.     +..|+++.+.|..+..++...|.+++.++.
T Consensus        80 ~l~~~la~~~~~---~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~-----~~~viv~~~~~~~~~~~~~~~g~~~~~~~~  151 (467)
T 1ax4_A           80 DLKDKAKELFNY---DYIIPAHQGRGAENILFPVLLKYKQKEGKA-----KNPVFISNFHFDTTAAHVELNGCKAINIVT  151 (467)
T ss_dssp             HHHHHHHHHHCC---CEEEEESSHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEESSCCHHHHHHHHHTTCEEEECBC
T ss_pred             HHHHHHHHHcCC---CcEEEcCCcHHHHHHHHHHHHHhhccCCCc-----cceEEEeccccchhhHHHhccCCceecccc
Confidence            445667777765   3799999999999999999987    3331     112777865667778888888999887764


Q ss_pred             C----------CCccccHHHHHHHhhc----CceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccc-hh
Q psy10210        255 T----------SSYTVDLAALQSAITG----NTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGG-FL  315 (435)
Q Consensus       255 ~----------~~~~~d~~~l~~~i~~----~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~-~~  315 (435)
                      +          .++.+|++++++++++    ++++|++++|+||+ |.+   +++++|.++|++||+++|+|++++. ..
T Consensus       152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~  231 (467)
T 1ax4_A          152 EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA  231 (467)
T ss_dssp             GGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH
T ss_pred             cccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc
Confidence            2          1457899999999974    68999999999999 776   6789999999999999999998653 11


Q ss_pred             h-hcc---cccCCCCCCCCCC---CCCccEEEecCCCCCCccCCcEEEEEeCC-cccc
Q psy10210        316 A-PFM---SAAGYPLPPFDFS---LPGVTSISVDTHKYGFTPKGSSVVLYRDL-KYKH  365 (435)
Q Consensus       316 ~-~~~---~~~g~~~~~~d~~---~~gvd~~~~s~hK~~~~p~g~g~il~~~~-~~~~  365 (435)
                      . .+.   ...+..  ..++.   ...+|++++|+||+++.|.| |+++.+++ ++.+
T Consensus       232 ~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~  286 (467)
T 1ax4_A          232 YFIKARDPKYKNAT--IKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFT  286 (467)
T ss_dssp             HHHHHHCGGGTTCC--HHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHH
T ss_pred             hhccccccccCCCc--hhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHH
Confidence            1 000   011110  00110   02368899999998655544 56455546 6544

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.79  E-value=2.2e-18  Score=172.34  Aligned_cols=219  Identities=15%  Similarity=0.135  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh-HHHHH--HHcCC--EEEE
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA-FDKAA--NYFGM--KVKH  251 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~-~~~~~--~~~g~--~v~~  251 (435)
                      +...++++++++|.+.  ..++++||++|+..+++++.++++.        |++++|+|++ +...+  ...|.  +++.
T Consensus        80 ~~~a~~~~~~~~~~~~--~~v~~~~Gs~a~~~al~~~~~~gd~--------Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~  149 (425)
T 3ecd_A           80 EALAIERVKRLFNAGH--ANVQPHSGAQANGAVMLALAKPGDT--------VLGMSLDAGGHLTHGAKPALSGKWFNALQ  149 (425)
T ss_dssp             HHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHCCTTCE--------EEEECC------------------CEEEE
T ss_pred             HHHHHHHHHHHhCCCC--ceeecCchHHHHHHHHHHccCCCCE--------EEEcccccccceecchhhhhcccceeeee
Confidence            3344466777777654  3356889999999999998776665        9999999988 22222  24455  4555


Q ss_pred             EecC-CCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        252 IRLT-SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       252 vp~~-~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      ++.+ +++.+|++++++++. .++++|++++|+||  ...++++|.++|++||+++|+|++|+.+....    +.....+
T Consensus       150 ~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~----~~~~~~~  223 (425)
T 3ecd_A          150 YGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAA----GRHANPV  223 (425)
T ss_dssp             ECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHT----TSSCCGG
T ss_pred             cCCCcccCccCHHHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhc----ccccCch
Confidence            6655 457899999999997 58999999988884  67899999999999999999999965443311    1110111


Q ss_pred             CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH---H
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF---E  406 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~---~  406 (435)
                          ..+|+++.|+||++.||. .|+++.+++++.+.......   .+      ..++.....++++.+++.....   +
T Consensus       224 ----~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~a~~~a~~~~~~~~~~  289 (425)
T 3ecd_A          224 ----EHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKINSAVF---PG------LQGGPLMHVIAGKAVAFGEALTDDFK  289 (425)
T ss_dssp             ----GTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHHHHC--------------CCCHHHHHHHHHHHHHHTSHHHH
T ss_pred             ----hcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHHhhhC---cc------ccCCccHHHHHHHHHHHHHHHHHhHH
Confidence                137899999999965665 48867665555433211111   11      1112223333444445544332   3


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q psy10210        407 AQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       407 g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+.++.++..+.+.+.+++
T Consensus       290 ~~~~~~~~~~~~l~~~L~~  308 (425)
T 3ecd_A          290 TYIDRVLANAQALGDVLKA  308 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            5556666666666666655

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.79  E-value=3.6e-18  Score=172.88  Aligned_cols=255  Identities=13%  Similarity=0.023  Sum_probs=167.7

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+..+      .......+...++++++++.++.+.+  +++|+||+||+..++++++..... +|.
T Consensus        66 ~~p~v~~A~~~~~~~~~~------~~~~~~~~~~~~la~~l~~~~~~~~~--v~~~~ggseA~~~al~~~~~~~~~-~g~  136 (452)
T 3n5m_A           66 GRKELAEAAYKQLQTLSY------FPMSQSHEPAIKLAEKLNEWLGGEYV--IFFSNSGSEANETAFKIARQYYAQ-KGE  136 (452)
T ss_dssp             CCHHHHHHHHHHHTTCCC------CCTTSEEHHHHHHHHHHHHHHTSCEE--EEEESSHHHHHHHHHHHHHHHHHT-TTC
T ss_pred             CCHHHHHHHHHHHHhcCC------cccccCCHHHHHHHHHHHHhCCCCce--EEEeCchHHHHHHHHHHHHHHHHh-cCC
Confidence            378999999998876322      11223446677888899999876543  999999999999999999855322 111


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCcc------------ccHHHHHHHhh----cCc
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYT------------VDLAALQSAIT----GNT  273 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~------------~d~~~l~~~i~----~~~  273 (435)
                       ++++|++.+++|+++...+...+.             ....+|......            .++++|+++++    +++
T Consensus       137 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~  216 (452)
T 3n5m_A          137 PHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETI  216 (452)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGE
T ss_pred             CCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCE
Confidence             346799999999886555444422             244555421111            11899999987    567


Q ss_pred             eEEEEeCC-CCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210        274 VMLVGSMP-NFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY  346 (435)
Q Consensus       274 ~~v~~~~p-~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~  346 (435)
                      ++|+++.+ +| +|.+.+    +++|.++|++||+++|+||+|++|...     |   ..+.....+  .|++++|  |.
T Consensus       217 ~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~-----g---~~~~~~~~~~~~di~t~s--K~  285 (452)
T 3n5m_A          217 AAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRT-----G---KAFGFMNYDVKPDIITMA--KG  285 (452)
T ss_dssp             EEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSGGGGTTCCCSEEEEC--GG
T ss_pred             EEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcc-----c---ccchhhhcCCCCCEEeec--cc
Confidence            88888888 89 998744    999999999999999999999987431     2   122222223  4777766  76


Q ss_pred             CCcc-CCcEEEEEeCCcccccccc---ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q psy10210        347 GFTP-KGSSVVLYRDLKYKHCQYF---VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSC  422 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~~~~~~~~---~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~  422 (435)
                      +.++ .++|+++.+ +++.+....   ......++++.       .+..+.+++.++++.+..+++.+++++..+.+++.
T Consensus       286 l~~G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~~-------~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~  357 (452)
T 3n5m_A          286 ITSAYLPLSATAVK-REIYEAFKGKGEYEFFRHINTFG-------GNPAACALALKNLEIIENENLIERSAQMGSLLLEQ  357 (452)
T ss_dssp             GGTTSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSST-------TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             ccCCCcceEEEEEC-HHHHHHHhhccCCCCccccCCCC-------CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence            4444 678986665 455433211   01111222221       22334456677777776777888888888887777


Q ss_pred             HHhc
Q psy10210        423 LQNL  426 (435)
Q Consensus       423 ~~~l  426 (435)
                      ++++
T Consensus       358 L~~~  361 (452)
T 3n5m_A          358 LKEE  361 (452)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.78  E-value=4.5e-18  Score=171.69  Aligned_cols=248  Identities=17%  Similarity=0.079  Sum_probs=165.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+........    .+  ..+...++++.+++++|.   +++++|+||++|+..++++++.....++|.
T Consensus        93 ~~p~v~~Ai~~~~~~~~~~~~----~~--~~~~~~~l~~~la~~~g~---~~v~~~~sGseA~~~al~~~~~~~~~~~g~  163 (439)
T 2oat_A           93 CHPKIVNALKSQVDKLTLTSR----AF--YNNVLGEYEEYITKLFNY---HKVLPMNTGVEAGETACKLARKWGYTVKGI  163 (439)
T ss_dssp             TCHHHHHHHHHHHTTCSCCCT----TS--EESSHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHhcCcccC----cc--CCHHHHHHHHHHHHhcCC---CEEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence            478999999998876422111    11  123445666777777763   389999999999999999987543322333


Q ss_pred             C--CCeEEEeCCCchhH-HHHHHHcC------------CEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCccc
Q psy10210        224 S--LPEIVLPTTAHPAF-DKAANYFG------------MKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGT  287 (435)
Q Consensus       224 ~--~~~viv~~~~~~~~-~~~~~~~g------------~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~  287 (435)
                      .  +++|++.+++|++. ..++...|            .++..+|.     .|++++++++. +++++|+++..++++|.
T Consensus       164 ~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~~~vi~ep~~~~~G~  238 (439)
T 2oat_A          164 QKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNVAAFMVEPIQGEAGV  238 (439)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTEEEEEECSSBTTTTS
T ss_pred             CCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCEEEEEEECCCCCCCC
Confidence            1  35799999988774 34444444            45666764     28999999994 67888888777778897


Q ss_pred             cc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC--CCccEEEecCCCCCCcc-CCcEEEEEeC
Q psy10210        288 MD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL--PGVTSISVDTHKYGFTP-KGSSVVLYRD  360 (435)
Q Consensus       288 ~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~--~gvd~~~~s~hK~~~~p-~g~g~il~~~  360 (435)
                      +.    ++++|.++|++||+++|+||+|.+|...     |   ..+.+..  ...|++++  +|.+.++ .++|+++.++
T Consensus       239 ~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~-----g---~~~~~~~~~~~~Di~t~--sK~l~~G~~~~G~v~~~~  308 (439)
T 2oat_A          239 VVPDPGYLMGVRELCTRHQVLFIADEIQTGLART-----G---RWLAVDYENVRPDIVLL--GKALSGGLYPVSAVLCDD  308 (439)
T ss_dssp             BCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSSGGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECH
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEeccccCCccC-----C---cchhHHHhCCCCcEEEe--cccccCCCCCeEEEEECH
Confidence            63    8999999999999999999999875321     2   1222222  23577754  5975444 4589877664


Q ss_pred             CccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        361 LKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       361 ~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       ++.+..   .+...+++     ..+  +....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       309 -~~~~~l---~~~~~~~t-----~~~--~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l  363 (439)
T 2oat_A          309 -DIMLTI---KPGEHGST-----YGG--NPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL  363 (439)
T ss_dssp             -HHHTTS---CTTSSCCS-----STT--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS
T ss_pred             -HHHhcc---CCCCcccC-----CCc--CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence             444331   11112222     212  23344567778888776778888888888888877765

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.78  E-value=6.8e-19  Score=182.25  Aligned_cols=204  Identities=10%  Similarity=0.052  Sum_probs=144.1

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHH-HhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVF-GLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNG  190 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~  190 (435)
                      .+++.+++.+.+.+..         ..|....|.+++++.+++.+ ....... ..+                       
T Consensus       116 ~~~~~~~~al~~~~~~---------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~-----------------------  162 (546)
T 2zy4_A          116 LDPAAFLHEMVDGILG---------CNYPVPPRMLNISEKIVRQYIIREMGAD-AIP-----------------------  162 (546)
T ss_dssp             CCHHHHHHHHHHHHHT---------CSCCSSSSCCHHHHHHHHHHHHHHTTCT-TSC-----------------------
T ss_pred             CCChHHHHHHHHhhhc---------CCCCCCcCCHHHHHHHHHHHHHHhccCC-CCC-----------------------
Confidence            3556666666655431         13445557777887766554 3321110 000                       


Q ss_pred             CCCCceEEcCChHHHHHHHHHHH-----HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc--CCEEEEEecCC--Ccccc
Q psy10210        191 GPETCGCMTSGGTESIMMACKAY-----RDYAREEKGISLPEIVLPTTAHPAFDKAANYF--GMKVKHIRLTS--SYTVD  261 (435)
Q Consensus       191 ~~~~~~~~t~ggteai~~a~~a~-----~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~--g~~v~~vp~~~--~~~~d  261 (435)
                      .+.+++++|+|+++++.+++.++     .++++.        |++++|+|+.+...+...  |++++.+|+++  ++.+|
T Consensus       163 ~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~--------Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d  234 (546)
T 2zy4_A          163 SESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDK--------VAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYP  234 (546)
T ss_dssp             GGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCE--------EEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCC
T ss_pred             CCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCE--------EEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCC
Confidence            12348999999999999999885     344444        999999999999886654  68899999863  46799


Q ss_pred             HHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHH--HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        262 LAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLG--EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       262 ~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la--~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      ++++++++++++++|++++|+||||.+   +++++|+++|  +++|+++|+|++|+++...        ..++.-...+.
T Consensus       235 ~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~--------~~s~~~~~~~~  306 (546)
T 2zy4_A          235 DSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD--------FQSLFAICPEN  306 (546)
T ss_dssp             HHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT--------CCCHHHHCGGG
T ss_pred             HHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc--------CcCHHHhCCCC
Confidence            999999888889999999999999998   4578889999  7899999999999987531        01111111245


Q ss_pred             cEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210        337 TSISVDTHKYGF-TPKGSSVVLYRDLKYK  364 (435)
Q Consensus       337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~  364 (435)
                      ++++.|++|..+ .+..+|+++..++++.
T Consensus       307 ~i~~~S~SK~~g~~GlRiG~~~~~~~~l~  335 (546)
T 2zy4_A          307 TLLVYSFSKYFGATGWRLGVVAAHQQNVF  335 (546)
T ss_dssp             EEEEEESTTTTTCGGGCEEEEEEESSCHH
T ss_pred             EEEEEeCccccCCCCcceEEEEECCHHHH
Confidence            788889999842 2345899777765443

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.77  E-value=6.7e-18  Score=170.77  Aligned_cols=258  Identities=14%  Similarity=0.080  Sum_probs=157.4

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-  223 (435)
                      +|++.+++.+.+.+.....     ......+...+++++++++++... +++++|+||++|+..++++++.+... .|. 
T Consensus        62 ~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~~al~~~~~~~~~-~G~~  134 (448)
T 3dod_A           62 KKELDDAIKKQLGKIAHST-----LLGMTNVPATQLAETLIDISPKKL-TRVFYSDSGAEAMEIALKMAFQYWKN-IGKP  134 (448)
T ss_dssp             CHHHHHHHHHHHTTCSCCC-----CSSSEEHHHHHHHHHHHHHSCTTE-EEEEEESSHHHHHHHHHHHHHHHHHH-TTCT
T ss_pred             CHHHHHHHHHHHHhccCcc-----ccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCchHHHHHHHHHHHHHHHHh-hCCC
Confidence            7889999988887532211     122334566678888888886544 48999999999999999999876322 221 


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccc-----------cHHHHHHHhh---cCceEE
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTV-----------DLAALQSAIT---GNTVML  276 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~-----------d~~~l~~~i~---~~~~~v  276 (435)
                      .+++|++.+++|++....+...+.             .+..+|.+..++.           |++++++++.   +++++|
T Consensus       135 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v  214 (448)
T 3dod_A          135 EKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAAL  214 (448)
T ss_dssp             TCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred             CCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEE
Confidence            246799999999886544433321             2344554433322           5889999886   467788


Q ss_pred             EEeCCC-CCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCc
Q psy10210        277 VGSMPN-FPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFT  349 (435)
Q Consensus       277 ~~~~p~-nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~  349 (435)
                      +++.++ +++|.+.+    +++|.++|++||+++|+||+|++|...     |   ..+.....+  .|++++|  |.+.+
T Consensus       215 i~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~-----g---~~~a~~~~~~~~di~t~s--K~l~~  284 (448)
T 3dod_A          215 SIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRT-----G---KMFACEHENVQPDLMAAG--KGITG  284 (448)
T ss_dssp             EEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSSGGGGGTCCCSEEEEC--GGGGT
T ss_pred             EEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcc-----c---chhhhhhcCCCCCEEEec--ccccC
Confidence            888887 88887733    999999999999999999999987431     2   122222222  4777765  87545


Q ss_pred             c-CCcEEEEEeCCcccccccc---ccC-CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        350 P-KGSSVVLYRDLKYKHCQYF---VTS-DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       350 p-~g~g~il~~~~~~~~~~~~---~~~-~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                      + .++|+++.++ ++.+....   ... ...++++       +-+....+++.++++.+..+++.+++++..+.+++.++
T Consensus       285 G~~~ig~v~~~~-~~~~~~~~~~~~~~~~~~~~t~-------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~  356 (448)
T 3dod_A          285 GYLPIAVTFATE-DIYKAFYDDYENLKTFFHGHSY-------TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQ  356 (448)
T ss_dssp             TSSCCEEEEEEH-HHHHTTCSCGGGCCCCCCCCTT-------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             CcCceEEEEECH-HHHHHhhhccccCCcccccCCC-------CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            5 3778866654 44433211   000 1122221       11233445677777777667778888888777777766


Q ss_pred             hcC
Q psy10210        425 NLS  427 (435)
Q Consensus       425 ~l~  427 (435)
                      ++.
T Consensus       357 ~l~  359 (448)
T 3dod_A          357 DLH  359 (448)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            543

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.77  E-value=7.1e-18  Score=170.58  Aligned_cols=169  Identities=13%  Similarity=0.137  Sum_probs=122.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH-HHH----HHHcCCEE
Q psy10210        175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF-DKA----ANYFGMKV  249 (435)
Q Consensus       175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~-~~~----~~~~g~~v  249 (435)
                      .++...++++++++|.+.  ..++++||++|+..++++++++++.        |++++++|.++ ...    ..-.+..+
T Consensus        91 ~~e~~a~~~la~~~g~~~--~~v~~~sGs~a~~~a~~~~~~~Gd~--------Vl~~~~~~~~~~~~~~~~~~~g~~~~~  160 (447)
T 3h7f_A           91 VVENLARDRAKALFGAEF--ANVQPHSGAQANAAVLHALMSPGER--------LLGLDLANGGHLTHGMRLNFSGKLYEN  160 (447)
T ss_dssp             HHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHCCTTCE--------EEEECGGGTCCGGGTCTTSHHHHSSEE
T ss_pred             HHHHHHHHHHHHHcCCCc--eEEEeCCHHHHHHHHHHHhcCCCCE--------EEecCcccccccchhhhhhhcCCeeEE
Confidence            334334477888888764  3444788899999999999888776        99999998762 111    11134566


Q ss_pred             EEEecC-CCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        250 KHIRLT-SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       250 ~~vp~~-~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      +.+|++ +++.+|++++++++. .++++|++++++||++.  ++++|.++|++||+++|+|++|......    .|....
T Consensus       161 ~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~----~g~~~~  234 (447)
T 3h7f_A          161 GFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVA----AGLHPS  234 (447)
T ss_dssp             EEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHH----TTSSCC
T ss_pred             EEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhc----CCCCCC
Confidence            777776 567899999999995 47889999999998876  9999999999999999999997543321    121111


Q ss_pred             CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      ++    .++|+++.++||++.||.| |+++. ++++.+
T Consensus       235 ~~----~~~di~~~s~sK~l~G~~g-G~i~~-~~~~~~  266 (447)
T 3h7f_A          235 PV----PHADVVSTTVHKTLGGGRS-GLIVG-KQQYAK  266 (447)
T ss_dssp             ST----TTCSEEEEESSGGGCCCSC-EEEEE-CGGGHH
T ss_pred             CC----CCCcEEEecCCcCCCCCCe-EEEEE-CHHHHH
Confidence            12    3679999999998766776 77554 445443

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.77  E-value=5.6e-18  Score=170.75  Aligned_cols=251  Identities=13%  Similarity=-0.014  Sum_probs=159.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+......     ....+..+...+++++++++++...++++++|+||++|+..++++++....     
T Consensus        60 ~~p~v~~a~~~~~~~~~~~-----~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~-----  129 (439)
T 3dxv_A           60 GHPAIVAAVSAAAANPAGA-----TILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATG-----  129 (439)
T ss_dssp             SCHHHHHHHHHHHHSCSCS-----CSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHS-----
T ss_pred             CCHHHHHHHHHHHHhccCc-----cccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhC-----
Confidence            4788999998887764211     112334567778888999988654424899999999999999998754221     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CCEE--------------EEEecCCCccc-----cHHHHHHHh----hcCceEEEEe
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GMKV--------------KHIRLTSSYTV-----DLAALQSAI----TGNTVMLVGS  279 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~~v--------------~~vp~~~~~~~-----d~~~l~~~i----~~~~~~v~~~  279 (435)
                       +++|++.++.|++....+... +...              ..+|.+..+..     |++++++++    .+++++|+++
T Consensus       130 -~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~  208 (439)
T 3dxv_A          130 -RSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIE  208 (439)
T ss_dssp             -CCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred             -CCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEc
Confidence             235888888887654444333 3221              23343322222     799999999    4578899999


Q ss_pred             CCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEE
Q psy10210        280 MPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSV  355 (435)
Q Consensus       280 ~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~  355 (435)
                      .++|++|.+.+    +++|.++|++||+++|+||+|++|...     |.. ...+......|++++|  |...++.++|+
T Consensus       209 p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~-----g~~-~~~~~~~~~~di~s~s--K~~~~G~riG~  280 (439)
T 3dxv_A          209 PIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARS-----GRL-HCFEHEGFVPDILVLG--KGLGGGLPLSA  280 (439)
T ss_dssp             SSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTT-----SSS-SGGGGTTCCCSEEEEC--GGGGTTSCCEE
T ss_pred             cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-----chh-hHHHhcCCCCCEEEEc--chhcCCcceEE
Confidence            99999999866    999999999999999999999876321     210 0112222235777554  87544456788


Q ss_pred             EEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        356 VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       356 il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ++.+ +++.+..   .....++.     . +  +....+++.++++.+..+.+.+++++..+.+.+.+++
T Consensus       281 ~~~~-~~~~~~~---~~~~~~~t-----~-~--~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~  338 (439)
T 3dxv_A          281 VIAP-AEILDCA---SAFAMQTL-----H-G--NPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSE  338 (439)
T ss_dssp             EEEE-HHHHTSC---SSSSCCTT-----T-T--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEC-HHHHhhh---cCCCcCCC-----c-c--cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            6665 4544331   11111221     1 1  2223345666677665667777777777776666654

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.77  E-value=6.1e-18  Score=171.01  Aligned_cols=263  Identities=14%  Similarity=0.092  Sum_probs=164.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-  223 (435)
                      +|++.+++.+.+.... .+.+    .....+...++++.++++++.+.+ ++++|+||++|+.+++++++..... +|. 
T Consensus        68 ~~~v~~a~~~~~~~~~-~~~~----~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~ggsea~~~al~~~~~~~~~-~g~~  140 (449)
T 3a8u_X           68 RKEIQEAVAKQLSTLD-YSPG----FQYGHPLSFQLAEKITDLTPGNLN-HVFFTDSGSECALTAVKMVRAYWRL-KGQA  140 (449)
T ss_dssp             CHHHHHHHHHHTTTCS-CCCS----SSCCCHHHHHHHHHHHTTSSTTEE-EEEEESSHHHHHHHHHHHHHHHHHH-TTCT
T ss_pred             CHHHHHHHHHHHHhCC-Cccc----cccCCHHHHHHHHHHHHhCCCCCC-EEEEcCcHHHHHHHHHHHHHHHHHh-cCCC
Confidence            6788888888776532 1111    022334556777888888876544 8999999999999999998764322 333 


Q ss_pred             CCCeEEEeCCCchhHH-HHHHHcCC------------EEEEEecCCCcc-----cc--------HHHHHHHhh----cCc
Q psy10210        224 SLPEIVLPTTAHPAFD-KAANYFGM------------KVKHIRLTSSYT-----VD--------LAALQSAIT----GNT  273 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~-~~~~~~g~------------~v~~vp~~~~~~-----~d--------~~~l~~~i~----~~~  273 (435)
                      ++++|++.+++|++.. .++...|.            .+..++++..+.     +|        +++++++++    +++
T Consensus       141 ~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~  220 (449)
T 3a8u_X          141 TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNI  220 (449)
T ss_dssp             TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGE
T ss_pred             CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCE
Confidence            2457999999988753 34444431            355666542221     46        999999987    466


Q ss_pred             eEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC--CCccEEEecCCCCC
Q psy10210        274 VMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL--PGVTSISVDTHKYG  347 (435)
Q Consensus       274 ~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~--~gvd~~~~s~hK~~  347 (435)
                      ++|+++..+|++|.+.+    +++|.++|++||+++|+||+|++|...     |   ..+.+..  ...|++++|  |.+
T Consensus       221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~-----g---~~~~~~~~~~~~di~s~s--K~l  290 (449)
T 3a8u_X          221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRT-----G---SMFGADSFGVTPDLMCIA--KQV  290 (449)
T ss_dssp             EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSHHHHHTCCCSEEEEC--GGG
T ss_pred             EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc-----C---cchhhhhcCCCCCEEEEc--ccc
Confidence            77777766678998766    999999999999999999999876321     1   1111111  124777554  874


Q ss_pred             Ccc-CCcEEEEEeCCccccccccccCCCCCCCC-CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        348 FTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNY-GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       348 ~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~-~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+. ..+|+++.++ ++.+........+....+ ...+.  +-+....+++.++++.+..+++.+++++..+.+.+.+++
T Consensus       291 ~~G~~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~t~--~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~  367 (449)
T 3a8u_X          291 TNGAIPMGAVIAST-EIYQTFMNQPTPEYAVEFPHGYTY--SAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG  367 (449)
T ss_dssp             GTTSSCCEEEEEEH-HHHHHHHTCSSCTTSCSSCCCCTT--TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCceEEEEECH-HHHHHhhccCcccccccccccCCC--cccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            332 3488877764 544331111000000000 00111  122333456677777776667888888888888888876


Q ss_pred             cC
Q psy10210        426 LS  427 (435)
Q Consensus       426 l~  427 (435)
                      +.
T Consensus       368 l~  369 (449)
T 3a8u_X          368 IK  369 (449)
T ss_dssp             TT
T ss_pred             Hh
Confidence            54

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.77  E-value=3.9e-18  Score=169.97  Aligned_cols=159  Identities=19%  Similarity=0.175  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH-----HHcCCEEEEE
Q psy10210        178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA-----NYFGMKVKHI  252 (435)
Q Consensus       178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~-----~~~g~~v~~v  252 (435)
                      .++++.++++.|.+   ..+++++|++|+.++ .++.++++.        |+++++.|.+....+     ...|++++.+
T Consensus        70 ~~l~~~la~l~g~~---~~~~~~sG~~Ai~~~-~~l~~~gd~--------Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v  137 (400)
T 3nmy_A           70 FAYERCVAALEGGT---RAFAFASGMAATSTV-MELLDAGSH--------VVAMDDLYGGTFRLFERVRRRTAGLDFSFV  137 (400)
T ss_dssp             HHHHHHHHHHHTCS---EEEEESSHHHHHHHH-HTTSCTTCE--------EEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred             HHHHHHHHHHhCCC---CEEEecCHHHHHHHH-HHHcCCCCE--------EEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence            34555677777764   467777779999984 445555554        999999999765554     3359999999


Q ss_pred             ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      |.+     |++++++++++++++|++++|+||+|.+.++++|.++|++||+++|+|++|+.+...         .+++  
T Consensus       138 ~~~-----d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~---------~~~~--  201 (400)
T 3nmy_A          138 DLT-----DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ---------RPLS--  201 (400)
T ss_dssp             CTT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC---------CGGG--
T ss_pred             CCC-----CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC---------Chhh--
Confidence            864     899999999999999999999999999999999999999999999999999865431         1333  


Q ss_pred             CCCccEEEecCCCCCCcc-CCc-E-EEEEeCCcccc
Q psy10210        333 LPGVTSISVDTHKYGFTP-KGS-S-VVLYRDLKYKH  365 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~~p-~g~-g-~il~~~~~~~~  365 (435)
                       .|+|+++.|++|++.+| ... | +++.+++++.+
T Consensus       202 -~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~  236 (400)
T 3nmy_A          202 -LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAE  236 (400)
T ss_dssp             -GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHH
T ss_pred             -cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHH
Confidence             37899999999997665 223 5 45656665543

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.77  E-value=7.6e-18  Score=170.98  Aligned_cols=256  Identities=14%  Similarity=0.034  Sum_probs=166.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+......    ...+..+...+++++++++++.+.+ ++++|+||+||+..++++++..... +|.
T Consensus        68 ~~p~v~~A~~~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~~~~~~~-~v~~~~gGseA~~~al~~~~~~~~~-~g~  141 (460)
T 3gju_A           68 GRQKIADAIATQAKNLAYYHA----YVGHGTEASITLAKMIIDRAPKGMS-RVYFGLSGSDANETNIKLIWYYNNV-LGR  141 (460)
T ss_dssp             CCHHHHHHHHHHHHHHSCCCC----CTTCCCHHHHHHHHHHHHHSCTTEE-EEEEESSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             CCHHHHHHHHHHHHhcccccc----ccccCCHHHHHHHHHHHhhCCCCcC-EEEEeCchHHHHHHHHHHHHHHHHh-cCC
Confidence            378999999988876432111    1223345667788888888765544 8999999999999999999876543 343


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcC-------------CEEEEEecCCCc-----ccc--------HHHHHHHhh----cC
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFG-------------MKVKHIRLTSSY-----TVD--------LAALQSAIT----GN  272 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g-------------~~v~~vp~~~~~-----~~d--------~~~l~~~i~----~~  272 (435)
                       .+++|++.+++|+++...+...+             ..+..+|....+     ..+        ++++++++.    ++
T Consensus       142 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~  221 (460)
T 3gju_A          142 PEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPET  221 (460)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             CCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCC
Confidence             35679999999988655544432             135666643211     122        688998886    56


Q ss_pred             ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC--CCccEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL--PGVTSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~--~gvd~~~~s~hK~  346 (435)
                      +++|+++.+++++|.+.+    +++|.++|++||+++|+||+|++|...     |   ..+....  ...|++++|  |.
T Consensus       222 ~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~-----g---~~~~~~~~~~~pdi~t~s--K~  291 (460)
T 3gju_A          222 IAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRL-----G---TMFGSDHYGIKPDLITIA--KG  291 (460)
T ss_dssp             EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSCHHHHHTCCCSEEEEC--GG
T ss_pred             EEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc-----c---ccchHhhcCCCCCeeeee--hh
Confidence            788888888888888633    999999999999999999999987431     1   1111111  124777765  87


Q ss_pred             CCcc-CCcEEEEEeCCccccccccc----cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        347 GFTP-KGSSVVLYRDLKYKHCQYFV----TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~~~~~~~~~----~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                      +.++ .++|+++.++ ++.+.....    .....++++.     +  +..+.+++.++++.+..+++.+++++..+.+++
T Consensus       292 l~gG~~~lg~v~~~~-~i~~~~~~~~~~~~~~~~~~t~~-----~--~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~  363 (460)
T 3gju_A          292 LTSAYAPLSGVIVAD-RVWQVLVQGSDKLGSLGHGWTYS-----A--HPICVAAGVANLELIDEMDLVTNAGETGAYFRA  363 (460)
T ss_dssp             GTTTSSCCEEEEEEH-HHHHHHHHHHHHHCSCSCCCTTT-----T--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             hcCCCCCeEEEEECH-HHHHHHhcccccccccccCCCCC-----C--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            5444 5778866654 443321100    1111222221     1  223345677778777667778888877777766


Q ss_pred             HH
Q psy10210        422 CL  423 (435)
Q Consensus       422 ~~  423 (435)
                      .+
T Consensus       364 ~l  365 (460)
T 3gju_A          364 EL  365 (460)
T ss_dssp             HH
T ss_pred             HH
Confidence            66

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.77  E-value=6.9e-18  Score=165.08  Aligned_cols=171  Identities=12%  Similarity=0.146  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEEe
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHIR  253 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~vp  253 (435)
                      ..++++++++++|.+.   .++++||++|+.++++++..+++.      ..|+++.+.|.....   .+...|++++.+|
T Consensus        50 ~~~l~~~la~~~~~~~---~i~~~~g~~a~~~a~~~~~~~g~~------~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~  120 (359)
T 3pj0_A           50 IEDFETKIAKILGKQS---AVFFPSGTMAQQIALRIWADRKEN------RRVAYHPLSHLEIHEQDGLKELQQITPLLLG  120 (359)
T ss_dssp             HHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHHHHHTC------CEEEECTTCHHHHSSTTHHHHHHCCEEEECS
T ss_pred             HHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHHhcCCC------cEEEEeccceeeehhcchHHHhcCceEEecC
Confidence            4456667777777643   366688999999999999887764      125555566655432   2355699999988


Q ss_pred             cCCCccccHHHHHHHhhcCceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      . +++.+|+++++++ .+++++|++++|+||+ |.+   +++++|.++|++||+++|+|++|..+...+.   +..  +.
T Consensus       121 ~-~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~---~~~--~~  193 (359)
T 3pj0_A          121 T-ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFY---QKS--AE  193 (359)
T ss_dssp             C-TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHH---TCC--HH
T ss_pred             C-cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhh---CCC--HH
Confidence            7 5678999999998 7789999999999998 677   4466669999999999999999875543211   211  11


Q ss_pred             CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      ++. .++|+++.|+||++.+|.| |+ ++.++++.+.
T Consensus       194 ~~~-~~~d~~~~s~sK~~~~~~g-g~-~~~~~~l~~~  227 (359)
T 3pj0_A          194 EIC-ALFDSVYVSFYKGIGGIAG-AI-LAGNDDFVQE  227 (359)
T ss_dssp             HHH-TTCSEEEEESSSTTCCSSC-EE-EEECHHHHHH
T ss_pred             Hhh-ccCCEEEEeccccCCCcce-EE-EECCHHHHHH
Confidence            111 3578999999998667755 55 6666766544

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.77  E-value=3.5e-18  Score=173.45  Aligned_cols=260  Identities=15%  Similarity=0.046  Sum_probs=167.7

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+.....    .......+...+++++++++++.+.+ ++++|+||++|+..++++++..... +|.
T Consensus        67 ~~p~v~~A~~~~~~~~~~~~----~~~~~~~~~~~~la~~l~~~~~~~~~-~v~~~~ggseA~~~al~~~~~~~~~-~g~  140 (459)
T 4a6r_A           67 GRKDFAEAARRQMEELPFYN----TFFKTTHPAVVELSSLLAEVTPAGFD-RVFYTNSGSESVDTMIRMVRRYWDV-QGK  140 (459)
T ss_dssp             CCHHHHHHHHHHHHHCSCCC----TTSSSCCHHHHHHHHHHHHHSCTTCC-EEEEESSHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             CCHHHHHHHHHHHHhccccc----cccccCCHHHHHHHHHHHHhCCCCCC-EEEEeCchHHHHHHHHHHHHHHHHh-cCC
Confidence            37899999999887643111    11223345667788899999876555 8999999999999999999876543 343


Q ss_pred             -CCCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCC-----Ccccc--------HHHHHHHhh----cC
Q psy10210        224 -SLPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTS-----SYTVD--------LAALQSAIT----GN  272 (435)
Q Consensus       224 -~~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~-----~~~~d--------~~~l~~~i~----~~  272 (435)
                       .+++|++.+++|+++...+...+.             .+..+|...     ++ .|        ++++++++.    ++
T Consensus       141 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~  219 (459)
T 4a6r_A          141 PEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADK  219 (459)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             CCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCC
Confidence             356799999999986655544321             344555321     11 34        788888886    45


Q ss_pred             ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC--CCCccEEEecCCCC
Q psy10210        273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--LPGVTSISVDTHKY  346 (435)
Q Consensus       273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--~~gvd~~~~s~hK~  346 (435)
                      +++|+++.+++++|.+.+    +++|.++|++||+++|+||+|.+|...     |   ..+...  ....|++++|  |.
T Consensus       220 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~-----G---~~~~~~~~~~~pdi~t~s--K~  289 (459)
T 4a6r_A          220 VAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRT-----G---EWFGHQHFGFQPDLFTAA--KG  289 (459)
T ss_dssp             EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSSHHHHHTCCCSEEEEC--GG
T ss_pred             EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc-----c---ccchHhhcCCCCCeeehh--hh
Confidence            677777777777777654    999999999999999999999987431     2   111111  1134777776  86


Q ss_pred             CCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHH-
Q psy10210        347 GFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV-RYHFNYKSCL-  423 (435)
Q Consensus       347 ~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~-~~~~~~~~~~-  423 (435)
                      +.++ .++|+++.+ +++.+..........+++     .  +-+..+.+++.++++.+..+++.++++ +..+.+++.+ 
T Consensus       290 l~gg~~~lg~v~~~-~~i~~~~~~~~~~~~~~t-----~--~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~  361 (459)
T 4a6r_A          290 LSSGYLPIGAVFVG-KRVAEGLIAGGDFNHGFT-----Y--SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWR  361 (459)
T ss_dssp             GGTTSSCCEEEEEC-HHHHHHHHHHCTTHHHHH-----H--CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHH
T ss_pred             hcCCCCCccceeeC-HHHHHHhhcCCCcccCCC-----C--CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence            4443 578886664 454433110001011111     1  112333456677777776677888888 7777777776 


Q ss_pred             HhcCC
Q psy10210        424 QNLSD  428 (435)
Q Consensus       424 ~~l~~  428 (435)
                      +.+.+
T Consensus       362 ~~l~~  366 (459)
T 4a6r_A          362 ETFSR  366 (459)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            55543

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.76  E-value=1.6e-17  Score=165.84  Aligned_cols=218  Identities=14%  Similarity=0.124  Sum_probs=146.5

Q ss_pred             CCccccCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210        100 GLEYFLELP-SQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus       100 ~~~~~~~~P-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      .+++..+.| +. ..+..+.+.+.+...       .+...|....|.+++++++++++...... +.             
T Consensus        43 ~i~l~~g~~~d~-~~~~~v~~a~~~a~~-------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~-~~-------------  100 (409)
T 4eu1_A           43 KVNLSIGVYRDD-ADQPFVLECVKQATL-------GTNMDYAPVTGIASFVEEAQKLCFGPTCA-AL-------------  100 (409)
T ss_dssp             CEECCCSSCCCT-TSCCCCCHHHHTCCC-------CSCCCCCCTTCCHHHHHHHHHHHHCSSCH-HH-------------
T ss_pred             ceeeeeeEEECC-CCCEeecHHHHhcCc-------cccccCCCCCCcHHHHHHHHHHHcCCCch-hh-------------
Confidence            456666766 43 334456666655411       23445666678889999998877421000 00             


Q ss_pred             HHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHH---HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210        179 EVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYR---DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR  253 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~---~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp  253 (435)
                                  ++ +++  ..|.||++++.++...+.   ++++        +|++++|+|.++...++..|++++.+|
T Consensus       101 ------------~~-~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd--------~Vlv~~p~y~~~~~~~~~~g~~~~~~~  159 (409)
T 4eu1_A          101 ------------RD-GRIASCQTLGGTGALRIGGDLLNRFVANCN--------RIYGPDVGYPNHESIFAKAGMELTPYS  159 (409)
T ss_dssp             ------------HT-TCEEEEEESHHHHHHHHHHHHGGGTSSSCC--------EEEEESSCCTHHHHHHHHTTCEEEEEC
T ss_pred             ------------cc-CceeeeecccchHHHHHHHHHHHHhcCCCC--------EEEEeCCCcHhHHHHHHHcCCeEEEEE
Confidence                        02 256  458999999988765433   3334        599999999999999999999999999


Q ss_pred             cC--CCccccHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        254 LT--SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       254 ~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      ++  +++.+|+++++++++   ++++++++++|+||||.+   +++++|+++|++||+++|+|++|+++...-....+.+
T Consensus       160 ~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~  239 (409)
T 4eu1_A          160 YYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFV  239 (409)
T ss_dssp             CEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred             eecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHH
Confidence            83  567899999999996   356777789999999998   4577799999999999999999998764200000000


Q ss_pred             CCCCCC-CCCCccEEEecCCCCCC-ccCCcEEE--EEeCCc
Q psy10210        326 LPPFDF-SLPGVTSISVDTHKYGF-TPKGSSVV--LYRDLK  362 (435)
Q Consensus       326 ~~~~d~-~~~gvd~~~~s~hK~~~-~p~g~g~i--l~~~~~  362 (435)
                        ...+ ....-.+++.|++|.+. .+.++|++  ++.+++
T Consensus       240 --~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~  278 (409)
T 4eu1_A          240 --PRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAE  278 (409)
T ss_dssp             --HHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHH
T ss_pred             --HHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHH
Confidence              0001 11122456668889843 23457886  566665

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.76  E-value=9e-18  Score=168.24  Aligned_cols=250  Identities=13%  Similarity=0.013  Sum_probs=157.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+...... ....    ...+...++++.++++++.+.++++++|+||++|+.++++.++....      
T Consensus        59 ~~~v~~a~~~~~~~~~~~-~~~~----~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~------  127 (426)
T 1sff_A           59 HPKVVAAVEAQLKKLSHT-CFQV----LAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATK------  127 (426)
T ss_dssp             CHHHHHHHHHHTTTCSCC-CTTT----EECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHT------
T ss_pred             CHHHHHHHHHHHHhCCCc-cccc----cCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhC------
Confidence            677888888776543211 1111    12344566777888888323325899999999999999984321111      


Q ss_pred             CCeEEEeCCCchhHH-HHHHHcCCE-------------EEEEecCC-----CccccHHHHHHHhh-----cCceEEEEe-
Q psy10210        225 LPEIVLPTTAHPAFD-KAANYFGMK-------------VKHIRLTS-----SYTVDLAALQSAIT-----GNTVMLVGS-  279 (435)
Q Consensus       225 ~~~viv~~~~~~~~~-~~~~~~g~~-------------v~~vp~~~-----~~~~d~~~l~~~i~-----~~~~~v~~~-  279 (435)
                      +.+|++.+|.|+++. .++...|.+             ++.+|++.     ++.+|+++++++++     +++++|+++ 
T Consensus       128 ~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p  207 (426)
T 1sff_A          128 RSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEP  207 (426)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECS
T ss_pred             CCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEec
Confidence            114999999887744 456655543             77788753     23479999999986     467788775 


Q ss_pred             CCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcE
Q psy10210        280 MPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSS  354 (435)
Q Consensus       280 ~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g  354 (435)
                      +++| ||.+.+    +++|.++|++||+++|+||+|++|...     |.. ..++.....+|+++  ++|++ ++ ..+|
T Consensus       208 ~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~-----g~~-~~~~~~~~~~di~s--~sK~~-~~GlriG  277 (426)
T 1sff_A          208 VQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRT-----GTL-FAMEQMGVAPDLTT--FAKSI-AGGFPLA  277 (426)
T ss_dssp             BCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----SSS-SGGGGTTSCCSEEE--ECGGG-GTSSCCE
T ss_pred             ccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcc-----cch-hhhhhcCCCCCEEE--Ecccc-cCCCceE
Confidence            4567 996655    999999999999999999999976431     110 01122122357664  45984 44 3469


Q ss_pred             EEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        355 VVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       355 ~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +++.++ ++.+...   ....++.     .  +.+....+++.++++.+..+.+.+++++..+.+.+.++.+
T Consensus       278 ~~~~~~-~~~~~l~---~~~~~~~-----~--~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~  338 (426)
T 1sff_A          278 GVTGRA-EVMDAVA---PGGLGGT-----Y--AGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAI  338 (426)
T ss_dssp             EEEEEH-HHHTTSC---TTSBCCS-----S--SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcH-HHHhhhc---cCCcCcC-----C--CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            977765 4443211   1111111     1  1223334566667777766677888888888877777653

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.76  E-value=1.4e-17  Score=166.85  Aligned_cols=247  Identities=13%  Similarity=0.028  Sum_probs=155.2

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+.+.....   +....+  ..+...++++.+++.+|.+..+++++|+||+||+.+++++++...       
T Consensus        61 ~p~v~~a~~~~~~~~~~---~~~~~~--~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~-------  128 (419)
T 2eo5_A           61 HPEVIKIGIEQMQKLAH---AAANDF--YNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTG-------  128 (419)
T ss_dssp             CHHHHHHHHHHHTTSCC---CSCSCS--CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTS-------
T ss_pred             CHHHHHHHHHHHhhCcc---cccccc--CCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhh-------
Confidence            68899999888865321   110111  124456677888999987623489999999999999999876421       


Q ss_pred             CCeEEEeCCCchhHHH-HHHHcC-------------CEEEEEecCCCcc----------------ccHHHHH-HHhh---
Q psy10210        225 LPEIVLPTTAHPAFDK-AANYFG-------------MKVKHIRLTSSYT----------------VDLAALQ-SAIT---  270 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~-~~~~~g-------------~~v~~vp~~~~~~----------------~d~~~l~-~~i~---  270 (435)
                      +++|++++|.|+++.. +....|             .+++.+|.++++.                +|+++++ ++++   
T Consensus       129 ~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~  208 (419)
T 2eo5_A          129 RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV  208 (419)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC
T ss_pred             CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc
Confidence            2359999998876433 332221             3577888765432                4688999 8887   


Q ss_pred             --cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC
Q psy10210        271 --GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH  344 (435)
Q Consensus       271 --~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h  344 (435)
                        +++++|+++..+||+|.+.+    +++|.++|++||+++|+||+|++|...     |.. ..++......|++++|  
T Consensus       209 ~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~-----g~~-~~~~~~~~~~d~~t~s--  280 (419)
T 2eo5_A          209 PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRT-----GKL-FAIENFNTVPDVITLA--  280 (419)
T ss_dssp             CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----SSS-SGGGGGTCCCSEEEEC--
T ss_pred             CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccC-----cch-hhHHhcCCCCCEEEec--
Confidence              35666666555567897644    999999999999999999999877431     110 0112112235777655  


Q ss_pred             CCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210        345 KYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCL  423 (435)
Q Consensus       345 K~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~  423 (435)
                      |.+.++ .++|+++.++ ++. ..    ....++.     .  +-+..+.+++.++++.+. + +.+++++..+.+.+.+
T Consensus       281 K~~~~G~~riG~~~~~~-~~~-~~----~~~~~~t-----~--~~n~~~~~aa~aal~~~~-~-~~~~~~~~~~~l~~~L  345 (419)
T 2eo5_A          281 KALGGGIMPIGATIFRK-DLD-FK----PGMHSNT-----F--GGNALACAIGSKVIDIVK-D-LLPHVNEIGKIFAEEL  345 (419)
T ss_dssp             GGGGTTTSCCEEEEEEG-GGC-CC----------C-----C--CCCHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHH
T ss_pred             ccccCCccceEEEEEch-Hhh-cC----CcccCCC-----C--CCCHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHH
Confidence            764455 7889977665 443 21    1111211     1  112233345666666543 2 6777777777777666


Q ss_pred             Hhc
Q psy10210        424 QNL  426 (435)
Q Consensus       424 ~~l  426 (435)
                      +++
T Consensus       346 ~~~  348 (419)
T 2eo5_A          346 QGL  348 (419)
T ss_dssp             TTS
T ss_pred             HHh
Confidence            554

