Psyllid ID: psy10348

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
Secondary Structure (PSIPRED)
cccccEEEEEEccccEEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEEccccEEEEEEccccccEEEEEEccccEEEEEcccccEEEEEcccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEEEEEEccccccccccccccEEEEEEEcccccccEEEEEEccccEEEEEcccEEEEEcccccccccccccccccEEEEEEEcccccEEEEEEEccccccEEEEEcccccEEEEEccccccccccEEEEcccccEEcEEEEEEcccccEEEc
Secondary Structure Prediction (SSPRO)
cccccEEEEccccccEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEccccccEEEEEccccEEEEEEcccccEEEEEcccccccccEEEEEEcccccEEEEcccccEEEEEEccccccccccEEEEEEcccccEEEcccccccEEEEEccccccccEEEEEEcccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEccccccEEEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEEcccccccccEEEEEEcccccEEEc
Coil and Loop (DISEMBL)
MSTRYSLLIEENFYTCAwsmdlesgrpllavagsraVIRIFSPAFHACVRHFyghghainelkfhpqdfNLLLSVSKDHTLRLWNIKTDICIAifggveghrdevlsADFDLLGTKIMscgmdhslklwdltkpeikdacaesytfnparstrpfdtqkehfpqfstrdiHRNYVDCVRWLGDfvlskscenciicwkpgrledkelrtnetnvtiinrlnfkdceIWFIRFSMDYWQKILAVGnqsgrtyvwdldvqdpssikfqilshprcmSAVRQTTlskngnvllc
Flexible Loop (DISEMBL)
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYtfnparstrpfdtqkehfpqfstrdihRNYVDCVRWLGDFVLSKSCENCIIcwkpgrledkelrtnetnvtiinrlnfkdcEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAvrqttlskngnvllc
Low Complexity Region (SEG)
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
Disordered region (IsUnstruct)
****YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN**************FPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAV**************
Disordered Region (DISOPRED)
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
Disordered Region (DISEMBL)
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
Disordered Region (DISPRO)
***RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q6AZS2	438	Polycomb protein eed-B OS	N/A	N/A	0.969	0.643	0.640	1e-115
Q8UUP2	438	Polycomb protein eed-A OS	N/A	N/A	0.969	0.643	0.637	1e-114
Q28DT7	438	Polycomb protein eed OS=X	yes	N/A	0.969	0.643	0.637	1e-114
Q5ZKH3	446	Polycomb protein EED OS=G	yes	N/A	0.969	0.632	0.630	1e-114
Q566T0	443	Polycomb protein eed OS=D	yes	N/A	0.965	0.634	0.653	1e-113
Q921E6	441	Polycomb protein EED OS=M	yes	N/A	0.969	0.639	0.630	1e-113
O75530	441	Polycomb protein EED OS=H	yes	N/A	0.969	0.639	0.630	1e-113
Q3SZ25	441	Polycomb protein EED OS=B	yes	N/A	0.969	0.639	0.630	1e-113
O16023	428	Polycomb protein esc OS=M	N/A	N/A	0.965	0.656	0.597	4e-99
Q24338	425	Polycomb protein esc OS=D	no	N/A	0.965	0.661	0.547	3e-92

>sp|Q6AZS2|EEDB_XENLA Polycomb protein eed-B OS=Xenopus laevis GN=eed-b PE=1 SV=2

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 182/284 (64%), Positives = 232/284 (81%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    +K A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 261 RINSLRMKTAIKESYDYNPNKTNRPFVSQKVHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED  ++++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 321 CENAIVCWKPGKMEDDIEKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+V+DP   K   L++P+C SA+RQT+ S++ +VL+ 
Sbjct: 381 GKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSVLIA 424

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene (By similarity). May play a role in neural induction.
Xenopus laevis (taxid: 8355)

>sp|Q8UUP2|EEDA_XENLA Polycomb protein eed-A OS=Xenopus laevis GN=eed-a PE=1 SV=1

 Score =  411 bits (1057), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 181/284 (63%), Positives = 231/284 (81%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    +K A  ESY +NP+++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 261 RINSLRMKTAIKESYEYNPSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 321 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+ +DP   K   L++P+C SAVRQT+ S++ ++L+ 
Sbjct: 381 GKLYVWDLEAEDPHKAKCTTLTYPKCASAVRQTSFSRDSSILVA 424

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Xenopus laevis (taxid: 8355)

>sp|Q28DT7|EED_XENTR Polycomb protein eed OS=Xenopus tropicalis GN=eed PE=2 SV=1

 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 181/284 (63%), Positives = 231/284 (81%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    +K A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 261 RINSLRMKTAIRESYEYNPNKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 321 CENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+V+DP   K   L++P+C SA+RQT+ S++ ++L+ 
Sbjct: 381 GKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSILVA 424

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Xenopus tropicalis (taxid: 8364)

>sp|Q5ZKH3|EED_CHICK Polycomb protein EED OS=Gallus gallus GN=EED PE=2 SV=1

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 179/284 (63%), Positives = 232/284 (81%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 149 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 208

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 209 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 268

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 269 RINSKRMINAIKESYEYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 328

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 329 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 388

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+++DP   K   L+HP+C++A+RQT+ S++ ++L+ 
Sbjct: 389 GKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILIA 432

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Gallus gallus (taxid: 9031)

>sp|Q566T0|EED_DANRE Polycomb protein eed OS=Danio rerio GN=eed PE=2 SV=2

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 185/283 (65%), Positives = 228/283 (80%), Gaps = 2/283 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  S  PLLAVAGSR +IRI +     CV+H+ GHG+AINELKFHP+D 
Sbjct: 146 DENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAINELKFHPRDP 205

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSADFDLLG KIMSCGMDHSLKLW
Sbjct: 206 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADFDLLGEKIMSCGMDHSLKLW 265

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L    ++ A   SY +NP+++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 266 RLDSERLQRAIRGSYEYNPSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 325

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPGR+ED    ++ NE+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 326 CENAIVCWKPGRMEDDIDRIKPNESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 385

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVWDL+V+DP   K   L+ PRC SA+RQT+ S++ ++L+
Sbjct: 386 GKLYVWDLEVEDPHKAKCTTLTLPRCTSAIRQTSFSRDSSILI 428

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Danio rerio (taxid: 7955)

>sp|Q921E6|EED_MOUSE Polycomb protein EED OS=Mus musculus GN=Eed PE=1 SV=1

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/284 (63%), Positives = 230/284 (80%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+ 
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA 427

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene (By similarity). The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems (By similarity). Genes repressed by the PRC2/EED-EZH2 complex include HOXA7, HOXB6 and HOXC8. Plays a role in X chromosome inactivation (XCI), in which one of the two X chromosomes in female mammals is transcriptionally silenced to equalize X-linked gene dosage with XY males. Required for stable maintenance of XCI in both embryonic and extraembryonic tissues. May prevent transcriptional activation of facultative heterochromatin during differentiation. Required for development of secondary trophoblast giant cells during placental development. May regulate hippocampal synaptic plasticity in the developing brain.

Mus musculus (taxid: 10090)

>sp|O75530|EED_HUMAN Polycomb protein EED OS=Homo sapiens GN=EED PE=1 SV=2

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/284 (63%), Positives = 230/284 (80%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+ 
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA 427

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXC8, HOXA9, MYT1 and CDKN2A.

Homo sapiens (taxid: 9606)

>sp|Q3SZ25|EED_BOVIN Polycomb protein EED OS=Bos taurus GN=EED PE=2 SV=1

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/284 (63%), Positives = 230/284 (80%), Gaps = 2/284 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+ 
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA 427

Polycomb group (PcG) protein (By similarity). Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene (By similarity). The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems.

Bos taurus (taxid: 9913)

>sp|O16023|ESC_MUSDO Polycomb protein esc OS=Musca domestica GN=esc PE=3 SV=1

 Score =  361 bits (926), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 169/283 (59%), Positives = 207/283 (73%), Gaps = 2/283 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +E FYTC+WS DL++  PLLA AG R VIR+     +  V ++ GHG AINELKFHP+  
Sbjct: 125 DEVFYTCSWSYDLKTSAPLLATAGYRGVIRVIDIHRNESVGNYVGHGQAINELKFHPRQA 184

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLS SKDH +RLWNI+T +CIAIFGGVEGHRDEVLS DFDL G +IMS GMDHSLKLW
Sbjct: 185 NLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFDLRGERIMSSGMDHSLKLW 244

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +  PE KD    S TFNP +S  PF T  +HFP+FSTRDIHRNYVDCV+W GDFVLSKS
Sbjct: 245 RIDTPEFKDKIEMSRTFNPNKSQLPFPTIMQHFPEFSTRDIHRNYVDCVQWFGDFVLSKS 304

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG+L     +L+ N+ + TII+  N+ +CEIWF+RF  + W KI+A+GNQ 
Sbjct: 305 CENSIVCWKPGQLHQTLSQLKPNDPSCTIISEFNYDECEIWFVRFGFNPWHKIVALGNQY 364

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVW+LD  DP       L++ RC S VRQT  S++  VL+
Sbjct: 365 GKVYVWELDPSDPRHTHSSTLNNIRCTSIVRQTAFSRDATVLV 407

Polycomb group (PcG) protein. In contrast to other PcG protein, it is specifically required during the first 6 hours of embryogenesis to establish PcG silencing. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via a methylation of histones, rendering chromatin heritably changed in its expressibility. Component of the Esc/E(z) complex, which methylates 'Lys-9' and 'Lys-27' residues of histone H3. The Esc/E(z) complex is necessary but not sufficient to recruit a functional PcG repressive complex that represses target genes, suggesting that the recruitment of the distinct PRC1 complex is also required to allow a subsequent repression.

Musca domestica (taxid: 7370)

>sp|Q24338|ESC_DROME Polycomb protein esc OS=Drosophila melanogaster GN=esc PE=1 SV=1

 Score =  338 bits (867), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 155/283 (54%), Positives = 201/283 (71%), Gaps = 2/283 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +E FYTCAWS DL++  PLLA AG R VIR+     +  V ++ GHG AINELKFHP   
Sbjct: 124 DEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKL 183

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
            LLLS SKDH +RLWNI++ +CIAI GGVEGHRDEVLS DF++ G +I+S GMDHSLKLW
Sbjct: 184 QLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLW 243

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L  PE       S TF+  +ST PF T  +HFP FSTRDIHRNYVDCV+W G+FVLSKS
Sbjct: 244 CLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKS 303

Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG+L    ++++ ++++ TII    + +CEIWF+RF  + WQK++A+GNQ 
Sbjct: 304 CENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQ 363

Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVW+LD  DP       L + R ++ VRQ   S++ +VL+
Sbjct: 364 GKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSRDASVLV 406

Polycomb group (PcG) protein. While PcG proteins are generally required to maintain the transcriptionally repressive state of homeotic genes throughout development, this protein is specifically required during the first 6 hours of embryogenesis to establish the repressed state. Component of the Esc/E(z) complex, which methylates 'Lys-9' and 'Lys-27' residues of histone H3, leading to transcriptional repression of the affected target gene. The Esc/E(z) complex is necessary but not sufficient for the repression of homeotic target genes, suggesting that the recruitment of the distinct PRC1 complex is also required.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
2352418	437	extra sex combs [Schistocerca americana]	0.972	0.647	0.759	1e-132
242013769	437	Polycomb protein esc, putative [Pediculu	0.969	0.645	0.748	1e-129
91078148	423	PREDICTED: similar to extra sex combs [T	0.972	0.669	0.710	1e-125
270002345	430	hypothetical protein TcasGA2_TC001356 [T	0.972	0.658	0.710	1e-125
332373884	427	unknown [Dendroctonus ponderosae]	0.969	0.660	0.719	1e-124
322792309	425	hypothetical protein SINV_04626 [Solenop	0.965	0.661	0.680	1e-120
345480164	427	PREDICTED: polycomb protein eed-A [Nason	0.965	0.658	0.680	1e-120
332023847	425	Polycomb protein eed-A [Acromyrmex echin	0.965	0.661	0.684	1e-120
307180382	425	Polycomb protein eed-A [Camponotus flori	0.965	0.661	0.677	1e-120
346473669	318	hypothetical protein [Amblyomma maculatu	0.969	0.886	0.698	1e-118

>gi|2352418|gb|AAC05332.1| extra sex combs [Schistocerca americana]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 215/283 (75%), Positives = 253/283 (89%)

Query: 9   IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD 68
           ++EN+YTCAWS + ESG+PLLAVAGSR +IRIFSPA  +C+RH+ GHGHAINELKFHP+D
Sbjct: 140 VDENYYTCAWSYEEESGKPLLAVAGSRGIIRIFSPATLSCIRHYIGHGHAINELKFHPKD 199

Query: 69  FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128
            NLLLSVSKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFDLLG +IMSCGMDHSLKL
Sbjct: 200 PNLLLSVSKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDLLGERIMSCGMDHSLKL 259

Query: 129 WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSK 188
           W L K  +++A   SY FN ARS RPFD+ KEHFP FSTRDIHRNYVDCVRWLGDFVLSK
Sbjct: 260 WRLDKDSMREAVRNSYLFNSARSLRPFDSLKEHFPDFSTRDIHRNYVDCVRWLGDFVLSK 319

Query: 189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248
           SCENCI+CWKPGRLEDKEL+TN+TNVTII+R  +++CEIWF+RF+MD+WQKILA+GNQ G
Sbjct: 320 SCENCIVCWKPGRLEDKELKTNDTNVTIIHRFEYRECEIWFVRFAMDFWQKILALGNQVG 379

Query: 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           +T+VWDLDV DPS  +   L+HPRC++A+RQT+LS++G+VLLC
Sbjct: 380 KTFVWDLDVSDPSQSRCTALTHPRCVAAIRQTSLSRDGSVLLC 422

Source: Schistocerca americana

Species: Schistocerca americana

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013769|ref|XP_002427573.1| Polycomb protein esc, putative [Pediculus humanus corporis] gi|212511988|gb|EEB14835.1| Polycomb protein esc, putative [Pediculus humanus corporis]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 211/282 (74%), Positives = 245/282 (86%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +EN+YTCAWS D+E+G P LAVAGSR VIRI  P    C+RH+ GHGHAINELKFHP+D 
Sbjct: 141 DENYYTCAWSYDVETGNPYLAVAGSRGVIRILCPETMNCIRHYIGHGHAINELKFHPKDP 200

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           N+LLSVSKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFDL G KIMSCGMDHSLKLW
Sbjct: 201 NVLLSVSKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDLKGEKIMSCGMDHSLKLW 260

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L K ++ +    SY+FN ARS RPF++ +EHFP FSTRDIHRNYVDCVRW+GDFVLSKS
Sbjct: 261 RLDKEKMHEVLKNSYSFNAARSNRPFESHEEHFPDFSTRDIHRNYVDCVRWIGDFVLSKS 320

Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
           CENCI+CWKPGRLEDKELR NETNVTII+R  +K+CEIWF+RFSMD+WQKILA+GNQ+GR
Sbjct: 321 CENCIVCWKPGRLEDKELRNNETNVTIIHRFEYKECEIWFVRFSMDFWQKILALGNQAGR 380

Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           T+VWDLDV DP+  K   LSHP+C SAVRQT+LS++G++L+C
Sbjct: 381 TFVWDLDVPDPNLAKCITLSHPKCTSAVRQTSLSRDGSLLVC 422

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078148|ref|XP_973780.1| PREDICTED: similar to extra sex combs [Tribolium castaneum]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 201/283 (71%), Positives = 242/283 (85%)

Query: 9   IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD 68
           ++EN+YTCAW+ D E+G+PLLAVAGSR ++RI +PA   C+RH+ GHGHAINELKFHP+D
Sbjct: 127 LDENYYTCAWTYDEETGKPLLAVAGSRGIVRILNPASMTCMRHYIGHGHAINELKFHPRD 186

Query: 69  FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128
            NLLLSVSKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFDLLG +IMSCGMDHSLKL
Sbjct: 187 PNLLLSVSKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDLLGNRIMSCGMDHSLKL 246

Query: 129 WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSK 188
           W L K  +++A  +SY +N  +STRPF++ KEHFP FSTRDIHRNYVDCVRW GDFVLSK
Sbjct: 247 WKLNKESMREAIKQSYQWNTTKSTRPFNSLKEHFPDFSTRDIHRNYVDCVRWFGDFVLSK 306

Query: 189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248
           SCENCI+CWKPGRLED  LR  ET  T+I+R  +K+CEIWF+RF+MD+WQKILA+GNQ+G
Sbjct: 307 SCENCIVCWKPGRLEDDNLRKGETTSTVIHRFEYKECEIWFVRFAMDFWQKILALGNQTG 366

Query: 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           + +VWDLDV DP+  K   L HPRC +A+RQT+LS++ N+LLC
Sbjct: 367 KIFVWDLDVDDPAQAKCYTLQHPRCATAIRQTSLSRDANILLC 409

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002345|gb|EEZ98792.1| hypothetical protein TcasGA2_TC001356 [Tribolium castaneum]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 201/283 (71%), Positives = 242/283 (85%)

Query: 9   IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD 68
           ++EN+YTCAW+ D E+G+PLLAVAGSR ++RI +PA   C+RH+ GHGHAINELKFHP+D
Sbjct: 134 LDENYYTCAWTYDEETGKPLLAVAGSRGIVRILNPASMTCMRHYIGHGHAINELKFHPRD 193

Query: 69  FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128
            NLLLSVSKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFDLLG +IMSCGMDHSLKL
Sbjct: 194 PNLLLSVSKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDLLGNRIMSCGMDHSLKL 253

Query: 129 WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSK 188
           W L K  +++A  +SY +N  +STRPF++ KEHFP FSTRDIHRNYVDCVRW GDFVLSK
Sbjct: 254 WKLNKESMREAIKQSYQWNTTKSTRPFNSLKEHFPDFSTRDIHRNYVDCVRWFGDFVLSK 313

Query: 189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248
           SCENCI+CWKPGRLED  LR  ET  T+I+R  +K+CEIWF+RF+MD+WQKILA+GNQ+G
Sbjct: 314 SCENCIVCWKPGRLEDDNLRKGETTSTVIHRFEYKECEIWFVRFAMDFWQKILALGNQTG 373

Query: 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           + +VWDLDV DP+  K   L HPRC +A+RQT+LS++ N+LLC
Sbjct: 374 KIFVWDLDVDDPAQAKCYTLQHPRCATAIRQTSLSRDANILLC 416

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373884|gb|AEE62083.1| unknown [Dendroctonus ponderosae]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 242/282 (85%)

Query: 9   IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD 68
           ++ENFYTCAWS D ESG+PLLAVAG+R VIRI +P   +C +H+ GHGHAINELKFHP+D
Sbjct: 131 LDENFYTCAWSYDEESGKPLLAVAGARGVIRILNPLTMSCNKHYIGHGHAINELKFHPKD 190

Query: 69  FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128
            NLLLSVSKDH+LRLWNIK+D+CIAIFGGVEGHRDEVLSADFDLLG +IMSCGMDHSLKL
Sbjct: 191 PNLLLSVSKDHSLRLWNIKSDVCIAIFGGVEGHRDEVLSADFDLLGNRIMSCGMDHSLKL 250

Query: 129 WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSK 188
           W L K  +++A  +SY +N  R++RPFDT KEHFP FSTRDIHRNYVDCV+W GDFVLSK
Sbjct: 251 WLLDKDYMREAIKQSYNWNSNRNSRPFDTLKEHFPDFSTRDIHRNYVDCVKWFGDFVLSK 310

Query: 189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248
           SCENCIICWKPGRLED++LR  ET  TII++  +K+CEIWF+RF+MD+WQKILA+GNQ+G
Sbjct: 311 SCENCIICWKPGRLEDEQLRKGETTSTIIHKFEYKECEIWFVRFAMDFWQKILALGNQTG 370

Query: 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           + +VWDLDV DP+  K   L HPRC +A+RQTT+S+N  VLL
Sbjct: 371 KVFVWDLDVTDPAQAKCYTLQHPRCTTAIRQTTVSRNAKVLL 412

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792309|gb|EFZ16293.1| hypothetical protein SINV_04626 [Solenopsis invicta]

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 192/282 (68%), Positives = 240/282 (85%), Gaps = 1/282 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           EENFYTCAW+ D +SG+PLLAVAGSR VIRI SP+   C++H+ GHGHAINELK HP+D 
Sbjct: 131 EENFYTCAWTYD-DSGKPLLAVAGSRGVIRIISPSTMTCIKHYIGHGHAINELKIHPRDP 189

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           N+LLS SKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFD+ G +I+SCGMDH+LKLW
Sbjct: 190 NILLSASKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDIRGQRIISCGMDHALKLW 249

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L KP++++A  +SY  NP+R+ RPFD+  +HFP F+TRD+HRNYVDCV+W GDF+LSKS
Sbjct: 250 SLEKPDMQEAIKQSYHCNPSRNGRPFDSILQHFPDFTTRDVHRNYVDCVKWFGDFILSKS 309

Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
           CENCI+CWKPGRLED +LR+ ET+ T+++R  FK+C+IWFIRFSMD+WQ+ +A+GNQ GR
Sbjct: 310 CENCIVCWKPGRLEDSQLRSGETSATVLHRFEFKECDIWFIRFSMDFWQRTIALGNQVGR 369

Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           TYVWDLDV +P   +   L HPRC + +RQT+LS++G+VLLC
Sbjct: 370 TYVWDLDVDEPGQARCWSLQHPRCTAPIRQTSLSRDGSVLLC 411

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480164|ref|XP_003424096.1| PREDICTED: polycomb protein eed-A [Nasonia vitripennis]

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 192/282 (68%), Positives = 239/282 (84%), Gaps = 1/282 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           EENFYTCAW+ + ESG+PLLAVAGSR VIR+ SP    C++H+ GHGHAINELK HP+D 
Sbjct: 133 EENFYTCAWTYE-ESGKPLLAVAGSRGVIRVISPVTMTCIKHYIGHGHAINELKIHPRDP 191

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           N+LLS SKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFD+ G +I+SCGMDH+LKLW
Sbjct: 192 NILLSASKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDMKGNRIISCGMDHALKLW 251

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
           +L KP++++A  +SY  NP R+ RPFD+  +HFP F+TRD+HRNYVDCV+W GDF+LSKS
Sbjct: 252 NLDKPDMQEAIKQSYFCNPTRNGRPFDSVLQHFPDFTTRDVHRNYVDCVKWFGDFILSKS 311

Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
           CENCI+CWKPGRLED +LR NET+ T+++R  FK+C+IWFIRFSMD+WQK +A+GNQ GR
Sbjct: 312 CENCIVCWKPGRLEDTQLRNNETSATVLHRFEFKECDIWFIRFSMDFWQKTIALGNQVGR 371

Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           TYVWDL+V +P   +   L HPRC + +RQT+LS++G+VLLC
Sbjct: 372 TYVWDLEVDEPGQARCFSLQHPRCTAPIRQTSLSRDGSVLLC 413

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023847|gb|EGI64071.1| Polycomb protein eed-A [Acromyrmex echinatior]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 193/282 (68%), Positives = 237/282 (84%), Gaps = 1/282 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           EENFYTCAW+ D +SG+PLLAVAGSR VIR+ SPA   C++H+ GHGHAINELK HP+D 
Sbjct: 131 EENFYTCAWTYD-DSGKPLLAVAGSRGVIRVISPATMTCIKHYIGHGHAINELKIHPRDP 189

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           N+LLS SKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFD+ G +I+SCGMDH+LKLW
Sbjct: 190 NILLSASKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDIKGQRIISCGMDHALKLW 249

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L KP+++DA  +SY  NP R+ RPFD+  +HFP F+TRD+HRNYVDCV+W GDF+LSKS
Sbjct: 250 SLEKPDMQDAIKQSYHCNPTRNGRPFDSILQHFPDFTTRDVHRNYVDCVKWFGDFILSKS 309

Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
           CENCI+CWKPGRLED +LR  ET+ T+++R  FK+C+IWFIRFSMD+WQ+ +A+GNQ GR
Sbjct: 310 CENCIVCWKPGRLEDSQLRNGETSATVLHRFEFKECDIWFIRFSMDFWQRTIALGNQVGR 369

Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           TYVWDLDV +P   +   L HPRC   +RQT+LS++G+VLLC
Sbjct: 370 TYVWDLDVDEPGQARCWSLQHPRCTVPIRQTSLSRDGSVLLC 411

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180382|gb|EFN68408.1| Polycomb protein eed-A [Camponotus floridanus]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 191/282 (67%), Positives = 239/282 (84%), Gaps = 1/282 (0%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           EENFYTCAW+ D +SG+PLL+VAGSR VIRI SPA   C++H+ GHGHAINELK HP+D 
Sbjct: 131 EENFYTCAWTYD-DSGKPLLSVAGSRGVIRIISPATMTCIKHYIGHGHAINELKIHPKDP 189

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           N+LLS SKDH LRLWNIKTD+CIAIFGGVEGHRDEVLSADFD+ G +I+SCGMDH+LKLW
Sbjct: 190 NILLSASKDHALRLWNIKTDVCIAIFGGVEGHRDEVLSADFDIRGQRIISCGMDHALKLW 249

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L KP++++A  +SY  NP+R+ RPFD+  +HFP F+TRD+HRNYVDCV+W GDF+LSKS
Sbjct: 250 SLDKPDMQEAIKQSYHCNPSRNGRPFDSILQHFPDFTTRDVHRNYVDCVKWFGDFILSKS 309

Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
           CENCI+CWKPGRLED +LR  ET+ T+++R  FK+C+IWFIRFSMD+WQ+ +A+GNQ GR
Sbjct: 310 CENCIVCWKPGRLEDSQLRNGETSATVMHRFEFKECDIWFIRFSMDFWQRTIALGNQVGR 369

Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           TYVWDLD+++P   +   L HPRC   +RQT+LS++G+VLLC
Sbjct: 370 TYVWDLDMEEPGQARCWSLQHPRCTVPIRQTSLSRDGSVLLC 411

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346473669|gb|AEO36679.1| hypothetical protein [Amblyomma maculatum]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 197/282 (69%), Positives = 236/282 (83%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           EENFYTCAWS D  +G PLLAVAGSR VIRI SPA   C++H+ GHG+AINELKFHP D 
Sbjct: 22  EENFYTCAWSYDDVTGYPLLAVAGSRGVIRIISPAAMKCIKHYVGHGNAINELKFHPHDV 81

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDHTLRLWN+KTD CIAIFGGVEGHRDEVLSADFDLLG KIMSCGMDHSLKLW
Sbjct: 82  NLLLSVSKDHTLRLWNVKTDQCIAIFGGVEGHRDEVLSADFDLLGQKIMSCGMDHSLKLW 141

Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            L   +   A  ES+ F P+RS RPF T ++H+P F+TRDIHRNYVDCVRWLG+FVLSKS
Sbjct: 142 KLDTDQFHKAIRESHVFCPSRSQRPFPTLRQHYPDFTTRDIHRNYVDCVRWLGNFVLSKS 201

Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
           CENCI+CWKPG LE  E+R  +TNVT+++R  +++C IWF+RFSMD+ QKILA+GNQ G+
Sbjct: 202 CENCIVCWKPGLLEQLEVRHTDTNVTVLHRFEYRECNIWFMRFSMDFEQKILALGNQVGK 261

Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
           TYVWD+DV DP++ +  +L+HP+C S VRQT L+++G++LLC
Sbjct: 262 TYVWDIDVDDPTTCRSTVLTHPKCTSPVRQTNLNRDGSILLC 303

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
UNIPROTKB|Q6AZS2	438	eed-b "Polycomb protein eed-B"	0.965	0.641	0.643	4.4e-107
UNIPROTKB|F1P0V7	464	EED "Polycomb protein EED" [Ga	0.965	0.605	0.632	1.5e-106
UNIPROTKB|Q5ZKH3	446	EED "Polycomb protein EED" [Ga	0.965	0.630	0.632	1.5e-106
UNIPROTKB|Q28DT7	438	eed "Polycomb protein eed" [Xe	0.965	0.641	0.639	1.5e-106
ZFIN|ZDB-GENE-050417-287	443	eed "embryonic ectoderm develo	0.965	0.634	0.653	1.5e-106
UNIPROTKB|Q8UUP2	438	eed-a "Polycomb protein eed-A"	0.965	0.641	0.639	1.9e-106
UNIPROTKB|Q3SZ25	441	EED "Polycomb protein EED" [Bo	0.965	0.637	0.632	1.7e-105
UNIPROTKB|F1PP86	441	EED "Uncharacterized protein"	0.965	0.637	0.632	1.7e-105
UNIPROTKB|O75530	441	EED "Polycomb protein EED" [Ho	0.965	0.637	0.632	1.7e-105
MGI|MGI:95286	441	Eed "embryonic ectoderm develo	0.965	0.637	0.632	1.7e-105

UNIPROTKB|Q6AZS2 eed-b "Polycomb protein eed-B" [Xenopus laevis (taxid:8355)]

 Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
 Identities = 182/283 (64%), Positives = 232/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    +K A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   261 RINSLRMKTAIKESYDYNPNKTNRPFVSQKVHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320

Query:   190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED  ++++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   321 CENAIVCWKPGKMEDDIEKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L++P+C SA+RQT+ S++ +VL+
Sbjct:   381 GKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSVLI 423

GO:0035098 "ESC/E(Z) complex" evidence=ISS

UNIPROTKB|F1P0V7 EED "Polycomb protein EED" [Gallus gallus (taxid:9031)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 179/283 (63%), Positives = 232/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   167 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 226

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   227 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 286

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   287 RINSKRMINAIKESYEYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 346

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   347 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 406

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+++DP   K   L+HP+C++A+RQT+ S++ ++L+
Sbjct:   407 GKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILI 449

GO:0001739 "sex chromatin" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0045120 "pronucleus" evidence=IEA

UNIPROTKB|Q5ZKH3 EED "Polycomb protein EED" [Gallus gallus (taxid:9031)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 179/283 (63%), Positives = 232/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   149 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 208

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   209 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 268

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   269 RINSKRMINAIKESYEYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 328

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   329 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 388

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+++DP   K   L+HP+C++A+RQT+ S++ ++L+
Sbjct:   389 GKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILI 431

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=ISS

UNIPROTKB|Q28DT7 eed "Polycomb protein eed" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 181/283 (63%), Positives = 231/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    +K A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   261 RINSLRMKTAIRESYEYNPNKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   321 CENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L++P+C SA+RQT+ S++ ++L+
Sbjct:   381 GKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSILV 423

GO:0035098 "ESC/E(Z) complex" evidence=ISS

ZFIN|ZDB-GENE-050417-287 eed "embryonic ectoderm development" [Danio rerio (taxid:7955)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 185/283 (65%), Positives = 228/283 (80%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  S  PLLAVAGSR +IRI +     CV+H+ GHG+AINELKFHP+D 
Sbjct:   146 DENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAINELKFHPRDP 205

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSADFDLLG KIMSCGMDHSLKLW
Sbjct:   206 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADFDLLGEKIMSCGMDHSLKLW 265

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              L    ++ A   SY +NP+++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   266 RLDSERLQRAIRGSYEYNPSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 325

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPGR+ED    ++ NE+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   326 CENAIVCWKPGRMEDDIDRIKPNESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 385

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L+ PRC SA+RQT+ S++ ++L+
Sbjct:   386 GKLYVWDLEVEDPHKAKCTTLTLPRCTSAIRQTSFSRDSSILI 428

GO:0035098 "ESC/E(Z) complex" evidence=ISS

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q8UUP2 eed-a "Polycomb protein eed-A" [Xenopus laevis (taxid:8355)]

 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 181/283 (63%), Positives = 231/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    +K A  ESY +NP+++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   261 RINSLRMKTAIKESYEYNPSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   321 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+ +DP   K   L++P+C SAVRQT+ S++ ++L+
Sbjct:   381 GKLYVWDLEAEDPHKAKCTTLTYPKCASAVRQTSFSRDSSILV 423

GO:0035098 "ESC/E(Z) complex" evidence=ISS

UNIPROTKB|Q3SZ25 EED "Polycomb protein EED" [Bos taurus (taxid:9913)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 179/283 (63%), Positives = 230/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct:   384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426

GO:0035098 "ESC/E(Z) complex" evidence=ISS

GO:0045120 "pronucleus" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1PP86 EED "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 179/283 (63%), Positives = 230/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct:   384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426

GO:0045120 "pronucleus" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

UNIPROTKB|O75530 EED "Polycomb protein EED" [Homo sapiens (taxid:9606)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 179/283 (63%), Positives = 230/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct:   384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0045120 "pronucleus" evidence=IEA

GO:0005634 "nucleus" evidence=NAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=NAS

GO:0035098 "ESC/E(Z) complex" evidence=IDA

GO:0042054 "histone methyltransferase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

MGI|MGI:95286 Eed "embryonic ectoderm development" [Mus musculus (taxid:10090)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 179/283 (63%), Positives = 230/283 (81%)

Query:    10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
             +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct:   144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203

Query:    70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
             NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct:   204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263

Query:   130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
              +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct:   264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323

Query:   190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
             CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct:   324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383

Query:   248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
             G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct:   384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426

GO:0001739 "sex chromatin" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005694 "chromosome" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IMP

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0016571 "histone methylation" evidence=IMP

GO:0035098 "ESC/E(Z) complex" evidence=ISO;IDA

GO:0042054 "histone methyltransferase activity" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0045120 "pronucleus" evidence=IDA

GO:0061087 "positive regulation of histone H3-K27 methylation" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q28DT7	EED_XENTR	No assigned EC number	0.6373	0.9690	0.6438	yes	N/A
Q566T0	EED_DANRE	No assigned EC number	0.6537	0.9656	0.6343	yes	N/A
Q9LT47	FIE_ARATH	No assigned EC number	0.3894	0.9243	0.7289	yes	N/A
O75530	EED_HUMAN	No assigned EC number	0.6302	0.9690	0.6394	yes	N/A
Q3SZ25	EED_BOVIN	No assigned EC number	0.6302	0.9690	0.6394	yes	N/A
Q5ZKH3	EED_CHICK	No assigned EC number	0.6302	0.9690	0.6322	yes	N/A
Q921E6	EED_MOUSE	No assigned EC number	0.6302	0.9690	0.6394	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	291
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-19
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-16
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-15
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	8e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-11
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	6e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-05
smart00320	40	smart00320, WD40, WD40 repeats	2e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-04
smart00320	40	smart00320, WD40, WD40 repeats	4e-04
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-04
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	7e-04
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 86.2 bits (214), Expect = 1e-19
 Identities = 65/290 (22%), Positives = 106/290 (36%), Gaps = 44/290 (15%)

Query: 18  WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
             +       LLA       I+++       +R   GH   + ++     D   L S S 
Sbjct: 13  TCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA-DGTYLASGSS 71

Query: 78  DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
           D T+RLW+++T  C+       GH   V S  F   G  + S   D ++K+WD+   +  
Sbjct: 72  DKTIRLWDLETGECVRTL---TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL 128

Query: 138 DAC------AESYTFNPA----------RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL 181
                      S  F+P            + + +D +       +T   H   V+ V + 
Sbjct: 129 TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC--VATLTGHTGEVNSVAFS 186

Query: 182 GD--FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239
            D   +LS S +  I  W        +L T +   T+    N     +  + FS D    
Sbjct: 187 PDGEKLLSSSSDGTIKLW--------DLSTGKCLGTLRGHENG----VNSVAFSPD--GY 232

Query: 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL 289
           +LA G++ G   VWDL   +      Q LS     ++V     S +G  L
Sbjct: 233 LLASGSEDGTIRVWDLRTGECV----QTLSGHT--NSVTSLAWSPDGKRL 276

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 54/234 (23%), Positives = 89/234 (38%), Gaps = 46/234 (19%)

Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
             R   GH   +  + F P D  LL + S D T+++W+++T   +      +GH   V  
Sbjct: 1   LRRTLKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTL---KGHTGPVRD 56

Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT----------FNPAR------- 150
                 GT + S   D +++LWDL   E    C  + T          F+P         
Sbjct: 57  VAASADGTYLASGSSDKTIRLWDLETGE----CVRTLTGHTSYVSSVAFSPDGRILSSSS 112

Query: 151 ---STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD--FVLSKSCENCIICWKPGRLEDK 205
              + + +D +       +T   H ++V+ V +  D  FV S S +  I  W        
Sbjct: 113 RDKTIKVWDVET--GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW-------- 162

Query: 206 ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259
           +LRT +     +  L     E+  + FS D   + L   +  G   +WDL    
Sbjct: 163 DLRTGKC----VATLTGHTGEVNSVAFSPD--GEKLLSSSSDGTIKLWDLSTGK 210

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
                + A+S D E     L  + S   I+++  +   C+    GH + +N + F P   
Sbjct: 177 TGEVNSVAFSPDGEK----LLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDG- 231

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
            LL S S+D T+R+W+++T  C+       GH + V S  +   G ++ S   D ++++W
Sbjct: 232 YLLASGSEDGTIRVWDLRTGECVQTL---SGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288

Query: 130 D 130
           D
Sbjct: 289 D 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 64.7 bits (156), Expect = 8e-12
 Identities = 48/228 (21%), Positives = 85/228 (37%), Gaps = 26/228 (11%)

Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
            E+  + A+S     G+ L + +     I+++       +    GH   ++ L F P   
Sbjct: 155 SESVTSLAFS---PDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGG 211

Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
            L+ S S D T+RLW++ T   +     + GH D V+S+ F   G+ + S   D +++LW
Sbjct: 212 LLIASGSSDGTIRLWDLSTGKLLRST--LSGHSDSVVSS-FSPDGSLLASGSSDGTIRLW 268

Query: 130 D-------LTKPEIKDACAESYTFNP----------ARSTRPFDTQKEHFPQFSTRDIHR 172
           D       L       +   S  F+P            + R +D +        T   H 
Sbjct: 269 DLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHE 328

Query: 173 NYVDCVRWLGD---FVLSKSCENCIICWKPGRLEDKELRTNETNVTII 217
             V  + +  D    V   S +  I  W     +  +     +NV  +
Sbjct: 329 GPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSV 376

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 64.3 bits (155), Expect = 1e-11
 Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 35/249 (14%)

Query: 28  LLAVAGSRAVIRIFSPAFHA-CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
           LLA +     ++++  +     +R   GH  ++  L F P    L    S D T++LW++
Sbjct: 126 LLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDL 185

Query: 87  KTDICIAIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYT 145
           +T   ++      GH D V S  F   G   I S   D +++LWDL+  ++  +    ++
Sbjct: 186 RTGKPLSTL---AGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHS 242

Query: 146 FNPARSTRP----------------FDTQKEHFPQFSTRDIHRNYVDCVRWLGD--FVLS 187
            +   S  P                +D  +       T   H + V  V +  D   + S
Sbjct: 243 DSVVSSFSPDGSLLASGSSDGTIRLWDL-RSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS 301

Query: 188 KSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
            S +  +  W     +     T + +          +  +  + FS D    +++ G+  
Sbjct: 302 GSSDGTVRLWDLETGKLLSSLTLKGH----------EGPVSSLSFSPD-GSLLVSGGSDD 350

Query: 248 GRTYVWDLD 256
           G   +WDL 
Sbjct: 351 GTIRLWDLR 359

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 42.0 bits (99), Expect = 6e-06
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85
           +R   GH   +  + F P D NLL S S D T+R+W+
Sbjct: 3  LLRTLKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 57/263 (21%), Positives = 85/263 (32%), Gaps = 47/263 (17%)