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.75  E-value=8.9e-18  Score=170.18  Aligned_cols=250  Identities=14%  Similarity=0.063  Sum_probs=158.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+....     .......+...+++++++++++.+..+++++|+||+||+..++++++....     
T Consensus        81 ~~p~v~~A~~~~~~~~~~~-----~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g-----  150 (453)
T 4ffc_A           81 SHPAVAAAIADQATHFTHT-----CFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATG-----  150 (453)
T ss_dssp             TCHHHHHHHHHHHHHCSCC-----TTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhcccc-----ccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcC-----
Confidence            3899999999988764211     111223456678888999998755445899999999999999998875321     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCC--------------EEEEEecCCCc----cc--------cHHHHHHHhhcCceEEE
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGM--------------KVKHIRLTSSY----TV--------DLAALQSAITGNTVMLV  277 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~--------------~v~~vp~~~~~----~~--------d~~~l~~~i~~~~~~v~  277 (435)
                       +++|++.+++|++....+...+.              .+..+|.+..+    ..        +++.+++++.+++.+++
T Consensus       151 -~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aav  229 (453)
T 4ffc_A          151 -RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAI  229 (453)
T ss_dssp             -CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred             -CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEE
Confidence             24699999999886555444321              46667664111    11        24667776655555555


Q ss_pred             EeCCCCCcc-ccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC--CCccEEEecCCCCCCcc
Q psy10210        278 GSMPNFPYG-TMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL--PGVTSISVDTHKYGFTP  350 (435)
Q Consensus       278 ~~~p~nptG-~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~--~gvd~~~~s~hK~~~~p  350 (435)
                      +..|+|++| .+.    .+++|.++|++||+++|+||+|.+|...     |   ..+....  ...|++++|  |.+.++
T Consensus       230 i~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~-----g---~~~a~~~~~~~pdi~t~s--K~~~~G  299 (453)
T 4ffc_A          230 IIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFART-----G---AWFASEHEGIVPDIVTMA--KGIAGG  299 (453)
T ss_dssp             EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSTHHHHTCCCSEEEEC--GGGGTT
T ss_pred             EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcc-----c---ccchhhhcCCCcchHhhh--hhhcCC
Confidence            556666665 443    3999999999999999999999887431     1   1111111  124777766  875445


Q ss_pred             CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        351 KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       351 ~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .++|+++.+ +++.+..   .+...+++++     +  +..+.+++.++++.+..+++.+++++..+.+++.+++
T Consensus       300 ~~~G~~~~~-~~i~~~~---~~~~~~~t~~-----~--~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~  363 (453)
T 4ffc_A          300 MPLSAVTGR-AELMDAV---YAGGLGGTYG-----G--NPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSA  363 (453)
T ss_dssp             SSCEEEEEE-HHHHTTS---CTTSSCCSSS-----S--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCeEEEEEC-HHHHhhh---cccCcCCCCC-----c--CHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            678986664 4544331   1111222221     1  2233456667777766667778887777776666654

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.75  E-value=1.4e-17  Score=167.50  Aligned_cols=252  Identities=13%  Similarity=-0.013  Sum_probs=160.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKG  222 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g  222 (435)
                      ++|++.+++.+.+....+.+   .   ....+...++++.++++++.+.+ ++++|+||++|+..++++++. ++     
T Consensus        60 ~~p~v~~a~~~~~~~~~~~~---~---~~~~~~~~~l~~~la~~~~~~~~-~v~~~~gg~ea~~~a~~~~~~~~~-----  127 (433)
T 1zod_A           60 CHPEIVSVIGEYAGKLDHLF---S---EMLSRPVVDLATRLANITPPGLD-RALLLSTGAESNEAAIRMAKLVTG-----  127 (433)
T ss_dssp             TCHHHHHHHHHHHHHCCCCC---T---TCCCHHHHHHHHHHHHHSCTTCC-EEEEESCHHHHHHHHHHHHHHHHT-----
T ss_pred             CCHHHHHHHHHHHHhCcccc---c---ccCCHHHHHHHHHHHHhCCCCcC-EEEEeCchHHHHHHHHHHHHHhhC-----
Confidence            37899999998887642211   1   11234566777888999987654 899999999999999998763 22     


Q ss_pred             CCCCeEEEeCCCchhHHHHHHHc------------CCEEEEEecCCC----c--------cccHHHHHHHhh----cCce
Q psy10210        223 ISLPEIVLPTTAHPAFDKAANYF------------GMKVKHIRLTSS----Y--------TVDLAALQSAIT----GNTV  274 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~~~~~~~~------------g~~v~~vp~~~~----~--------~~d~~~l~~~i~----~~~~  274 (435)
                        +++|++.+|.|++....+...            ...+..++++..    +        .+|+++++++++    ++++
T Consensus       128 --~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~  205 (433)
T 1zod_A          128 --KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLA  205 (433)
T ss_dssp             --CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEE
T ss_pred             --CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeE
Confidence              235999999988754433321            124555554321    1        246999999987    4667


Q ss_pred             EEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc
Q psy10210        275 MLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP  350 (435)
Q Consensus       275 ~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p  350 (435)
                      +|+++..+||+|.+.+    +++|.++|++||+++|+||+|++|...     |.. ..++......|++++|  |.+.++
T Consensus       206 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~-----g~~-~~~~~~~~~~di~s~s--K~~~~G  277 (433)
T 1zod_A          206 AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRT-----GTM-FACQRDGVTPDILTLS--KTLGAG  277 (433)
T ss_dssp             EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----SSS-STHHHHTCCCSEEEEC--HHHHTT
T ss_pred             EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcC-----chH-hHHhhcCCCCCEEEec--ccccCC
Confidence            7776655688997633    999999999999999999999976431     110 0111112234766655  874445


Q ss_pred             CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        351 KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       351 ~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .++|+++.++ ++.+.... .....+++     ..  .+....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       278 ~~ig~~~~~~-~~~~~~~~-~~~~~~~t-----~~--~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l  344 (433)
T 1zod_A          278 LPLAAIVTSA-AIEERAHE-LGYLFYTT-----HV--SDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDL  344 (433)
T ss_dssp             SSCEEEEECH-HHHHHHHH-TTCCCCCT-----TT--TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEEhH-HHHHhhcc-CCCCCCCC-----CC--cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            6789977654 55433111 11111121     11  122333456677776666677888888888777776654

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.75  E-value=1e-17  Score=168.49  Aligned_cols=245  Identities=11%  Similarity=0.021  Sum_probs=157.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.... .+       ....+...++++.+++.++ .. +++++|+|||||+..++++++....     
T Consensus        72 ~~p~v~~a~~~~~~~~~-~~-------~~~~~~~~~l~~~la~~~~-~~-~~v~~~~sGsea~~~ai~~a~~~~~-----  136 (434)
T 3l44_A           72 AHPHITKAITTAAENGV-LY-------GTPTALEVKFAKMLKEAMP-AL-DKVRFVNSGTEAVMTTIRVARAYTG-----  136 (434)
T ss_dssp             TCHHHHHHHHHHHHHCS-CC-------SSCCHHHHHHHHHHHHHCT-TC-SEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhCc-CC-------CCCCHHHHHHHHHHHHhCC-CC-CEEEEeCchHHHHHHHHHHHHHhhC-----
Confidence            37999999999887621 11       0112455667778888886 33 4899999999999999998875321     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCC--------------------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGM--------------------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~--------------------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~  280 (435)
                       +++|++.+++|+++...+...+.                    .+..+|.     -|++++++++.   +++++|+++.
T Consensus       137 -~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep  210 (434)
T 3l44_A          137 -RTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-----NNVETLKEALDKWGHEVAAILVEP  210 (434)
T ss_dssp             -CCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEEEEECS
T ss_pred             -CCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-----ccHHHHHHHHHhCCCCEEEEEEcC
Confidence             24599999998875443333221                    1222222     18899999887   4677787777


Q ss_pred             CCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEE
Q psy10210        281 PNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVV  356 (435)
Q Consensus       281 p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~i  356 (435)
                      +++++|.+.+    +++|.++|++||+++|+||+|++| ..     |.. ...+......|++++|  |.+.++.++|++
T Consensus       211 ~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~-----g~~-~~~~~~~~~~di~t~s--K~~~~G~~iG~~  281 (434)
T 3l44_A          211 IVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RF-----MYG-GAQDLLGVTPDLTALG--KVIGGGLPIGAY  281 (434)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TS-----SSS-CHHHHHTCCCSEEEEE--GGGGTTSSCEEE
T ss_pred             CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ec-----ccc-HHHHHcCCCCCeeehh--hhhcCCcCeeeE
Confidence            7777787765    999999999999999999999987 31     210 0011111224677665  765566788996


Q ss_pred             EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        357 LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       357 l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      + .++++.+........+.++++.       .+..+.+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       282 ~-~~~~i~~~~~~~~~~~~~~t~~-------~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~  343 (434)
T 3l44_A          282 G-GKKEIMEQVAPLGPAYQAGTMA-------GNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQ  343 (434)
T ss_dssp             E-ECHHHHTTBTTTSSBCCCCTTT-------TCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             E-EcHHHHHhhccCCCcccCCCCC-------cCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence            4 4555544321111122332221       223334566777777766777788877777777666553

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.75  E-value=2.1e-17  Score=165.84  Aligned_cols=244  Identities=10%  Similarity=-0.001  Sum_probs=158.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.....   +.     ...+...++++++++.++ ++ +++++|+||++|+..+++.++....     
T Consensus        69 ~~p~v~~a~~~~~~~~~~---~~-----~~~~~~~~la~~l~~~~~-~~-~~v~~~~ggsea~~~al~~a~~~~~-----  133 (427)
T 3fq8_A           69 AHPEVIEALKVAMEKGTS---FG-----APCALENVLAEMVNDAVP-SI-EMVRFVNSGTEACMAVLRIMRAYTG-----  133 (427)
T ss_dssp             TCHHHHHHHHHHHTTCSC---CS-----SCCHHHHHHHHHHHHHST-TC-SEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhCCC---cC-----CCCHHHHHHHHHHHHhCC-CC-CEEEEeCCHHHHHHHHHHHHHHhhC-----
Confidence            488999999988875321   11     134566778888999887 33 4899999999999999987764321     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHc-CC-------------------EEEEEecCCCccccHHHHHHHhhc---CceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYF-GM-------------------KVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~-g~-------------------~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~  280 (435)
                       +++|++.+++|++....+... +.                   .+..+|.+     |++++++++++   ++++|+++.
T Consensus       134 -~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~p  207 (427)
T 3fq8_A          134 -RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENPGEIAGVILEP  207 (427)
T ss_dssp             -CCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHSTTTEEEEEECS
T ss_pred             -CCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcC
Confidence             235888888887633222111 11                   13344422     89999999976   688888888


Q ss_pred             CCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEE
Q psy10210        281 PNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVV  356 (435)
Q Consensus       281 p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~i  356 (435)
                      +++++|.+.+    +++|.++|++||+++|+||+|++| ..     |.. ...+......|++++|  |.+.++.++|++
T Consensus       208 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~-----g~~-~~~~~~~~~~di~t~s--K~~~~G~~~G~~  278 (427)
T 3fq8_A          208 IVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RI-----AYG-GVQEKFGVTPDLTTLG--KIIGGGLPVGAY  278 (427)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TT-----BTT-HHHHHTTCCCSEEEEC--GGGGTTSSCEEE
T ss_pred             CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-cc-----Ccc-hhhHhcCCCCChhhhh--hhhhCCcceEEE
Confidence            8888998866    999999999999999999999977 31     100 0011111124777666  875444568886


Q ss_pred             EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        357 LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       357 l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      +. ++++.+........+.++.+       +.+..+.+++.++++.+..+++.+++++..+.+++.+++
T Consensus       279 ~~-~~~~~~~~~~~~~~~~~~t~-------~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~  339 (427)
T 3fq8_A          279 GG-KREIMQLVAPAGPMYQAGTL-------SGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLA  339 (427)
T ss_dssp             EE-CHHHHTTBTTTSSBCCCCTT-------TTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred             EE-cHHHHHhhccCCCccccCCC-------CcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            54 55555432211111222221       112334456777777776677888888887777766654

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.75  E-value=3.1e-17  Score=166.12  Aligned_cols=251  Identities=16%  Similarity=0.056  Sum_probs=155.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+....     .......+...+++++++++++....+++++|+|||||+..++++++....     
T Consensus        78 ~~p~v~~A~~~~~~~~~~~-----~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g-----  147 (451)
T 3oks_A           78 SAPKVVEAVRSQVGDFTHT-----CFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTH-----  147 (451)
T ss_dssp             TCHHHHHHHHHHHTTCSCC-----TTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhcccc-----cCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcC-----
Confidence            3789999999988763211     111223456678888999998754445899999999999999999876321     


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCC--------------EEEEEecCCCcc-------------ccHHHHHHHhh----c-
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGM--------------KVKHIRLTSSYT-------------VDLAALQSAIT----G-  271 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~--------------~v~~vp~~~~~~-------------~d~~~l~~~i~----~-  271 (435)
                       +++|++.+++|++....+...+.              .+..+|.+..+.             .+++.+++.+.    + 
T Consensus       148 -~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~  226 (451)
T 3oks_A          148 -KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGAD  226 (451)
T ss_dssp             -CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGG
T ss_pred             -CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCC
Confidence             23599999999886555444321              466777642111             13444444443    2 


Q ss_pred             CceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCC
Q psy10210        272 NTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHK  345 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK  345 (435)
                      ++++|+++..++..|.+.+    +++|.++|++||+++|+||+|++|...     |   ..+.....  ..|+++++  |
T Consensus       227 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~-----g---~~~~~~~~~~~pdi~t~s--K  296 (451)
T 3oks_A          227 NLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFART-----G---AMFACEHEGIDPDLIVTA--K  296 (451)
T ss_dssp             GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-----S---SSSGGGGGTCCCSEEEEC--G
T ss_pred             CEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcc-----c---cchhhhhcCCCCCeeeeh--h
Confidence            3455555554444555533    999999999999999999999887431     2   12222222  34777665  8


Q ss_pred             CCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        346 YGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       346 ~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      .+.++.++|+++.+ +++.+..   .+...++++       +-+..+.+++.++++.+..+++.+++++..+.+++.+++
T Consensus       297 ~l~~G~~iG~v~~~-~~~~~~~---~~~~~~~t~-------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  365 (451)
T 3oks_A          297 GIAGGLPLSAVTGR-AEIMDSP---HVSGLGGTY-------GGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGR  365 (451)
T ss_dssp             GGGTTSSCEEEEEE-HHHHTCS---CTTSBCCSS-------SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCcceEEEEEC-HHHHhhh---cCCCcCCCC-------CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            75555678986664 4544331   111122221       112233456667777766667778887777777666654


Q ss_pred             c
Q psy10210        426 L  426 (435)
Q Consensus       426 l  426 (435)
                      +
T Consensus       366 ~  366 (451)
T 3oks_A          366 L  366 (451)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.74  E-value=3.4e-18  Score=170.12  Aligned_cols=232  Identities=11%  Similarity=-0.056  Sum_probs=148.0

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEE-cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh-HHHHHHHc--
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCM-TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA-FDKAANYF--  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~-t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~-~~~~~~~~--  245 (435)
                      .+...++..++++++++++|.++++++++ |+|||+|+.++++++.+++         .+++..+.|.. ....+...  
T Consensus        73 ~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g---------v~~v~~~~~~~~~~~~~~~~~~  143 (398)
T 2fyf_A           73 QAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR---------SLHLTYGEFSAKFASAVSKNPF  143 (398)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC---------EEEEECSHHHHHHHHHHHHCTT
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC---------eEEEeCCHHHHHHHHHHHHhCC
Confidence            45666778899999999999975457888 9999999999999985332         13444444532 23345555  


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |++++.+|++.+...+.     .++++|++|++++++||||.+.++++|.++   +|+++|+|++|+.+..         
T Consensus       144 g~~~~~v~~~~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~---------  206 (398)
T 2fyf_A          144 VGEPIIITSDPGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGL---------  206 (398)
T ss_dssp             SCCCEEEECCTTCCCCC-----CCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTS---------
T ss_pred             CCceEEEecCCCCCCCc-----cccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCc---------
Confidence            88999999873332332     256789999999999999999888888877   8999999999976533         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc------cCCCC-CCCC----CCCccccCCCchHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV------TSDWP-GGNY----GSPSVSGSRSGGIIA  394 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~------~~~~~-gg~~----~~~~~~gsr~~~~ia  394 (435)
                        +++..  ++|+++.|+||++.+|.|+|+++.++ ++.+.....      .+.+. ++..    ......++.+...++
T Consensus       207 --~~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~  281 (398)
T 2fyf_A          207 --PVDIA--ETDAYYFAPQKNFASDGGLWLAIMSP-AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLA  281 (398)
T ss_dssp             --CCCGG--GCSEEEECTTSTTCSCSSEEEEEECH-HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHH
T ss_pred             --ccCcc--cCcEEEEecCcccCCCCceEEEEECH-HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHH
Confidence              33332  47999999999954444688866654 443221000      01111 1000    000111233333444


Q ss_pred             HHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210        395 TCWAAMMYFG----FEAQVWICVRYHFNYKSCLQNLSDLWLY  432 (435)
Q Consensus       395 ~~~a~l~~~g----~~g~~~~~~~~~~~~~~~~~~l~~l~~~  432 (435)
                      ++.++++.+.    .+...++.++..+.+.+.+++++++..+
T Consensus       282 a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~  323 (398)
T 2fyf_A          282 LLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPF  323 (398)
T ss_dssp             HHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred             HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceec
Confidence            5566666544    3445566666666677777776665544

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.73  E-value=3.6e-17  Score=165.53  Aligned_cols=255  Identities=13%  Similarity=0.034  Sum_probs=161.4

Q ss_pred             ChHhHH-H-HHHH---HHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhh
Q psy10210        144 YQQDLV-D-LLTE---VFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR  218 (435)
Q Consensus       144 g~~~l~-~-~i~~---~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~  218 (435)
                      ++|++. + ++.+   .+.....   ..+   ....+...++++.++++++....+++++|+||+||+..++++++....
T Consensus        71 ~~p~v~~~~A~~~~~~~~~~~~~---~~~---~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~  144 (449)
T 2cjg_A           71 NPPALVDDREFHAELMQAALNKP---SNS---DVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKS  144 (449)
T ss_dssp             SCHHHHTCHHHHHHHHHHHTCCC---CTT---TCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhcCC---CCc---ccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhc
Confidence            378999 8 9988   5554311   111   123345567778888888732334899999999999999998763322


Q ss_pred             h---hcCC---CCCeEEEeCCCchhHHHHHHH---------cCC-----EEEEEecCC--Cc--------cccHHHHHHH
Q psy10210        219 E---EKGI---SLPEIVLPTTAHPAFDKAANY---------FGM-----KVKHIRLTS--SY--------TVDLAALQSA  268 (435)
Q Consensus       219 ~---~~g~---~~~~viv~~~~~~~~~~~~~~---------~g~-----~v~~vp~~~--~~--------~~d~~~l~~~  268 (435)
                      .   ..|.   ++++||+.++.|+++...+..         .+.     ++..+|.++  ..        ..++++++++
T Consensus       145 ~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~  224 (449)
T 2cjg_A          145 RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAA  224 (449)
T ss_dssp             HHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHH
Confidence            1   0111   145799999988875432211         122     566666643  11        2567779998


Q ss_pred             hh---cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC--CCCccEE
Q psy10210        269 IT---GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--LPGVTSI  339 (435)
Q Consensus       269 i~---~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--~~gvd~~  339 (435)
                      ++   +++++|+++..+||+|.+.+    +++|.++|++||+++|+||+|+++...     |.   .+.+.  ....|++
T Consensus       225 i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~-----g~---~~~~~~~~~~~di~  296 (449)
T 2cjg_A          225 FETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLT-----GT---AWAYQQLDVAPDIV  296 (449)
T ss_dssp             HHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTT-----SS---SSTHHHHTCCCSEE
T ss_pred             HHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCcc-----Cc---ceeecccCCCceEE
Confidence            85   57888888887899997644    999999999999999999999976431     21   11111  1235777


Q ss_pred             EecCCCCCCccCCcEEEEEeCCcccccccc--ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210        340 SVDTHKYGFTPKGSSVVLYRDLKYKHCQYF--VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF  417 (435)
Q Consensus       340 ~~s~hK~~~~p~g~g~il~~~~~~~~~~~~--~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~  417 (435)
                      ++|  |.+  |  +|+++.++ ++.+....  ......++     +..+  +....+++.++++.+..+++.+++++..+
T Consensus       297 t~s--K~l--~--iG~~~~~~-~~~~~l~~~~~~~~~~~~-----t~~~--n~~~~~aa~aal~~~~~~~~~~~~~~~~~  362 (449)
T 2cjg_A          297 AFG--KKT--Q--VCGVMAGR-RVDEVADNVFAVPSRLNS-----TWGG--NLTDMVRARRILEVIEAEGLFERAVQHGK  362 (449)
T ss_dssp             EEC--GGG--S--SEEEEECG-GGGGSTTCTTTSTTSSCC-----SSSS--CHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             Eec--Ccc--c--EEEEEECH-HHhhhhhhcccCCccccc-----CCCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            665  874  4  68866654 55443110  01111111     2222  22334566677777766778888888888


Q ss_pred             HHHHHHHhc
Q psy10210        418 NYKSCLQNL  426 (435)
Q Consensus       418 ~~~~~~~~l  426 (435)
                      .+.+.++++
T Consensus       363 ~l~~~L~~l  371 (449)
T 2cjg_A          363 YLRARLDEL  371 (449)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888777654

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.73  E-value=9.8e-18  Score=166.61  Aligned_cols=175  Identities=14%  Similarity=0.082  Sum_probs=125.0

Q ss_pred             CcccccccCCh-----HhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHH
Q psy10210        135 GRVSGAVYYYQ-----QDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMA  209 (435)
Q Consensus       135 ~~~~~~~~~g~-----~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a  209 (435)
                      +...|....|.     +++++++++++..+..  .                         ..+++++++|+|+++++.++
T Consensus        55 ~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~--~-------------------------~~~~~~i~~t~G~~~al~~~  107 (391)
T 3bwn_A           55 LMSYFSDMTNLCWFLEPELEDAIKDLHGVVGN--A-------------------------ATEDRYIVVGTGSTQLCQAA  107 (391)
T ss_dssp             TCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCS--B-------------------------CCSSSEEEEEEHHHHHHHHH
T ss_pred             hhhcCCCCCCcccccCHHHHHHHHHHHHhcCC--C-------------------------CCCCCeEEEeCChHHHHHHH
Confidence            34556677787     9999999998874321  1                         12334899999999999999


Q ss_pred             HHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccccc
Q psy10210        210 CKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD  289 (435)
Q Consensus       210 ~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~  289 (435)
                      +.++.++++.    ..++|++++|+|+++...++..|++++.+++|.++ ++        .+++++|++++||||||.+-
T Consensus       108 ~~~l~~~Gd~----~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-l~--------~~~~k~v~l~~p~NPtG~~~  174 (391)
T 3bwn_A          108 VHALSSLARS----QPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWG-FD--------KKGPYIELVTSPNNPDGTIR  174 (391)
T ss_dssp             HHHHHHTSSS----SSEEEEECSSCCTHHHHHHHTTCBTTEEEEEESTT-CC--------CCSCEEEEEESSCTTTCCCC
T ss_pred             HHHhcCCCCC----CcceEEEcCCCchhHHHHHHHcCCeEEEecCCHHH-cC--------CCCCEEEEECCCCCCCchhH
Confidence            9999888771    00139999999999999999999999999886432 22        25789999999999999995


Q ss_pred             CHHHHHHHHHHcC--CcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210        290 DIGAIAKLGEKYG--IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH  365 (435)
Q Consensus       290 ~i~~i~~la~~~~--~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~  365 (435)
                      +  +|++  ++|+  +++|+|++|...          ...++.. ..+.++++.|++|. +++.|  +|+++..++++.+
T Consensus       175 ~--~l~~--~~~~~~~~ii~De~y~~~----------~~~~l~~-~~~~~i~~~S~SK~-~g~~GlRiG~~~~~~~~l~~  238 (391)
T 3bwn_A          175 E--TVVN--RPDDDEAKVIHDFAYYWP----------HYTPITR-RQDHDIMLFTFSKI-TGHAGSRIGWALVKDKEVAK  238 (391)
T ss_dssp             C--CCC-------CCCEEEEECTTCST----------TTSCCCC-CBCCSEEEEEHHHH-HSCGGGCEEEEEECCHHHHH
T ss_pred             H--HHHH--HhhcCCCEEEEeCCCCCC----------CCCcccc-CCCCeEEEEechhh-cCCCccceEEEEecCHHHHH
Confidence            4  4433  2255  999999999631          0112322 34568889999998 45444  5997765666544

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.72  E-value=8.1e-17  Score=161.84  Aligned_cols=244  Identities=13%  Similarity=0.051  Sum_probs=155.6

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+..... + .    +  ......++++.++++++ .. +++++|+||++|+..++++++....     
T Consensus        70 ~~p~v~~A~~~~~~~~~~-~-~----~--~~~~~~~l~~~la~~~~-~~-~~v~~~~~Gsea~~~ai~~a~~~~~-----  134 (429)
T 3k28_A           70 ANDRVVEALKAVAERGTS-F-G----A--PTEIENKLAKLVIERVP-SI-EIVRMVNSGTEATMSALRLARGYTG-----  134 (429)
T ss_dssp             SCHHHHHHHHHHHHHCSC-C-S----S--CCHHHHHHHHHHHHHST-TC-SEEEEESSHHHHHHHHHHHHHHHHT-----
T ss_pred             CCHHHHHHHHHHHhhCcC-c-C----C--CCHHHHHHHHHHHHhCC-CC-CEEEEeCChHHHHHHHHHHHHHhhC-----
Confidence            379999999998876321 1 0    1  12455667778888886 33 4899999999999999999876432     


Q ss_pred             CCCeEEEeCCCchhHHHHHHH-cCC-------------------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY-FGM-------------------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~-~g~-------------------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~  280 (435)
                       +++|++.+++|++....+.. .|.                   .+..+|.+     |++++++++.   +++++|+++.
T Consensus       135 -~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep  208 (429)
T 3k28_A          135 -RNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFGDDIACVIVEP  208 (429)
T ss_dssp             -CCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHGGGEEEEEECS
T ss_pred             -CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcC
Confidence             23588888888764433222 222                   22222221     7899999887   4677788877


Q ss_pred             CCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEE
Q psy10210        281 PNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVV  356 (435)
Q Consensus       281 p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~i  356 (435)
                      +++++|.+.+    +++|.++|++||+++|+||+|.+| ..     |... ..+......|++++|  |.+.++.++|++
T Consensus       209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~-----g~~~-~~~~~~~~~di~t~s--K~~~~G~~iG~~  279 (429)
T 3k28_A          209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RV-----AYNC-GQGYYGVTPDLTCLG--KVIGGGLPVGAY  279 (429)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TS-----STTH-HHHHHTCCCSEEEEC--GGGGTTSCCEEE
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-cc-----Ccch-HHHHhCCCCceehhh--hhhcCCCCeEEE
Confidence            7777888766    999999999999999999999877 31     1100 011111124677665  875555678986


Q ss_pred             EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        357 LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       357 l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +.+ +++.+........+.++++       +.+..+.+++.++++.+. +.+.+++++..+.+.+.++++
T Consensus       280 ~~~-~~~~~~~~~~~~~~~~~t~-------~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~  340 (429)
T 3k28_A          280 GGK-AEIMRQVAPSGPIYQAGTL-------SGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKA  340 (429)
T ss_dssp             EEC-HHHHTTBTTTSSBCCCCTT-------TTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEc-HHHHhhhccCCCccccCCC-------CCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            554 4554432111112233222       122334456677777766 777788887777777766654

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.71  E-value=1.5e-16  Score=159.91  Aligned_cols=247  Identities=11%  Similarity=0.023  Sum_probs=149.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+.+.+... ..       ...+...++++.++++++ .. +++++|+||+||+..+++.++....     
T Consensus        70 ~~p~v~~A~~~~~~~~~~-~~-------~~~~~~~~la~~l~~~~~-~~-~~v~~~~sGsea~~~al~~a~~~~~-----  134 (429)
T 4e77_A           70 NHPAIRQAVIEAVERGLS-FG-------APTEMEVKMAQLVTDLVP-TM-DMVRMVNSGTEATMSAIRLARGYTG-----  134 (429)
T ss_dssp             TCHHHHHHHHHHHTTCSC-CS-------SCCHHHHHHHHHHHHHST-TC-SEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhCcc-cC-------CCCHHHHHHHHHHHhhCC-CC-CEEEEeCcHHHHHHHHHHHHHHhhC-----
Confidence            379999999998876311 10       112566677888888886 33 4899999999999999998764321     


Q ss_pred             CCCeEEEeCCCchhHHHHHHH-cCCE--EEEEecCCCc------------cccHHHHHHHhhc---CceEEEEeCCCCCc
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY-FGMK--VKHIRLTSSY------------TVDLAALQSAITG---NTVMLVGSMPNFPY  285 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~-~g~~--v~~vp~~~~~------------~~d~~~l~~~i~~---~~~~v~~~~p~npt  285 (435)
                       +++|++.++.|++....+.. .+..  ....|.....            ..|++++++++++   ++++|+++..++++
T Consensus       135 -~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~  213 (429)
T 4e77_A          135 -RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNM  213 (429)
T ss_dssp             -CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTT
T ss_pred             -CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCC
Confidence             24589988888876542211 1111  1111111100            1278999999873   56666655555556


Q ss_pred             ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCccCCcEEEEEe
Q psy10210        286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTPKGSSVVLYR  359 (435)
Q Consensus       286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p~g~g~il~~  359 (435)
                      |.+.+    +++|.++|++||+++|+||+|++| ..     |.   .+.....  ..|++++|  |.+.++.++|+++. 
T Consensus       214 g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~-----g~---~~~~~~~~~~pdi~t~s--K~~~~G~~~G~~~~-  281 (429)
T 4e77_A          214 NCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RV-----AL---AGAQDYYHVIPDLTCLG--KIIGGGMPVGAFGG-  281 (429)
T ss_dssp             SCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TT-----BT---TCHHHHTTCCCSEEEEE--GGGGTTSCCEEEEE-
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-cc-----Cc---chHHHhcCCCCCeeeec--ccccCCCCeEEEEE-
Confidence            66655    999999999999999999999987 31     11   1111112  23776665  87555567888554 


Q ss_pred             CCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210        360 DLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN  425 (435)
Q Consensus       360 ~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~  425 (435)
                      ++++.+........+.++++       +-+..+.+++.++++.+..+++.+++++..+.+++.+++
T Consensus       282 ~~~~~~~l~~~~~~~~~~t~-------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  340 (429)
T 4e77_A          282 RREVMNALAPTGPVYQAGTL-------SGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRH  340 (429)
T ss_dssp             CHHHHTTBTTTSSBCC--CC-------CCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhccCCCccccCCC-------CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            55554432111111222222       122334456777787776677888888877777766654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.70  E-value=5.7e-16  Score=156.24  Aligned_cols=267  Identities=16%  Similarity=0.027  Sum_probs=175.8

Q ss_pred             CCCCCCCCcccccccC---ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVYY---YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~~---g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...++++..   ++|++.+++.++..+..+...+     ....+.+.++.+.+++++..+..+.++++++|+|
T Consensus        62 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsE  136 (456)
T 4atq_A           62 DGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFM-----VTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAE  136 (456)
T ss_dssp             TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTT-----TSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHH
T ss_pred             CCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccC-----ccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHH
Confidence            4445554443333222   4899999999998875332211     1123455667788888886554457899999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cC-------------CEEEEEecCCC------ccccHHH
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-FG-------------MKVKHIRLTSS------YTVDLAA  264 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g-------------~~v~~vp~~~~------~~~d~~~  264 (435)
                      |++.|++.++....      +.+|+....+|++....+.. .+             ..+..+|....      ...+.+.
T Consensus       137 A~e~AlklAr~~t~------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~  210 (456)
T 4atq_A          137 AVENAVKVARLATG------RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEA  210 (456)
T ss_dssp             HHHHHHHHHHHHHC------CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHH
T ss_pred             HHHHHHHHHhhhhc------CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHH
Confidence            99999999986543      35689888888885433322 11             24566665311      1122333


Q ss_pred             HHHHh-------h-cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        265 LQSAI-------T-GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       265 l~~~i-------~-~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                      +++.+       . +++++|++.......|.+    +.+++|.++|++||+++|+||++.||..        ....+.+.
T Consensus       211 ~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GR--------tG~~~a~e  282 (456)
T 4atq_A          211 AKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCR--------TGEWFAVD  282 (456)
T ss_dssp             HHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTT--------TSSSSGGG
T ss_pred             HHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCC--------cccccccc
Confidence            33332       2 357888888877777776    5699999999999999999999998733        22345555


Q ss_pred             CCCc--cEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210        333 LPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW  410 (435)
Q Consensus       333 ~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~  410 (435)
                      ..|+  |+++++  |.+.+...+|.++.+++. .+.   +.+...+++|+..+       .+.+++.++++.+.++++.+
T Consensus       283 ~~gv~PDivt~g--K~lggg~P~~av~~~~~i-~~~---~~~~~~~~Tf~gnp-------la~aaala~L~~i~~~~l~~  349 (456)
T 4atq_A          283 HEGVVPDIITMA--KGIAGGLPLSAITGRADL-LDA---VHPGGLGGTYGGNP-------VACAAALAAIDTMEQHDLNG  349 (456)
T ss_dssp             GTTCCCSEEEEC--GGGGTTSSCEEEEEEHHH-HTT---SCTTSSCCSSSSCH-------HHHHHHHHHHHHHHHTTHHH
T ss_pred             ccCCCCchhhhh--hcccCcCCceeeEecHHH-Hhc---ccccCCCCCCCCCh-------HHHHhhHHHHHHHhhccHHH
Confidence            5555  999887  654455677887777643 222   12333444443333       33478889999999999999


Q ss_pred             HHHHHHHHHHHHHHhc
Q psy10210        411 ICVRYHFNYKSCLQNL  426 (435)
Q Consensus       411 ~~~~~~~~~~~~~~~l  426 (435)
                      ++++..+++...++++
T Consensus       350 ~~~~~g~~l~~~L~~l  365 (456)
T 4atq_A          350 RARHIEELALGKLREL  365 (456)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999888877766654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.70  E-value=1.3e-16  Score=161.77  Aligned_cols=177  Identities=15%  Similarity=0.169  Sum_probs=114.6

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCC-CeEEEeCCCchhHHHHHHHcCCEEEEEe----
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISL-PEIVLPTTAHPAFDKAANYFGMKVKHIR----  253 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~-~~viv~~~~~~~~~~~~~~~g~~v~~vp----  253 (435)
                      ++++.+++++|.   +++++|+|||+|+.+++++++++....+|.++ ++|+++.+.+.++.......|+.+...+    
T Consensus        78 ~l~~~la~~~~~---~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~  154 (467)
T 2oqx_A           78 ALAESVKNIFGY---QYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEA  154 (467)
T ss_dssp             HHHHHHHHHHCC---SEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTT
T ss_pred             HHHHHHHHHhCc---CcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeecccccc
Confidence            445667777765   37999999999999999999876111112112 3488774333444555556677665442    


Q ss_pred             --cC----CCccccHHHHHHHhhc----CceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccc-hhhh-
Q psy10210        254 --LT----SSYTVDLAALQSAITG----NTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGG-FLAP-  317 (435)
Q Consensus       254 --~~----~~~~~d~~~l~~~i~~----~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~-~~~~-  317 (435)
                        .+    .++.+|++++++++++    ++++|++++|+||+ |.+   +++++|.++|++||+++|+|++++. ..+. 
T Consensus       155 ~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~  234 (467)
T 2oqx_A          155 FDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFI  234 (467)
T ss_dssp             TCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHH
T ss_pred             ccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhc
Confidence              22    3467899999999983    79999999999998 665   6789999999999999999987754 2210 


Q ss_pred             ---cccccCCCCCCCCCC---CCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        318 ---FMSAAGYPLPPFDFS---LPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       318 ---~~~~~g~~~~~~d~~---~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                         .....|..  ...+.   ...+|++++++||+++.|.| |+++.+++
T Consensus       235 ~~~~~~~~g~~--~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~  281 (467)
T 2oqx_A          235 KQREAEYKDWT--IEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDD  281 (467)
T ss_dssp             HHHCGGGTTSC--HHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSG
T ss_pred             ccccccccCcc--HHHHhhhhhccCCeEEEecccccCCCCc-eEEEecCh
Confidence               00011211  11110   02367889999999655545 66454444

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.70  E-value=2.7e-16  Score=160.12  Aligned_cols=255  Identities=13%  Similarity=0.012  Sum_probs=157.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh-c-
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE-K-  221 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~-~-  221 (435)
                      ++|++.+++.+........+...... ....+++.++.+.++++++... +.+++++||+||+..|+++++.....+ + 
T Consensus        80 ~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~-~~v~f~~sGseA~~~Aik~a~~~~~~~~~~  157 (472)
T 1ohv_A           80 SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGM-SQLITMACGSCSNENAFKTIFMWYRSKERG  157 (472)
T ss_dssp             TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTC-CEEEEESSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCc-CEEEEeCCchhHHHHHHHHHHHHhhhhccC
Confidence            48999999988754321111111110 1234566666666777665444 489999999999999999987542100 1 


Q ss_pred             ------------------CCCCCeEEEeCCCchhHHHHH-HHcCCE-----------EEEEecCC-Cc------------
Q psy10210        222 ------------------GISLPEIVLPTTAHPAFDKAA-NYFGMK-----------VKHIRLTS-SY------------  258 (435)
Q Consensus       222 ------------------g~~~~~viv~~~~~~~~~~~~-~~~g~~-----------v~~vp~~~-~~------------  258 (435)
                                        |.++++||+.++.|++....+ ...|..           +..+++.. .+            
T Consensus       158 ~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  237 (472)
T 1ohv_A          158 QSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQE  237 (472)
T ss_dssp             TCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHH
T ss_pred             cccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhH
Confidence                              212478999999988855444 333321           11223211 00            


Q ss_pred             -cccHHHHHHHhhc------CceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        259 -TVDLAALQSAITG------NTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       259 -~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                       ..|+++|++++++      ++++|+++..+|++|.+.+    +++|.++|++||+++|+||+|++|..     .|   .
T Consensus       238 ~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~-----~g---~  309 (472)
T 1ohv_A          238 EARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGS-----TG---K  309 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTT-----TS---S
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCC-----CC---C
Confidence             2368899999976      7899999888888998766    99999999999999999999987532     12   1


Q ss_pred             CCCCCCCC----ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        328 PFDFSLPG----VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       328 ~~d~~~~g----vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      .+.+...|    +|++++|  |..++   .|+++  ++++..    ..+...++++     .+  +....+++.++++.+
T Consensus       310 ~~~~~~~gv~~~~Di~t~s--K~~l~---GG~~~--~~~~~~----~~~~~~~~T~-----~~--~~~~~aaa~aal~~~  371 (472)
T 1ohv_A          310 FWAHEHWGLDDPADVMTFS--KKMMT---GGFFH--KEEFRP----NAPYRIFNTW-----LG--DPSKNLLLAEVINII  371 (472)
T ss_dssp             SSGGGGGCCSSCCSEEEEC--GGGSS---EEEEE--CGGGSC----SSSSSSCCSS-----SS--CHHHHHHHHHHHHHH
T ss_pred             chhccccCCCCCCCEEEEc--ccccc---CCccC--chhhcc----cccccccCcc-----Cc--cHHHHHHHHHHHHHH
Confidence            23333333    6887776  87212   25543  434321    1222222221     11  223345666777777


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ..+++.+++++..+.+.+.++++
T Consensus       372 ~~~~~~~~~~~~~~~l~~~L~~l  394 (472)
T 1ohv_A          372 KREDLLSNAAHAGKVLLTGLLDL  394 (472)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHH
Confidence            66677888888888877776654

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.69  E-value=2.4e-16  Score=159.56  Aligned_cols=242  Identities=12%  Similarity=0.060  Sum_probs=149.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+....   .     +....+++.++.++++++++ .. +++++|+||++|+.+++++++....     
T Consensus        74 ~~~~v~~a~~~~~~~~~---~-----~~~~~~~~~~la~~l~~~~~-~~-~~v~~~~gg~eA~~~al~~ar~~~~-----  138 (453)
T 2cy8_A           74 GHPRVNAAIAEALSHGV---Q-----YAASHPLEVRWAERIVAAFP-SI-RKLRFTGSGTETTLLALRVARAFTG-----  138 (453)
T ss_dssp             TCHHHHHHHHHHHTTTC---S-----SCSSCHHHHHHHHHHHHHCT-TC-SEEEEESCHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhCC---C-----CCCCCHHHHHHHHHHHhhCC-CC-CEEEEeCCHHHHHHHHHHHHHHhhC-----
Confidence            47889999988886521   1     12345788888999999886 33 4899999999999999998543211     


Q ss_pred             CCCeEEEeCCCchhHHHHHHH-----------cCC------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY-----------FGM------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNF  283 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~-----------~g~------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~n  283 (435)
                       +++|++.+++|+++...+..           .|+      .+..+|.     .|+++++++++   +++++|+++..+|
T Consensus       139 -~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~  212 (453)
T 2cy8_A          139 -RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFIAEPVGS  212 (453)
T ss_dssp             -CCEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSEH
T ss_pred             -CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEEECCCCC
Confidence             23589999999875543321           132      1233332     38999999987   4677877777667


Q ss_pred             CcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC--CCCCccEEEecCCCCCCccCCcEEEE
Q psy10210        284 PYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF--SLPGVTSISVDTHKYGFTPKGSSVVL  357 (435)
Q Consensus       284 ptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~--~~~gvd~~~~s~hK~~~~p~g~g~il  357 (435)
                      ++|.+.+    +++|.++|++||+++|+||+|+++ ..     |.   .+.+  .....|+++++  |.+.++.++|+++
T Consensus       213 ~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~-----g~---~~~~~~~~~~~di~s~s--K~l~~G~~~G~v~  281 (453)
T 2cy8_A          213 HFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RV-----GN---HGMQALLDVQPDLTCLA--KASAGGLPGGILG  281 (453)
T ss_dssp             HHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TT-----CT---THHHHHHTCCCSEEEEE--GGGGTTSSCEEEE
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-cc-----Cc---hhhhHHhCCCCcEEEEC--hhhhCCcceEEEe
Confidence            8998766    999999999999999999999976 31     10   1111  11124766554  9855556789977


Q ss_pred             EeCCccccccccc--cCCCCCCCCCCCccccCCCchHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        358 YRDLKYKHCQYFV--TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY-FGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       358 ~~~~~~~~~~~~~--~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~-~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .++ ++.+.....  .....+++     .  +.+....+++.++++. + .+++.+++++..+.+.+.++++
T Consensus       282 ~~~-~~~~~l~~~~~~~~~~~~t-----~--~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~  344 (453)
T 2cy8_A          282 GRE-DVMGVLSRGSDRKVLHQGT-----F--TGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNHL  344 (453)
T ss_dssp             ECH-HHHTTSSSCC--------------C--CCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHH
T ss_pred             chH-HHHHHhccccCCCceeCCC-----C--CCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHH
Confidence            654 544331110  00011111     1  1223334566677777 6 6778888888888887777654

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.69  E-value=1.5e-16  Score=159.98  Aligned_cols=243  Identities=12%  Similarity=0.008  Sum_probs=156.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+....   ..     ....+...++++.++++++ .. +++++|+||++|+.+++++++....     
T Consensus        73 ~~~~v~~a~~~~~~~~~---~~-----~~~~~~~~~l~~~la~~~~-~~-~~v~~~~sgseA~~~al~~ar~~~~-----  137 (434)
T 2epj_A           73 KHPRVLEAVEEALARGW---LY-----GAPGEAEVLLAEKILGYVK-RG-GMIRFVNSGTEATMTAIRLARGYTG-----  137 (434)
T ss_dssp             TCHHHHHHHHHHHHTCS---CC-----SSCCHHHHHHHHHHHHHHC-TT-CEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhCC---CC-----CCCCHHHHHHHHHHHHhCC-CC-CEEEEeCCHHHHHHHHHHHHHHhhC-----
Confidence            47899999999887621   11     1234566678888888885 33 4899999999999999998643221     


Q ss_pred             CCCeEEEeCCCchhHHHHHH--------------HcCC------EEEEEecCCCccccHHHHHHHhhc---CceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAAN--------------YFGM------KVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~--------------~~g~------~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~  280 (435)
                       +++|++.+++|+++...+.              ..|+      .+..+|.     .|++++++++++   ++++|+++.
T Consensus       138 -~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep  211 (434)
T 2epj_A          138 -RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIAGVIVEP  211 (434)
T ss_dssp             -CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEEEEEECS
T ss_pred             -CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEEEEEEeC
Confidence             2358888888877433221              1132      3555553     389999999873   677887777


Q ss_pred             CCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC--CCCCccEEEecCCCCCCccCCcE
Q psy10210        281 PNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF--SLPGVTSISVDTHKYGFTPKGSS  354 (435)
Q Consensus       281 p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~--~~~gvd~~~~s~hK~~~~p~g~g  354 (435)
                      .++++|.+.+    +++|.++|++||+++|+||+|++| ..     |.   .+..  .....|+++++  |.+.++.++|
T Consensus       212 ~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~-----g~---~~~~~~~~~~~di~s~s--K~l~~G~~~G  280 (434)
T 2epj_A          212 VIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RL-----GL---EGAQGYFNIEGDIIVLG--KIIGGGFPVG  280 (434)
T ss_dssp             SBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TS-----ST---THHHHHHTCCCSEEEEE--GGGGTTSSCE
T ss_pred             CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eC-----Cc---chhhHHhCCCCCeeeec--chhcCCccee
Confidence            7778998876    999999999999999999999976 21     10   1111  11135766554  8754445678


Q ss_pred             EEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        355 VVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       355 ~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +++.+ +++.+........+.++++       +.+....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus       281 ~v~~~-~~~~~~l~~~~~~~~~~t~-------~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~  344 (434)
T 2epj_A          281 AVAGS-REVMSLLTPQGKVFNAGTF-------NAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEV  344 (434)
T ss_dssp             EEEEC-HHHHTTBTTTSSBCCCCTT-------TTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeec-HHHHHhhccCCCcccCCCC-------CcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            86665 4544332110111122221       1222334566677777766677888888888877777654

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.68  E-value=5.9e-16  Score=156.79  Aligned_cols=277  Identities=13%  Similarity=0.011  Sum_probs=181.9

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...++++.   +++|++.+++.+++.+..+.+.    .+....+.+.++.+.++++.+.+-+ .++++++|||
T Consensus        65 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~----~~~~~~~~~~~lAe~L~~~~p~~~~-~v~f~~sGsE  139 (473)
T 4e3q_A           65 NGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHA----FFGRMSDQTVMLSEKLVEVSPFDSG-RVFYTNSGSE  139 (473)
T ss_dssp             TCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCC----CTTEEEHHHHHHHHHHHHHSSCSSC-EEEEESSHHH
T ss_pred             CCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccc----cccccCHHHHHHHHHHHhhCCCCcc-EEEEeCchHH
Confidence            344454443333332   2489999999999987533221    1223445667788889998865443 8999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHH-HHcC-----------CEEEEEecCC------Cccc-----
Q psy10210        205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAA-NYFG-----------MKVKHIRLTS------SYTV-----  260 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~-~~~g-----------~~v~~vp~~~------~~~~-----  260 (435)
                      |++.|++.++..... +|. .+.+||....+|++....+ ...|           .....+|...      .+..     
T Consensus       140 A~e~AiKlAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  218 (473)
T 4e3q_A          140 ANDTMVKMLWFLHAA-EGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV  218 (473)
T ss_dssp             HHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHh-cCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence            999999999877655 454 4667888888888743332 2222           1244444321      1111     


Q ss_pred             --cHHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210        261 --DLAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD  330 (435)
Q Consensus       261 --d~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d  330 (435)
                        ..+++++.+.    +++++|++.......|.+    +.+++|.++|++||+++|.||++.||-.        ....+.
T Consensus       219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGR--------tG~~fa  290 (473)
T 4e3q_A          219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGR--------TGNTWG  290 (473)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSST--------TSSSCH
T ss_pred             HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCc--------ccchhH
Confidence              1234555543    356788888877767776    5699999999999999999999999832        223444


Q ss_pred             CCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccc----cccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        331 FSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQY----FVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       331 ~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~----~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      +...|+  |+++++  |.+.+. .++|+++.+++ +.+...    ...+...|++|+..++       +.+++.++++.+
T Consensus       291 ~e~~gv~PDi~t~~--K~l~gG~~Pl~av~~~~~-i~~~~~~~~~~~~~~~hg~T~~Gnpl-------a~Aaala~L~~i  360 (473)
T 4e3q_A          291 CVTYDFTPDAIISS--KNLTAGFFPMGAVILGPE-LSKRLETAIEAIEEFPHGFTASGHPV-------GCAIALKAIDVV  360 (473)
T ss_dssp             HHHTTCCCSEEEEC--GGGGTTSSCCEEEEECHH-HHHHHHHHHHHHSCCCCCCTTTTCHH-------HHHHHHHHHHHH
T ss_pred             HHhcCCCCChHHhc--ccccCCCCCcccccccHH-HHHHhccccccccccccCCCCCCCcc-------hhhhhhhhhhhh
Confidence            444444  888877  754444 67788777764 332211    1122334555443333       347888999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .++++.+++++..+++++.+++|.+
T Consensus       361 ~~~~l~~~~~~~g~~l~~~L~~l~~  385 (473)
T 4e3q_A          361 MNEGLAENVRRLAPRFEERLKHIAE  385 (473)
T ss_dssp             HHSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999988887643

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.67  E-value=5.1e-16  Score=156.07  Aligned_cols=259  Identities=11%  Similarity=-0.022  Sum_probs=168.7

Q ss_pred             CCCCCCCCCcccccccC---ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVYY---YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~~---g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .+++.|.+...++++..   ++|++.+++.+++.+.....        .....+.++.+.+++++..  .+.+.++++||
T Consensus        84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~--------~~~~~~~~lae~l~~~~p~--~~~v~f~~SGs  153 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLT--------GHNLLEGRLARLICERFPQ--IEQLRFTNSGT  153 (454)
T ss_dssp             TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCC--------SEESSHHHHHHHHHHHSTT--CSEEEEESSHH
T ss_pred             CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCcc--------CCcHHHHHHHHHHHHhCCC--CCEEEEeCchH
Confidence            34555555444433322   48999999999987632111        1123456677788888753  34899999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc------CCEEEEEecCCCccccHHHHHHHhhc---Cce
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF------GMKVKHIRLTSSYTVDLAALQSAITG---NTV  274 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~------g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~  274 (435)
                      ||++.|++.++....      +++|+..+.+|++....+...      ......+|.     -|++.+++.+.+   +++
T Consensus       154 EA~e~AiklAr~~tg------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-----nd~~~l~~~l~~~~~~iA  222 (454)
T 4ao9_A          154 EANLMALTAALHFTG------RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-----NDAQTARAQIERHGPEIA  222 (454)
T ss_dssp             HHHHHHHHHHHHHHT------CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-----TCHHHHHHHHHHTGGGEE
T ss_pred             HHHHHHHHHHHhccc------CCeEEEEeCCcCCccccccccccCccCCCCcccCCC-----chHHHHHHHHhhcCCceE
Confidence            999999999987653      356888888887732211110      112333332     368888888863   578


Q ss_pred             EEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCC
Q psy10210        275 MLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGF  348 (435)
Q Consensus       275 ~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~  348 (435)
                      +|++.......|.+.+    +++|.++|++||+++|+||++.|- .      |.   .+.....|  .|+++++  |.+.
T Consensus       223 avIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR-~------G~---~~a~e~~gv~PDi~t~g--K~lg  290 (454)
T 4ao9_A          223 VVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSR-L------AP---HGLANKLGIRSDLTTLG--KYIG  290 (454)
T ss_dssp             EEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGG-G------ST---TCHHHHHTCCCSEEEEE--GGGG
T ss_pred             EEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCC-C------cc---ccchhccCCCCcEEEec--cccC
Confidence            8888887777888744    999999999999999999999752 1      21   12222223  3888877  7655


Q ss_pred             ccCCcEEEEEeCCcccccccc-ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        349 TPKGSSVVLYRDLKYKHCQYF-VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       349 ~p~g~g~il~~~~~~~~~~~~-~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +..++|.++.++ ++.+.... ..+...+++|+.       +..+++++.++|+.+.++++.+++++..+++++.++++
T Consensus       291 gG~Piga~~~~~-ei~~~~~~~~~~~~h~~T~~g-------nPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l  361 (454)
T 4ao9_A          291 GGMSFGAFGGRA-DVMALFDPRTGPLAHSGTFNN-------NVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNAL  361 (454)
T ss_dssp             TTSSCEEEEECH-HHHGGGCTTTCSCCCCCTTTT-------CHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcceeeeeHH-HHHHHHhhccCCccccCCCCC-------CHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence            556778866554 44432111 112223443322       33345788899999988999999988888887777654

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.66  E-value=8.5e-16  Score=154.07  Aligned_cols=242  Identities=13%  Similarity=0.051  Sum_probs=154.4

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+...  . ..     ....+...++++.++++++ .. +++++|+||++|+..++++++....     
T Consensus        69 ~~p~v~~a~~~~~~~~--~-~~-----~~~~~~~~~l~~~l~~~~~-~~-~~v~~~~~g~ea~~~al~~ar~~~~-----  133 (424)
T 2e7u_A           69 AHPKVLARVRETLERG--L-TF-----GAPSPLEVALAKKVKRAYP-FV-DLVRFVNSGTEATMSALRLARGYTG-----  133 (424)
T ss_dssp             TCHHHHHHHHHHHHTC--S-CC-----SSCCHHHHHHHHHHHHHCT-TC-CEEEEESSHHHHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHhC--C-CC-----CCCCHHHHHHHHHHHHhCC-CC-CEEEEeCCHHHHHHHHHHHHHHhhC-----
Confidence            3789999999888752  1 11     1234566778888888885 33 4899999999999999997543221     


Q ss_pred             CCCeEEEeCCCchhHHHHHHH--------------cCC------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY--------------FGM------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~--------------~g~------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~  280 (435)
                       +++|++.+++|+++...+..              .|+      ++..+|.     .|+++++++++   +++++|+++.
T Consensus       134 -~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep  207 (424)
T 2e7u_A          134 -RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIAAIIFEP  207 (424)
T ss_dssp             -CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEEEEECS
T ss_pred             -CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEEEEEEeC
Confidence             23599999998875443221              122      3444543     38999999887   3566666654


Q ss_pred             CCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC--CCCccEEEecCCCCCCccCCcE
Q psy10210        281 PNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--LPGVTSISVDTHKYGFTPKGSS  354 (435)
Q Consensus       281 p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--~~gvd~~~~s~hK~~~~p~g~g  354 (435)
                      .++++|.+.+    +++|.++ ++||+++|+||+|++| ..     |.   .+...  ....|+++  ++|.+.++.++|
T Consensus       208 ~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~-----g~---~~~~~~~~~~~di~s--~sK~l~~G~~~G  275 (424)
T 2e7u_A          208 VVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RL-----AF---GGATELLGLKPDLVT--LGKILGGGLPAA  275 (424)
T ss_dssp             SBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TS-----ST---THHHHHHTCCCSEEE--ECGGGGTTSSCE
T ss_pred             CCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-cc-----ch---hHHHHHhCCCcchhh--hhhhhhCCcceE
Confidence            4445898766    9999999 9999999999999977 31     10   11111  11246664  459855556688


Q ss_pred             EEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210        355 VVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       355 ~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      +++.++ ++.+........+.++++       +.+..+.+++.++++.+.. +++.+++++..+.+.+.++++
T Consensus       276 ~~~~~~-~~~~~~~~~~~~~~~~t~-------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~  340 (424)
T 2e7u_A          276 AYAGRR-EIMEKVAPLGPVYQAGTL-------SGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEV  340 (424)
T ss_dssp             EEEECH-HHHTTBTTTSSBCCCCTT-------CSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcH-HHHhhhcccCCcccCCCC-------CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence            866654 554432110111222221       1222334566777777766 778888888888888777664

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.61  E-value=3.7e-15  Score=148.95  Aligned_cols=204  Identities=13%  Similarity=0.102  Sum_probs=139.0

Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC
Q psy10210        115 LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET  194 (435)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~  194 (435)
                      +.|.+........+.      ...|.+..|.|++++++++.+.....  +                          ....
T Consensus        65 ~~Vk~A~~~~~~~~~------~~~Y~p~~G~p~lr~aia~~~~g~~~--~--------------------------~~~~  110 (420)
T 4h51_A           65 RVVRKAEQLLLDMNL------DYEYLPISGYQPFIDEAVKIIYGNTV--E--------------------------LENL  110 (420)
T ss_dssp             HHHHHHHHHHHHTTC------CCCCCCTTCCHHHHHHHHHHHHC-----C--------------------------GGGE
T ss_pred             HHHHHHHHHHhcCCC------CCCCCCcCChHHHHHHHHHHhcCCCc--c--------------------------cccc
Confidence            455555555554321      23477888999999999987643110  0                          0111


Q ss_pred             ceEEcCChHHHHHHHHHHHH----HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE-EEecC--CCccccHHHHHH
Q psy10210        195 CGCMTSGGTESIMMACKAYR----DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK-HIRLT--SSYTVDLAALQS  267 (435)
Q Consensus       195 ~~~~t~ggteai~~a~~a~~----~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~-~vp~~--~~~~~d~~~l~~  267 (435)
                      ..+-|.|||.|+..++..+.    ++++.        |++++|+|+.+...++..|.+.+ ..+..  +++.+|.+.+.+
T Consensus       111 ~~~qt~ggtga~~~a~~~l~~~~~~pgd~--------V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~  182 (420)
T 4h51_A          111 VAVQTLSGTGAVSLGAKLLTRVFDAETTP--------IYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKK  182 (420)
T ss_dssp             EEEEEEHHHHHHHHHHHHHTTTSCTTTSC--------EEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHH
T ss_pred             ceeeecCchHHHHHHHHHHHHhcCCCCCE--------EEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHH
Confidence            34568899999988887764    34444        99999999999999999999744 44432  456788888888


Q ss_pred             Hhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-ccEEE
Q psy10210        268 AIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG-VTSIS  340 (435)
Q Consensus       268 ~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g-vd~~~  340 (435)
                      .+.   +++++++.++||||||.+   +++++|+++|+++++++++|++|.+|...-.......  ...+...+ -.+++
T Consensus       183 ~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~--~~~~~~~~~~~i~~  260 (420)
T 4h51_A          183 DILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYA--ARLFARRGIEVLLA  260 (420)
T ss_dssp             HHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH--HHHHHHTTCCCEEE
T ss_pred             HHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHH--HHhHHhhCceEEEE
Confidence            774   567888999999999999   7899999999999999999999998865200000000  00001111 24566


Q ss_pred             ecCCCC-CCccCCcEEEEEeCCc
Q psy10210        341 VDTHKY-GFTPKGSSVVLYRDLK  362 (435)
Q Consensus       341 ~s~hK~-~~~p~g~g~il~~~~~  362 (435)
                      .|+.|. +.....+|++....+.
T Consensus       261 ~s~SK~~~~~G~RvG~~~~~~~~  283 (420)
T 4h51_A          261 QSFSKNMGLYSERAGTLSLLLKD  283 (420)
T ss_dssp             EECTTTSCCGGGCEEEEEEECSC
T ss_pred             eccccccccccCceEEEEecccC
Confidence            688896 3334668997777654

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.60  E-value=6.2e-16  Score=155.41  Aligned_cols=140  Identities=16%  Similarity=0.175  Sum_probs=106.9

Q ss_pred             CceEEcCChHHHHHHHHHHH--------HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHH
Q psy10210        194 TCGCMTSGGTESIMMACKAY--------RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAAL  265 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~--------~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l  265 (435)
                      +++++|+|+++++.+++.++        .++++.        |++++|+|+.+...++..|++++.      +.+|++++
T Consensus       124 ~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l  189 (427)
T 2hox_A          124 RYIVFGVGVTQLIHGLVISLSPNMTATPDAPESK--------VVAHAPFYPVFREQTKYFDKKGYV------WAGNAANY  189 (427)
T ss_dssp             CEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEE--------EEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGG
T ss_pred             CEEEEeCCHHHHHHHHHHHHhhccccccCCCCCE--------EEEeCCCcccHHHHHHHcCCeeee------ecCCHHHH
Confidence            48999999999999999999        666665        999999999999999999988764      34678888


Q ss_pred             HHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCC
Q psy10210        266 QSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK  345 (435)
Q Consensus       266 ~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK  345 (435)
                      ++++++++++|++++||||||.+-+ +    +++  ++..+.|+++..   ++     .  ....+. .+.+++..|++|
T Consensus       190 ~~~~~~~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~---~~-----~--s~~~~~-~~~~i~~~S~SK  251 (427)
T 2hox_A          190 VNVSNPEQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYW---PH-----Y--TPIKYK-ADEDILLFTMSK  251 (427)
T ss_dssp             TTCSCGGGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCS---TT-----T--SCCCSC-BCCSEEEEEHHH
T ss_pred             HHhhcCCceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccC---CC-----C--CccccC-CCceEEEEeChh
Confidence            8888888999999999999999966 3    233  566777777632   10     0  111221 457899999999


Q ss_pred             CCCccCC--cEEEEEeCCccccc
Q psy10210        346 YGFTPKG--SSVVLYRDLKYKHC  366 (435)
Q Consensus       346 ~~~~p~g--~g~il~~~~~~~~~  366 (435)
                      . +++.|  +|+++.+++++.+.
T Consensus       252 ~-~g~~G~RiG~~~~~~~~l~~~  273 (427)
T 2hox_A          252 F-TGHSGSRFGWALIKDESVYNN  273 (427)
T ss_dssp             H-TSCGGGCCEEEEECCHHHHHH
T ss_pred             c-CCCCCceEEEEEECCHHHHHH
Confidence            8 45444  89977766666543

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.36  E-value=1.3e-16  Score=161.38  Aligned_cols=242  Identities=9%  Similarity=-0.085  Sum_probs=158.7

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++.+++.+.+.+.. .       +....+.+.++.+.++++++ .. +.++++++|+||+..++++++....     
T Consensus       117 ~~p~V~~Av~~q~~~~~-~-------~~~~~~~~~~Lae~L~~~~p-~~-~~v~~~nSGseA~~~Aik~ar~~tg-----  181 (465)
T 2yky_A          117 SHPVIRAAVERALAVGL-N-------LSTQTENEALFAEAVCDRFP-SI-DLVRFTNSGTEANLMALATATAITG-----  181 (465)
Confidence            47999999998877621 1       11234566778888888885 22 3789999999999999998764221     


Q ss_pred             CCCeEEEeCCCchhHHHHHH----HcCC--EEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCccccc----C
Q psy10210        224 SLPEIVLPTTAHPAFDKAAN----YFGM--KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTMD----D  290 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~----~~g~--~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~----~  290 (435)
                       +++||+.+++|++....+.    ..|+  .+..+|.     -|+++++++++   +++++|+++..++++|.+.    .
T Consensus       182 -r~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~  255 (465)
T 2yky_A          182 -RKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAF  255 (465)
Confidence             2359999999988554433    1233  2223332     37889999987   6788988887666799764    4


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQY  368 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~  368 (435)
                      +++|.++|++||+++|+||+|+ |..      |.   .+.+...|  .|+++  +.|++.++.++|+++.+ +++.+...
T Consensus       256 l~~l~~l~~~~g~llI~DEv~~-~r~------g~---~~a~~~~gv~pDi~t--~sK~lg~G~piG~v~~~-~~i~~~l~  322 (465)
T 2yky_A          256 LDLLRAEASRCGALLIFDEVMT-SRL------SG---GGAQEMLGISADLTT--LGKYIGGGMSFGAFGGR-RDLMERFD  322 (465)
Confidence            9999999999999999999998 622      11   11222223  46554  55986555567885554 45544321


Q ss_pred             c--ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        369 F--VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       369 ~--~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .  ..+.+.+++     +.+  +..+.+++.++++.+..+++.+++++..+.+++.++++
T Consensus       323 ~~~~g~~~~~~T-----~~~--npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~  375 (465)
T 2yky_A          323 PARDGAFAHAGT-----FNN--NILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRI  375 (465)
Confidence            1  000122222     222  22233567778888877888888888888887777654

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.51  E-value=4.9e-13  Score=131.34  Aligned_cols=226  Identities=13%  Similarity=0.103  Sum_probs=145.8

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH--------
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA--------  241 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~--------  241 (435)
                      .+-++|.-+++...++||++.....  +=..+|+.|+..+..++.+++|+        |+..+..|.++..-        
T Consensus        97 ~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~--------ilg~~l~~GGHltHg~~~~~~~  168 (490)
T 3ou5_A           97 VVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR--------IMGLDLPDGGHLTHGYMSDVKR  168 (490)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCC--------EECBC-----------------
T ss_pred             HHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCE--------EEecccCCCCcccccccCCCcc
Confidence            4667888888899999999876432  33457899999999999999998        88777765553221        


Q ss_pred             HHHcCC--EEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhh
Q psy10210        242 ANYFGM--KVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP  317 (435)
Q Consensus       242 ~~~~g~--~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~  317 (435)
                      ....|.  +...++++ +++.+|.+++++...+ ++++|++-.-.+|  ..-|++++.++|++.|.++++|.+|-.++..
T Consensus       169 v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA  246 (490)
T 3ou5_A          169 ISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVA  246 (490)
T ss_dssp             -----------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHH
T ss_pred             cccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhc
Confidence            122233  34444555 6789999999987764 8999987765554  3468999999999999999999999877764


Q ss_pred             cccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCc--------------ccccc-ccccCCCCCCCCCCC
Q psy10210        318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK--------------YKHCQ-YFVTSDWPGGNYGSP  382 (435)
Q Consensus       318 ~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~--------------~~~~~-~~~~~~~~gg~~~~~  382 (435)
                          .|.-..|++    .+|+++.++||++.||.| |+|++++..              +.+.. ....|.         
T Consensus       247 ----~g~~psP~~----~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg---------  308 (490)
T 3ou5_A          247 ----AKVIPSPFK----HADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPS---------  308 (490)
T ss_dssp             ----TTSSCCGGG----TCSEEEEESSSTTCSCSC-EEEEEECSEEEECC--CCEEECCCHHHHHHHHTTT---------
T ss_pred             ----ccccCCccc----cceEEeccccccccCCCc-eEEEeccccccccccccchhHHHHHHHHHhhcCcc---------
Confidence                233223444    389999999999889986 888888741              11110 011232         


Q ss_pred             ccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        383 SVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       383 ~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       ++|..-...+|+...++...-...+++..+++.++++.+.+.|
T Consensus       309 -~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L  351 (490)
T 3ou5_A          309 -LQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL  351 (490)
T ss_dssp             -TCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -ccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Confidence             3333333445444444544334556677777777666666554

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.37  E-value=2.9e-12  Score=138.11  Aligned_cols=244  Identities=14%  Similarity=0.019  Sum_probs=147.8

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~  223 (435)
                      +|++.+++.++..+..+....     ....+...++.+.++++++.+.-+.++++++|+||++.|++.+ +.+... +|.
T Consensus       399 ~p~i~~Ai~~Q~~~l~h~~~~-----~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~-~g~  472 (831)
T 4a0g_A          399 QAELAREMGYTAARFGHVMFP-----ENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVD-HNF  472 (831)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCT-----TEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHT-TTC
T ss_pred             CHHHHHHHHHHHhhccccccc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhh-cCC
Confidence            799999999998886443211     1233555577788888886442348999999999999999998 444332 443


Q ss_pred             ---------CCCeEEEeCCCchhHH-HHHHHcCCE----------------------------EEEEecCCCcc------
Q psy10210        224 ---------SLPEIVLPTTAHPAFD-KAANYFGMK----------------------------VKHIRLTSSYT------  259 (435)
Q Consensus       224 ---------~~~~viv~~~~~~~~~-~~~~~~g~~----------------------------v~~vp~~~~~~------  259 (435)
                               .+.+||..+.+|++-. .++...|..                            +..++....++      
T Consensus       473 ~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~  552 (831)
T 4a0g_A          473 CEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEY  552 (831)
T ss_dssp             ---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSST
T ss_pred             CccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCcccccccccc
Confidence                     3567888888887733 333333310                            11222221100      


Q ss_pred             ---cc------------------HHHHHHHhh--------cCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcE
Q psy10210        260 ---VD------------------LAALQSAIT--------GNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPV  305 (435)
Q Consensus       260 ---~d------------------~~~l~~~i~--------~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~l  305 (435)
                         -|                  .+++++.+.        +++++|++... ++..|.+    +.+++|.++|++||+++
T Consensus       553 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilL  632 (831)
T 4a0g_A          553 GTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPV  632 (831)
T ss_dssp             TEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCE
T ss_pred             ccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeE
Confidence               01                  256777764        34677877775 7777877    34999999999999999


Q ss_pred             EEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCcccccccc---ccCCCCCCCC
Q psy10210        306 HVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYF---VTSDWPGGNY  379 (435)
Q Consensus       306 ivD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~---~~~~~~gg~~  379 (435)
                      |+||++.||..        ....+.....|  .|+++++  |.+.+. .++|+++.+++ +.+....   ......|++|
T Consensus       633 I~DEV~tGfGR--------tG~~fa~e~~gv~PDiitls--K~L~gG~~Plgav~~~~~-i~~~~~~~~~~~~~~hg~T~  701 (831)
T 4a0g_A          633 IFDEVFTGFWR--------LGVETTTELLGCKPDIACFA--KLLTGGMVPLAVTLATDA-VFDSFSGDSKLKALLHGHSY  701 (831)
T ss_dssp             EEECTTTTTTT--------TSBSSTHHHHSSCCSEEEEC--GGGGTTSSCCEEEEECHH-HHHTTCSSCGGGSCCCCCTT
T ss_pred             EEEcCcccccc--------CCCchhhHhcCCCCcEEEEe--cccccCccCcEEEEECHH-HHHHHhcccccccceeecCC
Confidence            99999998733        22233332333  3888766  864443 46688776654 3322110   0111233333


Q ss_pred             CCCccccCCCchHHHHHHHHHHHhcHHHHHHHH
Q psy10210        380 GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC  412 (435)
Q Consensus       380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~  412 (435)
                      +.+       ..+.+++.++++.+..+++.+++
T Consensus       702 ~g~-------Pla~Aaala~L~~i~~~~l~~~~  727 (831)
T 4a0g_A          702 SAH-------AMGCATAAKAIQWFKDPETNHNI  727 (831)
T ss_dssp             TTC-------HHHHHHHHHHHHHHHCTTTCTTB
T ss_pred             ccc-------HHHHHHHHHHHHHHHhhHHHHHH
Confidence            222       23346778888887655555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	435
d1pmma_	450	c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {	3e-64
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	2e-49
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	2e-39
d1js3a_	476	c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa)	9e-38
d1p3wa_	391	c.67.1.3 (A:) Cysteine desulfurase IscS {Escherich	4e-12
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	2e-10
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	1e-08
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	4e-08
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	1e-07
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	2e-07
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	6e-07
d1mdoa_	376	c.67.1.4 (A:) Aminotransferase ArnB {Salmonella ty	2e-04
d1m32a_	361	c.67.1.3 (A:) 2-aminoethylphosphonate transaminase	0.004

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]} Length = 450

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

 Score =  211 bits (538), Expect = 3e-64
 Identities = 61/338 (18%), Positives = 127/338 (37%), Gaps = 24/338 (7%)

Query: 106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPL 165
             P          +++++ L     + +    +    +  +++  L+          N +
Sbjct: 29  RFPLHEMRDDVAFQIINDELYLDG-NARQNLATFCQTWDDENVHKLMDLSIN----KNWI 83

Query: 166 HPDIFPGVCKMEAEVIKMCARMFNG----GPETCGCMTSGGTESIMMACKAYRDYARE-- 219
             + +P    ++   + M A +++       +  G  T G +E+ M+   A +   R+  
Sbjct: 84  DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 143

Query: 220 --EKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVML 276
                 +    ++       + K A Y+ ++++ I +      +D   +  A   NT+ +
Sbjct: 144 EAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGV 203

Query: 277 VGSMPNFPYGTMD------DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330
           V +      G  +      D     +      I +H+D   GGFLAPF+     P   +D
Sbjct: 204 VPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFV----APDIVWD 259

Query: 331 FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSG 390
           F LP V SIS   HK+G  P G   V++RD +    +     D+ GG  G+ +++ SR  
Sbjct: 260 FRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPA 319

Query: 391 GIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428
           G +   +   +  G E    +    +         ++ 
Sbjct: 320 GQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK 357

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  172 bits (435), Expect = 2e-49
 Identities = 36/340 (10%), Positives = 83/340 (24%), Gaps = 40/340 (11%)

Query: 106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPL 165
           + P  G +   +   +         ++      G      +    L+        +    
Sbjct: 18  KCPEDGWDESTLELFLHELAVMDSNNFLGN--CGVGEREGRVASALVARRHYRFIHGIGR 75

Query: 166 HPDIFP---------GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDY 216
             DI            + K+   ++    ++          +    T   +  C     +
Sbjct: 76  SGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRH 135

Query: 217 AREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL---TSSYTVDLAALQSA----I 269
            R +       I+ P     +  K+    G +   I           DL A+++      
Sbjct: 136 KRPKA----KYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELG 191

Query: 270 TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329
             + + L  +   F     D +  +A +   Y IP  V+   G   +  M      L   
Sbjct: 192 PEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCM-----HLIQQ 246

Query: 330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRS 389
              +  + +      K    P G +++   +  +      +                  S
Sbjct: 247 GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGR-------------AS 293

Query: 390 GGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL 429
                     ++  G      +       +      L  L
Sbjct: 294 ASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKL 333

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score =  145 bits (365), Expect = 2e-39
 Identities = 53/372 (14%), Positives = 116/372 (31%), Gaps = 45/372 (12%)

Query: 75  VRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKH 134
           +   + +   K  +L  ++  +    +    ++P  G +  +I   +             
Sbjct: 6   IEGLIPKNMEKRGELVLNEYLKEIEDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPK 65

Query: 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFP---------GVCKMEAEVIKMCA 185
               G           +  E+     +      ++            +  +  ++++   
Sbjct: 66  SVRIGEREAR--TYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFF 123

Query: 186 RMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF 245
           +   G              SI +   A R        I       P  +H +  KA ++ 
Sbjct: 124 KQL-GLNVHAIATPISTGMSISLCLSAARKKYGSNVVI------YPYASHKSPIKAVSFV 176

Query: 246 GMKVKHIRL---TSSYTVDLAALQSAI-----TGNTVMLVGSMPNFPYGTMDDIGAIAKL 297
           GM ++ +          V +  +++AI      GN   ++ ++  FP    DDI  IAK+
Sbjct: 177 GMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKI 236

Query: 298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL 357
            E Y IP  ++         ++         F +    V ++   + K   TP G  +V 
Sbjct: 237 CENYDIPHIINGAYAIQNNYYL---EKLKKAFKY---RVDAVVSSSDKNLLTPIGGGLVY 290

Query: 358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF 417
             D ++                 S S  G  S   +     +++  G +  + +      
Sbjct: 291 STDAEFIK-------------EISLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKN 337

Query: 418 NYKSCLQNLSDL 429
           + K   + L+DL
Sbjct: 338 SKKLLDELLNDL 349

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 476

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  141 bits (355), Expect = 9e-38
 Identities = 44/367 (11%), Positives = 105/367 (28%), Gaps = 44/367 (11%)

Query: 105 LELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNP 164
              P +     +IL+ V   +  G   W         +        +L ++         
Sbjct: 44  ATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAY-FPTASSYPAMLADMLCGAIGCIG 102

Query: 165 LHPDIFPGVCKMEAEVIKMCARMF--------NGGPETCGCMTSGGTESIMMACKAYRDY 216
                 P   ++E  ++    +M             E  G +    +E+ ++A  A R  
Sbjct: 103 FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTK 162

Query: 217 A-----------REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAAL 265
                        +   +          AH + ++A    G+K+K I     + +  +AL
Sbjct: 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASAL 222

Query: 266 QSAITGNT------VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM 319
           Q A+  +         +V ++      + D++  +  +  +  I +HVD    G      
Sbjct: 223 QEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICP 282

Query: 320 SAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN- 378
                        +    S + + HK+       S +  +        + +   +   + 
Sbjct: 283 EFR-----HLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSH 337

Query: 379 --------YGSPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLS 427
                   Y    +   R    +   W     +   G +A +   V+    +++ +    
Sbjct: 338 QGSGLITDYRHWQLPLGRRFRSLK-MWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDP 396

Query: 428 DLWLYLP 434
              +   
Sbjct: 397 RFEVCAE 403

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Length = 391

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

 Score = 65.0 bits (157), Expect = 4e-12
 Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 16/251 (6%)

Query: 185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY 244
           A +    P      TSG TES  +A K   ++  ++KG  +        A     +    
Sbjct: 58  ADLVGADPREI-VFTSGATESDNLAIKGAANF-YQKKGKHIITSKTEHKAVLDTCRQLER 115

Query: 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP 304
            G +V ++    +  +DL  L++A+  +T+++     N   G + DI AI ++    GI 
Sbjct: 116 EGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGII 175

Query: 305 VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364
            HVD                   P D S   V  +S   HK        ++ + R  + +
Sbjct: 176 YHVDAT-----------QSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVR 224

Query: 365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ 424
                       G            G   A   A         ++       +N    ++
Sbjct: 225 IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNG---IK 281

Query: 425 NLSDLWLYLPW 435
           ++ +++L    
Sbjct: 282 DIEEVYLNGDL 292

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 60.3 bits (145), Expect = 2e-10
 Identities = 28/242 (11%), Positives = 61/242 (25%), Gaps = 32/242 (13%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA-HPAFDKAANYFGMKVKHI----- 252
           T  G  +  +          +EKG+   ++V  +          +   G  V+++     
Sbjct: 95  THQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEA 154

Query: 253 -----RLTSSYTVDLAALQSAITGNTVMLVGSMPNFP--------YGTMDDIGAIAKLGE 299
                R       DL  L+  I       V  +              ++ ++ A+  + +
Sbjct: 155 FDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAK 214

Query: 300 KYGIPVHVDCCL------GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS 353
           KY IPV +D                             +      +++   K    P G 
Sbjct: 215 KYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGG 274

Query: 354 SVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV 413
            + +  D  +                          GG+       +    ++      +
Sbjct: 275 LLCMKDDSFFDVYTE-------CRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWL 327

Query: 414 RY 415
            Y
Sbjct: 328 AY 329

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 54.1 bits (129), Expect = 1e-08
 Identities = 18/161 (11%), Positives = 48/161 (29%), Gaps = 18/161 (11%)

Query: 168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPE 227
           + + G      +V +   +   G         +  + +I+    A      + K +    
Sbjct: 43  NTYIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL-----KPKKVIH-- 95

Query: 228 IVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVM-LVGSMPNFPYG 286
            +     HP+ +++      K  +          +  + + I  +T++ + GS  +    
Sbjct: 96  YLPELPGHPSIERSCKIVNAK--YFESD-----KVGEILNKIDKDTLVIITGSTMDLKVI 148

Query: 287 TMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327
            +++   +    +     V VD       A        P  
Sbjct: 149 ELENFKKVINTAKNKEAIVFVDD---ASGARVRLLFNQPPA 186

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 52.9 bits (126), Expect = 4e-08
 Identities = 31/237 (13%), Positives = 70/237 (29%), Gaps = 28/237 (11%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD--KAANYFGMKVKHIRLTS 256
           T  G  +  +  +      +  + ++       T  H   +     +    +     L  
Sbjct: 96  THQGRGAENLLSQLAI---KPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNL 152

Query: 257 SYT--VDLAALQSAITGNT--------VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306
            +   +DL  L + I            + +  ++      +M ++ A+ ++   YGI + 
Sbjct: 153 PFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIF 212

Query: 307 VDCC--LGGFLAPFMSAAGYP------LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLY 358
            D    +          AGY       +    FS     ++S    K      G  + + 
Sbjct: 213 YDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMS--GKKDCLVNIGGFLCMN 270

Query: 359 RDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY 415
            +  +   +  V       +YG  +     +   +A      M + +       VRY
Sbjct: 271 DEEMFSAAKELVVVYEGMPSYGGLAGRDMEA---MAIGLREAMQYEYIEHRVKQVRY 324

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 51.1 bits (121), Expect = 1e-07
 Identities = 30/248 (12%), Positives = 65/248 (26%), Gaps = 32/248 (12%)

Query: 199 TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI------ 252
              G  +  +       Y ++++G +   + +               G K  +I      
Sbjct: 96  AHQGRGAENILFPVLLKY-KQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAF 154

Query: 253 ----RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYG--------TMDDIGAIAKLGEK 300
                       D+  L+  I  +    + ++ +            +M ++  + ++ ++
Sbjct: 155 DSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQ 214

Query: 301 YGIPVHVDCCLGGFLAPF-----MSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSV 355
           +GI V +D       A F            +    F +         + K         +
Sbjct: 215 HGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGL 274

Query: 356 VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY 415
           V  RD +                   P       GG+     AAM+    E      + Y
Sbjct: 275 VAIRDNEEIFT--------LARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHY 326

Query: 416 HFNYKSCL 423
                  L
Sbjct: 327 RIGQVKYL 334

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 13/144 (9%)

Query: 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHP 236
           EA   K               +T GG++++    +A  D   E        +++ +    
Sbjct: 75  EALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE--------VIVLSPYWV 126

Query: 237 AFDKAANYFGMKVKHIRLTSSYT--VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDI 291
           ++ +   + G  V  +          D   ++ AIT  T  LV + PN P G +   + +
Sbjct: 127 SYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVL 186

Query: 292 GAIAKLGEKYGIPVHVDCCLGGFL 315
            A+A+L  ++   +  D      L
Sbjct: 187 EALARLAVEHDFYLVSDEIYEHLL 210

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 48.9 bits (116), Expect = 6e-07
 Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 6/91 (6%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS 257
              G T+ I     +              ++V     +P F +   YF  K         
Sbjct: 128 FGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAG--- 184

Query: 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM 288
              + A   +       + + + PN P G +
Sbjct: 185 ---NAANYVNVSNPEQYIEMVTSPNNPEGLL 212

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]} Length = 376

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 38/222 (17%), Positives = 60/222 (27%), Gaps = 18/222 (8%)

Query: 198 MTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS 257
             S  T  + +A  A      +E       I    T     +         V       +
Sbjct: 51  AVSSATAGMHIALMALGIGEGDEV------ITPSMTWVSTLNMIVLLGANPVMVDVDRDT 104

Query: 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP 317
             V    +++AIT  T  +   +P    G   D+ AI  LGE+YGIPV  D         
Sbjct: 105 LMVTPEHIEAAITPQTKAI---IPVHYAGAPADLDAIYALGERYGIPVIEDAA------- 154

Query: 318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG 377
              A G           G    S    K     +G  VV          +          
Sbjct: 155 --HATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVD 212

Query: 378 NYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNY 419
            +   S   +    ++A  +   +     A     ++     
Sbjct: 213 AWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDAL 254

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

 Score = 36.7 bits (83), Expect = 0.004
 Identities = 27/269 (10%), Positives = 67/269 (24%), Gaps = 23/269 (8%)

Query: 175 KMEAEVIKMCARMFNGGP-ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT 233
            +  ++ +    +       T   +   G+ ++     +      +   +S         
Sbjct: 33  GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMV 92

Query: 234 AHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGA 293
                   A++     +  R        +      I+   ++          G ++ I  
Sbjct: 93  EMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHS----ETTTGMLNPIDE 148

Query: 294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS 353
           +  L  +YG    VD             + +   P D +   +  +    +K      G 
Sbjct: 149 VGALAHRYGKTYIVDA-----------MSSFGGIPMDIAALHIDYLISSANKCIQGVPGF 197

Query: 354 SVVLYRDLKYKHCQYFVTS-------DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406
           + V+ R+ K   C+    S        W            +     +     A+     E
Sbjct: 198 AFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKE 257

Query: 407 AQVWICVRYHFNYKSCLQNLSDLWLYLPW 435
             V    + +   +  L        +   
Sbjct: 258 GGVAARHQRYQQNQRSLVAGMRALGFNTL 286

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	435
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	100.0
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	100.0
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.97
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.96
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.95
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.94
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.94
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.93
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.93
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.93
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.92
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.92
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.91
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.9
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.9
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.9
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.9
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.89
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.88
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.88
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.88
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.86
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.86
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.86
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.85
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.85
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.84
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.83
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.83
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.83
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.82
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.82
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.79
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.79
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.78
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.77
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.77
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.76
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.76
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.74
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.73
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.72
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.72
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.72
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.72
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.71
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.7
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.7
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.69
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.69
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.68
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.67
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.67
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.67
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.66
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.65
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.63
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.62
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.6
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.59
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.59
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.59
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.59
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.58
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.57
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.57
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.56
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.55
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.55
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.54
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.54
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.54
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.52
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.51
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.51
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.51
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.5
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.49
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.48
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.43
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.42
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.42
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.41
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.39
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.35
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.29

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-41  Score=340.14  Aligned_cols=316  Identities=19%  Similarity=0.279  Sum_probs=266.7

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM  183 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  183 (435)
                      ...+|+.+.+++++.+.+.+.+..+++. .-+..++..+..+|+..+++.+.++    .|.++.+.+|...++|.++++|
T Consensus        27 ~~~~p~~~~~~~~~~~~i~d~l~~dg~~-~~n~asf~~t~~~~~~~~l~~~~~~----~N~~~~~~~P~~~~lE~~~v~~  101 (450)
T d1pmma_          27 SKRFPLHEMRDDVAFQIINDELYLDGNA-RQNLATFCQTWDDENVHKLMDLSIN----KNWIDKEEYPQSAAIDLRCVNM  101 (450)
T ss_dssp             CSSCCCSCCCHHHHHHHHHHHGGGSCCG-GGBCSCCSCCCCCHHHHHHHHHTTT----CBTTCTTTSHHHHHHHHHHHHH
T ss_pred             cccCCccCCCHHHHHHHHHHHhccCCCc-cccccccccCCCCHHHHHHHHHHHh----cCCCCcccCccHHHHHHHHHHH
Confidence            3478999999999999998876655422 1123333344457777777776554    4889999999999999999999


Q ss_pred             HHHHhCCCCC----CceEEcCChHHHHHHHHHHHHHHhhhh---cCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        184 CARMFNGGPE----TCGCMTSGGTESIMMACKAYRDYAREE---KGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       184 la~l~g~~~~----~~~~~t~ggteai~~a~~a~~~~~~~~---~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      +++++|++..    ..+.+|+|||+|+++++.+++.....+   .|. ..+.++++..+|.++.++|+++|++++.||++
T Consensus       102 la~L~~~p~~~~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~  181 (450)
T d1pmma_         102 VADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMR  181 (450)
T ss_dssp             HHHHTTCCCCTTSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCB
T ss_pred             HHHHhCCCccccCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeec
Confidence            9999998653    348999999999999999998765432   222 34456778889999999999999999999998


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH------HHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG------EKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la------~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                       .++.+|+++++++++++|++|+++.++|.||.++|+++|.++|      +++|+|+|||+|++|+..+|...    ...
T Consensus       182 ~~~~~~d~~~L~~~i~~~t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~----~~~  257 (450)
T d1pmma_         182 PGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP----DIV  257 (450)
T ss_dssp             TTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT----TCC
T ss_pred             CCCCcCcHHHHHHHhhhCceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeech----hhh
Confidence             4699999999999999999999999999999999999888885      55799999999999998887543    346


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      +++...++|++++|+||||++|.|+|+++++++......+.+.++|.++.+++.++.+||++..++++|+.++.+|.+||
T Consensus       258 ~~~~~~~aDSi~~s~HK~~~~p~g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~  337 (450)
T d1pmma_         258 WDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGY  337 (450)
T ss_dssp             CSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccceeEeecChhhccCCCCCeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHH
Confidence            78888999999999999999999999999999998888777889999999999999999999888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCC
Q psy10210        409 VWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .+.+++..+.++++.+.|.+
T Consensus       338 ~~~~~~~~~la~~l~~~L~~  357 (450)
T d1pmma_         338 TKVQNASYQVAAYLADEIAK  357 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999998888777665544

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=6.9e-38  Score=315.97  Aligned_cols=323  Identities=13%  Similarity=0.112  Sum_probs=260.4

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM  183 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  183 (435)
                      ...+|+.+.+.+++++.+.+.+.....+|.++.+.+..+.+. .....+.+.+....+.|...++.+|...++|.++.+|
T Consensus        43 ~~~~P~~g~~~~~~l~~~~~~i~~~~~~~~~P~f~~~~~~~~-~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~w  121 (476)
T d1js3a_          43 PATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTAS-SYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDW  121 (476)
T ss_dssp             CSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCCC-CHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHH
T ss_pred             CcccCcCCCCHHHHHHHHHHHHhCCCCCCCCCCeeEeCCCCC-CHHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHH
Confidence            457899999999999999999988888898888877776543 3556666776666677889999999999999999999


Q ss_pred             HHHHhCCCCC--------CceEEcCChHHHHHHHHHHHHHHhhhh-----cCC------CCCeEEEeCCCchhHHHHHHH
Q psy10210        184 CARMFNGGPE--------TCGCMTSGGTESIMMACKAYRDYAREE-----KGI------SLPEIVLPTTAHPAFDKAANY  244 (435)
Q Consensus       184 la~l~g~~~~--------~~~~~t~ggteai~~a~~a~~~~~~~~-----~g~------~~~~viv~~~~~~~~~~~~~~  244 (435)
                      +++++|.+..        ..+++|+|||+|+..++.++|+....+     .|.      +++.+++++.+|+++.+++..
T Consensus       122 l~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~  201 (476)
T d1js3a_         122 LGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLI  201 (476)
T ss_dssp             HHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHH
T ss_pred             HHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHHHHHHHHh
Confidence            9999999642        468999999999999999998754321     122      356799999999999999999


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhc
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPF  318 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~  318 (435)
                      +|+.++.||+|+++++|+++|+++|++.      +.+|+.+.+++.+|.+||+++|+++|++||+|+|||+||||++.++
T Consensus       202 lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~  281 (476)
T d1js3a_         202 GGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFIC  281 (476)
T ss_dssp             HTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGS
T ss_pred             cCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccchhhhhh
Confidence            9999999999999999999999999752      5789999999999999999999999999999999999999998876


Q ss_pred             ccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCC
Q psy10210        319 MSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRS  389 (435)
Q Consensus       319 ~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~  389 (435)
                      .+..     .......++||+++|+|||++.|.++|+++++++......+...+.+..         ..+...++.+||+
T Consensus       282 ~~~~-----~~~~gi~~aDSit~d~HK~l~~P~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~  356 (476)
T d1js3a_         282 PEFR-----HLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRR  356 (476)
T ss_dssp             TTTG-----GGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCC
T ss_pred             cchh-----hhhcCCcccceeeecCccccccCCcceeecccchHHHHHHHhcChhhhccccccccccccccccccccchh
Confidence            4322     1112234579999999999999999999999997654433222222211         1234567889999


Q ss_pred             chHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh---cCCccccc
Q psy10210        390 GGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN---LSDLWLYL  433 (435)
Q Consensus       390 ~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~---l~~l~~~~  433 (435)
                      +.++ ..|++++.+|.+||.+.+++..+.++++.+.   .++++...
T Consensus       357 ~~al-~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~  402 (476)
T d1js3a_         357 FRSL-KMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA  402 (476)
T ss_dssp             CTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECS
T ss_pred             hHHH-HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEC
Confidence            8875 8999999999999999999988887776654   45555543

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.3e-30  Score=259.81  Aligned_cols=296  Identities=11%  Similarity=0.043  Sum_probs=220.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcCh---------hHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFP---------GVCKM  176 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~  176 (435)
                      .+|+.|.++++|.+.+.+....+.+.|... .+.+.+.+ ....+.+.+.+..+.++++.+.+.++         ...++
T Consensus        18 ~lP~~G~~~~~i~~~l~~~~~~d~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   95 (445)
T d3bc8a1          18 KCPEDGWDESTLELFLHELAVMDSNNFLGN-CGVGEREG-RVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKI   95 (445)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHTBGGGCTTC-CCCSSCCC-CCSCHHHHHHTTTCCSCBCC-------CCSBHHHHHHHHH
T ss_pred             CCCcCCCCHHHHHHHHHHHHhccCCcccCc-ccccccCc-cccHHHHHHHHHhhccccccCcchhhhhhhhccchHHHHH
Confidence            579999999999999998877766666532 22222211 12234455555555555554443332         35789


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe---
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR---  253 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp---  253 (435)
                      |.++.+|+++++|.+....+++|+|||++..+++.+.+..    ++.++++||++..+|+++.+++.+.|++.+.|+   
T Consensus        96 e~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~----~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          96 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRH----KRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHH----HCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHH----hCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            9999999999999988778999999997766655554321    234578899999999999999999999988885   


Q ss_pred             cCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        254 LTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       254 ~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      .++++.+|+++|+++|++    ++++|++++|+|++|.++|+++|+++|++||+++|+|+|+++++..+...     .+.
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~-----~~~  246 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHL-----IQQ  246 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-----HHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhcccc-----chh
Confidence            357789999999999863    68999999999999999999999999999999999999999876543221     133


Q ss_pred             CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHH
Q psy10210        330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV  409 (435)
Q Consensus       330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~  409 (435)
                      ++...++|++++|+||++++|.|.|+++++++.+.+...   ..          ..+++++.....+|+.++.+|.+++.
T Consensus       247 ~~~~~~vd~~~~s~hK~~~~p~g~~~l~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~  313 (445)
T d3bc8a1         247 GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KM----------YPGRASASPSLDVLITLLSLGCSGYR  313 (445)
T ss_dssp             HHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HH----------SCSCBCSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcCCcceEEecCccccccCCCCceeeeCChHHHHHHH---HH----------HhhcccCcchHHHHHHHHHHhhhcch
Confidence            444556899999999998899999998888877655421   11          22344555567899999999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy10210        410 WICVRYHFNYKSCLQN  425 (435)
Q Consensus       410 ~~~~~~~~~~~~~~~~  425 (435)
                      +..++..+.+..+.+.
T Consensus       314 ~~~~~~~~~~~~~~~~  329 (445)
T d3bc8a1         314 KLLKERKEMFVYLSTQ  329 (445)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHH
Confidence            8888776665544443

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.96  E-value=1.3e-27  Score=238.84  Aligned_cols=293  Identities=15%  Similarity=0.136  Sum_probs=215.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHh-------hcCCCCCCCCcCh--hHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGL-------TSYTNPLHPDIFP--GVCKM  176 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~-------~~~~~~~~~~~~~--~~~~~  176 (435)
                      .+|+.|.++.++.+.+.+....+.+.|......+...+..+  ...+.+....       .....+++|..++  ...++
T Consensus        37 ~lP~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~g~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  114 (434)
T d2z67a1          37 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTY--SKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYAL  114 (434)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECSSCCCCCS--CHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHhcCcccccccccccceecccc--hhHHhhcccccccccccccchhhhhhhhhhhHHHHHH
Confidence            57999999999999999988877677764433332222211  1222222111       1223456665543  45788


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec--
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL--  254 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~--  254 (435)
                      +.++..++++++|.+.. ...+..|+++++.+++.+.+....      +++|+++...|+++.+++...|++.+.|++  
T Consensus       115 ~~~~~~~~~~~~g~~~~-~~~~~~~t~~~~~~~l~a~r~~~~------~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~  187 (434)
T d2z67a1         115 TNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYG------SNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  187 (434)
T ss_dssp             HHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHC------CCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHhcCCCcc-eeecCcHHHHHHHHHHHHHHHhhc------CceEEEeccCCHHHHHHHHHhCCcceEEEeec
Confidence            99999999999998764 556667777777777777664332      457999999999999999999999888864  


Q ss_pred             -CCCccccHHHHHHHhhc-----CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        255 -TSSYTVDLAALQSAITG-----NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       255 -~~~~~~d~~~l~~~i~~-----~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                       ++++.+|+++|++++++     ++.+|++++|++++|.++|+++|+++|++||+++|+|+||+++...+...      +
T Consensus       188 ~~~~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~------~  261 (434)
T d2z67a1         188 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEK------L  261 (434)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH------H
T ss_pred             CCCccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhcccc------c
Confidence             46688999999999974     68899999999999999999999999999999999999998765432211      1