Query: 52  FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAIFGGVEGHRDEVLSADF 110
             GH  +I  + F P D  LLLS S D T++LW++      I    G+  H   V     
Sbjct: 61  LRGHEDSITSIAFSP-DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGL--HDSSVSKLAL 117

Query: 111 DLL-GTKIMSCG--MDHSLKLWDLTKPEIKDACAE-------SYTFNPARSTRPFDTQKE 160
               G  I+     +D ++KLWDL+ P       E       S  F+P        +  +
Sbjct: 118 SSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLD 177

Query: 161 HF---------PQFSTRDIHRNYVDCVRWLGD---FVLSKSCENCIICWKPGRLEDKELR 208
                         ST   H + V  + +  D    + S S +  I  W           
Sbjct: 178 GTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD---------- 227

Query: 209 TNETNVTIINRLNFKDCEIWFIR-FSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQI 267
               +   + R          +  FS D    +LA G+  G   +WDL            
Sbjct: 228 ---LSTGKLLRSTLSGHSDSVVSSFSPD--GSLLASGSSDGTIRLWDLRSSSSLLRTLSG 282

Query: 268 LSHPRCMSAVRQTTLSKNGNVLL 290
            S       V     S +G +L 
Sbjct: 283 HSSS-----VLSVAFSPDGKLLA 300

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85
           ++   GH   +  + F P D   L S S D T++LW+
Sbjct: 4  LLKTLKGHTGPVTSVAFSP-DGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 99  EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
           +GH   V S  F   G  + S   D ++++WD
Sbjct: 8   KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 3/43 (6%)

Query: 88  TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
           +   +      +GH   V S  F   G  + S   D ++KLWD
Sbjct: 1   SGELLKTL---KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 12  NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL 71
             ++   S+       +++   +   +R++  +  + +R+  GH   +  L F P D   
Sbjct: 368 EGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSP-DGKS 426

Query: 72  LLSVSKDHTLRLWNIKTDICIAIFG 96
           L S S D+T+RLW++KT +    F 
Sbjct: 427 LASGSSDNTIRLWDLKTSLKSVSFS 451

Length = 466

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score = 40.7 bits (95), Expect = 7e-04
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 16/89 (17%)

Query: 54  GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI----------KTDICIAIFGGVEGHRD 103
           GH  +I +L+F+P    +L S S+D T+R+W I          K   CI     ++GH+ 
Sbjct: 72  GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCI-----LKGHKK 126

Query: 104 EVLSADFDLLGTKIM-SCGMDHSLKLWDL 131
           ++   D++ +   IM S G D  + +WD+
Sbjct: 127 KISIIDWNPMNYYIMCSSGFDSFVNIWDI 155

Length = 568

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 51  HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADF 110
           H  GH   +  + FHP   N+L S   D  + +W+++    + +   ++ H D++ S ++
Sbjct: 120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEV---IKCHSDQITSLEW 176

Query: 111 DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR 153
           +L G+ + +   D  L + D   P      +       A+S R
Sbjct: 177 NLDGSLLCTTSKDKKLNIID---PRDGTIVSSVEAHASAKSQR 216

Length = 493

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG1034|consensus	385		100.0
KOG0279|consensus	315		100.0
KOG0279|consensus	315		100.0
KOG0263|consensus	707		100.0
KOG0286|consensus	343		100.0
KOG0263|consensus	707		100.0
KOG0286|consensus	343		100.0
KOG0273|consensus	524		100.0
KOG0284|consensus	464		100.0
KOG0265|consensus	338		100.0
KOG0315|consensus	311		100.0
KOG0273|consensus	524		100.0
KOG0316|consensus	307		100.0
KOG0266|consensus	456		100.0
KOG0318|consensus	603		100.0
KOG0285|consensus	460		100.0
KOG0315|consensus	311		100.0
KOG0295|consensus	406		100.0
KOG0282|consensus	503		100.0
KOG0284|consensus	464		100.0
KOG0291|consensus	893		100.0
KOG0266|consensus	456		100.0
KOG0292|consensus	1202		100.0
KOG0281|consensus	499		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0318|consensus	603		100.0
KOG0277|consensus	311		100.0
KOG0645|consensus	312		100.0
KOG0281|consensus	499		100.0
KOG0295|consensus	406		100.0
KOG0296|consensus	399		100.0
KOG0645|consensus	312		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
PTZ00420	568	coronin; Provisional	100.0
KOG1407|consensus	313		100.0
KOG0276|consensus	794		100.0
KOG0310|consensus	487		100.0
KOG0275|consensus	508		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0276|consensus	794		100.0
KOG0291|consensus	893		100.0
KOG0292|consensus	1202		100.0
KOG0283|consensus	712		100.0
KOG0319|consensus	775		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0647|consensus	347		100.0
KOG0285|consensus	460		100.0
KOG0293|consensus	519		100.0
KOG0643|consensus	327		100.0
KOG0299|consensus	479		100.0
KOG1036|consensus	323		100.0
KOG0313|consensus	423		100.0
KOG0264|consensus	422		100.0
KOG0294|consensus	362		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0640|consensus	430		100.0
KOG0319|consensus	775		99.98
KOG0288|consensus	459		99.98
KOG0277|consensus	311		99.98
KOG0316|consensus	307		99.97
KOG0274|consensus	537		99.97
KOG0296|consensus	399		99.97
KOG1332|consensus	299		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0305|consensus	484		99.97
KOG0313|consensus	423		99.97
KOG1446|consensus	311		99.97
KOG0282|consensus	503		99.97
KOG0278|consensus	334		99.97
KOG0265|consensus	338		99.97
KOG0646|consensus	476		99.97
KOG0289|consensus	506		99.97
KOG0289|consensus	506		99.97
KOG0306|consensus	888		99.97
KOG0772|consensus	641		99.97
KOG0973|consensus	942		99.97
KOG0973|consensus	942		99.97
KOG0308|consensus	735		99.97
KOG0264|consensus	422		99.96
KOG0300|consensus	481		99.96
KOG0275|consensus	508		99.96
KOG0278|consensus	334		99.96
KOG0310|consensus	487		99.96
KOG0274|consensus	537		99.96
KOG0641|consensus	350		99.96
KOG0269|consensus	839		99.96
KOG0293|consensus	519		99.96
KOG0305|consensus	484		99.96
KOG0267|consensus	825		99.96
KOG0300|consensus	481		99.96
KOG0302|consensus	440		99.96
KOG0268|consensus	433		99.96
KOG0772|consensus	641		99.96
KOG0641|consensus	350		99.96
KOG0283|consensus	712		99.95
KOG0306|consensus	888		99.95
KOG0288|consensus	459		99.95
KOG0299|consensus	479		99.95
KOG0308|consensus	735		99.95
KOG2445|consensus	361		99.95
KOG1407|consensus	313		99.95
KOG2096|consensus	420		99.95
KOG0321|consensus	720		99.95
KOG2055|consensus	514		99.95
KOG0643|consensus	327		99.95
KOG0640|consensus	430		99.95
KOG0270|consensus	463		99.95
KOG1274|consensus	933		99.94
KOG0639|consensus	705		99.94
KOG1539|consensus	910		99.94
KOG1273|consensus	405		99.94
KOG0270|consensus	463		99.94
KOG0269|consensus	839		99.94
KOG4283|consensus	397		99.94
KOG4328|consensus	498		99.94
KOG0267|consensus	825		99.94
KOG1332|consensus	299		99.93
KOG0639|consensus	705		99.93
KOG1274|consensus	933		99.93
KOG2106|consensus	626		99.93
KOG0301|consensus	745		99.93
KOG0303|consensus	472		99.93
KOG0301|consensus	745		99.93
KOG0321|consensus	720		99.93
KOG4378|consensus	673		99.93
KOG1036|consensus	323		99.92
KOG0646|consensus	476		99.92
KOG0302|consensus	440		99.92
KOG1446|consensus	311		99.92
KOG0307|consensus	1049		99.92
KOG2048|consensus	691		99.92
KOG0647|consensus	347		99.92
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.92
KOG1009|consensus	434		99.92
KOG4283|consensus	397		99.92
KOG2048|consensus	691		99.92
KOG1408|consensus	1080		99.91
KOG1408|consensus	1080		99.91
KOG2919|consensus	406		99.91
KOG1007|consensus	370		99.91
KOG0268|consensus	433		99.91
KOG1273|consensus	405		99.91
KOG0290|consensus	364		99.9
KOG1539|consensus	910		99.9
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG0642|consensus	577		99.89
KOG0294|consensus	362		99.89
KOG1007|consensus	370		99.89
KOG2055|consensus	514		99.89
KOG1445|consensus	1012		99.89
KOG1034|consensus	385		99.88
KOG1538|consensus	1081		99.88
KOG1063|consensus	764		99.88
KOG0650|consensus	733		99.88
KOG1188|consensus	376		99.88
KOG4378|consensus	673		99.88
KOG1445|consensus	1012		99.87
KOG2106|consensus	626		99.87
KOG0644|consensus	1113		99.87
KOG2096|consensus	420		99.87
KOG4328|consensus	498		99.86
KOG0307|consensus	1049		99.86
KOG0322|consensus	323		99.86
KOG1063|consensus	764		99.86
KOG0649|consensus	325		99.85
KOG2445|consensus	361		99.85
KOG0303|consensus	472		99.84
KOG0771|consensus	398		99.84
KOG1587|consensus	555		99.84
KOG1963|consensus	792		99.83
KOG1523|consensus	361		99.83
COG2319	466	FOG: WD40 repeat [General function prediction only	99.82
KOG2919|consensus	406		99.82
KOG1524|consensus	737		99.81
KOG4227|consensus	609		99.81
KOG1517|consensus	1387		99.81
KOG0649|consensus	325		99.8
PRK11028	330	6-phosphogluconolactonase; Provisional	99.8
KOG1524|consensus	737		99.8
KOG0771|consensus	398		99.8
KOG2110|consensus	391		99.8
KOG1009|consensus	434		99.79
KOG0650|consensus	733		99.79
KOG1310|consensus	758		99.79
KOG0642|consensus	577		99.79
KOG2139|consensus	445		99.78
COG2319	466	FOG: WD40 repeat [General function prediction only	99.78
KOG1310|consensus	758		99.77
KOG0290|consensus	364		99.77
KOG1188|consensus	376		99.77
KOG2394|consensus	636		99.76
KOG2110|consensus	391		99.75
KOG1538|consensus	1081		99.75
KOG1523|consensus	361		99.74
PRK01742	429	tolB translocation protein TolB; Provisional	99.74
KOG1272|consensus	545		99.73
KOG1963|consensus	792		99.72
KOG1587|consensus	555		99.72
KOG4227|consensus	609		99.71
PRK03629	429	tolB translocation protein TolB; Provisional	99.71
PRK01742	429	tolB translocation protein TolB; Provisional	99.7
KOG1334|consensus	559		99.7
KOG1272|consensus	545		99.7
KOG0322|consensus	323		99.69
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.68
KOG1517|consensus	1387		99.68
KOG1240|consensus	1431		99.67
KOG2394|consensus	636		99.66
PRK11028	330	6-phosphogluconolactonase; Provisional	99.66
KOG2111|consensus	346		99.66
PRK04922	433	tolB translocation protein TolB; Provisional	99.65
KOG2321|consensus	703		99.65
PRK05137	435	tolB translocation protein TolB; Provisional	99.65
KOG3881|consensus	412		99.64
KOG0974|consensus	967		99.64
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.63
KOG0644|consensus	1113		99.62
KOG1240|consensus	1431		99.62
PRK02889	427	tolB translocation protein TolB; Provisional	99.62
PRK03629	429	tolB translocation protein TolB; Provisional	99.61
PRK02889	427	tolB translocation protein TolB; Provisional	99.61
PRK05137	435	tolB translocation protein TolB; Provisional	99.61
KOG2139|consensus	445		99.6
KOG4497|consensus	447		99.6
PRK04922	433	tolB translocation protein TolB; Provisional	99.6
KOG0280|consensus	339		99.59
KOG2111|consensus	346		99.59
KOG4547|consensus	541		99.55
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.55
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.55
KOG4497|consensus	447		99.54
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.54
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.54
KOG0280|consensus	339		99.53
PRK00178	430	tolB translocation protein TolB; Provisional	99.52
KOG3881|consensus	412		99.51
PRK04792	448	tolB translocation protein TolB; Provisional	99.5
KOG2321|consensus	703		99.5
KOG4547|consensus	541		99.48
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.48
KOG1354|consensus	433		99.47
PRK00178	430	tolB translocation protein TolB; Provisional	99.46
KOG2314|consensus	698		99.46
KOG1409|consensus	404		99.46
KOG0974|consensus	967		99.45
KOG1334|consensus	559		99.44
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.43
KOG1354|consensus	433		99.42
KOG1409|consensus	404		99.42
KOG2041|consensus	1189		99.41
KOG3914|consensus	390		99.4
KOG1064|consensus	2439		99.4
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.4
PRK01029	428	tolB translocation protein TolB; Provisional	99.37
PRK04792	448	tolB translocation protein TolB; Provisional	99.36
KOG2695|consensus	425		99.34
COG4946	668	Uncharacterized protein related to the periplasmic	99.31
KOG1064|consensus	2439		99.28
KOG2695|consensus	425		99.28
COG4946	668	Uncharacterized protein related to the periplasmic	99.28
PRK01029	428	tolB translocation protein TolB; Provisional	99.26
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.25
KOG2315|consensus	566		99.22
KOG2315|consensus	566		99.2
KOG4190|consensus	1034		99.2
KOG4532|consensus	344		99.2
KOG1275|consensus	1118		99.17
KOG0309|consensus	1081		99.17
KOG4190|consensus	1034		99.16
KOG1912|consensus	1062		99.14
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.14
KOG2066|consensus	846		99.14
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.13
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.13
KOG1912|consensus	1062		99.11
KOG4532|consensus	344		99.11
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.11
KOG4714|consensus	319		99.1
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.09
KOG4714|consensus	319		99.07
PRK04043	419	tolB translocation protein TolB; Provisional	99.07
PRK04043	419	tolB translocation protein TolB; Provisional	99.07
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.05
KOG0882|consensus	558		99.05
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.05
KOG3914|consensus	390		99.04
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.04
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.04
KOG0309|consensus	1081		99.02
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.02
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.02
KOG1008|consensus	783		99.0
KOG1832|consensus	1516		98.98
KOG2314|consensus	698		98.98
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.95
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.95
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.94
KOG3617|consensus	1416		98.91
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.9
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.89
KOG2041|consensus	1189		98.85
KOG1645|consensus	463		98.85
KOG2066|consensus	846		98.83
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.79
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.77
KOG1275|consensus	1118		98.77
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.73
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.7
KOG0882|consensus	558		98.68
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.68
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.66
KOG1645|consensus	463		98.65
KOG2114|consensus	933		98.64
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.64
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.61
KOG3621|consensus	726		98.57
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.56
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.52
KOG1920|consensus	1265		98.51
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.5
KOG1920|consensus	1265		98.41
KOG4640|consensus	665		98.38
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.38
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.37
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.37
PRK02888	635	nitrous-oxide reductase; Validated	98.34
KOG4640|consensus	665		98.31
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.3
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.3
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	98.29
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.22
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.17
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.13
KOG1832|consensus	1516		98.13
KOG4649|consensus	354		98.12
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.12
KOG1008|consensus	783		98.09
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.07
KOG3621|consensus	726		98.06
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.02
PHA02713	557	hypothetical protein; Provisional	98.01
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.0
KOG3617|consensus	1416		97.92
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.9
COG3391	381	Uncharacterized conserved protein [Function unknow	97.89
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.89
KOG2114|consensus	933		97.87
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.86
KOG4649|consensus	354		97.86
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.85
KOG2444|consensus	238		97.83
PRK02888	635	nitrous-oxide reductase; Validated	97.81
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.71
KOG4441|consensus	571		97.62
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.62
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.61
KOG4441|consensus	571		97.6
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.58
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.57
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.56
KOG2079|consensus	1206		97.55
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.54
PHA03098	534	kelch-like protein; Provisional	97.53
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.52
COG3391	381	Uncharacterized conserved protein [Function unknow	97.47
KOG2444|consensus	238		97.46
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.46
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.44
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.43
PHA02790	480	Kelch-like protein; Provisional	97.43
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.43
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.43
KOG2395|consensus	644		97.4
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.39
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.22
KOG2395|consensus	644		97.15
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.13
PRK13616	591	lipoprotein LpqB; Provisional	97.12
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.1
PHA02713	557	hypothetical protein; Provisional	97.09
KOG2079|consensus	1206		97.03
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.87
COG5276	370	Uncharacterized conserved protein [Function unknow	96.86
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.82
KOG2280|consensus	829		96.7
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.6
PRK13616	591	lipoprotein LpqB; Provisional	96.56
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.48
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.46
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.34
KOG1900|consensus	1311		96.31
KOG1897|consensus	1096		96.31
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.26
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.24
KOG2377|consensus	657		96.1
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.06
KOG3630|consensus	1405		96.03
KOG3630|consensus	1405		95.97
PHA03098	534	kelch-like protein; Provisional	95.94
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.92
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	95.9
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.85
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.77
KOG4499|consensus	310		95.74
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	95.69
COG4590	733	ABC-type uncharacterized transport system, permeas	95.66
PHA02790	480	Kelch-like protein; Provisional	95.62
KOG1898|consensus	1205		95.58
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.5
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.38
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	95.27
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	95.25
KOG4499|consensus	310		95.18
KOG2247|consensus	615		95.18
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.16
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.92
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	94.81
KOG1983|consensus	993		94.79
KOG1916|consensus	1283		94.67
COG5276	370	Uncharacterized conserved protein [Function unknow	94.63
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.46
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	94.39
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	94.23
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	94.05
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.89
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	93.83
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	93.78
COG5167	776	VID27 Protein involved in vacuole import and degra	93.64
KOG1916|consensus	1283		93.45
KOG2247|consensus	615		93.4
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	93.13
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	93.1
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	92.8
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	92.73
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	92.73
PLN02153	341	epithiospecifier protein	92.49
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	92.49
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	92.37
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	92.21
COG5167	776	VID27 Protein involved in vacuole import and degra	92.2
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	91.99
KOG4460|consensus	741		91.93
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	91.8
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	91.65
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	91.62
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	91.24
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	91.22
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	91.11
PF12768	281	Rax2: Cortical protein marker for cell polarity	91.07
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	90.67
PRK10115	686	protease 2; Provisional	90.65
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	90.61
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	90.6
KOG2280|consensus	829		90.31
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	90.22
KOG2377|consensus	657		90.14
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	90.13
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	90.11
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	89.77
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	89.37
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	89.07
PF14727	418	PHTB1_N: PTHB1 N-terminus	88.89
PLN02193	470	nitrile-specifier protein	88.8
PF12768	281	Rax2: Cortical protein marker for cell polarity	88.52
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	88.31
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	88.2
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	88.16
KOG1900|consensus	1311		88.13
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	87.94
PRK13684	334	Ycf48-like protein; Provisional	87.91
KOG1897|consensus	1096		87.4
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	87.38
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	87.03
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	87.02
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	86.57
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	85.97
COG1520	370	FOG: WD40-like repeat [Function unknown]	85.94
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	85.51
PLN02193	470	nitrile-specifier protein	85.34
KOG1896|consensus	1366		84.94
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	84.91
PLN02153	341	epithiospecifier protein	84.64
KOG4460|consensus	741		84.61
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	83.18
PF14727	418	PHTB1_N: PTHB1 N-terminus	83.08
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	82.99
KOG3522|consensus	925		82.98
PF08954	136	DUF1900: Domain of unknown function (DUF1900); Int	82.63
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	81.32

>KOG0271|consensus

Probab=100.00  E-value=5e-46  Score=274.15  Aligned_cols=232  Identities=19%  Similarity=0.267  Sum_probs=203.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.++|.|+.|+|++    ..|++|+.|.++|+||+.+..++.+.++|...|.|++|+| |++.||+|+.||+|++||.+
T Consensus       113 GH~e~Vl~~~fsp~g----~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsP-Dgk~iASG~~dg~I~lwdpk  187 (480)
T KOG0271|consen  113 GHGEAVLSVQFSPTG----SRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSP-DGKKIASGSKDGSIRLWDPK  187 (480)
T ss_pred             CCCCcEEEEEecCCC----ceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECC-CcchhhccccCCeEEEecCC
Confidence            488999999999998    5999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEcc-----CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDL-----LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +|+++..-  +.+|...|++++|.|     ..++|++++.||.++|||+..+.++..+.                     
T Consensus       188 tg~~~g~~--l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~ls---------------------  244 (480)
T KOG0271|consen  188 TGQQIGRA--LRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLS---------------------  244 (480)
T ss_pred             CCCccccc--ccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEec---------------------
Confidence            99876532  389999999999976     56799999999999999999988766553                     


Q ss_pred             cccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE--------
Q psy10348        163 PQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS--------  233 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------  233 (291)
                             +|..+|+|+.|- .+++++|+.|++|++|+...+..            .+.+.+|...|+.++++        
T Consensus       245 -------gHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~------------~r~lkGHahwvN~lalsTdy~LRtg  305 (480)
T KOG0271|consen  245 -------GHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKL------------CRELKGHAHWVNHLALSTDYVLRTG  305 (480)
T ss_pred             -------cCccceEEEEEcCCceEEecCCCceEEEEEccchhH------------HHhhcccchheeeeeccchhhhhcc
Confidence                   599999999998 56999999999999999988744            78888888888887776        


Q ss_pred             -ecCCC-------------------------cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348        234 -MDYWQ-------------------------KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       234 -~~~~~-------------------------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                       ++|.+                         ..|++|++|+++.+|+-...+.     ......+|..-|+.+.||||++
T Consensus       306 af~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kk-----pi~rmtgHq~lVn~V~fSPd~r  380 (480)
T KOG0271|consen  306 AFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKK-----PITRMTGHQALVNHVSFSPDGR  380 (480)
T ss_pred             ccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccccc-----chhhhhchhhheeeEEECCCcc
Confidence             23333                         3599999999999999876542     2334558999999999999999


Q ss_pred             eeeC
Q psy10348        288 VLLC  291 (291)
Q Consensus       288 ~l~s  291 (291)
                      ++|+
T Consensus       381 ~IAS  384 (480)
T KOG0271|consen  381 YIAS  384 (480)
T ss_pred             EEEE
Confidence            9985

>KOG0271|consensus

Probab=100.00  E-value=7.3e-44  Score=262.77  Aligned_cols=255  Identities=20%  Similarity=0.339  Sum_probs=213.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-EEEeeeccceeEEEEecC----CCcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-RHFYGHGHAINELKFHPQ----DFNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~----~~~~l~s~~~dg~i~   82 (291)
                      .|...|.|++|+||+    +.||+|+.||.|++||.++|+++ ..+.+|...|++++|.|-    ..++||+++.||.|+
T Consensus       155 gH~~WVlcvawsPDg----k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vr  230 (480)
T KOG0271|consen  155 GHKNWVLCVAWSPDG----KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVR  230 (480)
T ss_pred             CCccEEEEEEECCCc----chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEE
Confidence            588999999999999    59999999999999999998765 678999999999999762    457999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcccc-----------------c
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESY-----------------T  145 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------------~  145 (291)
                      |||+..+.++..+   .+|+.+|+|+.|--+| ++++|+.|++|++|+...|.+.+.+..+.                 .
T Consensus       231 IWd~~~~~~~~~l---sgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtga  306 (480)
T KOG0271|consen  231 IWDTKLGTCVRTL---SGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGA  306 (480)
T ss_pred             EEEccCceEEEEe---ccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccc
Confidence            9999999999998   7999999999997554 89999999999999999999888877421                 1


Q ss_pred             cCCCCcccc-----------------------------------ccCccccCcccccccccCcceeEEEEc--CCEEEEe
Q psy10348        146 FNPARSTRP-----------------------------------FDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK  188 (291)
Q Consensus       146 ~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  188 (291)
                      |.|.+....                                   |... .....+....+|..-|+.+.|+  +.+++++
T Consensus       307 f~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~-~~kkpi~rmtgHq~lVn~V~fSPd~r~IASa  385 (480)
T KOG0271|consen  307 FDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPF-KSKKPITRMTGHQALVNHVSFSPDGRYIASA  385 (480)
T ss_pred             cccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccc-ccccchhhhhchhhheeeEEECCCccEEEEe
Confidence            222221100                                   0001 1112344556899999999999  6799999


Q ss_pred             cCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEE
Q psy10348        189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQIL  268 (291)
Q Consensus       189 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  268 (291)
                      +-|..|++||.++++.            +.+|.+|-..|+-++|+.+  .++|++|+.|.++++|++++.+      ...
T Consensus       386 SFDkSVkLW~g~tGk~------------lasfRGHv~~VYqvawsaD--sRLlVS~SkDsTLKvw~V~tkK------l~~  445 (480)
T KOG0271|consen  386 SFDKSVKLWDGRTGKF------------LASFRGHVAAVYQVAWSAD--SRLLVSGSKDSTLKVWDVRTKK------LKQ  445 (480)
T ss_pred             ecccceeeeeCCCcch------------hhhhhhccceeEEEEeccC--ccEEEEcCCCceEEEEEeeeee------ecc
Confidence            9999999999999955            8999999999998877755  9999999999999999999875      345


Q ss_pred             eccccccceeeeEEccCCceeeC
Q psy10348        269 SHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       269 ~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..++|...|.++.|+|||+.+++
T Consensus       446 DLpGh~DEVf~vDwspDG~rV~s  468 (480)
T KOG0271|consen  446 DLPGHADEVFAVDWSPDGQRVAS  468 (480)
T ss_pred             cCCCCCceEEEEEecCCCceeec
Confidence            56789999999999999998875

>KOG0272|consensus

Probab=100.00  E-value=2.2e-43  Score=262.95  Aligned_cols=229  Identities=22%  Similarity=0.293  Sum_probs=206.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-CCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..+.+|..+.||.++    ..||||+.+|.++||+..+...+++|.+|...|.++.|+|. ++..+|||+.||++++|++
T Consensus       173 gd~rPis~~~fS~ds----~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~  248 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDS----KHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKL  248 (459)
T ss_pred             cCCCcceeeEeecCC----CeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeecc
Confidence            346899999999999    59999999999999999999999999999999999999996 3679999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .+..++..+   .+|...|..++|+|+|++|+|++.|.+-++||++++..+-..                          
T Consensus       249 ~~e~~l~~l---~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~Q--------------------------  299 (459)
T KOG0272|consen  249 SQETPLQDL---EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQ--------------------------  299 (459)
T ss_pred             CCCcchhhh---hcchhhheeeeecCCCceeeecccccchhhcccccchhhHhh--------------------------
Confidence            988888887   899999999999999999999999999999999998865443                          


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        .+|...|.+++|+  |.++++|+.|..-+|||++++.+            +..+.+|...|..+.|+  |+|..||+|
T Consensus       300 --EGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~------------im~L~gH~k~I~~V~fs--PNGy~lATg  363 (459)
T KOG0272|consen  300 --EGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRC------------IMFLAGHIKEILSVAFS--PNGYHLATG  363 (459)
T ss_pred             --cccccccceeEecCCCceeeccCccchhheeecccCcE------------EEEecccccceeeEeEC--CCceEEeec
Confidence              4699999999998  88999999999999999999965            88899999988876665  669999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceeeC
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLLC  291 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~s  291 (291)
                      +.|++++|||++..++      ....++|..-|+.|.|+| .|++|++
T Consensus       364 s~Dnt~kVWDLR~r~~------ly~ipAH~nlVS~Vk~~p~~g~fL~T  405 (459)
T KOG0272|consen  364 SSDNTCKVWDLRMRSE------LYTIPAHSNLVSQVKYSPQEGYFLVT  405 (459)
T ss_pred             CCCCcEEEeeeccccc------ceecccccchhhheEecccCCeEEEE
Confidence            9999999999998763      444568999999999999 6888774

>KOG0272|consensus

Probab=100.00  E-value=5.2e-44  Score=266.28  Aligned_cols=231  Identities=18%  Similarity=0.241  Sum_probs=210.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.+.++.|+|..  ++..+|+|+.||++++|++++..++..+.+|...|..++|+| +|++|+|++.|.+-++||++
T Consensus       215 gH~~~v~~~~fhP~~--~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~  291 (459)
T KOG0272|consen  215 GHTSRVGAAVFHPVD--SDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLE  291 (459)
T ss_pred             ccccceeeEEEccCC--CccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecC-CCceeeecccccchhhcccc
Confidence            588999999999984  126899999999999999999899999999999999999999 99999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ++..+...   .+|...|.+++|.|+|.++++|+.|..-+|||++++.++-.+                           
T Consensus       292 tk~ElL~Q---EGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L---------------------------  341 (459)
T KOG0272|consen  292 TKSELLLQ---EGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFL---------------------------  341 (459)
T ss_pred             cchhhHhh---cccccccceeEecCCCceeeccCccchhheeecccCcEEEEe---------------------------
Confidence            99888776   799999999999999999999999999999999999976555                           


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                       .+|..+|..|+|+  |-.++||+.|++++|||++....            +..+.+|..-|.-+++.+ ..|.+|++++
T Consensus       342 -~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~------------ly~ipAH~nlVS~Vk~~p-~~g~fL~Tas  407 (459)
T KOG0272|consen  342 -AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE------------LYTIPAHSNLVSQVKYSP-QEGYFLVTAS  407 (459)
T ss_pred             -cccccceeeEeECCCceEEeecCCCCcEEEeeeccccc------------ceecccccchhhheEecc-cCCeEEEEcc
Confidence             4599999999999  66999999999999999998754            888999999999888887 3599999999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|+++++|.-.+..++    ..+  .+|++.|.+++.+||++++++
T Consensus       408 yD~t~kiWs~~~~~~~----ksL--aGHe~kV~s~Dis~d~~~i~t  447 (459)
T KOG0272|consen  408 YDNTVKIWSTRTWSPL----KSL--AGHEGKVISLDISPDSQAIAT  447 (459)
T ss_pred             cCcceeeecCCCcccc----hhh--cCCccceEEEEeccCCceEEE
Confidence            9999999999998654    333  389999999999999999875

>KOG1034|consensus

Probab=100.00  E-value=3.1e-42  Score=249.42  Aligned_cols=281  Identities=57%  Similarity=1.100  Sum_probs=257.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .+++..+.|+|+-+.+...+++|+||.-|.|+|.|+.+++....+.+|...|+.+.++|.+.+++++++.|..|++|+++
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~  166 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ  166 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence            37889999999999877778999999999999999999999999999999999999999888999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +..++..+..+.+|.+.|.++.|+++|.+|++++.|.++++|++...+....++....+.|+.+.+++.+...++|.+++
T Consensus       167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst  246 (385)
T KOG1034|consen  167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFST  246 (385)
T ss_pred             CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccc
Confidence            99999999988999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             ccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcc--ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                      .+.|..+|.|+.|-|+++++-+.++.|..|.....+..  ...+.+...+.+.++....+.+|.+.++++|-+++||.|.
T Consensus       247 ~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gn  326 (385)
T KOG1034|consen  247 TDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGN  326 (385)
T ss_pred             cccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhcc
Confidence            99999999999999999999999999999998533322  3445566677889999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..|.|.+||+++.++.  ...++.+......|+..+||.||..|+
T Consensus       327 q~g~v~vwdL~~~ep~--~~ttl~~s~~~~tVRQ~sfS~dgs~lv  369 (385)
T KOG1034|consen  327 QSGKVYVWDLDNNEPP--KCTTLTHSKSGSTVRQTSFSRDGSILV  369 (385)
T ss_pred             CCCcEEEEECCCCCCc--cCceEEeccccceeeeeeecccCcEEE
Confidence            9999999999998764  335555556678999999999999986

>KOG0279|consensus

Probab=100.00  E-value=1.3e-38  Score=225.85  Aligned_cols=233  Identities=20%  Similarity=0.268  Sum_probs=189.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|+..|..++.+++++    +.++++.|+++++||+.+++..+.|.+|...|.+++|++ +.+.+++|+.|.+|++|+..
T Consensus        61 GHsH~v~dv~~s~dg~----~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~  135 (315)
T KOG0279|consen   61 GHSHFVSDVVLSSDGN----FALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTL  135 (315)
T ss_pred             ccceEecceEEccCCc----eEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeec
Confidence            4889999999999995    999999999999999999999999999999999999999 88999999999999999988


Q ss_pred             CcceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                       +.+..++.. ..+.+.|.|+.|+|+  ..+|++++.|++|++||+++.+....+.                        
T Consensus       136 -g~ck~t~~~-~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~------------------------  189 (315)
T KOG0279|consen  136 -GVCKYTIHE-DSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFI------------------------  189 (315)
T ss_pred             -ccEEEEEec-CCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccc------------------------
Confidence             455554421 233889999999998  6799999999999999999998776654                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                          +|...++.++++  |.+.++|+.||.+.+||++..+.            +..+. +...|.+++|  +|+..+|+.
T Consensus       190 ----gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~------------lysl~-a~~~v~sl~f--spnrywL~~  250 (315)
T KOG0279|consen  190 ----GHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN------------LYSLE-AFDIVNSLCF--SPNRYWLCA  250 (315)
T ss_pred             ----cccccEEEEEECCCCCEEecCCCCceEEEEEccCCce------------eEecc-CCCeEeeEEe--cCCceeEee
Confidence                499999999998  88999999999999999999854            55544 3344555555  465666666


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEecc---ccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHP---RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.. ..|+|||+.++..+..+......+   ...-...+++|++||+.|++
T Consensus       251 at~-~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~  300 (315)
T KOG0279|consen  251 ATA-TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFA  300 (315)
T ss_pred             ccC-CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEe
Confidence            654 459999999987665443333222   11234568999999999874

>KOG0279|consensus

Probab=100.00  E-value=1.2e-38  Score=225.95  Aligned_cols=230  Identities=24%  Similarity=0.347  Sum_probs=199.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC-----CcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-----FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      -.|.+.|..++..+...   ..+++++.|.++.+|++.     .|..++.+.+|+..|..+..++ ++++.++++.|+++
T Consensus        12 ~gh~d~Vt~la~~~~~~---~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD~~l   87 (315)
T KOG0279|consen   12 EGHTDWVTALAIKIKNS---DILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWDGTL   87 (315)
T ss_pred             cCCCceEEEEEeecCCC---ceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEcc-CCceEEeccccceE
Confidence            45889999999999855   699999999999999875     4677899999999999999999 99999999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ++||+.+++..+.|   .+|...|.+++|+++.+.+++|+.|.+|++|++..........                    
T Consensus        88 rlWDl~~g~~t~~f---~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~--------------------  144 (315)
T KOG0279|consen   88 RLWDLATGESTRRF---VGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHE--------------------  144 (315)
T ss_pred             EEEEecCCcEEEEE---EecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEec--------------------
Confidence            99999999988888   8999999999999999999999999999999987654322111                    


Q ss_pred             CcccccccccCcceeEEEEcCC----EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWLGD----FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~~~----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                             ..+.+.|+|+.|+++    +|++++.|++|++||+++.+.            ...+.+|...++.+.++  ||
T Consensus       145 -------~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l------------~~~~~gh~~~v~t~~vS--pD  203 (315)
T KOG0279|consen  145 -------DSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQL------------RTTFIGHSGYVNTVTVS--PD  203 (315)
T ss_pred             -------CCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcch------------hhccccccccEEEEEEC--CC
Confidence                   224788999999833    899999999999999999854            77888899988877666  55


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |..+++|+.||.+.+||++.++.    +..+   .+...|++++|+|+.-.|++
T Consensus       204 GslcasGgkdg~~~LwdL~~~k~----lysl---~a~~~v~sl~fspnrywL~~  250 (315)
T KOG0279|consen  204 GSLCASGGKDGEAMLWDLNEGKN----LYSL---EAFDIVNSLCFSPNRYWLCA  250 (315)
T ss_pred             CCEEecCCCCceEEEEEccCCce----eEec---cCCCeEeeEEecCCceeEee
Confidence            99999999999999999999863    2333   56789999999999877753

>KOG0263|consensus

Probab=100.00  E-value=1.9e-39  Score=259.15  Aligned_cols=204  Identities=22%  Similarity=0.389  Sum_probs=189.7

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ...|.++|+.+.|+|+.    ++|+++++|+++|+|.+.+...+-.+++|..||..+.|+| .|.+|||++.|++.++|.
T Consensus       447 L~GH~GPVyg~sFsPd~----rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs  521 (707)
T KOG0263|consen  447 LYGHSGPVYGCSFSPDR----RFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWS  521 (707)
T ss_pred             eecCCCceeeeeecccc----cceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeee
Confidence            45799999999999999    5999999999999999999999999999999999999999 899999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .....+.+.+   .+|-+.|.|+.|+|++.++++|+.|.++|+||+.+|..++.+                         
T Consensus       522 ~d~~~PlRif---aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF-------------------------  573 (707)
T KOG0263|consen  522 TDHNKPLRIF---AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF-------------------------  573 (707)
T ss_pred             cccCCchhhh---cccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe-------------------------
Confidence            9988888888   899999999999999999999999999999999999977665                         


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                         .+|.++|.+++|+  |.+|++|+.|+.|++||+.++..            +..+.+|.+.+..+.|+.+  |..||+
T Consensus       574 ---~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~------------v~~l~~Ht~ti~SlsFS~d--g~vLas  636 (707)
T KOG0263|consen  574 ---TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSL------------VKQLKGHTGTIYSLSFSRD--GNVLAS  636 (707)
T ss_pred             ---cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcc------------hhhhhcccCceeEEEEecC--CCEEEe
Confidence               3699999999999  89999999999999999999854            8888999988888888755  999999


Q ss_pred             EcCCCcEEEEEcCCCC
Q psy10348        244 GNQSGRTYVWDLDVQD  259 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~  259 (291)
                      |+.|++|++||+....
T Consensus       637 gg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  637 GGADNSVRLWDLTKVI  652 (707)
T ss_pred             cCCCCeEEEEEchhhc
Confidence            9999999999997543

>KOG0286|consensus

Probab=100.00  E-value=4.2e-38  Score=224.64  Aligned_cols=229  Identities=24%  Similarity=0.322  Sum_probs=199.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      .....|..|+|+|.++    ++|.|+-|+...||++.+.      +..+.+.+|++.+.++.|.+ | ..|+|++.|.+.
T Consensus        95 l~s~WVMtCA~sPSg~----~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D-~~ilT~SGD~TC  168 (343)
T KOG0286|consen   95 LPSSWVMTCAYSPSGN----FVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-D-NHILTGSGDMTC  168 (343)
T ss_pred             cCceeEEEEEECCCCC----eEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-C-CceEecCCCceE
Confidence            3468899999999995    9999999999999999855      34567889999999999997 5 688999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      .+||+++++.+..|   .+|.+.|.++.++| +++.+++|+-|+..++||++.+...++|.                   
T Consensus       169 alWDie~g~~~~~f---~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~-------------------  226 (343)
T KOG0286|consen  169 ALWDIETGQQTQVF---HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFE-------------------  226 (343)
T ss_pred             EEEEcccceEEEEe---cCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeec-------------------
Confidence            99999999999999   79999999999999 89999999999999999999999887775                   


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                               +|+..|+++.|.  |.-+++|+.|++.++||++..++.          .+..-.....+|+.++|+.+  |
T Consensus       227 ---------ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~----------a~ys~~~~~~gitSv~FS~S--G  285 (343)
T KOG0286|consen  227 ---------GHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL----------AVYSHDSIICGITSVAFSKS--G  285 (343)
T ss_pred             ---------ccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE----------eeeccCcccCCceeEEEccc--c
Confidence                     599999999998  789999999999999999998662          12223334566778888777  9