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      ......|+|++++|+||++++|.|.|+++++++.++++.   ...+          .++........+|+++..++.+++
T Consensus       262 ~~~~~~~~D~~~~s~hK~l~~~~g~~~~~~~~~~~~~~~---~~~~----------~~~~~~~~~~~~~a~l~~~~~~g~  328 (434)
T d2z67a1         262 KKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSY----------PGRASATPVVNTLVSLLSMGSKNY  328 (434)
T ss_dssp             HHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HTTS----------CSCBCSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCcceEEEcCccccccCCCccccccCcHHHHHHH---Hhhc----------ccccccchHHHHHHHHHHHHHhcc
Confidence            122345899999999999889999999888888776542   2222          233444556688999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy10210        409 VWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l  426 (435)
                      .+..++..+.++++.+.|
T Consensus       329 ~~~~~~~~~~a~~l~~~L  346 (434)
T d2z67a1         329 LELVKNQKNSKKLLDELL  346 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHH
Confidence            988887776665554444

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.5e-26  Score=223.26  Aligned_cols=263  Identities=21%  Similarity=0.199  Sum_probs=188.0

Q ss_pred             hHhHHHHHHHHHHh-hcCCCCCCCC--cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        145 QQDLVDLLTEVFGL-TSYTNPLHPD--IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       145 ~~~l~~~i~~~~~~-~~~~~~~~~~--~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                      .+.+++++.+++.. ..+.||....  ......++..++|+.+++++|++++ ++++|+|+|+++..++.++......  
T Consensus        15 ~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~-~I~~~~~~t~~l~~~~~~~~~~~~~--   91 (391)
T d1p3wa_          15 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSGATESDNLAIKGAANFYQK--   91 (391)
T ss_dssp             CHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHHHHHGG--
T ss_pred             CHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCC-cEEEECCHHHHHHHHHhhhhhhhcC--
Confidence            45566666655542 2233332211  1223456667889999999999876 8999999999999999887643222  


Q ss_pred             CCCCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        222 GISLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       222 g~~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                        ++++|+++++.|+++...+   +..|++++.+|.++++.+|+++++++++++|++|++++++||||.+.|+++|.++|
T Consensus        92 --~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~~~~~I~~~~  169 (391)
T d1p3wa_          92 --KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMC  169 (391)
T ss_dssp             --GCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBCCHHHHHHHH
T ss_pred             --CCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCCCCcEEEEEECCCCCCeeECCHHHHHHHh
Confidence              2346999999999976554   44599999999998889999999999999999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      ++||+++++|++|+.+..           ++|+...++|++++++||| +||.|+|+++++++.+...    .+.+.||.
T Consensus       170 ~~~~~~~ivD~~~~~g~~-----------~~d~~~~~~D~~~~s~~k~-~g~~g~g~~~~~~~~~~~~----~~~~~gg~  233 (391)
T d1p3wa_         170 RARGIIYHVDATQSVGKL-----------PIDLSQLKVDLMSFSGHKI-YGPKGIGALYVRRKPRVRI----EAQMHGGG  233 (391)
T ss_dssp             HHHTCEEEEECTTTBTTB-----------CCCTTTSCCSEEEEESTTT-TSCSSCEEEEECBTTBCCC----CCSSCSSC
T ss_pred             ccCCcEEEEeeccccCCc-----------cccchhccccccccccccc-cCCCceEEEEEecchhccc----CCcccCCc
Confidence            999999999999865433           7888889999999999999 6999999988777654432    44555555


Q ss_pred             CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210        379 YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL  429 (435)
Q Consensus       379 ~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l  429 (435)
                      .......++......++.-..+. ...+...+..+++.+....+.++|..+
T Consensus       234 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~  283 (391)
T d1p3wa_         234 HERGMRSGTLPVHQIVGMGEAYR-IAKEEMATEMERLRGLRNRLWNGIKDI  283 (391)
T ss_dssp             TTTTTSCSCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred             cccCcccCcchhhhhhhhhhhhh-HHHHHhhHHHHHHHHHHHHHHHHHHhh
Confidence            44334445444433322222222 222333344444444444555555544

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.94  E-value=7.2e-26  Score=222.05  Aligned_cols=268  Identities=16%  Similarity=0.141  Sum_probs=192.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~  223 (435)
                      +..+.+++.+.+.......+..........++..++++.+++++|++++ ++++|+|+|+|+.+++.++. .+++     
T Consensus        20 p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~~g~-----   93 (381)
T d1elua_          20 PTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPN-TITITDNVTTGCDIVLWGLDWHQGD-----   93 (381)
T ss_dssp             CHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEESSHHHHHHHHHHHSCCCTTC-----
T ss_pred             CHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcc-cEEEECChHHHhhhcchhhhhcCCc-----
Confidence            3456777777776543333444444556678888999999999999776 89999999999999998873 3444     


Q ss_pred             CCCeEEEeCCCchhHHH----HHHHcCCEEEEEecCCCcc--ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDK----AANYFGMKVKHIRLTSSYT--VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~~~~~~--~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                         +|++++++|++...    .++..|++++.+|.+.+..  .+.+.++++++++|+++++++++|+||.+.|+++|.++
T Consensus        94 ---~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~~~~~~~I~~l  170 (381)
T d1elua_          94 ---EILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAV  170 (381)
T ss_dssp             ---EEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHH
T ss_pred             ---eEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhcccccccccccccccccccchhhHHHHH
Confidence               49999999987554    4555799999999863322  23677888889999999999999999999999999999


Q ss_pred             HHHc----CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCC
Q psy10210        298 GEKY----GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD  373 (435)
Q Consensus       298 a~~~----~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~  373 (435)
                      |+++    ++++++|++++.+.           .++++...++|++++|+|||+++|.|+|+++++++.. +........
T Consensus       171 ~~~~~~~~~~~~~vD~~~~~g~-----------~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~-~~~~p~~~~  238 (381)
T d1elua_         171 CRRHQGNYPVRVLVDGAQSAGS-----------LPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCL-GEINPTYVG  238 (381)
T ss_dssp             HHHCCSSSCCEEEEECTTTBTT-----------BCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTG-GGCCCCSCC
T ss_pred             Hhhccccccccccccccccccc-----------ccccccccccccccccccccccccchhhHHHhhHHHH-HhcCccccc
Confidence            9985    69999999986543           3788888899999999999999999999977665543 322111122


Q ss_pred             CCCCCCC------------CCccccCCCchHHHHHHHHHHHhcHHH----HHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210        374 WPGGNYG------------SPSVSGSRSGGIIATCWAAMMYFGFEA----QVWICVRYHFNYKSCLQNLSDLWLYL  433 (435)
Q Consensus       374 ~~gg~~~------------~~~~~gsr~~~~ia~~~a~l~~~g~~g----~~~~~~~~~~~~~~~~~~l~~l~~~~  433 (435)
                      |....+.            .....|+++...+.++.+++..+...+    ..++..+..+.+.+.+++++++..+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  314 (381)
T d1elua_         239 WRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLA  314 (381)
T ss_dssp             TTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESC
T ss_pred             ccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecC
Confidence            2111000            011235566655566666666554433    33555556666777778888776654

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.9e-25  Score=219.72  Aligned_cols=272  Identities=17%  Similarity=0.173  Sum_probs=197.1

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      ++.+.+++.+.+... +.||.....  .....+..+++|+.+++++|+.+++++++|+|+|+++..++.++......   
T Consensus        35 p~~v~~~~~~~~~~~-~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~---  110 (405)
T d1jf9a_          35 PSQVIDAEAEFYRHG-YAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVR---  110 (405)
T ss_dssp             CHHHHHHHHHHHHHT-CCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHHHHHhc-cCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHHHHHHhcccccccC---
Confidence            445556665555442 334422111  12344666789999999999876669999999999999988875432211   


Q ss_pred             CCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                       ++++|++.+.+|++    +...++..|++++.+|+++++.+|++.++++++++|++|++++.+|.+|.+.|+++|.++|
T Consensus       111 -~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~~~t~lv~~~~v~~~tG~~~pi~~i~~~~  189 (405)
T d1jf9a_         111 -AGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLA  189 (405)
T ss_dssp             -TTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred             -CCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhccCCcEEEEEecCCCcccccCchHHhhhHH
Confidence             24679999999999    4555667799999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC--
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG--  376 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g--  376 (435)
                      +++|+++++|++++.+..           ++|+...++|++++|+||| +||.|+|+++++++.+. ........|..  
T Consensus       190 ~~~g~~~~vD~~q~~g~~-----------~id~~~~~~D~~~~s~hK~-~Gp~G~g~l~v~~~~~~-~~~~~~~~~~~~~  256 (405)
T d1jf9a_         190 HQHGAKVLVDGAQAVMHH-----------PVDVQALDCDFYVFSGHKL-YGPTGIGILYVKEALLQ-EMPPWEGGGSMIA  256 (405)
T ss_dssp             HHTTCEEEEECTTTTTTS-----------CCCHHHHTCSEEEEEGGGT-TSCSSCEEEEECHHHHT-TCCCSSCSSSSEE
T ss_pred             HHcCCeeecccceecccc-----------ccchhhcCCceeecccccc-ccCCCceeeeechhhhc-ccCcccccccccC
Confidence            999999999999865433           7888888999999999999 69999999777664322 21111111100  


Q ss_pred             -------CCCCC---CccccCCCchHHHHHHHHHH---HhcHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210        377 -------GNYGS---PSVSGSRSGGIIATCWAAMM---YFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLP  434 (435)
Q Consensus       377 -------g~~~~---~~~~gsr~~~~ia~~~a~l~---~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p  434 (435)
                             ..+..   .-..|+++...++++.++++   .+|.+...++.+.+.+.+...++.++.+..+.|
T Consensus       257 ~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~~~  327 (405)
T d1jf9a_         257 TVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGP  327 (405)
T ss_dssp             ECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESC
T ss_pred             ccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcccccCC
Confidence                   00000   11246777776666666655   456777777777777767766666665554433

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.93  E-value=9e-26  Score=222.16  Aligned_cols=218  Identities=17%  Similarity=0.140  Sum_probs=170.4

Q ss_pred             CCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210         99 AGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus        99 ~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      ..+++..+.|+. .+|+.+.+.+.+.++.+       ...|.+..|.+++|+++++++.+....+               
T Consensus        31 ~vi~l~~G~p~~-~~p~~v~~a~~~~~~~~-------~~~Y~~~~G~~~lR~aia~~~~~~~g~~---------------   87 (388)
T d1j32a_          31 DVCSFSAGEPDF-NTPKHIVEAAKAALEQG-------KTRYGPAAGEPRLREAIAQKLQRDNGLC---------------   87 (388)
T ss_dssp             CCEECCCSSCSS-CCCHHHHHHHHHHHHTT-------CCSCCCTTCCHHHHHHHHHHHHHHHCCC---------------
T ss_pred             CeEECCCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHhcccC---------------
Confidence            346677788887 55678999998887753       3456677899999999999987754332               


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--C
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--S  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~  256 (435)
                                 ..+ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|.+++.+|.+  .
T Consensus        88 -----------~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~  147 (388)
T d1j32a_          88 -----------YGA-DNILVTNGGKQSIFNLMLAMIEPGDE--------VIIPAPFWVSYPEMVKLAEGTPVILPTTVET  147 (388)
T ss_dssp             -----------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEESSCCTHHHHHHHHTTCEEEEECCCGGG
T ss_pred             -----------CCC-ceEEEcCCHHHHHHHHHHHHhCCCCE--------EEEcCCCcHHHHHHHHHhcCeEEEEeccccc
Confidence                       133 48999999999999999999888887        9999999999999999999999999886  4


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++.+|+++++++++++++++++++||||||.+   +.+++|+++|+++|+++|+|++|+.+...     +....++....
T Consensus       148 ~~~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~-----~~~~~s~~~~~  222 (388)
T d1j32a_         148 QFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYD-----DAQHLSIGAAS  222 (388)
T ss_dssp             TTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----TCCCCCGGGSC
T ss_pred             ccCCCHHHHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhccccc-----CCCCCCHHHhC
Confidence            56799999999999999999999999999998   77899999999999999999999877652     11111221111


Q ss_pred             C---CccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        334 P---GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       334 ~---gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      +   .-.++..|++|... .+..+|+++ .++++.+
T Consensus       223 ~~~~~~~i~~~S~SK~~~~~GlRvG~~~-~~~~~~~  257 (388)
T d1j32a_         223 PEAYERSVVCSGFAKTYAMTGWRVGFLA-GPVPLVK  257 (388)
T ss_dssp             HHHHHTEEEEEESTTTTTCTTTCCEEEE-CCHHHHH
T ss_pred             cccccceeEecCChhhhhcchhHeEEEE-ECHHHHH
Confidence            1   12566778999743 336689955 4555543

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=2.1e-25  Score=216.86  Aligned_cols=167  Identities=17%  Similarity=0.224  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT  255 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~  255 (435)
                      +...+++.+|+++|.+   .+++|+|||+|+.+++.++.+++|.        |+++.++|++...+++..|++++.+|++
T Consensus        48 l~~~~~~~~A~~~g~e---~~~~t~g~t~a~~~~~~al~~~gd~--------Vi~~~~~h~s~~~~~~~~g~~v~~v~~~  116 (364)
T d2e7ja1          48 IHDFIHNQLPKFLGCD---VARVTNGAREAKFAVMHSLAKKDAW--------VVMDENCHYSSYVAAERAGLNIALVPKT  116 (364)
T ss_dssp             HHHHHHTHHHHHTTSS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHHHTTCEEEEECCC
T ss_pred             HHHHHHHHHHHHhCcC---EEEEECcHHHHHHHHHHHHhCCCcE--------EEeecccccccchHHHhccceEEEeeec
Confidence            3445667889999873   6899999999999999999887776        9999999999999999999999999986


Q ss_pred             --CCccccHHHHHHHhhcC-----ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        256 --SSYTVDLAALQSAITGN-----TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       256 --~~~~~d~~~l~~~i~~~-----~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                        .++.+|+++++++++++     +++|++++|+||+|.+.|+++|+++|++||+++|+|++|+.+..           +
T Consensus       117 ~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~g~~-----------~  185 (364)
T d2e7ja1         117 DYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRM-----------P  185 (364)
T ss_dssp             CTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTB-----------C
T ss_pred             cccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeecchhheeccccccchhhccccchhhhh-----------h
Confidence              46789999999999643     46899999999999999999999999999999999999965433           4


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      .+....|+|++++|+||++++|.++|+++.+ +++..
T Consensus       186 ~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~-~~~~~  221 (364)
T d2e7ja1         186 VSLKEIGADFIVGSGHKSMAASGPIGVMGMK-EEWAE  221 (364)
T ss_dssp             CCHHHHTCSEEEEEHHHHSSCCSSCEEEEEC-TTTTT
T ss_pred             hcccccccceeeeccccccCCCCCEEEEEEC-HHHHH
Confidence            5666668999999999997666678885555 44443

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=8.6e-25  Score=214.61  Aligned_cols=216  Identities=19%  Similarity=0.143  Sum_probs=171.1

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+. .+|++|++.+.+.+..+       ..+|....|.+++|+++++++......+                
T Consensus        33 vi~l~~g~p~~-~~p~~i~~a~~~~~~~~-------~~~Y~~~~G~~~lR~~ia~~~~~~~~~~----------------   88 (382)
T d1b5pa_          33 LVALTAGEPDF-DTPEHVKEAARRALAQG-------KTKYAPPAGIPELREALAEKFRRENGLS----------------   88 (382)
T ss_dssp             CEECCCSSCSS-CCCHHHHHHHHHHHHTT-------CCSCCCTTCCHHHHHHHHHHHHHTTCCC----------------
T ss_pred             eEECCCCCCCC-CCCHHHHHHHHHHHhcC-------CcCCCCCCCCHHHHHHHHhhhhhhcccc----------------
Confidence            45667777876 55788999999888753       3456677899999999999987653321                


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~  257 (435)
                                .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|.+++.+|.+  ++
T Consensus        89 ----------~~~-~~i~it~G~~~al~~~~~~l~~~gd~--------vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  149 (382)
T d1b5pa_          89 ----------VTP-EETIVTVGGSQALFNLFQAILDPGDE--------VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEG  149 (382)
T ss_dssp             ----------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             ----------ccc-ccceecCCHHHHHHHHHHHhCCCCCE--------EEECCCCcHHHHHHHHHhcCeEEEEecccccc
Confidence                      233 48999999999999999999988877        9999999999999999999999999986  45


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                      +.+|+++++++++++++++++++||||||.+   +++++|+++|++||+++|+|++|+.+.+.     +....+... ..
T Consensus       150 ~~~d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~-~~  223 (382)
T d1b5pa_         150 FVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYE-----GEHFSPGRV-AP  223 (382)
T ss_dssp             TCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS-----SCCCCGGGT-CT
T ss_pred             cCCCHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecC-----CCCCCHHHc-CC
Confidence            6889999999999999999999999999999   77899999999999999999999987652     222222222 22


Q ss_pred             CccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210        335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~  365 (435)
                      .-.+...|+.|... ++..+|+++. ++++.+
T Consensus       224 ~~~i~~~s~SK~~~~~GlR~G~~~~-~~~~i~  254 (382)
T d1b5pa_         224 EHTLTVNGAAKAFAMTGWRIGYACG-PKEVIK  254 (382)
T ss_dssp             TTEEEEEESTTTTTCGGGCCEEEEC-CHHHHH
T ss_pred             CCEEEEecchhhccCcHhheEEEEE-CHHHHH
Confidence            33566678889743 3467899654 444443

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.92  E-value=1.1e-24  Score=214.04  Aligned_cols=214  Identities=17%  Similarity=0.138  Sum_probs=168.6

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.+..+.|+. .+|+.+.+.+.+.++.+       ..+|++..|.+++|+++++++........               
T Consensus        27 vi~l~~g~p~~-~~p~~v~~~~~~a~~~~-------~~~Y~~~~G~~~lr~aia~~~~~~~~~~~---------------   83 (388)
T d1gdea_          27 VISLGIGEPDF-DTPQHIKEYAKEALDKG-------LTHYGPNIGLLELREAIAEKLKKQNGIEA---------------   83 (388)
T ss_dssp             CEECCCCSCCS-CCCHHHHHHHHHHHHTT-------CCSCCCTTCCHHHHHHHHHHHHHHHCCCC---------------
T ss_pred             eEECCCCCCCC-CCCHHHHHHHHHHHhcC-------ccCCCCCcCCHHHHHHHHHHHHhhccccC---------------
Confidence            45667777876 45678889888887743       33466778999999999999876433221               


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~  257 (435)
                                 .+++++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|++  ++
T Consensus        84 -----------~~~~~i~~t~G~~~~l~~~~~~l~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~  144 (388)
T d1gdea_          84 -----------DPKTEIMVLLGANQAFLMGLSAFLKDGEE--------VLIPTPAFVSYAPAVILAGGKPVEVPTYEEDE  144 (388)
T ss_dssp             -----------CTTTSEEEESSTTHHHHHHHTTTCCTTCE--------EEEEESCCTTHHHHHHHHTCEEEEEECCGGGT
T ss_pred             -----------CChheeeeccCcchHHHHHHHHhcCCCCE--------EEECCCCcHHHHHHHHHcCCEEEEeecccccC
Confidence                       23348999999999999999999888887        9999999999999999999999999986  45


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-  332 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-  332 (435)
                      +.+|+++++++++++++++++++||||||.+   +++++|+++|++|+++||+|++|+.+...     +.+.+++ ... 
T Consensus       145 ~~~d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~-----~~~~~~~~~~~~  219 (388)
T d1gdea_         145 FRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYD-----DARHYSIASLDG  219 (388)
T ss_dssp             TCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT-----TCCCCCGGGSTT
T ss_pred             CCCCHHHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhc-----cCCCCChhhccC
Confidence            6899999999999999999999999999999   67899999999999999999999987552     1111121 111 


Q ss_pred             CCCccEEEecCCCCCC-ccCCcEEEEEeC
Q psy10210        333 LPGVTSISVDTHKYGF-TPKGSSVVLYRD  360 (435)
Q Consensus       333 ~~gvd~~~~s~hK~~~-~p~g~g~il~~~  360 (435)
                      ..+-.++..|++|... +...+|+++..+
T Consensus       220 ~~~~~i~~~S~SK~~~~~GlR~G~ii~~~  248 (388)
T d1gdea_         220 MFERTITVNGFSKTFAMTGWRLGFVAAPS  248 (388)
T ss_dssp             CGGGEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred             CCCeEEEEeCChhhccCccccEEEEEeec
Confidence            1123567778999743 447789955544

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.92  E-value=7.7e-24  Score=209.58  Aligned_cols=268  Identities=18%  Similarity=0.187  Sum_probs=199.3

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCC--CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHP--DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG  222 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g  222 (435)
                      .+.+.+++.+.+... +.|+...  .......++.+++++.+++++|+++++.+++|+++++++.++..++......   
T Consensus        35 p~~v~~~~~~~~~~~-~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~n~~~~~~~~~~~~---  110 (408)
T d1t3ia_          35 PRAVLEKLMHYYEND-NANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLK---  110 (408)
T ss_dssp             CHHHHHHHHHHHHHT-CCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCC---
T ss_pred             CHHHHHHHHHHHHhc-CCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHHHHHHhhccccccC---
Confidence            345555666555543 2333221  1123445667788999999999987668999999999999988775432221   


Q ss_pred             CCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        223 ISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       223 ~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                       ++++|++++.+|++.    ...++..|.+++.+|.+.++..+.+.++++++++|++|++++.+|.+|.+.|+++|.++|
T Consensus       111 -~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~t~lv~i~~~~~~tG~~~p~~~i~~~~  189 (408)
T d1t3ia_         111 -AGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLA  189 (408)
T ss_dssp             -TTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHH
T ss_pred             -CCCEEEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccCCCceEEEEecccccccccCcHHHHhhhh
Confidence             235699999999984    445566799999999988888999999999999999999999999999999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      +++|+++|+|++++.+.           .++|+...++|++++|+||| +||.|+|+++++++... .    .+.+.+|.
T Consensus       190 ~~~g~~~ivDa~q~~g~-----------~~id~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~-~----~~p~~~g~  252 (408)
T d1t3ia_         190 HQAGAKVLVDACQSAPH-----------YPLDVQLIDCDWLVASGHKM-CAPTGIGFLYGKEEILE-A----MPPFFGGG  252 (408)
T ss_dssp             HHTTCEEEEECTTTTTT-----------SCCCHHHHTCSEEEEEGGGT-TSCTTCEEEEECHHHHH-H----SCCCSCST
T ss_pred             hccCceeeeccceeccc-----------ccccccccCCceEEeccccc-cCCCCccccccchhhhh-c----CCceecCC
Confidence            99999999999986543           37888888999999999999 68999999777765432 2    22222221


Q ss_pred             CC------------C---CccccCCCchHHHHHHHHH---HHhcHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210        379 YG------------S---PSVSGSRSGGIIATCWAAM---MYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLP  434 (435)
Q Consensus       379 ~~------------~---~~~~gsr~~~~ia~~~a~l---~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p  434 (435)
                      ..            .   .-..|+++...++++-+++   ..+|.+...++..++.+.+.+.++.++++..+.|
T Consensus       253 ~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~  326 (408)
T d1t3ia_         253 EMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGP  326 (408)
T ss_dssp             TSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESC
T ss_pred             cccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCC
Confidence            10            0   0124677776665555554   4568888888888888888888888877765543

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=1.8e-22  Score=197.28  Aligned_cols=224  Identities=21%  Similarity=0.201  Sum_probs=169.6

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+.+.+++.+++... +.||.... .+....++..++|+.+++++|++++ ++++++|+|+++..++.++......    
T Consensus        14 p~~v~ea~~~~~~~~-~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~-~i~~~~~~T~~l~~~~~~~~~~~~~----   87 (376)
T d1eg5a_          14 DDRVLEEMIVFYREK-YGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFTSCATESINWILKTVAETFEK----   87 (376)
T ss_dssp             CHHHHHHHHHHHHTC-CCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEESCHHHHHHHHHHHHHHHTTT----
T ss_pred             CHHHHHHHHHHHHHc-CCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-cEEEECCHHHHHHhhhhcccccccc----
Confidence            456777777776643 44553322 1234556667889999999999876 8999999999999998876433222    


Q ss_pred             CCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK  300 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~  300 (435)
                      ++.+|+++...|+.+...   ++..|++++.+|+++++.+|+++++++++++|++|++++++|+||.+.+++++.++++.
T Consensus        88 ~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~i~~~~~~  167 (376)
T d1eg5a_          88 RKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKK  167 (376)
T ss_dssp             TCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHH
T ss_pred             cCcccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcCCCceEEEEECCccccceeeeehhhhhhhhh
Confidence            234577777777775544   45569999999999999999999999999999999999999999999999999999876


Q ss_pred             c--CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210        301 Y--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN  378 (435)
Q Consensus       301 ~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~  378 (435)
                      +  ++.+++|++++...           .++|+...++|++++++||| +||.|.|+++++++..      ..|.+.|+.
T Consensus       168 ~~~~~~~~vD~~q~~g~-----------~~~d~~~~~~D~~~~s~~K~-~gp~G~~~l~~~~~~~------~~p~~~g~~  229 (376)
T d1eg5a_         168 KNKETLVHVDAVQTIGK-----------IPFSLEKLEVDYASFSAHKF-HGPKGVGITYIRKGVP------IRPLIHGGG  229 (376)
T ss_dssp             HCTTCEEEEECTTTTTT-----------SCCCCTTTCCSEEEEEGGGG-TSCTTCEEEEECTTSC------CCCSBCSSC
T ss_pred             cccCceeEEEeeecccc-----------ccccccccCccceeccccee-ecCCCceeEEeccCcc------cCCcccCCC
Confidence            6  89999999985443           37888888999999999999 6999999977765432      234455544


Q ss_pred             CCCCccccCCCchH
Q psy10210        379 YGSPSVSGSRSGGI  392 (435)
Q Consensus       379 ~~~~~~~gsr~~~~  392 (435)
                      .......+..+...
T Consensus       230 ~~~~~~~~~~~~~~  243 (376)
T d1eg5a_         230 QERGLRSGTQNVPG  243 (376)
T ss_dssp             TTTTTBCSCCCHHH
T ss_pred             CcccccCCcccchh
Confidence            33333444444433

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2e-22  Score=195.95  Aligned_cols=212  Identities=15%  Similarity=0.166  Sum_probs=162.7

Q ss_pred             cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210        103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK  182 (435)
Q Consensus       103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  182 (435)
                      +..+-|+. ++|..|.+.+.+.+..+       .++|....| +++++++++++.+..+.+                   
T Consensus         4 ~~~~~~df-~~p~~i~eal~~~~~~~-------~~~Y~~~~g-~~lr~~ia~~~~~~~g~~-------------------   55 (361)
T d1d2fa_           4 FTISDMDF-ATAPCIIEALNQRLMHG-------VFGYSRWKN-DEFLAAIAHWFSTQHYTA-------------------   55 (361)
T ss_dssp             CCSSSCSS-CCCHHHHHHHHHHHTTC-------CCCCCCSCC-HHHHHHHHHHHHHHSCCC-------------------
T ss_pred             cCCCCCCC-CCCHHHHHHHHHHHhCC-------CCCCCCCCC-HHHHHHHHHHHHHHhCCC-------------------
Confidence            44566776 66678999999887542       345666666 579999999888754332                   


Q ss_pred             HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---CCcc
Q psy10210        183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---SSYT  259 (435)
Q Consensus       183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---~~~~  259 (435)
                             .++ +++++|+|+++++..++.++.++++.        |++++|+|+.+...++..|.+++.++.+   +++.
T Consensus        56 -------~~~-~~i~it~G~~~~l~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  119 (361)
T d1d2fa_          56 -------IDS-QTVVYGPSVIYMVSELIRQWSETGEG--------VVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWF  119 (361)
T ss_dssp             -------CCG-GGEEEESCHHHHHHHHHHHSSCTTCE--------EEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEE
T ss_pred             -------CCc-ceEEEeCCHHHHHHHHhhhccccccc--------cccccccccchhHHHHhhcceEEeecccccccccc
Confidence                   123 48999999999999999999888877        9999999999999999999999999875   4556


Q ss_pred             ccHHHHHHHhh-cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        260 VDLAALQSAIT-GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       260 ~d~~~l~~~i~-~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      +|++.+++.+. ++++++++++||||||.+   +.+++|+++|+++|+++|+|++|..+.+.     +....++.....+
T Consensus       120 ~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~-----~~~~~~~~~~~~~  194 (361)
T d1d2fa_         120 CDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG-----EQPHIPWSNVARG  194 (361)
T ss_dssp             CCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS-----SSCCCCGGGTCCS
T ss_pred             cccccchhhcccCCceeEEecccccccccccchhhhhhhhhhhhhhheeeeecccccccccc-----ccccccccccccc
Confidence            89999999885 478999999999999988   56899999999999999999999987652     1111222222233


Q ss_pred             ccEEEecCCCC-CCccCCcEEEEEeCCcc
Q psy10210        336 VTSISVDTHKY-GFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       336 vd~~~~s~hK~-~~~p~g~g~il~~~~~~  363 (435)
                      -.++..++.|. +.+..++|++++.++..
T Consensus       195 ~~v~~~s~SK~~~~~g~R~g~~~~~~~~~  223 (361)
T d1d2fa_         195 DWALLTSGSKSFNIPALTGAYGIIENSSS  223 (361)
T ss_dssp             SEEEEECSHHHHTCGGGCCEEEEECSHHH
T ss_pred             ccccccccccccccccccceeeecchhHH
Confidence            45666677774 34456789877766544

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.90  E-value=5.9e-23  Score=202.30  Aligned_cols=215  Identities=18%  Similarity=0.171  Sum_probs=167.5

Q ss_pred             CccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210        101 LEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus       101 ~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      +.+..+.|.  .-.+|+.+++.+.+.+..+       ...|....|.+++++++++++.+....+               
T Consensus        33 i~l~~G~P~~~df~~p~~i~~a~~~a~~~~-------~~~Y~~~~G~~~LR~aia~~~~~~~g~~---------------   90 (395)
T d1xi9a_          33 IRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-------HNYYGDSEGLPELRKAIVEREKRKNGVD---------------   90 (395)
T ss_dssp             EECCCCCGGGTTCCCCHHHHHHHHHHHHTT-------CCSCCCTTCCHHHHHHHHHHHHHHHCCC---------------
T ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHhhhhccccc---------------
Confidence            455556562  1256788999999888643       3446678899999999999998764332               


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--C
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--S  256 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~  256 (435)
                                 .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|++++.+|.+  +
T Consensus        91 -----------~~~-~~i~i~~G~~~~~~~~~~~~~~~Gd~--------vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~  150 (395)
T d1xi9a_          91 -----------ITP-DDVRVTAAVTEALQLIFGALLDPGDE--------ILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE  150 (395)
T ss_dssp             -----------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHHTTCEEEEEEEEGGG
T ss_pred             -----------ccc-cccccccccchhhhhhhhhhcCCCCE--------EEEcCCccccchhhhhhcCCEEEEEeccccc
Confidence                       123 48999999999999999999988877        9999999999999999999999999875  5


Q ss_pred             CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      ++.+|++++++.+.++++++++++||||||.+   +.+++|+++|++|++++++|++|..+.+.     +....+.....
T Consensus       151 ~~~~d~~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~  225 (395)
T d1xi9a_         151 DWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE-----GEHISPGSLTK  225 (395)
T ss_dssp             TSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS-----SCCCCHHHHCS
T ss_pred             cccchHHHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccccccc-----ccccchhhcCC
Confidence            67899999999999999999999999999999   67899999999999999999999876542     11111222222


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCCc
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLK  362 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~  362 (435)
                      ..-.++..|++|... .+..+|++++.++.
T Consensus       226 ~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~  255 (395)
T d1xi9a_         226 DVPVIVMNGLSKVYFATGWRLGYMYFVDPE  255 (395)
T ss_dssp             SSCEEEEEESTTTTCCGGGCCEEEEEECTT
T ss_pred             CCCEEEEeCcchhcccchhhcEeeEecCHH
Confidence            222466668999633 34668987766543

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=2.8e-23  Score=202.56  Aligned_cols=232  Identities=20%  Similarity=0.175  Sum_probs=169.2

Q ss_pred             hhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhH
Q psy10210         69 ARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDL  148 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l  148 (435)
                      ..++-.+++.+..+++.+.++.        +.+++..+.|+. .+|+.+++.+.+.+..        ..+|.+..|.+++
T Consensus         4 ~~~~~~~~~~~~~~~~~la~~~--------~~I~ls~g~p~~-~~p~~i~~al~~~l~~--------~~~Y~~~~G~~el   66 (368)
T d1v2da_           4 HPRTEAAKESIFPRMSGLAQRL--------GAVNLGQGFPSN-PPPPFLLEAVRRALGR--------QDQYAPPAGLPAL   66 (368)
T ss_dssp             CGGGGGC---CHHHHHHHHHHH--------TCEECCCCSCSS-CCCHHHHHHHHHHTTT--------SCSCCCTTCCHHH
T ss_pred             ChhhhhcCCCHHHHHHHHhccC--------CCEEecCCCCCC-CCCHHHHHHHHHHhhc--------ccCCCCCcCCHHH
Confidence            3444455566666766655442        234556677876 5678899988887643        2346677789999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeE
Q psy10210        149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEI  228 (435)
Q Consensus       149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~v  228 (435)
                      |+++++++.                                .++ +++++|+|+++++.+++.++..+++.        |
T Consensus        67 r~aiA~~~~--------------------------------~~~-~~Iiit~G~~~al~~~~~~l~~~~d~--------v  105 (368)
T d1v2da_          67 REALAEEFA--------------------------------VEP-ESVVVTSGATEALYVLLQSLVGPGDE--------V  105 (368)
T ss_dssp             HHHHHHHHT--------------------------------SCG-GGEEEESSHHHHHHHHHHHHCCTTCE--------E
T ss_pred             HHHHHhhcc--------------------------------cCC-cceeeccchHHHHHHHhhcccccccc--------c
Confidence            999988763                                133 38999999999999999999887776        9


Q ss_pred             EEeCCCchhHHHHHHHcCCEEEEEecC---CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcC
Q psy10210        229 VLPTTAHPAFDKAANYFGMKVKHIRLT---SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYG  302 (435)
Q Consensus       229 iv~~~~~~~~~~~~~~~g~~v~~vp~~---~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~  302 (435)
                      ++++|+|+.+...++..|.+++.++++   +++.+|+++++++++++++++++++||||||.+   +++++|+++|++||
T Consensus       106 ~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~  185 (368)
T d1v2da_         106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHD  185 (368)
T ss_dssp             EEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred             cccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999998875   457799999999999999999999999999999   56889999999999


Q ss_pred             CcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC-CCCCccCCcEEEEEeCCcccc
Q psy10210        303 IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH-KYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       303 ~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h-K~~~~p~g~g~il~~~~~~~~  365 (435)
                      +++++|++|+.+...      ...+...........+..++. |++.+...+|++ +.++++.+
T Consensus       186 i~ii~D~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~-~~~~~~~~  242 (368)
T d1v2da_         186 LFLISDEVYDELYYG------ERPRRLREFAPERTFTVGSAGKRLEATGYRVGWI-VGPKEFMP  242 (368)
T ss_dssp             CEEEEECTTTTCBSS------SCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEE-ECCTTTHH
T ss_pred             Ceeeechhhhhhccc------ccccccccccccccceeecccccccccccccccc-cccccccc
Confidence            999999999765442      111111111122233334444 465555778995 45555543

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.90  E-value=1.3e-22  Score=200.94  Aligned_cols=229  Identities=14%  Similarity=0.137  Sum_probs=167.8

Q ss_pred             CCccccCCCCCC---CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210        100 GLEYFLELPSQG---RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus       100 ~~~~~~~~P~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      .+.+..+.|+.+   ..++.+++.+.+.+...      ...+|.+..|.++||+++++++.+.... ...+.        
T Consensus        32 vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~LReaia~~~~~~~~~-~~~~~--------   96 (412)
T d1bw0a_          32 IIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQ------ECNGYFPTVGSPEAREAVATWWRNSFVH-KEELK--------   96 (412)
T ss_dssp             CEECCCCCTTTTSCSCCCHHHHHHHHHHHHTT------CSSSCCCTTCCHHHHHHHHHHHHHHHCC-STTTG--------
T ss_pred             cEECcCCCCCCCCCccccHHHHHHHHHHhhCC------CCCCCCCCcCCHHHHHHHHHHHHHhcCc-ccccC--------
Confidence            355666666532   34567788887776642      2345778889999999999999875321 11000        


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-  255 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-  255 (435)
                                 .+.++ +++++|+|+++++.++++++.++++.        |++++|+|+.+...++..|++++.+|++ 
T Consensus        97 -----------~~~~~-~~I~it~G~~~al~~~~~~l~~~Gd~--------Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~  156 (412)
T d1bw0a_          97 -----------STIVK-DNVVLCSGGSHGILMAITAICDAGDY--------ALVPQPGFPHYETVCKAYGIGMHFYNCRP  156 (412)
T ss_dssp             -----------GGCCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHTTCEEEEEEEEG
T ss_pred             -----------CCCCC-CeEEEecccccchhhhhhhhhccccc--------eeeeeccchhhhhhhhccCcccccccccc
Confidence                       01123 48999999999999999999988887        9999999999999999999999999986 


Q ss_pred             -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                       .++..+++++++++.++++++++++||||||.+   +++++|.++|++|+++|++|++|.++.+.-...........+.
T Consensus       157 ~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~  236 (412)
T d1bw0a_         157 ENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF  236 (412)
T ss_dssp             GGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS
T ss_pred             ccccchhhHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCcccccccccc
Confidence             456789999999999999999999999999999   7789999999999999999999998765211000000001111


Q ss_pred             CCCCccEEEecCCCC-CCccCCcEEEEEeCCcc
Q psy10210        332 SLPGVTSISVDTHKY-GFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       332 ~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~~  363 (435)
                      ......++..++.|. +..+..+|+++..++..
T Consensus       237 ~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~  269 (412)
T d1bw0a_         237 ETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHG  269 (412)
T ss_dssp             CCSCCEEEEEESTTTTSCGGGCCEEEEEECTTC
T ss_pred             ccccccccccccCccCccCCCCcccccccchhh
Confidence            111123445567785 44557899988776543

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.89  E-value=7.7e-23  Score=202.97  Aligned_cols=242  Identities=14%  Similarity=0.100  Sum_probs=178.5

Q ss_pred             hhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHH
Q psy10210         70 RKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLV  149 (435)
Q Consensus        70 ~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~  149 (435)
                      +++..+.+.+..++.++..+.        ..+++..+.|+. .+|+.+++.+.+.+....    ....+|....|.+++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~--------~~I~L~~G~Pd~-~~p~~i~eal~~a~~~~~----~~~~~Y~~~~G~~~lR   72 (418)
T d2r5ea1           6 KRYQGSTKSVWVEYIQLAAQY--------KPLNLGQGFPDY-HAPKYALNALAAAANSPD----PLANQYTRGFGHPRLV   72 (418)
T ss_dssp             GGGTTCCCCHHHHHHHHHHHH--------CCEECSSSCCSS-CCCHHHHHHHHHHHTCSC----GGGGSCCCTTCCHHHH
T ss_pred             hhhcCCCCCHHHHHHHHhcCC--------CCEEccCCCCCC-CCCHHHHHHHHHHHhCCC----ccCcCCCCCCCCHHHH
Confidence            344444445555665544432        235566777886 557889999988876432    1244577888999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEE
Q psy10210        150 DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIV  229 (435)
Q Consensus       150 ~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~vi  229 (435)
                      +++++++.+....+                          ..+.++|++|+|+++|+.+++.++.++++.        |+
T Consensus        73 eaiA~~~~~~~g~~--------------------------~~p~~~I~it~G~~~al~~~~~~l~~~gd~--------vl  118 (418)
T d2r5ea1          73 QALSKLYSQLVDRT--------------------------INPMTEVLVTVGAYEALYATIQGHVDEGDE--------VI  118 (418)
T ss_dssp             HHHHHHHHHHHTSC--------------------------CCTTTSEEEESHHHHHHHHHHHHHCCTTCE--------EE
T ss_pred             HHHHHHHHHHhCCC--------------------------CCccceEEEcCCCchhhhhhhhhccccccc--------ee
Confidence            99999998754332                          133358999999999999999999988887        99


Q ss_pred             EeCCCchhHHHHHHHcCCEEEEEecCCC----------ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHH
Q psy10210        230 LPTTAHPAFDKAANYFGMKVKHIRLTSS----------YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAK  296 (435)
Q Consensus       230 v~~~~~~~~~~~~~~~g~~v~~vp~~~~----------~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~  296 (435)
                      +++|+|+.+...+...|.+++.||++.+          +..+.+++.+...++++++++++||||||.+   +.+++|++
T Consensus       119 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~  198 (418)
T d2r5ea1         119 IIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVAN  198 (418)
T ss_dssp             EEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             ccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhh
Confidence            9999999999999999999999998522          3578888888888899999999999999999   67889999


Q ss_pred             HHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-CCCccEEEecCCCCC-CccCCcEEEEEeCCccc
Q psy10210        297 LGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       297 la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~  364 (435)
                      +|++|++++|+|++|..+...     +...+.+ ... ...-.+...|+.|.. +++..+|+++. ++++.
T Consensus       199 ~a~~~~~~iI~De~y~~~~~~-----~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~-~~~~i  263 (418)
T d2r5ea1         199 LCKKWNVLCVSDEVYEHMVFE-----PFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYG-PEALL  263 (418)
T ss_dssp             HHHHHTCEEEEECTTTTCBCT-----TCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEES-CHHHH
T ss_pred             hhhcCCeeeecccchhhhccC-----CCccccccccccccceeeeeecCCccccCCCcccccccc-cchhh
Confidence            999999999999999877652     1111111 111 112345556777864 35578999554 44543

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.88  E-value=3.8e-22  Score=196.32  Aligned_cols=217  Identities=16%  Similarity=0.138  Sum_probs=166.7

Q ss_pred             CCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210         99 AGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus        99 ~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      ..+.+..+.|+. ++|++|++.+.+.++.+       ..+|.  .|.++||+++++++.+....+               
T Consensus        32 ~vi~l~~g~pdf-~~p~~v~~al~~~~~~~-------~~~Y~--~g~~~Lr~aia~~~~~~~g~~---------------   86 (394)
T d1c7na_          32 EVVPLSVADMEF-KNPPELIEGLKKYLDET-------VLGYT--GPTEEYKKTVKKWMKDRHQWD---------------   86 (394)
T ss_dssp             TCCCCCSSSCSS-CCCHHHHHHHHHHHHHC-------CCSSB--CCCHHHHHHHHHHHHHHHCCC---------------
T ss_pred             CeEEccCCCCCC-CCCHHHHHHHHHHHhCC-------CcCCC--CCCHHHHHHHHHHHHHhcCCC---------------
Confidence            346677788887 67889999999887753       22332  367899999999998654332               


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---  255 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---  255 (435)
                                 .++ +++++|+|+++++.+++.++.++++.        |++++|.|+.+...++..|.+.+.++..   
T Consensus        87 -----------~~~-~~I~vt~G~~~al~~~~~~~~~pgd~--------vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~  146 (394)
T d1c7na_          87 -----------IQT-DWIINTAGVVPAVFNAVREFTKPGDG--------VIIITPVYYPFFMAIKNQERKIIECELLEKD  146 (394)
T ss_dssp             -----------CCG-GGEEEESSHHHHHHHHHHHHCCTTCE--------EEECSSCCTHHHHHHHTTTCEEEECCCEEET
T ss_pred             -----------CCC-cceEeeccchhhhhhhhccccccccc--------cccccCcccchhhHHhhhhhccccccccccc
Confidence                       133 48999999999999999999998887        9999999999999999999999888764   


Q ss_pred             CCccccHHHHHHHhh-cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF  331 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~  331 (435)
                      ..+.+|.+.++.++. ++++++++++||||||.+   +.+++|+++|++|+++||+|++|..+++.     +....+...
T Consensus       147 ~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~-----~~~~~~~~~  221 (394)
T d1c7na_         147 GYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMP-----GYEHTVFQS  221 (394)
T ss_dssp             TEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCT-----TCCCCCGGG
T ss_pred             ccccchhhhhhhhhccccceEEEecccccccceeccHHHhhhhhccccccceeEeccccccccccC-----Cccccchhh
Confidence            345688888888775 579999999999999999   67889999999999999999999988652     111111111


Q ss_pred             CC---CCccEEEecCCCC-CCccCCcEEEEEeCCcccc
Q psy10210        332 SL---PGVTSISVDTHKY-GFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       332 ~~---~gvd~~~~s~hK~-~~~p~g~g~il~~~~~~~~  365 (435)
                      ..   ....+++.|+.|. +.++.++|+++..++.+.+
T Consensus       222 ~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~~i~~  259 (394)
T d1c7na_         222 IDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRE  259 (394)
T ss_dssp             SCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH
T ss_pred             hhcccccceeecccccccccccccccccccccChhhhh
Confidence            11   1235666788886 3355778887777766654

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=8.8e-23  Score=200.47  Aligned_cols=215  Identities=15%  Similarity=0.124  Sum_probs=162.2

Q ss_pred             CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210        101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV  180 (435)
Q Consensus       101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~  180 (435)
                      +.+..+.|+. .+|+.+.+.+.+..        .+...|....|.+++|+++++++.......                 
T Consensus        31 i~l~~G~p~~-~~p~~~~~al~~~~--------~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~-----------------   84 (389)
T d2gb3a1          31 HHLNIGQPDL-KTPEVFFERIYENK--------PEVVYYSHSAGIWELREAFASYYKRRQRVD-----------------   84 (389)
T ss_dssp             EECSSCCCCS-CCCTHHHHHHHHTC--------CSSCCCCCTTCCHHHHHHHHHHHHHTSCCC-----------------
T ss_pred             EECCCCCCCC-CCCHHHHHHHHhcC--------CCCCCCCCCcCCHHHHHHHHHHHHHhcCCC-----------------
Confidence            5566777876 45677888776532        224567788899999999999998753321                 


Q ss_pred             HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCcc
Q psy10210        181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYT  259 (435)
Q Consensus       181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~  259 (435)
                               .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...++..|..++.++.+ .++.
T Consensus        85 ---------~~~-~~I~it~G~~~~l~~~~~~l~~~gd~--------V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~  146 (389)
T d2gb3a1          85 ---------VKP-ENVLVTNGGSEAILFSFAVIANPGDE--------ILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGF  146 (389)
T ss_dssp             ---------CCG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             ---------ccc-ceEEecccccccccccccccccCCCe--------EEEeCCCCccccccccccCcccccccccccccc
Confidence                     133 38999999999999999999988877        9999999999999999999999999987 3444


Q ss_pred             ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210        260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV  336 (435)
Q Consensus       260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv  336 (435)
                      .+.+.+...+.++++++++++||||||.+   +++++|.++|++|++++|+|++|+.+...     +.......... .-
T Consensus       147 ~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-----~~~~~~~~~~~-~~  220 (389)
T d2gb3a1         147 AIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR-----GEFASALSIES-DK  220 (389)
T ss_dssp             CCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS-----SCCCCGGGSCC-TT
T ss_pred             chhhhhhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccc-----ccccccccccc-cc
Confidence            55566777777899999999999999998   77999999999999999999999877652     11111122222 23


Q ss_pred             cEEEecCCCC-CCccCCcEEEEEeCCcccc
Q psy10210        337 TSISVDTHKY-GFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       337 d~~~~s~hK~-~~~p~g~g~il~~~~~~~~  365 (435)
                      ..+..|+.|. +.+...+|+++..++.+..
T Consensus       221 ~~v~~s~sK~~~~~GlRiG~~~~~~~~i~~  250 (389)
T d2gb3a1         221 VVVIDSVSKKFSACGARVGCLITRNEELIS  250 (389)
T ss_dssp             EEEEEESTTTTTCGGGCCEEEECSCHHHHH
T ss_pred             ccccccccccccCcccceeeeeccchhHHH
Confidence            4455565554 4444778997766655443

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=9.1e-22  Score=192.17  Aligned_cols=214  Identities=14%  Similarity=0.110  Sum_probs=167.8

Q ss_pred             CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+++..+.|+. .+|+.+.+.+.+.+..+       ..+|+...|.+++|+++++++...... +.              
T Consensus        30 vI~l~~G~p~~-~~p~~i~~~~~~~~~~~-------~~~Y~~~~G~~~lR~aia~~~~~~~~~-~~--------------   86 (375)
T d1o4sa_          30 VINLTAGEPDF-PTPEPVVEEAVRFLQKG-------EVKYTDPRGIYELREGIAKRIGERYKK-DI--------------   86 (375)
T ss_dssp             CEECCCSSCSS-CCCHHHHHHHHHHHTTC-------CCCCCCTTCCHHHHHHHHHHHHHHHTC-CC--------------
T ss_pred             eEECCCcCCCC-CCCHHHHHHHHHHHhcC-------CcCCCCCcCCHHHHHHHHhhhhhcccc-cc--------------
Confidence            45667777876 45688999998877642       345778889999999999998865432 11              


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS  257 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~  257 (435)
                                 ++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...+...|.....++.+  .+
T Consensus        87 -----------~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~  146 (375)
T d1o4sa_          87 -----------SP-DQVVVTNGAKQALFNAFMALLDPGDE--------VIVFSPVWVSYIPQIILAGGTVNVVETFMSKN  146 (375)
T ss_dssp             -----------CG-GGEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEECCGGGT
T ss_pred             -----------cc-ccccccCcHHHHHHHHHHHHhCCCCE--------EEEccCccccchhhhhcccccccccccccccc
Confidence                       23 48999999999999999999988877        9999999999999999999999998886  56


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCC
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSL  333 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~  333 (435)
                      +.+|.+.+++...++++++++++||||||.+   +.+++|+++|++|+++|++|++|+.+...     +....... ...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~  221 (375)
T d1o4sa_         147 FQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYT-----DEFTSILDVSEG  221 (375)
T ss_dssp             TCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCS-----SCCCCHHHHCSS
T ss_pred             ccchhHHHHHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhcccccc-----ccccccccccCC
Confidence            6788999999888999999999999999999   77899999999999999999999866542     11111111 122


Q ss_pred             CCccEEEecCCCCCC-ccCCcEEEEEeCC
Q psy10210        334 PGVTSISVDTHKYGF-TPKGSSVVLYRDL  361 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~  361 (435)
                      .+-.++..|+.|... +...+|+++..++
T Consensus       222 ~~~~i~~~S~SK~~~l~G~R~G~~~~~~~  250 (375)
T d1o4sa_         222 FDRIVYINGFSKSHSMTGWRVGYLISSEK  250 (375)
T ss_dssp             STTEEEEEESTTTTTCGGGCCEEEECCHH
T ss_pred             CCCEEEEeechhhccCCcccccccccccc
Confidence            334677788999633 4577899554443

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=2.9e-22  Score=198.87  Aligned_cols=224  Identities=16%  Similarity=0.124  Sum_probs=164.7

Q ss_pred             CCCCccccCCCCCCCC-HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210         98 NAGLEYFLELPSQGRN-RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM  176 (435)
Q Consensus        98 ~~~~~~~~~~P~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~  176 (435)
                      ...+++..+.|+.... ++.+.+.+.+.+....    .....|....|.++||+++++++.+....+..           
T Consensus        38 ~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----------  102 (420)
T d1vp4a_          38 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEY----HYTLQYSTTEGDPVLKQQILKLLERMYGITGL-----------  102 (420)
T ss_dssp             TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSH----HHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSC-----------
T ss_pred             CCcEecCCcCCCCccCCHHHHHHHHHHHHhhCC----ccccCCCCCcCCHHHHHHHHHHHHHHhCCCCC-----------
Confidence            4456778888886544 4444555555554321    11345778889999999999999876433221           


Q ss_pred             HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210        177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS  256 (435)
Q Consensus       177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~  256 (435)
                                     +.+++++|+|+++++.+++.++.++++.        |++++|.|+.+...++..|++++.+|.++
T Consensus       103 ---------------~~~~I~it~G~~~al~~~~~~~~~~Gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~  159 (420)
T d1vp4a_         103 ---------------DEDNLIFTVGSQQALDLIGKLFLDDESY--------CVLDDPAYLGAINAFRQYLANFVVVPLED  159 (420)
T ss_dssp             ---------------CGGGEEEEEHHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHTTTCEEEEEEEET
T ss_pred             ---------------CHHHeEeccchhhhHHHHHHhhhccccc--------cccccccccchhHHHHHHhhhcccccccc
Confidence                           2248999999999999999999888877        99999999999999999999999999875


Q ss_pred             CccccHHHHHHHhh---------cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        257 SYTVDLAALQSAIT---------GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       257 ~~~~d~~~l~~~i~---------~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .+ +|++.++..+.         +.+.++++++||||||.+   +++++|+++|++|++++++|++|..+.+.     +.
T Consensus       160 ~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~-----~~  233 (420)
T d1vp4a_         160 DG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYE-----GE  233 (420)
T ss_dssp             TE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCS-----SC
T ss_pred             cc-cccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhcccc-----Cc
Confidence            44 67777665442         234567788999999998   67899999999999999999999887542     11


Q ss_pred             CCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        325 PLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       325 ~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      ...+ ......+..++..++.|++..+..+|+++ .++++.+.
T Consensus       234 ~~~~~~~~~~~~~~i~~~s~sk~~~~G~RiG~~~-~~~~~i~~  275 (420)
T d1vp4a_         234 TVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVA-GSKEFIRK  275 (420)
T ss_dssp             CCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEE-CCHHHHHH
T ss_pred             ccccccccccccceeEEecccccccccccccccc-ccchhhhh
Confidence            1111 12223455677778899976567889954 56665544

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3e-21  Score=189.15  Aligned_cols=175  Identities=12%  Similarity=0.149  Sum_probs=147.9

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH--HHHHHc
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD--KAANYF  245 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~--~~~~~~  245 (435)
                      +.++.+.++..++++.+++++|.+.+..+++|+|||+++.+++.++..+++.        +++....|.+..  ..+...
T Consensus        45 HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~  116 (388)
T d1h0ca_          45 SMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGDS--------FLVGANGIWGQRAVDIGERI  116 (388)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCSSCC--------EEECBSSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhccCCc--------eeeecccceeeeeccccccc
Confidence            4678899999999999999999987767999999999999999999877766        888888888743  334555


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +..+..++.+....+|.+++++.+. .+++++++++.+|.+|.+.|+++|.++|++||+++++|++++.+.         
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g~---------  187 (388)
T d1h0ca_         117 GARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGG---------  187 (388)
T ss_dssp             C--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTTTT---------
T ss_pred             cccccccccCCccccchHHHHHHhccCCcceEEEeeeeeccccccCHHHHHHHhhcccccceecccccccc---------
Confidence            7777777777667788888877654 589999999999999999999999999999999999999986443         


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL  361 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~  361 (435)
                        .++|+...++|++++++|||+++|.|+|++++++.
T Consensus       188 --~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~  222 (388)
T d1h0ca_         188 --TPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDK  222 (388)
T ss_dssp             --SCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHH
T ss_pred             --ccccccccccceecccccccccCCCceEEEeecHH
Confidence              37888899999999999999889999998666654

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=4.5e-21  Score=187.79  Aligned_cols=240  Identities=15%  Similarity=0.103  Sum_probs=182.5

Q ss_pred             hhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhH
Q psy10210         69 ARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDL  148 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l  148 (435)
                      .+++|.+...+..++.+..+.        ...+++..+.|+.+ +|+.+.+.+.+.+..+       ..+|.+..|.+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~a~~--------~~~i~l~~G~Pd~~-~p~~i~~a~~~~~~~~-------~~~Y~~~~G~~~L   68 (382)
T d1u08a_           5 QSKLPQLGTTIFTQMSALAQQ--------HQAINLSQGFPDFD-GPRYLQERLAHHVAQG-------ANQYAPMTGVQAL   68 (382)
T ss_dssp             CCSCCCCCCCHHHHHHHHHHH--------TTCEECCCSSCSSC-CCHHHHHHHHHHHHTT-------CCSCCCTTCCHHH
T ss_pred             hhhCCCCCCcHHHHHHHHhcc--------CCCEEccCCCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCcCCHHH
Confidence            467888888888887776533        12366777889874 5788999998887753       3467788899999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeE
Q psy10210        149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEI  228 (435)
Q Consensus       149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~v  228 (435)
                      |+++++++.+....+                          ..++.++++|+|+++++.+++.++.++++.        |
T Consensus        69 Reaia~~~~~~~g~~--------------------------~~~~~~I~vt~G~~~al~~~~~~l~~~gd~--------v  114 (382)
T d1u08a_          69 REAIAQKTERLYGYQ--------------------------PDADSDITVTAGATEALYAAITALVRNGDE--------V  114 (382)
T ss_dssp             HHHHHHHHHHHHSCC--------------------------CCTTTTEEEESSHHHHHHHHHHHHCCTTCE--------E
T ss_pred             HHHHHHHHHHHhCCC--------------------------CCCCceEEeccchHHHHHHHHhhcccccce--------E
Confidence            999999998754332                          123346999999999999999999988887        9


Q ss_pred             EEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCc
Q psy10210        229 VLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIP  304 (435)
Q Consensus       229 iv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~  304 (435)
                      ++++|.|+.+...+...|..+..++.+ .++.+|++++++++.++++++++++||||||.+   +.+++|.++|++++++
T Consensus       115 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~  194 (382)
T d1u08a_         115 ICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIF  194 (382)
T ss_dssp             EEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCE
T ss_pred             EEecccccchhhhhhhccccceecccccccccCCHHHHhhhhccCccEEEECCCCcccccccccccchhhhhhhccccce
Confidence            999999999999999999999888887 567789999999999999999999999999999   5678888999999999


Q ss_pred             EEEeccccchhhhcccccCCCCCC-CCC-CCCCccEEEecCCCC-CCccCCcEEEEEeCCccc
Q psy10210        305 VHVDCCLGGFLAPFMSAAGYPLPP-FDF-SLPGVTSISVDTHKY-GFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       305 livD~~~~~~~~~~~~~~g~~~~~-~d~-~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~~~  364 (435)
                      ++.|+.|..+...     +..... ... ....-.++..++.|. +.++..+|+++. ++++.
T Consensus       195 ii~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~-~~~~~  251 (382)
T d1u08a_         195 VISDEVYEHINFS-----QQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA-PAPIS  251 (382)
T ss_dssp             EEEECTTTTCBCC-----SSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEEC-CHHHH
T ss_pred             eeeecchhhcccc-----ccccccccccccccCcEEEEeeccccccCCcccchhhhc-cchhH
Confidence            9999998765442     111001 000 001124556666674 445578999664 44443

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.4e-21  Score=190.98  Aligned_cols=220  Identities=16%  Similarity=0.108  Sum_probs=167.5

Q ss_pred             CCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210         99 AGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus        99 ~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      +.+++..+.|+. .+|+.+.+.+.+.+..+     .....|.+..|.+++|+++++++.+....+ +             
T Consensus        26 dvI~l~~G~p~~-~~p~~v~~a~~~al~~~-----~~~~~Y~~~~G~~~LReaia~~~~~~~g~~-~-------------   85 (418)
T d1w7la_          26 DVVNLGQGFPDF-PPPDFAVEAFQHAVSGD-----FMLNQYTKTFGYPPLTKILASFFGELLGQE-I-------------   85 (418)
T ss_dssp             CCEECCCCSCSS-CCCHHHHHHHHHHTSSC-----GGGGSCCCTTCCHHHHHHHHHHHHHHHTCC-C-------------
T ss_pred             CCEECCCCCCCC-CCCHHHHHHHHHHHhCC-----CcccCCCCCcCCHHHHHHHHHHHHHHhCCC-C-------------
Confidence            346677788887 44778888888876642     113347777899999999999988753321 1             


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---  255 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---  255 (435)
                                  ++.++|++|+|+++++.++++++.++++.        |++++|.|+.+...+...|++++.++.+   
T Consensus        86 ------------~~~~~I~it~G~~~al~~~~~~l~~~g~~--------vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~  145 (418)
T d1w7la_          86 ------------DPLRNVLVTVGGYGALFTAFQALVDEGDE--------VIIIEPFFDCYEPMTMMAGGRPVFVSLKPGP  145 (418)
T ss_dssp             ------------CHHHHEEEESHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHHHHTTCEEEEEECEECC
T ss_pred             ------------CcccceeeccCcHHHHHHHHHhhccCCce--------eeccccccchhHHHHHHcCCEeecccccccc
Confidence                        22247999999999999999999988877        9999999999999999999999988753   


Q ss_pred             ---------CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        256 ---------SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       256 ---------~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                               .++.+|.+++.....++++++++++||||||.+   +.+++|.++|++|++++|+|++|..+.+.     +
T Consensus       146 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~-----~  220 (418)
T d1w7la_         146 IQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYD-----G  220 (418)
T ss_dssp             ---CCSEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT-----T
T ss_pred             ccccccccccCcccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcC-----C
Confidence                     245678888888888899999999999999998   77899999999999999999999887652     1


Q ss_pred             CCCCC-CCCCCC-CccEEEecCCCC-CCccCCcEEEEEeCCccc
Q psy10210        324 YPLPP-FDFSLP-GVTSISVDTHKY-GFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       324 ~~~~~-~d~~~~-gvd~~~~s~hK~-~~~p~g~g~il~~~~~~~  364 (435)
                      ....+ ..+... .-.++..|+.|. +.....+|+++.. +++.
T Consensus       221 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~-~~~~  263 (418)
T d1w7la_         221 HQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGP-DHIM  263 (418)
T ss_dssp             CCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECC-HHHH
T ss_pred             CCCCCHHHccccccccceecccCccccCCCCcccccccc-hhhh
Confidence            11111 122221 235667788896 3345789996554 4443

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.85  E-value=2.9e-20  Score=184.70  Aligned_cols=222  Identities=12%  Similarity=0.093  Sum_probs=159.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhCCC----CCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHH
Q psy10210        106 ELPSQGRNRLEILELVSNYLARGH----YDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVI  181 (435)
Q Consensus       106 ~~P~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  181 (435)
                      +.-++.+..+.+.+.+.+......    .........|....|.++||+++++++.+..... ..               
T Consensus        42 ~~aen~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~-~~---------------  105 (428)
T d1iaya_          42 GLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGR-VR---------------  105 (428)
T ss_dssp             SSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTC-SC---------------
T ss_pred             ecccCccchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCC-CC---------------
Confidence            445555777777777765322111    0000123457778899999999999998753321 11               


Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cCCEEEEEecC--CCc
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-FGMKVKHIRLT--SSY  258 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g~~v~~vp~~--~~~  258 (435)
                              .++ +++++|+|+++++.+++.++.++++.        |++++|+|+++...+.. .|++++.++++  .++
T Consensus       106 --------~~~-e~Ivit~G~~~al~~~~~~l~~~Gd~--------Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~  168 (428)
T d1iaya_         106 --------FDP-ERVVMAGGATGANETIIFCLADPGDA--------FLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNF  168 (428)
T ss_dssp             --------CCT-TSCEEEEHHHHHHHHHHHHHCCTTCE--------EEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTT
T ss_pred             --------CCh-hhEEEcCCHHHHHHHHHHHhCCCCCE--------EEEccCCchHHHHHHHHhcCCeEEEeeccccccc
Confidence                    123 38999999999999999999988887        99999999999887765 48999999987  467


Q ss_pred             cccHHHHHHHh------hcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210        259 TVDLAALQSAI------TGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF  329 (435)
Q Consensus       259 ~~d~~~l~~~i------~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~  329 (435)
                      .+|+++++.++      ..+++++++++||||||.+   +++++|.++|++||++||+|++|+.+.+.     +....++
T Consensus       169 ~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~-----~~~~~s~  243 (428)
T d1iaya_         169 KITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD-----TPQFVSI  243 (428)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS-----SSCCCCH
T ss_pred             ccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccC-----ccccccc
Confidence            89998887654      3468899999999999998   56899999999999999999999987652     1111110


Q ss_pred             ---------CCCCCCccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210        330 ---------DFSLPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       330 ---------d~~~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~  365 (435)
                               ......-.++..|++|.. .+...+|+++..++.+.+
T Consensus       244 ~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~~  289 (428)
T d1iaya_         244 AEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVN  289 (428)
T ss_dssp             HHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHH
T ss_pred             ccccchhhccccccceEEEEecCCCcccCCCcccccccccccchhh
Confidence                     011122356777899963 344678997766665544

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.84  E-value=6.5e-21  Score=187.87  Aligned_cols=219  Identities=14%  Similarity=0.041  Sum_probs=159.1

Q ss_pred             CCccccCCCCCCC-CHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210        100 GLEYFLELPSQGR-NRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA  178 (435)
Q Consensus       100 ~~~~~~~~P~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~  178 (435)
                      .+.+..|.|+... +.+.+.+.+.+.+....    +....|+...|.+++|+++++++.+....+               
T Consensus        31 ~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~---------------   91 (403)
T d1wsta1          31 VISLAGGLPAPETFPVETIKKIAVEVLEEHA----DKALQYGTTKGFTPLRLALARWMEKRYDIP---------------   91 (403)
T ss_dssp             CEECCCCCCCGGGSCHHHHHHHHHHHHHHSH----HHHHSCCCSSCCHHHHHHHHHHHHHHHCCC---------------
T ss_pred             cEECCCCCCCccccCHHHHHHHHHHHHHhCc----ccccCCCCCcCCHHHHHHHHHHHHHHhCCC---------------
Confidence            4567778887544 34455555666554321    124567888899999999999998754331               


Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                                 .++ +++++|+|+++++.+++.++.++++.        |++++|+|+.+...+...|++++.+|.++++
T Consensus        92 -----------~~~-~~I~it~G~~~al~~~~~~l~~~gd~--------v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~  151 (403)
T d1wsta1          92 -----------MSK-VEIMTVAGSQQALDLIGRVFLNPGDP--------IVVEAPTYLAAIQAFKYYDPEFISIPLDDKG  151 (403)
T ss_dssp             -----------CTT-CEEEEESSHHHHHHHHHHHHCCTTCE--------EEEEESCCHHHHHHHHTTCCEEEEEEEETTE
T ss_pred             -----------CCh-HHeeecccchHHHHHHHHHHhhcCCc--------cccCCCcchhhhHHHhhccccceeEeecccC
Confidence                       133 48999999999999999999888777        9999999999999999999999999987433


Q ss_pred             cccHHHH----HH---HhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        259 TVDLAAL----QS---AITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       259 ~~d~~~l----~~---~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      . +...+    ++   ..++.+.++++++||||||.+   +++++|+++|++||++||+|++|+.+.+.     +.+..+
T Consensus       152 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~-----~~~~~~  225 (403)
T d1wsta1         152 M-RVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYS-----GEPTPP  225 (403)
T ss_dssp             E-CHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS-----SCCCCC
T ss_pred             C-ccccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecC-----CCCCCc
Confidence            1 22221    12   223356788889999999998   67889999999999999999999887653     222222


Q ss_pred             CC-CCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        329 FD-FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       329 ~d-~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      +. ....+..+++.|++|...++.++|+++. ++++.
T Consensus       226 ~~~~~~~~~~i~~~S~SK~~~~G~RiG~~i~-~~~~i  261 (403)
T d1wsta1         226 IKHFDDYGRVIYLGTFSKILAPGFRIGWVAA-HPHLI  261 (403)
T ss_dssp             GGGGCSSSCEEEEEESTTTTCGGGCCEEEEE-CHHHH
T ss_pred             ccccCCCCcEEEEccccceecCccccccccc-chHHH
Confidence            22 2234567778899998654578899665 44443

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.83  E-value=1.9e-20  Score=184.20  Aligned_cols=275  Identities=14%  Similarity=0.077  Sum_probs=178.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      +..+.+++.+++... +.|+.... ......++.+++++.+++++|++++ ++++|+++|+++..++.+....... ++ 
T Consensus        40 p~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~~~-ei~~~~~~T~~~~~~~~~~~~~~~~-~~-  115 (404)
T d1qz9a_          40 PVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLIGARDG-EVVVTDTTSINLFKVLSAALRVQAT-RS-  115 (404)
T ss_dssp             BTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEECSCHHHHHHHHHHHHHHHHHH-HS-
T ss_pred             CHHHHHHHHHHHHHH-hcccCcccccchhHHHHHHHHHHHHHHHhCCCCC-cEEEecCchHHHHHHhhhhhhhhcc-cC-
Confidence            345566666655432 22221110 0112346677899999999999987 8999999999999887654322111 11 


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI  303 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~  303 (435)
                      .+.++++.+..|++........+.++..++.+.++..+++.++++++++|++|++++.+|.||.+.|+++|+++|+++|+
T Consensus       116 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~T~lV~i~~v~~~tG~~~pv~~i~~~~~~~~~  195 (404)
T d1qz9a_         116 PERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGA  195 (404)
T ss_dssp             TTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTC
T ss_pred             CCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcCCCceEEEEecccccccceecHHHHhcccccccc
Confidence            12347777777777555555444454445554556678899999999999999999999999999999999999999999


Q ss_pred             cEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC------
Q psy10210        304 PVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG------  377 (435)
Q Consensus       304 ~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg------  377 (435)
                      .+++|.+++.+..           +++....++|++++++|||+++|.|.+.+++.++............|.+.      
T Consensus       196 ~~~vD~~q~~g~~-----------~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (404)
T d1qz9a_         196 LAIWDLAHSAGAV-----------PVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAM  264 (404)
T ss_dssp             EEEEECTTTTTTS-----------CCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCC
T ss_pred             ceeEEeecccccc-----------ccccccccceEEEEechhhcccCCceEEEEEechhhhhhCCccccccCCccccccc
Confidence            9999999865433           77888889999999999998777765445666665543311111111100      


Q ss_pred             --CC-----CCCccccCCCchHHH---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh---cCCcccccC
Q psy10210        378 --NY-----GSPSVSGSRSGGIIA---TCWAAMMYFGFEAQVWICVRYHFNYKSCLQN---LSDLWLYLP  434 (435)
Q Consensus       378 --~~-----~~~~~~gsr~~~~ia---~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~---l~~l~~~~p  434 (435)
                        .+     ......++.......   .....+..++.+...++...+......+...   .+++..+.|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~i~~p  334 (404)
T d1qz9a_         265 EPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTP  334 (404)
T ss_dssp             CSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSC
T ss_pred             cccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhccCCCEEEECC
Confidence              00     001112233333332   2333444577788888887777776666543   455555544

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.83  E-value=3.3e-20  Score=184.52  Aligned_cols=225  Identities=14%  Similarity=0.066  Sum_probs=156.1

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHhC-----CCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210        105 LELPSQGRNRLEILELVSNYLAR-----GHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE  179 (435)
Q Consensus       105 ~~~P~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~  179 (435)
                      .+.-++.+..+.+.+.+.+....     ...........|..+.|.++||+++++++.++...+ ..             
T Consensus        41 l~~~en~l~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~-~~-------------  106 (431)
T d1m7ya_          41 MGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNK-VT-------------  106 (431)
T ss_dssp             CSSCCCCSCHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTS-SC-------------
T ss_pred             eecccccccHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCC-CC-------------
Confidence            35556656666666666542110     000111123457788899999999999998764321 11             


Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cCCEEEEEecC--C
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-FGMKVKHIRLT--S  256 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g~~v~~vp~~--~  256 (435)
                                .++ +++++|+|+++++.+++.++.+++|.        |++++|+|+.+...+.. .|++++.++++  .
T Consensus       107 ----------~~p-e~I~it~G~~~al~~~~~~l~~pGd~--------Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~  167 (431)
T d1m7ya_         107 ----------FDP-NHLVLTAGATSANETFIFCLADPGEA--------VLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSN  167 (431)
T ss_dssp             ----------CCG-GGEEEEEHHHHHHHHHHHHHCCTTCE--------EEEEESCCTTHHHHTTTTTCCEEEEEECCGGG
T ss_pred             ----------CCc-ceEEECCCHHHHHHHHHHHhcCCCCE--------EEEeCCCchhHHHHHHHhcCceeccccccchh
Confidence                      123 48999999999999999999988887        99999999999888875 58999999987  3


Q ss_pred             CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC----
Q psy10210        257 SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG----  323 (435)
Q Consensus       257 ~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g----  323 (435)
                      ++.+|++++++++.+      +++++++++||||||.+   +.+++|.++|++||+++|+|++|+.+.+.-.....    
T Consensus       168 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~  247 (431)
T d1m7ya_         168 GFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEV  247 (431)
T ss_dssp             TSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHH
T ss_pred             cccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHH
Confidence            467899999887753      68899999999999999   67899999999999999999999987652000000    


Q ss_pred             CCCCCCCC--CCCCccEEEecCCCCCC-ccCCcEEEEEeCCc
Q psy10210        324 YPLPPFDF--SLPGVTSISVDTHKYGF-TPKGSSVVLYRDLK  362 (435)
Q Consensus       324 ~~~~~~d~--~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~  362 (435)
                      ......+.  ....-.++..|++|... .+..+|+++..++.
T Consensus       248 ~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~  289 (431)
T d1m7ya_         248 LKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDM  289 (431)
T ss_dssp             TTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHH
T ss_pred             hhhcccccccccCceEEEEecCcccccCCCCccceeccchhh
Confidence            00000000  00112466678999743 34678996665443

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=9.2e-19  Score=171.75  Aligned_cols=327  Identities=14%  Similarity=0.095  Sum_probs=217.2

Q ss_pred             hhhchhhHHHHHHHHHHHH----HHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCC
Q psy10210         69 ARKIPAVRKKLEEETGKVA----KLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYY  144 (435)
Q Consensus        69 ~~~lp~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g  144 (435)
                      ++++|...+.++++|+.+.    +++.++++....  .-...+|+. .++.++++.+.+..+++..-. .+..+.+.+..
T Consensus         1 m~y~p~s~~d~~~mL~~iG~~s~~dl~~~IP~~~~--~~~~~lp~~-~sE~e~~r~~~~ls~kN~~~~-~~fig~G~~~~   76 (437)
T d1wyua1           1 MDYTPHTEEEIREMLRRVGAASLEDLFAHLPKEIL--SPPIDLPEP-LPEWKVLEELRRLAAQNLPAH-KAFLGGGVRSH   76 (437)
T ss_dssp             CCCCCCCHHHHHHHHHHHTCSSTGGGGTTSCGGGS--SCCCCCCCC-CCHHHHHHHHHHHHHTSCCCT-TCCCCSSCCCC
T ss_pred             CCCCCcCHHHHHHHHHHcCCCCHHHHHHhccHHHh--cCCCCCCCC-CCHHHHHHHHHHHHhCCCCcC-ccccCcccCCc
Confidence            4789999999999998876    445445444332  223467765 899999999999988763221 23344333332


Q ss_pred             -hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        145 -QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       145 -~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                       .|...+.+...-+-+....|++|+..++..++..++.+++++++|.+.. +.-.-.|++.....++.+.+ ...     
T Consensus        77 ~~p~~i~~~~~~~~~~t~ytPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~-n~s~~~ga~a~~~~~~~~~~-~~~-----  149 (437)
T d1wyua1          77 HVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIA-NASMYDGATALAEGVLLALR-ETG-----  149 (437)
T ss_dssp             CCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEE-CSCBSSHHHHHHHHHHHHHH-HHT-----
T ss_pred             eeCHHHHHHHhChhhhhhCCCcchHHHHHHHHHHHHHHHHHHHhhCCCcc-ccCchHHHHHHHHHHHHHHh-hhc-----
Confidence             4444455554333333345999999999999999999999999999754 45555666655554444433 322     


Q ss_pred             CCCeEEEeCCCchhHHH----HHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDK----AANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                       +.+++++...|+....    .++..|++++.+|.++.+ .+.++    +++++++|++++||+ .|.+++++++.++++
T Consensus       150 -~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~~-~~~~~----~~~~~Aavmi~~Pnt-~G~~ed~~~i~~~~h  222 (437)
T d1wyua1         150 -RMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR-TPLPE----VGEEVGAVVVQNPNF-LGALEDLGPFAEAAH  222 (437)
T ss_dssp             -CCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB-CCCCC----CCTTEEEEEEESSCT-TSBCCCHHHHHHHHH
T ss_pred             -ccccccccccChHHhhhhhhhcccceeeEEeeeccccc-chhhh----hccceeEEEEccccc-cccccchHHHHHHhh
Confidence             2358999999987543    356679999999986543 33332    567999999999987 899999999999999


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCCccccccccccCCCC
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDLKYKHCQYFVTSDWP  375 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~~~~~~~~~~~~~~~  375 (435)
                      +.|..+++|...-....           .-.....|+|++..+.++++    +|+++.|++.++++-.+ .    .|...
T Consensus       223 ~~G~l~~~~ad~~al~~-----------l~~Pg~~GaDi~~g~~q~fg~p~g~GGP~~G~~a~~~~l~r-~----lPgri  286 (437)
T d1wyua1         223 GAGALFVAVADPLSLGV-----------LKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVR-Q----LPGRL  286 (437)
T ss_dssp             HTTCEEEEECCTTGGGT-----------BCCHHHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGG-G----CCSCC
T ss_pred             hccceEEeeechhhhhc-----------cccccccccceEeeccceeccccCCCcCccccccccchhhc-c----ccccc
Confidence            99999888876432211           11223448999999955543    23345688777764322 2    22222


Q ss_pred             CC-------C--C---------------CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        376 GG-------N--Y---------------GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       376 gg-------~--~---------------~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                      .|       .  |               ++.+ .|+-.+..+..+|+.+..+|.+|+++..++...++.++.++|.++.
T Consensus       287 vg~s~d~~G~~~~~l~lqtreqhIrRekatsn-ict~q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~  364 (437)
T d1wyua1         287 VSETVDVEGRRGFILTLQAREQYIRRAKAKSN-ITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVP  364 (437)
T ss_dssp             EEEEEBTTSCEEEEECCGGGSHHHHGGGSSCC-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             cccccccCCcccceeecccccccccccccccc-hhhHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcC
Confidence            11       0  0               0111 1222333334677788999999999999999888888877776553

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.82  E-value=9.5e-20  Score=176.36  Aligned_cols=175  Identities=10%  Similarity=0.058  Sum_probs=136.2

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCc-eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcCC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETC-GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFGM  247 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~-~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g~  247 (435)
                      +...++.+++++.+++++|++++.. +++|+|||+++.+++.++..+++.        +++....+..  ....++..+.
T Consensus        29 ~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  100 (361)
T d1m32a_          29 DYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDK--------VLIVSNGAYGARMVEMAGLMGI  100 (361)
T ss_dssp             HHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCC--------EEEEESSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhhhhccc--------cceeeehhhhhhHHHHhhhhhc
Confidence            4455667789999999999987633 788899999999999888655554        5555444433  3344555566


Q ss_pred             EEEEEecCCCcc--ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        248 KVKHIRLTSSYT--VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       248 ~v~~vp~~~~~~--~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      ....+.......  .+.+.......++++++.+++.+|.||.+.|+++|.++|++||+++++|++++.+.          
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa~qs~G~----------  170 (361)
T d1m32a_         101 AHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGG----------  170 (361)
T ss_dssp             CEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTT----------
T ss_pred             ccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchhhhhhhhhhcccceeeEeecccccCc----------
Confidence            666666543333  34444555567899999999999999999999999999999999999999986543          


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                       .++|+...++|++++++|||+++|.|+|+++++++.+.
T Consensus       171 -~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~  208 (361)
T d1m32a_         171 -IPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLA  208 (361)
T ss_dssp             -SCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHT
T ss_pred             -ccccccccccceEEeeecccccCCCCceEEEechhhhh
Confidence             37899999999999999999999999999888865443

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=5.3e-19  Score=172.57  Aligned_cols=240  Identities=13%  Similarity=0.047  Sum_probs=168.6

Q ss_pred             cChhHHHHHHHHHHHHHHHhCCC---CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHH
Q psy10210        169 IFPGVCKMEAEVIKMCARMFNGG---PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAAN  243 (435)
Q Consensus       169 ~~~~~~~~e~~~~~~la~l~g~~---~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~  243 (435)
                      ..+.+.++..++++.+.++++..   ..+.+++|+|||+++++++.++.....     ++++|++....+++  +...++
T Consensus        30 r~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~-----~gd~vlv~~~~~~~~~~~~~~~  104 (382)
T d2bkwa1          30 TSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKA-----PNKNVLVVSTGTFSDRFADCLR  104 (382)
T ss_dssp             TSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTC-----SCCEEEEECSSHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcC-----CCCceEEEEechhhhhhhhhcc
Confidence            35666777777788888888752   234799999999999999999853211     23459998888877  445567


Q ss_pred             HcCCEEEEEecC-CCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcC--CcEEEeccccchhhhcc
Q psy10210        244 YFGMKVKHIRLT-SSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG--IPVHVDCCLGGFLAPFM  319 (435)
Q Consensus       244 ~~g~~v~~vp~~-~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~--~~livD~~~~~~~~~~~  319 (435)
                      ..|..+..+... .....+.+.+++++. .+++++++++.+|.||...+++++.+.|++++  +++++|++++.+.    
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~~vDa~qs~g~----  180 (382)
T d2bkwa1         105 SYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGC----  180 (382)
T ss_dssp             HTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTT----
T ss_pred             ccccccccccccCCCCccchhHHHHHhhhccchheeeeeccccccccccchhhhhhccccccceeeeeeccccccc----
Confidence            778888777644 444577888877765 57899999999999999999999999998875  8999999986543    


Q ss_pred             cccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC---------------CCCcc
Q psy10210        320 SAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY---------------GSPSV  384 (435)
Q Consensus       320 ~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~---------------~~~~~  384 (435)
                             .|+|+...|+|++++|+||++++|+|+|+++++++.+.+........+..+.|               .....
T Consensus       181 -------~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (382)
T d2bkwa1         181 -------EEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAY  253 (382)
T ss_dssp             -------SCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCC
T ss_pred             -------ccccccccCeeEEeecccccCcCCCchhhhhccHHHHhhhhhcccCCCcccchhhhhhhhhhhhccccccccc
Confidence                   48999999999999999999889999999888875432211100000000000               11123


Q ss_pred             ccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210        385 SGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ  424 (435)
Q Consensus       385 ~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~  424 (435)
                      .++.+...+.+...+++.+..+|..+..++..+....+.+
T Consensus       254 ~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~  293 (382)
T d2bkwa1         254 FATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKD  293 (382)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence            3455666667777788887666666655554444333333

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.79  E-value=2.9e-18  Score=167.52  Aligned_cols=233  Identities=11%  Similarity=0.059  Sum_probs=170.3

Q ss_pred             CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHH
Q psy10210        167 PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANY  244 (435)
Q Consensus       167 ~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~  244 (435)
                      .+..+.+.++..++++.+++++|.++...+++|+|||++++.++.++..+++.        +++....+.+.  ...++.
T Consensus        42 ~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~--------vl~~~~g~~~~~~~~~~~~  113 (388)
T d2ch1a1          42 SNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDR--------VLIAVNGIWAERAVEMSER  113 (388)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhcccccc--------ccccccccccccchhhhhh
Confidence            34578899999999999999999977666788899999999999999766665        88887777774  355667


Q ss_pred             cCCEEEEEecCCCccccHHHHHHHh-hcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210        245 FGMKVKHIRLTSSYTVDLAALQSAI-TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       245 ~g~~v~~vp~~~~~~~d~~~l~~~i-~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g  323 (435)
                      .+...+.++.++....+.+..++++ ..+++++++++.+|.+|...++++|.++|+++|+++++|++++.+..       
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss~g~~-------  186 (388)
T d2ch1a1         114 YGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGV-------  186 (388)
T ss_dssp             TTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-------
T ss_pred             hcccccccccccccccchhhhhhhhccCCcceeeeeecccccccccchhhhcchhccccceeeeeeeeccccc-------
Confidence            7888888887766667777766665 46899999999999999999999999999999999999999865433       


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC-------------CCCCCCCCccccCCCc
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW-------------PGGNYGSPSVSGSRSG  390 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~-------------~gg~~~~~~~~gsr~~  390 (435)
                          ++|+...++|+++++.||++++|.|+|+++.+++.+..... ....+             ...........++...
T Consensus       187 ----pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~  261 (388)
T d2ch1a1         187 ----PFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRN-RRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVAS  261 (388)
T ss_dssp             ----CCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHT-CSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCH
T ss_pred             ----ccchhccCceEEEEccccccCCCCeEEEEeccHHHHHhhhc-ccCccccccccchhhhhhhcccccccccCccchH
Confidence                78999999999999999999999999997776543321100 00000             0010111222334444


Q ss_pred             hHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy10210        391 GIIATCWAAMMYFGFEAQVWICVRYHFNY  419 (435)
Q Consensus       391 ~~ia~~~a~l~~~g~~g~~~~~~~~~~~~  419 (435)
                      ..+.++..+++.+..++..+..++.....
T Consensus       262 ~~i~~~~~~l~~~~~~~~~~~~~~~~~~~  290 (388)
T d2ch1a1         262 NLIFALREALAQIAEEGLENQIKRRIECA  290 (388)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            45556666777666666555555544443

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.79  E-value=3.7e-18  Score=165.88  Aligned_cols=176  Identities=13%  Similarity=0.089  Sum_probs=143.4

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHc
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYF  245 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~  245 (435)
                      +..+.+.++..++++.+++++|.+++..+++++|||+++..++..+...++.        +++....|.+  +...+...
T Consensus        44 hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  115 (377)
T d1vjoa_          44 HLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDV--------VLIGVAGYFGNRLVDMAGRY  115 (377)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCE--------EEEEESSHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhccccccc--------cceeeechhhhhhhhhhhhh
Confidence            3567888999999999999999987778899999999999999998776665        7777777776  44455666


Q ss_pred             CCEEEEEecCCCccccHHHHH-HHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQ-SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~-~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +.....+....+...+.+..+ ...++++.++++++.+|.||.+.|+++|.++|+++|+++++|++++.+.         
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~~g~---------  186 (377)
T d1vjoa_         116 GADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGG---------  186 (377)
T ss_dssp             TCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTT---------
T ss_pred             cccccccccCCCCcccchhhhhhhhcCcceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchhhhh---------
Confidence            777777766544444554444 4456689999999999999999999999999999999999999985433         


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~  362 (435)
                        .++++...++|+++++.||++++|.|+|+++.+++.
T Consensus       187 --~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~  222 (377)
T d1vjoa_         187 --VPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRA  222 (377)
T ss_dssp             --SCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHH
T ss_pred             --hhhcccccccceeeecccccccCCCEEEEecchhhH
Confidence              378888999999999999998899999996666543

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.78  E-value=4.7e-18  Score=165.32  Aligned_cols=183  Identities=19%  Similarity=0.205  Sum_probs=139.9

Q ss_pred             HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCe
Q psy10210        149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPE  227 (435)
Q Consensus       149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~  227 (435)
                      .+++.+++....++      ..|.+.++|    +.+++++|..   .+++|++||.|+.+++.++ ..++++        
T Consensus        15 ~~~~~~~~~~~~~~------~G~~v~~~E----~~la~~~g~~---~ai~~~sgt~Al~~al~al~~~~gde--------   73 (376)
T d1mdoa_          15 LAAVKTVLDSGWIT------TGPKNQELE----AAFCRLTGNQ---YAVAVSSATAGMHIALMALGIGEGDE--------   73 (376)
T ss_dssp             HHHHHHHHHHTCCS------SSHHHHHHH----HHHHHHHCCS---EEEEESCHHHHHHHHHHHTTCCTTCE--------
T ss_pred             HHHHHHHHhcCCCc------CCHHHHHHH----HHHHHHHCcC---eEEEeCCHHHHHHHHHHHhCCCCCCE--------
Confidence            34555555543222      134555544    5678888774   5688889999999999987 445554        


Q ss_pred             EEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210        228 IVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH  306 (435)
Q Consensus       228 viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li  306 (435)
                      |++++.+|.+...++...|.+++.++++ +++.+|+++++++++++|++|++++   ..|...++++|.++|++||+++|
T Consensus        74 Vi~~~~~~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~~~~~~i~~i~~~~~i~vI  150 (376)
T d1mdoa_          74 VITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH---YAGAPADLDAIYALGERYGIPVI  150 (376)
T ss_dssp             EEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHHTCCBC
T ss_pred             EEEecccccccccchhccccceeeecccccccCCCHHHHHHhcCCCCeEEEEeC---CCCCccchhHHHHHHHhcCceEE
Confidence            9999999999999999999999999998 5788999999999999999999765   58999999999999999999999


Q ss_pred             EeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210        307 VDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH  365 (435)
Q Consensus       307 vD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~  365 (435)
                      +|+|++-+...-         .......|...+++..+|.+.++.| |+++++++++.+
T Consensus       151 eD~a~a~g~~~~---------~~~~g~~g~~~~Sf~~~K~l~~g~G-G~i~t~~~~l~~  199 (376)
T d1mdoa_         151 EDAAHATGTSYK---------GRHIGARGTAIFSFHAIKNITCAEG-GIVVTDNPQFAD  199 (376)
T ss_dssp             EECTTCTTCEET---------TEETTSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHH
T ss_pred             eccchhccCeeC---------CeecccccCccccCCCcCCCCCCCC-CEEEEechhHHH
Confidence            999997553311         1112223556778889999655444 787888876644

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.77  E-value=1.1e-17  Score=161.59  Aligned_cols=159  Identities=16%  Similarity=0.099  Sum_probs=117.6

Q ss_pred             hCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHH
Q psy10210        188 FNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQ  266 (435)
Q Consensus       188 ~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~  266 (435)
                      +|.++ +++++|+|+++++.+++.++.  +        +.+++..|.|..+.......+++++.+|++ +++....+++.
T Consensus        70 ~~v~~-~~I~~~~g~~~~~~~~~~~~~--~--------~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  138 (355)
T d1lc5a_          70 HQVPA-SWILAGNGETESIFTVASGLK--P--------RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAIL  138 (355)
T ss_dssp             HTSCG-GGEEEESSHHHHHHHHHHHHC--C--------SEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHH
T ss_pred             hCCCH-HHEEecccHHHHHHHHHhhhc--c--------ccccccCCccceeccccccccccceeeeeeccCCccceeeee
Confidence            33444 389999999999888776542  2        237778899999999999999999999987 33333346677


Q ss_pred             HHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecC
Q psy10210        267 SAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDT  343 (435)
Q Consensus       267 ~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~  343 (435)
                      +++.++++++++++||||||.+   +++++|+++|++|++++++|++|..|...     +... .......+-.++..|+
T Consensus       139 ~~~~~~~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~-----~~~~-~~~~~~~~~~i~~~S~  212 (355)
T d1lc5a_         139 EALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH-----ETGF-IPALKDNPHIWVLRSL  212 (355)
T ss_dssp             HHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT-----CCCS-GGGCTTCTTEEEEEES
T ss_pred             eccccccceeeeecccCcccccchhhhhhhhhhhccccccccccccceeeeeee-----cccc-cccccccccceeeccc
Confidence            7888899999999999999998   56889999999999999999999887542     1110 1112223346777889


Q ss_pred             CCCC-CccCCcEEEEEeCCcc
Q psy10210        344 HKYG-FTPKGSSVVLYRDLKY  363 (435)
Q Consensus       344 hK~~-~~p~g~g~il~~~~~~  363 (435)
                      +|.. .++..+|+++..++.+
T Consensus       213 SK~~~l~GlR~G~~i~~~~~~  233 (355)
T d1lc5a_         213 TKFYAIPGLRLGYLVNSDDAA  233 (355)
T ss_dssp             TTTTTCTTTCCEEEECCCHHH
T ss_pred             ccccccccccccceeccchhh
Confidence            9973 3456789977665544

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.77  E-value=8.8e-19  Score=172.40  Aligned_cols=208  Identities=11%  Similarity=0.058  Sum_probs=144.3

Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC
Q psy10210        114 RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE  193 (435)
Q Consensus       114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~  193 (435)
                      .+.|.+...+....+.      ..+|.+..|.+++|+++++.+.......                          .+++
T Consensus        48 ~~~V~~a~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~~~~--------------------------~~~~   95 (401)
T d7aata_          48 LNCVRKAEAMIAAKKM------DKEYLPIAGLADFTRASAELALGENSEA--------------------------FKSG   95 (401)
T ss_dssp             CHHHHHHHHHHHHTTC------CCCCCCTTCCHHHHHHHHHHHHCTTCHH--------------------------HHTT
T ss_pred             CHHHHHHHHHHhhCCC------CCCCCCCCCCHHHHHHHHHHHhccCCcc--------------------------cCcC
Confidence            3566666666665432      2357788899999999999987642210                          0122


Q ss_pred             CceEEcCC-----hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHH
Q psy10210        194 TCGCMTSG-----GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQ  266 (435)
Q Consensus       194 ~~~~~t~g-----gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~  266 (435)
                       .++.+.+     +..++.++++++.++||.        |++++|+|+.+...++..|++++.+|+.  .++..|++.+.
T Consensus        96 -~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~--------Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  166 (401)
T d7aata_          96 -RYVTVQGISGTGSLRVGANFLQRFFKFSRD--------VYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAM  166 (401)
T ss_dssp             -CEEEEEEEHHHHHHHHHHHHHHHHCTTCCE--------EEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHH
T ss_pred             -ceEEeccchHHHHHHHHHHhhHhhcCCCce--------EEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHH
Confidence             4444332     235677778888888887        9999999999999999999999999985  56778898888


Q ss_pred             HHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210        267 SAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS  340 (435)
Q Consensus       267 ~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~  340 (435)
                      +.+.   ++++++++++||||||.+   +.+++|+++|++|++++++|++|.++.+.-.................+.++.
T Consensus       167 ~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (401)
T d7aata_         167 EDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQ  246 (401)
T ss_dssp             HHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEE
T ss_pred             HHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeE
Confidence            8774   578999999999999999   7899999999999999999999998865200000000000000111223333


Q ss_pred             ecCCCCCCccCCcEEEEEeCCc
Q psy10210        341 VDTHKYGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       341 ~s~hK~~~~p~g~g~il~~~~~  362 (435)
                      ..+.|++.....+|++....+.
T Consensus       247 s~sk~~~~~G~RiG~~~~~~~~  268 (401)
T d7aata_         247 SYAKNMGLYGERAGAFTVICRD  268 (401)
T ss_dssp             ECTTTSCCGGGCEEEEEEECSS
T ss_pred             eccccceeeccccceeecchHH
Confidence            3344455555778997776653

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=3.4e-18  Score=165.23  Aligned_cols=170  Identities=15%  Similarity=0.144  Sum_probs=130.1

Q ss_pred             HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210        179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY  258 (435)
Q Consensus       179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~  258 (435)
                      ++++.+++.+|.+++ +|++|+|+++++.++++++.++++.       .|+++.|+|..+...++..|.+++.+|.++++
T Consensus        60 ~Lr~~ia~~~gv~pe-~I~it~Gs~eai~~~~~~~~~pgd~-------~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~  131 (354)
T d1fg7a_          60 AVIENYAQYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKD-------AILYCPPTYGMYSVSAETIGVECRTVPTLDNW  131 (354)
T ss_dssp             HHHHHHHHHHTSCGG-GEEEESHHHHHHHHHHHHHCCTTTC-------EEEECSSSCTHHHHHHHHHTCEEEECCCCTTS
T ss_pred             HHHHHHHHHhCCChH-HeeeccCchHHHHHHHHHhhccccc-------cccccccccccchhhhhccCceeecccccccc
Confidence            566677777777765 9999999999999999999888874       38889999999999999999999999998889


Q ss_pred             cccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210        259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG  335 (435)
Q Consensus       259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g  335 (435)
                      .+|+++++.++ +++++|++++||||||.+-+   ++.+.+.+ +++..+++|++|..|....    .   .+.......
T Consensus       132 ~~d~~~l~~~~-~~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~-~~~~~~iidd~~~~f~~~~----~---~~~~~~~~~  202 (354)
T d1fg7a_         132 QLDLQGISDKL-DGVKVVYVCSPNNPTGQLINPQDFRTLLELT-RGKAIVVADEAYIEFCPQA----S---LAGWLAEYP  202 (354)
T ss_dssp             CCCHHHHHTSC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHH-TTTCEEEEECTTGGGSGGG----C---SGGGTTTCT
T ss_pred             ccchhhhhhcc-cccceeeccCCCccceeEeeecccccccccc-cccccccccccchhhcccc----c---cchhhcccc
Confidence            99999998877 47999999999999999944   44444444 4678899999988775421    0   011112223


Q ss_pred             ccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210        336 VTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       336 vd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~  366 (435)
                      -.++..|++|.. .++..+|+++ .++++.+.
T Consensus       203 ~~iv~~S~SK~~~laGlRiGy~i-~~~~~i~~  233 (354)
T d1fg7a_         203 HLAILRTLSKAFALAGLRCGFTL-ANEEVINL  233 (354)
T ss_dssp             TEEEEEESSSTTCCGGGCCEEEE-ECHHHHHH
T ss_pred             cceEEeCCccccCCCcccccccc-ccchhhhh
Confidence            355667899974 3557789955 55665544