Q ss_pred             cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|++|..|.++.+||.-.++.      .....+|+..|.++..+|||.-|++
T Consensus       286 RlLfagy~d~~c~vWDtlk~e~------vg~L~GHeNRvScl~~s~DG~av~T  332 (343)
T KOG0286|consen  286 RLLFAGYDDFTCNVWDTLKGER------VGVLAGHENRVSCLGVSPDGMAVAT  332 (343)
T ss_pred             cEEEeeecCCceeEeeccccce------EEEeeccCCeeEEEEECCCCcEEEe
Confidence            9999999999999999988752      2333389999999999999998874

>KOG0263|consensus

Probab=100.00  E-value=5e-39  Score=256.79  Aligned_cols=226  Identities=24%  Similarity=0.415  Sum_probs=201.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-------------------------------eeEEEeeeccc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-------------------------------CVRHFYGHGHA   58 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-------------------------------~~~~~~~~~~~   58 (291)
                      ...++|..|+++..    ++|.|-.|..|++|.+...+                               ..+.+.+|.++
T Consensus       378 ~~~v~ca~fSddss----mlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GP  453 (707)
T KOG0263|consen  378 YQGVTCAEFSDDSS----MLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGP  453 (707)
T ss_pred             CCcceeEeecCCcc----hhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCc
Confidence            47789999999984    99999999999999876311                               12346799999


Q ss_pred             eeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhh
Q psy10348         59 INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD  138 (291)
Q Consensus        59 v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~  138 (291)
                      |....|+| +.++|++++.|+++++|.+.+..++..+   ++|..+|+.+.|+|.|-+|+|++.|++.++|.....++.+
T Consensus       454 Vyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y---~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlR  529 (707)
T KOG0263|consen  454 VYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIY---KGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLR  529 (707)
T ss_pred             eeeeeecc-cccceeeccCCcceeeeecccceeEEEe---cCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchh
Confidence            99999999 8899999999999999999999999988   7999999999999999999999999999999999887766


Q ss_pred             hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceee
Q psy10348        139 ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTI  216 (291)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  216 (291)
                      .+.                            +|.+.|.|+.|+  .+|+++|+.|.++++||..++..            
T Consensus       530 ifa----------------------------ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~------------  569 (707)
T KOG0263|consen  530 IFA----------------------------GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS------------  569 (707)
T ss_pred             hhc----------------------------ccccccceEEECCcccccccCCCCceEEEEEcCCCcE------------
Confidence            654                            599999999999  66999999999999999999855            


Q ss_pred             eeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        217 INRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.|.+|..+|.++++++  +|++|++|+.||.|++||+.+++.+      ....+|.+.|.++.||.||..||+
T Consensus       570 VRiF~GH~~~V~al~~Sp--~Gr~LaSg~ed~~I~iWDl~~~~~v------~~l~~Ht~ti~SlsFS~dg~vLas  636 (707)
T KOG0263|consen  570 VRIFTGHKGPVTALAFSP--CGRYLASGDEDGLIKIWDLANGSLV------KQLKGHTGTIYSLSFSRDGNVLAS  636 (707)
T ss_pred             EEEecCCCCceEEEEEcC--CCceEeecccCCcEEEEEcCCCcch------hhhhcccCceeEEEEecCCCEEEe
Confidence            899999999999888875  5999999999999999999998633      334477899999999999999985

>KOG0286|consensus

Probab=100.00  E-value=3.7e-37  Score=219.83  Aligned_cols=234  Identities=16%  Similarity=0.252  Sum_probs=204.1

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .-.|..+|+++.|++|.    +++++++.||.+.|||.-+...++.+......|-.++|+| .++++|.|+.|....||+
T Consensus        51 LkGH~~Ki~~~~ws~Ds----r~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sP-Sg~~VAcGGLdN~Csiy~  125 (343)
T KOG0286|consen   51 LKGHLNKIYAMDWSTDS----RRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSP-SGNFVACGGLDNKCSIYP  125 (343)
T ss_pred             ecccccceeeeEecCCc----CeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECC-CCCeEEecCcCceeEEEe
Confidence            34688999999999999    5999999999999999999888888888889999999999 999999999999999999


Q ss_pred             CCCc--c-eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         86 IKTD--I-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        86 ~~~~--~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +.+.  + .+..-+.+.+|.+.+.|+.|-+ ...|++++.|.+..+||+++++....+.                     
T Consensus       126 ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~---------------------  183 (343)
T KOG0286|consen  126 LSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFH---------------------  183 (343)
T ss_pred             cccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEec---------------------
Confidence            9854  1 1122223489999999999987 5579999999999999999999776654                     


Q ss_pred             cccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                             +|.+.|.++.+.   ++.+++|+.|+..++||++.+..            +++|.+|...|+.++|-|+  |.
T Consensus       184 -------GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c------------~qtF~ghesDINsv~ffP~--G~  242 (343)
T KOG0286|consen  184 -------GHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQC------------VQTFEGHESDINSVRFFPS--GD  242 (343)
T ss_pred             -------CCcccEEEEecCCCCCCeEEecccccceeeeeccCcce------------eEeecccccccceEEEccC--CC
Confidence                   599999999997   67999999999999999999854            8999999999999887754  99


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      -+++|++|++.++||++....    ...+....-..+|++++||..|++|.+
T Consensus       243 afatGSDD~tcRlyDlRaD~~----~a~ys~~~~~~gitSv~FS~SGRlLfa  290 (343)
T KOG0286|consen  243 AFATGSDDATCRLYDLRADQE----LAVYSHDSIICGITSVAFSKSGRLLFA  290 (343)
T ss_pred             eeeecCCCceeEEEeecCCcE----EeeeccCcccCCceeEEEcccccEEEe
Confidence            999999999999999999753    355555566779999999999999974

>KOG0273|consensus

Probab=100.00  E-value=5.3e-37  Score=232.02  Aligned_cols=228  Identities=20%  Similarity=0.311  Sum_probs=194.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      +.+..|++++|+.+++    +||+|..||.+++|+.. |.++.++..|+++|.++.|+. .|.+|++++.|+++.+||..
T Consensus       233 ~~nkdVT~L~Wn~~G~----~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~  306 (524)
T KOG0273|consen  233 PSNKDVTSLDWNNDGT----LLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAH  306 (524)
T ss_pred             CccCCcceEEecCCCC----eEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEecc
Confidence            4468899999999995    99999999999999965 888899999999999999999 99999999999999999986


Q ss_pred             Ccceeeeec--------------------------------------cccCCCCceEEEEEccCCCEEEEEecCCcEEEE
Q psy10348         88 TDICIAIFG--------------------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW  129 (291)
Q Consensus        88 ~~~~~~~~~--------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~  129 (291)
                      ++...+.+.                                      .+.+|.++|.++.|+|.|.+|++++.|++++||
T Consensus       307 ~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiW  386 (524)
T KOG0273|consen  307 TGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIW  386 (524)
T ss_pred             CceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEee
Confidence            654332221                                      147899999999999999999999999999999


Q ss_pred             eccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-----------CCEEEEecCCCeEEEec
Q psy10348        130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----------GDFVLSKSCENCIICWK  198 (291)
Q Consensus       130 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----------~~~l~~~~~d~~i~iwd  198 (291)
                      ..........+.                            +|...|..+.|+           +..+++++.|++|++||
T Consensus       387 s~~~~~~~~~l~----------------------------~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd  438 (524)
T KOG0273|consen  387 SMGQSNSVHDLQ----------------------------AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD  438 (524)
T ss_pred             ecCCCcchhhhh----------------------------hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence            988777665554                            377777777775           34899999999999999


Q ss_pred             CCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccccccee
Q psy10348        199 PGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR  278 (291)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~  278 (291)
                      +..+.+            ++.+..|..+|+.++|+  |+|+++|+|+.||.|.+|+..+++.    ....   .-.+.|.
T Consensus       439 v~~gv~------------i~~f~kH~~pVysvafS--~~g~ylAsGs~dg~V~iws~~~~~l----~~s~---~~~~~If  497 (524)
T KOG0273|consen  439 VESGVP------------IHTLMKHQEPVYSVAFS--PNGRYLASGSLDGCVHIWSTKTGKL----VKSY---QGTGGIF  497 (524)
T ss_pred             ccCCce------------eEeeccCCCceEEEEec--CCCcEEEecCCCCeeEeccccchhe----eEee---cCCCeEE
Confidence            999854            88999999999988776  5599999999999999999999842    2333   3346799


Q ss_pred             eeEEccCCceee
Q psy10348        279 QTTLSKNGNVLL  290 (291)
Q Consensus       279 ~~~~s~~g~~l~  290 (291)
                      .++|+.+|.+|.
T Consensus       498 el~Wn~~G~kl~  509 (524)
T KOG0273|consen  498 ELCWNAAGDKLG  509 (524)
T ss_pred             EEEEcCCCCEEE
Confidence            999999999875

>KOG0284|consensus

Probab=100.00  E-value=2.7e-38  Score=235.04  Aligned_cols=230  Identities=19%  Similarity=0.311  Sum_probs=202.1

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      -.|+.+|+++.|++++.    .+++|..+|.|++|+.. ...++.+++|. ..|++++|+| +...|++++.||+|+|||
T Consensus       135 QaHDs~Vr~m~ws~~g~----wmiSgD~gG~iKyWqpn-mnnVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWd  208 (464)
T KOG0284|consen  135 QAHDSPVRTMKWSHNGT----WMISGDKGGMIKYWQPN-MNNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWD  208 (464)
T ss_pred             hhhcccceeEEEccCCC----EEEEcCCCceEEecccc-hhhhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEe
Confidence            36899999999999994    99999999999999986 44455566555 8999999999 778999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ....++...+   .+|.-.|.+++|+|...++++++.|..|++||.+++.++.++.                        
T Consensus       209 f~~~kee~vL---~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh------------------------  261 (464)
T KOG0284|consen  209 FRMPKEERVL---RGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLH------------------------  261 (464)
T ss_pred             ccCCchhhee---ccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhh------------------------
Confidence            9988888887   7999999999999999999999999999999999999987775                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                          .|...|..+.|+  +++|++++.|..++++|+++.++            +..+.+|...++.+.+.|- ...+|.+
T Consensus       262 ----~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkE------------l~~~r~Hkkdv~~~~WhP~-~~~lfts  324 (464)
T KOG0284|consen  262 ----GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKE------------LFTYRGHKKDVTSLTWHPL-NESLFTS  324 (464)
T ss_pred             ----hccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHH------------HHHhhcchhhheeeccccc-cccceee
Confidence                499999999998  88999999999999999997755            8889999999988887763 3678999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+.||.|..|.+...+++.    . -..+|...|++++|+|-|.+|++
T Consensus       325 gg~Dgsvvh~~v~~~~p~~----~-i~~AHd~~iwsl~~hPlGhil~t  367 (464)
T KOG0284|consen  325 GGSDGSVVHWVVGLEEPLG----E-IPPAHDGEIWSLAYHPLGHILAT  367 (464)
T ss_pred             ccCCCceEEEecccccccc----C-CCcccccceeeeeccccceeEee
Confidence            9999999999998655432    1 23388999999999999999875

>KOG0265|consensus

Probab=100.00  E-value=1.1e-36  Score=218.02  Aligned_cols=266  Identities=21%  Similarity=0.258  Sum_probs=215.5

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC-CcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      +....|++.|+.+.|+|+++    +||+|+.|..|.+|+.. ..+-...+++|+++|..+.|.+ +++.+++++.|.+|+
T Consensus        41 m~l~gh~geI~~~~F~P~gs----~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v~  115 (338)
T KOG0265|consen   41 MLLPGHKGEIYTIKFHPDGS----CFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMR-DGSHILSCGTDKTVR  115 (338)
T ss_pred             hhcCCCcceEEEEEECCCCC----eEeecCCcceEEEEeccccccceeeeccccceeEeeeecc-CCCEEEEecCCceEE
Confidence            34567899999999999985    99999999999999954 3345667889999999999999 999999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhcc-----ccccCCCCcccccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAE-----SYTFNPARSTRPFD  156 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~  156 (291)
                      .||.++|+.++.+   ++|..-|..+.-+.-|. ++.+++.|+++++||+++...++++..     .+.|..........
T Consensus       116 ~wD~~tG~~~rk~---k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sg  192 (338)
T KOG0265|consen  116 GWDAETGKRIRKH---KGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISG  192 (338)
T ss_pred             EEecccceeeehh---ccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeec
Confidence            9999999999998   89999999998444454 566788899999999998888877743     44555554444433


Q ss_pred             CccccC--------cccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC--c
Q psy10348        157 TQKEHF--------PQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK--D  224 (291)
Q Consensus       157 ~~~~~~--------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~  224 (291)
                      ......        .....+.+|..+|+.+..+  |.++.+-+.|+++++||++.....        .+++..+.++  .
T Consensus       193 gIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~--------~R~v~if~g~~hn  264 (338)
T KOG0265|consen  193 GIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPS--------QRCVKIFQGHIHN  264 (338)
T ss_pred             cccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCC--------CceEEEeecchhh
Confidence            333221        2345667899999999988  889999999999999999765332        1335555554  4


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      -.++.+..+++|++.++..|+.|..+++||.....      ..+..++|.+.|++++|+|...+|.+
T Consensus       265 feknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~------~lyklpGh~gsvn~~~Fhp~e~iils  325 (338)
T KOG0265|consen  265 FEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRR------ILYKLPGHYGSVNEVDFHPTEPIILS  325 (338)
T ss_pred             hhhhcceeeccCCCCccccccccceEEEeeccccc------EEEEcCCcceeEEEeeecCCCcEEEE
Confidence            45667888999999999999999999999998864      56677899999999999999988753

>KOG0315|consensus

Probab=100.00  E-value=3.4e-36  Score=210.45  Aligned_cols=217  Identities=23%  Similarity=0.317  Sum_probs=184.7

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce--eeeeccccCCCCc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC--IAIFGGVEGHRDE  104 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~  104 (291)
                      -+|++++.|.+||+|...+|.+.++++...+.|+.+...| +++.||+++. ..|++||+++++.  +..+   .+|...
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp-dk~~LAaa~~-qhvRlyD~~S~np~Pv~t~---e~h~kN   85 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITP-DKKDLAAAGN-QHVRLYDLNSNNPNPVATF---EGHTKN   85 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcC-CcchhhhccC-CeeEEEEccCCCCCceeEE---eccCCc
Confidence            4899999999999999999999999998888999999999 8899998875 5799999998754  6666   799999


Q ss_pred             eEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        105 VLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      |..+.|..+|+.+++|++||+++|||++...+.+.+.                             |.++|+++..+  .
T Consensus        86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-----------------------------~~spVn~vvlhpnQ  136 (311)
T KOG0315|consen   86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-----------------------------HNSPVNTVVLHPNQ  136 (311)
T ss_pred             eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-----------------------------CCCCcceEEecCCc
Confidence            9999999999999999999999999999977666654                             88999999998  4


Q ss_pred             CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348        183 DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      ..|++|..+|.|++||+......            ..+ ......+..  +...|||.+|+.+...|+.++|++.+....
T Consensus       137 teLis~dqsg~irvWDl~~~~c~------------~~liPe~~~~i~s--l~v~~dgsml~a~nnkG~cyvW~l~~~~~~  202 (311)
T KOG0315|consen  137 TELISGDQSGNIRVWDLGENSCT------------HELIPEDDTSIQS--LTVMPDGSMLAAANNKGNCYVWRLLNHQTA  202 (311)
T ss_pred             ceEEeecCCCcEEEEEccCCccc------------cccCCCCCcceee--EEEcCCCcEEEEecCCccEEEEEccCCCcc
Confidence            48999999999999999887442            111 112233444  455577999999999999999999987766


Q ss_pred             cceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..+....+.+.|++-+..+.+|||+++||+
T Consensus       203 s~l~P~~k~~ah~~~il~C~lSPd~k~lat  232 (311)
T KOG0315|consen  203 SELEPVHKFQAHNGHILRCLLSPDVKYLAT  232 (311)
T ss_pred             ccceEhhheecccceEEEEEECCCCcEEEe
Confidence            566666677899999999999999999985

>KOG0273|consensus

Probab=100.00  E-value=1.2e-36  Score=230.07  Aligned_cols=259  Identities=22%  Similarity=0.342  Sum_probs=204.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--cc--eeEEEe------e----eccceeEEEEecCCCcEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--HA--CVRHFY------G----HGHAINELKFHPQDFNLL   72 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--~~--~~~~~~------~----~~~~v~~~~~~~~~~~~l   72 (291)
                      +.|+.+|.+++|+|-..   .++++|+.|-+.++|++..  +.  ....++      +    ....|++++|+. +|.+|
T Consensus       175 l~~~~~V~~~~WnP~~~---~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~-~G~~L  250 (524)
T KOG0273|consen  175 LRHESEVFICAWNPLRD---GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNN-DGTLL  250 (524)
T ss_pred             ccCCCceEEEecCchhh---hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecC-CCCeE
Confidence            34899999999999874   4999999999999999864  11  111111      1    236799999999 99999


Q ss_pred             EEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc------ccc
Q psy10348         73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES------YTF  146 (291)
Q Consensus        73 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~  146 (291)
                      |+|+.||.+++|+.. |..+..+   ..|+++|.++.|+..|.+|++++.|+++.+||..+++..+.+..+      +.|
T Consensus       251 atG~~~G~~riw~~~-G~l~~tl---~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW  326 (524)
T KOG0273|consen  251 ATGSEDGEARIWNKD-GNLISTL---GQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDW  326 (524)
T ss_pred             EEeecCcEEEEEecC-chhhhhh---hccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEE
Confidence            999999999999976 7777777   789999999999999999999999999999999888766555421      222


Q ss_pred             CCCCcccc-------ccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeee
Q psy10348        147 NPARSTRP-------FDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       147 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      ........       .........+..++.+|.+.|.++.|+  +.+|++++.|+++++|.......            .
T Consensus       327 ~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~------------~  394 (524)
T KOG0273|consen  327 QSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNS------------V  394 (524)
T ss_pred             ecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcc------------h
Confidence            22211111       111223334566777899999999999  88999999999999999877644            7


Q ss_pred             eeecCCcccEEEEEEEecC-------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        218 NRLNFKDCEIWFIRFSMDY-------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       218 ~~~~~~~~~i~~~~~~~~~-------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.+..|...|..+.++|..       .+..+++++.|++|++||+..+.+      +....+|..+|.+++|||+|+|||
T Consensus       395 ~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~------i~~f~kH~~pVysvafS~~g~ylA  468 (524)
T KOG0273|consen  395 HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVP------IHTLMKHQEPVYSVAFSPNGRYLA  468 (524)
T ss_pred             hhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCce------eEeeccCCCceEEEEecCCCcEEE
Confidence            8888999888888887641       356899999999999999999964      333447889999999999999998


Q ss_pred             C
Q psy10348        291 C  291 (291)
Q Consensus       291 s  291 (291)
                      +
T Consensus       469 s  469 (524)
T KOG0273|consen  469 S  469 (524)
T ss_pred             e
Confidence            5

>KOG0316|consensus

Probab=100.00  E-value=9.6e-36  Score=206.66  Aligned_cols=255  Identities=16%  Similarity=0.281  Sum_probs=194.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      -++++|.++.|+-+++    +.++++.|.+|++|++..+.+++++.+|...|..++.+. |...|++|+.|..+.+||++
T Consensus        15 ~~qgaV~avryN~dGn----Y~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~   89 (307)
T KOG0316|consen   15 CAQGAVRAVRYNVDGN----YCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVN   89 (307)
T ss_pred             ccccceEEEEEccCCC----EEEEcCCCceEEeecccccceeeeecCCCceeeeccccc-cccccccCCCCceEEEEEcc
Confidence            4689999999999995    999999999999999999999999999999999999998 88999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch--hhhhhccccc----cCCCCccccccCcccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE--IKDACAESYT----FNPARSTRPFDTQKEH  161 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~  161 (291)
                      +|+.++.+   .+|.+.|+.++|+.+...+++|+.|.++++||.++..  +++.+.....    ..-......-....+.
T Consensus        90 TGkv~Rr~---rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGt  166 (307)
T KOG0316|consen   90 TGKVDRRF---RGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGT  166 (307)
T ss_pred             cCeeeeec---ccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCc
Confidence            99999999   8999999999999999999999999999999998754  3333332100    0000000111111121


Q ss_pred             Ccccccc------cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        162 FPQFSTR------DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       162 ~~~~~~~------~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                      ...+...      +....+|+++.|+  ++..+.++.|+++++.|-.+++            .+..+.+|...-+-+..+
T Consensus       167 vRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGk------------lL~sYkGhkn~eykldc~  234 (307)
T KOG0316|consen  167 VRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGK------------LLKSYKGHKNMEYKLDCC  234 (307)
T ss_pred             EEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhH------------HHHHhcccccceeeeeee
Confidence            1112111      1234556666666  5666666667777777666664            478888888888888888


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccc-eeeeEEccCCce
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSA-VRQTTLSKNGNV  288 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~  288 (291)
                      .......+++|++||.|++||+.....      ..+.+.+... |.+++++|.-.-
T Consensus       235 l~qsdthV~sgSEDG~Vy~wdLvd~~~------~sk~~~~~~v~v~dl~~hp~~~~  284 (307)
T KOG0316|consen  235 LNQSDTHVFSGSEDGKVYFWDLVDETQ------ISKLSVVSTVIVTDLSCHPTMDD  284 (307)
T ss_pred             ecccceeEEeccCCceEEEEEecccee------eeeeccCCceeEEeeecccCccc
Confidence            877789999999999999999998752      2233344455 789999997543

>KOG0266|consensus

Probab=100.00  E-value=1.4e-35  Score=240.90  Aligned_cols=231  Identities=22%  Similarity=0.352  Sum_probs=196.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEcc-CCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSP-AFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ..|...|++++|+|++    .++++++.|++|+|||+ ..+..++++++|...|++++|+| .++++++|+.|++|+|||
T Consensus       200 ~~h~~~v~~~~fs~d~----~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd  274 (456)
T KOG0266|consen  200 SGHTRGVSDVAFSPDG----SYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWD  274 (456)
T ss_pred             cccccceeeeEECCCC----cEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEe
Confidence            4688999999999999    49999999999999999 55688999999999999999999 779999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh--hhhhccccccCCCCccccccCccccCc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI--KDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      +++++++..+   .+|.+.|.+++|++++++|++++.|+.|++||+.++..  ...+..                     
T Consensus       275 ~~~~~~~~~l---~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~---------------------  330 (456)
T KOG0266|consen  275 VRTGECVRKL---KGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSG---------------------  330 (456)
T ss_pred             ccCCeEEEee---eccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccC---------------------
Confidence            9999999999   89999999999999999999999999999999999983  333221                     


Q ss_pred             ccccccccCc--ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE-EEEEEecCCC
Q psy10348        164 QFSTRDIHRN--YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW-FIRFSMDYWQ  238 (291)
Q Consensus       164 ~~~~~~~~~~--~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~  238 (291)
                             +..  +++++.|+  +.++++++.|+.+++||++....            +..+.+|...+. .......+.+
T Consensus       331 -------~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  391 (456)
T KOG0266|consen  331 -------AENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKS------------VGTYTGHSNLVRCIFSPTLSTGG  391 (456)
T ss_pred             -------CCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcc------------eeeecccCCcceeEecccccCCC
Confidence                   222  59999998  88999999999999999998855            666666665432 2234446779


Q ss_pred             cEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc-ccceeeeEEccCCceeeC
Q psy10348        239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC-MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~s  291 (291)
                      .++++|+.|+.|++||+.++..+      ....+| ...+..++|+|..+++++
T Consensus       392 ~~i~sg~~d~~v~~~~~~s~~~~------~~l~~h~~~~~~~~~~~~~~~~~~s  439 (456)
T KOG0266|consen  392 KLIYSGSEDGSVYVWDSSSGGIL------QRLEGHSKAAVSDLSSHPTENLIAS  439 (456)
T ss_pred             CeEEEEeCCceEEEEeCCccchh------hhhcCCCCCceeccccCCCcCeeee
Confidence            99999999999999999986532      223356 778999999999888764

>KOG0318|consensus

Probab=100.00  E-value=8.4e-35  Score=223.04  Aligned_cols=274  Identities=14%  Similarity=0.209  Sum_probs=209.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      -|...|++|.|-|...   -++++|++|+.|.+|+-..-+...+++.|..-|.++.|+| ||.++|+++.||++.+||-.
T Consensus       145 GhSr~ins~~~KpsRP---fRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysP-DG~~Fat~gsDgki~iyDGk  220 (603)
T KOG0318|consen  145 GHSRRINSVDFKPSRP---FRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGK  220 (603)
T ss_pred             ccceeEeeeeccCCCc---eEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECC-CCCeEEEecCCccEEEEcCC
Confidence            4788999999999876   6899999999999999877777788889999999999999 89999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccc---------c--------CCCC
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT---------F--------NPAR  150 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---------~--------~~~~  150 (291)
                      +|+.+..+..-.+|++.|.++.|+||+..|++++.|.+++|||+.+.++++++.....         +        +..+
T Consensus       221 tge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G  300 (603)
T KOG0318|consen  221 TGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSG  300 (603)
T ss_pred             CccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCc
Confidence            9999999965569999999999999999999999999999999999988877653211         1        1111


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc--CC---------------
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT--NE---------------  211 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~---------------  211 (291)
                      ....++...  ........+|...|+++..+  +.+|++|+.||.|.-|+..++....+..  +.               
T Consensus       301 ~in~ln~~d--~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~  378 (603)
T KOG0318|consen  301 TINYLNPSD--PSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELF  378 (603)
T ss_pred             EEEEecccC--CChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEE
Confidence            111111111  12556678899999999998  7799999999999999998775542210  00               


Q ss_pred             -----Cceee----------------------eee-----------------ecCCcc------cEEEEEEEecCCCcEE
Q psy10348        212 -----TNVTI----------------------INR-----------------LNFKDC------EIWFIRFSMDYWQKIL  241 (291)
Q Consensus       212 -----~~~~~----------------------~~~-----------------~~~~~~------~i~~~~~~~~~~~~~l  241 (291)
                           ...+.                      +..                 ++.+..      .-...+.+.+|++..+
T Consensus       379 t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~v  458 (603)
T KOG0318|consen  379 TIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEV  458 (603)
T ss_pred             EEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEE
Confidence                 00000                      000                 000000      0012345566889999


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+|+.||+|+||.+......    .......|.++|++++||||+.|||+
T Consensus       459 aVGG~Dgkvhvysl~g~~l~----ee~~~~~h~a~iT~vaySpd~~yla~  504 (603)
T KOG0318|consen  459 AVGGQDGKVHVYSLSGDELK----EEAKLLEHRAAITDVAYSPDGAYLAA  504 (603)
T ss_pred             EEecccceEEEEEecCCccc----ceeeeecccCCceEEEECCCCcEEEE
Confidence            99999999999999987532    22223367889999999999999985

>KOG0285|consensus

Probab=100.00  E-value=3.2e-36  Score=220.86  Aligned_cols=227  Identities=14%  Similarity=0.202  Sum_probs=200.3

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|.|+++-|..    ..|++|+.|++|+|||+.+|++..++.+|...|..+++++ ...++++++.|+.|+.||+
T Consensus       148 ~gHlgWVr~vavdP~n----~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~-rHpYlFs~gedk~VKCwDL  222 (460)
T KOG0285|consen  148 SGHLGWVRSVAVDPGN----EWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQVKCWDL  222 (460)
T ss_pred             hhccceEEEEeeCCCc----eeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc-cCceEEEecCCCeeEEEec
Confidence            4588999999999997    5999999999999999999999999999999999999999 7789999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +..+.++.+   .+|-..|+|++.+|.-..|++|+.|.++++||+++...+..+                          
T Consensus       223 e~nkvIR~Y---hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l--------------------------  273 (460)
T KOG0285|consen  223 EYNKVIRHY---HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVL--------------------------  273 (460)
T ss_pred             hhhhhHHHh---ccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEe--------------------------
Confidence            999998888   799999999999999999999999999999999998866554                          


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        .+|..+|..+.+.  ...+++|+.|++|++||++.++.            +..+..|...+.++  +.+|....+|++
T Consensus       274 --~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt------------~~tlt~hkksvral--~lhP~e~~fASa  337 (460)
T KOG0285|consen  274 --SGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKT------------MITLTHHKKSVRAL--CLHPKENLFASA  337 (460)
T ss_pred             --cCCCCcceeEEeecCCCceEEecCCceEEEeeeccCce------------eEeeecccceeeEE--ecCCchhhhhcc
Confidence              4699999999998  67999999999999999999854            67777777666655  455668999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.| .|+-|++..+..+.    .  ..+|..-|++++...||-+++
T Consensus       338 s~d-nik~w~~p~g~f~~----n--lsgh~~iintl~~nsD~v~~~  376 (460)
T KOG0285|consen  338 SPD-NIKQWKLPEGEFLQ----N--LSGHNAIINTLSVNSDGVLVS  376 (460)
T ss_pred             CCc-cceeccCCccchhh----c--cccccceeeeeeeccCceEEE
Confidence            988 59999999986432    2  347888999999999887764

>KOG0315|consensus

Probab=100.00  E-value=7.1e-35  Score=203.86  Aligned_cols=235  Identities=16%  Similarity=0.249  Sum_probs=191.6

Q ss_pred             eee-cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          7 LLI-EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         7 ~~~-~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      ++| +..|+.+...|+.    +.||+++. -.||+||++++.  ++.++.+|+..|.++.|.. +|+.+++|++||+++|
T Consensus        36 iqh~dsqVNrLeiTpdk----~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~-dgrWMyTgseDgt~kI  109 (311)
T KOG0315|consen   36 IQHPDSQVNRLEITPDK----KDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQC-DGRWMYTGSEDGTVKI  109 (311)
T ss_pred             EecCccceeeEEEcCCc----chhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEee-cCeEEEecCCCceEEE
Confidence            444 5789999999998    48888776 589999998875  5889999999999999999 9999999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ||++...+.+.+    .|..+|+++..+|+...|++|..+|.|++||+.+..+...+..      +              
T Consensus       110 WdlR~~~~qR~~----~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liP------e--------------  165 (311)
T KOG0315|consen  110 WDLRSLSCQRNY----QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIP------E--------------  165 (311)
T ss_pred             EeccCcccchhc----cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCC------C--------------
Confidence            999987666665    7889999999999999999999999999999998765443321      0              


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                             ....|.++...  |.+++.+...|+..+|++-....      .....++..++.|...+....+  +||+++|
T Consensus       166 -------~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~------~s~l~P~~k~~ah~~~il~C~l--SPd~k~l  230 (311)
T KOG0315|consen  166 -------DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQT------ASELEPVHKFQAHNGHILRCLL--SPDVKYL  230 (311)
T ss_pred             -------CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCc------cccceEhhheecccceEEEEEE--CCCCcEE
Confidence                   23456666665  88999999999999999876322      1222557778888887665555  5669999


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+++.|.+++||+.++.-   +  ..+...+|+..+..++||.||+||++
T Consensus       231 at~ssdktv~iwn~~~~~---k--le~~l~gh~rWvWdc~FS~dg~YlvT  275 (311)
T KOG0315|consen  231 ATCSSDKTVKIWNTDDFF---K--LELVLTGHQRWVWDCAFSADGEYLVT  275 (311)
T ss_pred             EeecCCceEEEEecCCce---e--eEEEeecCCceEEeeeeccCccEEEe
Confidence            999999999999999861   1  33344478899999999999999985

>KOG0295|consensus

Probab=100.00  E-value=2.2e-36  Score=221.85  Aligned_cols=230  Identities=21%  Similarity=0.330  Sum_probs=201.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|..+|+.+.|+|+.    .++++++.|++|++||..++++...+++|++.|..+.|+. .|.++++++.|-.+++||..
T Consensus       106 g~r~~vt~v~~hp~~----~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a-~Gk~l~tcSsDl~~~LWd~~  180 (406)
T KOG0295|consen  106 GHRSSVTRVIFHPSE----ALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDA-SGKYLATCSSDLSAKLWDFD  180 (406)
T ss_pred             ccccceeeeeeccCc----eEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEec-CccEEEecCCccchhheeHH
Confidence            478899999999998    4999999999999999999999999999999999999999 89999999999999999998


Q ss_pred             C-cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 T-DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      + .++++.+   .+|...|.+++|-|.|.++++++.|.+|+.|++.++.++.++.                         
T Consensus       181 ~~~~c~ks~---~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~-------------------------  232 (406)
T KOG0295|consen  181 TFFRCIKSL---IGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFP-------------------------  232 (406)
T ss_pred             HHHHHHHHh---cCcccceeeEEEEecCCeeeecccccceeEEecccceeEEecc-------------------------
Confidence            6 3455555   7999999999999999999999999999999999999887775                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC--------
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY--------  236 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------  236 (291)
                         +|...|..++.+  |.++++++.|.+|++|-+.+.++            ...+..|+.++.+++|++..        
T Consensus       233 ---~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~------------k~~lR~hEh~vEci~wap~~~~~~i~~a  297 (406)
T KOG0295|consen  233 ---GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQC------------KAELREHEHPVECIAWAPESSYPSISEA  297 (406)
T ss_pred             ---CchHhEEEEEecCCeeEEEecCCCceEEEEEeccchh------------hhhhhccccceEEEEecccccCcchhhc
Confidence               488899999998  77999999999999999998855            45556666666666666521        


Q ss_pred             -----CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 -----WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 -----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                           .++++.+++.|++|++||+.++.      .++...+|...|++++|+|-|+||++
T Consensus       298 t~~~~~~~~l~s~SrDktIk~wdv~tg~------cL~tL~ghdnwVr~~af~p~Gkyi~S  351 (406)
T KOG0295|consen  298 TGSTNGGQVLGSGSRDKTIKIWDVSTGM------CLFTLVGHDNWVRGVAFSPGGKYILS  351 (406)
T ss_pred             cCCCCCccEEEeecccceEEEEeccCCe------EEEEEecccceeeeeEEcCCCeEEEE
Confidence                 24699999999999999999995      33444489999999999999999985

>KOG0282|consensus

Probab=100.00  E-value=1.8e-36  Score=229.75  Aligned_cols=237  Identities=15%  Similarity=0.234  Sum_probs=199.3

Q ss_pred             eecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|+++.|.| .+    .+|++++.|+.|+||++.. +++++++.+|..+|..++|++ ++..|++++.|+.|++||
T Consensus       212 gH~kgvsai~~fp~~~----hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD~~lKlwD  286 (503)
T KOG0282|consen  212 GHTKGVSAIQWFPKKG----HLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNN-CGTSFLSASFDRFLKLWD  286 (503)
T ss_pred             CCccccchhhhcccee----eEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccc-cCCeeeeeecceeeeeec
Confidence            5889999999999 55    6999999999999999876 899999999999999999999 999999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      +++|+++..+    .....++|+.|+|++ +.|++|+.|+.|+.||+++++.++.+..                      
T Consensus       287 tETG~~~~~f----~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~----------------------  340 (503)
T KOG0282|consen  287 TETGQVLSRF----HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDR----------------------  340 (503)
T ss_pred             cccceEEEEE----ecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHh----------------------
Confidence            9999999988    456678999999998 7899999999999999999999888764                      


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc--------------CC-----------------
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT--------------NE-----------------  211 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------------~~-----------------  211 (291)
                            |-+.|..+.|-  +.++++.+.|+.++||+.+..-......              ..                 
T Consensus       341 ------hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~  414 (503)
T KOG0282|consen  341 ------HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFST  414 (503)
T ss_pred             ------hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEec
Confidence                  88889999997  7799999999999999987664431110              00                 


Q ss_pred             ---CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348        212 ---TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       212 ---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                         .....-..+.+|...-+.+.+.++|||.+|++|+.||.+.+||.++-+.+    .  ..+.|.+++..+.|+|...
T Consensus       415 ~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~----~--~lkah~~~ci~v~wHP~e~  487 (503)
T KOG0282|consen  415 VPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLV----S--KLKAHDQPCIGVDWHPVEP  487 (503)
T ss_pred             ccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhh----h--ccccCCcceEEEEecCCCc
Confidence               00111234566666667888899999999999999999999999987532    2  2347788999999999643

>KOG0284|consensus

Probab=100.00  E-value=3.9e-37  Score=228.89  Aligned_cols=225  Identities=16%  Similarity=0.282  Sum_probs=191.5

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +-+|..+.|.|+|    +.|++|+..|.+.+|+..+-.....+++|..+|.++.|++ ++.++++|+.+|.|++|+..-.
T Consensus        96 kc~V~~v~WtPeG----RRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpnmn  170 (464)
T KOG0284|consen   96 KCPVNVVRWTPEG----RRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSH-NGTWMISGDKGGMIKYWQPNMN  170 (464)
T ss_pred             ccceeeEEEcCCC----ceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEcc-CCCEEEEcCCCceEEecccchh
Confidence            4578899999998    6999999999999999865555556789999999999999 9999999999999999998743


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                       .++.++  ..|...|++++|+|+...|++++.||+|+|||....+....+                            .
T Consensus       171 -nVk~~~--ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL----------------------------~  219 (464)
T KOG0284|consen  171 -NVKIIQ--AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVL----------------------------R  219 (464)
T ss_pred             -hhHHhh--HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhhee----------------------------c
Confidence             444442  345599999999999999999999999999999988765554                            3


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS  247 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d  247 (291)
                      +|.-.|.+++|+  ..++++++.|+.|++||.+++.+            +.++..|...|..+.|.  |++++|++++.|
T Consensus       220 GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~c------------l~tlh~HKntVl~~~f~--~n~N~Llt~skD  285 (464)
T KOG0284|consen  220 GHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSC------------LATLHGHKNTVLAVKFN--PNGNWLLTGSKD  285 (464)
T ss_pred             cCCCCcceeccCCccceeEEccCCceeEeecCCCcch------------hhhhhhccceEEEEEEc--CCCCeeEEccCC
Confidence            599999999999  55999999999999999999966            88888888877766665  559999999999


Q ss_pred             CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..++++|+++.+      .++...+|...|++++|+|-..-|+
T Consensus       286 ~~~kv~DiR~mk------El~~~r~Hkkdv~~~~WhP~~~~lf  322 (464)
T KOG0284|consen  286 QSCKVFDIRTMK------ELFTYRGHKKDVTSLTWHPLNESLF  322 (464)
T ss_pred             ceEEEEehhHhH------HHHHhhcchhhheeeccccccccce
Confidence            999999999765      3444558999999999999655443

>KOG0291|consensus

Probab=100.00  E-value=1.6e-34  Score=230.20  Aligned_cols=260  Identities=17%  Similarity=0.275  Sum_probs=206.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCC-CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~d-g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      +.+|..++|+..|+    .+|.|+.. |.+-||+.++...+...++|...+++++++| ||.++|+|+.||.|+|||...
T Consensus       307 ~~~I~t~~~N~tGD----WiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~S  381 (893)
T KOG0291|consen  307 DQKILTVSFNSTGD----WIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQS  381 (893)
T ss_pred             cceeeEEEecccCC----EEEEcCCccceEEEEEeeccceeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEeccC
Confidence            47888999998884    99988765 8999999999998888999999999999999 999999999999999999999


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-------ccccCCCCccccccCcc--
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-------SYTFNPARSTRPFDTQK--  159 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--  159 (291)
                      |-|..+|   ..|+..|+.++|+..|+.+++++.||+|+.||+...+.-+++..       ++...|.+..+......  
T Consensus       382 gfC~vTF---teHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F  458 (893)
T KOG0291|consen  382 GFCFVTF---TEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSF  458 (893)
T ss_pred             ceEEEEe---ccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceE
Confidence            9999999   79999999999999999999999999999999988777666553       34444555444333222  


Q ss_pred             -------ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348        160 -------EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       160 -------~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                             ..-..+..+.+|+++|.+++|+  ++.|++++.|.+|++||+-.....           +.++.....   ++
T Consensus       459 ~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~-----------vEtl~i~sd---vl  524 (893)
T KOG0291|consen  459 EIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT-----------VETLEIRSD---VL  524 (893)
T ss_pred             EEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCce-----------eeeEeeccc---ee
Confidence                   2223455678999999999998  889999999999999998654221           334433222   45


Q ss_pred             EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee--------------EEEeccccccceeeeEEccCCceeeC
Q psy10348        231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF--------------QILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+++.|+|+-||+++.||.|.+||...+.....+.              .+-+........+.+++|+||+.|+|
T Consensus       525 ~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlA  599 (893)
T KOG0291|consen  525 AVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILA  599 (893)
T ss_pred             EEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEe
Confidence            66777889999999999999999998765331110              11111123457899999999999875

>KOG0266|consensus

Probab=100.00  E-value=2.9e-34  Score=233.29  Aligned_cols=228  Identities=22%  Similarity=0.332  Sum_probs=189.5

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      +...|.++.|++++.    .+++++.++.+++|+..+.+  .++.+.+|...|..++|+| ++.++++++.|++|++||+
T Consensus       158 ~~~sv~~~~fs~~g~----~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~-d~~~l~s~s~D~tiriwd~  232 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGR----ALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSP-DGSYLLSGSDDKTLRIWDL  232 (456)
T ss_pred             ccCceEEEEEcCCCC----eEEEccCCCcEEEeecccccchhhccccccccceeeeEECC-CCcEEEEecCCceEEEeec
Confidence            468899999999995    89999999999999998777  7777789999999999999 9999999999999999999


Q ss_pred             -CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         87 -KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        87 -~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                       ..+..++.+   .+|...|++++|+|+++++++|+.|++|++||++++++...+.                        
T Consensus       233 ~~~~~~~~~l---~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~------------------------  285 (456)
T KOG0266|consen  233 KDDGRNLKTL---KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLK------------------------  285 (456)
T ss_pred             cCCCeEEEEe---cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeee------------------------
Confidence             455788888   7999999999999999999999999999999999988776664                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc--EEEEEEEecCCCcEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE--IWFIRFSMDYWQKIL  241 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~l  241 (291)
                          +|...|++++|+  +++|++++.|+.|++||+.++...          ++..+..+...  +..++  ++|++.++
T Consensus       286 ----~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~----------~~~~~~~~~~~~~~~~~~--fsp~~~~l  349 (456)
T KOG0266|consen  286 ----GHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKL----------CLKLLSGAENSAPVTSVQ--FSPNGKYL  349 (456)
T ss_pred             ----ccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCcee----------eeecccCCCCCCceeEEE--ECCCCcEE
Confidence                599999999998  789999999999999999988621          23444444433  55544  45779999


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEecccccc---ceeeeEEccCCceee
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS---AVRQTTLSKNGNVLL  290 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~g~~l~  290 (291)
                      ++++.|+.+++||+..+..+.    ..  .+|..   .+.+...++.|++++
T Consensus       350 l~~~~d~~~~~w~l~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~i~  395 (456)
T KOG0266|consen  350 LSASLDRTLKLWDLRSGKSVG----TY--TGHSNLVRCIFSPTLSTGGKLIY  395 (456)
T ss_pred             EEecCCCeEEEEEccCCccee----ee--cccCCcceeEecccccCCCCeEE
Confidence            999999999999999886432    12  23332   444555577777765

>KOG0292|consensus

Probab=100.00  E-value=1.4e-34  Score=234.52  Aligned_cols=258  Identities=17%  Similarity=0.273  Sum_probs=207.9

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|+++|+.+.|+|..    +++++||.|-.|+||+..+.+++.++.+|-+.|..+.|++ .-.++++++.|.+|+||+.
T Consensus        48 deHdGpVRgv~FH~~q----plFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNw  122 (1202)
T KOG0292|consen   48 DEHDGPVRGVDFHPTQ----PLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNW  122 (1202)
T ss_pred             hccCCccceeeecCCC----CeEEecCCccEEEEEecccceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEec
Confidence            3689999999999999    5999999999999999999999999999999999999999 8899999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc--cCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE--HFPQ  164 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  164 (291)
                      .+++++..+   .+|+..|.|.+|+|....+++++.|.+|||||+...+....-.....-...+..... .+-+  ....
T Consensus       123 qsr~~iavl---tGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~-dLfg~~DaVV  198 (1202)
T KOG0292|consen  123 QSRKCIAVL---TGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNS-DLFGQTDAVV  198 (1202)
T ss_pred             cCCceEEEE---ecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccch-hhcCCcCeee
Confidence            999999999   899999999999999999999999999999999765543322221111111111000 0111  1112


Q ss_pred             cccccccCcceeEEEEcC--CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        165 FSTRDIHRNYVDCVRWLG--DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                      -..+++|...|+-++|++  .++++|+.|..|++|.+...+..          .+.+..+|...|.++-|.  |....++
T Consensus       199 K~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaW----------EvDtcrgH~nnVssvlfh--p~q~lIl  266 (1202)
T KOG0292|consen  199 KHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW----------EVDTCRGHYNNVSSVLFH--PHQDLIL  266 (1202)
T ss_pred             eeeecccccccceEEecCCcceEEecCCcceeeEEEeccccce----------eehhhhcccCCcceEEec--CccceeE
Confidence            345678999999999996  69999999999999998765442          256677888888877665  5589999


Q ss_pred             EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        243 VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.+.|++|+|||+...+.+    ..+.  ......+.++-+|..+++|+
T Consensus       267 SnsEDksirVwDm~kRt~v----~tfr--rendRFW~laahP~lNLfAA  309 (1202)
T KOG0292|consen  267 SNSEDKSIRVWDMTKRTSV----QTFR--RENDRFWILAAHPELNLFAA  309 (1202)
T ss_pred             ecCCCccEEEEecccccce----eeee--ccCCeEEEEEecCCcceeee
Confidence            9999999999999998654    3333  33467888999998888775

>KOG0281|consensus

Probab=100.00  E-value=3.9e-36  Score=219.95  Aligned_cols=223  Identities=20%  Similarity=0.320  Sum_probs=190.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|.|+.|..      +.+++|+.|.+|+|||.++++++.++-+|.+.|..+.|+.   .++++++.|.++.+||+
T Consensus       234 ~GHtGSVLCLqyd~------rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm  304 (499)
T KOG0281|consen  234 TGHTGSVLCLQYDE------RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDM  304 (499)
T ss_pred             hcCCCcEEeeeccc------eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEec
Confidence            35888999998873      4899999999999999999999999999999999999986   69999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .....+.....+.+|...|..+.|+  .+++++++.|.+|++|++.+++.++++.                         
T Consensus       305 ~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~-------------------------  357 (499)
T KOG0281|consen  305 ASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLN-------------------------  357 (499)
T ss_pred             cCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhh-------------------------
Confidence            8776555445568999999999996  5699999999999999999999877664                         


Q ss_pred             cccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        167 TRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                         +|...|-|+++.+.++++|+.|.+|++||+..+.+            +..+++|+.-|.++.|.    .+.+++|+.
T Consensus       358 ---gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~c------------LRvLeGHEeLvRciRFd----~krIVSGaY  418 (499)
T KOG0281|consen  358 ---GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC------------LRVLEGHEELVRCIRFD----NKRIVSGAY  418 (499)
T ss_pred             ---cccccceehhccCeEEEecCCCceEEEEeccccHH------------HHHHhchHHhhhheeec----Cceeeeccc
Confidence               59999999999999999999999999999999855            78889999888877664    889999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEE---EeccccccceeeeEEcc
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQI---LSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~  284 (291)
                      ||+|++||+..+...+....+   .....|++.|..++|..
T Consensus       419 DGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~  459 (499)
T KOG0281|consen  419 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE  459 (499)
T ss_pred             cceEEEEecccccCCcccccchHHHhhhhccceeEEEeecc
Confidence            999999999987654332222   22336778888888853

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=1.2e-33  Score=229.03  Aligned_cols=227  Identities=17%  Similarity=0.298  Sum_probs=173.4

Q ss_pred             eeecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348          7 LLIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKD   78 (291)
Q Consensus         7 ~~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d   78 (291)
                      ..|.+.|++++|+| ++    .+|++|+.|++|++||+.++       +.+..+.+|...|.+++|+|..+.+|++|+.|
T Consensus        72 ~GH~~~V~~v~fsP~d~----~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D  147 (493)
T PTZ00421         72 LGQEGPIIDVAFNPFDP----QKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD  147 (493)
T ss_pred             eCCCCCEEEEEEcCCCC----CEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC
Confidence            35889999999999 55    59999999999999999765       35677889999999999999445799999999


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      ++|+|||+++++.+..+   ..|...|.+++|+|++.+|++++.|+.|++||+++++.+..+.                 
T Consensus       148 gtVrIWDl~tg~~~~~l---~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~-----------------  207 (493)
T PTZ00421        148 MVVNVWDVERGKAVEVI---KCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVE-----------------  207 (493)
T ss_pred             CEEEEEECCCCeEEEEE---cCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEe-----------------
Confidence            99999999999888877   7899999999999999999999999999999999887654432                 


Q ss_pred             cccCcccccccccCcc-eeEEEEc--CCEEEEec----CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNY-VDCVRWL--GDFVLSKS----CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                                 +|... ...+.|.  ++.+++++    .|+.|++||++.....           +.....+.... ...
T Consensus       208 -----------~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p-----------~~~~~~d~~~~-~~~  264 (493)
T PTZ00421        208 -----------AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASP-----------YSTVDLDQSSA-LFI  264 (493)
T ss_pred             -----------cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCc-----------eeEeccCCCCc-eEE
Confidence                       24433 3345565  44555543    4899999999876431           33222222211 222


Q ss_pred             EEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        232 FSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       232 ~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ..+++++.+|++|+ .||.|++||+.+++..    ..... .+..++.+++|.|.
T Consensus       265 ~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~----~~~~~-~s~~~~~g~~~~pk  314 (493)
T PTZ00421        265 PFFDEDTNLLYIGSKGEGNIRCFELMNERLT----FCSSY-SSVEPHKGLCMMPK  314 (493)
T ss_pred             EEEcCCCCEEEEEEeCCCeEEEEEeeCCceE----EEeec-cCCCCCcceEeccc
Confidence            34567799999887 5999999999987532    22222 34557778888874

>KOG0318|consensus

Probab=100.00  E-value=1.2e-33  Score=216.69  Aligned_cols=262  Identities=17%  Similarity=0.193  Sum_probs=195.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe---eeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY---GHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .|.+-|+|+.|+||++    ++|+.+.||+|.+||-.+++.+..+.   +|++.|.+++|+| |+..++|++.|.+++||
T Consensus       188 ~HskFV~~VRysPDG~----~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIW  262 (603)
T KOG0318|consen  188 EHSKFVNCVRYSPDGS----RFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIW  262 (603)
T ss_pred             ccccceeeEEECCCCC----eEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECC-CCceEEEecCCceEEEE
Confidence            4678899999999995    99999999999999999999999998   8999999999999 99999999999999999


Q ss_pred             ECCCcceeeeec----------------------------------------cccCCCCceEEEEEccCCCEEEEEecCC
Q psy10348         85 NIKTDICIAIFG----------------------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDH  124 (291)
Q Consensus        85 d~~~~~~~~~~~----------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~  124 (291)
                      |+.++++++++.                                        .+.+|...|+++..+|++.+|++|+.||
T Consensus       263 dVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG  342 (603)
T KOG0318|consen  263 DVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG  342 (603)
T ss_pred             EeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc
Confidence            998765544431                                        1588999999999999999999999999


Q ss_pred             cEEEEeccCchhhhhhcc-------ccccCCC---------Cc-------------c--ccccCc-------ccc-----
Q psy10348        125 SLKLWDLTKPEIKDACAE-------SYTFNPA---------RS-------------T--RPFDTQ-------KEH-----  161 (291)
Q Consensus       125 ~i~v~d~~~~~~~~~~~~-------~~~~~~~---------~~-------------~--~~~~~~-------~~~-----  161 (291)
                      .|.-||..++..-+....       .+.....         ..             .  ..+...       ...     
T Consensus       343 ~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv  422 (603)
T KOG0318|consen  343 HINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVV  422 (603)
T ss_pred             eEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEE
Confidence            999999988765432210       0000000         00             0  000000       000     


Q ss_pred             --Cccccccccc--------CcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348        162 --FPQFSTRDIH--------RNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       162 --~~~~~~~~~~--------~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                        ...+..+..+        .-...+++.+  ++.++.|+.|+.|++|.+.....          ........|..+++.
T Consensus       423 ~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l----------~ee~~~~~h~a~iT~  492 (603)
T KOG0318|consen  423 ACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDEL----------KEEAKLLEHRAAITD  492 (603)
T ss_pred             EecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcc----------cceeeeecccCCceE
Confidence              0000000101        1123456666  77999999999999999987653          123445567788887


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++  ||+.|||+|...+.+.+||+.+.+.     ..-...-|...|++++|+|+.+++|+
T Consensus       493 vayS--pd~~yla~~Da~rkvv~yd~~s~~~-----~~~~w~FHtakI~~~aWsP~n~~vAT  547 (603)
T KOG0318|consen  493 VAYS--PDGAYLAAGDASRKVVLYDVASREV-----KTNRWAFHTAKINCVAWSPNNKLVAT  547 (603)
T ss_pred             EEEC--CCCcEEEEeccCCcEEEEEcccCce-----ecceeeeeeeeEEEEEeCCCceEEEe
Confidence            7766  5599999999999999999999864     33333358899999999999999885

>KOG0277|consensus

Probab=100.00  E-value=3.7e-35  Score=205.82  Aligned_cols=229  Identities=21%  Similarity=0.351  Sum_probs=195.0

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      +..-++.++.++|+++-+   ..+++++.||.+++||+.. ..+++.++.|+.+|.++.|++.+...+++++.|++|++|
T Consensus        56 s~d~~D~LfdV~Wse~~e---~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW  132 (311)
T KOG0277|consen   56 SYDTEDGLFDVAWSENHE---NQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLW  132 (311)
T ss_pred             eeecccceeEeeecCCCc---ceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEee
Confidence            344578999999999876   7999999999999999643 357889999999999999999888999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      +...++.+.++   .+|..-|...+|+|. .+.+++++.|+.+++||++.......                        
T Consensus       133 ~~~r~~Sv~Tf---~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~------------------------  185 (311)
T KOG0277|consen  133 DPNRPNSVQTF---NGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS------------------------  185 (311)
T ss_pred             cCCCCcceEee---cCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE------------------------
Confidence            99999999998   899999999999996 66899999999999999987542222                        


Q ss_pred             ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                          ...|...|.++.|+   .+.++||+.|+.|+.||+++.+.           ++..+.+|.-.|..++++|+. ...
T Consensus       186 ----i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~-----------pl~eL~gh~~AVRkvk~Sph~-~~l  249 (311)
T KOG0277|consen  186 ----IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT-----------PLFELNGHGLAVRKVKFSPHH-ASL  249 (311)
T ss_pred             ----EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccc-----------cceeecCCceEEEEEecCcch-hhH
Confidence                23588899999998   67999999999999999998864           388889999999999988864 678


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ||+++.|=++++||...+....   .  ....|+.-|..+.||+-
T Consensus       250 LaSasYDmT~riw~~~~~ds~~---e--~~~~HtEFv~g~Dws~~  289 (311)
T KOG0277|consen  250 LASASYDMTVRIWDPERQDSAI---E--TVDHHTEFVCGLDWSLF  289 (311)
T ss_pred             hhhccccceEEecccccchhhh---h--hhhccceEEeccccccc
Confidence            9999999999999998765321   1  22257778888999884

>KOG0645|consensus

Probab=100.00  E-value=2.7e-33  Score=198.13  Aligned_cols=222  Identities=22%  Similarity=0.412  Sum_probs=180.5

Q ss_pred             eecceeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCc---ceeEEE-eeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFH---ACVRHF-YGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      .|.+++..++|+|- +    ..||+++.|+.||+|+...+   .+...+ .+|+..|.+++|+| .+++|++|+.|.++.
T Consensus        12 gh~~r~W~~awhp~~g----~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp-~g~~La~aSFD~t~~   86 (312)
T KOG0645|consen   12 GHKDRVWSVAWHPGKG----VILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSP-HGRYLASASFDATVV   86 (312)
T ss_pred             CCCCcEEEEEeccCCc----eEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecC-CCcEEEEeeccceEE
Confidence            56788999999998 6    48999999999999998743   333334 37999999999999 999999999999999


Q ss_pred             EEECCCc--ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         83 LWNIKTD--ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        83 vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      ||.-..+  +++..+   .+|..+|.|++|+++|.+||+++.|++|-||.+..+..                        
T Consensus        87 Iw~k~~~efecv~~l---EGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE------------------------  139 (312)
T KOG0645|consen   87 IWKKEDGEFECVATL---EGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE------------------------  139 (312)
T ss_pred             EeecCCCceeEEeee---eccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc------------------------
Confidence            9986644  455555   89999999999999999999999999999999885442                        


Q ss_pred             cCcccccccccCcceeEEEEcC--CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWLG--DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                       +.....++.|...|..+.|++  ++|++++.|++|++|+-......         .++.++.+|...++++.|.  +.|
T Consensus       140 -fec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW---------~c~~tl~g~~~TVW~~~F~--~~G  207 (312)
T KOG0645|consen  140 -FECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDW---------ECVQTLDGHENTVWSLAFD--NIG  207 (312)
T ss_pred             -EEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCe---------eEEEEecCccceEEEEEec--CCC
Confidence             223344566999999999995  79999999999999987633332         5688999999888887766  559


Q ss_pred             cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      ..|++++.|++++||.+.+.-.       .   .|..++..++|.
T Consensus       208 ~rl~s~sdD~tv~Iw~~~~~~~-------~---~~sr~~Y~v~W~  242 (312)
T KOG0645|consen  208 SRLVSCSDDGTVSIWRLYTDLS-------G---MHSRALYDVPWD  242 (312)
T ss_pred             ceEEEecCCcceEeeeeccCcc-------h---hcccceEeeeec
Confidence            9999999999999999764311       0   234566666666

>KOG0281|consensus

Probab=100.00  E-value=1e-35  Score=217.69  Aligned_cols=215  Identities=20%  Similarity=0.376  Sum_probs=187.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ..+.|+|+.+.-      ..+++|..|++|+|||.++-.+++.+.+|++.|.|+.|..   +.+++|+.|.+|++||+++
T Consensus       196 ~skgVYClQYDD------~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~---rviisGSSDsTvrvWDv~t  266 (499)
T KOG0281|consen  196 NSKGVYCLQYDD------EKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE---RVIVSGSSDSTVRVWDVNT  266 (499)
T ss_pred             cCCceEEEEecc------hhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc---eEEEecCCCceEEEEeccC
Confidence            357788888763      3899999999999999999999999999999999999975   6999999999999999999


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      |+++.++   -+|...|..+.|+  +.++++++.|.++.+||+.....+...                         ..+
T Consensus       267 ge~l~tl---ihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~r-------------------------rVL  316 (499)
T KOG0281|consen  267 GEPLNTL---IHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLR-------------------------RVL  316 (499)
T ss_pred             CchhhHH---hhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHH-------------------------HHH
Confidence            9999988   7999999999997  569999999999999999876633211                         223


Q ss_pred             cccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       169 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      .+|.+.|+.+.|+.+++++++.|.+|++|++.+.+.            +.++.+|...|.++.+.    ++++++|+.|.
T Consensus       317 vGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~ef------------vRtl~gHkRGIAClQYr----~rlvVSGSSDn  380 (499)
T KOG0281|consen  317 VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEF------------VRTLNGHKRGIACLQYR----DRLVVSGSSDN  380 (499)
T ss_pred             hhhhhheeeeccccceEEEecCCceEEEEeccceee------------ehhhhcccccceehhcc----CeEEEecCCCc
Confidence            469999999999999999999999999999999854            89999999988776654    99999999999


Q ss_pred             cEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                      +|++||+..+.++    ..++  +|+.-|.++.|..
T Consensus       381 tIRlwdi~~G~cL----RvLe--GHEeLvRciRFd~  410 (499)
T KOG0281|consen  381 TIRLWDIECGACL----RVLE--GHEELVRCIRFDN  410 (499)
T ss_pred             eEEEEeccccHHH----HHHh--chHHhhhheeecC
Confidence            9999999999654    3443  7888999999864

>KOG0295|consensus

Probab=100.00  E-value=4.1e-34  Score=209.93  Aligned_cols=228  Identities=23%  Similarity=0.371  Sum_probs=201.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|.+.+.+++|+..+    +++|+++.|=.+.+||.++ -++++.+.+|+..|.+++|-| .+.++++++.|.+|+.|++
T Consensus       148 GHt~sv~di~~~a~G----k~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~  222 (406)
T KOG0295|consen  148 GHTDSVFDISFDASG----KYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWEC  222 (406)
T ss_pred             ccccceeEEEEecCc----cEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEec
Confidence            477889999999998    6999999998899999986 567888889999999999999 8899999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .+|-++..+   .+|...|..++.+.||..+++++.|.++++|-+.++++...+..                        
T Consensus       223 ~tg~cv~t~---~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~------------------------  275 (406)
T KOG0295|consen  223 DTGYCVKTF---PGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE------------------------  275 (406)
T ss_pred             ccceeEEec---cCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhc------------------------
Confidence            999999999   89999999999999999999999999999999999987766543                        


Q ss_pred             cccccCcceeEEEEc-----------------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348        167 TRDIHRNYVDCVRWL-----------------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                          |+.+|.+++|.                 +.++.+++.|++|++||+.++.            ++.++.+|...|..
T Consensus       276 ----hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~------------cL~tL~ghdnwVr~  339 (406)
T KOG0295|consen  276 ----HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM------------CLFTLVGHDNWVRG  339 (406)
T ss_pred             ----cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe------------EEEEEecccceeee
Confidence                77777777772                 2489999999999999999994            48999999998887


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|.  |.|+||+++.+|+++++||+++.+++    ..+.  .|..-|++++|+.+..++++
T Consensus       340 ~af~--p~Gkyi~ScaDDktlrvwdl~~~~cm----k~~~--ah~hfvt~lDfh~~~p~VvT  393 (406)
T KOG0295|consen  340 VAFS--PGGKYILSCADDKTLRVWDLKNLQCM----KTLE--AHEHFVTSLDFHKTAPYVVT  393 (406)
T ss_pred             eEEc--CCCeEEEEEecCCcEEEEEeccceee----eccC--CCcceeEEEecCCCCceEEe
Confidence            7666  55999999999999999999998754    3333  67789999999998887764

>KOG0296|consensus

Probab=100.00  E-value=2.6e-33  Score=205.79  Aligned_cols=240  Identities=12%  Similarity=0.177  Sum_probs=184.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|++++.+|+.    +++|||+.|....+|++.+++....+.+|++.|+++.|+. ++.+||||+.+|.|+||+.
T Consensus        61 ~~H~~svFavsl~P~~----~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v~v~~~  135 (399)
T KOG0296|consen   61 DKHTDSVFAVSLHPNN----NLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSH-DGTLLATGDMSGKVLVFKV  135 (399)
T ss_pred             hhcCCceEEEEeCCCC----ceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEcc-CceEEEecCCCccEEEEEc
Confidence            4689999999999976    5999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .++.....+   ......|.-+.|+|.+..|+.|+.||.+-+|.+.++...+.+.                         
T Consensus       136 stg~~~~~~---~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~-------------------------  187 (399)
T KOG0296|consen  136 STGGEQWKL---DQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMS-------------------------  187 (399)
T ss_pred             ccCceEEEe---ecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEec-------------------------
Confidence            999988887   4677889999999999999999999999999999875554443                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC-------------------------------CCc
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN-------------------------------ETN  213 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------------------------------~~~  213 (291)
                         +|..++++=.|.  |+.++++..||+|++|++.++.+......                               ...
T Consensus       188 ---Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~s  264 (399)
T KOG0296|consen  188 ---GHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGS  264 (399)
T ss_pred             ---CCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEcccc
Confidence               355555554444  44555555555555555554433300000                               000


Q ss_pred             e----------------------------------------------------eeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        214 V----------------------------------------------------TIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       214 ~----------------------------------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                      .                                                    ..++....|..+|..  +.|.+ ..+|
T Consensus       265 gKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~--l~w~~-t~~l  341 (399)
T KOG0296|consen  265 GKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTK--LKWLN-TDYL  341 (399)
T ss_pred             ceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEE--EEEcC-cchh
Confidence            0                                                    012223334444443  44444 5899


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++.||.|+.||.++++      ..+.+.+|...|.+++.+|+++++++
T Consensus       342 ~t~c~~g~v~~wDaRtG~------l~~~y~GH~~~Il~f~ls~~~~~vvT  385 (399)
T KOG0296|consen  342 LTACANGKVRQWDARTGQ------LKFTYTGHQMGILDFALSPQKRLVVT  385 (399)
T ss_pred             eeeccCceEEeeeccccc------eEEEEecCchheeEEEEcCCCcEEEE
Confidence            999999999999999995      34445599999999999999999874

>KOG0645|consensus

Probab=100.00  E-value=3.9e-33  Score=197.30  Aligned_cols=233  Identities=17%  Similarity=0.228  Sum_probs=184.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|++++|+|.+    ++||+|+.|.++.||.-..+  +++..+++|+..|.+++|++ +|++||+++.|..|-||.
T Consensus        59 ~hkrsVRsvAwsp~g----~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe  133 (312)
T KOG0645|consen   59 GHKRSVRSVAWSPHG----RYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWE  133 (312)
T ss_pred             cchheeeeeeecCCC----cEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEE
Confidence            489999999999999    59999999999999986644  67899999999999999999 999999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +..+........+++|...|..+.|+|...+|++++.|.+|++|+-..+.-                         ....
T Consensus       134 ~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~ddd-------------------------W~c~  188 (312)
T KOG0645|consen  134 IDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDD-------------------------WECV  188 (312)
T ss_pred             ecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCC-------------------------eeEE
Confidence            987766665555699999999999999999999999999999998763210                         1122


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .++++|...|.+++|+  |+.|++++.|++++||.....-.                ..|...++.+.+.    ...||+
T Consensus       189 ~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~----------------~~~sr~~Y~v~W~----~~~IaS  248 (312)
T KOG0645|consen  189 QTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLS----------------GMHSRALYDVPWD----NGVIAS  248 (312)
T ss_pred             EEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcc----------------hhcccceEeeeec----ccceEe
Confidence            3345688999999998  88999999999999998654311                1233445555554    578999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEE-eccccccceeeeEEccC-Cceee
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQIL-SHPRCMSAVRQTTLSKN-GNVLL  290 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~-g~~l~  290 (291)
                      ++.|+.|++|.-...-......... ....|...|++++|.|. .+.|+
T Consensus       249 ~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~  297 (312)
T KOG0645|consen  249 GGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLA  297 (312)
T ss_pred             ccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCcee
Confidence            9999999999877431111111111 23478889999999994 44444

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=9.2e-33  Score=239.98  Aligned_cols=244  Identities=18%  Similarity=0.272  Sum_probs=192.9

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .+.+...+.+++|++...   .+||+++.||+|++||+.+++.+..+.+|.+.|++++|+|.++.+|++|+.||.|++||
T Consensus       528 ~~~~~~~v~~l~~~~~~~---~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd  604 (793)
T PLN00181        528 ELASRSKLSGICWNSYIK---SQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS  604 (793)
T ss_pred             EecccCceeeEEeccCCC---CEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence            344567889999998643   59999999999999999999999999999999999999976789999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEc-cCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFD-LLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++++..+..+   . +...+.++.|+ +++.+|++|+.||.|++||++..+..                           
T Consensus       605 ~~~~~~~~~~---~-~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~---------------------------  653 (793)
T PLN00181        605 INQGVSIGTI---K-TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLP---------------------------  653 (793)
T ss_pred             CCCCcEEEEE---e-cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCcc---------------------------
Confidence            9998888777   3 34689999995 56899999999999999999875421                           


Q ss_pred             cccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .....+|...|.++.|. +.++++++.|++|++||++.....      .....+..+.+|...+..+.++  |++.+|++
T Consensus       654 ~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~------~~~~~l~~~~gh~~~i~~v~~s--~~~~~las  725 (793)
T PLN00181        654 LCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISG------INETPLHSFMGHTNVKNFVGLS--VSDGYIAT  725 (793)
T ss_pred             ceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccc------cCCcceEEEcCCCCCeeEEEEc--CCCCEEEE
Confidence            11123588899999997 789999999999999999753210      0113467788888888877665  55999999


Q ss_pred             EcCCCcEEEEEcCCCCCCccee-------EEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKF-------QILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+.||.|++|+.....+.....       ..+....+...|.+++|+|++..|++
T Consensus       726 gs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva  780 (793)
T PLN00181        726 GSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVA  780 (793)
T ss_pred             EeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEE
Confidence            9999999999987654221000       00111245567999999999998875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.2e-32  Score=239.15  Aligned_cols=232  Identities=15%  Similarity=0.181  Sum_probs=186.8

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----c----eeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----A----CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      |...|.+++|+|++    .++|+|+.|+.|+||+..+.    .    ....+. +...+.+++|++..+.+|++++.||+
T Consensus       482 ~~~~V~~i~fs~dg----~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~  556 (793)
T PLN00181        482 SSNLVCAIGFDRDG----EFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV  556 (793)
T ss_pred             CCCcEEEEEECCCC----CEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence            78899999999998    49999999999999997532    1    122333 35679999999866789999999999


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      |++||+.+++.+..+   .+|...|++++|+| ++.+|++|+.|+.|++||++++..+..+.                  
T Consensus       557 v~lWd~~~~~~~~~~---~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~------------------  615 (793)
T PLN00181        557 VQVWDVARSQLVTEM---KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK------------------  615 (793)
T ss_pred             EEEEECCCCeEEEEe---cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe------------------
Confidence            999999998888887   79999999999997 68899999999999999999876554332                  


Q ss_pred             ccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                                 +...+.++.|.   +.+|++|+.|+.|++||++....           .+..+.+|...|..+.|.   
T Consensus       616 -----------~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~-----------~~~~~~~h~~~V~~v~f~---  670 (793)
T PLN00181        616 -----------TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL-----------PLCTMIGHSKTVSYVRFV---  670 (793)
T ss_pred             -----------cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc-----------cceEecCCCCCEEEEEEe---
Confidence                       33468889884   77999999999999999987542           255667888888888774   


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.+|++++.|++|++||+................+|...+..++|+|++++|++
T Consensus       671 ~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~las  725 (793)
T PLN00181        671 DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIAT  725 (793)
T ss_pred             CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEE
Confidence            3789999999999999999854211011122334478889999999999999875

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=1.5e-32  Score=223.81  Aligned_cols=227  Identities=12%  Similarity=0.201  Sum_probs=169.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--------eeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--------CVRHFYGHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      .|.+.|.+++|+|+..   .+||+|+.||+|+|||+.++.        ++..+.+|...|.+++|+|....+|++++.|+
T Consensus        72 gH~~~V~~lafsP~~~---~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg  148 (568)
T PTZ00420         72 GHTSSILDLQFNPCFS---EILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS  148 (568)
T ss_pred             CCCCCEEEEEEcCCCC---CEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC
Confidence            4789999999999732   599999999999999997542        34567889999999999994334568999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      +|++||+++++....+    .|...|.+++|+|+|.+|++++.|+.|++||+++++.+..+.                  
T Consensus       149 tIrIWDl~tg~~~~~i----~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~------------------  206 (568)
T PTZ00420        149 FVNIWDIENEKRAFQI----NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFH------------------  206 (568)
T ss_pred             eEEEEECCCCcEEEEE----ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEe------------------
Confidence            9999999998877666    356789999999999999999999999999999988655443                  


Q ss_pred             ccCcccccccccCcceeE-----EEEc--CCEEEEecCCC----eEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        160 EHFPQFSTRDIHRNYVDC-----VRWL--GDFVLSKSCEN----CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~-----~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                +|.+.+.+     ..|+  +++|++++.|+    .|++||++.....           +..+..+.. ..
T Consensus       207 ----------gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~p-----------l~~~~ld~~-~~  264 (568)
T PTZ00420        207 ----------IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSA-----------LVTMSIDNA-SA  264 (568)
T ss_pred             ----------cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCc-----------eEEEEecCC-cc
Confidence                      35554332     2233  56888877664    7999999864321           333322221 11


Q ss_pred             EEEEEe-cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        229 FIRFSM-DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       229 ~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                      .+...+ .+++.++++|+.|+.|++|++..+.     ...+....+..++.+++|.|+.
T Consensus       265 ~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~-----~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        265 PLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS-----IRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             ceEEeeeCCCCCEEEEEECCCeEEEEEccCCc-----EEeecccccCCCccceEEcccc
Confidence            222222 3458899999999999999998753     1333333466788999999964

>KOG1407|consensus

Probab=100.00  E-value=3.4e-33  Score=196.69  Aligned_cols=253  Identities=17%  Similarity=0.273  Sum_probs=202.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|..++.+++|+.++.    .|++|+.|+++++|+++..+....  ..+|.+.|-.++|+|..+.+|++++.|.+|++||
T Consensus        18 ~~~~~v~Sv~wn~~g~----~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   18 GHVQKVHSVAWNCDGT----KLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             hhhhcceEEEEcccCc----eeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            4678899999999994    999999999999999987765543  4589999999999998999999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----ccccCCCCccccccCc--
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----SYTFNPARSTRPFDTQ--  158 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--  158 (291)
                      ++.+++...+    ..+..-.-+.|+|+|.+++.++.|..|.+.|.++.+.....+.     ...++.. +...+.+.  
T Consensus        94 ~r~~k~~~~i----~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~-nd~Fflt~Gl  168 (313)
T KOG1407|consen   94 IRSGKCTARI----ETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNS-NDLFFLTNGL  168 (313)
T ss_pred             eccCcEEEEe----eccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCC-CCEEEEecCC
Confidence            9999999887    3334444588999999999999999999999998877655442     2222211 11111111  


Q ss_pred             -------cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348        159 -------KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       159 -------~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                             -....+....++|...+.|+.|+  |++|++|+.|..+.+||+...-+            ++.+....-+|..
T Consensus       169 G~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC------------~R~isRldwpVRT  236 (313)
T KOG1407|consen  169 GCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELIC------------ERCISRLDWPVRT  236 (313)
T ss_pred             ceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhh------------heeeccccCceEE
Confidence                   11344566778999999999998  88999999999999999988755            6677777777877


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.|+.+  |++||+|+.|..|-|=+++++..+      .+ -.+.++...++|+|...+||
T Consensus       237 lSFS~d--g~~lASaSEDh~IDIA~vetGd~~------~e-I~~~~~t~tVAWHPk~~LLA  288 (313)
T KOG1407|consen  237 LSFSHD--GRMLASASEDHFIDIAEVETGDRV------WE-IPCEGPTFTVAWHPKRPLLA  288 (313)
T ss_pred             EEeccC--cceeeccCccceEEeEecccCCeE------EE-eeccCCceeEEecCCCceee
Confidence            777655  999999999999999999999632      22 24678999999999988876

>KOG0276|consensus

Probab=100.00  E-value=1.3e-33  Score=220.98  Aligned_cols=200  Identities=22%  Similarity=0.431  Sum_probs=179.0

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +.+|+++.|-+..+    .+++|+.|..||||+..+++.+..|.+|.+.|.+++.+| ...+++|++.|-.|++||.+..
T Consensus        55 ~~PvRa~kfiaRkn----Wiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~  129 (794)
T KOG0276|consen   55 EVPVRAAKFIARKN----WIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENE  129 (794)
T ss_pred             ccchhhheeeeccc----eEEEecCCceEEEEecccceeeEEeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCc
Confidence            67889999988874    999999999999999999999999999999999999999 7789999999999999999854


Q ss_pred             -ceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         90 -ICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        90 -~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                       .+.+.+   .+|...|.+++|+|. .+.|++++.|++|++|.+.+..+..++                           
T Consensus       130 wa~~qtf---eGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl---------------------------  179 (794)
T KOG0276|consen  130 WACEQTF---EGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTL---------------------------  179 (794)
T ss_pred             eeeeeEE---cCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceee---------------------------
Confidence             456667   899999999999995 569999999999999999887765554                           


Q ss_pred             ccccCcceeEEEEc-CC---EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        168 RDIHRNYVDCVRWL-GD---FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       168 ~~~~~~~v~~~~~~-~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                       ++|...|+|+.|. +.   +|++|+.|.++++||.++..+            ++++.+|...|..+.+.  |.-.++++
T Consensus       180 -~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C------------V~TLeGHt~Nvs~v~fh--p~lpiiis  244 (794)
T KOG0276|consen  180 -EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC------------VQTLEGHTNNVSFVFFH--PELPIIIS  244 (794)
T ss_pred             -eccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH------------HHHhhcccccceEEEec--CCCcEEEE
Confidence             4699999999997 33   999999999999999999855            89999999998877665  55899999


Q ss_pred             EcCCCcEEEEEcCCCC
Q psy10348        244 GNQSGRTYVWDLDVQD  259 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~  259 (291)
                      |+.||++|+|+-.+-+
T Consensus       245 gsEDGTvriWhs~Ty~  260 (794)
T KOG0276|consen  245 GSEDGTVRIWNSKTYK  260 (794)
T ss_pred             ecCCccEEEecCccee
Confidence            9999999999988764

>KOG0310|consensus

Probab=100.00  E-value=3.3e-33  Score=212.40  Aligned_cols=224  Identities=21%  Similarity=0.326  Sum_probs=187.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      .+.++++.|..||    +++|+|...|.|+|||..+...++.+++|+.+|..+.|+|+++..|++|+.|+.+++||+.+.
T Consensus        68 k~~v~s~~fR~DG----~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a  143 (487)
T KOG0310|consen   68 KDVVYSVDFRSDG----RLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA  143 (487)
T ss_pred             ccceeEEEeecCC----eEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc
Confidence            4667888888888    699999999999999987777888999999999999999999999999999999999999988


Q ss_pred             ceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      .....+   .+|++.|+|.+|+|.. ..+++|+.||.|++||++.. ..+.++.                          
T Consensus       144 ~v~~~l---~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln--------------------------  194 (487)
T KOG0310|consen  144 YVQAEL---SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN--------------------------  194 (487)
T ss_pred             EEEEEe---cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec--------------------------
Confidence            764455   8999999999999964 48899999999999999987 3333332                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                         |..+|..+.+-  |..+++++ ...+++||+-++...           +..+..|...|++++++-+  +..|++|+
T Consensus       195 ---hg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~ql-----------l~~~~~H~KtVTcL~l~s~--~~rLlS~s  257 (487)
T KOG0310|consen  195 ---HGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQL-----------LTSMFNHNKTVTCLRLASD--STRLLSGS  257 (487)
T ss_pred             ---CCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCcee-----------hhhhhcccceEEEEEeecC--CceEeecc
Confidence               89999999997  56777766 789999999876542           5555568888999988864  89999999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      -|+.|++||+.+.+    ....+.   ..++|.+++.+|+++.++
T Consensus       258 LD~~VKVfd~t~~K----vv~s~~---~~~pvLsiavs~dd~t~v  295 (487)
T KOG0310|consen  258 LDRHVKVFDTTNYK----VVHSWK---YPGPVLSIAVSPDDQTVV  295 (487)
T ss_pred             cccceEEEEccceE----EEEeee---cccceeeEEecCCCceEE
Confidence            99999999977763    223343   456999999999998876