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.76  E-value=1.4e-18  Score=168.91  Aligned_cols=167  Identities=11%  Similarity=0.113  Sum_probs=126.7

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEe-CCCchhHHHHHHHcCCEEEEEec
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLP-TTAHPAFDKAANYFGMKVKHIRL  254 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~-~~~~~~~~~~~~~~g~~v~~vp~  254 (435)
                      ...++++..++.++..+.+++++|+||++|+..++.++.. ++.       .|+++ .|+|+++...++..|++++  +.
T Consensus        51 ~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a~~~~l~al~~-~~~-------vi~~~~~~~~~~~~~~~~l~g~~~v--~~  120 (366)
T d2aeua1          51 FAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILALKP-KKV-------IHYLPELPGHPSIERSCKIVNAKYF--ES  120 (366)
T ss_dssp             HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHCC-SEE-------EEECSSSSCCTHHHHHHHHTTCEEE--EE
T ss_pred             hHHHHHHHHHHHccCCCccEEEEeCCHHHHHHHHHHHhCC-CCE-------EEEecCCCcchhHHHHHHhcCCeEE--CC
Confidence            4455666667777777777899999999999999988653 333       14444 5899999999999999753  33


Q ss_pred             CCCccccHHHHHHHhhcCceEEEEeCCCCCcc-cccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210        255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYG-TMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL  333 (435)
Q Consensus       255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG-~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~  333 (435)
                      +     |+++++++++++|++|++++|+||++ .++++++|+++|++||+++++|++|+.+++...   +.  +  ....
T Consensus       121 ~-----d~e~l~~~i~~~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~---~~--~--~~~~  188 (366)
T d2aeua1         121 D-----KVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLF---NQ--P--PALK  188 (366)
T ss_dssp             S-----CHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT---TC--C--CHHH
T ss_pred             C-----CHHHHHHhcCCCceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccccccccc---cC--C--CHhh
Confidence            2     79999999999999999999988754 568999999999999999999999987765311   11  1  1123


Q ss_pred             CCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        334 PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       334 ~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      .|+|+.+.|.||++. +.+.|+++.+ +++.+.
T Consensus       189 ~~~di~~~S~sK~~~-g~~~G~i~~~-~~~i~~  219 (366)
T d2aeua1         189 LGADLVVTSTDKLME-GPRGGLLAGK-KELVDK  219 (366)
T ss_dssp             HTCSEEEEETTSSSS-SCSCEEEEEE-HHHHHH
T ss_pred             cCceEEEeccccccc-ccceeEEEec-HHHHHH
Confidence            478999999999854 4567885554 555443

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.74  E-value=4.2e-17  Score=156.22  Aligned_cols=191  Identities=14%  Similarity=0.058  Sum_probs=139.8

Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210        112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG  191 (435)
Q Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~  191 (435)
                      ..|+.+.+++.+.+..       +.++|++..|.+++++++++++....    +                         +
T Consensus        32 ~~p~~i~~~~~~~~~~-------~~~~~yp~~g~~~Lr~aia~~~~~~~----v-------------------------~   75 (334)
T d2f8ja1          32 PFPEDLVDEVFRRLNS-------DALRIYYDSPDEELIEKILSYLDTDF----L-------------------------S   75 (334)
T ss_dssp             CCCHHHHHHHHHHCCT-------TGGGSCCCSSCHHHHHHHHHHHTCSS----C-------------------------C
T ss_pred             CCCHHHHHHHHHHhhc-------chhcCCCCCCcHHHHHHHHHHhcccC----C-------------------------C
Confidence            4467888888877653       24455566789999999999886531    1                         2


Q ss_pred             CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc
Q psy10210        192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG  271 (435)
Q Consensus       192 ~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~  271 (435)
                      + ++|++|+|+++++.+++++    +++        |++++|+|+.+...++..|++++.+|+++++..+     ++..+
T Consensus        76 ~-d~I~it~G~~~~l~~l~~~----~d~--------v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~-----~~~~~  137 (334)
T d2f8ja1          76 K-NNVSVGNGADEIIYVMMLM----FDR--------SVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIP-----EVNVG  137 (334)
T ss_dssp             G-GGEEEEEHHHHHHHHHHHH----SSE--------EEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCC-----CCCCC
T ss_pred             c-ceEEecCcchhHHHHHhhh----ccc--------cccccccccccccchhccCCcccccccccccccc-----ccccc
Confidence            2 4899999999999877654    455        9999999999999999999999999998665443     22346


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-cc
Q psy10210        272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TP  350 (435)
Q Consensus       272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p  350 (435)
                      +++++++++|+||||.+-+.+++.+++ ++++++++|++|..+....        .........-.+++.|+.|... ++
T Consensus       138 ~~~~l~l~nP~NPtG~~~s~~~l~~~~-~~~~~ii~Dd~~~~~~~~~--------~~~~~~~~~~~i~~~S~SK~~~~~G  208 (334)
T d2f8ja1         138 EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGES--------YVDFLKKYENLAVIRTFSKAFSLAA  208 (334)
T ss_dssp             TTEEEEEESSCTTTCCCCCHHHHHHHH-TTTCEEEEECTTGGGTCCC--------CGGGGGTCSSEEEEEESTTTSSCTT
T ss_pred             cceEEEecccccccceeecHHHhhccc-cceeEEeecccchhhcccc--------cccccccCceEEEEecCccccchhh
Confidence            789999999999999998888887764 5789999999986653311        1111122234577778999733 44


Q ss_pred             CCcEEEEEeCCccccc
Q psy10210        351 KGSSVVLYRDLKYKHC  366 (435)
Q Consensus       351 ~g~g~il~~~~~~~~~  366 (435)
                      ..+|+++. ++++...
T Consensus       209 ~R~G~~~~-~~~~i~~  223 (334)
T d2f8ja1         209 QRVGYVVA-SEKFIDA  223 (334)
T ss_dssp             TCEEEEEE-CHHHHHH
T ss_pred             hhhhhccc-chHHHHH
Confidence            67899665 5555443

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.73  E-value=6.9e-18  Score=166.47  Aligned_cols=200  Identities=11%  Similarity=0.062  Sum_probs=132.9

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD  215 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~  215 (435)
                      ..+|.+..|.|++|+++++++.+..... +.                        .....++.|.+++.++..+..++..
T Consensus        67 ~~~Y~p~~G~p~lreaia~~~~~~~~~~-~~------------------------~~~~~~~~~~~~~~~~~~~~~~l~~  121 (412)
T d1ajsa_          67 NHEYLPILGLAEFRTCASRLALGDDSPA-LQ------------------------EKRVGGVQSLGGTGALRIGAEFLAR  121 (412)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHCTTCHH-HH------------------------TTCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhccCCcc-cc------------------------cccceeecccchhhHHHHHHHHHHH
Confidence            3467888999999999999987532110 00                        1112466778888888877766532


Q ss_pred             HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-C--CCccccHHHHHHHh---hcCceEEEEeCCCCCcccc-
Q psy10210        216 YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-T--SSYTVDLAALQSAI---TGNTVMLVGSMPNFPYGTM-  288 (435)
Q Consensus       216 ~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~--~~~~~d~~~l~~~i---~~~~~~v~~~~p~nptG~~-  288 (435)
                      .... ..-++++|++++|+|+.+...++..|++.+.++. .  ..+..|++.+++.+   .++++++++++||||||.+ 
T Consensus       122 ~~~~-~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~  200 (412)
T d1ajsa_         122 WYNG-TNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDP  200 (412)
T ss_dssp             HSSS-SSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCC
T ss_pred             Hhhh-cCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCC
Confidence            1110 0112344999999999999999999998766543 2  44567888777664   4578999999999999999 


Q ss_pred             --cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCC-CCCccCCcEEEEEeCCc
Q psy10210        289 --DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK-YGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       289 --~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK-~~~~p~g~g~il~~~~~  362 (435)
                        +.+++|+++|++||+++++|++|..+.+.-........ ..........++..++.| ++....++|+++...+.
T Consensus       201 s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~  276 (412)
T d1ajsa_         201 TPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI-RYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE  276 (412)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH-HHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSS
T ss_pred             CHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhh-hhhhhhcccccccccccccccCCCCCccccccchhH
Confidence              77999999999999999999999987652100000000 000011112344444444 54455678997777654

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=1.7e-15  Score=149.98  Aligned_cols=308  Identities=16%  Similarity=0.046  Sum_probs=205.1

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccc-cccCChHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHH
Q psy10210        104 FLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSG-AVYYYQQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVI  181 (435)
Q Consensus       104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~  181 (435)
                      ...+|.  +++.++++.+.+...++..........| +.++.+|.+.+.+.++|.   ..+|++| +.+++..++..|..
T Consensus        38 ~l~LP~--~sE~El~r~~~~la~kN~~~~~~~~~lG~~~~hy~P~v~~~~~~~~T---aYTPYQPaEiSQG~LQalfEfQ  112 (471)
T d1wyub1          38 PPRLPE--VDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARLFA---DLHPYQDPRTAQGALRLMWELG  112 (471)
T ss_dssp             CCCCCC--CCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHTTS---SCCTTSCGGGCHHHHHHHHHHH
T ss_pred             CCCCCC--CCHHHHHHHHHHHHhCCCCccccccCCccccCccCcchhhhHHHHHh---ccCCCCCHHHHHHHHHHHHHHH
Confidence            356784  8999999999999887643222222222 233357888888887643   3469997 99999999999999


Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD  261 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d  261 (435)
                      .++++++|.+-. +.-+..|+|..-..++.+.+-..+.++......++++...+..........+..++.++.+..+..|
T Consensus       113 tmi~eLTGMdva-NaS~yDGatA~aeA~~ma~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (471)
T d1wyub1         113 EYLKALTGMDAI-TLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVD  191 (471)
T ss_dssp             HHHHHHHTCSEE-ECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBC
T ss_pred             HHHHHHhCCCcc-ccccchHHHHHHHHHHHHHHHhhhcccccccccccCCcccccceeeeeecccceeeccccccccccc
Confidence            999999999754 5566677776555555444433332222233445556666666777777788899999988888899


Q ss_pred             HHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe
Q psy10210        262 LAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV  341 (435)
Q Consensus       262 ~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~  341 (435)
                      .+.+.....+++.++++.+|++.-+..++.+++.+++++.+..+++|.+--....      +    .......|.|.+++
T Consensus       192 ~~~~~~~~~~~~a~v~v~~p~~~g~~e~~~~~~~~~~h~~g~~~~~~~~~~~~~~------~----l~~p~~~g~div~v  261 (471)
T d1wyub1         192 LEALKRELGPHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIM------G----WARPGDMGFDVVHL  261 (471)
T ss_dssp             HHHHHHHCSTTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT------T----TCCHHHHTCSEEEC
T ss_pred             chhhhhhhhccccceeeccCCCcccccchhhhhHHHHHhccccccccccchhhhh------h----ccccCccccccccc
Confidence            9999999989999999999998544446799999999999998888876432221      1    11122336788888


Q ss_pred             cCCCCC-----CccCCcEEEEEeCCcccccccccc---CCCCCCC-CCCCc----cccCCCchHHHHHHHHHHHhcHHHH
Q psy10210        342 DTHKYG-----FTPKGSSVVLYRDLKYKHCQYFVT---SDWPGGN-YGSPS----VSGSRSGGIIATCWAAMMYFGFEAQ  408 (435)
Q Consensus       342 s~hK~~-----~~p~g~g~il~~~~~~~~~~~~~~---~~~~gg~-~~~~~----~~gsr~~~~ia~~~a~l~~~g~~g~  408 (435)
                      +.|+.+     +|++++|++.++++-.++---...   .++.+-. .....    -.|+-.+.....++..+..+|.+|+
T Consensus       262 g~~q~~G~P~~~GGP~~G~~a~~~~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL  341 (471)
T d1wyub1         262 NLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGL  341 (471)
T ss_dssp             CTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccceeehhhhhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhH
Confidence            888853     344567886666643332110000   0000000 00011    1133333334466677899999999


Q ss_pred             HHHHHHHHHHHHHHHHhcC
Q psy10210        409 VWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       409 ~~~~~~~~~~~~~~~~~l~  427 (435)
                      ++..+++.+++.++.++|.
T Consensus       342 ~elA~~~~~~A~Yla~~L~  360 (471)
T d1wyub1         342 KKAAALAVLNARYLKELLK  360 (471)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999888777664

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=2.9e-18  Score=168.41  Aligned_cols=192  Identities=10%  Similarity=-0.082  Sum_probs=136.1

Q ss_pred             CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHH----HHHHH
Q psy10210        135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTES----IMMAC  210 (435)
Q Consensus       135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggtea----i~~a~  210 (435)
                      +...|.+..|.|++|+++++++.+.....                          .++ ++++.+.+++.+    +.+++
T Consensus        62 ~~~~Y~p~~G~~~lR~aia~~~~~~~~~~--------------------------~~~-~~i~~~~~~~~~~~~~l~~~~  114 (397)
T d3tata_          62 GASLYLPMEGLNCYRHAIAPLLFGADHPV--------------------------LKQ-QRVATIQTLGGSGALKVGADF  114 (397)
T ss_dssp             SSBCCCCTTCCHHHHHHHHHHHTCSSCHH--------------------------HHT-TCEEECCBSHHHHHHHHHHHH
T ss_pred             cCCCCCCcccCHHHHHHHHHHHhhccCCc--------------------------CCc-CcEEEecCchhHHHHHHHHHH
Confidence            35568888999999999999987642210                          012 256666655543    55555


Q ss_pred             HHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210        211 KAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAIT---GNTVMLVGSMPNFPY  285 (435)
Q Consensus       211 ~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt  285 (435)
                      .++.++++.        |++++|+|+.+...++..|.+++.+|++  .++..|.+++.+.+.   ++++++++++|||||
T Consensus       115 ~~~~~pgd~--------Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPT  186 (397)
T d3tata_         115 LKRYFPESG--------VWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPT  186 (397)
T ss_dssp             HHHHCSSCC--------CEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHHHHHHTTCCSSCCCEECSSSCSSS
T ss_pred             hhhcCCCCc--------ceecccCccccHHHHHHcCCEEEEEecchhhccccchHHHHHHhhhcccccEEEEecCCCCCC
Confidence            556666776        9999999999999999999999999986  445678887777654   467899999999999


Q ss_pred             ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210        286 GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL  361 (435)
Q Consensus       286 G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~  361 (435)
                      |.+   +.+++|+++|++|++++++|++|.++.+.......  ..........-.++..|+.|. +.....+|+++....
T Consensus       187 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~--~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~  264 (397)
T d3tata_         187 GADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAY--AIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCE  264 (397)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHH--HHHHHHTTTCCCEECBCCHHHHTBTTTCCBCCEEECS
T ss_pred             CeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccch--hhhhhhhcCCceEEEecCcccccccCccccccccchh
Confidence            999   78999999999999999999999987652100000  000001111124556678885 333466899777765


Q ss_pred             cc
Q psy10210        362 KY  363 (435)
Q Consensus       362 ~~  363 (435)
                      ..
T Consensus       265 ~~  266 (397)
T d3tata_         265 DA  266 (397)
T ss_dssp             ST
T ss_pred             HH
Confidence            43

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=3.9e-17  Score=157.27  Aligned_cols=216  Identities=13%  Similarity=0.030  Sum_probs=158.9

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHc
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYF  245 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~  245 (435)
                      +..+.+.++..++++.++++++.+.+ .+++++|||+++.+++..+..++++        +++....+.+  +...++..
T Consensus        26 hr~~~f~~i~~~~~~~l~~ll~~~~~-~i~~~gsgT~a~e~~~~nl~~~g~~--------vlv~~~G~f~~~~~~~a~~~   96 (348)
T d1iuga_          26 HRTEAAREVFLKARGLLREAFRTEGE-VLILTGSGTLAMEALVKNLFAPGER--------VLVPVYGKFSERFYEIALEA   96 (348)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHTCSSE-EEEEESCHHHHHHHHHHHHCCTTCE--------EEEEECSHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCCC-EEEEeCchHHHHHHHHHhccccccc--------ceeecchHHHHHHHHHHHhc
Confidence            34678889999999999999997654 7999999999999999998776665        8777777666  66777888


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC--CcEEEeccccchhhhcccccC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG--IPVHVDCCLGGFLAPFMSAAG  323 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~--~~livD~~~~~~~~~~~~~~g  323 (435)
                      |.++..+..+....+++++   ..+.+++.+++++..+.+|.+.++++|.++|++|+  .++++|++++.+..       
T Consensus        97 ~~~~~~~~~~~g~~~~~~~---~~~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavss~g~~-------  166 (348)
T d1iuga_          97 GLVVERLDYPYGDTPRPED---VAKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVG-------  166 (348)
T ss_dssp             TCEEEEEECCTTCCCCTTT---SCCSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTB-------
T ss_pred             CcccccccccCCCcccccc---ccccCCCeeEEEecchhhhhhccHHHHHHHHHhhhccceeechhhhccccc-------
Confidence            9888888876443444433   23567889999999999999999999999999985  78899999764433       


Q ss_pred             CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccc-cccCCCC--CCCCCCCccccCCCchHHHHHHHHH
Q psy10210        324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQY-FVTSDWP--GGNYGSPSVSGSRSGGIIATCWAAM  400 (435)
Q Consensus       324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~-~~~~~~~--gg~~~~~~~~gsr~~~~ia~~~a~l  400 (435)
                          ++++...++|++++++||++.+|+|+|+++++++.+.+... ....+|.  ...+.......+.+...+.+...++
T Consensus       167 ----~i~~d~~~iD~~~~~sqK~l~gppG~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~~l~~aL  242 (348)
T d1iuga_         167 ----EVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVL  242 (348)
T ss_dssp             ----CCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHH
T ss_pred             ----ccccccccCCEEEeccccceecCCceeeeeechHHHhhhcccccccchhhhhhhhccCcccccccchHHHHHHHHH
Confidence                78888889999999999998899999998888764432210 0000100  0001112223455666676777777


Q ss_pred             HHhcHH
Q psy10210        401 MYFGFE  406 (435)
Q Consensus       401 ~~~g~~  406 (435)
                      +.+..+
T Consensus       243 ~~~~~~  248 (348)
T d1iuga_         243 EEVLPR  248 (348)
T ss_dssp             HHHGGG
T ss_pred             HHHHHH
Confidence            765433

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.72  E-value=6.8e-17  Score=161.61  Aligned_cols=177  Identities=12%  Similarity=-0.019  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CCEEEEE--
Q psy10210        176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GMKVKHI--  252 (435)
Q Consensus       176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~~v~~v--  252 (435)
                      ...+.++.+|+++|++.  .+++++|+|.++..++.+++++++.        ||++..+|.+....+... +..++.+  
T Consensus        67 ~i~eae~~~A~~~ga~~--a~f~~~Gtt~~n~a~i~a~~~~gd~--------Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~  136 (462)
T d1c4ka2          67 PAVAAEKHAARVYNADK--TYFVLGGSSNANNTVTSALVSNGDL--------VLFDRNNHKSVYNSALAMAGGRPVYLQT  136 (462)
T ss_dssp             HHHHHHHHHHHHTTCSE--EEEESSHHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred             HHHHHHHHHHHHhCCCe--EEEECCchHHHHHHHHHHhcCCCCe--------EEecccchHHHHHHHHHHhcCCceeeec
Confidence            45667789999999852  3444555566677778778877776        999999999998877665 4444443  


Q ss_pred             ecCCCc--------cccHHH---------HHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210        253 RLTSSY--------TVDLAA---------LQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL  315 (435)
Q Consensus       253 p~~~~~--------~~d~~~---------l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~  315 (435)
                      ++++.+        .++.+.         +++++..++..+++.+.+|..|.+.|+++|+++|++||+++|+|+|++...
T Consensus       137 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~  216 (462)
T d1c4ka2         137 NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE  216 (462)
T ss_dssp             EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred             ccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhccc
Confidence            444333        223333         333444566666666666779999999999999999999999999998775


Q ss_pred             hhcccc---cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        316 APFMSA---AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       316 ~~~~~~---~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                      ......   ..... .-.....++|++++|+||++.++.|++++..++..+
T Consensus       217 ~~~~~~~~~~~~~g-~~~~~~~~~D~~~~S~HK~lg~~~~g~ll~~~~~~~  266 (462)
T d1c4ka2         217 QFIPMMRNSSPLLI-DDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI  266 (462)
T ss_dssp             GSSGGGGGGCTTSC-CCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG
T ss_pred             cccCcCCcchhhcc-ccccccCCccEEEEecCcccccccceEEEEeccccc
Confidence            532111   10000 001123467999999999976666666655555433

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.7e-16  Score=153.20  Aligned_cols=258  Identities=10%  Similarity=-0.034  Sum_probs=174.4

Q ss_pred             cccccCC---hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        138 SGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       138 ~~~~~~g---~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      +.+.|-|   +|++++++.+.+.++... ...+....+..++..++.+.+|+++|.+   ..+++++|+.|+..++.++.
T Consensus        44 ~s~dYLGl~~~p~v~~a~~~a~~~~G~~-~~~sr~~~g~~~~~~~lE~~LA~~~g~e---~al~~~SG~~an~~~i~al~  119 (383)
T d1bs0a_          44 SSNDYLGLSHHPQIIRAWQQGAEQFGIG-SGGSGHVSGYSVVHQALEEELAEWLGYS---RALLFISGFAANQAVIAAMM  119 (383)
T ss_dssp             SCCCTTSGGGCHHHHHHHHHHHHHHCSC-CCSBTTTTCCCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHC
T ss_pred             EcccccccCCCHHHHHHHHHHHHHhCCC-CCccccccCcchHHHHHHHHHHHhcCCC---ceEEecccchhhHHHHHhhc
Confidence            3334444   899999999999987543 3334445566677777888899999874   56888899999999999998


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCcccccCH
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTMDDI  291 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~i  291 (435)
                      .+++.        |++....|.++...++..+.+++.++.     .|++++++.+.   +++.+|+++.+.+++|.+.|+
T Consensus       120 ~~~d~--------v~~d~~~h~si~~g~~~~~~~~~~~~h-----nd~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~pl  186 (383)
T d1bs0a_         120 AKEDR--------IAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPL  186 (383)
T ss_dssp             CTTCE--------EEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCH
T ss_pred             CCCce--------EEeeccccHHHhhccccCCCcceEecc-----hHHHHHHHHhcccCCCceEEEecCCCCCCCcccch
Confidence            77776        999999999999999999999988874     47788887775   356899999999999999999


Q ss_pred             HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccccc
Q psy10210        292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVT  371 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~  371 (435)
                      ++|.++|++||+++++|++|+.+++.   ..|.+.  .+......+++..++.|.+ +..| |+ +..+.+..+......
T Consensus       187 ~~l~~l~~~~~~~livDeah~~gv~G---~~g~G~--~~~~~~~~~~~~~t~~ka~-g~~G-g~-v~~~~~~~~~l~~~~  258 (383)
T d1bs0a_         187 AEIQQVTQQHNGWLMVDDAHGTGVIG---EQGRGS--CWLQKVKPELLVVTFGKGF-GVSG-AA-VLCSSTVADYLLQFA  258 (383)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSS---GGGCCH--HHHTTCCCSEEEEESSSTT-SSCC-EE-EEECHHHHHHHHHHC
T ss_pred             hHHHHHHHhcCcEEEeecceeeeecC---Ccccch--HHHcCCccccccccccccc-cccc-cc-cccchhHHHHHHhhc
Confidence            99999999999999999999988773   223221  1111223466777777874 4443 44 444444443322222


Q ss_pred             CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        372 SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       372 ~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      ..+..        ..+.+...++++.+++..+......++.++..+......+.+.+
T Consensus       259 ~~~~~--------s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~  307 (383)
T d1bs0a_         259 RHLIY--------STSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQD  307 (383)
T ss_dssp             HHHHS--------SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhh--------cccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh
Confidence            22111        11222333345555555554444444444444444444444433

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.70  E-value=1.1e-16  Score=156.77  Aligned_cols=207  Identities=15%  Similarity=0.142  Sum_probs=138.6

Q ss_pred             CHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC
Q psy10210        113 NRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP  192 (435)
Q Consensus       113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~  192 (435)
                      .++.|.+.+++......      ...|.+..|.|++|+++++.+.......                           .+
T Consensus        45 ~~~~V~~A~~~~~~~~~------~~~Y~p~~G~~~lr~aia~~~~~~~~~~---------------------------~~   91 (394)
T d2ay1a_          45 IMRAVHAAEQRMLETET------TKTYAGLSGEPEFQKAMGELILGDGLKS---------------------------ET   91 (394)
T ss_dssp             CCHHHHHHHHHHHHHCC------CCCCCCSSCCHHHHHHHHHHHHGGGCCG---------------------------GG
T ss_pred             CCHHHHHHHHHHhhCCC------CCCCCCCCCCHHHHHHHHHHHhcccccc---------------------------cc
Confidence            34567777777665432      2357788899999999999987643221                           11


Q ss_pred             CCceEEcCChHHH--HHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHH
Q psy10210        193 ETCGCMTSGGTES--IMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSA  268 (435)
Q Consensus       193 ~~~~~~t~ggtea--i~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~  268 (435)
                      . ..++|+||+.+  +.+.+....++++.        |++++|+|+.+...++..|++++.+|+.  .++..+.+++++.
T Consensus        92 ~-~~~~~~~~~~~~~l~~~~~~~~~~gd~--------V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  162 (394)
T d2ay1a_          92 T-ATLATVGGTGALRQALELARMANPDLR--------VFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKAD  162 (394)
T ss_dssp             E-EEEEEEHHHHHHHHHHHHHHHHCTTCC--------EEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHH
T ss_pred             c-cceeccCchHHHHHHHHHhhhcCCceE--------EEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHHH
Confidence            1 34455555444  55555555666666        9999999999999999999999999985  4455566665554


Q ss_pred             h---hcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEec
Q psy10210        269 I---TGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD  342 (435)
Q Consensus       269 i---~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s  342 (435)
                      .   .++++++++++||||||.+   +.+++|+++|++|++++++|++|.++.+.-.....  .............+..+
T Consensus       163 ~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s  240 (394)
T d2ay1a_         163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAA--GTRLIASRIPEVLIAAS  240 (394)
T ss_dssp             HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHH--HHHHHHHHCSSEEEEEE
T ss_pred             HhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccch--hhhhhhhhccccccccc
Confidence            4   3567889999999999999   77999999999999999999999988652100000  00000001111333444


Q ss_pred             CCC-CCCccCCcEEEEEeCCcc
Q psy10210        343 THK-YGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       343 ~hK-~~~~p~g~g~il~~~~~~  363 (435)
                      +.| ++....++|++.......
T Consensus       241 ~sk~~~~~G~R~G~~~~~~~~~  262 (394)
T d2ay1a_         241 CSKNFGIYRERTGCLLALCADA  262 (394)
T ss_dssp             CTTTTTCGGGCEEEEEEECSSH
T ss_pred             ccccccCCcccccchhhchhHH
Confidence            445 444456789977776543

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.7e-17  Score=162.78  Aligned_cols=210  Identities=13%  Similarity=0.096  Sum_probs=141.8

Q ss_pred             CHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC
Q psy10210        113 NRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP  192 (435)
Q Consensus       113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~  192 (435)
                      .++.|.+...+......      ..+|.+..|.+++|+++++++.+..... .                        .+.
T Consensus        45 ~~~~V~~A~~~~~~~~~------~~~Y~p~~G~~~lR~aia~~~~~~~~~~-~------------------------~~~   93 (396)
T d2q7wa1          45 VLTSVKKAEQYLLENET------TKNYLGIDGIPEFGRCTQELLFGKGSAL-I------------------------NDK   93 (396)
T ss_dssp             CCHHHHHHHHHHHHHCC------CCCCCCTTCCHHHHHHHHHHHHCTTCHH-H------------------------HTT
T ss_pred             CCHHHHHHHHHHhhCCC------CCCCCCCcCCHHHHHHHHHHHHhhcCCc-c------------------------ccc
Confidence            34667777776665432      2357788899999999999987642210 0                        012


Q ss_pred             CCceEEcCChHHHHHHHHHHH--HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHH
Q psy10210        193 ETCGCMTSGGTESIMMACKAY--RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSA  268 (435)
Q Consensus       193 ~~~~~~t~ggteai~~a~~a~--~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~  268 (435)
                      ....+.|.|++.++.+++..+  .++++.        |++++|+|+.+...++..|++++.+|..  .++..+...+.+.
T Consensus        94 ~~~~~~~~~~~~~~~l~~~~l~~~~~gd~--------Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  165 (396)
T d2q7wa1          94 RARTAQTPGGTGALRVAADFLAKNTSVKR--------VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINS  165 (396)
T ss_dssp             CEEEEEESHHHHHHHHHHHHHHHHSCCCE--------EEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHH
T ss_pred             ceeeeccchHHHHHHHHHHHHhhcccceE--------EEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHH
Confidence            223456777776666665544  445555        9999999999999999999999999985  4455566666654


Q ss_pred             h---hcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEec
Q psy10210        269 I---TGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD  342 (435)
Q Consensus       269 i---~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s  342 (435)
                      .   .++++++++++||||||.+   +.+++|+++|++|++++++|++|.++.+.-.....  ............++..+
T Consensus       166 ~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s  243 (396)
T d2q7wa1         166 LNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAE--GLRAFAAMHKELIVASS  243 (396)
T ss_dssp             HTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTH--HHHHHHHHCSCEEEEEE
T ss_pred             HHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCch--Hhhhhhhhccccccccc
Confidence            4   3578899999999999998   77899999999999999999999988652100000  00000001112344445


Q ss_pred             CCC-CCCccCCcEEEEEeCCcc
Q psy10210        343 THK-YGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       343 ~hK-~~~~p~g~g~il~~~~~~  363 (435)
                      +.| ++.....+|++.......
T Consensus       244 ~sk~~~~~G~R~G~~~~~~~~~  265 (396)
T d2q7wa1         244 YSKNFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             CTTTTTCGGGCCEEEEEECSSH
T ss_pred             ccccccccCCCccccccchhHH
Confidence            555 444557799988776543

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.69  E-value=1.1e-15  Score=148.97  Aligned_cols=169  Identities=20%  Similarity=0.266  Sum_probs=132.3

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV  249 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v  249 (435)
                      |.+.++|    +.+++++|..   .++.+++||.|+.++++++ .++++        +|++|+.+|.+...++...|+++
T Consensus        34 ~~v~~fE----~~~a~~~g~~---~~v~~~SGt~Al~lal~~l~~~~gd--------eVi~p~~t~~a~~~ai~~~g~~p   98 (384)
T d1b9ha_          34 DEVNSFE----REFAAHHGAA---HALAVTNGTHALELALQVMGVGPGT--------EVIVPAFTFISSSQAAQRLGAVT   98 (384)
T ss_dssp             SHHHHHH----HHHHHHTTCS---EEEEESCHHHHHHHHHHHTTCCTTC--------EEEEESSSCTHHHHHHHHTTCEE
T ss_pred             HHHHHHH----HHHHHHHCcC---eEEEeCCHHHHHHHHHHHcCCCCCC--------EEEEecccccccccccccccccc
Confidence            4455555    4667777775   5689999999999999986 34444        49999999999999999999999


Q ss_pred             EEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210        250 KHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP  328 (435)
Q Consensus       250 ~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~  328 (435)
                      +.++++ .++.+|++.+++.++++|++|++   .+..|...++++|.++|+++++++|+|+|++-+.....+..|     
T Consensus        99 ~~~d~~~~~~~~d~~~~~~~i~~~tk~i~~---~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ga~~~g~~~g-----  170 (384)
T d1b9ha_          99 VPVDVDAATYNLDPEAVAAAVTPRTKVIMP---VHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVG-----  170 (384)
T ss_dssp             EEECBCTTTCCBCHHHHHHHCCTTEEEECC---BCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGG-----
T ss_pred             ccccccccccccchhhhccccccccccccc---ccccccccccccchhhhhhhhhhhhhhhceecccccCCEecC-----
Confidence            999988 67889999999999999999874   455888999999999999999999999999765532111111     


Q ss_pred             CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                         ....+.+++++.+|...++.| |+++++++++.+.
T Consensus       171 ---~~g~~~~~Sf~~~K~i~~g~G-G~i~t~~~~~~~~  204 (384)
T d1b9ha_         171 ---ELDSIATFSFQNGKLMTAGEG-GAVVFPDGETEKY  204 (384)
T ss_dssp             ---GSSSCEEEECCTTSSSCSSSC-EEEEECTTCHHHH
T ss_pred             ---cccccceeccccccccccccc-chhhhhhHHHHHH
Confidence               112257788889998655444 7778888877543

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.4e-16  Score=156.22  Aligned_cols=253  Identities=11%  Similarity=0.003  Sum_probs=172.9

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      .+|++++++.+.+.++... +..+....+..+...++.+.+++++|.+   .++++++|++|+..++.++..+++.    
T Consensus        60 ~hp~v~~a~~~a~~~~g~~-~~~sr~~~g~~~~~~~lE~~lA~~~g~e---~al~~~SG~~An~~~i~~l~~~~d~----  131 (401)
T d1fc4a_          60 NHPDLIAAAKAGMDSHGFG-MASVRFICGTQDSHKELEQKLAAFLGME---DAILYSSCFDANGGLFETLLGAEDA----  131 (401)
T ss_dssp             TCHHHHHHHHHHHHHHCSC-CCSCHHHHCCBHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHTTHHHHCCTTCE----
T ss_pred             CCHHHHHHHHHHHHHhCCC-cccceeeccCcHHHHHHHHHHHHhhcCC---ceEEecchhhhhHHHHHHhcCCCcE----
Confidence            3899999999999886432 2222223334566677788889999874   5799999999999999998876665    


Q ss_pred             CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHh---h---cCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210        224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAI---T---GNTVMLVGSMPNFPYGTMDDIGAIAKL  297 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i---~---~~~~~v~~~~p~nptG~~~~i~~i~~l  297 (435)
                          |++....|.+....+...++++..++..     |.+++++.+   +   ..+.+|++....+..|.+.+++++.++
T Consensus       132 ----i~~d~~~h~s~~~G~~~~~a~~~~~~~~-----d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L  202 (401)
T d1fc4a_         132 ----IISDALNHASIIDGVRLCKAKRYRYANN-----DMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDL  202 (401)
T ss_dssp             ----EEEETTCCHHHHHHHHTSCSEEEEECTT-----CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHH
T ss_pred             ----EEeCCcchHHHHccccccCceEEEEcCC-----ChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhhhhHHHHH
Confidence                9999999999999999999998888743     455555443   3   245688888888889999999999999


Q ss_pred             HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210        298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG  377 (435)
Q Consensus       298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg  377 (435)
                      |++||+.+++||+++.+++.   ..|.+....-.....+|+++.++.|.+.++.| |+ +..++++.+......+.+..+
T Consensus       203 ~~~~~a~LivDeah~~g~~g---~~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~G-g~-v~g~~~~~~~l~~~~~~~~~s  277 (401)
T d1fc4a_         203 ADKYDALVMVDDSHAVGFVG---ENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GY-TAARKEVVEWLRQRSRPYLFS  277 (401)
T ss_dssp             HHHTTEEEEEECTTTTTTSS---TTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EE-EEECHHHHHHHHHHCHHHHHS
T ss_pred             HhhcCcEEEehhhhcccccc---CCCCccchhccCCCCCeEEEeecccccccCCc-cc-ccCCHHHHHHHHcCChhhhhc
Confidence            99999999999999988772   22332111111234589999999999644443 55 666666654322222221111


Q ss_pred             CCCCCccccCCCchHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        378 NYGSPSVSGSRSGGIIATCWAAMMYF-GFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       378 ~~~~~~~~gsr~~~~ia~~~a~l~~~-g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                              .+-+....+++.++++.+ ..+...+++++..+++++.+...
T Consensus       278 --------~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~  319 (401)
T d1fc4a_         278 --------NSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA  319 (401)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --------CCCCHHHHHHHHhhhcccccCHHHHHHHHHHHHHHHhhhccc
Confidence                    122223333444455543 33556677777777777776654

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.68  E-value=6.6e-16  Score=150.54  Aligned_cols=246  Identities=15%  Similarity=0.074  Sum_probs=169.1

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++.+++.+.....    ..+  ..+.+.++.+.+........ ..+.++++|+||+..|++.++....     
T Consensus        54 ~hp~v~~a~~~~~~~~~~~~----~~~--~~~~~~~la~~l~~~~~~~~-~~v~f~~sGseA~e~Aik~Ar~~t~-----  121 (387)
T d1vefa1          54 GNPEVVEAVKRQAETLMAMP----QTL--PTPMRGEFYRTLTAILPPEL-NRVFPVNSGTEANEAALKFARAHTG-----  121 (387)
T ss_dssp             TCHHHHHHHHHHHHHCCCCC----TTS--CCHHHHHHHHHHHHTSCTTE-EEEEEESSHHHHHHHHHHHHHHHHS-----
T ss_pred             CcHHHHHHHHHHHHhhcccc----ccc--CCchHHHHHHHhhhhccccc-eeeccccCchHHHHHHHHHHHhhcc-----
Confidence            48999999999988743221    111  13445555555666553322 4789999999999999999987653     


Q ss_pred             CCCeEEEeCCCchhHHHHHHH-cC------------CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210        224 SLPEIVLPTTAHPAFDKAANY-FG------------MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM--  288 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~~~-~g------------~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~--  288 (435)
                       +..|+....+|++....+.. .|            ..+..+|.     -|++.+++.+.+++.+|++.......|.+  
T Consensus       122 -r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~~~iAavi~EPi~g~~G~~~~  195 (387)
T d1vefa1         122 -RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEETAAVILEPVQGEGGVRPA  195 (387)
T ss_dssp             -CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETTTTSEEC
T ss_pred             -cceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-----CCHHHHHHhcCCCeEEEEEECCCCCCCCccC
Confidence             34688888877774333332 22            13445553     37899999999999999998776666776  


Q ss_pred             --cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        289 --DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       289 --~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                        +.+++|.++|++||+++|.||++.||..     .|.   .+.+...|  .|+++++  |.+.+....+.++.+++...
T Consensus       196 ~~~~l~~l~~lc~~~g~llI~DEV~tGfgR-----~G~---~~~~~~~~v~PDi~~~g--K~l~gG~~~~~~~~~~~~~~  265 (387)
T d1vefa1         196 TPEFLRAAREITQEKGALLILDEIQTGMGR-----TGK---RFAFEHFGIVPDILTLA--KALGGGVPLGVAVMREEVAR  265 (387)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTTTT-----TSS---SSTHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEHHHHH
T ss_pred             CHHHHHHHHHHHHHcCceEEecccccccCc-----cCC---CcccccCCcCCceeeec--ccCCCCccccccccceeeee
Confidence              4499999999999999999999998733     122   23332223  4888888  76555555677666654432


Q ss_pred             cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .    ..+...+++|...++       +.+++.++++.+.++.+.+++++..+.+++.++.+..
T Consensus       266 ~----~~~~~~g~T~~gnPl-------a~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~  318 (387)
T d1vefa1         266 S----MPKGGHGTTFGGNPL-------AMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS  318 (387)
T ss_dssp             T----SCTTSSCCSSTTCHH-------HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC
T ss_pred             c----cccCCccccCCCCcc-------hhhhcccchhhcccccccchHhhhhHHHHHHHHhcCC
Confidence            2    134445554433333       3478889999999999999999999999988887643

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.67  E-value=1.5e-15  Score=147.31  Aligned_cols=251  Identities=12%  Similarity=0.025  Sum_probs=163.6

Q ss_pred             HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeE
Q psy10210        149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEI  228 (435)
Q Consensus       149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~v  228 (435)
                      .+++.+.+....++      ..|.+.++|.    .+++++|..   .++.+++||.|+.++++++....     .++++|
T Consensus        15 ~~~v~~~l~~~~~~------~G~~v~~fE~----~~~~~~g~k---~ai~~~Sgt~Al~~al~al~~~~-----~~~~eV   76 (371)
T d2fnua1          15 KKAVLEVLNSKQLT------QGKRSLLFEE----ALCEFLGVK---HALVFNSATSALLTLYRNFSEFS-----ADRNEI   76 (371)
T ss_dssp             HHHHHHHHTSSCCS------SSHHHHHHHH----HHHHHHTCS---EEEEESCHHHHHHHHHHHSSCCC-----TTSCEE
T ss_pred             HHHHHHHHcCCCcc------CCHHHHHHHH----HHHHHHCcC---eEEEEecHHHHHHHHHHHhcccC-----CCCCee
Confidence            44555655442221      2445555554    677778775   56899999999999999864221     124579


Q ss_pred             EEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEe
Q psy10210        229 VLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVD  308 (435)
Q Consensus       229 iv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD  308 (435)
                      ++|..+|++...++...|++++.++++++..++.+++++.++++|++|++++.   .|...++++|.++|+++|+++|+|
T Consensus        77 i~p~~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh~---~G~~~~~~~i~~~~~~~~i~lIED  153 (371)
T d2fnua1          77 ITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSD  153 (371)
T ss_dssp             EECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEE
T ss_pred             ecccccccccceeeeccCcccccccccccccccchhhhhhccchhhccccccc---cccccccccccccccccchhhccc
Confidence            99999999999999999999999999977777888899999999999997764   799999999999999999999999


Q ss_pred             ccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCC----CCCCCCCCCcc
Q psy10210        309 CCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSD----WPGGNYGSPSV  384 (435)
Q Consensus       309 ~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~----~~gg~~~~~~~  384 (435)
                      +|++-+...-.+..|        ....+.++++...|.+.+. +.|+++++++++.+........    +....+....+
T Consensus       154 aaqa~Ga~~~~~~~G--------~~g~~~~~Sf~~~K~l~~g-~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  224 (371)
T d2fnua1         154 SSHALGSEYQNKKVG--------GFALASVFSFHAIKPITTA-EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSI  224 (371)
T ss_dssp             CTTCTTCEETTEETT--------SSSSEEEEECCTTSSSCCS-SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSC
T ss_pred             hhhccCceeccccCC--------ccccccccccccccccccc-cceEEEeechhhhhhcccccccccccccccccccccc
Confidence            999866542211111        1122567788889986544 4588788887664432111100    00000000001


Q ss_pred             c-cCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210        385 S-GSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLW  430 (435)
Q Consensus       385 ~-gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~  430 (435)
                      . ..|.. .+.++.+..+.-..+...++-+++.+.+.+.+..++.+.
T Consensus       225 G~n~r~s-el~Aaigl~qL~~l~~~~~~R~~~~~~y~~~l~~~~~~~  270 (371)
T d2fnua1         225 GHNFRLN-EIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFT  270 (371)
T ss_dssp             CCBCCCC-HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred             ccccccc-chhhhhhhhhhhhccchhhhhhhhhhhhccccccccccc
Confidence            1 12222 222333333333346666666667777777777666544

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.67  E-value=4.5e-16  Score=150.32  Aligned_cols=210  Identities=21%  Similarity=0.187  Sum_probs=149.4

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----cC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----FG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----~g  246 (435)
                      |....+|+    .++++-|+.   ..+++++|..|+..++.++.++++.        |++++..|.+....++.    +|
T Consensus        59 PT~~~LE~----~la~LEg~~---~a~~~~SGmaAi~~~l~~l~~~Gd~--------vl~~~~~Yg~t~~l~~~~~~~~G  123 (392)
T d1gc0a_          59 PTLNLLEA----RMASLEGGE---AGLALASGMGAITSTLWTLLRPGDE--------VLLGNTLYGCTFAFLHHGIGEFG  123 (392)
T ss_dssp             HHHHHHHH----HHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSCCSHHHHHHHHTGGGGT
T ss_pred             hHHHHHHH----HHHHHhCCc---ceeehhhHHHHHHHHHHhhccCCCe--------eecccccchhhhhhhhhhhccCC
Confidence            44444444    566677653   5688899999999999999888877        99999999996665544    59


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL  326 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~  326 (435)
                      +++..++.     .|+++++++++++|++|++..|+||+..+.|+++|+++|+++|++++||..++....         .
T Consensus       124 i~~~~~d~-----~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~~---------~  189 (392)
T d1gc0a_         124 VKLRHVDM-----ADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYL---------Q  189 (392)
T ss_dssp             CEEEEECT-----TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHH---------C
T ss_pred             cccccCCc-----cCHHHHHHhCCCCCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCccc---------c
Confidence            99988874     378999999999999999999999999999999999999999999999999875544         1


Q ss_pred             CCCCCCCCCccEEEecCCCCCCccC--CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210        327 PPFDFSLPGVTSISVDTHKYGFTPK--GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG  404 (435)
Q Consensus       327 ~~~d~~~~gvd~~~~s~hK~~~~p~--g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g  404 (435)
                      .|+++   |+|++..|..||..|-.  -.|+++.+++.+.+..........|+.          ..  .-.+|..++-  
T Consensus       190 ~Pl~~---GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~----------~~--p~da~ll~rg--  252 (392)
T d1gc0a_         190 RPLEL---GADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAV----------LS--PHDAALLMRG--  252 (392)
T ss_dssp             CGGGG---TCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCC----------CC--HHHHHHHHHH--
T ss_pred             ChHHh---CCCEEEEecceeecCCcccccccccchhHHHHHHHHHHHHHccCCc----------CC--hhhHHHHHhc--
Confidence            25554   89999999999965532  236655554433321111111112221          11  1356666554  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Q psy10210        405 FEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       405 ~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .+.+..|+++..+.+.+..+.|
T Consensus       253 l~TL~lRm~~~~~nA~~lA~~L  274 (392)
T d1gc0a_         253 IKTLNLRMDRHCANAQVLAEFL  274 (392)
T ss_dssp             HTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHH
Confidence            4556666666666655554443

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.67  E-value=1.3e-15  Score=147.22  Aligned_cols=214  Identities=16%  Similarity=0.165  Sum_probs=149.8

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHc
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYF  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~  245 (435)
                      .|....+|.    .++.+-|+.   ..+++++|..|+..++.++.++|+.        |++++..|.+....    ...+
T Consensus        62 nPT~~~LE~----~la~LEgg~---~a~~~sSGmaAi~~~l~~ll~~Gd~--------vi~~~~~Yg~t~~~~~~~l~~~  126 (397)
T d1y4ia1          62 NPTTDALEK----KLAVLERGE---AGLATASGISAITTTLLTLCQQGDH--------IVSASAIYGCTHAFLSHSMPKF  126 (397)
T ss_dssp             CHHHHHHHH----HHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESSSCHHHHHHHHTHHHHT
T ss_pred             CHHHHHHHH----HHHHHhCCc---cceeehHHHHHHHHHHhhccCCCCe--------eeeecccccccchhhhcccCCC
Confidence            455555554    566666653   4688899999999999999988887        99999999885444    4567


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |+++..++.     .|++.++++++++|++|+++.|.||+..+.|+++|+++|+++|++++||..++....         
T Consensus       127 Gi~~~~vd~-----~d~~~~~~~i~~~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~---------  192 (397)
T d1y4ia1         127 GINVRFVDA-----GKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYC---------  192 (397)
T ss_dssp             TCEEEEECT-----TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT---------
T ss_pred             ceEeeccCC-----CCHHHHHHhcCCCCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCccc---------
Confidence            999998874     378999999999999999999999999999999999999999999999999764322         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      ..|++   .|+|++..|..||..|-..  .|+++.+++.+.+..+.......|+.          ..  .-.+|..++-+
T Consensus       193 ~~Pl~---~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~----------l~--p~~a~l~~rgl  257 (397)
T d1y4ia1         193 QQPLQ---LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGC----------MS--PFNAWLTLRGV  257 (397)
T ss_dssp             CCGGG---GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCC----------CC--HHHHHHHHHHH
T ss_pred             Ccchh---cCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCc----------CC--HHHHHHHHcCc
Confidence            12444   4899999999999655422  36655554433322111111122321          11  13677666554


Q ss_pred             cHHHHHHHHHHHHHHHHHH---HHhcCCc
Q psy10210        404 GFEAQVWICVRYHFNYKSC---LQNLSDL  429 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~---~~~l~~l  429 (435)
                        +.+.-|+++..+.+.+.   +++.+.+
T Consensus       258 --~TL~lRm~~~~~nA~~lA~~L~~hp~V  284 (397)
T d1y4ia1         258 --KTLGIRMERHCENALKIARFLEGHPSI  284 (397)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             --CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence              44555555555555444   4444555

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.66  E-value=2.1e-15  Score=148.39  Aligned_cols=195  Identities=13%  Similarity=0.047  Sum_probs=133.5

Q ss_pred             cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHH--HH
Q psy10210        136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACK--AY  213 (435)
Q Consensus       136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~--a~  213 (435)
                      ...|.+..|.+++|+++++.+.+..... .                        .+....++.+.|++.++..+..  ..
T Consensus        66 ~~~Y~p~~G~~~lr~aia~~~~~~~~~~-~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (412)
T d1yaaa_          66 NHEYLGITGLPSLTSNAAKIIFGTQSDA-L------------------------QEDRVISVQSLSGTGALHISAKFFSK  120 (412)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHCTTCHH-H------------------------HTTCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhcccCcc-c------------------------cccceeEEecccchhHHHHHHHHHhc
Confidence            4467888899999999999986542210 0                        0111123333455555555443  33


Q ss_pred             HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhh---cCceEEEEeCCCCCcccc
Q psy10210        214 RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTM  288 (435)
Q Consensus       214 ~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~  288 (435)
                      .++++.        |++++|+|+.+...++..|++++.+|+.  .++..+.+.+++.+.   ++++++++++||||||.+
T Consensus       121 ~~~gd~--------Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~  192 (412)
T d1yaaa_         121 FFPDKL--------VYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLD  192 (412)
T ss_dssp             HCTTCC--------EEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCC
T ss_pred             cCCCCE--------EecccccCchhHHHHHHcCCceecccccccccccccchhhhcccccCCCceEEEEecCCCCCcccc
Confidence            445665        9999999999999999999999999974  556778888877765   467899999999999999


Q ss_pred             ---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC--CCCCCCCccEEEecCCCC-CCccCCcEEEEEeCCc
Q psy10210        289 ---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP--FDFSLPGVTSISVDTHKY-GFTPKGSSVVLYRDLK  362 (435)
Q Consensus       289 ---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~--~d~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~  362 (435)
                         +.+++|+++|+++++++++|++|.++.+.-..........  .........+++.|+.|. +..+..+|+++...+.
T Consensus       193 ~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~  272 (412)
T d1yaaa_         193 PTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTK  272 (412)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCS
T ss_pred             CCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEecCCccccCcCceEEEEEchhh
Confidence               6799999999999999999999998865200000000000  001112235667777885 4456789998777654


Q ss_pred             c
Q psy10210        363 Y  363 (435)
Q Consensus       363 ~  363 (435)
                      .
T Consensus       273 ~  273 (412)
T d1yaaa_         273 Q  273 (412)
T ss_dssp             C
T ss_pred             h
Confidence            3

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.65  E-value=1.8e-15  Score=147.17  Aligned_cols=259  Identities=12%  Similarity=0.024  Sum_probs=175.8

Q ss_pred             cccccCC---hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210        138 SGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR  214 (435)
Q Consensus       138 ~~~~~~g---~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~  214 (435)
                      +.+.|-|   +|+++++..+.+.++..+ ...+....+..++..++.+.+|+++|.+   ..++.++|..|+..++.++.
T Consensus        51 sSndYLGL~~~p~v~~a~~~al~~yG~g-s~~Sr~~~G~~~~h~~LE~~lA~~~g~e---~all~~sG~~An~~~i~~l~  126 (396)
T d2bwna1          51 CGNDYLGMGQHPVVLAAMHEALEAVGAG-SGGTRNISGTTAYHRRLEAEIAGLHQKE---AALVFSSAYNANDATLSTLR  126 (396)
T ss_dssp             SCSCTTSGGGCHHHHHHHHHHHHHHCSC-CCSBTTTBCCBHHHHHHHHHHHHHTTCS---EEEEESCHHHHHHHHHHHHH
T ss_pred             EcccccCcCCCHHHHHHHHHHHHHhCCC-ccccccccCCchHHHHHHHHHHHHhCCC---ceeeeecchHHHHHHHHHHh
Confidence            3444555   899999999999986543 3444455666778888889999999885   45888888999999998875


Q ss_pred             HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccC
Q psy10210        215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDD  290 (435)
Q Consensus       215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~  290 (435)
                      ..+.      ++.|+.....|.++...++..+++++.++.+     |++++++.+.    .+.++|++....+.+|.+.|
T Consensus       127 ~~~~------~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-----d~~~l~~l~~~~~~~~~~~iv~egvySmdGd~ap  195 (396)
T d2bwna1         127 VLFP------GLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP  195 (396)
T ss_dssp             HHST------TCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC
T ss_pred             cccC------CCceeehhhhhhccchhhhccccCceEeecc-----hHHHhhhHHhhhcccCceeEEEEeeccCcccccc
Confidence            4321      1237778889999999999999999888753     5566665553    24578888899999999999


Q ss_pred             HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210        291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV  370 (435)
Q Consensus       291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~  370 (435)
                      +++|.++|++||+++++||+|+-+++   +..|.+..........+|+++.++.|. +|..| |+ +..+++..+.....
T Consensus       196 l~~l~~L~~~y~~~L~vDeAHs~Gv~---G~~G~G~~~~~~~~~~~di~~gTlsKa-~g~~G-g~-v~~~~~~i~~l~~~  269 (396)
T d2bwna1         196 IKEICDIAEEFGALTYIDEVHAVGMY---GPRGAGVAERDGLMHRIDIFNGTLAKA-YGVFG-GY-IAASARMVDAVRSY  269 (396)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTS---STTSCCHHHHHTCGGGCSEEEEESSST-TCSCC-EE-EEECHHHHHHHHHH
T ss_pred             cHhHHHHhhhhcceeeeccceeeeee---ccccccchhhcCCceeeeeeeeccccc-ccccc-cc-cchhHHHHHHHHhh
Confidence            99999999999999999999998876   233433221111123479999999999 45554 45 55666655443222


Q ss_pred             cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH---HHHHHHHHHHHHHHHHh
Q psy10210        371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ---VWICVRYHFNYKSCLQN  425 (435)
Q Consensus       371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~---~~~~~~~~~~~~~~~~~  425 (435)
                      ...+        ...++-+...++++.+++..+..+..   +++.....+.++..+..
T Consensus       270 ~~~~--------ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~  319 (396)
T d2bwna1         270 APGF--------IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA  319 (396)
T ss_dssp             CHHH--------HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchh--------hhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence            2111        12234444555566666666543333   33334444455554443

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.1e-15  Score=144.99  Aligned_cols=266  Identities=17%  Similarity=0.053  Sum_probs=173.4

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+++..   +++|++.+++.+.+.+.......      .......++.+.++++.+.   +.+.++++|+|
T Consensus        39 dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~v~~~~sGse  109 (404)
T d2byla1          39 EGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRA------FYNNVLGEYEEYITKLFNY---HKVLPMNTGVE  109 (404)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTT------EEESSHHHHHHHHHHHHTC---SEEEEESSHHH
T ss_pred             CCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhhCCCcccc------cccchHHHHHHhhhhcccc---cccccccCccc
Confidence            445555544443332   24899999999998874332211      1112233444566677655   37899999999


Q ss_pred             HHHHHHHHHHHHhhhhcCC--CCCeEEEeCCCchhHHHHHHHc--------C-----CEEEEEecCCCccccHHHHHHHh
Q psy10210        205 SIMMACKAYRDYAREEKGI--SLPEIVLPTTAHPAFDKAANYF--------G-----MKVKHIRLTSSYTVDLAALQSAI  269 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~--~~~~viv~~~~~~~~~~~~~~~--------g-----~~v~~vp~~~~~~~d~~~l~~~i  269 (435)
                      |+..|++..+......++.  .+..++....+|++....+...        +     ..+..+|.     .|++++++++
T Consensus       110 A~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~l  184 (404)
T d2byla1         110 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERAL  184 (404)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-----TCHHHHHHHH
T ss_pred             cchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-----cCHHHHHHhc
Confidence            9999999998776553332  2456777776666522222111        1     12444553     3788999998


Q ss_pred             hc-CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEec
Q psy10210        270 TG-NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVD  342 (435)
Q Consensus       270 ~~-~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s  342 (435)
                      .+ ++.+|++.......|.+    +.+++|.++|++||+++|+||++.||..        ....+.+...|+  |+++++
T Consensus       185 ~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR--------~G~~~a~~~~gv~PDi~~~g  256 (404)
T d2byla1         185 QDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR--------TGRWLAVDYENVRPDIVLLG  256 (404)
T ss_dssp             TSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTT--------TSSSSGGGGGTCCCSEEEEC
T ss_pred             CCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeecccccccc--------ccccchhhhcCCCCCEEEEC
Confidence            64 67788887767667766    4499999999999999999999998733        223445555554  888877


Q ss_pred             CCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        343 THKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       343 ~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                        |.+.+. ..+|.++.++ ++.+.   +.+...+++++.       +..+.+++.++|+.+.++++.+++++..+.+.+
T Consensus       257 --K~l~gG~~p~~av~~~~-~i~~~---~~~~~~~~T~~g-------npl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~  323 (404)
T d2byla1         257 --KALSGGLYPVSAVLCDD-DIMLT---IKPGEHFSTYGG-------NPLGCRVAIAALEVLEEENLAENADKLGIILRN  323 (404)
T ss_dssp             --GGGGTTSSCCEEEEECH-HHHTT---SCTTSSCCSSTT-------CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             --chhhCCCccceeeeech-hhhhc---cCCCCCCcCCCc-------CHHHHHHHHHHHHHHHhcCchhhhhHhhHHHHH
Confidence              764443 5667766554 44332   122223333322       233447899999999999999999999999998


Q ss_pred             HHHhcCC
Q psy10210        422 CLQNLSD  428 (435)
Q Consensus       422 ~~~~l~~  428 (435)
                      .++++..
T Consensus       324 ~l~~l~~  330 (404)
T d2byla1         324 ELMKLPS  330 (404)
T ss_dssp             HHHTSCT
T ss_pred             HHHhhcc
Confidence            8887643

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.62  E-value=2.7e-15  Score=149.28  Aligned_cols=180  Identities=12%  Similarity=0.056  Sum_probs=126.9

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV  249 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v  249 (435)
                      .|.+.++|.    .+++++|.+   .+++|++||.|+.++++++.++++.        |+.... +.+........|+..
T Consensus        74 dpt~~~lE~----~~a~l~G~e---~al~~~SGt~An~~a~~~l~~~Gd~--------Vi~~~~-f~~~~~~i~~~g~~~  137 (456)
T d1c7ga_          74 SENFYHLEK----TVKELFGFK---HIVPTHQGRGAENLLSQLAIKPGQY--------VAGNMY-FTTTRFHQEKNGATF  137 (456)
T ss_dssp             CHHHHHHHH----HHHHHHCCS---EEEEESSHHHHHHHHHHHHCCTTEE--------EEESSC-CHHHHHHHHHTTEEE
T ss_pred             CchHHHHHH----HHHHHhCCC---eEEECCCHHHHHHHHHHHhcCCCCe--------EecCcc-hHHHHHHHHHcCcee
Confidence            355666654    567788875   5689999999999999999877765        665544 555555567778887


Q ss_pred             EEEecC----------CCccccHHHHHHHhhc----CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccc
Q psy10210        250 KHIRLT----------SSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCL  311 (435)
Q Consensus       250 ~~vp~~----------~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~  311 (435)
                      +.+..+          .++.+|+++++++|++    ++.++++++++|+.|..    +++++|.++|++||+++|+|+|+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~  217 (456)
T d1c7ga_         138 VDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATR  217 (456)
T ss_dssp             EECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred             eeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcch
Confidence            766542          2467899999999975    35689999999988743    78999999999999999999998


Q ss_pred             cchhhhcccccCCCCCCCCCC------CCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        312 GGFLAPFMSAAGYPLPPFDFS------LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       312 ~~~~~~~~~~~g~~~~~~d~~------~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      ......|.+....+....+..      ...+|++++|.||.+.+|.| |+++.+++++.+.
T Consensus       218 ~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~~G-G~i~~~~~~l~~~  277 (456)
T d1c7ga_         218 CVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIG-GFLCMNDEEMFSA  277 (456)
T ss_dssp             HHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSC-EEEEESCHHHHHH
T ss_pred             hhcchhhhcccccccCCCChhhhccccccccccEEEeccccccccce-eEEEcCCHHHHHH
Confidence            654332222111100001100      02369999999999766665 7877787766543

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=4.2e-15  Score=143.13  Aligned_cols=201  Identities=17%  Similarity=0.205  Sum_probs=141.2

Q ss_pred             HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCC
Q psy10210        182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSS  257 (435)
Q Consensus       182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~  257 (435)
                      +.++.+-|+.   ..+++++|..|+. ++.++..+++.        |+++.+.|.+....++.    +|+++..++.   
T Consensus        56 ~~la~LE~~~---~a~~fsSGMaAis-all~ll~~Gd~--------vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~---  120 (380)
T d1ibja_          56 SLLAKLDKAD---RAFCFTSGMAALS-AVTHLIKNGEE--------IVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---  120 (380)
T ss_dssp             HHHHHHHTCS---EEEEESSHHHHHH-HHHTTSCTTCE--------EEEESSCCHHHHHHHHHTSGGGTCEEEEECT---
T ss_pred             HHHHHHcCCc---eEEehhhHHHHHH-HHHHhhCCCCE--------EEEEecccccccchhhhhhccccccccccCc---
Confidence            3566666653   4678888899986 56666666666        99999999997666554    5888888764   


Q ss_pred             ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210        258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT  337 (435)
Q Consensus       258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd  337 (435)
                        .|.++++++++++|++|+++.|+||+..+.|+++|+++|+++|++++||..++..+.         ..|++   .|+|
T Consensus       121 --~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~---------~~Pl~---~GaD  186 (380)
T d1ibja_         121 --TKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL---------SRPLE---LGAD  186 (380)
T ss_dssp             --TSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT---------CCGGG---TTCS
T ss_pred             --chHHHHHHHhccCccEEEeccccccccccccHHHHHHHHHHcCCeEEeecccccccc---------ccccc---cCCC
Confidence              368899999999999999999999999999999999999999999999999865332         12444   4899


Q ss_pred             EEEecCCCCCCccC--CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210        338 SISVDTHKYGFTPK--GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY  415 (435)
Q Consensus       338 ~~~~s~hK~~~~p~--g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~  415 (435)
                      ++..|..||..|-.  -.|.++.+++++.+........ .|+          ...  ...+|..++-  .+.+..|+++.
T Consensus       187 iVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~-~G~----------~l~--p~~a~ll~rg--l~Tl~lRm~~~  251 (380)
T d1ibja_         187 IVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNS-EGS----------GLA--PFDCWLCLRG--IKTMALRIEKQ  251 (380)
T ss_dssp             EEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHH-TTC----------BCC--HHHHHHHHHH--HTTHHHHHHHH
T ss_pred             EEEecccceeccccCccccccccchhhHHHHHHhhccc-cCC----------cCC--HHHHHHHHhc--chhhhhhHHHH
Confidence            99999999965542  2466666665554332211111 111          111  1356666554  45566666666


Q ss_pred             HHHHHHHHHhc
Q psy10210        416 HFNYKSCLQNL  426 (435)
Q Consensus       416 ~~~~~~~~~~l  426 (435)
                      .+++.+..+.|
T Consensus       252 ~~nA~~lA~~L  262 (380)
T d1ibja_         252 QENARKIAMYL  262 (380)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66655554433

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.59  E-value=6.1e-14  Score=135.88  Aligned_cols=186  Identities=13%  Similarity=0.045  Sum_probs=131.8

Q ss_pred             HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCe
Q psy10210        149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPE  227 (435)
Q Consensus       149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~  227 (435)
                      .+++.+.++....++     ..|.+.++|.    .+++++|..   .++.+++||.|+.+|++++ ..++        ++
T Consensus         4 ~~~~~~~l~~~~~~~-----~G~~~~~fE~----~~~~~~~~~---~~~~~~SgT~Al~lal~~l~~~~g--------de   63 (374)
T d1o69a_           4 LKYIEEVFKSNYIAP-----LGEFVNRFEQ----SVKDYSKSE---NALALNSATAALHLALRVAGVKQD--------DI   63 (374)
T ss_dssp             HHHHHHHHHHTTTSC-----TTHHHHHHHH----HHHHHHCCS---EEEEESCHHHHHHHHHHHTTCCTT--------CE
T ss_pred             HHHHHHHHhcCCcCC-----CCHHHHHHHH----HHHHHHCcC---eEEEeCCHHHHHHHHHHHcCCCCc--------CE
Confidence            356777777643332     1456666665    556677764   5789999999999999986 2233        45


Q ss_pred             EEEeCCCchhHHHHHHHcCCEEEEEecCCCc-cccHH--HHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCc
Q psy10210        228 IVLPTTAHPAFDKAANYFGMKVKHIRLTSSY-TVDLA--ALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP  304 (435)
Q Consensus       228 viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~-~~d~~--~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~  304 (435)
                      |++|+.+|++...++...|++++.++++++. ..+.+  +.+..+++++++|++.+.   .|...++++|.++|+++|++
T Consensus        64 Vi~p~~t~~a~~~~~~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~~d~~~i~~~~~~~~i~  140 (374)
T d1o69a_          64 VLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHL---YGNAAKMDEIVEICKENDIV  140 (374)
T ss_dssp             EEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECG---GGCCCCHHHHHHHHHHTTCE
T ss_pred             EEeCCcchHhhHHHHhhccceeEecccccccccccccccccchhccccccccccccc---ccchhhhHHHHHHhhccCcc
Confidence            9999999999999999999999999998543 33333  334566678899987765   78899999999999999999


Q ss_pred             EEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210        305 VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC  366 (435)
Q Consensus       305 livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~  366 (435)
                      ||+|+|++-+...-....|    .    ...+.++|+...|.+.. .|.|+++++++++.+.
T Consensus       141 vIED~a~a~g~~~~~~~~G----~----~gd~~~fSf~~~K~l~t-geGG~i~tnn~~~~~~  193 (374)
T d1o69a_         141 LIEDAAEALGSFYKNKALG----T----FGEFGVYSYNGNKIITT-SGGGMLIGKNKEKIEK  193 (374)
T ss_dssp             EEEECTTCTTCEETTEETT----S----SSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHH
T ss_pred             hhhhhhhhhcceECCeecC----C----CCceEEEeccCcccccc-ccceeehhhhHHHHHh
Confidence            9999999765431111111    1    11234556666688544 4458888888876543

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1.5e-14  Score=142.69  Aligned_cols=267  Identities=14%  Similarity=0.011  Sum_probs=170.0

Q ss_pred             CCCCCCCCcccccccC---ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVYY---YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~~---g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...++++..   ++|++.+++.+++.+.....+     .....+.+.++.+.+.+++.....+.++++++|+|
T Consensus        38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGse  112 (425)
T d1sffa_          38 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF-----QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSE  112 (425)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCT-----TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHH
T ss_pred             CCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcCCccc-----ccccCcHHHHHHHHHHhhhhhcccceeeeeccccc
Confidence            4455555444433322   489999999998877432211     12234566778888888886544457999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cCC-------------EEEEEecC--CCccc--cH-HHH
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-FGM-------------KVKHIRLT--SSYTV--DL-AAL  265 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g~-------------~v~~vp~~--~~~~~--d~-~~l  265 (435)
                      |+..|++.++....      +.+|+....+|++....+.. .|.             .....+.+  .....  .. ...
T Consensus       113 A~e~Alk~ar~~t~------r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (425)
T d1sffa_         113 AVENAVKIARAATK------RSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASI  186 (425)
T ss_dssp             HHHHHHHHHHHHHT------CCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHH
T ss_pred             hhhhHHHHhhhhhc------ccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHH
Confidence            99999999987654      35688888888885444333 221             12222222  11101  11 111


Q ss_pred             HHHh-----hcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210        266 QSAI-----TGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG-  335 (435)
Q Consensus       266 ~~~i-----~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g-  335 (435)
                      ++.+     ..++.+|+++......|.+    +.++.|.++|++||+++|+||++.|+...     |   ..+.+...| 
T Consensus       187 ~~~~~~~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~-----g---~~~a~~~~gv  258 (425)
T d1sffa_         187 HRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRT-----G---TLFAMEQMGV  258 (425)
T ss_dssp             HHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSGGGGTTS
T ss_pred             HHHHHhcccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCc-----c---hhhHHHhcCC
Confidence            1111     1356788888776666766    56999999999999999999999987431     2   233333334 


Q ss_pred             -ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        336 -VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       336 -vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                       .|+++++  |.+.+..++|+++.+++- .+.   +.+...+++|+..       ..+++++.++|+.+.++++.+++++
T Consensus       259 ~PDi~~~g--K~l~gG~P~~av~~~~~i-~~~---~~~~~~~~T~~gn-------pl~~aaa~a~L~~i~~~~~~~~~~~  325 (425)
T d1sffa_         259 APDLTTFA--KSIAGGFPLAGVTGRAEV-MDA---VAPGGLGGTYAGN-------PIACVAALEVLKVFEQENLLQKAND  325 (425)
T ss_dssp             CCSEEEEC--GGGGTSSCCEEEEEEHHH-HTT---SCTTSBCCSSSSC-------HHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred             Cccceecc--cccCCCcceEEEEEcHHH-HHh---hCCCCCCCCCCcC-------HHHHHHHHHHHHHHHHhhhhhhhhh
Confidence             4888877  765555678887777653 222   1233334443322       3344789999999999999999999


Q ss_pred             HHHHHHHHHHhc
Q psy10210        415 YHFNYKSCLQNL  426 (435)
Q Consensus       415 ~~~~~~~~~~~l  426 (435)
                      ..+++...++++
T Consensus       326 ~g~~l~~~l~~~  337 (425)
T d1sffa_         326 LGQKLKDGLLAI  337 (425)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhh
Confidence            888877776543

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.59  E-value=2e-14  Score=141.88  Aligned_cols=260  Identities=9%  Similarity=-0.009  Sum_probs=165.8

Q ss_pred             CCCCCCCCCcccccccC---ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210        127 RGHYDWKHGRVSGAVYY---YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT  203 (435)
Q Consensus       127 ~~~~~~~~~~~~~~~~~---g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt  203 (435)
                      .++..|.+...+.++..   ++|++.+++.+++.+....  ..      ......++.+.+.++.+.  .+.+.++++|+
T Consensus        49 ~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~~~--~~------~~~~~~~la~~~~~~~~~--~~~v~f~~sGs  118 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSF--GA------PCALENVLAEMVNDAVPS--IEMVRFVNSGT  118 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCSCC--SS------CCHHHHHHHHHHHHHSTT--CSEEEEESSHH
T ss_pred             CCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcCcc--cc------chhHHHHHHHHHHhhCCc--cccccccCCcH
Confidence            34455555433333222   4899999999988763211  11      113445566677777643  24789999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH--------HHcCC------------EEEEEecCCCccccHH
Q psy10210        204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA--------NYFGM------------KVKHIRLTSSYTVDLA  263 (435)
Q Consensus       204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~--------~~~g~------------~v~~vp~~~~~~~d~~  263 (435)
                      ||++.|++.++....      +.+|+..+.+|++....+        ...+.            +...+|     .-|++
T Consensus       119 eA~e~Alk~ar~~t~------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----~~~~~  187 (427)
T d2gsaa_         119 EACMAVLRLMRAYTG------RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-----YNDLE  187 (427)
T ss_dssp             HHHHHHHHHHHHHHC------CCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-----TTCHH
T ss_pred             HHHHHHHHHHHHhcC------CCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-----cchHH
Confidence            999999999886643      356888888887632211        11111            122222     24789


Q ss_pred             HHHHHhhc---CceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210        264 ALQSAITG---NTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG-  335 (435)
Q Consensus       264 ~l~~~i~~---~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g-  335 (435)
                      ++++.+.+   +..+|++.......|.+.+    +++|.++|++||+++|+||++.||-.      |.   .+.....| 
T Consensus       188 ~le~~~~~~~~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~------g~---~~~~~~~gi  258 (427)
T d2gsaa_         188 AVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRI------AY---GGVQEKFGV  258 (427)
T ss_dssp             HHHHHHTTSTTTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTT------BT---TCHHHHTTC
T ss_pred             HHHHHHHhCCCCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeecccccccee------cc---cchHHhcCC
Confidence            99999874   5678888877666787744    99999999999999999999998732      21   12222223 


Q ss_pred             -ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210        336 -VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR  414 (435)
Q Consensus       336 -vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~  414 (435)
                       .|+++++  |.+.+....|.++.++ ++.+..........+++|+..+       .+++++.++++.+.++++.+++++
T Consensus       259 ~PDi~~~g--K~lggG~p~~a~~~~~-~i~~~~~~~~~~~~~~T~~gnp-------la~AAala~Le~i~~~~l~~~~~~  328 (427)
T d2gsaa_         259 TPDLTTLG--KIIGGGLPVGAYGGKR-EIMQLVAPAGPMYQAGTLSGNP-------LAMTAGIKTLELLRQPGTYEYLDQ  328 (427)
T ss_dssp             CCSEEEEC--GGGGTTSCCEEEEECH-HHHTTBTTTSSBCCCCTTTTCH-------HHHHHHHHHHHHHTSTTHHHHHHH
T ss_pred             CHHHHhhh--hccCCCcceeeeeehH-HHHHHhcccCCCcCCCCCCCCc-------hhhHHHHHhhHHhhhhhHHhhhhH
Confidence             4898888  5434444556656555 4443321111223333333333       344788999999998889999988


Q ss_pred             HHHHHHHHHHhc
Q psy10210        415 YHFNYKSCLQNL  426 (435)
Q Consensus       415 ~~~~~~~~~~~l  426 (435)
                      ..+++++.++++
T Consensus       329 ~g~~l~~~L~~l  340 (427)
T d2gsaa_         329 ITKRLSDGLLAI  340 (427)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            888887777654

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=9.3e-15  Score=140.76  Aligned_cols=211  Identities=17%  Similarity=0.139  Sum_probs=149.8

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHc
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYF  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~  245 (435)
                      .|....+|+    .++++-|+.   ..+++++|..|+..++.++.++++.        |++++..|.+....    ....
T Consensus        49 nPt~~~le~----~la~LEgg~---~a~~~sSGMaAi~~~l~~l~~~gd~--------vv~~~~~yg~t~~~~~~~~~~~  113 (384)
T d1cs1a_          49 NPTRDVVQR----ALAELEGGA---GAVLTNTGMSAIHLVTTVFLKPGDL--------LVAPHDCYGGSYRLFDSLAKRG  113 (384)
T ss_dssp             CHHHHHHHH----HHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEETTCCHHHHHHHHHHHTTT
T ss_pred             CHHHHHHHH----HHHHHhCCC---ceEEecChHHHHHHHHhhcccccce--------ecccccccchhhhhhhhhhccc
Confidence            345555554    566666653   5688999999999999999888877        99999999885444    4445


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      |.++..+..     .|.+++++++.++|++|+++.|.||+..+.|+++|+++|+++|++++||..++....         
T Consensus       114 g~~~~~~d~-----~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~---------  179 (384)
T d1cs1a_         114 CYRVLFVDQ-----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPAL---------  179 (384)
T ss_dssp             SCEEEEECT-----TCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT---------
T ss_pred             ccccccccC-----CCHHHHHhhccccccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCccc---------
Confidence            777777753     378899999999999999999999999999999999999999999999999854322         


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      ..|++   .|+|++..|..||..|-..  .|+++.+++.+......... ..|.          ...  ...+|..++  
T Consensus       180 ~~Pl~---~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~-~~G~----------~~~--p~~a~ll~r--  241 (384)
T d1cs1a_         180 QNPLA---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWAN-NIGV----------TGG--AFDSYLLLR--  241 (384)
T ss_dssp             CCGGG---GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHH-HHTC----------BCC--HHHHHHHHH--
T ss_pred             ccccc---cCCCEEEEccccccccCCCcccccccCCchhhhhhhhhhhh-hhhh----------ccc--cccHHHHhh--
Confidence            12444   4899999999999654422  36666666554332111111 1111          111  135676655  


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      |.+.+.-|+++..+.+.+..+.|+
T Consensus       242 gL~TL~lRm~~~~~nA~~lA~~L~  265 (384)
T d1cs1a_         242 GLRTLVPRMELAQRNAQAIVKYLQ  265 (384)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcc
Confidence            445677777777777666665553

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.58  E-value=3.7e-14  Score=135.31  Aligned_cols=224  Identities=14%  Similarity=0.117  Sum_probs=156.5

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCC---chhHHHH--HHHcC
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA---HPAFDKA--ANYFG  246 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~---~~~~~~~--~~~~g  246 (435)
                      .+.++|..+.+...++||+... + +=..+|+.|+..++.++.+++|+        |+..+..   |.+....  .....
T Consensus        66 ~id~iE~la~~ra~~lF~a~~a-n-Vqp~SGs~An~av~~all~pGD~--------im~l~l~~GGHlshg~~~~~~g~~  135 (405)
T d1kl1a_          66 YVDIVEELARERAKQLFGAEHA-N-VQPHSGAQANMAVYFTVLEHGDT--------VLGMNLSHGGHLTHGSPVNFSGVQ  135 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSEE-E-CCCSSHHHHHHHHHHHHCCTTCE--------EEEECGGGTCCGGGTCTTSHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCcc-e-eeccCchHHHHHHHHHhcCCCCE--------EEEeecccccccccCccccccceE
Confidence            4556777777888899988643 3 33457799999999999999998        8877754   4332222  22224


Q ss_pred             CEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        247 MKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       247 ~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      .+.+.+|++ +++.+|.+++++.... ++++|++..-.+|  ..-|++++.++|++.|.++++|.+|-.++..-    |.
T Consensus       136 ~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--r~~d~~~~reIad~vga~l~~D~aH~~GLIa~----g~  209 (405)
T d1kl1a_         136 YNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYP--RIIDFAKFREIADEVGAYLMVDMAHIAGLVAA----GL  209 (405)
T ss_dssp             SEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT----TS
T ss_pred             EEEEEeccchhcccccHHHHHHHHHhhCcceEEecccccc--cccChHHHHHHHhhhCCEEecchhhHhhhhhh----hh
Confidence            678888998 7788999999998764 8899887766554  34589999999999999999999998877742    32


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc-ccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ-YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~-~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      -..|+    +++|+++.++||.+.||.| |++++++ ++.+.. ....|.          ++|+.-...+|+...++...
T Consensus       210 ~~~P~----~~aDvvt~tThKtlrGPrg-g~I~~~~-~~~~~i~~avfPg----------~qggp~~~~iAa~Aval~Ea  273 (405)
T d1kl1a_         210 HPNPV----PYAHFVTTTTHKTLRGPRG-GMILCQE-QFAKQIDKAIFPG----------IQGGPLMHVIAAKAVAFGEA  273 (405)
T ss_dssp             SCCST----TTCSEEEEESSSTTCCCSC-EEEEECH-HHHHHHHHHHTTT----------TCSSCCHHHHHHHHHHHHHH
T ss_pred             cCChh----hhhhheeccccccccCCCC-ceEEecc-hhHHHHHhhhCcc----------cccCcchhHHHHHHHHHHHH
Confidence            22344    3589999999999889886 7877765 333221 112232          33444444555555566665


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      ..+.+.+..+++.++++.+.+.|.
T Consensus       274 ~~~~fk~Ya~qvv~NAkaLa~~L~  297 (405)
T d1kl1a_         274 LQDDFKAYAKRVVDNAKRLASALQ  297 (405)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHh
Confidence            456677777777777777666553

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.57  E-value=3.3e-14  Score=134.67  Aligned_cols=208  Identities=16%  Similarity=0.133  Sum_probs=148.9

Q ss_pred             HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecC
Q psy10210        180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLT  255 (435)
Q Consensus       180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~  255 (435)
                      +.+.++.+-|+.   ..+.+++|..|+..++.++.++|+.        |++++..|.+.    .+..+.+|+++..++..
T Consensus         3 LE~~la~Leg~~---~a~~~sSGMaAi~~~l~~ll~~Gd~--------iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~   71 (331)
T d1pffa_           3 LEGKIAKLEHAE---ACAATASGMGAIAASVWTFLKAGDH--------LISDDCLYGCTHALFEHQLRKFGVEVDFIDMA   71 (331)
T ss_dssp             HHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             HHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHhCCCCE--------EEEeCCCchHHHHHHHHHHHhcCeEEEEeccc
Confidence            456778887764   4688899999999999999888877        99999999874    44466679999998753


Q ss_pred             CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH-HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210        256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG-EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP  334 (435)
Q Consensus       256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la-~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~  334 (435)
                           |++.++++++++|++|++..|+||+..+.|++++.+++ +++|++++||..++....         ..|++   .
T Consensus        72 -----d~~~~~~~i~~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~---------~~pl~---~  134 (331)
T d1pffa_          72 -----VPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPIL---------TNPLD---L  134 (331)
T ss_dssp             -----STTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHH---------CCGGG---G
T ss_pred             -----chhhHhhhcccccceeeeecccccccccccchhhhhhhhcccCceEEeecccccccc---------ccccc---c
Confidence                 78889999999999999999999999999999999985 678999999999876554         12444   4


Q ss_pred             CccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHH
Q psy10210        335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC  412 (435)
Q Consensus       335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~  412 (435)
                      |+|++..|..||..|-..  .|+++.+++...+..........|.          ...  .-.+|..++  |.+.+..|+
T Consensus       135 GaDiVv~S~TKy~~Gh~d~~~G~v~~~~~~~~~~~~~~~~~~~G~----------~l~--p~~a~ll~r--gl~Tl~~Rm  200 (331)
T d1pffa_         135 GVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGA----------IIS--PHDAWLITR--GTLTLDMRV  200 (331)
T ss_dssp             TCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCC----------CCC--HHHHHHHHH--HHHHHHHHH
T ss_pred             CCCEEEecchhhcCCCCccccccccccccchhhhhhhhhhhccCC----------CCC--HHHHHHHHH--HHHHHHHHH
Confidence            899999999999655322  3665555444332211111111121          111  135666655  556777777


Q ss_pred             HHHHHHHHHHH---HhcCCc
Q psy10210        413 VRYHFNYKSCL---QNLSDL  429 (435)
Q Consensus       413 ~~~~~~~~~~~---~~l~~l  429 (435)
                      ++..+++....   +.-+.+
T Consensus       201 ~~~~~nA~~lA~~L~~hp~V  220 (331)
T d1pffa_         201 KRAAENAQKVAEFLHEHKAV  220 (331)
T ss_dssp             HHHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHhhhhCCcE
Confidence            77766655554   445555

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.57  E-value=6.5e-14  Score=139.74  Aligned_cols=183  Identities=15%  Similarity=0.155  Sum_probs=128.4

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK  250 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~  250 (435)
                      +.+.++|    +.+++++|.+   .+++|++||+|+..++++++++++. .+..++.++.+...|..+.......|...+
T Consensus        75 ~~~~~le----~~~a~l~g~~---~~~~~~sGt~A~~~a~~~~~~~g~~-~~~~~~~~i~~~~h~~t~~~~~~~~g~~~~  146 (465)
T d1ax4a_          75 RNYYDLK----DKAKELFNYD---YIIPAHQGRGAENILFPVLLKYKQK-EGKAKNPVFISNFHFDTTAAHVELNGCKAI  146 (465)
T ss_dssp             HHHHHHH----HHHHHHHCCC---EEEEESSHHHHHHHHHHHHHHHHHH-TTCCSSCEEEESSCCHHHHHHHHHTTCEEE
T ss_pred             hHHHHHH----HHHHHHHCCC---EEEECCCcHHHHHHHHHHHHHHHHh-cCCCCCeEEeccchhhhhHHHHHHcCCeee
Confidence            4444544    4667788764   6899999999999999999999887 666677777777777777777788898887


Q ss_pred             EEec----------CCCccccHHHHHHHhhc----CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEecccc
Q psy10210        251 HIRL----------TSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLG  312 (435)
Q Consensus       251 ~vp~----------~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~  312 (435)
                      .++.          +.++.+|+++++++|.+    .+.+++++.++|..|..    +++++|.++|++||+++|+|+|+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D~~~~  226 (465)
T d1ax4a_         147 NIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF  226 (465)
T ss_dssp             ECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred             cccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence            6643          13577899999999964    35667777777655543    678999999999999999999987


Q ss_pred             chhhhcccc--cCCCCCCC-CC---CCCCccEEEecCCCCCCccCCcEEEEEeCCc
Q psy10210        313 GFLAPFMSA--AGYPLPPF-DF---SLPGVTSISVDTHKYGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       313 ~~~~~~~~~--~g~~~~~~-d~---~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~  362 (435)
                      .+...+...  .+...... +.   .....|+++++.||.+.+|. .|+++.++..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~-~g~l~~~~~~  281 (465)
T d1ax4a_         227 CENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNI-GGLVAIRDNE  281 (465)
T ss_dssp             HHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSS-CEEEEESSCH
T ss_pred             hhhhcccccccccccccchhhhccccccccceeEeecccCccccc-ceeEeecchH
Confidence            554321110  01000000 00   00115899999999965554 5886776653

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.56  E-value=8.5e-14  Score=135.27  Aligned_cols=162  Identities=15%  Similarity=0.112  Sum_probs=123.5

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHc
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYF  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~  245 (435)
                      .|....+|.    .++.+-|+.   ..+.+++|..|+..++.++.++++.        |++++..|.+...    .+..+
T Consensus        57 nPT~~~LE~----~la~LE~~~---~a~~~~SGmaAi~~~~~~l~~~gd~--------il~~~~~Yg~t~~l~~~~~~~~  121 (421)
T d2ctza1          57 NPTVDVLEK----RLAALEGGK---AALATASGHAAQFLALTTLAQAGDN--------IVSTPNLYGGTFNQFKVTLKRL  121 (421)
T ss_dssp             CHHHHHHHH----HHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEECSCCCHHHHHHHHTHHHHT
T ss_pred             CHHHHHHHH----HHHHHhCCC---eEEEecChHHHHHHHHHhhcccccc--------eeecCCcCCchhHHHHHHHhhc
Confidence            355555554    556666553   5688899999999999999888877        9999999988544    44567


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccc-hhhhcccccCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGG-FLAPFMSAAGY  324 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~-~~~~~~~~~g~  324 (435)
                      |+++..++.+    .+.+..++.++++|++|+++.|+||+..+.|+++|+++|+++|++++||..++. ...        
T Consensus       122 gi~~~~~d~~----~~~~~~~~~~~~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~tP~~--------  189 (421)
T d2ctza1         122 GIEVRFTSRE----ERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL--------  189 (421)
T ss_dssp             TCEEEECCTT----CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS--------
T ss_pred             cccceecccc----cCcchhccccCCCceEEEEcCCCcceeEecchHHHHHHHHhcCCceEeccccccccee--------
Confidence            9998887542    235666777889999999999999999999999999999999999999999862 211        


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCc
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLK  362 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~  362 (435)
                       ..|+   ..|+|++..|..||..|-..  .|+++.+++.
T Consensus       190 -~~Pl---~~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~  225 (421)
T d2ctza1         190 -LRPL---AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNF  225 (421)
T ss_dssp             -CCGG---GGTCSEEEEETTTTTTCSSCCCCEEEEECSCS
T ss_pred             -cccc---ccCCcEEEEechhhccCCCCeEEEEEEcCCcc
Confidence             1244   44899999999999655422  3665555543

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.55  E-value=7.4e-14  Score=134.87  Aligned_cols=213  Identities=12%  Similarity=0.044  Sum_probs=145.7

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHc
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYF  245 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~  245 (435)
                      .|....+|+    .++++-|+.   ..+++++|..|+..++.++..+++.        |++++..|.+....+    ..+
T Consensus        66 nPt~~~LE~----~la~LEgg~---~a~~~sSGMaAi~~~l~~l~~~Gd~--------iv~~~~~Yg~t~~l~~~~~~~~  130 (398)
T d1qgna_          66 NPTTVVLEE----KISALEGAE---STLLMASGMCASTVMLLALVPAGGH--------IVTTTDCYRKTRIFIETILPKM  130 (398)
T ss_dssp             CHHHHHHHH----HHHHHHTCS---EEEEESCHHHHHHHHHHHHSCSSCE--------EEEETTSCHHHHHHHHHTGGGG
T ss_pred             ChHHHHHHH----HHHHHhCCc---eEEEecCcchHHHHHHhhccccccc--------ccccccccchhhhhhccccccc
Confidence            355555554    566666653   5688999999999999999888877        999999999865554    445


Q ss_pred             CCEEEEEecCCCccccHH-HHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210        246 GMKVKHIRLTSSYTVDLA-ALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~-~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      |+++..++..     +.+ ..++.+.++|++|+++.|.||+..+.|+++|+++|+++|++++||..++..+.        
T Consensus       131 gi~~~~~~~~-----~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~--------  197 (398)
T d1qgna_         131 GITATVIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN--------  197 (398)
T ss_dssp             TCEEEEECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT--------
T ss_pred             cccccccccc-----chhhhhhhhccccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeecccc--------
Confidence            8888888632     333 34456678999999999999999999999999999999999999999764322        


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                       ..|+   ..|+|++..|..||..|-..  .|+ +..++++.......... .|+          ..  ....+|..++-
T Consensus       198 -~~Pl---~~GaDiVihS~TKy~~Ghsdv~~G~-v~~~~~~~~~~~~~~~~-~G~----------~l--~p~~a~ll~rg  259 (398)
T d1qgna_         198 -QKAL---ALGADLVLHSATKFLGGHNDVLAGC-ISGPLKLVSEIRNLHHI-LGG----------AL--NPNAAYLIIRG  259 (398)
T ss_dssp             -CCTT---TTTCSEEEECTTTTTTCSSSCCCEE-EEECHHHHHHHHHHHHH-HCC----------CC--CHHHHHHHHHH
T ss_pred             -CCch---hhCCCEEEEechhhcCcccceeehh-hcchhhhhhhhhhhccc-CCC----------cC--CHHHHHHHHhc
Confidence             1244   45899999999999665532  354 55665554332211111 111          11  11356766654


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHH---hcCCcc
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQ---NLSDLW  430 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~---~l~~l~  430 (435)
                      +  +.+.-|+++..+.+....+   .-+.+.
T Consensus       260 l--~TL~lRm~~~~~nA~~lA~~L~~hp~V~  288 (398)
T d1qgna_         260 M--KTLHLRVQQQNSTALRMAEILEAHPKVR  288 (398)
T ss_dssp             G--GGHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             c--hHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence            4  5566666666666555544   445543

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=5.2e-14  Score=134.95  Aligned_cols=225  Identities=15%  Similarity=0.089  Sum_probs=157.4

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHH--HcC
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AAN--YFG  246 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~--~~g  246 (435)
                      .+.++|.-+++...++||+... ++ =..+|+.|+..++.++.+++|.        |+..+..|.++..   ...  ...
T Consensus        69 ~iD~iE~la~~ra~~lF~a~~a-nV-qp~SGs~AN~av~~All~pGD~--------Il~l~l~~GGHlshg~~~~~~g~~  138 (416)
T d1dfoa_          69 YVDIVEQLAIDRAKELFGADYA-NV-QPHSGSQANFAVYTALLEPGDT--------VLGMNLAHGGHLTHGSPVNFSGKL  138 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSEE-EC-CCSSHHHHHHHHHHHHCCTTCE--------EEEECTTTTCCGGGTCTTSHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCcc-ee-ecccCccHHHHHHHHhcCCCCe--------eeeccccccccccccccccccCce
Confidence            3456677777788889988643 33 3467799999999999999988        8888876655322   111  223


Q ss_pred             CEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      .+.+..++++++.+|.+++++... .++++|++..-.+|  ..-|++++.++|++.|.++++|.+|-.++..-    |.-
T Consensus       139 ~~~~~y~~d~~~~IDyd~l~~~a~~~kPklIi~G~S~y~--r~~d~~~~reiad~vga~l~~D~aH~~GLIa~----g~~  212 (416)
T d1dfoa_         139 YNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLVAA----GVY  212 (416)
T ss_dssp             SEEEEECBCSSSSBCHHHHHHHHHHHCCSEEEEECSSCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH----TSS
T ss_pred             EEEEecccCCccCccHHHHHHHHHHhccceEEecccccc--cccCHHHHHHHHHhcCceEEcchhhhhcceec----ccc
Confidence            467778888888899999998775 48999988765443  55789999999999999999999998877642    322


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC--cccccc-ccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL--KYKHCQ-YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~--~~~~~~-~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                      ..|++    .+|+++.++||.+.||.| |++++++.  ++.+.. ....|.          +.|+.-...+|+...++..
T Consensus       213 ~sP~~----~aDvvt~tThKtlrGPrg-giI~~~~~~~~~~~~i~~avfPg----------~qggp~~~~iaa~Aval~E  277 (416)
T d1dfoa_         213 PNPVP----HAHVVTTTTHKTLAGPRG-GLILAKGGSEELYKKLNSAVFPG----------GQGGPLMHVIAGKAVALKE  277 (416)
T ss_dssp             CCCTT----TSSEEEEESSSTTCCCSC-EEEEESSCCHHHHHHHHHHHTTT----------TCSSCCHHHHHHHHHHHHH
T ss_pred             CCccc----ccceeeeehhhcccCCCc-eEEEeccchHhHHHHHHhhhCcc----------cccCccHHHHHHHHHHHHH
Confidence            23444    369999999999888886 88888753  332211 112233          3334444456666666776


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .-.+.+.+..+++.++++.+.+.|.
T Consensus       278 a~~~~fk~Y~~qvv~NA~~La~~L~  302 (416)
T d1dfoa_         278 AMEPEFKTYQQQVAKNAKAMVEVFL  302 (416)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666677777777777766666543

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=2.3e-14  Score=143.18  Aligned_cols=244  Identities=15%  Similarity=0.154  Sum_probs=152.8

Q ss_pred             ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCe-EEEeCCCchhHHHHHHHcCCE
Q psy10210        170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPE-IVLPTTAHPAFDKAANYFGMK  248 (435)
Q Consensus       170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~-viv~~~~~~~~~~~~~~~g~~  248 (435)
                      .|.+.++|    +.+++++|.+   .++++++||+|+..++++++.+++......+.. ++.+...|......+...|++
T Consensus        73 ~~~~~~le----~~~a~l~G~~---~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~G~~  145 (467)
T d2v1pa1          73 SRSYYALA----ESVKNIFGYQ---YTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCT  145 (467)
T ss_dssp             CHHHHHHH----HHHHHHTCCS---EEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCE
T ss_pred             CchHHHHH----HHHHHHHCCC---EEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHHHcCCe
Confidence            35555554    5678889875   568999999999999999999998744444333 455555666677788888999


Q ss_pred             EEEEecCC----------CccccHHHHHHHhhc----CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEecc
Q psy10210        249 VKHIRLTS----------SYTVDLAALQSAITG----NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCC  310 (435)
Q Consensus       249 v~~vp~~~----------~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~  310 (435)
                      ++.++.+.          .+.+|++++++.+.+    ++.++++...+|..|..    +++++|.++|++||+++|+|+|
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l~~D~a  225 (467)
T d2v1pa1         146 VRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSA  225 (467)
T ss_dssp             EEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred             eeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEEEEech
Confidence            98887642          357899999999863    46788888888766543    6899999999999999999999


Q ss_pred             ccchhhhcccc--cCCCCCCC-CC---CCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc---ccCCCCCCCCCC
Q psy10210        311 LGGFLAPFMSA--AGYPLPPF-DF---SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF---VTSDWPGGNYGS  381 (435)
Q Consensus       311 ~~~~~~~~~~~--~g~~~~~~-d~---~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~---~~~~~~gg~~~~  381 (435)
                      +......+...  .++..... +.   ....+|+++++.||.+.+|.| |+++.+++.+......   ......++    
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~g-g~i~~~~~~~~~~~~~~~~~~~~~~~~----  300 (467)
T d2v1pa1         226 RFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTECRTLCVVQEGF----  300 (467)
T ss_dssp             THHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHHHHHHHHTTSS----
T ss_pred             hhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCc-eeEEecchhhhhHHHhhcccccccccC----
Confidence            86543321111  01100000 00   012369999999999777654 6666666554321100   00111111    