>KOG0275|consensus

Probab=100.00  E-value=6.4e-34  Score=206.84  Aligned_cols=246  Identities=17%  Similarity=0.211  Sum_probs=199.4

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE--------eeeccceeEEEEecCCCcEEEEee
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF--------YGHGHAINELKFHPQDFNLLLSVS   76 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~s~~   76 (291)
                      +.+.....+.|..||||+    ++|++|+.||.|.+||..+|+..+.+        --+..+|.|+.|+. |..++|+|+
T Consensus       208 IKFg~KSh~EcA~FSPDg----qyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSR-DsEMlAsGs  282 (508)
T KOG0275|consen  208 IKFGQKSHVECARFSPDG----QYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSR-DSEMLASGS  282 (508)
T ss_pred             eecccccchhheeeCCCC----ceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecc-cHHHhhccC
Confidence            445566778899999999    59999999999999999998765443        34678999999999 889999999


Q ss_pred             cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        77 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      .||.|++|.+++|.+++.|.  ..|...|+|+.|+.|+..+++++.|.++++.-+.+|++++.+.               
T Consensus       283 qDGkIKvWri~tG~ClRrFd--rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfr---------------  345 (508)
T KOG0275|consen  283 QDGKIKVWRIETGQCLRRFD--RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFR---------------  345 (508)
T ss_pred             cCCcEEEEEEecchHHHHhh--hhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhc---------------
Confidence            99999999999999999985  5899999999999999999999999999999999999988875               


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC-C----------------------
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN-E----------------------  211 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~----------------------  211 (291)
                                   +|...|+...|.  |.++++++.||+|++|+..+.++...... .                      
T Consensus       346 -------------GHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN  412 (508)
T KOG0275|consen  346 -------------GHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN  412 (508)
T ss_pred             -------------CccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence                         599999999998  88999999999999999988776521111 0                      


Q ss_pred             ---------CceeeeeeecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeE
Q psy10348        212 ---------TNVTIINRLNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT  281 (291)
Q Consensus       212 ---------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~  281 (291)
                               .....++++.. ....-..++.+.+|.|.++++.+.|+.++.|...+++.    ..++.  -|+..|..++
T Consensus       413 rsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~L----E~tl~--VhEkdvIGl~  486 (508)
T KOG0275|consen  413 RSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKL----ERTLP--VHEKDVIGLT  486 (508)
T ss_pred             CCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCce----eeeee--cccccccccc
Confidence                     00111222221 11222356677789999999999999999999999853    23333  5667788888


Q ss_pred             EccCCceeeC
Q psy10348        282 LSKNGNVLLC  291 (291)
Q Consensus       282 ~s~~g~~l~s  291 (291)
                      -+|..+.||+
T Consensus       487 HHPHqNllAs  496 (508)
T KOG0275|consen  487 HHPHQNLLAS  496 (508)
T ss_pred             cCcccchhhh
Confidence            8888777764

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.1e-31  Score=207.72  Aligned_cols=228  Identities=24%  Similarity=0.341  Sum_probs=190.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.++|++++|+|++    +++++++.||.|++|++.+++....+..|...+..+.|+| +++++++++.||.|++||+.
T Consensus         7 ~h~~~i~~~~~~~~~----~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200           7 GHTGGVTCVAFSPDG----KLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA-DGTYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             ccCCCEEEEEEcCCC----CEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECC-CCCEEEEEcCCCeEEEEEcC
Confidence            688999999999997    4999999999999999999888888889999999999999 77899999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++.+..+   ..|...+.++.|++++.++++++.|+.+++||+++++....+.                          
T Consensus        82 ~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------  132 (289)
T cd00200          82 TGECVRTL---TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR--------------------------  132 (289)
T ss_pred             cccceEEE---eccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEec--------------------------
Confidence            88777777   6888899999999998888888889999999998766443332                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                        .|...+.++.|+  +.++++++.|+.|++||++..+.            +..+..+...+..+.+.  |+++.+++++
T Consensus       133 --~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~------------~~~~~~~~~~i~~~~~~--~~~~~l~~~~  196 (289)
T cd00200         133 --GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC------------VATLTGHTGEVNSVAFS--PDGEKLLSSS  196 (289)
T ss_pred             --cCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccccc------------ceeEecCccccceEEEC--CCcCEEEEec
Confidence              377889999998  46777777799999999986643            55566666666665554  6688999999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .||.|++||+..++..    ..  ...|...+.+++|+|++.++++
T Consensus       197 ~~~~i~i~d~~~~~~~----~~--~~~~~~~i~~~~~~~~~~~~~~  236 (289)
T cd00200         197 SDGTIKLWDLSTGKCL----GT--LRGHENGVNSVAFSPDGYLLAS  236 (289)
T ss_pred             CCCcEEEEECCCCcee----cc--hhhcCCceEEEEEcCCCcEEEE
Confidence            9999999999886432    22  2256679999999999887763

>KOG0276|consensus

Probab=100.00  E-value=6.6e-33  Score=216.98  Aligned_cols=231  Identities=18%  Similarity=0.201  Sum_probs=208.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .+.++|-++.|+|..    +.++++-.+|.|.|||.++...++.+.-..-||.+..|-+ ..+.+++|+.|..|+||+..
T Consensus        11 ~rSdRVKsVd~HPte----Pw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnyn   85 (794)
T KOG0276|consen   11 SRSDRVKSVDFHPTE----PWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYN   85 (794)
T ss_pred             ccCCceeeeecCCCC----ceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEecc
Confidence            478999999999998    5999999999999999999999999999899999999999 88999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++.+..|   ..|.+.|++++.+|.-.++++++.|-.|++||-+..-..                           ..+
T Consensus        86 t~ekV~~F---eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~---------------------------~qt  135 (794)
T KOG0276|consen   86 TGEKVKTF---EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWAC---------------------------EQT  135 (794)
T ss_pred             cceeeEEe---eccccceeeeeecCCCCeEEecCCccEEEEeeccCceee---------------------------eeE
Confidence            99999999   799999999999999999999999999999998764321                           223


Q ss_pred             ccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        168 RDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       168 ~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                      +.+|...|.+++|+   .+.+++++-|++|++|.+.+..+            ..++++|...|+++++-+-+|..+|++|
T Consensus       136 feGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~------------nfTl~gHekGVN~Vdyy~~gdkpylIsg  203 (794)
T KOG0276|consen  136 FEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHP------------NFTLEGHEKGVNCVDYYTGGDKPYLISG  203 (794)
T ss_pred             EcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCC------------ceeeeccccCcceEEeccCCCcceEEec
Confidence            35799999999998   56999999999999999988754            7889999999999999988888999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|.+|+|||..+..|+    .+++  +|...|..+.|+|.=..+++
T Consensus       204 aDD~tiKvWDyQtk~CV----~TLe--GHt~Nvs~v~fhp~lpiiis  244 (794)
T KOG0276|consen  204 ADDLTIKVWDYQTKSCV----QTLE--GHTNNVSFVFFHPELPIIIS  244 (794)
T ss_pred             CCCceEEEeecchHHHH----HHhh--cccccceEEEecCCCcEEEE
Confidence            99999999999998765    3444  78889999999998777653

>KOG0291|consensus

Probab=100.00  E-value=2.9e-32  Score=217.48  Aligned_cols=237  Identities=18%  Similarity=0.248  Sum_probs=200.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-CeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-HTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~~~   89 (291)
                      ..++|++|++..    ..||+|=..|...+|++..-.+++.+.--..+|..+.|+. .|+.||.|+.. |.+.||++.+.
T Consensus       266 ~kvtaa~fH~~t----~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~-tGDWiA~g~~klgQLlVweWqsE  340 (893)
T KOG0291|consen  266 SKVTAAAFHKGT----NLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNS-TGDWIAFGCSKLGQLLVWEWQSE  340 (893)
T ss_pred             cceeeeeccCCc----eEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecc-cCCEEEEcCCccceEEEEEeecc
Confidence            789999999988    4999999999999999999999999987778999999999 89999998765 89999999988


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ..+...   ++|...+.+++++|||+++++|+.||.|+|||...+-+..++.+                           
T Consensus       341 sYVlKQ---QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFte---------------------------  390 (893)
T KOG0291|consen  341 SYVLKQ---QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTE---------------------------  390 (893)
T ss_pred             ceeeec---cccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEecc---------------------------
Confidence            777776   79999999999999999999999999999999999998877754                           


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccc--------------------------------cCCCcee
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELR--------------------------------TNETNVT  215 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~--------------------------------~~~~~~~  215 (291)
                       |.+.|+.+.|.  ++.+++.+-||+|+.||+...+.....                                .....++
T Consensus       391 -Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq  469 (893)
T KOG0291|consen  391 -HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ  469 (893)
T ss_pred             -CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe
Confidence             99999999998  889999999999999998665443111                                0113345


Q ss_pred             eeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        216 IINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       216 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+..+.+|.++|..++|+++  +..||+|+.|.+||+||+-.....   ..++   .+...+.+++|+|||+-|++
T Consensus       470 llDiLsGHEgPVs~l~f~~~--~~~LaS~SWDkTVRiW~if~s~~~---vEtl---~i~sdvl~vsfrPdG~elaV  537 (893)
T KOG0291|consen  470 LLDILSGHEGPVSGLSFSPD--GSLLASGSWDKTVRIWDIFSSSGT---VETL---EIRSDVLAVSFRPDGKELAV  537 (893)
T ss_pred             eeehhcCCCCcceeeEEccc--cCeEEeccccceEEEEEeeccCce---eeeE---eeccceeEEEEcCCCCeEEE
Confidence            56778899999988777755  999999999999999999876421   1233   34568999999999998873

>KOG0292|consensus

Probab=100.00  E-value=3.5e-33  Score=226.45  Aligned_cols=240  Identities=18%  Similarity=0.351  Sum_probs=207.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ...+-.++|+|..    +.++++-.+|.|.+||.+-+.++..|..|.++|..++|+| ...++++|+.|-.|+||+.++.
T Consensus         9 SsRvKglsFHP~r----PwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~r   83 (1202)
T KOG0292|consen    9 SSRVKGLSFHPKR----PWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTR   83 (1202)
T ss_pred             cccccceecCCCC----CEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccc
Confidence            5678899999998    5999999999999999999999999999999999999999 8899999999999999999999


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      +++.++   .+|-+.|+.+.|++.-.++++++.|.+|+||+..+++++..+                            .
T Consensus        84 rclftL---~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavl----------------------------t  132 (1202)
T KOG0292|consen   84 RCLFTL---LGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVL----------------------------T  132 (1202)
T ss_pred             eehhhh---ccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEE----------------------------e
Confidence            999888   899999999999999999999999999999999999977655                            4


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC-----------------CCceeeeeeecCCcccEEEE
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN-----------------ETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~i~~~  230 (291)
                      +|...|.|.+|+  .++++++|-|.+|++||+...+.....+.                 ....-.-+.+.+|...|+..
T Consensus       133 GHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwa  212 (1202)
T KOG0292|consen  133 GHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWA  212 (1202)
T ss_pred             cCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceE
Confidence            699999999999  57999999999999999976655433332                 01223345678899888887


Q ss_pred             EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|.+  .-.++++|++|..|++|.+...+-    ...-...+|.+.|.++-|+|...+|++
T Consensus       213 Afhp--TlpliVSG~DDRqVKlWrmnetKa----WEvDtcrgH~nnVssvlfhp~q~lIlS  267 (1202)
T KOG0292|consen  213 AFHP--TLPLIVSGADDRQVKLWRMNETKA----WEVDTCRGHYNNVSSVLFHPHQDLILS  267 (1202)
T ss_pred             EecC--CcceEEecCCcceeeEEEeccccc----eeehhhhcccCCcceEEecCccceeEe
Confidence            7664  489999999999999999987642    233446699999999999998887764

>KOG0283|consensus

Probab=100.00  E-value=2.2e-33  Score=226.31  Aligned_cols=232  Identities=21%  Similarity=0.309  Sum_probs=188.0

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--------------------------------c-----
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--------------------------------H-----   46 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--------------------------------~-----   46 (291)
                      ++...|.+.|.++.||+||    +|||+||+||.|+||.+..                                .     
T Consensus       261 e~~~ah~gaIw~mKFS~DG----KyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~  336 (712)
T KOG0283|consen  261 EISNAHKGAIWAMKFSHDG----KYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT  336 (712)
T ss_pred             ccccccCCcEEEEEeCCCC----ceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccc
Confidence            3445799999999999999    6999999999999998654                                0     


Q ss_pred             -----------------------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCC
Q psy10348         47 -----------------------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD  103 (291)
Q Consensus        47 -----------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  103 (291)
                                             ++++.+.+|.+.|..|.|+. + .+|++++.|.+|+||++...++++.|    .|.+
T Consensus       337 s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n-~fLLSSSMDKTVRLWh~~~~~CL~~F----~Hnd  410 (712)
T KOG0283|consen  337 SSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-N-NFLLSSSMDKTVRLWHPGRKECLKVF----SHND  410 (712)
T ss_pred             cccccccCCccccCCCccccccccchhhhhccchhheeccccc-C-CeeEeccccccEEeecCCCcceeeEE----ecCC
Confidence                                   12334678999999999997 4 79999999999999999999999998    8999


Q ss_pred             ceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhh-----hhhccccccCCCCccccccCccccCcccccc---------
Q psy10348        104 EVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIK-----DACAESYTFNPARSTRPFDTQKEHFPQFSTR---------  168 (291)
Q Consensus       104 ~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  168 (291)
                      .|+|++|+| |.++|++|+.||.+|||++...+..     +.+...+.|.|++....+.++.+.+..+.+.         
T Consensus       411 fVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~  490 (712)
T KOG0283|consen  411 FVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFH  490 (712)
T ss_pred             eeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeee
Confidence            999999999 5789999999999999999876654     3445678899998887777666554333221         


Q ss_pred             --------cccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        169 --------DIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       169 --------~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                              ..|. .|+.++|.   .+.+++.+.|..|+|+|.+....            +..|++....-.-+..+++.|
T Consensus       491 I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~l------------v~KfKG~~n~~SQ~~Asfs~D  557 (712)
T KOG0283|consen  491 IRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDL------------VHKFKGFRNTSSQISASFSSD  557 (712)
T ss_pred             EeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhh------------hhhhcccccCCcceeeeEccC
Confidence                    1233 89999998   34688889999999999976643            667776655555566677778


Q ss_pred             CcEEEEEcCCCcEEEEEcCCC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      |++|+++++|..|++|++...
T Consensus       558 gk~IVs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  558 GKHIVSASEDSWVYIWKNDSF  578 (712)
T ss_pred             CCEEEEeecCceEEEEeCCCC
Confidence            999999999999999998543

>KOG0319|consensus

Probab=100.00  E-value=1.7e-32  Score=218.15  Aligned_cols=233  Identities=16%  Similarity=0.229  Sum_probs=194.6

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ...|++.|.++.-..++    .+|++|+.|.++++|.++++    -+++...+|+..|.+++++.....+|++++.|+++
T Consensus       361 i~GH~e~vlSL~~~~~g----~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tl  436 (775)
T KOG0319|consen  361 IPGHTEAVLSLDVWSSG----DLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTL  436 (775)
T ss_pred             EeCchhheeeeeecccC----cEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceE
Confidence            44688999999844444    49999999999999977433    35566789999999999988777899999999999


Q ss_pred             EEEECCCcceee---ee---ccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccc
Q psy10348         82 RLWNIKTDICIA---IF---GGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        82 ~vwd~~~~~~~~---~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~  155 (291)
                      ++|++...+...   .+   .....|...|++++.+|+..+++||+.|++.++|+++......++               
T Consensus       437 K~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vL---------------  501 (775)
T KOG0319|consen  437 KLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVL---------------  501 (775)
T ss_pred             EEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEe---------------
Confidence            999997622111   11   122579999999999999999999999999999999977655544               


Q ss_pred             cCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                   .+|...|.++.|+  .+.++|+|.|.+|+||.+.+..            ++.++.+|.+.|.-..|.
T Consensus       502 -------------sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fS------------ClkT~eGH~~aVlra~F~  556 (775)
T KOG0319|consen  502 -------------SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFS------------CLKTFEGHTSAVLRASFI  556 (775)
T ss_pred             -------------eCCccceEEEEeccccceeEeccCCceEEEEEeccce------------eeeeecCccceeEeeeee
Confidence                         4699999999999  5699999999999999999984            499999999988776666


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      -  +++.|++++.||-|++|++.++++.    ..+  ..|+..|++++-+|++..++
T Consensus       557 ~--~~~qliS~~adGliKlWnikt~eC~----~tl--D~H~DrvWaL~~~~~~~~~~  605 (775)
T KOG0319|consen  557 R--NGKQLISAGADGLIKLWNIKTNECE----MTL--DAHNDRVWALSVSPLLDMFV  605 (775)
T ss_pred             e--CCcEEEeccCCCcEEEEeccchhhh----hhh--hhccceeEEEeecCccceeE
Confidence            4  4999999999999999999999764    333  37899999999999988765

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.1e-30  Score=202.06  Aligned_cols=228  Identities=29%  Similarity=0.410  Sum_probs=190.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...+.++.|+|++    +++++++.+|.|++|++.+++.+..+..|...+.++.|++ ++.++++++.||.|.+||+.
T Consensus        49 ~~~~~i~~~~~~~~~----~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~  123 (289)
T cd00200          49 GHTGPVRDVAASADG----TYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVE  123 (289)
T ss_pred             cCCcceeEEEECCCC----CEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECC
Confidence            466788899999998    4999999999999999998888888999999999999999 77888888889999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++....+   ..|...+.+++|+|++.++++++.|+.|++||+++++....+.                          
T Consensus       124 ~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~--------------------------  174 (289)
T cd00200         124 TGKCLTTL---RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLT--------------------------  174 (289)
T ss_pred             CcEEEEEe---ccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEe--------------------------
Confidence            88888877   6789999999999999888888889999999998776554432                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                        .|...+.++.|+  ++.+++++.|+.|++||++..+.            +..+..+...+..+.+.  |++.++++++
T Consensus       175 --~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~------------~~~~~~~~~~i~~~~~~--~~~~~~~~~~  238 (289)
T cd00200         175 --GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC------------LGTLRGHENGVNSVAFS--PDGYLLASGS  238 (289)
T ss_pred             --cCccccceEEECCCcCEEEEecCCCcEEEEECCCCce------------ecchhhcCCceEEEEEc--CCCcEEEEEc
Confidence              377789999998  44888888899999999987643            55565666666666555  5588999998


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .||.|++|++.+++..    ..+  ..|...|.+++|+|++++|++
T Consensus       239 ~~~~i~i~~~~~~~~~----~~~--~~~~~~i~~~~~~~~~~~l~~  278 (289)
T cd00200         239 EDGTIRVWDLRTGECV----QTL--SGHTNSVTSLAWSPDGKRLAS  278 (289)
T ss_pred             CCCcEEEEEcCCceeE----EEc--cccCCcEEEEEECCCCCEEEE
Confidence            8999999999876422    222  267789999999999988874

>KOG0647|consensus

Probab=100.00  E-value=8.1e-32  Score=193.48  Aligned_cols=261  Identities=15%  Similarity=0.185  Sum_probs=185.9

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-ccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .-..++.|.+++|||...   .++++++.||+||+|+++. |..+ +....|.++|.+++|+. +|..+++|+.|+.+++
T Consensus        23 ~~pP~DsIS~l~FSP~~~---~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~   98 (347)
T KOG0647|consen   23 PNPPEDSISALAFSPQAD---NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKL   98 (347)
T ss_pred             CCCcccchheeEeccccC---ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEE
Confidence            345689999999999433   5888999999999999986 3333 34457999999999998 9999999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCC--EEEEEecCCcEEEEeccCchhhhhhcc---cccc---------CCC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGT--KIMSCGMDHSLKLWDLTKPEIKDACAE---SYTF---------NPA  149 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~---------~~~  149 (291)
                      ||+.+++....    ..|.++|.++.|-+...  .|++|+.|++|+.||++...++.++.-   ....         ...
T Consensus        99 wDL~S~Q~~~v----~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata  174 (347)
T KOG0647|consen   99 WDLASGQVSQV----AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATA  174 (347)
T ss_pred             EEccCCCeeee----eecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEec
Confidence            99999966554    58999999999987665  899999999999999998887765542   0000         000


Q ss_pred             CccccccCccccCcccccc-cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc--
Q psy10348        150 RSTRPFDTQKEHFPQFSTR-DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD--  224 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--  224 (291)
                      ........+......+... ..-.-.++||+..  .+..+.|+.+|.+.+..+......          .-.+|+.|.  
T Consensus       175 ~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~----------~nFtFkCHR~~  244 (347)
T KOG0647|consen  175 ERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPK----------DNFTFKCHRST  244 (347)
T ss_pred             CCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCcc----------CceeEEEeccC
Confidence            1111111111111111111 1123457788765  556699999999999988775321          012222222  


Q ss_pred             ----ccEEEE-EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        225 ----CEIWFI-RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       225 ----~~i~~~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..|+.+ .++++|....|++++.||++.+||-....      ++...+.|..+|++.+|+.+|+++|
T Consensus       245 ~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~------kLk~s~~~~qpItcc~fn~~G~ifa  309 (347)
T KOG0647|consen  245 NSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART------KLKTSETHPQPITCCSFNRNGSIFA  309 (347)
T ss_pred             CCCCCceEEecceEeecccceEEEecCCceEEEecchhhh------hhhccCcCCCccceeEecCCCCEEE
Confidence                123332 45666779999999999999999988764      3344457788999999999999876

>KOG0285|consensus

Probab=100.00  E-value=4.4e-32  Score=199.25  Aligned_cols=193  Identities=18%  Similarity=0.283  Sum_probs=171.6

Q ss_pred             ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcE
Q psy10348         47 ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL  126 (291)
Q Consensus        47 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  126 (291)
                      ++.+.+++|.+.|.|+++.| ...+|++|+.|++++|||+.+|+....+   .+|...|..+++++...++++++.|+.|
T Consensus       142 Kl~rVi~gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~Lkltl---tGhi~~vr~vavS~rHpYlFs~gedk~V  217 (460)
T KOG0285|consen  142 KLYRVISGHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTL---TGHIETVRGVAVSKRHPYLFSAGEDKQV  217 (460)
T ss_pred             eehhhhhhccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEee---cchhheeeeeeecccCceEEEecCCCee
Confidence            34556789999999999999 7899999999999999999999999988   8999999999999999999999999999


Q ss_pred             EEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCc
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      +.||++..+.++.+.                            +|-..|.|++.+  -+.|++|+.|.++++||+++...
T Consensus       218 KCwDLe~nkvIR~Yh----------------------------GHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~  269 (460)
T KOG0285|consen  218 KCWDLEYNKVIRHYH----------------------------GHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS  269 (460)
T ss_pred             EEEechhhhhHHHhc----------------------------cccceeEEEeccccceeEEecCCcceEEEeeecccce
Confidence            999999999887765                            599999999998  67999999999999999999855


Q ss_pred             cccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        205 KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                                  +..+.+|..+|..+.+.+-  ...+++|+.|++|++||+..++.      ......|...|++++.+|
T Consensus       270 ------------V~~l~GH~~~V~~V~~~~~--dpqvit~S~D~tvrlWDl~agkt------~~tlt~hkksvral~lhP  329 (460)
T KOG0285|consen  270 ------------VHVLSGHTNPVASVMCQPT--DPQVITGSHDSTVRLWDLRAGKT------MITLTHHKKSVRALCLHP  329 (460)
T ss_pred             ------------EEEecCCCCcceeEEeecC--CCceEEecCCceEEEeeeccCce------eEeeecccceeeEEecCC
Confidence                        8999999999988877654  78999999999999999999962      223336778999999999


Q ss_pred             CCceeeC
Q psy10348        285 NGNVLLC  291 (291)
Q Consensus       285 ~g~~l~s  291 (291)
                      ....+|+
T Consensus       330 ~e~~fAS  336 (460)
T KOG0285|consen  330 KENLFAS  336 (460)
T ss_pred             chhhhhc
Confidence            8776654

>KOG0293|consensus

Probab=100.00  E-value=6.7e-32  Score=201.65  Aligned_cols=257  Identities=15%  Similarity=0.219  Sum_probs=200.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .|.+.|.-+.||++|    ++||+++.|.+..+|++...   +...++.+|..+|..+.|+| |.++|++++.|..+.+|
T Consensus       222 ~htdEVWfl~FS~nG----kyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSP-DdryLlaCg~~e~~~lw  296 (519)
T KOG0293|consen  222 DHTDEVWFLQFSHNG----KYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSP-DDRYLLACGFDEVLSLW  296 (519)
T ss_pred             hCCCcEEEEEEcCCC----eeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECC-CCCeEEecCchHheeec
Confidence            578999999999999    69999999999999987543   44678889999999999999 77999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc-------cccccCCCCccccccC
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA-------ESYTFNPARSTRPFDT  157 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  157 (291)
                      |+.+|.....+.  .++...+.+++|.|||..+++|+.|+.+..||+.... ....+       ..+...+++..+....
T Consensus       297 Dv~tgd~~~~y~--~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~v~  373 (519)
T KOG0293|consen  297 DVDTGDLRHLYP--SGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLLVT  373 (519)
T ss_pred             cCCcchhhhhcc--cCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEEEe
Confidence            999999888874  3466889999999999999999999999999997543 22211       1334444544433322


Q ss_pred             ccccCccc-------ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        158 QKEHFPQF-------STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       158 ~~~~~~~~-------~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                      .......+       .....-..+|++...+  ++++++.-.+..+++||+...            +.+..+.+|...-.
T Consensus       374 ~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~------------~lv~kY~Ghkq~~f  441 (519)
T KOG0293|consen  374 VDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN------------KLVRKYFGHKQGHF  441 (519)
T ss_pred             cccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh------------hHHHHhhcccccce
Confidence            21111111       0122345678888888  778888999999999999865            33788889988888


Q ss_pred             EEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        229 FIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       229 ~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+.-|+.. +..++|+|+.|++|++|+..++++    ...+  .+|...|++++|+|....++
T Consensus       442 iIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkl----l~~L--sGHs~~vNcVswNP~~p~m~  498 (519)
T KOG0293|consen  442 IIRSCFGGGNDKFIASGSEDSKVYIWHRISGKL----LAVL--SGHSKTVNCVSWNPADPEMF  498 (519)
T ss_pred             EEEeccCCCCcceEEecCCCceEEEEEccCCce----eEee--cCCcceeeEEecCCCCHHHh
Confidence            88777753 348999999999999999999953    3444  48999999999999766543

>KOG0643|consensus

Probab=100.00  E-value=1.5e-31  Score=189.13  Aligned_cols=212  Identities=14%  Similarity=0.180  Sum_probs=177.9

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .-..|+.+++-+.|+.++    .+|++++.|.++.||-..+|+.+-++.+|++.|.++.... +.+++++|+.|.++++|
T Consensus         5 ~l~GHERplTqiKyN~eG----DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLW   79 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREG----DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLW   79 (327)
T ss_pred             ccccCccccceEEecCCC----cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC-CcceeeeccccceeEEE
Confidence            344689999999999999    5999999999999999989999999999999999999998 88999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-----CCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-----DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      |+++|+++..+    ....+|..+.|+++|++++....     .+.|.++|++.......-.                  
T Consensus        80 Dv~tGk~la~~----k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~------------------  137 (327)
T KOG0643|consen   80 DVETGKQLATW----KTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSE------------------  137 (327)
T ss_pred             EcCCCcEEEEe----ecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhccc------------------
Confidence            99999999988    57889999999999998877654     5679999998654211110                  


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                         .++.....+...++..-|.  ++.|++|..||.|..||.+++...           +.....|...|+.++++  ||
T Consensus       138 ---ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~-----------v~s~~~h~~~Ind~q~s--~d  201 (327)
T KOG0643|consen  138 ---EPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKEL-----------VDSDEEHSSKINDLQFS--RD  201 (327)
T ss_pred             ---CceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCcee-----------eechhhhcccccccccc--CC
Confidence               1122223366788999998  889999999999999999998643           66667777777776665  66


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      ..++++++.|.+-++||..+.+
T Consensus       202 ~T~FiT~s~Dttakl~D~~tl~  223 (327)
T KOG0643|consen  202 RTYFITGSKDTTAKLVDVRTLE  223 (327)
T ss_pred             cceEEecccCccceeeecccee
Confidence            9999999999999999998754

>KOG0299|consensus

Probab=100.00  E-value=1.4e-31  Score=202.25  Aligned_cols=242  Identities=21%  Similarity=0.281  Sum_probs=191.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.+.+++.|+|+    ++||+|+.|..|.||+.++.+.++.+.+|.+.|.+++|-. ..+.|++++.|+.|++|+++
T Consensus       200 ~h~keil~~avS~Dg----kylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~  274 (479)
T KOG0299|consen  200 GHVKEILTLAVSSDG----KYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSID  274 (479)
T ss_pred             cccceeEEEEEcCCC----cEEEecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehh
Confidence            678899999999999    6999999999999999999999999999999999999998 78899999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ....+.++   .+|.+.|..+.-..-++.+-+|+.|+++++|++.....+-                             
T Consensus       275 ~~s~vetl---yGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqli-----------------------------  322 (479)
T KOG0299|consen  275 QLSYVETL---YGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLI-----------------------------  322 (479)
T ss_pred             HhHHHHHH---hCCccceeeechhcccceEEeccccceeEEEeccccceee-----------------------------
Confidence            88888777   7999999999988888777778899999999995443221                             


Q ss_pred             ccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        168 RDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       168 ~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      +.+|...+.|++|- ...+++|+.+|.|.+|++...++.............  ...-..+-|..+++.-|...++|+|+.
T Consensus       323 frg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~--~~~~~~~~Witsla~i~~sdL~asGS~  400 (479)
T KOG0299|consen  323 FRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPE--LDPVNGNFWITSLAVIPGSDLLASGSW  400 (479)
T ss_pred             eeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCC--ccccccccceeeeEecccCceEEecCC
Confidence            12477889999997 789999999999999999887664222211111000  011111125555566677999999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|.|++|-+..+-..-.++..+   ...+.|++++|+++|+.|++
T Consensus       401 ~G~vrLW~i~~g~r~i~~l~~l---s~~GfVNsl~f~~sgk~iva  442 (479)
T KOG0299|consen  401 SGCVRLWKIEDGLRAINLLYSL---SLVGFVNSLAFSNSGKRIVA  442 (479)
T ss_pred             CCceEEEEecCCccccceeeec---ccccEEEEEEEccCCCEEEE
Confidence            9999999999885322222222   34579999999999997753

>KOG1036|consensus

Probab=100.00  E-value=7.3e-31  Score=189.07  Aligned_cols=240  Identities=14%  Similarity=0.216  Sum_probs=183.9

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ++...++.|+++.|+|..+    .|+++++||.+++|+.....+...++ |+.++.+++|.+  ...+++|+.||.|+.+
T Consensus         8 l~npP~d~IS~v~f~~~~~----~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d--~~~~~~G~~dg~vr~~   80 (323)
T KOG1036|consen    8 LENPPEDGISSVKFSPSSS----DLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD--ESTIVTGGLDGQVRRY   80 (323)
T ss_pred             cCCCChhceeeEEEcCcCC----cEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC--CceEEEeccCceEEEE
Confidence            3445679999999998874    78888899999999999887666665 899999999996  4789999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |+.++.....    ..|..+|+|+.+++....+++|+.|++|++||.+.......+.                       
T Consensus        81 Dln~~~~~~i----gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-----------------------  133 (323)
T KOG1036|consen   81 DLNTGNEDQI----GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-----------------------  133 (323)
T ss_pred             EecCCcceee----ccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-----------------------
Confidence            9998877665    4899999999999988899999999999999999755443332                       


Q ss_pred             cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccC---CCce---------------------------
Q psy10348        165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTN---ETNV---------------------------  214 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~---------------------------  214 (291)
                            ....|.++...++.|+.|+.|..+.+||+++......+..   ....                           
T Consensus       134 ------~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d  207 (323)
T KOG1036|consen  134 ------QGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFD  207 (323)
T ss_pred             ------cCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccC
Confidence                  3447889998899999999999999999998765521100   0000                           


Q ss_pred             ------eeeeeecCCcc-------cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeE
Q psy10348        215 ------TIINRLNFKDC-------EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT  281 (291)
Q Consensus       215 ------~~~~~~~~~~~-------~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~  281 (291)
                            ..-..|+.|..       .-.+.+++++|-...||+|+.||.|.+||+.+.+.+.      ...+....|.+++
T Consensus       208 ~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~------q~~~~~~SI~sls  281 (323)
T KOG1036|consen  208 DSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLK------QLAKYETSISSLS  281 (323)
T ss_pred             CchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhh------hccCCCCceEEEE
Confidence                  01111222210       0112345555668899999999999999999986432      2223356799999


Q ss_pred             EccCCceee
Q psy10348        282 LSKNGNVLL  290 (291)
Q Consensus       282 ~s~~g~~l~  290 (291)
                      |+.||..||
T Consensus       282 fs~dG~~LA  290 (323)
T KOG1036|consen  282 FSMDGSLLA  290 (323)
T ss_pred             eccCCCeEE
Confidence            999999987

>KOG0313|consensus

Probab=100.00  E-value=1.3e-31  Score=197.96  Aligned_cols=262  Identities=19%  Similarity=0.237  Sum_probs=195.2

Q ss_pred             CCceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCC--CcEEEEeecC
Q psy10348          1 MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD--FNLLLSVSKD   78 (291)
Q Consensus         1 ~~~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~d   78 (291)
                      |.+...+.|++.|.++.-.  .    +.+++|+.||.+++||.. |+....+.+|.++|.+++|...+  ...|++++.|
T Consensus        96 P~pl~~~~hdDWVSsv~~~--~----~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~D  168 (423)
T KOG0313|consen   96 PKPLQCFLHDDWVSSVKGA--S----KWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMD  168 (423)
T ss_pred             CCccccccchhhhhhhccc--C----ceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCC
Confidence            3455678899999999888  2    489999999999999975 99999999999999998886423  2369999999


Q ss_pred             CeEEEEECCCcceee-eeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         79 HTLRLWNIKTDICIA-IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        79 g~i~vwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      .++++|.++.++... ......+|...|.++...++|..+++|+.|..|.+|+..+ .....++..-. .+... .....
T Consensus       169 qtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~-~~~~~~E~~s~-~rrk~-~~~~~  245 (423)
T KOG0313|consen  169 QTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVET-DEEDELESSSN-RRRKK-QKREK  245 (423)
T ss_pred             ceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCC-Cccccccccch-hhhhh-hhhhh
Confidence            999999988775432 2222259999999999999999999999999999999322 22222211100 00000 00011


Q ss_pred             ccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                      ......+..++.+|..+|.++.|. ...+++++.|.+|+.||+.++..            ..++.... ...  ++..+|
T Consensus       246 ~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~------------~~~~~~~k-sl~--~i~~~~  310 (423)
T KOG0313|consen  246 EGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGL------------KSTLTTNK-SLN--CISYSP  310 (423)
T ss_pred             cccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccc------------eeeeecCc-cee--Eeeccc
Confidence            112223455677899999999999 77999999999999999998865            33333332 233  444556


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..++||+|+.|..|++||.+++..   ........+|.+.|.++.|+|...+++
T Consensus       311 ~~~Ll~~gssdr~irl~DPR~~~g---s~v~~s~~gH~nwVssvkwsp~~~~~~  361 (423)
T KOG0313|consen  311 LSKLLASGSSDRHIRLWDPRTGDG---SVVSQSLIGHKNWVSSVKWSPTNEFQL  361 (423)
T ss_pred             ccceeeecCCCCceeecCCCCCCC---ceeEEeeecchhhhhheecCCCCceEE
Confidence            699999999999999999998852   234455568999999999999887764

>KOG0264|consensus

Probab=100.00  E-value=1.1e-31  Score=202.52  Aligned_cols=246  Identities=20%  Similarity=0.265  Sum_probs=198.3

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----------ceeEEEeeeccceeEEEEecCCCcEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----------ACVRHFYGHGHAINELKFHPQDFNLLLS   74 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s   74 (291)
                      ..+.|++.|+.+.+-|...   .++|+.+..+.|.|||..+-          .+-..+.+|++.-.+|+|++...-.|++
T Consensus       119 ~~i~h~gEVnRaRymPQnp---~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls  195 (422)
T KOG0264|consen  119 QKINHDGEVNRARYMPQNP---NIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLS  195 (422)
T ss_pred             EeccCCccchhhhhCCCCC---cEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEee
Confidence            3567899999999999876   78999999999999997642          1223788999988999999988889999


Q ss_pred             eecCCeEEEEECCCcce----eeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCC
Q psy10348         75 VSKDHTLRLWNIKTDIC----IAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                      ++.|++|++||+.....    +.....+.+|...|..++|++. ..+|++++.|+.+.|||+|+.+..            
T Consensus       196 ~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~------------  263 (422)
T KOG0264|consen  196 GSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSK------------  263 (422)
T ss_pred             ccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCC------------
Confidence            99999999999975432    2222223799999999999996 458889999999999999963110            


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                    .-....+|.+.|.|++|+   +..||+|+.|++|++||+|+....           +.++.+|...
T Consensus       264 --------------~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~-----------lh~~e~H~de  318 (422)
T KOG0264|consen  264 --------------PSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKP-----------LHTFEGHEDE  318 (422)
T ss_pred             --------------CcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccC-----------ceeccCCCcc
Confidence                          112224699999999998   669999999999999999998753           8999999999


Q ss_pred             EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc--------ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS--------IKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--------~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |..+.|+|+. ...||+++.|+.+.|||+..-...+        .....+.+.||...|..+.|+|+..++++
T Consensus       319 v~~V~WSPh~-etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~  390 (422)
T KOG0264|consen  319 VFQVEWSPHN-ETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIA  390 (422)
T ss_pred             eEEEEeCCCC-CceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEE
Confidence            9999888764 6889999999999999997532211        12345667799999999999999887753

>KOG0294|consensus

Probab=100.00  E-value=7.2e-31  Score=189.67  Aligned_cols=250  Identities=18%  Similarity=0.235  Sum_probs=194.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCc--EEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN--LLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~s~~~dg~i~vwd   85 (291)
                      .|..+|++++.+  +    +++|+|+.|-+|+|||+.+...+..+-.|.+.|+++.|.+ ...  .|++|+.||.|.+|+
T Consensus        41 aH~~sitavAVs--~----~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~  113 (362)
T KOG0294|consen   41 AHAGSITALAVS--G----PYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWR  113 (362)
T ss_pred             ccccceeEEEec--c----eeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecC-CcchhheeeecCCCcEEEEE
Confidence            578999999987  4    5999999999999999999999999999999999999988 543  899999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhh-----ccccccCCCCccccccC-cc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDAC-----AESYTFNPARSTRPFDT-QK  159 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~  159 (291)
                      ...-.++..+   ++|.+.|+.++.+|.+++-++.+.|+.+++||+..++.-..+     ...+.|.|.+....+.. ..
T Consensus       114 ~~~W~~~~sl---K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~  190 (362)
T KOG0294|consen  114 VGSWELLKSL---KAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNK  190 (362)
T ss_pred             cCCeEEeeee---cccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccE
Confidence            9988888888   899999999999999999999999999999999888754332     23456666655222111 10


Q ss_pred             c------cCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        160 E------HFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       160 ~------~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                      .      ....+... .....+.++.|. +..+++|..|+.|.+||....            .+...+.+|...|..+.+
T Consensus       191 i~i~q~d~A~v~~~i-~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~------------~~~~~~~AH~~RVK~i~~  257 (362)
T KOG0294|consen  191 IDIYQLDNASVFREI-ENPKRILCATFLDGSELLVGGDNEWISLKDTDSD------------TPLTEFLAHENRVKDIAS  257 (362)
T ss_pred             EEEEecccHhHhhhh-hccccceeeeecCCceEEEecCCceEEEeccCCC------------ccceeeecchhheeeeEE
Confidence            0      00011111 122457788887 889999999999999999875            448899999999999988


Q ss_pred             EecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE
Q psy10348        233 SMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL  282 (291)
Q Consensus       233 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~  282 (291)
                      -.+|++.+|++++.||.|+|||++.....+.  ..+.......+++|+..
T Consensus       258 ~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~--~~l~e~n~~~RltCl~~  305 (362)
T KOG0294|consen  258 YTNPEHEYLVTASSDGFIKVWDIDMETKKRP--TLLAELNTNVRLTCLRV  305 (362)
T ss_pred             EecCCceEEEEeccCceEEEEEccccccCCc--ceeEEeecCCccceeee
Confidence            8888999999999999999999987643221  12222223456666654

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=3.6e-30  Score=209.90  Aligned_cols=212  Identities=18%  Similarity=0.289  Sum_probs=160.8

Q ss_pred             ecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc--------eeeeeccccCCCC
Q psy10348         32 AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI--------CIAIFGGVEGHRD  103 (291)
Q Consensus        32 ~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--------~~~~~~~~~~~~~  103 (291)
                      |+.++.|++|+......+..+.+|.++|.+++|+|.++.+|++|+.||+|++||+.++.        .+..+   .+|..
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L---~gH~~  126 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL---KGHKK  126 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEe---ecCCC
Confidence            56688999999887788888999999999999999557899999999999999997643        22234   68999


Q ss_pred             ceEEEEEccCCCE-EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-
Q psy10348        104 EVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-  181 (291)
Q Consensus       104 ~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-  181 (291)
                      .|.+++|+|++.. |++++.|++|++||+++++....+.                             |...|.+++|+ 
T Consensus       127 ~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-----------------------------~~~~V~Slswsp  177 (568)
T PTZ00420        127 KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-----------------------------MPKKLSSLKWNI  177 (568)
T ss_pred             cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-----------------------------cCCcEEEEEECC
Confidence            9999999999875 5788999999999999887543322                             45679999998 


Q ss_pred             -CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE---EecCCCcEEEEEcCCC----cEEEE
Q psy10348        182 -GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF---SMDYWQKILAVGNQSG----RTYVW  253 (291)
Q Consensus       182 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~~~dg----~i~vw  253 (291)
                       |.+|++++.|+.|++||++++..            +.++.+|.+.+....+   .+++++.+|++++.|+    .|+||
T Consensus       178 dG~lLat~s~D~~IrIwD~Rsg~~------------i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLW  245 (568)
T PTZ00420        178 KGNLLSGTCVGKHMHIIDPRKQEI------------ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLW  245 (568)
T ss_pred             CCCEEEEEecCCEEEEEECCCCcE------------EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEE
Confidence             88999999999999999998744            6777778765443332   2346788999887664    79999


Q ss_pred             EcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        254 DLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      |+++...   .........+.+.+...-..++|.+++
T Consensus       246 Dlr~~~~---pl~~~~ld~~~~~L~p~~D~~tg~l~l  279 (568)
T PTZ00420        246 DLKNTTS---ALVTMSIDNASAPLIPHYDESTGLIYL  279 (568)
T ss_pred             ECCCCCC---ceEEEEecCCccceEEeeeCCCCCEEE
Confidence            9996432   223333333334444444455576665

>KOG0640|consensus

Probab=100.00  E-value=2.5e-31  Score=191.99  Aligned_cols=214  Identities=20%  Similarity=0.278  Sum_probs=175.6

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC------------c------ceeEEEeeeccceeEEEEe
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF------------H------ACVRHFYGHGHAINELKFH   65 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~------------~------~~~~~~~~~~~~v~~~~~~   65 (291)
                      .+...|..++++.+|+|||.    ++|+|+.|..|+|.|++.            +      -.++++..|.++|+++.|+
T Consensus       106 ~ylt~HK~~cR~aafs~DG~----lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH  181 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGS----LVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH  181 (430)
T ss_pred             EEEeecccceeeeeeCCCCc----EEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec
Confidence            35567999999999999995    999999999999999861            1      2467788999999999999


Q ss_pred             cCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccc
Q psy10348         66 PQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        66 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~  145 (291)
                      | ....|++|+.|++|+++|+......+.++. .....+|.++.|+|.|.+|+.|.....+++||+.+.++-..      
T Consensus       182 P-re~ILiS~srD~tvKlFDfsK~saKrA~K~-~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvs------  253 (430)
T KOG0640|consen  182 P-RETILISGSRDNTVKLFDFSKTSAKRAFKV-FQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVS------  253 (430)
T ss_pred             c-hhheEEeccCCCeEEEEecccHHHHHHHHH-hhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeee------
Confidence            9 889999999999999999986554444322 24567899999999999999999999999999998775321      


Q ss_pred             cCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                      .+                   ..+.|.+.|+++.++  +++.++++.||.|++||--+.++            +.++...
T Consensus       254 an-------------------Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rC------------v~t~~~A  302 (430)
T KOG0640|consen  254 AN-------------------PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRC------------VRTIGNA  302 (430)
T ss_pred             cC-------------------cccccccceeEEEecCCccEEEEeccCCcEEeeccccHHH------------HHHHHhh
Confidence            11                   224599999999998  88999999999999999877755            6666544


Q ss_pred             cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      .+...+....+..+++|+++.+.|..+++|++.++.+
T Consensus       303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~  339 (430)
T KOG0640|consen  303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRM  339 (430)
T ss_pred             cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCce
Confidence            4444455556667799999999999999999998754

>KOG0319|consensus

Probab=99.98  E-value=1.7e-31  Score=212.55  Aligned_cols=203  Identities=17%  Similarity=0.277  Sum_probs=180.4

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-----e----EEEeeeccceeEEEEecCCCcEEEEeec
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-----V----RHFYGHGHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-----~----~~~~~~~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      ..|+..|.+++++..+.   .+|++++.|+++++|++...+.     .    .+...|...|++++.+| +..++|||+.
T Consensus       408 ~gH~~svgava~~~~~a---sffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~Sq  483 (775)
T KOG0319|consen  408 NGHTNSVGAVAGSKLGA---SFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQ  483 (775)
T ss_pred             cccccccceeeecccCc---cEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEeccc
Confidence            45889999999987776   7999999999999999875211     1    12347999999999999 8899999999


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      |.+.+||+++..+....+   .+|+..|.|+.|+|..+.++|++.|++|+||.+.+..+++++.                
T Consensus       484 DktaKiW~le~~~l~~vL---sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e----------------  544 (775)
T KOG0319|consen  484 DKTAKIWDLEQLRLLGVL---SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE----------------  544 (775)
T ss_pred             ccceeeecccCceEEEEe---eCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeec----------------
Confidence            999999999988888888   8999999999999999999999999999999999999887774                


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                                  +|...|..+.|-  +..|++++.||.|++|++.+.++            +.++..|...+|.+...  
T Consensus       545 ------------GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC------------~~tlD~H~DrvWaL~~~--  598 (775)
T KOG0319|consen  545 ------------GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNEC------------EMTLDAHNDRVWALSVS--  598 (775)
T ss_pred             ------------CccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhh------------hhhhhhccceeEEEeec--
Confidence                        599999999997  88999999999999999999966            89999999999987766  


Q ss_pred             CCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        236 YWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      |.+.++++|+.||.|.+|.=.+.
T Consensus       599 ~~~~~~~tgg~Dg~i~~wkD~Te  621 (775)
T KOG0319|consen  599 PLLDMFVTGGGDGRIIFWKDVTE  621 (775)
T ss_pred             CccceeEecCCCeEEEEeecCcH
Confidence            55889999999999999976553

>KOG0288|consensus

Probab=99.98  E-value=1.6e-31  Score=199.37  Aligned_cols=228  Identities=17%  Similarity=0.237  Sum_probs=186.5

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      .+.|+++.|.+++    +.+++++.|+.+++|++...+...++.+|++.|+++.|.. ....+++|+.|.+|++||+...
T Consensus       219 ~g~it~~d~d~~~----~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~  293 (459)
T KOG0288|consen  219 LGNITSIDFDSDN----KHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKA  293 (459)
T ss_pred             CCCcceeeecCCC----ceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhh
Confidence            3668999999888    5999999999999999999999999999999999999998 6566999999999999999998


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      .+.+.+    -....+..++.+  ...+++|-.|+.|++||.++.......+                            
T Consensus       294 ~C~kt~----l~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~----------------------------  339 (459)
T KOG0288|consen  294 YCSKTV----LPGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVP----------------------------  339 (459)
T ss_pred             heeccc----cccccccceEec--ceeeeecccccceEEEeccCCceeeEee----------------------------
Confidence            888775    445566666665  5678899999999999999988766554                            


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS  247 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d  247 (291)
                       -.+.|+++..+  +..+++++.|.++.+.|+++.+.          ....+-.+........+..++|++.|+|+|+.|
T Consensus       340 -~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI----------~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~d  408 (459)
T KOG0288|consen  340 -LGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEI----------RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSAD  408 (459)
T ss_pred             -cCcceeeEeeccCCeEEeeecCCCceeeeecccccE----------EEEeeccccccccccceeEECCCCceeeeccCC
Confidence             23478888877  77888899999999999998754          222222333344445667788889999999999


Q ss_pred             CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |.|+||++.+++    +...+........|++++|+|.|.+|++
T Consensus       409 gsv~iW~v~tgK----lE~~l~~s~s~~aI~s~~W~~sG~~Lls  448 (459)
T KOG0288|consen  409 GSVYIWSVFTGK----LEKVLSLSTSNAAITSLSWNPSGSGLLS  448 (459)
T ss_pred             CcEEEEEccCce----EEEEeccCCCCcceEEEEEcCCCchhhc
Confidence            999999999985    3456665555558999999999998875

>KOG0277|consensus

Probab=99.98  E-value=3.4e-31  Score=186.04  Aligned_cols=203  Identities=22%  Similarity=0.376  Sum_probs=175.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      +|..+|.++.|++...   ..+++++.|++|++|+...++.++++.+|...|...+|+|..++++++++.|+.+++||++
T Consensus       102 EH~~EV~Svdwn~~~r---~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr  178 (311)
T KOG0277|consen  102 EHKREVYSVDWNTVRR---RIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVR  178 (311)
T ss_pred             hhhhheEEeccccccc---eeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEec
Confidence            6889999999999765   6889999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .......+   ..|..+|.|+.|+.- ...++||+.|+.|+.||++..+.                           ++.
T Consensus       179 ~~gk~~~i---~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~---------------------------pl~  228 (311)
T KOG0277|consen  179 SPGKFMSI---EAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT---------------------------PLF  228 (311)
T ss_pred             CCCceeEE---EeccceeEeecccccCCcEEEecCCCceEEEEehhhccc---------------------------cce
Confidence            65444445   689999999999985 45789999999999999998662                           133


Q ss_pred             cccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        167 TRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .+.+|.-.|+.+.|+   ..+|++++.|=++++||.......           +.+...|..-+..++|+.. ++.++|+
T Consensus       229 eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~-----------~e~~~~HtEFv~g~Dws~~-~~~~vAs  296 (311)
T KOG0277|consen  229 ELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSA-----------IETVDHHTEFVCGLDWSLF-DPGQVAS  296 (311)
T ss_pred             eecCCceEEEEEecCcchhhHhhhccccceEEecccccchhh-----------hhhhhccceEEeccccccc-cCceeee
Confidence            346799999999998   569999999999999999866543           6666777777777888875 6899999


Q ss_pred             EcCCCcEEEEEc
Q psy10348        244 GNQSGRTYVWDL  255 (291)
Q Consensus       244 ~~~dg~i~vwd~  255 (291)
                      .+.|+.++||+.
T Consensus       297 ~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  297 TGWDELLYVWNP  308 (311)
T ss_pred             cccccceeeecc
Confidence            999999999984

>KOG0316|consensus

Probab=99.97  E-value=1.5e-30  Score=180.94  Aligned_cols=189  Identities=23%  Similarity=0.335  Sum_probs=165.7

Q ss_pred             eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        48 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      .+..+..++++|.++.|+- +|++.++++.|.+|++|+...|.+++++   .+|..+|..++.+.|+..|++++.|..+.
T Consensus         9 r~~~l~~~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktY---sghG~EVlD~~~s~Dnskf~s~GgDk~v~   84 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTY---SGHGHEVLDAALSSDNSKFASCGGDKAVQ   84 (307)
T ss_pred             hceeecccccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeee---cCCCceeeeccccccccccccCCCCceEE
Confidence            3556788999999999999 9999999999999999999999999998   89999999999999999999999999999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      +||+.+++..+.+.                            +|.+.|+.++|+  ...+++|+.|..+++||.++... 
T Consensus        85 vwDV~TGkv~Rr~r----------------------------gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~-  135 (307)
T KOG0316|consen   85 VWDVNTGKVDRRFR----------------------------GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF-  135 (307)
T ss_pred             EEEcccCeeeeecc----------------------------cccceeeEEEecCcceEEEeccccceeEEEEcccCCC-
Confidence            99999999887775                            599999999999  56999999999999999998765 


Q ss_pred             ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        206 ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                               ++++.+......|..+.++    +..+++|+.||++|.||++.+..      ....  ...+|+++.|++|
T Consensus       136 ---------ePiQildea~D~V~Si~v~----~heIvaGS~DGtvRtydiR~G~l------~sDy--~g~pit~vs~s~d  194 (307)
T KOG0316|consen  136 ---------EPIQILDEAKDGVSSIDVA----EHEIVAGSVDGTVRTYDIRKGTL------SSDY--FGHPITSVSFSKD  194 (307)
T ss_pred             ---------CccchhhhhcCceeEEEec----ccEEEeeccCCcEEEEEeeccee------ehhh--cCCcceeEEecCC
Confidence                     5577777777777776665    78999999999999999999842      1122  2359999999999


Q ss_pred             Cceee
Q psy10348        286 GNVLL  290 (291)
Q Consensus       286 g~~l~  290 (291)
                      |+.++
T Consensus       195 ~nc~L  199 (307)
T KOG0316|consen  195 GNCSL  199 (307)
T ss_pred             CCEEE
Confidence            98765

>KOG0274|consensus

Probab=99.97  E-value=3.8e-30  Score=209.07  Aligned_cols=216  Identities=19%  Similarity=0.307  Sum_probs=187.4

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|.++++..-+    .++++|+.|.++++||..+|++...+.+|.+.|.++...+   ..+++|+.|.+|++|++
T Consensus       246 ~GH~g~V~~l~~~~~~----~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v  318 (537)
T KOG0274|consen  246 VGHFGGVWGLAFPSGG----DKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDV  318 (537)
T ss_pred             cCCCCCceeEEEecCC----CEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEec
Confidence            3688999999998744    5999999999999999999999999999999999998776   68899999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .++..+..+   .+|.++|+++..+  +.++++|+.|++|++||+.+++++..+.                         
T Consensus       319 ~n~~~l~l~---~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~-------------------------  368 (537)
T KOG0274|consen  319 TNGACLNLL---RGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLS-------------------------  368 (537)
T ss_pred             cCcceEEEe---ccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeec-------------------------
Confidence            999999998   5799999999997  8899999999999999999998877664                         


Q ss_pred             cccccCcceeEEEEcC-CEEEEecCCCeEEEecCCCC-CccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWLG-DFVLSKSCENCIICWKPGRL-EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~-~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                         +|..+|.++.+.+ +.+++|+.|++|++||+++. ++            +..+.+|..-+..+.    ..+++|.++
T Consensus       369 ---gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c------------~~tl~~h~~~v~~l~----~~~~~Lvs~  429 (537)
T KOG0274|consen  369 ---GHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKC------------IHTLQGHTSLVSSLL----LRDNFLVSS  429 (537)
T ss_pred             ---CCcceEEEEEecCcceEEeeeeccceEeecCCchhhh------------hhhhcCCcccccccc----cccceeEec
Confidence               5999999999998 99999999999999999998 44            778888887664332    238999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      +.||+|++||..+++++    ..+... |.+.|..+++.
T Consensus       430 ~aD~~Ik~WD~~~~~~~----~~~~~~-~~~~v~~l~~~  463 (537)
T KOG0274|consen  430 SADGTIKLWDAEEGECL----RTLEGR-HVGGVSALALG  463 (537)
T ss_pred             cccccEEEeecccCcee----eeeccC-CcccEEEeecC
Confidence            99999999999999754    344332 55677777775

>KOG0296|consensus

Probab=99.97  E-value=1.1e-29  Score=186.82  Aligned_cols=228  Identities=17%  Similarity=0.269  Sum_probs=183.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|+|+.||.++.    +||||+-+|.|+||+..++.....+...-..+.-|.|+| .+..|+.|+.||.+.+|.+
T Consensus       103 tgHKDSVt~~~Fshdgt----lLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~i  177 (399)
T KOG0296|consen  103 TGHKDSVTCCSFSHDGT----LLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQI  177 (399)
T ss_pred             cCCCCceEEEEEccCce----EEEecCCCccEEEEEcccCceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEEC
Confidence            36899999999999994    999999999999999999998888865567788899999 9999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-------ccccCCC----------
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-------SYTFNPA----------  149 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~~~~~----------  149 (291)
                      .++...+.+   .+|+.++++-.|.|+|++++++..||+|++|++.+++++..+..       .+.++..          
T Consensus       178 p~~~~~kv~---~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e  254 (399)
T KOG0296|consen  178 PSQALCKVM---SGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSE  254 (399)
T ss_pred             CCcceeeEe---cCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCC
Confidence            987777777   79999999999999999999999999999999999987766551       1111100          


Q ss_pred             ----------------------------------------Cccccc---cCcccc-------CcccccccccCcceeEEE
Q psy10348        150 ----------------------------------------RSTRPF---DTQKEH-------FPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       150 ----------------------------------------~~~~~~---~~~~~~-------~~~~~~~~~~~~~v~~~~  179 (291)
                                                              ....++   ..+.+.       ...++..-.|+..|..+.
T Consensus       255 ~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~  334 (399)
T KOG0296|consen  255 GVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLK  334 (399)
T ss_pred             ccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEE
Confidence                                                    000000   000000       011122234888999999


Q ss_pred             EcC-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        180 WLG-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       180 ~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      |.+ .+|++++.+|.|+.||.++++.            +..+.+|...|..+.  .+|+.+++++++.|++.+||+..
T Consensus       335 w~~t~~l~t~c~~g~v~~wDaRtG~l------------~~~y~GH~~~Il~f~--ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  335 WLNTDYLLTACANGKVRQWDARTGQL------------KFTYTGHQMGILDFA--LSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             EcCcchheeeccCceEEeeeccccce------------EEEEecCchheeEEE--EcCCCcEEEEecCCCeEEEEecC
Confidence            985 8999999999999999999965            899999998877555  45679999999999999999864

>KOG1332|consensus

Probab=99.97  E-value=9.7e-31  Score=182.73  Aligned_cols=246  Identities=17%  Similarity=0.205  Sum_probs=190.9

Q ss_pred             CceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEeeeccceeEEEE-ecCCCcEEEEeec
Q psy10348          2 STRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFYGHGHAINELKF-HPQDFNLLLSVSK   77 (291)
Q Consensus         2 ~~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~   77 (291)
                      .+++.-.|++.|..+...-.+    ++|||++.|++|+|+..+.+   +++..+.+|.+||..++| +|.-|.+||+++.
T Consensus         3 ~q~idt~H~D~IHda~lDyyg----krlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsY   78 (299)
T KOG1332|consen    3 MQTIDTQHEDMIHDAQLDYYG----KRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSY   78 (299)
T ss_pred             ceehhhhhhhhhhHhhhhhhc----ceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeec
Confidence            345666788888888887777    59999999999999998754   467889999999999999 6778999999999


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCcccc
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~  154 (291)
                      ||.|.||.-..++-.+. .....|...|++++|.|.  |-.|++++.||.|.|.+.+.. .-..                
T Consensus        79 DgkVIiWke~~g~w~k~-~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t----------------  141 (299)
T KOG1332|consen   79 DGKVIIWKEENGRWTKA-YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTT----------------  141 (299)
T ss_pred             CceEEEEecCCCchhhh-hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccc----------------
Confidence            99999999887754332 233689999999999986  568999999999999998765 1110                


Q ss_pred             ccCccccCcccccccccCcceeEEEEc-----C-----------CEEEEecCCCeEEEecCCCCCccccccCCCceeeee
Q psy10348        155 FDTQKEHFPQFSTRDIHRNYVDCVRWL-----G-----------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN  218 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~-----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  218 (291)
                                -...+.|.-.|++++|.     |           ..|++|+.|+.|+||+.....-          ..-.
T Consensus       142 ----------~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w----------~~e~  201 (299)
T KOG1332|consen  142 ----------SKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSW----------KLER  201 (299)
T ss_pred             ----------hhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcch----------hhhh
Confidence                      01113588888888886     2           4699999999999999987632          2234


Q ss_pred             eecCCcccEEEEEEEecCC--CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        219 RLNFKDCEIWFIRFSMDYW--QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.+|..-+.-++++|+-.  ..+||+++.||++.||....... +....+++  .....+.++.||+.|+.|+.
T Consensus       202 ~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e-~wk~tll~--~f~~~~w~vSWS~sGn~LaV  273 (299)
T KOG1332|consen  202 TLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYE-PWKKTLLE--EFPDVVWRVSWSLSGNILAV  273 (299)
T ss_pred             hhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccC-cccccccc--cCCcceEEEEEeccccEEEE
Confidence            5888999888888887531  35899999999999999873322 12223333  23468999999999999873

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=3.8e-29  Score=202.86  Aligned_cols=228  Identities=16%  Similarity=0.230  Sum_probs=165.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----------cee---EEEeeeccceeEEEEecCCCcEEEEeec
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----------ACV---RHFYGHGHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----------~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      ..|.....++++.    .+++++.+..+..|+...+          +..   ..+.+|.+.|.+++|+|.++.+|++|+.
T Consensus        21 ~~i~~~~~~~d~~----~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~   96 (493)
T PTZ00421         21 LNVTPSTALWDCS----NTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE   96 (493)
T ss_pred             eccccccccCCCC----CcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC
Confidence            3444555566643    5666666666666664332          211   2467899999999999966789999999


Q ss_pred             CCeEEEEECCCcc-------eeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCC
Q psy10348         78 DHTLRLWNIKTDI-------CIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        78 dg~i~vwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                      |++|++||+.++.       .+..+   .+|...|.+++|+|++ ++|++++.|+.|++||+++++....+         
T Consensus        97 DgtIkIWdi~~~~~~~~~~~~l~~L---~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l---------  164 (493)
T PTZ00421         97 DGTIMGWGIPEEGLTQNISDPIVHL---QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVI---------  164 (493)
T ss_pred             CCEEEEEecCCCccccccCcceEEe---cCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEE---------
Confidence            9999999997653       34444   7999999999999985 68999999999999999987654333         


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                                         .+|...|.+++|+  +++|++++.|++|++||+++++.            +..+..|....
T Consensus       165 -------------------~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~------------v~tl~~H~~~~  213 (493)
T PTZ00421        165 -------------------KCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTI------------VSSVEAHASAK  213 (493)
T ss_pred             -------------------cCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcE------------EEEEecCCCCc
Confidence                               3488899999998  78999999999999999998743            66666666543


Q ss_pred             EEEEEEecCCCcEEEEEc----CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        228 WFIRFSMDYWQKILAVGN----QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .. ...+.+++..+++++    .|+.|++||+++....   ...... .....+....|++++++|+
T Consensus       214 ~~-~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p---~~~~~~-d~~~~~~~~~~d~d~~~L~  275 (493)
T PTZ00421        214 SQ-RCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASP---YSTVDL-DQSSALFIPFFDEDTNLLY  275 (493)
T ss_pred             ce-EEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCc---eeEecc-CCCCceEEEEEcCCCCEEE
Confidence            21 233445566666543    5899999999876421   122221 2234566678999998875

>KOG0305|consensus

Probab=99.97  E-value=3.6e-30  Score=202.32  Aligned_cols=224  Identities=22%  Similarity=0.346  Sum_probs=185.5

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ++.|+++.|++++    .+||+|..+|.|.|||..+.+.+..+.+ |...|-+++|..   ..+.+|+.|+.|..+|++.
T Consensus       217 ~~~vtSv~ws~~G----~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~---~~lssGsr~~~I~~~dvR~  289 (484)
T KOG0305|consen  217 EELVTSVKWSPDG----SHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNS---SVLSSGSRDGKILNHDVRI  289 (484)
T ss_pred             CCceEEEEECCCC----CEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccC---ceEEEecCCCcEEEEEEec
Confidence            7999999999999    4999999999999999999999999988 999999999985   7899999999999999998


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      .+.....  +.+|...|..++|++++.+|++|+.|+.+.|||.........+.                           
T Consensus       290 ~~~~~~~--~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~---------------------------  340 (484)
T KOG0305|consen  290 SQHVVST--LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFT---------------------------  340 (484)
T ss_pred             chhhhhh--hhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEe---------------------------
Confidence            7765551  37999999999999999999999999999999996666554443                           


Q ss_pred             cccCcceeEEEEc---CCEEEEecC--CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        169 DIHRNYVDCVRWL---GDFVLSKSC--ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       169 ~~~~~~v~~~~~~---~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                       .|.+.|.+++|+   .++||+|+.  |++|++||..++..            +..... ...|..+.|+  +..+-|++
T Consensus       341 -~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~------------i~~vdt-gsQVcsL~Ws--k~~kEi~s  404 (484)
T KOG0305|consen  341 -EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR------------IDSVDT-GSQVCSLIWS--KKYKELLS  404 (484)
T ss_pred             -ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE------------eccccc-CCceeeEEEc--CCCCEEEE
Confidence             499999999998   678988764  99999999998754            444332 3345555555  44544444


Q ss_pred             --EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 --GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 --~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        |..++.|.||+..+.+      ......+|...|..+++||||..+++
T Consensus       405 thG~s~n~i~lw~~ps~~------~~~~l~gH~~RVl~la~SPdg~~i~t  448 (484)
T KOG0305|consen  405 THGYSENQITLWKYPSMK------LVAELLGHTSRVLYLALSPDGETIVT  448 (484)
T ss_pred             ecCCCCCcEEEEeccccc------eeeeecCCcceeEEEEECCCCCEEEE
Confidence              4578899999999864      33334489999999999999999874

>KOG0313|consensus

Probab=99.97  E-value=1.5e-29  Score=187.00  Aligned_cols=232  Identities=19%  Similarity=0.308  Sum_probs=187.6

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce----eEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC----VRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      ....|.++|.+++|-...+.. ..|++++.|.++++|..+.++.    ++.-++|+..|.++...+ ++..+++|+.|.+
T Consensus       139 ~~~Ght~~ik~v~~v~~n~~~-~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~  216 (423)
T KOG0313|consen  139 TIVGHTGPIKSVAWVIKNSSS-CLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTM  216 (423)
T ss_pred             EEecCCcceeeeEEEecCCcc-ceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecC-CCCeEEeecccce
Confidence            445788999999987655322 3799999999999999887643    333459999999999999 9999999999999


Q ss_pred             EEEEECCC-------------------------cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         81 LRLWNIKT-------------------------DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        81 i~vwd~~~-------------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      |++|+...                         +.++..   +.+|..+|.++.|++ ...+++++.|.+|+.||+.++.
T Consensus       217 lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vt---l~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~  292 (423)
T KOG0313|consen  217 LKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVT---LEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGG  292 (423)
T ss_pred             eeecccCCCccccccccchhhhhhhhhhhcccccCceEE---ecccccceeeEEEcC-CCceEeecccceEEEEEeeccc
Confidence            99999321                         112333   489999999999987 6689999999999999999999


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCc
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETN  213 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  213 (291)
                      ...++.                             ....+.++.+.  .++|++|+.|..+++||.+++...        
T Consensus       293 ~~~~~~-----------------------------~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs--------  335 (423)
T KOG0313|consen  293 LKSTLT-----------------------------TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGS--------  335 (423)
T ss_pred             ceeeee-----------------------------cCcceeEeecccccceeeecCCCCceeecCCCCCCCc--------
Confidence            776654                             45567888887  679999999999999999987553        


Q ss_pred             eeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        214 VTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       214 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                       -..+++.+|..-|..+.+++. +...|++|+.|+++++||+++.+.     .++...+|...|.++.|+.-+
T Consensus       336 -~v~~s~~gH~nwVssvkwsp~-~~~~~~S~S~D~t~klWDvRS~k~-----plydI~~h~DKvl~vdW~~~~  401 (423)
T KOG0313|consen  336 -VVSQSLIGHKNWVSSVKWSPT-NEFQLVSGSYDNTVKLWDVRSTKA-----PLYDIAGHNDKVLSVDWNEGG  401 (423)
T ss_pred             -eeEEeeecchhhhhheecCCC-CceEEEEEecCCeEEEEEeccCCC-----cceeeccCCceEEEEeccCCc
Confidence             446788999998888888764 367789999999999999998762     233444788999999998643

>KOG1446|consensus

Probab=99.97  E-value=2.3e-28  Score=176.96  Aligned_cols=258  Identities=16%  Similarity=0.197  Sum_probs=198.8

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec--CCeEEEEEC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK--DHTLRLWNI   86 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~   86 (291)
                      -...|+++.|+++++    ++++++.|.+++|||..+++.++++..++-.+..++|.. ....++.++.  |.+|+..++
T Consensus        13 ~~~~i~sl~fs~~G~----~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth-~~~~~i~sStk~d~tIryLsl   87 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGL----LLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTH-HSNTVIHSSTKEDDTIRYLSL   87 (311)
T ss_pred             CCCceeEEEecCCCC----EEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEec-CCceEEEccCCCCCceEEEEe
Confidence            468999999999995    999999999999999999999999998888899999987 4455555554  889999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc----ccccCCCCccccccCcc---
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE----SYTFNPARSTRPFDTQK---  159 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---  159 (291)
                      .+.+.++.|   .+|...|..++.+|-+..+++++.|++|++||++..++...+..    ...+.|.+.........   
T Consensus        88 ~dNkylRYF---~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~I  164 (311)
T KOG1446|consen   88 HDNKYLRYF---PGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELI  164 (311)
T ss_pred             ecCceEEEc---CCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeE
Confidence            999999999   89999999999999999999999999999999997776554432    34555554332222111   


Q ss_pred             ----------ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        160 ----------EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       160 ----------~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                                +.+..+.....-....+.+.|+  |++++.++..+.+.+.|.-.+..            +.++..+...-
T Consensus       165 kLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~------------~~tfs~~~~~~  232 (311)
T KOG1446|consen  165 KLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTV------------KSTFSGYPNAG  232 (311)
T ss_pred             EEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcE------------eeeEeeccCCC
Confidence                      1111222223446678899998  88999999999999999887753            55555443221


Q ss_pred             -EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        228 -WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       228 -~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                       .-+..++.||++++++|+.||+|.+|++++++.+    ..+.. .+.+++.++.|+|.-..+++
T Consensus       233 ~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v----~~~~~-~~~~~~~~~~fnP~~~mf~s  292 (311)
T KOG1446|consen  233 NLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKV----AVLRG-PNGGPVSCVRFNPRYAMFVS  292 (311)
T ss_pred             CcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEe----eEecC-CCCCCccccccCCceeeeee
Confidence             1256778899999999999999999999998632    33332 26789999999998666553

>KOG0282|consensus

Probab=99.97  E-value=1.8e-30  Score=197.39  Aligned_cols=227  Identities=16%  Similarity=0.244  Sum_probs=182.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|..+|.+++|+.++.    .+++++.|+.|++||+++|+++..+. -...++|+.|+|++.+.+++|+.|+.|+.||+
T Consensus       255 ~gH~k~Vrd~~~s~~g~----~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDi  329 (503)
T KOG0282|consen  255 KGHRKPVRDASFNNCGT----SFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDI  329 (503)
T ss_pred             hcchhhhhhhhccccCC----eeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEec
Confidence            46899999999999994    99999999999999999999999886 35678999999966699999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-------ccccCCCCccccccCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-------SYTFNPARSTRPFDTQK  159 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~  159 (291)
                      ++++.++.+   ..|-+.|..+.|-++|+++++++.|++++||+.+..-.+.....       .+...|.+....-..+.
T Consensus       330 Rs~kvvqeY---d~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~d  406 (503)
T KOG0282|consen  330 RSGKVVQEY---DRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMD  406 (503)
T ss_pred             cchHHHHHH---HhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccC
Confidence            999988887   78999999999999999999999999999999988776654432       33444444333322222


Q ss_pred             ccCc-----------ccccccccC--cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        160 EHFP-----------QFSTRDIHR--NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       160 ~~~~-----------~~~~~~~~~--~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                      ....           ....+.+|.  +.-..+.|+  |.+|++|+.||.+.+||.++.+.            +..+..|.
T Consensus       407 N~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl------------~~~lkah~  474 (503)
T KOG0282|consen  407 NYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKL------------VSKLKAHD  474 (503)
T ss_pred             ceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhh------------hhccccCC
Confidence            2211           112234553  456677887  78999999999999999998744            78888898


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      ..+..+.|.+.. ...+|+++.||.|++||
T Consensus       475 ~~ci~v~wHP~e-~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  475 QPCIGVDWHPVE-PSKVATCGWDGLIKIWD  503 (503)
T ss_pred             cceEEEEecCCC-cceeEecccCceeEecC
Confidence            887777666532 46889999999999996

>KOG0278|consensus

Probab=99.97  E-value=1.2e-30  Score=182.99  Aligned_cols=251  Identities=15%  Similarity=0.179  Sum_probs=202.2

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      |.....|..+|-.++|||- .++|.+|++++.||.-.+-+-++|.-+-+|.+|++.|.....+. +...-|+++.|-+-+
T Consensus         7 pl~c~ghtrpvvdl~~s~i-tp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~-na~~aasaaadftak   84 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPI-TPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAK   84 (334)
T ss_pred             ceEEcCCCcceeEEeccCC-CCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc-hhhhhhhhcccchhh
Confidence            4455678999999999985 35678999999999999999999999999999999999999998 888899999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +||.-+|..+..|    .|+.-|..++|+.|.++|++|+.+..+||||++..+-..                        
T Consensus        85 vw~a~tgdelhsf----~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App------------------------  136 (334)
T KOG0278|consen   85 VWDAVTGDELHSF----EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPP------------------------  136 (334)
T ss_pred             hhhhhhhhhhhhh----hhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCc------------------------
Confidence            9999999999988    799999999999999999999999999999998765321                        


Q ss_pred             cccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceee------------------------
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTI------------------------  216 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------------------------  216 (291)
                         ....+|...|..+.|.  .+.|++.+.|++||+||.+++..........+++.                        
T Consensus       137 ---~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdak  213 (334)
T KOG0278|consen  137 ---KEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAK  213 (334)
T ss_pred             ---hhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccc
Confidence               1224599999999998  66888889999999999999876522211111110                        


Q ss_pred             -eeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        217 -INRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       217 -~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                       +..++....+.++.+.+.+|+...+++|+.|..++.||..+++.+..     ...+|.++|.++.|+|||..-|+
T Consensus       214 sf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~-----~nkgh~gpVhcVrFSPdGE~yAs  284 (334)
T KOG0278|consen  214 SFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGS-----YNKGHFGPVHCVRFSPDGELYAS  284 (334)
T ss_pred             cccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeee-----cccCCCCceEEEEECCCCceeec
Confidence             01111112233345566678889999999999999999999975331     13589999999999999987653

>KOG0265|consensus

Probab=99.97  E-value=1.4e-29  Score=181.83  Aligned_cols=191  Identities=23%  Similarity=0.351  Sum_probs=156.3

Q ss_pred             eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcE
Q psy10348         48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL  126 (291)
Q Consensus        48 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  126 (291)
                      ++..+.+|++.|..+.|+| ++.+||+|+.|..|.+|++.. -+....+   ++|.+.|..+.|.+++..+++++.|.++
T Consensus        39 p~m~l~gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdceN~~~l---kgHsgAVM~l~~~~d~s~i~S~gtDk~v  114 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCENFWVL---KGHSGAVMELHGMRDGSHILSCGTDKTV  114 (338)
T ss_pred             hhhhcCCCcceEEEEEECC-CCCeEeecCCcceEEEEeccccccceeee---ccccceeEeeeeccCCCEEEEecCCceE
Confidence            3455679999999999999 999999999999999999653 2334444   7999999999999999999999999999


Q ss_pred             EEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCC
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      +.||.++++..+.++                            +|..-|+.+...   ..++.+++.|+++++||+++..
T Consensus       115 ~~wD~~tG~~~rk~k----------------------------~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~  166 (338)
T KOG0265|consen  115 RGWDAETGKRIRKHK----------------------------GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE  166 (338)
T ss_pred             EEEecccceeeehhc----------------------------cccceeeecCccccCCeEEEecCCCceEEEEeecccc
Confidence            999999999887765                            388888888765   4588899999999999999875


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      .            ++++.. ...++  ++.+...+..+.+|+-|+.|++||++.++.    ..++  .+|..+|+.+..+
T Consensus       167 ~------------~~t~~~-kyqlt--Av~f~d~s~qv~sggIdn~ikvWd~r~~d~----~~~l--sGh~DtIt~lsls  225 (338)
T KOG0265|consen  167 A------------IKTFEN-KYQLT--AVGFKDTSDQVISGGIDNDIKVWDLRKNDG----LYTL--SGHADTITGLSLS  225 (338)
T ss_pred             h------------hhcccc-ceeEE--EEEecccccceeeccccCceeeeccccCcc----eEEe--ecccCceeeEEec
Confidence            4            333321 22233  445555589999999999999999998753    2344  4899999999999


Q ss_pred             cCCceeeC
Q psy10348        284 KNGNVLLC  291 (291)
Q Consensus       284 ~~g~~l~s  291 (291)
                      |+|.++.+
T Consensus       226 ~~gs~lls  233 (338)
T KOG0265|consen  226 RYGSFLLS  233 (338)
T ss_pred             cCCCcccc
Confidence            99998864

>KOG0646|consensus

Probab=99.97  E-value=1.6e-29  Score=191.42  Aligned_cols=231  Identities=18%  Similarity=0.188  Sum_probs=187.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      -.++|.|++-+|++.    +|+.|+..|.|++|.+.+|+++..+.+|-.+|+++.|+- |+.+|+||+.||.|.+|++..
T Consensus        80 ~Pg~v~al~s~n~G~----~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~  154 (476)
T KOG0646|consen   80 LPGPVHALASSNLGY----FLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTD  154 (476)
T ss_pred             cccceeeeecCCCce----EEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeC-CCcEEEecCCCccEEEEEEEe
Confidence            467899999999994    888887999999999999999999999999999999998 999999999999999998642