Q ss_pred             CccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        382 PSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       382 ~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      ++. +.-+...+++....+.....+.+.++..++.+.+.+.+.+.
T Consensus       301 ~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  344 (467)
T d2v1pa1         301 PTY-GGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI  344 (467)
T ss_dssp             CCC-CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cch-hhhHHHHHHHHHHHhHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence            111 11222222233333444444566666666666666666653

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.54  E-value=1.5e-13  Score=132.85  Aligned_cols=216  Identities=15%  Similarity=0.111  Sum_probs=147.8

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHH
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAAN  243 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~  243 (435)
                      ...|....+|+    .++++-|+.   ..+.+++|..|+..++.++..+++.        |++++..|.+..    ....
T Consensus        56 ~~nPT~~~le~----~la~LEg~~---~a~~~sSGmaAi~~~~l~l~~~gd~--------vv~~~~~yg~t~~~~~~~~~  120 (394)
T d1e5ea_          56 LGNPTVSNLEG----KIAFLEKTE---ACVATSSGMGAIAATVLTILKAGDH--------LISDECLYGCTHALFEHALT  120 (394)
T ss_dssp             TCCHHHHHHHH----HHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEESCCCHHHHHHHHTHHH
T ss_pred             CCCHHHHHHHH----HHHHHhCCc---ceeeeccchHHHHHHHHhhcccccc--------cccccceeehhhHhHHHHhh
Confidence            33455555554    556666653   4688899999999999999888877        999999887743    4456


Q ss_pred             HcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH-cCCcEEEeccccchhhhccccc
Q psy10210        244 YFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK-YGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       244 ~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~-~~~~livD~~~~~~~~~~~~~~  322 (435)
                      .+|+++..++..     |.++++++++++|++|++..|.||+..+.|++++.+.+++ +|+++++|..++....      
T Consensus       121 ~~gi~~~~~d~~-----d~~~~~~~i~~~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~atP~~------  189 (394)
T d1e5ea_         121 KFGIQVDFINTA-----IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMI------  189 (394)
T ss_dssp             HTTCEEEEECTT-----STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTT------
T ss_pred             ccceeeeccCCC-----CHHHHHHhhcccccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCcccCccc------
Confidence            679999999753     6778999999999999999999999999999999887764 6899999999764332      


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAM  400 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l  400 (435)
                         ..|++   .|+|++..|..||+.|-..  .|+++.+++..............|+.          ..  .-.+|..+
T Consensus       190 ---~~Pl~---~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~----------ls--p~~a~ll~  251 (394)
T d1e5ea_         190 ---TNPVD---FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSV----------IS--PHDAWLIT  251 (394)
T ss_dssp             ---CCGGG---GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCC----------CC--HHHHHHHH
T ss_pred             ---CCchh---cCCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCC----------CC--hHHHHHHH
Confidence               22444   4899999999999655422  36655554433221111112222221          11  12556554


Q ss_pred             HHhcHHHHHHHHHHHHHHHHHHHH---hcCCc
Q psy10210        401 MYFGFEAQVWICVRYHFNYKSCLQ---NLSDL  429 (435)
Q Consensus       401 ~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l  429 (435)
                      +  |.+.+.-|+++..+++.+..+   +-+.+
T Consensus       252 r--gl~TL~lRm~r~~~nA~~lA~~L~~hp~V  281 (394)
T d1e5ea_         252 R--GLSTLNIRMKAESENAMKVAEYLKSHPAV  281 (394)
T ss_dssp             H--HHTTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             h--hchhHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence            4  445666667766666555544   44554

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=7.5e-14  Score=137.57  Aligned_cols=260  Identities=12%  Similarity=-0.013  Sum_probs=166.8

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI  223 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~  223 (435)
                      ++|++.+++++++.+..+....     ....+...++.+.+.+..+.+. +.+.++++|+||+..|++..+..... +|.
T Consensus        60 ~~p~i~~Ai~~q~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~-~~v~f~~sGseA~e~A~k~ar~~~~~-~g~  132 (429)
T d1s0aa_          60 NHPQLNAAMKSQIDAMSHVMFG-----GITHAPAIELCRKLVAMTPQPL-ECVFLADSGSVAVEVAMKMALQYWQA-KGE  132 (429)
T ss_dssp             SCHHHHHHHHHHHHHCSCCCCS-----SEECHHHHHHHHHHHHHSCTTC-CEEEEESSHHHHHHHHHHHHHHHHHH-HTC
T ss_pred             CcHHHHHHHHHHHHhcCCcccC-----CccchHHHHHHHHHHhhhccCc-ceeeeccccccchhhhhhhhhheeec-ccc
Confidence            5899999999998875432211     1222344556667777776544 47999999999999999999877665 666


Q ss_pred             CCCeEEEeCCCchhHHHHH-HHcCC-------------EEEEEecC---C---CccccHHHHHHHhh---cCceEEEEeC
Q psy10210        224 SLPEIVLPTTAHPAFDKAA-NYFGM-------------KVKHIRLT---S---SYTVDLAALQSAIT---GNTVMLVGSM  280 (435)
Q Consensus       224 ~~~~viv~~~~~~~~~~~~-~~~g~-------------~v~~vp~~---~---~~~~d~~~l~~~i~---~~~~~v~~~~  280 (435)
                      .+++|+....+|++....+ ...+.             .....|..   .   ....+++++++.+.   +++.+++++.
T Consensus       133 ~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEP  212 (429)
T d1s0aa_         133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEP  212 (429)
T ss_dssp             CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECS
T ss_pred             cccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhhhhhhhcCCccceeeecc
Confidence            6778888888877743333 22221             22333322   1   11234555555443   4677888776


Q ss_pred             CC-CCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCC-ccCC
Q psy10210        281 PN-FPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGF-TPKG  352 (435)
Q Consensus       281 p~-nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~-~p~g  352 (435)
                      .. +..|..    +.+++|.++|++||+++|+||++.||..        ....+.+...|+  |+++++  |.+. |...
T Consensus       213 i~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGR--------tG~~~~~~~~~v~PDi~~~g--K~l~gG~~p  282 (429)
T d1s0aa_         213 IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGR--------TGKLFACEHAEIAPDILCLG--KALTGGTMT  282 (429)
T ss_dssp             SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTT--------TSSSSGGGGGTCCCSEEEEC--GGGGTSSSC
T ss_pred             eeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccc--------cccccccccceecccccccc--ccccccccc
Confidence            54 433443    4599999999999999999999999833        222344444444  888887  6542 3355


Q ss_pred             cEEEEEeCCcccccccc--ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210        353 SSVVLYRDLKYKHCQYF--VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD  428 (435)
Q Consensus       353 ~g~il~~~~~~~~~~~~--~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~  428 (435)
                      .|+++.++ ++.+....  ...-+.+++|+..       ..+++++.++|+.+.++++.+++++..+.+++.++++.+
T Consensus       283 ~~av~~~~-~i~~~~~~~~~~~~~~~~T~~gn-------p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~  352 (429)
T d1s0aa_         283 LSATLTTR-EVAETISNGEAGCFMHGPTFMGN-------PLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD  352 (429)
T ss_dssp             CEEEEECH-HHHHHHHTSTTSSCSCCCTTTTC-------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG
T ss_pred             ccchhhHH-HHHhccCCCCCcceeecCCCCCC-------cccchhhhccccccccccccchhhHHHHHHHHHHHHhcc
Confidence            67756554 44322110  0111223333322       234478999999999999999999999999999887643

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.52  E-value=3.1e-14  Score=134.40  Aligned_cols=194  Identities=15%  Similarity=0.141  Sum_probs=130.3

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.++....  ...+      +..+...++++++++++|.+  ..+++|+|||+|+..++.+++..++.     
T Consensus        16 ~P~v~~A~~~a~~~~--~~~~------~~~~~~~~l~~~la~~~g~~--~~v~f~~sGt~An~~a~~~~~~~~~~-----   80 (345)
T d1v72a1          16 SPEVAQALVKHSSGQ--AGPY------GTDELTAQVKRKFCEIFERD--VEVFLVPTGTAANALCLSAMTPPWGN-----   80 (345)
T ss_dssp             CHHHHHHHHHTTSSC--CCST------TCSHHHHHHHHHHHHHHTSC--CEEEEESCHHHHHHHHHHTSCCTTEE-----
T ss_pred             CHHHHHHHHHHhccC--cccc------CCCHHHHHHHHHHHHHHCCC--cEEEECCchHHHHHHHHHHHHhcCCc-----
Confidence            788888887643211  1111      22356778889999999874  36899999999999999988776665     


Q ss_pred             CCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhcC------ce-EEEEeCCCCCcccc---cCH
Q psy10210        225 LPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITGN------TV-MLVGSMPNFPYGTM---DDI  291 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~------~~-~v~~~~p~nptG~~---~~i  291 (435)
                         +++....|.+....   ....+..+..++.+.++..+++.+++.+.+.      +. .++...+.++.|..   +++
T Consensus        81 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (345)
T d1v72a1          81 ---IYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEI  157 (345)
T ss_dssp             ---EEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHH
T ss_pred             ---cccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhcccccccccccceeeeeeccccccccccchhh
Confidence               78888887775433   3445777777777778889999999998753      22 33344444555544   778


Q ss_pred             HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCc
Q psy10210        292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK  362 (435)
Q Consensus       292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~  362 (435)
                      +++.++|++||+++|+|++++++....... +   ..........+.++.+.+|.+.  ...+........
T Consensus       158 ~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  222 (345)
T d1v72a1         158 EAIGDVCKSSSLGLHMDGSRFANALVSLGC-S---PAEMTWKAGVDALSFGATKNGV--LAAEAIVLFNTS  222 (345)
T ss_dssp             HHHHHHHHHTTCEEEEEETTHHHHHHHHTC-C---TTTTTGGGTCCEEEECCGGGTC--SSCEEEEESSGG
T ss_pred             hhHHHHHHhcCceeeecccccceecccccc-C---HHHhhccccccccccCcccccc--ccccccccchhh
Confidence            899999999999999999998876643211 1   1222333345677777777643  333444444443

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.51  E-value=7.4e-13  Score=129.46  Aligned_cols=262  Identities=14%  Similarity=0.050  Sum_probs=158.6

Q ss_pred             CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      ++..|.+...+++..   +++|++.+++.+.+.+....+..    +  ......++.+.++++.+.   +.+.++.+|++
T Consensus        37 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~---~~v~~~~sgs~  107 (404)
T d1z7da1          37 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRA----F--FSVPLGICERYLTNLLGY---DKVLMMNTGAE  107 (404)
T ss_dssp             TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTT----S--EEHHHHHHHHHHHHHHTC---SEEEEESSHHH
T ss_pred             CCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHhCCCcccc----c--chHHHHHHHHhhhhcccc---ceeeeeccccc
Confidence            344555444433332   24899999999988875433221    1  112223444556666654   36889999999


Q ss_pred             HHHHHHHHHHHHhhhhc-C-CCCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccccHHHHHHHh
Q psy10210        205 SIMMACKAYRDYAREEK-G-ISLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTVDLAALQSAI  269 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~-g-~~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~d~~~l~~~i  269 (435)
                      |+..+++..+..+.... + .....++.....|++........ +.            .+..+|     .-+.+.++..+
T Consensus       108 a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~  182 (404)
T d1z7da1         108 ANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVP-----YDDLEALEEEL  182 (404)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEEC-----TTCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccc-----cchHHHHHHHh
Confidence            99999999987765422 1 12345777777777644333222 11            111222     12567777777


Q ss_pred             hc-CceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEec
Q psy10210        270 TG-NTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVD  342 (435)
Q Consensus       270 ~~-~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s  342 (435)
                      .+ ++.+|++.......|.+.+    +++|.++|++||+++|+||++.||..        ....+.+...|+  |+++++
T Consensus       183 ~~~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgR--------tG~~~~~e~~gv~PDivt~g  254 (404)
T d1z7da1         183 KDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGR--------TGKLLCVHHYNVKPDVILLG  254 (404)
T ss_dssp             TSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT--------TSSSSGGGGGTCCCSEEEEC
T ss_pred             cCCCEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCc--------ccccccccccCCCCCEEEEc
Confidence            64 5788888877777787733    89999999999999999999998743        222444444444  888887


Q ss_pred             CCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210        343 THKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS  421 (435)
Q Consensus       343 ~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~  421 (435)
                        |.+.+. ..+|+++.++ ++.+..   .+...+++|.     |  +..+.+++.++++.+..+++.+++.+..+.+.+
T Consensus       255 --K~l~gG~~p~~~v~~~~-~i~~~~---~~~~~~~T~~-----g--npl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~  321 (404)
T d1z7da1         255 --KALSGGHYPISAVLAND-DIMLVI---KPGEHGSTYG-----G--NPLAASICVEALNVLINEKLCENAEKLGGPFLE  321 (404)
T ss_dssp             --GGGGTTSSCCEEEEECH-HHHTTC---CTTCCCCTTT-----T--CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             --ccccCCCCCcccccchH-HHHccC---CCCCcCcCCC-----C--CcchhhhhhhhhhhhhcchhhhhhccchhHHHH
Confidence              664333 4567756554 443321   2223333332     2  233447888899999888888888887776665


Q ss_pred             HHH
Q psy10210        422 CLQ  424 (435)
Q Consensus       422 ~~~  424 (435)
                      .+.
T Consensus       322 ~l~  324 (404)
T d1z7da1         322 NLK  324 (404)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.51  E-value=9.4e-14  Score=137.20  Aligned_cols=265  Identities=13%  Similarity=-0.009  Sum_probs=163.3

Q ss_pred             CCCCCCCCcccccccC---ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210        128 GHYDWKHGRVSGAVYY---YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE  204 (435)
Q Consensus       128 ~~~~~~~~~~~~~~~~---g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte  204 (435)
                      +++.|.+...++++..   ++|++.+++.+.+.+..+.+.      ....+...++.+.+++++...- +.+.++++|||
T Consensus        39 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~------~~~~~~~~~la~~L~~~~~~~~-~~v~f~~sGse  111 (431)
T d1zoda1          39 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFS------EMLSRPVVDLATRLANITPPGL-DRALLLSTGAE  111 (431)
T ss_dssp             TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCT------TCCCHHHHHHHHHHHHHSCTTC-CEEEEESCHHH
T ss_pred             CCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhcccccc------ccccHHHHHHHHHHHHhCCccc-ceeeecccccc
Confidence            4455555444433322   479999999999987543221      1123344567777888774333 48999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC------------CEEEEEecCCCc---------ccc--
Q psy10210        205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG------------MKVKHIRLTSSY---------TVD--  261 (435)
Q Consensus       205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g------------~~v~~vp~~~~~---------~~d--  261 (435)
                      |++.|++.++....      +++|+.....|++....+...+            .....++.....         ..+  
T Consensus       112 A~e~Alk~Ar~~t~------r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (431)
T d1zoda1         112 SNEAAIRMAKLVTG------KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLA  185 (431)
T ss_dssp             HHHHHHHHHHHHHT------CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHH
T ss_pred             hHHHHHHHHHHhcC------CcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhh
Confidence            99999999986643      3568888888887544443321            123334322110         112  


Q ss_pred             -HHHHHHHh----hcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210        262 -LAALQSAI----TGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS  332 (435)
Q Consensus       262 -~~~l~~~i----~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~  332 (435)
                       ++.+...+    .+++.+|+++......|.+    +.+++|.++|++||+++|.||++.||...     |   ..+...
T Consensus       186 ~~~~~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRt-----G---~~~~~~  257 (431)
T d1zoda1         186 ELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRT-----G---TMFACQ  257 (431)
T ss_dssp             HHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-----S---SSSTHH
T ss_pred             hHHHHHHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccc-----c---cccccc
Confidence             23333332    2367888888776656666    44999999999999999999999987431     2   233333


Q ss_pred             CCCc--cEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHH
Q psy10210        333 LPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV  409 (435)
Q Consensus       333 ~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~  409 (435)
                      ..|+  |+++++  |.+.+....+.++.+++.....   ....+ .+++++       ....+.+++.+++..+.++.+.
T Consensus       258 ~~gv~PDi~~~g--K~l~gG~p~~av~~~~~~~~~~---~~~~~~~~~T~~-------g~pl~~aaa~a~l~~i~~~~~~  325 (431)
T d1zoda1         258 RDGVTPDILTLS--KTLGAGLPLAAIVTSAAIEERA---HELGYLFYTTHV-------SDPLPAAVGLRVLDVVQRDGLV  325 (431)
T ss_dssp             HHTCCCSEEEEC--HHHHTTSSCEEEEECHHHHHHH---HHTTCCCCCTTT-------TCHHHHHHHHHHHHHHHHTTHH
T ss_pred             cCCCCcchhccc--cccccccccceeeeeecchhhh---hcccccccCCCC-------CCcchHHHHHHHHHHhhhhhhh
Confidence            3343  888888  7544444556656554332211   11222 222222       2233346888899999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy10210        410 WICVRYHFNYKSCLQN  425 (435)
Q Consensus       410 ~~~~~~~~~~~~~~~~  425 (435)
                      +++++..+.+.+.+++
T Consensus       326 ~~~~~~g~~l~~~l~~  341 (431)
T d1zoda1         326 ARANVMGDRLRRGLLD  341 (431)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhh
Confidence            9998888877766544

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=1.3e-13  Score=133.11  Aligned_cols=208  Identities=11%  Similarity=0.038  Sum_probs=146.2

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH----HcC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN----YFG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~----~~g  246 (435)
                      |....+|+    .++++-|+.   ..+.+++|..|+..++.++..+++.        |+++...|.+....++    .+|
T Consensus        58 Pt~~~le~----~la~LEg~~---~a~~~~SGMaAi~~~l~~l~~~Gd~--------iv~~~~~Yg~T~~l~~~~l~~~G  122 (391)
T d1cl1a_          58 LTHFSLQQ----AMCELEGGA---GCVLFPCGAAAVANSILAFIEQGDH--------VLMTNTAYEPSQDFCSKILSKLG  122 (391)
T ss_dssp             HHHHHHHH----HHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCE--------EEEETTSCHHHHHHHHHTGGGGT
T ss_pred             hhHHHHHH----HHHHHhCCc---cEEEeccccceeeehhhcccCCCCe--------EEEecccccchhhhhhhcccccc
Confidence            44555444    556666553   5788999999999999999888877        9999999999665544    458


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCC
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGY  324 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~  324 (435)
                      +++..++.     .|.++++++++++|++|++..|.||+..+.|+++++++|+++  |++++||..++....        
T Consensus       123 i~~~~~d~-----~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT~atP~~--------  189 (391)
T d1cl1a_         123 VTTSWFDP-----LIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL--------  189 (391)
T ss_dssp             CEEEEECT-----TCGGGGGGTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS--------
T ss_pred             cccccccC-----ccccccccccccccceeeecccCcccccccccHHHHHHHHhccCCcEEEEeccccchhh--------
Confidence            88888764     267888999999999999999999999999999999999875  999999999865332        


Q ss_pred             CCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210        325 PLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY  402 (435)
Q Consensus       325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~  402 (435)
                       ..|++   .|+|++..|..||+.|-..  .|+ ++.++++.......... .|+          ...  ...+|..++ 
T Consensus       190 -~~Pl~---~GaDivvhS~TKy~~GhsdvlgG~-vv~~~~~~~~~~~~~~~-~G~----------~~~--p~~a~ll~r-  250 (391)
T d1cl1a_         190 -FKALD---FGIDVSIQAATKYLVGHSDAMIGT-AVCNARCWEQLRENAYL-MGQ----------MVD--ADTAYITSR-  250 (391)
T ss_dssp             -SCGGG---GTCSEEEEETTTTTTCSSSCCCEE-EEECTTTHHHHHHHHHH-TTC----------CCC--HHHHHHHHH-
T ss_pred             -hcccc---cccceEEeecchhccccccccccc-eeccccccccchhhhhc-ccc----------cCC--chhhhhhhc-
Confidence             12444   4899999999999665432  355 45555544332211111 121          111  135665544 


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        403 FGFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       403 ~g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                       |.+.+..|+++..+.+.+..+.|
T Consensus       251 -gl~TL~lR~~~~~~nA~~vA~~L  273 (391)
T d1cl1a_         251 -GLRTLGVRLRQHHESSLKVAEWL  273 (391)
T ss_dssp             -HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHH
Confidence             45666677777766665555444

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.50  E-value=6.4e-15  Score=144.78  Aligned_cols=149  Identities=14%  Similarity=0.090  Sum_probs=108.9

Q ss_pred             CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCc
Q psy10210        194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNT  273 (435)
Q Consensus       194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~  273 (435)
                      ..|++++|++|++.+++.++...+....-.++++|+++.|.|+.|...++.++.+...+      ..|.+.+++++++++
T Consensus       124 ~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~------~~D~~~~~~~~~~~~  197 (425)
T d2hoxa1         124 RYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW------AGNAANYVNVSNPEQ  197 (425)
T ss_dssp             CEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE------EEEGGGGTTCSCGGG
T ss_pred             CEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCcc------CCCHHHHHhhCCCCc
Confidence            36999999999999999999643332111234569999999999999999998765444      457778888888899


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCC-CCccCC
Q psy10210        274 VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKY-GFTPKG  352 (435)
Q Consensus       274 ~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~-~~~p~g  352 (435)
                      +++++++||||||.+..       +..+++.+|.|++|.+..+        .  ++... ..-+++..|+.|. +.++..
T Consensus       198 ~ii~l~sPnNPtG~l~~-------~v~~~~~~I~DEaY~~~~f--------~--~~~~~-~~~~Ivl~S~SK~fglaGlR  259 (425)
T d2hoxa1         198 YIEMVTSPNNPEGLLRH-------AVIKGCKSIYDMVYYWPHY--------T--PIKYK-ADEDILLFTMSKFTGHSGSR  259 (425)
T ss_dssp             EEEEEESSCTTTCCCCC-------CSSTTCEEEEECTTCSTTT--------S--CCCSC-BCCSEEEEEHHHHTSCGGGC
T ss_pred             eEEEEECCCCCCcchhh-------hhhhCCEEEEeccccCccc--------c--chhhh-cCCeEEEEeCHHhccCcchh
Confidence            99999999999999821       2235899999999954221        1  12111 1236777888897 335577


Q ss_pred             cEEEEEeCCccccc
Q psy10210        353 SSVVLYRDLKYKHC  366 (435)
Q Consensus       353 ~g~il~~~~~~~~~  366 (435)
                      +|++++.++.+.+.
T Consensus       260 iGw~i~~~~~i~~~  273 (425)
T d2hoxa1         260 FGWALIKDESVYNN  273 (425)
T ss_dssp             CEEEEECCHHHHHH
T ss_pred             eeeEEeCCHHHHHH
Confidence            89988888776544

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.49  E-value=5.1e-13  Score=129.91  Aligned_cols=227  Identities=15%  Similarity=0.112  Sum_probs=158.7

Q ss_pred             hHHHHHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCC---chhHHH------
Q psy10210        172 GVCKMEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA---HPAFDK------  240 (435)
Q Consensus       172 ~~~~~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~---~~~~~~------  240 (435)
                      .+.++|..+++...++||+++..+.  +=..+|+.|+..++.++.+++|.        |+..+..   |.+...      
T Consensus        74 ~iD~iE~la~~ra~~lF~~~~~~~~anVqp~SGs~An~av~~all~pgD~--------im~~~l~~GGHlshg~~~~~~~  145 (470)
T d1rv3a_          74 HIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGR--------IMGLDLPDGGHLTHGFMTDKKK  145 (470)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCE--------EEEECGGGTCCGGGCCBCSSCB
T ss_pred             hHHHHHHHHHHHHHHHhCCChhhccccccccCCccHHHHHHHHhcCCCCe--------EeeeccccCCcccccccccCCC
Confidence            4567778888889999998754222  33468899999999999999988        8776653   333210      


Q ss_pred             -HHHHcCCEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhh
Q psy10210        241 -AANYFGMKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP  317 (435)
Q Consensus       241 -~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~  317 (435)
                       .+.....+...++++ +++.+|.+++++...+ ++++|++-.-.+|  ..-|++++.++|++.|.++++|.+|-.++..
T Consensus       146 ~~~~~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~kPklIi~G~S~y~--r~~d~~~~reIad~vga~l~~D~aH~aGLIA  223 (470)
T d1rv3a_         146 ISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCYS--RNLDYGRLRKIADENGAYLMADMAHISGLVV  223 (470)
T ss_dssp             CSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHH
T ss_pred             cccccceeEeeEEEEecccCcccHHHHHHHHHhhCcceEeechhhcc--ccCCHHHHHHHHhccCCeEEecchhhhhhcc
Confidence             111123578888988 6689999999998764 8999987766554  3469999999999999999999999877764


Q ss_pred             cccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCc--------------ccccc-ccccCCCCCCCCCCC
Q psy10210        318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLK--------------YKHCQ-YFVTSDWPGGNYGSP  382 (435)
Q Consensus       318 ~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~--------------~~~~~-~~~~~~~~gg~~~~~  382 (435)
                          .|.-..|++    .+|+++.++||.+.||.| |+|++++..              +.+.. ....|          
T Consensus       224 ----~g~~~sPl~----~aDvvt~tTHKtlrGPrg-GiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFP----------  284 (470)
T d1rv3a_         224 ----AGVVPSPFE----HCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFP----------  284 (470)
T ss_dssp             ----HTSSCCGGG----TCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCHHHHHHHHHTT----------
T ss_pred             ----ccccCChhh----eeeeeeeehhhhccCCcc-eEEEEccccccccccccchhHHHHHHHHhhhcCc----------
Confidence                233233543    469999999999889987 888888641              11110 01112          


Q ss_pred             ccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        383 SVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       383 ~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      .++|+.-...+|+...+++......+.+..+++.++++.+.+.|.
T Consensus       285 g~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~La~~L~  329 (470)
T d1rv3a_         285 GLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALV  329 (470)
T ss_dssp             TTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence            233444445566665666666566677888888777777766553

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.48  E-value=3.9e-13  Score=130.30  Aligned_cols=226  Identities=14%  Similarity=0.121  Sum_probs=148.1

Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH---H-----HHH
Q psy10210        173 VCKMEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---D-----KAA  242 (435)
Q Consensus       173 ~~~~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~---~-----~~~  242 (435)
                      +.++|..+++...++||++...+.  +=..+|+.|+..++.++.+++|+        |+..+..+.++   .     ...
T Consensus        71 iD~iE~la~~ra~~lF~~~~a~w~vNVqp~SGs~An~av~~all~pgD~--------Im~l~l~~GGHlshg~~~~~~~~  142 (463)
T d2a7va1          71 VDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR--------IMGLDLPDGGHLTHGYMSDVKRI  142 (463)
T ss_dssp             CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEE--------CCC--------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCchhccCCccccccHHHHHHHHHHHcCCCce--------EEeeccCcCcccccccccccccc
Confidence            457888888899999999876432  34467899999999999999987        66555443332   2     112


Q ss_pred             HHcCC--EEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhc
Q psy10210        243 NYFGM--KVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPF  318 (435)
Q Consensus       243 ~~~g~--~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~  318 (435)
                      ...|.  +...++++ +++.+|.+++++...+ ++++|++-.-.+|  ..-|++++.++|++.|.++++|.+|-.++.. 
T Consensus       143 ~~~g~~~~~~~Y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~S~y~--r~~d~~~~reIad~vga~l~~D~aH~aGLIA-  219 (463)
T d2a7va1         143 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVA-  219 (463)
T ss_dssp             -----------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHH-
T ss_pred             cceeeEeeeeeeeccCCCCcCcHHHHHHHHhhcCCceEEecccccc--cccCHHHHHHHhhcccceEEechhhhhHHhh-
Confidence            22233  34444556 6788999999998764 8999987766554  3469999999999999999999999887774 


Q ss_pred             ccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC--------------cccccc-ccccCCCCCCCCCCCc
Q psy10210        319 MSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL--------------KYKHCQ-YFVTSDWPGGNYGSPS  383 (435)
Q Consensus       319 ~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~--------------~~~~~~-~~~~~~~~gg~~~~~~  383 (435)
                         .|.-..|++    .+|+++.++||++.||.| |+|++++.              ++.+.. ....|          .
T Consensus       220 ---~g~~~sP~~----~aDvvt~tTHKTlrGPrg-GiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFP----------g  281 (463)
T d2a7va1         220 ---AKVIPSPFK----HADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFP----------S  281 (463)
T ss_dssp             ---TTSSCCGGG----TCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTT----------T
T ss_pred             ---hhhhcChhh----hhhhhhchhhhhhcCCCc-eEEEEcccccccccccCccchhHHHHHhhhhcCc----------c
Confidence               233223443    479999999999888886 88888874              111110 01122          2


Q ss_pred             cccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        384 VSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       384 ~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +.|+.-...+|+...++.......+.+..+++.++++.+.+.|.
T Consensus       282 ~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~  325 (463)
T d2a7va1         282 LQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL  325 (463)
T ss_dssp             TCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            34444555565655566665556677777777777777666553

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=5.2e-14  Score=134.82  Aligned_cols=197  Identities=9%  Similarity=-0.142  Sum_probs=135.7

Q ss_pred             hHhHHHHHHHHHHhhcCCCCC---CCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPL---HPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK  221 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~---~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~  221 (435)
                      ++++.+++.+.+..+...+..   -.+.++.+.++..++++.+++++|.+++..+++++|++++...++.......+.  
T Consensus        13 p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a~~~~~~~~~~--   90 (360)
T d1bjna_          13 PAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKT--   90 (360)
T ss_dssp             CHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCTTCC--
T ss_pred             CHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhhhhhccccccc--
Confidence            556666666555443222111   123578888999999999999999987768899988888877776554333222  


Q ss_pred             CCCCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210        222 GISLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE  299 (435)
Q Consensus       222 g~~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~  299 (435)
                           .+++....+..  +...++..|..++.+..+.+...+.+.+++.+..+++++++.+.+|.||+..+++++.  ++
T Consensus        91 -----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~~~~i~--~~  163 (360)
T d1bjna_          91 -----TADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETP--DF  163 (360)
T ss_dssp             -----EEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEECCCCC--CC
T ss_pred             -----ccceecccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhccCCceeEEEecccccccCcccccee--cc
Confidence                 35555544444  4455566677776666554455667777777788888888888899999886666553  56


Q ss_pred             HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210        300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY  363 (435)
Q Consensus       300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~  363 (435)
                      .+++.+++|++.+..             ..++...++|+..+++||+.++|.|.+++++.+...
T Consensus       164 ~~~~~v~vDa~~~~~-------------~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~  214 (360)
T d1bjna_         164 GADVVVAADFSSTIL-------------SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLG  214 (360)
T ss_dssp             CTTCCEEEECTTTTT-------------SSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCS
T ss_pred             cccceeeeeeecccc-------------ceeeeeccceeEEEEcccccccCCCceeEeeehhhh
Confidence            789999999987532             234444568999999999988888877766665443

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.42  E-value=5.7e-13  Score=128.61  Aligned_cols=208  Identities=15%  Similarity=0.102  Sum_probs=141.1

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----cC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----FG  246 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----~g  246 (435)
                      |....+|.    .++.+-|+.   ..+++++|..|+..++ ++..+++.        |+++...|.+....+..    +|
T Consensus        55 PT~~~lE~----~la~LE~~~---~a~~~sSGmaAi~~~l-~~l~~gd~--------iv~~~~~yg~t~~~~~~~l~~~g  118 (393)
T d1n8pa_          55 PNRENLER----AVAALENAQ---YGLAFSSGSATTATIL-QSLPQGSH--------AVSIGDVYGGTHRYFTKVANAHG  118 (393)
T ss_dssp             HHHHHHHH----HHHHHTTCS---EEEEESCHHHHHHHHH-HTSCSSCE--------EEEESSCCHHHHHHHHHTSTTTC
T ss_pred             hHHHHHHH----HHHHHhCCc---eEEEecCchhHHHhhh-hcccCCCe--------eeeeeeecccchhhhhhhhhccc
Confidence            44555444    556666553   4577788888886554 55555655        99999999886655544    47


Q ss_pred             CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH----HcCCcEEEeccccchhhhccccc
Q psy10210        247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE----KYGIPVHVDCCLGGFLAPFMSAA  322 (435)
Q Consensus       247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~----~~~~~livD~~~~~~~~~~~~~~  322 (435)
                      +++..++      .+.++++++++++|++|++..|.||+..+.|+++|+++|+    ++|++++||..++....      
T Consensus       119 i~~~~~~------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~------  186 (393)
T d1n8pa_         119 VETSFTN------DLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYI------  186 (393)
T ss_dssp             SCCEEES------SHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHH------
T ss_pred             ceeEEee------cchHHHHHHhhhhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCccc------
Confidence            7776664      2457899999999999999999999999999999999999    67899999999876543      


Q ss_pred             CCCCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHH
Q psy10210        323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAM  400 (435)
Q Consensus       323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l  400 (435)
                         ..|+++   |+|++..|..||+.|-..  .|+++.+++++.+..... ....|+.          ..  ...+|..+
T Consensus       187 ---~~Pl~~---GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~-~~~~G~~----------~~--p~~a~ll~  247 (393)
T d1n8pa_         187 ---SNPLNF---GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFL-QNAIGAI----------PS--PFDAWLTH  247 (393)
T ss_dssp             ---CCGGGG---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHH-HHHHCCC----------CC--HHHHHHHH
T ss_pred             ---CCchhh---CCCEEEEccccccCCCCccccceeeecchhHHHHHHHH-HhhcCCC----------CC--hHHHHHHH
Confidence               124544   899999999999655422  366555655544322111 1111211          11  12566555


Q ss_pred             HHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210        401 MYFGFEAQVWICVRYHFNYKSCLQNLS  427 (435)
Q Consensus       401 ~~~g~~g~~~~~~~~~~~~~~~~~~l~  427 (435)
                      +-  .+.+..|+++..+.+.+..+.|+
T Consensus       248 rg--l~Tl~lR~~~~~~nA~~lA~~L~  272 (393)
T d1n8pa_         248 RG--LKTLHLRVRQAALSANKIAEFLA  272 (393)
T ss_dssp             HH--HTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             hC--CcchhhHHHHHHHHHHHHHHHHH
Confidence            44  46667777777777766666553

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.42  E-value=4.7e-13  Score=128.73  Aligned_cols=194  Identities=13%  Similarity=0.055  Sum_probs=129.5

Q ss_pred             hHhHHHHHHHHHHhhcCCCC-C--CCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHH-HHHHHhhhh
Q psy10210        145 QQDLVDLLTEVFGLTSYTNP-L--HPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACK-AYRDYAREE  220 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~-~--~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~-a~~~~~~~~  220 (435)
                      ++++++++++.+..+.+.+. .  -.+.++.+.++..++++.+++++|.+++..+++++|++.+...++. .+..+++. 
T Consensus        15 p~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea~~~~l~~~~~~-   93 (361)
T d2c0ra1          15 PLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQT-   93 (361)
T ss_dssp             CHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCE-
T ss_pred             CHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHhccccCCCc-
Confidence            45566666554433221111 1  1134688899999999999999999877678888777766655544 33333332 


Q ss_pred             cCCCCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210        221 KGISLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG  298 (435)
Q Consensus       221 ~g~~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la  298 (435)
                             +++....+..  +...++..|..+..++.+....++++.+++.+..++.. .   .+|.||...++++|.++|
T Consensus        94 -------~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---v~~~tg~~~~~~~i~~~~  162 (361)
T d2c0ra1          94 -------ANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAA-Y---LHLTSNETIEGAQFKAFP  162 (361)
T ss_dssp             -------EEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEE-E---EEEESEETTTTEECSSCC
T ss_pred             -------eEEEeechhhhhhhhhhhhcCceeeeeccccccccchhhhhhhcccCcce-E---EEEecccceecceEEEee
Confidence                   5444433333  66778888999999988766677888888776655532 2   345689999999999999


Q ss_pred             HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210        299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK  364 (435)
Q Consensus       299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~  364 (435)
                      +++|+++++|++++.+           +.++|+...++|  .++++|.++ |.|.+++++..+.+.
T Consensus       163 ~~~~al~~vDavss~g-----------~~~id~~~~di~--~~s~~k~~~-~~~~~~~~~~~~~~~  214 (361)
T d2c0ra1         163 DTGSVPLIGDMSSDIL-----------SRPFDLNQFGLV--YAGAQKNLG-PSGVTVVIVREDLVA  214 (361)
T ss_dssp             CCTTSCEEEECTTTTT-----------SSCCCGGGCSEE--EEETTTTTC-CSSCEEEEEEGGGSS
T ss_pred             ccCCceEEEEeecccc-----------ccccccccceeE--EEecccccc-cccCcEEEEEhHHhh
Confidence            9999999999998543           336777665555  556788854 444444455555443

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.41  E-value=2.1e-12  Score=128.20  Aligned_cols=255  Identities=12%  Similarity=-0.006  Sum_probs=151.2

Q ss_pred             ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh---
Q psy10210        144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE---  220 (435)
Q Consensus       144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~---  220 (435)
                      ++|++.+++.+........+.......+ ...+.+++.+.+.++.+.+- +.++++++|+||+..|++.++.+...+   
T Consensus        70 ~~p~v~~ai~~q~~~~~~~~~~~~~~~~-~~~~a~~lae~l~~~~~~~~-~~v~f~~sGseAve~Aik~Ar~~~~~~~~~  147 (461)
T d1ohwa_          70 SHPALVKLVQQPQNVSTFINRPALGILP-PENFVEKLRESLLSVAPKGM-SQLITMACGSCSNENAFKTIFMWYRSKERG  147 (461)
T ss_dssp             TCHHHHHHHHCGGGHHHHHCCCCTTTSC-BTTHHHHHHHTGGGGCCTTC-CEEEEESSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHhhhhhcccccccccc-hHHHHHHHHHHHHhhhccCc-ceeeeecchhhhhHHHHHHHHHHhhhcccC
Confidence            4899999998776543222211111111 11123344555555554433 489999999999999999987653321   


Q ss_pred             -----------------cCCCCCeEEEeCCCchhHHHHHHH-cCC-----------EEEEEecCC-C-------------
Q psy10210        221 -----------------KGISLPEIVLPTTAHPAFDKAANY-FGM-----------KVKHIRLTS-S-------------  257 (435)
Q Consensus       221 -----------------~g~~~~~viv~~~~~~~~~~~~~~-~g~-----------~v~~vp~~~-~-------------  257 (435)
                                       .|..+..||....+|++....+.. .|-           .....|... .             
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (461)
T d1ohwa_         148 QSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQE  227 (461)
T ss_dssp             TCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEECCCCCCSSGGGCHHHHHHH
T ss_pred             cccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCcccccccccccccccccccchh
Confidence                             233456788888888874333322 221           111122110 0             


Q ss_pred             ccccHHHHHHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210        258 YTVDLAALQSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP  327 (435)
Q Consensus       258 ~~~d~~~l~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~  327 (435)
                      ...+.+++++.+.      +++.+|+++..+...|.+    +.+++|.++|++||+++|+||++.||..     .|   .
T Consensus       228 ~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~gR-----tG---~  299 (461)
T d1ohwa_         228 EARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGS-----TG---K  299 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTCSST-----TS---S
T ss_pred             hhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceecccccccccc-----cc---c
Confidence            0123445555542      457888888877767766    5599999999999999999999998743     22   2


Q ss_pred             CCCCCCCC----ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210        328 PFDFSLPG----VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF  403 (435)
Q Consensus       328 ~~d~~~~g----vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~  403 (435)
                      .+.+...|    .|+++++  |.+    +.|.+.. ...+...    .+...+++|     .+  .....+++.++|+.+
T Consensus       300 ~~~~e~~gi~~~PDiv~~g--K~l----~~g~~~~-~~~~~~~----~~~~~~~T~-----~g--~p~~~aaa~a~l~~i  361 (461)
T d1ohwa_         300 FWAHEHWGLDDPADVMTFS--KKM----MTGGFFH-KEEFRPN----APYRIFNTW-----LG--DPSKNLLLAEVINII  361 (461)
T ss_dssp             SSGGGGGCCSSCCSEEEEC--GGG----SSEEEEE-CGGGSCS----STTSSCCSC-----SS--CHHHHHHHHHHHHHH
T ss_pred             cccccccccccCchhhhhh--hcc----ccccccc-ccccccc----ccccccccc-----cc--ccccchhhcccchhh
Confidence            34443333    4888777  653    2244333 2222211    122223322     22  223446888999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhc
Q psy10210        404 GFEAQVWICVRYHFNYKSCLQNL  426 (435)
Q Consensus       404 g~~g~~~~~~~~~~~~~~~~~~l  426 (435)
                      .++++.+++++..+++.+.++++
T Consensus       362 ~~~~l~~~~~~~g~~l~~~l~~l  384 (461)
T d1ohwa_         362 KREDLLSNAAHAGKVLLTGLLDL  384 (461)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999998888877776654

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.39  E-value=2.4e-13  Score=130.59  Aligned_cols=168  Identities=7%  Similarity=-0.070  Sum_probs=116.0

Q ss_pred             CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHc
Q psy10210        168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYF  245 (435)
Q Consensus       168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~  245 (435)
                      +.++.+.++..++++.+++++|.+++..+++++|+++++..+........+.       .+++....+.+  +...++..
T Consensus        41 HRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~~~~~~~~~~~~~-------~v~~~~~g~~~~~~~~~~~~~  113 (360)
T d1w23a_          41 HRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGT-------IGNYVLTGSWSEKALKEAKLL  113 (360)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTC-------EEEEEECSHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhhhcccCc-------ccceeeccchhhhhHHHHHHh
Confidence            3477888999999999999999988777899999888887776665433322       35555554444  44445555


Q ss_pred             CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210        246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP  325 (435)
Q Consensus       246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~  325 (435)
                      +...+..........+++++++.....+ .   .+.+|.||.+.++++|.++|+++|+++++|++++.           +
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~tg~~~~~~~i~~~~~~~g~l~ivDavqs~-----------g  178 (360)
T d1w23a_         114 GETHIAASTKANSYQSIPDFSEFQLNEN-D---AYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDI-----------L  178 (360)
T ss_dssp             SEEEEEEECGGGTSCSCCCGGGCCCCTT-E---EEEEEESEETTTTEECSSCCCCCSSCEEEECTTTT-----------T
T ss_pred             hhcceeeccccccccchhhhhhcccccc-c---ceeEecCCccccceeeeeccccceeeEEeeccccc-----------c
Confidence            6666665543222234444443333222 2   33455689999999999999999999999999854           3


Q ss_pred             CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEe
Q psy10210        326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYR  359 (435)
Q Consensus       326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~  359 (435)
                      +.++|+...++|+++++.||+  .|.|.|+++.+
T Consensus       179 ~~~id~~~~~vd~~~~~~~k~--~~~~~~~~~~~  210 (360)
T d1w23a_         179 SRPLKVNQFGMIYAGAQKNLG--PSGVTVVIVKK  210 (360)
T ss_dssp             SSCCCGGGCSEEEEETTTTTS--CTTCEEEEEEH
T ss_pred             ccccccccccceEEeeccccc--cCCcceeeEec
Confidence            448899899999999998886  33445554443

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.35  E-value=3.5e-12  Score=118.75  Aligned_cols=181  Identities=13%  Similarity=0.065  Sum_probs=112.9

Q ss_pred             hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210        145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS  224 (435)
Q Consensus       145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~  224 (435)
                      +|++.+++.+......  ..+      +..+...++++.+++++|.+++ ++++|+|||||+.+++.++..+++.     
T Consensus        13 ~P~v~eAl~~~~~~~~--~~y------~~~~~~~~lr~~ia~~~g~~~~-~v~~tsggtean~~a~~~~~~~~~~-----   78 (340)
T d1svva_          13 HPKILDLMARDNMTQH--AGY------GQDSHCAKAARLIGELLERPDA-DVHFISGGTQTNLIACSLALRPWEA-----   78 (340)
T ss_dssp             CHHHHHHHHHHTTCCC--CST------TCSHHHHHHHHHHHHHHTCTTS-EEEEESCHHHHHHHHHHHHCCTTEE-----
T ss_pred             CHHHHHHHHHHhhcCC--CCC------CCCHHHHHHHHHHHHHhCCCcc-eEEEcCCHHHHHHHHHHHHhhhccc-----
Confidence            6778888776533211  111      1235567889999999999865 8999999999999999998877776     


Q ss_pred             CCeEEEeCCCchhHHHHHHHc--CCEEEEEecCCCccccHHHHHHHhhc-------CceEEEEeCCCCCcccc--cCHHH
Q psy10210        225 LPEIVLPTTAHPAFDKAANYF--GMKVKHIRLTSSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGTM--DDIGA  293 (435)
Q Consensus       225 ~~~viv~~~~~~~~~~~~~~~--g~~v~~vp~~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~~--~~i~~  293 (435)
                         +++..+.|.++.......  +.....++... ...+.+...++...       ++..+++..++++.+..  +++..
T Consensus        79 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (340)
T d1svva_          79 ---VIATQLGHISTHETGAIEATGHKVVTAPCPD-GKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELED  154 (340)
T ss_dssp             ---EEEETTSHHHHSSTTHHHHTTCCEEEECCTT-SCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHH
T ss_pred             ---cccccccceeeeecccccccceeeeeccccc-ccccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhh
Confidence               888888888865433333  33333333322 22333333333221       23445555555544443  67888


Q ss_pred             HHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC
Q psy10210        294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG  347 (435)
Q Consensus       294 i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~  347 (435)
                      +.+.|+++|.++|+|+++.+........    ....+......+....+..|.+
T Consensus       155 ~~~~~~~~g~~~~~d~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  204 (340)
T d1svva_         155 ISASCKEHGLYLFLDGARLASALSSPVN----DLTLADIARLTDMFYIGATKAG  204 (340)
T ss_dssp             HHHHHHHHTCEEEEECTTHHHHHTSTTC----CCCHHHHHHHCSEEEEECTTTT
T ss_pred             hhcccccccceeeeeccceeeeeccccc----ccccccccccceeeecCCcccc
Confidence            8999999999999999998776642211    0111111122366677777764

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.29  E-value=1.8e-12  Score=122.15  Aligned_cols=166  Identities=20%  Similarity=0.198  Sum_probs=112.1

Q ss_pred             hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCC
Q psy10210        171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYFGM  247 (435)
Q Consensus       171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~  247 (435)
                      |.+.++|    +.+|+++|.+   .+++++|||+|+.+++++++.+++.        +++..+.|.++..   .+...+.
T Consensus        34 p~~~~le----~~lA~~~G~~---~~~~~~sGt~A~~~al~a~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~   98 (343)
T d1m6sa_          34 PTINELE----RLAAETFGKE---AALFVPSGTMGNQVSIMAHTQRGDE--------VILEADSHIFWYEVGAMAVLSGV   98 (343)
T ss_dssp             HHHHHHH----HHHHHHTTCS---EEEEESCHHHHHHHHHHHHCCTTCE--------EEEETTCHHHHSSTTHHHHHTCC
T ss_pred             HHHHHHH----HHHHHHHCCC---eEEEeCCHHHHHHHHHHHHhccCCc--------eeccccccceeeecccccccccc
Confidence            5555555    4667888864   5788899999999999999888776        8989988877543   3334455


Q ss_pred             EEEEEecCCCccccHHHHHHHhhcC------ce-EEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhh
Q psy10210        248 KVKHIRLTSSYTVDLAALQSAITGN------TV-MLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAP  317 (435)
Q Consensus       248 ~v~~vp~~~~~~~d~~~l~~~i~~~------~~-~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~  317 (435)
                      .++.++. ..+..|++.+++.+...      +. +++...++++.|.+   +++++|.++|++||+++++|++++++...
T Consensus        99 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~  177 (343)
T d1m6sa_          99 MPHPVPG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASI  177 (343)
T ss_dssp             EEEEECE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHH
T ss_pred             eeecccc-ccCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHHHHHhcCeEEEecccccccccc
Confidence            6666654 34567999999998743      34 44445667777776   56778888889999999999999987764


Q ss_pred             cccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEe
Q psy10210        318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYR  359 (435)
Q Consensus       318 ~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~  359 (435)
                      ..   +.   .........+..+++.+|.+.+.. .+.+...
T Consensus       178 ~~---~~---~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~  212 (343)
T d1m6sa_         178 AS---GV---PVKEYAGYADSVMFCLSKGLCAPV-GSVVVGD  212 (343)
T ss_dssp             HH---CC---CHHHHHHTCSEEEEESSSTTCCSS-CEEEEEC
T ss_pred             cc---cc---chhhhccccccccccccccccccc-ccccccc
Confidence            21   10   111111224666777777654444 3443433