Q ss_pred             ---------cceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         89 ---------DICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        89 ---------~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                               -.+...+   ..|.-+|+++...+-  ..++++++.|.++++||+..+.++.++.                
T Consensus       155 lv~a~~~~~~~p~~~f---~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~----------------  215 (476)
T KOG0646|consen  155 LVSADNDHSVKPLHIF---SDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT----------------  215 (476)
T ss_pred             ecccccCCCccceeee---ccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe----------------
Confidence                     2344444   799999999998765  3589999999999999999998776654                


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc----ccCCCceeeeeeecCCcc--cEEE
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL----RTNETNVTIINRLNFKDC--EIWF  229 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~i~~  229 (291)
                                   ....+.+++.+  +..++.|+.+|.|.+.++........    +........+..+.+|..  .|++
T Consensus       216 -------------fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITc  282 (476)
T KOG0646|consen  216 -------------FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITC  282 (476)
T ss_pred             -------------cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeE
Confidence                         56668888888  77999999999999988765542211    222334455777888887  8888


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                      ++++.|  |..|++|+.||+|+|||+.+.++++....      ..++|+.+.+.|
T Consensus       283 Lais~D--gtlLlSGd~dg~VcvWdi~S~Q~iRtl~~------~kgpVtnL~i~~  329 (476)
T KOG0646|consen  283 LAISTD--GTLLLSGDEDGKVCVWDIYSKQCIRTLQT------SKGPVTNLQINP  329 (476)
T ss_pred             EEEecC--ccEEEeeCCCCCEEEEecchHHHHHHHhh------hccccceeEeec
Confidence            888877  99999999999999999999876643321      235888888754

>KOG0289|consensus

Probab=99.97  E-value=3.1e-29  Score=188.45  Aligned_cols=229  Identities=14%  Similarity=0.215  Sum_probs=194.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ...+.++...|..    ..+++|+.|..+.++|..+++.+..+++|...|+.+.|+| +...+++++.|..|+||.....
T Consensus       219 ~pgi~ald~~~s~----~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~-~~~~v~~aSad~~i~vws~~~~  293 (506)
T KOG0289|consen  219 TPGITALDIIPSS----SKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHK-DLDTVITASADEIIRVWSVPLS  293 (506)
T ss_pred             CCCeeEEeecCCC----CcceecCCCCceEEEecchhhhhhhccCcceEEEEEEecc-chhheeecCCcceEEeeccccc
Confidence            4667778777774    4999999999999999999999999999999999999999 8899999999999999999877


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ......   ..|..+|+.+..+|+|.||++++.|++..+.|++++..+.....                          +
T Consensus       294 s~~~~~---~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~--------------------------~  344 (506)
T KOG0289|consen  294 SEPTSS---RPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSD--------------------------E  344 (506)
T ss_pred             cCcccc---ccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEee--------------------------c
Confidence            766666   78999999999999999999999999999999999986644321                          0


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS  247 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d  247 (291)
                      ...-.+++.+|+  |.+|.+|..|+.|++||+.+...            +..|.+|.++|..++|+  .||-||+++++|
T Consensus       345 ~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~------------~a~Fpght~~vk~i~Fs--ENGY~Lat~add  410 (506)
T KOG0289|consen  345 TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTN------------VAKFPGHTGPVKAISFS--ENGYWLATAADD  410 (506)
T ss_pred             cccceeEEeeEcCCceEEeccCCCceEEEEEcCCccc------------cccCCCCCCceeEEEec--cCceEEEEEecC
Confidence            122347889998  67899999999999999998854            88999999999988777  459999999999


Q ss_pred             CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.|++||++..+..+    .+... ...++.++.|.+.|++|+.
T Consensus       411 ~~V~lwDLRKl~n~k----t~~l~-~~~~v~s~~fD~SGt~L~~  449 (506)
T KOG0289|consen  411 GSVKLWDLRKLKNFK----TIQLD-EKKEVNSLSFDQSGTYLGI  449 (506)
T ss_pred             CeEEEEEehhhcccc----eeecc-ccccceeEEEcCCCCeEEe
Confidence            999999999886432    22221 1237999999999999863

>KOG0289|consensus

Probab=99.97  E-value=1.1e-28  Score=185.46  Aligned_cols=233  Identities=17%  Similarity=0.228  Sum_probs=190.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|+.+.|+|+.    ..+++++.|-.|+||.............|.++|+.+..+| .+.+|++++.||...+.|++
T Consensus       259 Gh~kki~~v~~~~~~----~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~  333 (506)
T KOG0289|consen  259 GHTKKITSVKFHKDL----DTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDIS  333 (506)
T ss_pred             CcceEEEEEEeccch----hheeecCCcceEEeeccccccCccccccccccceeeeecc-CCcEEEEecCCceEEEEEcc
Confidence            477899999999998    4999999999999999988877788889999999999999 99999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ++..+..... ....-.+++.+|+|||..|.+|..|+.+++||+..+.....|.                          
T Consensus       334 ~g~~lt~vs~-~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fp--------------------------  386 (506)
T KOG0289|consen  334 SGSQLTVVSD-ETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFP--------------------------  386 (506)
T ss_pred             CCcEEEEEee-ccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCC--------------------------
Confidence            9998877621 1233468999999999999999999999999999988666554                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                        +|.++|..++|+  |-+|++++.|+.|++||+|..+.            ..++...... ....+++++.|.+|+.++
T Consensus       387 --ght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n------------~kt~~l~~~~-~v~s~~fD~SGt~L~~~g  451 (506)
T KOG0289|consen  387 --GHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN------------FKTIQLDEKK-EVNSLSFDQSGTYLGIAG  451 (506)
T ss_pred             --CCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc------------cceeeccccc-cceeEEEcCCCCeEEeec
Confidence              499999999998  66999999999999999998764            4444443322 234456666699999998


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|=.|++++-.+.+-    ........|.+..+.+.|....++|++
T Consensus       452 ~~l~Vy~~~k~~k~W----~~~~~~~~~sg~st~v~Fg~~aq~l~s  493 (506)
T KOG0289|consen  452 SDLQVYICKKKTKSW----TEIKELADHSGLSTGVRFGEHAQYLAS  493 (506)
T ss_pred             ceeEEEEEecccccc----eeeehhhhcccccceeeecccceEEee
Confidence            886677766554421    123334467788999999999888874

>KOG0306|consensus

Probab=99.97  E-value=3.3e-29  Score=200.12  Aligned_cols=254  Identities=15%  Similarity=0.185  Sum_probs=212.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|...|+++++|.+.    ..+++| ..+.+++|+..+.++++++..  +.+.+..|-| .++++++|...|.+.+||+
T Consensus       370 ~GHR~dVRsl~vS~d~----~~~~Sg-a~~SikiWn~~t~kciRTi~~--~y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdl  441 (888)
T KOG0306|consen  370 GGHRSDVRSLCVSSDS----ILLASG-AGESIKIWNRDTLKCIRTITC--GYILASKFVP-GDRYIVLGTKNGELQVFDL  441 (888)
T ss_pred             ccchhheeEEEeecCc----eeeeec-CCCcEEEEEccCcceeEEecc--ccEEEEEecC-CCceEEEeccCCceEEEEe
Confidence            3588999999999987    255555 457999999999999999973  4889999999 8899999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh-----hh--------hhc-----cccccCC
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI-----KD--------ACA-----ESYTFNP  148 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~--------~~~-----~~~~~~~  148 (291)
                      .+...+..+   +.|.+.|.+++.+|++..+++|+.|.+|++||..-...     .+        ++.     .++.++|
T Consensus       442 aS~~l~Eti---~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp  518 (888)
T KOG0306|consen  442 ASASLVETI---RAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP  518 (888)
T ss_pred             ehhhhhhhh---hccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC
Confidence            998888887   79999999999999999999999999999999753221     11        111     1567888


Q ss_pred             CCccccccCccccCc--------ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeee
Q psy10348        149 ARSTRPFDTQKEHFP--------QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN  218 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  218 (291)
                      ++..+....++....        .+-.+-+|.-||.|+..+  +++++||+.|.+|++|=+.=+.+            .+
T Consensus       519 dgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDC------------HK  586 (888)
T KOG0306|consen  519 DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDC------------HK  586 (888)
T ss_pred             CCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchh------------hh
Confidence            888877766655443        334556899999999887  77999999999999999988866            78


Q ss_pred             eecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        219 RLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.+|...|..+.|.|  +..++.+++.|+.|+-||-...+.      .....+|...|++++.+|+|.++++
T Consensus       587 S~fAHdDSvm~V~F~P--~~~~FFt~gKD~kvKqWDg~kFe~------iq~L~~H~~ev~cLav~~~G~~vvs  651 (888)
T KOG0306|consen  587 SFFAHDDSVMSVQFLP--KTHLFFTCGKDGKVKQWDGEKFEE------IQKLDGHHSEVWCLAVSPNGSFVVS  651 (888)
T ss_pred             hhhcccCceeEEEEcc--cceeEEEecCcceEEeechhhhhh------heeeccchheeeeeEEcCCCCeEEe
Confidence            8899999998888885  589999999999999999887753      3344588999999999999999875

>KOG0772|consensus

Probab=99.97  E-value=9.9e-30  Score=195.11  Aligned_cols=242  Identities=16%  Similarity=0.199  Sum_probs=176.2

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      |...|.++++-|.|.    .|++|+.|..|++||....    +..+.++ .-...|.++.|++ .+..|++.+.....+|
T Consensus       166 gtk~Vsal~~Dp~Ga----R~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~-Tg~~iLvvsg~aqakl  240 (641)
T KOG0772|consen  166 GTKIVSALAVDPSGA----RFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSV-TGDQILVVSGSAQAKL  240 (641)
T ss_pred             CceEEEEeeecCCCc----eeeeccccceEEEEecccccccchhhhccCcccccccceeeecC-CCCeEEEEecCcceeE
Confidence            467889999999995    9999999999999998743    2233333 2345789999999 7888888888888999


Q ss_pred             EECCCc---------ceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccc
Q psy10348         84 WNIKTD---------ICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR  153 (291)
Q Consensus        84 wd~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  153 (291)
                      +|-...         +.+..+...++|...++|.+|+|..+ .|++++.||++|+||+...+.........         
T Consensus       241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k---------  311 (641)
T KOG0772|consen  241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTK---------  311 (641)
T ss_pred             EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeec---------
Confidence            995522         22333445689999999999999754 89999999999999998766332211100         


Q ss_pred             cccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc--cEEE
Q psy10348        154 PFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC--EIWF  229 (291)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~  229 (291)
                                   ...+..-+++.++|+  +.+|++|+.||.|.+|+.+.....         .....-..|..  .|++
T Consensus       312 -------------~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~---------p~~~vk~AH~~g~~Its  369 (641)
T KOG0772|consen  312 -------------PAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVR---------PVMKVKDAHLPGQDITS  369 (641)
T ss_pred             -------------cCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccc---------cceEeeeccCCCCceeE
Confidence                         011245568899998  889999999999999998665331         11233344554  6666


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.|+  ++|++|++-+.|+++++||++..+.   .+..........+-+.++|||+.++|++
T Consensus       370 i~FS--~dg~~LlSRg~D~tLKvWDLrq~kk---pL~~~tgL~t~~~~tdc~FSPd~kli~T  426 (641)
T KOG0772|consen  370 ISFS--YDGNYLLSRGFDDTLKVWDLRQFKK---PLNVRTGLPTPFPGTDCCFSPDDKLILT  426 (641)
T ss_pred             EEec--cccchhhhccCCCceeeeecccccc---chhhhcCCCccCCCCccccCCCceEEEe
Confidence            6555  5599999999999999999998763   2222222223346678999999999875

>KOG0973|consensus

Probab=99.97  E-value=4.8e-29  Score=206.47  Aligned_cols=245  Identities=20%  Similarity=0.306  Sum_probs=190.5

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEec--CCCeEEEEccCC------------cceeEEEeeeccceeEEEEecCCCcE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAG--SRAVIRIFSPAF------------HACVRHFYGHGHAINELKFHPQDFNL   71 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~--~dg~i~vw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~~   71 (291)
                      ...++..|.++..+|++    ..+|||+  .||.++||+.+.            .+.+.+...|.+.|+|+.|+| ||.+
T Consensus         9 v~H~~~~IfSIdv~pdg----~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~-dG~~   83 (942)
T KOG0973|consen    9 VNHNEKSIFSIDVHPDG----VKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP-DGSY   83 (942)
T ss_pred             cccCCeeEEEEEecCCc----eeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC-CCCe
Confidence            33456778999999999    4999999  899999998652            234566778999999999999 9999


Q ss_pred             EEEeecCCeEEEEECCC----------c--------ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         72 LLSVSKDHTLRLWNIKT----------D--------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~----------~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                      ||+|+.|+.|.||....          |        +.+..+   .+|...|..++|+|++.+|++++.|++|.+|+.++
T Consensus        84 lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l---~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~t  160 (942)
T KOG0973|consen   84 LASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSIL---RGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKT  160 (942)
T ss_pred             EeeccCcceEEEeeecccCCcccccccccccccceeeEEEEE---ecCCCccceeccCCCccEEEEecccceEEEEcccc
Confidence            99999999999999772          0        133344   89999999999999999999999999999999999


Q ss_pred             chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccc---
Q psy10348        134 PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELR---  208 (291)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~---  208 (291)
                      .+.+..+                            .+|...|..+.|+  |++|++-+.|++|++|++.........   
T Consensus       161 F~~~~vl----------------------------~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~p  212 (942)
T KOG0973|consen  161 FELLKVL----------------------------RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKP  212 (942)
T ss_pred             ceeeeee----------------------------ecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccc
Confidence            9766555                            4599999999999  999999999999999997653322000   


Q ss_pred             -----------------------------cC--------CCceeeeeeecCCcccEEEEEEEec----CCC---------
Q psy10348        209 -----------------------------TN--------ETNVTIINRLNFKDCEIWFIRFSMD----YWQ---------  238 (291)
Q Consensus       209 -----------------------------~~--------~~~~~~~~~~~~~~~~i~~~~~~~~----~~~---------  238 (291)
                                                   ..        ...-+.-..+-+|..++.+++|.|.    +..         
T Consensus       213 f~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~  292 (942)
T KOG0973|consen  213 FEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNC  292 (942)
T ss_pred             hhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCc
Confidence                                         00        0111223456688889999888763    111         


Q ss_pred             --cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        239 --KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       239 --~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        ..+|+|+.|++|.||......++--     .+.-....|..++|+|||..|++
T Consensus       293 ~y~i~AvgSqDrSlSVW~T~~~RPl~v-----i~~lf~~SI~DmsWspdG~~Lfa  342 (942)
T KOG0973|consen  293 YYCIAAVGSQDRSLSVWNTALPRPLFV-----IHNLFNKSIVDMSWSPDGFSLFA  342 (942)
T ss_pred             ceEEEEEecCCccEEEEecCCCCchhh-----hhhhhcCceeeeeEcCCCCeEEE
Confidence              1689999999999999977654321     11123468999999999988753

>KOG0973|consensus

Probab=99.97  E-value=9.2e-29  Score=204.84  Aligned_cols=232  Identities=19%  Similarity=0.240  Sum_probs=186.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC------------------cceeEEEeeeccceeEEEEecCC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF------------------HACVRHFYGHGHAINELKFHPQD   68 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~   68 (291)
                      ..|.+.|+|+.|+||+    .+||+|++|+.|.||+...                  .+.+..+.+|...|..++|+| +
T Consensus        66 ~~h~~sv~CVR~S~dG----~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~  140 (942)
T KOG0973|consen   66 DDHDGSVNCVRFSPDG----SYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-D  140 (942)
T ss_pred             ccccCceeEEEECCCC----CeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-C
Confidence            4688999999999999    5999999999999999762                  135677889999999999999 8


Q ss_pred             CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc------
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE------  142 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------  142 (291)
                      +.+|++++.|++|.+|+..+.+.+..+   .+|...|-.+.|.|-|++|++-+.|++|++|++.+....+.+.+      
T Consensus       141 ~~~lvS~s~DnsViiwn~~tF~~~~vl---~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~  217 (942)
T KOG0973|consen  141 DSLLVSVSLDNSVIIWNAKTFELLKVL---RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESP  217 (942)
T ss_pred             ccEEEEecccceEEEEccccceeeeee---ecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCC
Confidence            999999999999999999999888888   89999999999999999999999999999999877555444432      


Q ss_pred             ------ccccCCCCccccccC-c-----------cccCcccccccccCcceeEEEEc-------CC------------EE
Q psy10348        143 ------SYTFNPARSTRPFDT-Q-----------KEHFPQFSTRDIHRNYVDCVRWL-------GD------------FV  185 (291)
Q Consensus       143 ------~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~v~~~~~~-------~~------------~l  185 (291)
                            ...|+|++....... .           ++....-..+-+|..++.+++|+       .+            .+
T Consensus       218 ~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~  297 (942)
T KOG0973|consen  218 LTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIA  297 (942)
T ss_pred             CcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEE
Confidence                  466778766544321 1           12222334456899999999997       12            67


Q ss_pred             EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        186 LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      ++|+.|+.|.||.....++.           +...+.....  +++++|+|||..|++++.||+|.+..+...+
T Consensus       298 AvgSqDrSlSVW~T~~~RPl-----------~vi~~lf~~S--I~DmsWspdG~~LfacS~DGtV~~i~Fee~E  358 (942)
T KOG0973|consen  298 AVGSQDRSLSVWNTALPRPL-----------FVIHNLFNKS--IVDMSWSPDGFSLFACSLDGTVALIHFEEKE  358 (942)
T ss_pred             EEecCCccEEEEecCCCCch-----------hhhhhhhcCc--eeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence            89999999999998776553           1112222222  5667777889999999999999999998653

>KOG0308|consensus

Probab=99.97  E-value=4.4e-29  Score=196.35  Aligned_cols=223  Identities=18%  Similarity=0.268  Sum_probs=180.7

Q ss_pred             CCCEEEEecCCCeEEEEccCCcc------eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc--ceeeeec
Q psy10348         25 GRPLLAVAGSRAVIRIFSPAFHA------CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD--ICIAIFG   96 (291)
Q Consensus        25 ~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~   96 (291)
                      ++++|++||.||.|++|+...-.      .+..++.|.+.|+.+.... +++.|++++.|.+|++|+...+  -+...+ 
T Consensus        36 ~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~-~~~tlIS~SsDtTVK~W~~~~~~~~c~sti-  113 (735)
T KOG0308|consen   36 NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCG-NGKTLISASSDTTVKVWNAHKDNTFCMSTI-  113 (735)
T ss_pred             CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhc-CCCceEEecCCceEEEeecccCcchhHhhh-
Confidence            44789999999999999976421      4677889999999999988 8899999999999999999877  355555 


Q ss_pred             cccCCCCceEEEEE-ccCCCEEEEEecCCcEEEEeccCchh--hhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         97 GVEGHRDEVLSADF-DLLGTKIMSCGMDHSLKLWDLTKPEI--KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        97 ~~~~~~~~i~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                        ..|.+.|.|+++ -++..++++||.|+.|.+||+.++..  +..+..    -               +.-+...++..
T Consensus       114 --r~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~----~---------------t~~sl~sG~k~  172 (735)
T KOG0308|consen  114 --RTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNN----V---------------TVNSLGSGPKD  172 (735)
T ss_pred             --hcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccc----c---------------ccccCCCCCcc
Confidence              799999999999 77888999999999999999998843  222211    0               01111126888


Q ss_pred             ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEE
Q psy10348        174 YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTY  251 (291)
Q Consensus       174 ~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~  251 (291)
                      +|.+++.+  |..+++|+..+.|++||.++.+.            +..+.+|...|.++.+.  +||..+++++.||+|+
T Consensus       173 siYSLA~N~t~t~ivsGgtek~lr~wDprt~~k------------imkLrGHTdNVr~ll~~--dDGt~~ls~sSDgtIr  238 (735)
T KOG0308|consen  173 SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKK------------IMKLRGHTDNVRVLLVN--DDGTRLLSASSDGTIR  238 (735)
T ss_pred             ceeeeecCCcceEEEecCcccceEEeccccccc------------eeeeeccccceEEEEEc--CCCCeEeecCCCceEE
Confidence            99999998  55999999999999999999855            78888999999887766  5599999999999999


Q ss_pred             EEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        252 VWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       252 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +||+....++.    +  ...|...|+++..+|+=.++.
T Consensus       239 lWdLgqQrCl~----T--~~vH~e~VWaL~~~~sf~~vY  271 (735)
T KOG0308|consen  239 LWDLGQQRCLA----T--YIVHKEGVWALQSSPSFTHVY  271 (735)
T ss_pred             eeeccccceee----e--EEeccCceEEEeeCCCcceEE
Confidence            99999987543    2  335667799999988755543

>KOG0264|consensus

Probab=99.96  E-value=1.9e-28  Score=185.05  Aligned_cols=216  Identities=18%  Similarity=0.286  Sum_probs=172.7

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      ..|++.=++++|++...   ..|++++.|++|++||+...       .+...+.+|+..|..++|++.+..+|++++.|+
T Consensus       174 ~gH~~eg~glsWn~~~~---g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~  250 (422)
T KOG0264|consen  174 KGHEKEGYGLSWNRQQE---GTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDG  250 (422)
T ss_pred             Eeecccccccccccccc---eeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCC
Confidence            35666678899999876   69999999999999998643       234567899999999999998899999999999


Q ss_pred             eEEEEECCC--cceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         80 TLRLWNIKT--DICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        80 ~i~vwd~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      .+.|||+++  .++....   .+|.++|.|++|+|-+ ..||+|+.|++|.+||+|+...                    
T Consensus       251 ~L~iwD~R~~~~~~~~~~---~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--------------------  307 (422)
T KOG0264|consen  251 KLMIWDTRSNTSKPSHSV---KAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK--------------------  307 (422)
T ss_pred             eEEEEEcCCCCCCCcccc---cccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc--------------------
Confidence            999999995  3344444   7999999999999964 5788999999999999998763                    


Q ss_pred             CccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccc--cccCCCceeeeeeecCCcccEEEEE
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKE--LRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                             .+.++.+|...|.+|.|+   ...|++++.|+++.+||+.......  ......+...+....+|...|.  .
T Consensus       308 -------~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~--D  378 (422)
T KOG0264|consen  308 -------PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVS--D  378 (422)
T ss_pred             -------CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccc--c
Confidence                   233445699999999999   4589999999999999997665442  2233344455677777877655  5


Q ss_pred             EEecCCCcE-EEEEcCCCcEEEEEcCC
Q psy10348        232 FSMDYWQKI-LAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       232 ~~~~~~~~~-l~~~~~dg~i~vwd~~~  257 (291)
                      |+++|+..+ +++.+.|+.+.||.+..
T Consensus       379 fsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  379 FSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             ccCCCCCCeEEEEecCCceEEEeeccc
Confidence            666666655 67788999999999874

>KOG0300|consensus

Probab=99.96  E-value=1.3e-28  Score=178.73  Aligned_cols=230  Identities=20%  Similarity=0.310  Sum_probs=188.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC-
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI-   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-   86 (291)
                      .|.+.|..++-....    +.+.+++.|.+.+||.+++++++.++.+|.+.|++++|++ .+.++++++.|++..||.. 
T Consensus       146 GHkDGiW~Vaa~~tq----pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~-s~~L~lTaSGD~taHIW~~a  220 (481)
T KOG0300|consen  146 GHKDGIWHVAADSTQ----PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHN-SGLLLLTASGDETAHIWKAA  220 (481)
T ss_pred             ccccceeeehhhcCC----cceeecccccceeEEeeccccceeeecccccceeeEEecc-ccceEEEccCCcchHHHHHh
Confidence            477888888776665    5999999999999999999999999999999999999999 8999999999999999972 


Q ss_pred             -----CC------------------------------c-ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         87 -----KT------------------------------D-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        87 -----~~------------------------------~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                           ..                              + .....+..+.+|.+.|.+..|-..|+.+++++.|.+..+||
T Consensus       221 v~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwD  300 (481)
T KOG0300|consen  221 VNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWD  300 (481)
T ss_pred             hcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeee
Confidence                 11                              0 00111223478999999999999999999999999999999


Q ss_pred             ccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccc
Q psy10348        131 LTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELR  208 (291)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (291)
                      +++++.+..+.                            +|....+.++-+  ..++++.+.|.+.++||++...     
T Consensus       301 VEtge~v~~Lt----------------------------GHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI-----  347 (481)
T KOG0300|consen  301 VETGEVVNILT----------------------------GHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAI-----  347 (481)
T ss_pred             eccCceecccc----------------------------CcchhccccccCCcceEEEEeccCceeEeccchhhc-----
Confidence            99999776553                            577777777666  5588999999999999998543     


Q ss_pred             cCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        209 TNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                            ..+..|++|...++...|..   +..+++|++|.+|++||+++...   .+.++.   -.++++.++.+.-++.
T Consensus       348 ------~sV~VFQGHtdtVTS~vF~~---dd~vVSgSDDrTvKvWdLrNMRs---plATIR---tdS~~NRvavs~g~~i  412 (481)
T KOG0300|consen  348 ------QSVAVFQGHTDTVTSVVFNT---DDRVVSGSDDRTVKVWDLRNMRS---PLATIR---TDSPANRVAVSKGHPI  412 (481)
T ss_pred             ------ceeeeecccccceeEEEEec---CCceeecCCCceEEEeeeccccC---cceeee---cCCccceeEeecCCce
Confidence                  33888999999999888876   57899999999999999998752   223333   3468888888877766


Q ss_pred             ee
Q psy10348        289 LL  290 (291)
Q Consensus       289 l~  290 (291)
                      |+
T Consensus       413 IA  414 (481)
T KOG0300|consen  413 IA  414 (481)
T ss_pred             EE
Confidence            64

>KOG0275|consensus

Probab=99.96  E-value=9.2e-30  Score=185.32  Aligned_cols=228  Identities=21%  Similarity=0.319  Sum_probs=177.6

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      --+.++++|.|+.||.|.+    .+|+|+.||.|++|.+++|.+++.|. +|+..|+++.|+. |+..+++++.|.++++
T Consensus       258 ~fMMmd~aVlci~FSRDsE----MlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRi  332 (508)
T KOG0275|consen  258 NFMMMDDAVLCISFSRDSE----MLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRI  332 (508)
T ss_pred             ceeecccceEEEeecccHH----HhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEE
Confidence            3457889999999999985    99999999999999999999999997 9999999999999 8899999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc--
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH--  161 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  161 (291)
                      .-+++|++++.+   .+|...|+...|.++|..+++++.||+|++|+..+.+++.+++..-.--+-.+..++.....+  
T Consensus       333 HGlKSGK~LKEf---rGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~i  409 (508)
T KOG0275|consen  333 HGLKSGKCLKEF---RGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFI  409 (508)
T ss_pred             eccccchhHHHh---cCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEE
Confidence            999999999999   899999999999999999999999999999999999999888742111111111111110000  


Q ss_pred             ------C--------c---ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348        162 ------F--------P---QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF  222 (291)
Q Consensus       162 ------~--------~---~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  222 (291)
                            .        .   .++.-+...+..-+...+  |.++++.+.|+.++.|...++..            -.++..
T Consensus       410 VCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~L------------E~tl~V  477 (508)
T KOG0275|consen  410 VCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKL------------ERTLPV  477 (508)
T ss_pred             EEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCce------------eeeeec
Confidence                  0        0   111111112222233333  88999999999999999988854            566666


Q ss_pred             CcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        223 KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       223 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      |...+..  +..+|..+.||+=+.||.+++|.
T Consensus       478 hEkdvIG--l~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  478 HEKDVIG--LTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ccccccc--cccCcccchhhhhcccchhhhcC
Confidence            6665544  44556699999999999999994

>KOG0278|consensus

Probab=99.96  E-value=7.9e-29  Score=173.94  Aligned_cols=203  Identities=18%  Similarity=0.250  Sum_probs=171.4

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .+++|..-|.+|+|+.|.+    +|++|+.+..+||||++..+ +...+.+|.+.|..+.|.. ..+.|+++..|++|++
T Consensus        95 hsf~hkhivk~~af~~ds~----~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRL  169 (334)
T KOG0278|consen   95 HSFEHKHIVKAVAFSQDSN----YLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH-EDKCILSSADDKTVRL  169 (334)
T ss_pred             hhhhhhheeeeEEecccch----hhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec-cCceEEeeccCCceEE
Confidence            4678999999999999985    99999999999999998654 5677889999999999998 6688888899999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ||.+++..++.+    ..+.+|+++..+++|++|.++. .+.|.+||..+...++.++                      
T Consensus       170 WD~rTgt~v~sL----~~~s~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k----------------------  222 (334)
T KOG0278|consen  170 WDHRTGTEVQSL----EFNSPVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYK----------------------  222 (334)
T ss_pred             EEeccCcEEEEE----ecCCCCcceeeccCCCEEEEec-CceeEEeccccccceeecc----------------------
Confidence            999999999998    6788999999999998776665 5789999999988776554                      


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~  240 (291)
                             -...|.+...+  ...+++|+.|..++.||..+++.            +..+ .+|.++|-+++|+  |+|..
T Consensus       223 -------~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeE------------i~~~nkgh~gpVhcVrFS--PdGE~  281 (334)
T KOG0278|consen  223 -------MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEE------------IGSYNKGHFGPVHCVRFS--PDGEL  281 (334)
T ss_pred             -------CccccccccccCCCceEEecCcceEEEEEeccCCce------------eeecccCCCCceEEEEEC--CCCce
Confidence                   22234444444  45889999999999999999976            4444 7888998888777  55999


Q ss_pred             EEEEcCCCcEEEEEcCCCCC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~  260 (291)
                      .|+|+.||+|++|....++.
T Consensus       282 yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  282 YASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             eeccCCCceEEEEEecCCCc
Confidence            99999999999999987753

>KOG0310|consensus

Probab=99.96  E-value=1.8e-27  Score=181.31  Aligned_cols=201  Identities=17%  Similarity=0.240  Sum_probs=168.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|+.++..+.|+|..+   ..+++|+.|+.+++||+.+......+.+|++.|.+.+|+|.++.+++||+.||.|++||++
T Consensus       108 ah~apv~~~~f~~~d~---t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR  184 (487)
T KOG0310|consen  108 AHQAPVHVTKFSPQDN---TMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR  184 (487)
T ss_pred             hccCceeEEEecccCC---eEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence            5789999999999887   7999999999999999999887668899999999999999888899999999999999998


Q ss_pred             Cc-ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 TD-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .. ..+..+    .|..+|..+.+-|.|.++++++. ..+++||+-+|...-...                         
T Consensus       185 ~~~~~v~el----nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~-------------------------  234 (487)
T KOG0310|consen  185 SLTSRVVEL----NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSM-------------------------  234 (487)
T ss_pred             cCCceeEEe----cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhh-------------------------
Confidence            77 566666    89999999999999999999984 679999999655332211                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        ..|...|+|+++.  +..|++++-|+.+++||+.+.            +.++.+.... +  .+.++.+|+++.++.|
T Consensus       235 --~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~------------Kvv~s~~~~~-p--vLsiavs~dd~t~viG  297 (487)
T KOG0310|consen  235 --FNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY------------KVVHSWKYPG-P--VLSIAVSPDDQTVVIG  297 (487)
T ss_pred             --hcccceEEEEEeecCCceEeecccccceEEEEccce------------EEEEeeeccc-c--eeeEEecCCCceEEEe
Confidence              2388899999998  579999999999999997776            4466666554 3  4455556779999999


Q ss_pred             cCCCcEEEEEcCCC
Q psy10348        245 NQSGRTYVWDLDVQ  258 (291)
Q Consensus       245 ~~dg~i~vwd~~~~  258 (291)
                      ..||.+.+-+....
T Consensus       298 msnGlv~~rr~~~k  311 (487)
T KOG0310|consen  298 MSNGLVSIRRREVK  311 (487)
T ss_pred             cccceeeeehhhcc
Confidence            99998887755443

>KOG0274|consensus

Probab=99.96  E-value=6.8e-28  Score=196.00  Aligned_cols=212  Identities=20%  Similarity=0.294  Sum_probs=182.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-EeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      +...+.+..|. ++     ++++++.+++|++|+..++..+.. +.+|.+.|.++++.. .+.++++|+.|.++++||..
T Consensus       207 ~~~~~~~~q~~-~~-----~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~  279 (537)
T KOG0274|consen  207 DDHVVLCLQLH-DG-----FFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCS  279 (537)
T ss_pred             Ccchhhhheee-cC-----eEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecC
Confidence            56777888888 43     899999999999999999998888 999999999999997 78999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +|.+...+   .+|...|.++...  ...+++|+.|.+|++|++.++..+..+.                          
T Consensus       280 sg~C~~~l---~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~--------------------------  328 (537)
T KOG0274|consen  280 TGECTHSL---QGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLR--------------------------  328 (537)
T ss_pred             CCcEEEEe---cCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEec--------------------------
Confidence            99999999   7999999998874  4578888999999999999888765543                          


Q ss_pred             ccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC-cEEEEEcC
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ-KILAVGNQ  246 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~l~~~~~  246 (291)
                        +|..+|.++..+++++++|+.|++|++||..+.            ++++.+.+|...|..+.+  +  + ..+++|+.
T Consensus       329 --~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~------------~cl~sl~gH~~~V~sl~~--~--~~~~~~Sgs~  390 (537)
T KOG0274|consen  329 --GHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTG------------KCLKSLSGHTGRVYSLIV--D--SENRLLSGSL  390 (537)
T ss_pred             --cccccEEEEEecCCEEEEEecCceEEEEEhhhc------------eeeeeecCCcceEEEEEe--c--CcceEEeeee
Confidence              499999999999999999999999999999987            449999999999988744  3  4 89999999


Q ss_pred             CCcEEEEEcCCC-CCCcceeEEEeccccccceeeeEE
Q psy10348        247 SGRTYVWDLDVQ-DPSSIKFQILSHPRCMSAVRQTTL  282 (291)
Q Consensus       247 dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~  282 (291)
                      |++|++||+.+. +++    .+  ..+|.+-+..+.+
T Consensus       391 D~~IkvWdl~~~~~c~----~t--l~~h~~~v~~l~~  421 (537)
T KOG0274|consen  391 DTTIKVWDLRTKRKCI----HT--LQGHTSLVSSLLL  421 (537)
T ss_pred             ccceEeecCCchhhhh----hh--hcCCccccccccc
Confidence            999999999998 432    22  2355556655444

>KOG0641|consensus

Probab=99.96  E-value=2.1e-26  Score=159.85  Aligned_cols=234  Identities=20%  Similarity=0.197  Sum_probs=174.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC------c-----ce----eEEEeeeccceeEEEEecCCCcE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF------H-----AC----VRHFYGHGHAINELKFHPQDFNL   71 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~------~-----~~----~~~~~~~~~~v~~~~~~~~~~~~   71 (291)
                      +.....|.+++|+|.+    .+.|+|+...+.+|-....      +     ++    .+.-+.|.+.|.|.+|+| +|.+
T Consensus        29 l~dsqairav~fhp~g----~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~-~gel  103 (350)
T KOG0641|consen   29 LEDSQAIRAVAFHPAG----GLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP-CGEL  103 (350)
T ss_pred             ecchhheeeEEecCCC----ceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC-ccCe
Confidence            4556889999999999    5999999999999875321      1     11    122346889999999999 9999


Q ss_pred             EEEeecCCeEEEEECCCcceeee--eccccCCCCceEEEEEccC----CCEEEEEec-CCcEEEEeccCchhhhhhcccc
Q psy10348         72 LLSVSKDHTLRLWNIKTDICIAI--FGGVEGHRDEVLSADFDLL----GTKIMSCGM-DHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~i~~~~~~~~----~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                      |++|+.|.+|++...+...+-..  --.+.-|.+.|+.++|..+    +..|++++. |..|++-|...++....+    
T Consensus       104 iatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~----  179 (350)
T KOG0641|consen  104 IATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHAL----  179 (350)
T ss_pred             EEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceee----
Confidence            99999999999987654332211  0012579999999999653    446777654 778888888888754433    


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEE-EEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec--
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCV-RWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN--  221 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--  221 (291)
                                              .+|.+-|.++ .|++-++++|+.|.+|++||++-..+            +..+.  
T Consensus       180 ------------------------sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~------------v~~l~~~  223 (350)
T KOG0641|consen  180 ------------------------SGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSC------------VNTLDND  223 (350)
T ss_pred             ------------------------cCCcccEEEEEEecCcEEEccCCCceEEEEeeeccce------------eeeccCc
Confidence                                    4588888877 67899999999999999999987754            33322  


Q ss_pred             CCccc---EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        222 FKDCE---IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       222 ~~~~~---i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+...   ....+++.+|.|++|++|-.|....+||++.+..      +.....|+..|+++.|||...||++
T Consensus       224 ~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~------iq~f~phsadir~vrfsp~a~yllt  290 (350)
T KOG0641|consen  224 FHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRM------IQRFHPHSADIRCVRFSPGAHYLLT  290 (350)
T ss_pred             ccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCce------eeeeCCCccceeEEEeCCCceEEEE
Confidence            12211   2234456677799999999999999999999853      2334478899999999999888764

>KOG0269|consensus

Probab=99.96  E-value=2.6e-28  Score=195.54  Aligned_cols=222  Identities=18%  Similarity=0.336  Sum_probs=174.8

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +..+.|+.-..   ++|||++..|.|.+||+..   .+++..|..|+..+.++.|++..+.+|++|+.||.|++||++..
T Consensus        90 ~~DVkW~~~~~---NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~  166 (839)
T KOG0269|consen   90 AADVKWGQLYS---NLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK  166 (839)
T ss_pred             hhhcccccchh---hhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc
Confidence            34566774333   6999999999999999987   66778899999999999999989999999999999999999988


Q ss_pred             ceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      +....+   .+....|+.++|+|. +..|+++...|.+++||++....-.                           ..+
T Consensus       167 ~S~~t~---~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~---------------------------~k~  216 (839)
T KOG0269|consen  167 KSKSTF---RSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCE---------------------------KKL  216 (839)
T ss_pred             cccccc---cccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHH---------------------------HHh
Confidence            888887   678889999999995 6689999999999999999865321                           122


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-  245 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-  245 (291)
                      .+|.++|.|+.|+  +.+|++|+.|+.|+|||....+.          ..+.+++ ...++..++|-|.. ...||+++ 
T Consensus       217 ~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~----------~~~~tIn-Tiapv~rVkWRP~~-~~hLAtcsm  284 (839)
T KOG0269|consen  217 TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA----------KPKHTIN-TIAPVGRVKWRPAR-SYHLATCSM  284 (839)
T ss_pred             hcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc----------cceeEEe-ecceeeeeeeccCc-cchhhhhhc
Confidence            4699999999999  66999999999999999987654          2233322 23456667777653 35567766 


Q ss_pred             -CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        246 -QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       246 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                       .|-.|+|||++..-.   ...++.  .|...++.++|..
T Consensus       285 v~dtsV~VWDvrRPYI---P~~t~~--eH~~~vt~i~W~~  319 (839)
T KOG0269|consen  285 VVDTSVHVWDVRRPYI---PYATFL--EHTDSVTGIAWDS  319 (839)
T ss_pred             cccceEEEEeeccccc---cceeee--ccCccccceeccC
Confidence             678999999987542   123333  5677888888865

>KOG0293|consensus

Probab=99.96  E-value=4.2e-28  Score=181.50  Aligned_cols=231  Identities=13%  Similarity=0.184  Sum_probs=174.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ..|..+|.-+.||||.    ++|++++.|..+.+||+.+|.....+. +|...+.+++|.| |+..+++|+.|+.+..||
T Consensus       266 vgh~~~V~yi~wSPDd----ryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wd  340 (519)
T KOG0293|consen  266 VGHSQPVSYIMWSPDD----RYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWD  340 (519)
T ss_pred             ecccCceEEEEECCCC----CeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEec
Confidence            4578999999999999    599999999999999999999887775 4568899999999 999999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----ccccCCCCccccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----SYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  160 (291)
                      +. |+.....+  ......|.+++.++||+++++.+.|..|++++.++......+..     .+..+.++.....+....
T Consensus       341 lD-gn~~~~W~--gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~q  417 (519)
T KOG0293|consen  341 LD-GNILGNWE--GVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQ  417 (519)
T ss_pred             CC-cchhhccc--ccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccC
Confidence            87 55555552  12235699999999999999999999999999887665533332     222233322221111111


Q ss_pred             --------cCcccccccccCcc--eeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        161 --------HFPQFSTRDIHRNY--VDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       161 --------~~~~~~~~~~~~~~--v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                              ....+....+|...  +-.-+|.   ..++++|++|+.|+||+..+++            ++..+.+|...+
T Consensus       418 ei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk------------ll~~LsGHs~~v  485 (519)
T KOG0293|consen  418 EIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK------------LLAVLSGHSKTV  485 (519)
T ss_pred             eeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCc------------eeEeecCCccee
Confidence                    11122333455543  3344554   3599999999999999999884            489999999999


Q ss_pred             EEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      +++++.|. +..++|+|++||+||+|.....
T Consensus       486 NcVswNP~-~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  486 NCVSWNPA-DPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             eEEecCCC-CHHHhhccCCCCeEEEecCCcc
Confidence            98888763 4678999999999999987654

>KOG0305|consensus

Probab=99.96  E-value=5.2e-27  Score=184.68  Aligned_cols=216  Identities=19%  Similarity=0.225  Sum_probs=181.1

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      +.|+..+     .||+|.. ..|++|+..+++......-+...|+++.|++ +|.+|++|..+|.|.|||..+.+.+..+
T Consensus       183 ldWss~n-----~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~~~~  255 (484)
T KOG0305|consen  183 LDWSSAN-----VLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKTRTL  255 (484)
T ss_pred             hhcccCC-----eEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECC-CCCEEEEeecCCeEEEEehhhccccccc
Confidence            4677443     7887765 4899999999986665555589999999999 9999999999999999999988888887


Q ss_pred             ccccC-CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcc
Q psy10348         96 GGVEG-HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNY  174 (291)
Q Consensus        96 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (291)
                         .+ |...|-+++|.  +..+.+|+.|+.|..+|++..+....                           ...+|...
T Consensus       256 ---~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~---------------------------~~~~H~qe  303 (484)
T KOG0305|consen  256 ---RGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS---------------------------TLQGHRQE  303 (484)
T ss_pred             ---cCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh---------------------------hhhcccce
Confidence               56 99999999998  67899999999999999998875533                           12469999


Q ss_pred             eeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc--CCCcE
Q psy10348        175 VDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN--QSGRT  250 (291)
Q Consensus       175 v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~--~dg~i  250 (291)
                      |+.+.|+  +.++++|+.|+.+.|||....+.            ...+..|...|.+++|+|.. ..+||+|+  .|+.|
T Consensus       304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p------------~~~~~~H~aAVKA~awcP~q-~~lLAsGGGs~D~~i  370 (484)
T KOG0305|consen  304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEP------------KFTFTEHTAAVKALAWCPWQ-SGLLATGGGSADRCI  370 (484)
T ss_pred             eeeeEECCCCCeeccCCCccceEeccCCCccc------------cEEEeccceeeeEeeeCCCc-cCceEEcCCCcccEE
Confidence            9999998  88999999999999999966533            78899999999999999864 67888876  79999


Q ss_pred             EEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        251 YVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       251 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++||..+++.+.       .....+.|.+|.|++..+-|+
T Consensus       371 ~fwn~~~g~~i~-------~vdtgsQVcsL~Wsk~~kEi~  403 (484)
T KOG0305|consen  371 KFWNTNTGARID-------SVDTGSQVCSLIWSKKYKELL  403 (484)
T ss_pred             EEEEcCCCcEec-------ccccCCceeeEEEcCCCCEEE
Confidence            999999985432       223347999999999987665

>KOG0267|consensus

Probab=99.96  E-value=2.5e-29  Score=199.92  Aligned_cols=227  Identities=21%  Similarity=0.339  Sum_probs=193.5

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      |...+.|+..-...    +.+++|+.|-.+-+|.+..-..+..+.+|+.+|.++.|++ ...+|++|+.+|+|++||+++
T Consensus        27 hsaav~~lk~~~s~----r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~-~E~LlaagsasgtiK~wDlee  101 (825)
T KOG0267|consen   27 HSAAVGCLKIRKSS----RSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDT-SERLLAAGSASGTIKVWDLEE  101 (825)
T ss_pred             hhhhhceeeeeccc----eeeccCCCceeeccccccCCchhheeeccCCcceeeecCc-chhhhcccccCCceeeeehhh
Confidence            45556666654444    5899999999999999987777788999999999999999 889999999999999999999


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++.++.+   .+|...+..+.|+|-+.++++|+.|+.+.+||.+...+...+                            
T Consensus       102 Ak~vrtL---tgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~----------------------------  150 (825)
T KOG0267|consen  102 AKIVRTL---TGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTY----------------------------  150 (825)
T ss_pred             hhhhhhh---hccccCcceeeeccceEEeccccccccceehhhhccCceeee----------------------------
Confidence            9988877   899999999999999999999999999999999976665544                            


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      ++|...+..+.|.  |.+++.++.|.++++||+..++.            +..|..|.+.+..+.+  +|..-+++.|+.
T Consensus       151 ~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~------------~~ef~~~e~~v~sle~--hp~e~Lla~Gs~  216 (825)
T KOG0267|consen  151 KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKL------------SKEFKSHEGKVQSLEF--HPLEVLLAPGSS  216 (825)
T ss_pred             cCCcceeEEEeecCCCceeeccCCcceeeeeccccccc------------cccccccccccccccc--CchhhhhccCCC
Confidence            3488889999998  77999999999999999988844            8899999998888875  455889999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+++++||+++.+      .+-........|.+++|+|+|+.+++
T Consensus       217 d~tv~f~dletfe------~I~s~~~~~~~v~~~~fn~~~~~~~~  255 (825)
T KOG0267|consen  217 DRTVRFWDLETFE------VISSGKPETDGVRSLAFNPDGKIVLS  255 (825)
T ss_pred             CceeeeeccceeE------EeeccCCccCCceeeeecCCceeeec
Confidence            9999999999763      22222234578999999999987753

>KOG0300|consensus

Probab=99.96  E-value=1.3e-27  Score=173.61  Aligned_cols=228  Identities=16%  Similarity=0.224  Sum_probs=187.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEcc------CC------------------------------c----c
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSP------AF------------------------------H----A   47 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~------~~------------------------------~----~   47 (291)
                      .|.+.|+++.|++.+    .++++++.|++..||..      ..                              +    .
T Consensus       188 GH~GSVNsikfh~s~----~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRv  263 (481)
T KOG0300|consen  188 GHTGSVNSIKFHNSG----LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRV  263 (481)
T ss_pred             ccccceeeEEecccc----ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeee
Confidence            578999999999998    59999999999999972      10                              0    1


Q ss_pred             eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        48 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      ++..+.+|...|.+..|.. .++.+++++.|.+..+||+++|+.+..+   .+|....+.++-+|..+++++++.|-+.+
T Consensus       264 Pl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~L---tGHd~ELtHcstHptQrLVvTsSrDtTFR  339 (481)
T KOG0300|consen  264 PLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNIL---TGHDSELTHCSTHPTQRLVVTSSRDTTFR  339 (481)
T ss_pred             eeeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccc---cCcchhccccccCCcceEEEEeccCceeE
Confidence            3456788999999999998 9999999999999999999999999988   89999999999999999999999999999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccc
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKE  206 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~  206 (291)
                      +||++..-                           +....+.+|...|+++.|. ++.+++|+.|.+|++||+++.+.. 
T Consensus       340 LWDFReaI---------------------------~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsp-  391 (481)
T KOG0300|consen  340 LWDFREAI---------------------------QSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSP-  391 (481)
T ss_pred             eccchhhc---------------------------ceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCc-
Confidence            99998321                           2344557899999999999 889999999999999999988653 


Q ss_pred             cccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        207 LRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                                +.++.. ..+++-++++..  +..+|.--++..|++||++.....+ + ....-.+|...|+|++|..+.
T Consensus       392 ----------lATIRt-dS~~NRvavs~g--~~iIAiPhDNRqvRlfDlnG~RlaR-l-PrtsRqgHrRMV~c~AW~eeh  456 (481)
T KOG0300|consen  392 ----------LATIRT-DSPANRVAVSKG--HPIIAIPHDNRQVRLFDLNGNRLAR-L-PRTSRQGHRRMVTCCAWLEEH  456 (481)
T ss_pred             ----------ceeeec-CCccceeEeecC--CceEEeccCCceEEEEecCCCcccc-C-CcccccccceeeeeeeccccC
Confidence                      555443 234555555544  7899999999999999998764322 1 112334788899999998764

>KOG0302|consensus

Probab=99.96  E-value=1.8e-27  Score=176.05  Aligned_cols=215  Identities=18%  Similarity=0.269  Sum_probs=174.7

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----------------cceeEEEeeeccceeEEEEecCCC
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----------------HACVRHFYGHGHAINELKFHPQDF   69 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----------------~~~~~~~~~~~~~v~~~~~~~~~~   69 (291)
                      .+.|.+.++.+.-++-++  ..+.|+-+..|.|.||++..                .+++.++.+|...=.+|+|+|...
T Consensus       147 ~i~h~g~~NRvr~~~~~~--~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~  224 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGN--EVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT  224 (440)
T ss_pred             ccccccccceeeecccCC--cceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence            456777777777776642  24777778899999999742                256778889999999999999655


Q ss_pred             cEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      ..|++|..-+.|++|...+|.....-..+.+|+..|..++|+|.. ..|++|+.||+|+|||++.+.....+.       
T Consensus       225 g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-------  297 (440)
T KOG0302|consen  225 GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-------  297 (440)
T ss_pred             cccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-------
Confidence            678999888999999999887654433447899999999999975 488999999999999999985332221       


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                         .++|.+.|+.|.|+  -.+|++|+.||+++|||++..+..         .++..|+.|..+
T Consensus       298 -------------------~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~---------~pVA~fk~Hk~p  349 (440)
T KOG0302|consen  298 -------------------TKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG---------QPVATFKYHKAP  349 (440)
T ss_pred             -------------------eeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC---------CcceeEEeccCC
Confidence                               15699999999999  338999999999999999987654         668999999999


Q ss_pred             EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      |+++.|.+.. ...|++++.|..|.+||+...
T Consensus       350 ItsieW~p~e-~s~iaasg~D~QitiWDlsvE  380 (440)
T KOG0302|consen  350 ITSIEWHPHE-DSVIAASGEDNQITIWDLSVE  380 (440)
T ss_pred             eeEEEecccc-CceEEeccCCCcEEEEEeecc
Confidence            9999998854 567788888999999999754

>KOG0268|consensus

Probab=99.96  E-value=2.1e-28  Score=180.12  Aligned_cols=232  Identities=15%  Similarity=0.218  Sum_probs=179.7

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      -.|.+.|.|++=+|..-   ..+|+|+.||.|+|||+.+.+++..+++|.+.|..|++..   ..+++++.|.+|+.|.+
T Consensus        63 ~gHrdGV~~lakhp~~l---s~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   63 DGHRDGVSCLAKHPNKL---STVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             cccccccchhhcCcchh---hhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc---cceEEecCCcceeeeec
Confidence            35889999999999874   4899999999999999999999999999999999999986   57888888999998874


Q ss_pred             CC---------------------------cceeeeec--------cccCCCCceEEEEEccCCC-EEEEEecCCcEEEEe
Q psy10348         87 KT---------------------------DICIAIFG--------GVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWD  130 (291)
Q Consensus        87 ~~---------------------------~~~~~~~~--------~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d  130 (291)
                      ..                           |+.+..+.        .+.--...|.++.|+|... .|++++.|+.|.+||
T Consensus       137 ~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD  216 (433)
T KOG0268|consen  137 DGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYD  216 (433)
T ss_pred             cCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEe
Confidence            32                           11111110        0122234567788888655 667777899999999


Q ss_pred             ccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccc
Q psy10348        131 LTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELR  208 (291)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (291)
                      +++..++....                             -...-+.++|+  +..+.++++|..+..||++.....   
T Consensus       217 ~R~~~Pl~KVi-----------------------------~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p---  264 (433)
T KOG0268|consen  217 LRQASPLKKVI-----------------------------LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRP---  264 (433)
T ss_pred             cccCCccceee-----------------------------eeccccceecCccccceeeccccccceehhhhhhccc---
Confidence            99999876654                             22334567887  457889999999999999987643   


Q ss_pred             cCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        209 TNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                              +..+.+|...+..++|+  |-|+-+++||.|.+|+||..+.+...     ...+..--..|.++.||.|.+|
T Consensus       265 --------~~v~~dhvsAV~dVdfs--ptG~EfvsgsyDksIRIf~~~~~~SR-----diYhtkRMq~V~~Vk~S~Dsky  329 (433)
T KOG0268|consen  265 --------LNVHKDHVSAVMDVDFS--PTGQEFVSGSYDKSIRIFPVNHGHSR-----DIYHTKRMQHVFCVKYSMDSKY  329 (433)
T ss_pred             --------chhhcccceeEEEeccC--CCcchhccccccceEEEeecCCCcch-----hhhhHhhhheeeEEEEeccccE
Confidence                    78888888887776666  55999999999999999999987642     1222222357999999999999


Q ss_pred             eeC
Q psy10348        289 LLC  291 (291)
Q Consensus       289 l~s  291 (291)
                      +++
T Consensus       330 i~S  332 (433)
T KOG0268|consen  330 IIS  332 (433)
T ss_pred             EEe
Confidence            975

>KOG0772|consensus

Probab=99.96  E-value=1.9e-27  Score=182.72  Aligned_cols=236  Identities=17%  Similarity=0.282  Sum_probs=177.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE------------EEeeeccceeEEEEecCCCcEEEEe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR------------HFYGHGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      .....|+++.|++.++    .|++.+.....+|+|-...+.+.            .-++|...+++.+|+|.+...++|+
T Consensus       212 ~E~h~i~sl~ys~Tg~----~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~  287 (641)
T KOG0772|consen  212 CETHQINSLQYSVTGD----QILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTC  287 (641)
T ss_pred             ccccccceeeecCCCC----eEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEe
Confidence            4568899999999885    66666667899999976333222            2368999999999999888999999


Q ss_pred             ecCCeEEEEECCCcc-eeeeec--cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348         76 SKDHTLRLWNIKTDI-CIAIFG--GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST  152 (291)
Q Consensus        76 ~~dg~i~vwd~~~~~-~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~  152 (291)
                      +.||++++||+...+ ....+.  ...+..-+++.++|+++|+.||+|+.||+|.+|+.......               
T Consensus       288 s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~---------------  352 (641)
T KOG0772|consen  288 SYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVR---------------  352 (641)
T ss_pred             cCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccc---------------
Confidence            999999999997543 233332  12345567899999999999999999999999998655432               


Q ss_pred             ccccCccccCcccccccccCc--ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRN--YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                +.+...++|..  .|+||.|+  |++|++-+.|+++++||++..+..           +....+-...-.
T Consensus       353 ----------p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp-----------L~~~tgL~t~~~  411 (641)
T KOG0772|consen  353 ----------PVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP-----------LNVRTGLPTPFP  411 (641)
T ss_pred             ----------cceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccc-----------hhhhcCCCccCC
Confidence                      22334456877  89999998  999999999999999999987643           444444443333


Q ss_pred             EEEEEecCCCcEEEEEcC------CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        229 FIRFSMDYWQKILAVGNQ------SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      ...++++|+.++|++|+.      .|++.+||..+.+.+    ..+..  ....|..+.|+|.=+.|
T Consensus       412 ~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v----~ki~i--~~aSvv~~~WhpkLNQi  472 (641)
T KOG0772|consen  412 GTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTV----YKIDI--STASVVRCLWHPKLNQI  472 (641)
T ss_pred             CCccccCCCceEEEecccccCCCCCceEEEEeccceeeE----EEecC--CCceEEEEeecchhhhe
Confidence            445678888999999863      568999998887532    22222  24678889999975444

>KOG0641|consensus

Probab=99.96  E-value=9.8e-26  Score=156.54  Aligned_cols=236  Identities=17%  Similarity=0.229  Sum_probs=182.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--cc---eeEEEeeeccceeEEEEec---CCCcEEEEee-cC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--HA---CVRHFYGHGHAINELKFHP---QDFNLLLSVS-KD   78 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--~~---~~~~~~~~~~~v~~~~~~~---~~~~~l~s~~-~d   78 (291)
                      .|.+.|+|.+|||+++    ++|+|+.|.+|++.-.+.  .+   .-..+.-|.+.|..++|..   ..+.+|++++ .|
T Consensus        87 hhkgsiyc~~ws~~ge----liatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd  162 (350)
T KOG0641|consen   87 HHKGSIYCTAWSPCGE----LIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD  162 (350)
T ss_pred             ccCccEEEEEecCccC----eEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence            5789999999999995    999999999999876542  22   1235677999999999964   2345777754 47


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      ..|++-|..+|+....+   .+|.+-|.++ ++-++-.+++|+.|.+|++||++-..++.++...+  ...         
T Consensus       163 c~iy~tdc~~g~~~~a~---sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~--~~~---------  227 (350)
T KOG0641|consen  163 CKIYITDCGRGQGFHAL---SGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDF--HDG---------  227 (350)
T ss_pred             ceEEEeecCCCCcceee---cCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcc--cCC---------
Confidence            78888899999988888   7999999887 34468899999999999999999888776654211  000         


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                                ......|.+++.+  |.+|++|-.|....+||++.++            .++.+..|...|.++.|+|. 
T Consensus       228 ----------glessavaav~vdpsgrll~sg~~dssc~lydirg~r------------~iq~f~phsadir~vrfsp~-  284 (350)
T KOG0641|consen  228 ----------GLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGR------------MIQRFHPHSADIRCVRFSPG-  284 (350)
T ss_pred             ----------CcccceeEEEEECCCcceeeeccCCCceEEEEeeCCc------------eeeeeCCCccceeEEEeCCC-
Confidence                      0123567788887  8899999999999999999984            48999999999999988865 


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                       ..|+++++.|.+|++-|+...-.-+.  .......|...+..+.|+|..--
T Consensus       285 -a~yllt~syd~~ikltdlqgdla~el--~~~vv~ehkdk~i~~rwh~~d~s  333 (350)
T KOG0641|consen  285 -AHYLLTCSYDMKIKLTDLQGDLAHEL--PIMVVAEHKDKAIQCRWHPQDFS  333 (350)
T ss_pred             -ceEEEEecccceEEEeecccchhhcC--ceEEEEeccCceEEEEecCccce
Confidence             89999999999999999986432111  22222256677888899997543

>KOG0283|consensus

Probab=99.95  E-value=1.7e-27  Score=192.59  Aligned_cols=195  Identities=21%  Similarity=0.284  Sum_probs=151.3

Q ss_pred             eEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc----------------------------e--------
Q psy10348         49 VRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI----------------------------C--------   91 (291)
Q Consensus        49 ~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~----------------------------~--------   91 (291)
                      .+.++ +|.+.|.++.|++ +|++||+|+.||.|+||.+...+                            .        
T Consensus       259 ~Qe~~~ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s  337 (712)
T KOG0283|consen  259 VQEISNAHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS  337 (712)
T ss_pred             eeccccccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence            34556 8999999999999 99999999999999999875400                            0        


Q ss_pred             ---------------------eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCC
Q psy10348         92 ---------------------IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPAR  150 (291)
Q Consensus        92 ---------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~  150 (291)
                                           ...+..+.+|.+.|..+.|+.+ ++|++++.|.+||+|++...+++..|.         
T Consensus       338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~---------  407 (712)
T KOG0283|consen  338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS---------  407 (712)
T ss_pred             ccccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe---------
Confidence                                 0011225899999999999965 589999999999999999999988876         


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                                          |.+.|+||+|+   .++|++|+-||.++||++...+             +..+..-..-|
T Consensus       408 --------------------HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~-------------Vv~W~Dl~~lI  454 (712)
T KOG0283|consen  408 --------------------HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK-------------VVDWNDLRDLI  454 (712)
T ss_pred             --------------------cCCeeEEEEecccCCCcEeecccccceEEeecCcCe-------------eEeehhhhhhh
Confidence                                99999999999   6799999999999999997753             33333334567


Q ss_pred             EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec---cccccceeeeEEccCCc--eee
Q psy10348        228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH---PRCMSAVRQTTLSKNGN--VLL  290 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~g~--~l~  290 (291)
                      +++++.  |||++.++|+.+|.+++|+....+........+..   ..|. .|++++|.|...  .|+
T Consensus       455 TAvcy~--PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLV  519 (712)
T KOG0283|consen  455 TAVCYS--PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLV  519 (712)
T ss_pred             eeEEec--cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEE
Confidence            776666  55999999999999999999987543222111110   1233 799999998544  554

>KOG0306|consensus

Probab=99.95  E-value=1.2e-26  Score=185.72  Aligned_cols=199  Identities=17%  Similarity=0.275  Sum_probs=175.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-----ccee--------EEEeeeccceeEEEEecCCCcEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-----HACV--------RHFYGHGHAINELKFHPQDFNLLLS   74 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-----~~~~--------~~~~~~~~~v~~~~~~~~~~~~l~s   74 (291)
                      .|++.|.+++.+||+    ..+++|+.|.+|++||..-     +...        +++ .-++.|.|+.++| |+++||.
T Consensus       452 AHdgaIWsi~~~pD~----~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~Sp-dgk~LaV  525 (888)
T KOG0306|consen  452 AHDGAIWSISLSPDN----KGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSVSP-DGKLLAV  525 (888)
T ss_pred             ccccceeeeeecCCC----CceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEEcC-CCcEEEE
Confidence            689999999999999    5999999999999999641     1111        122 2457899999999 9999999


Q ss_pred             eecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348         75 VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~  154 (291)
                      +--|.+|+||-+.+-+....+   .+|.-||.|+..+|+++.++||+.|..|++|-++-|.+.+.+-             
T Consensus       526 sLLdnTVkVyflDtlKFflsL---YGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~f-------------  589 (888)
T KOG0306|consen  526 SLLDNTVKVYFLDTLKFFLSL---YGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFF-------------  589 (888)
T ss_pred             EeccCeEEEEEecceeeeeee---cccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhh-------------
Confidence            999999999999988877777   7999999999999999999999999999999999999887764             


Q ss_pred             ccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        155 FDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                                     +|...|.++.|.  ...+.+++.|+.|+-||-...+.            +..+.+|...++++++
T Consensus       590 ---------------AHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~------------iq~L~~H~~ev~cLav  642 (888)
T KOG0306|consen  590 ---------------AHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEE------------IQKLDGHHSEVWCLAV  642 (888)
T ss_pred             ---------------cccCceeEEEEcccceeEEEecCcceEEeechhhhhh------------heeeccchheeeeeEE
Confidence                           599999999998  45899999999999999888755            8899999999999887


Q ss_pred             EecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        233 SMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       233 ~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      .+  +|.++++++.|.+|++|....
T Consensus       643 ~~--~G~~vvs~shD~sIRlwE~td  665 (888)
T KOG0306|consen  643 SP--NGSFVVSSSHDKSIRLWERTD  665 (888)
T ss_pred             cC--CCCeEEeccCCceeEeeeccC
Confidence            75  499999999999999999876

>KOG0288|consensus

Probab=99.95  E-value=4e-28  Score=181.39  Aligned_cols=229  Identities=21%  Similarity=0.308  Sum_probs=189.9

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      -.|...+..+.|-++.    ..|++|+.|..|++|+...++  .+.++.+..++|+++.|.+ ++.++++++.|+.+++|
T Consensus       172 d~h~gev~~v~~l~~s----dtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~-~~~~~iAas~d~~~r~W  246 (459)
T KOG0288|consen  172 DAHEGEVHDVEFLRNS----DTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDS-DNKHVIAASNDKNLRLW  246 (459)
T ss_pred             hccccccceeEEccCc----chhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecC-CCceEEeecCCCceeee
Confidence            3688999999999986    399999999999999987665  6777888889999999999 88999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++...+...++   .+|.+.|+++.|......+++|+.|.+|++||+....+.++..                       
T Consensus       247 nvd~~r~~~TL---sGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-----------------------  300 (459)
T KOG0288|consen  247 NVDSLRLRHTL---SGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-----------------------  300 (459)
T ss_pred             eccchhhhhhh---cccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-----------------------
Confidence            99999988888   7999999999998877779999999999999999987765543                       


Q ss_pred             cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                            ....+..|...+..+++|..|++|++||.++...            ......+. .|+++..+++  +..|.+.
T Consensus       301 ------~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~------------~~sv~~gg-~vtSl~ls~~--g~~lLss  359 (459)
T KOG0288|consen  301 ------PGSQCNDIVCSISDVISGHFDKKVRFWDIRSADK------------TRSVPLGG-RVTSLDLSMD--GLELLSS  359 (459)
T ss_pred             ------ccccccceEecceeeeecccccceEEEeccCCce------------eeEeecCc-ceeeEeeccC--CeEEeee
Confidence                  3344556666677889999999999999998854            56666555 6777777655  9999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEec--cccccceeeeEEccCCceeeC
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSH--PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.|.++.+.|+++.+..    .++.-  .......+.+.|||++.|+|+
T Consensus       360 sRDdtl~viDlRt~eI~----~~~sA~g~k~asDwtrvvfSpd~~YvaA  404 (459)
T KOG0288|consen  360 SRDDTLKVIDLRTKEIR----QTFSAEGFKCASDWTRVVFSPDGSYVAA  404 (459)
T ss_pred             cCCCceeeeecccccEE----EEeeccccccccccceeEECCCCceeee
Confidence            99999999999997532    33322  133456899999999999986

>KOG0299|consensus

Probab=99.95  E-value=3.9e-26  Score=173.01  Aligned_cols=234  Identities=18%  Similarity=0.168  Sum_probs=189.4

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE----E-------------E-eeeccceeEEEEecC
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR----H-------------F-YGHGHAINELKFHPQ   67 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~----~-------------~-~~~~~~v~~~~~~~~   67 (291)
                      .-.|..++.|++++|+.    .+.++++.+|+|.=|++.+++..+    .             - +.|...+.+++.++ 
T Consensus       138 ~~~H~~s~~~vals~d~----~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~-  212 (479)
T KOG0299|consen  138 IGKHQLSVTSVALSPDD----KRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS-  212 (479)
T ss_pred             eccccCcceEEEeeccc----cceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC-
Confidence            34688999999999999    499999999999999998876331    1             1 26788999999999 


Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      |+++||+|+.|..|.||+.++.+.++.+   .+|.+.|.+++|-.....|++++.|+++++|+++....+.++.      
T Consensus       213 Dgkylatgg~d~~v~Iw~~~t~ehv~~~---~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetly------  283 (479)
T KOG0299|consen  213 DGKYLATGGRDRHVQIWDCDTLEHVKVF---KGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLY------  283 (479)
T ss_pred             CCcEEEecCCCceEEEecCcccchhhcc---cccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHh------
Confidence            9999999999999999999999999998   8999999999998888899999999999999999988777664      


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                                            +|...|..+.-.  +..+-+|+.|+++++|++....             ...+.++..
T Consensus       284 ----------------------GHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees-------------qlifrg~~~  328 (479)
T KOG0299|consen  284 ----------------------GHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEES-------------QLIFRGGEG  328 (479)
T ss_pred             ----------------------CCccceeeechhcccceEEeccccceeEEEeccccc-------------eeeeeCCCC
Confidence                                  599999998776  5566677799999999994432             345666777


Q ss_pred             cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe------ccccccceeeeEEccCCceeeC
Q psy10348        226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS------HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+.+++|--   ...+++|++||.|.+|++...+++-.......      .-.+...|++|+..|...++|+
T Consensus       329 sidcv~~In---~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~as  397 (479)
T KOG0299|consen  329 SIDCVAFIN---DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLAS  397 (479)
T ss_pred             CeeeEEEec---ccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEe
Confidence            788887753   68999999999999999998875421111000      0011237899999998888764

>KOG0308|consensus

Probab=99.95  E-value=2.5e-27  Score=186.54  Aligned_cols=205  Identities=21%  Similarity=0.295  Sum_probs=178.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEE-ecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKF-HPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .|.+.|+.++...++    +.|++++.|-+|++|+...+  -++.++..|.+.|.|+++ -+ +..++|+|+.|+.|.+|
T Consensus        71 ~HsDWVNDiiL~~~~----~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak-~~~lvaSgGLD~~IflW  145 (735)
T KOG0308|consen   71 HHSDWVNDIILCGNG----KTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAK-NNELVASGGLDRKIFLW  145 (735)
T ss_pred             hhHhHHhhHHhhcCC----CceEEecCCceEEEeecccCcchhHhhhhcccchheeeeeccc-CceeEEecCCCccEEEE
Confidence            467888888888888    49999999999999999877  577888999999999999 55 88999999999999999


Q ss_pred             ECCCcc--eeeeec-----ccc-CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         85 NIKTDI--CIAIFG-----GVE-GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        85 d~~~~~--~~~~~~-----~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      |++++.  .+..+.     .+. ++...|++++.++.|..|++|+..+.+++||.++.+.+..+.               
T Consensus       146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr---------------  210 (735)
T KOG0308|consen  146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR---------------  210 (735)
T ss_pred             EccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee---------------
Confidence            999873  222221     223 889999999999999999999999999999999988665543               


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                                   +|..-|.++..+  |..+++++.||+|++||++..++            +.++..|...+|++...+
T Consensus       211 -------------GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrC------------l~T~~vH~e~VWaL~~~~  265 (735)
T KOG0308|consen  211 -------------GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRC------------LATYIVHKEGVWALQSSP  265 (735)
T ss_pred             -------------ccccceEEEEEcCCCCeEeecCCCceEEeeeccccce------------eeeEEeccCceEEEeeCC
Confidence                         699999999998  88999999999999999998855            889999999999888774


Q ss_pred             cCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        235 DYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       235 ~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                        +=..+++|+.||.|..=|+++..
T Consensus       266 --sf~~vYsG~rd~~i~~Tdl~n~~  288 (735)
T KOG0308|consen  266 --SFTHVYSGGRDGNIYRTDLRNPA  288 (735)
T ss_pred             --CcceEEecCCCCcEEecccCCch
Confidence              48899999999999999999853

>KOG2445|consensus

Probab=99.95  E-value=2e-25  Score=161.29  Aligned_cols=247  Identities=15%  Similarity=0.295  Sum_probs=180.5

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----cceeEEEeeeccceeEEEE-ecCCCcEEEEeecCC
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----HACVRHFYGHGHAINELKF-HPQDFNLLLSVSKDH   79 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~dg   79 (291)
                      +...|.+-|.|+.|.+.|    +.+|+|+.|++|+|||.++    ..+....+.|.+.|..+.| +|.-|+.+|+++.|+
T Consensus         8 i~s~h~DlihdVs~D~~G----RRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Dr   83 (361)
T KOG2445|consen    8 IDSGHKDLIHDVSFDFYG----RRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDR   83 (361)
T ss_pred             cccCCcceeeeeeecccC----ceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCC
Confidence            445678899999999999    5999999999999999643    3566778899999999999 455689999999999


Q ss_pred             eEEEEECCCc------ceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCch------hhhhhc----
Q psy10348         80 TLRLWNIKTD------ICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPE------IKDACA----  141 (291)
Q Consensus        80 ~i~vwd~~~~------~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~------~~~~~~----  141 (291)
                      ++.||.-...      +.-.....+......|+.++|.|.  |-.|++++.||.+|||+.....      +...+.    
T Consensus        84 tv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~  163 (361)
T KOG2445|consen   84 TVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVID  163 (361)
T ss_pred             ceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccC
Confidence            9999975211      111111223677889999999996  6689999999999999865432      222222    


Q ss_pred             ---------cccccCCCCcccccc--------------------CccccCcccccccccCcceeEEEEc---C---CEEE
Q psy10348        142 ---------ESYTFNPARSTRPFD--------------------TQKEHFPQFSTRDIHRNYVDCVRWL---G---DFVL  186 (291)
Q Consensus       142 ---------~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~v~~~~~~---~---~~l~  186 (291)
                               .++.++|.....+..                    ........+..+..|..+|+.++|.   |   .+|+
T Consensus       164 pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lA  243 (361)
T KOG2445|consen  164 PPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLA  243 (361)
T ss_pred             CcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEE
Confidence                     133344332221110                    0011223444556899999999997   3   3799


Q ss_pred             EecCCCeEEEecCCCCCcc--------ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        187 SKSCENCIICWKPGRLEDK--------ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       187 ~~~~d~~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      +++.|| |+||.+......        .....+.++..+..+..|++.+|.++|...  |..|++.+.||.||+|...-.
T Consensus       244 vA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmt--GtiLsStGdDG~VRLWkany~  320 (361)
T KOG2445|consen  244 VATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMT--GTILSSTGDDGCVRLWKANYN  320 (361)
T ss_pred             EeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeee--eeEEeecCCCceeeehhhhhh
Confidence            999999 999999854321        111223455678889999999999999988  999999999999999987644

>KOG1407|consensus

Probab=99.95  E-value=3.6e-27  Score=166.52  Aligned_cols=220  Identities=19%  Similarity=0.289  Sum_probs=167.5

Q ss_pred             EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEE
Q psy10348         50 RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKL  128 (291)
Q Consensus        50 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v  128 (291)
                      +.+++|...|.+++|+. +|..|++|+.|+++.+|+++..+....+ ...+|.+.|-.++|+|. ...|++++.|.+|++
T Consensus        14 r~~~~~~~~v~Sv~wn~-~g~~lasgs~dktv~v~n~e~~r~~~~~-~~~gh~~svdql~w~~~~~d~~atas~dk~ir~   91 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNC-DGTKLASGSFDKTVSVWNLERDRFRKEL-VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI   91 (313)
T ss_pred             HHhhhhhhcceEEEEcc-cCceeeecccCCceEEEEecchhhhhhh-cccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence            45678999999999999 9999999999999999999877555443 23789999999999885 458999999999999


Q ss_pred             EeccCchhhhhhcc-----ccccCCCCccccccCccccCcccccc-------cccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348        129 WDLTKPEIKDACAE-----SYTFNPARSTRPFDTQKEHFPQFSTR-------DIHRNYVDCVRWL--GDFVLSKSCENCI  194 (291)
Q Consensus       129 ~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~--~~~l~~~~~d~~i  194 (291)
                      ||.+.+++......     .+.+.|.+..............+...       ....-.+..+.|+  +++++....-|+|
T Consensus        92 wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v  171 (313)
T KOG1407|consen   92 WDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCV  171 (313)
T ss_pred             EEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceE
Confidence            99999998876653     34566766655554433332222111       1123446677776  5566666667888


Q ss_pred             EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348        195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM  274 (291)
Q Consensus       195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~  274 (291)
                      .|......            +++.+++.|..  .++++.++|+|+++|+|+.|-.+.+||+...-+.+      ....+.
T Consensus       172 ~ILsypsL------------kpv~si~AH~s--nCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R------~isRld  231 (313)
T KOG1407|consen  172 EILSYPSL------------KPVQSIKAHPS--NCICIEFDPDGRYFATGSADALVSLWDVDELICER------CISRLD  231 (313)
T ss_pred             EEEecccc------------ccccccccCCc--ceEEEEECCCCceEeeccccceeeccChhHhhhhe------eecccc
Confidence            88887765            44888888874  56667777889999999999999999999875432      223567


Q ss_pred             cceeeeEEccCCceeeC
Q psy10348        275 SAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       275 ~~v~~~~~s~~g~~l~s  291 (291)
                      -+|+.+.||.||++||+
T Consensus       232 wpVRTlSFS~dg~~lAS  248 (313)
T KOG1407|consen  232 WPVRTLSFSHDGRMLAS  248 (313)
T ss_pred             CceEEEEeccCcceeec
Confidence            79999999999999985

>KOG2096|consensus

Probab=99.95  E-value=4.7e-26  Score=165.41  Aligned_cols=244  Identities=14%  Similarity=0.159  Sum_probs=171.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----e-------------------------------eEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----C-------------------------------VRH   51 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----~-------------------------------~~~   51 (291)
                      .|.+.|++++|+.|+    +.||+++.|+.|++|+++.-.     .                               +..
T Consensus        84 gH~~~vt~~~FsSdG----K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~v  159 (420)
T KOG2096|consen   84 GHKKEVTDVAFSSDG----KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV  159 (420)
T ss_pred             ccCCceeeeEEcCCC----ceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence            478999999999999    699999999999999986421     0                               000


Q ss_pred             E-----------------------eeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEE
Q psy10348         52 F-----------------------YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSA  108 (291)
Q Consensus        52 ~-----------------------~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~  108 (291)
                      +                       +.|.-.+..+-... ++.+|++++.|..|.+|+++ |+.+..+   ......-+..
T Consensus       160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~i---dtnq~~n~~a  234 (420)
T KOG2096|consen  160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSI---DTNQSSNYDA  234 (420)
T ss_pred             EEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeee---ccccccccce
Confidence            0                       01122333333333 66899999999999999999 8888887   4555566788


Q ss_pred             EEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEE
Q psy10348        109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVL  186 (291)
Q Consensus       109 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  186 (291)
                      +.+|+|+++++++----|++|.+--++- .+++                   .......+.+|...|..++|+  ...++
T Consensus       235 avSP~GRFia~~gFTpDVkVwE~~f~kd-G~fq-------------------ev~rvf~LkGH~saV~~~aFsn~S~r~v  294 (420)
T KOG2096|consen  235 AVSPDGRFIAVSGFTPDVKVWEPIFTKD-GTFQ-------------------EVKRVFSLKGHQSAVLAAAFSNSSTRAV  294 (420)
T ss_pred             eeCCCCcEEEEecCCCCceEEEEEeccC-cchh-------------------hhhhhheeccchhheeeeeeCCCcceeE
Confidence            9999999999999988899998743221 0000                   011223456799999999998  56999


Q ss_pred             EecCCCeEEEecCCCCCccccccCCCceeeeeee--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce
Q psy10348        187 SKSCENCIICWKPGRLEDKELRTNETNVTIINRL--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK  264 (291)
Q Consensus       187 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~  264 (291)
                      +.+.||++++||+.-.......+     +.++..  ..+...-.-++++.+|+|+.||.+.. ..++++..++++...  
T Consensus       295 tvSkDG~wriwdtdVrY~~~qDp-----k~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~--  366 (420)
T KOG2096|consen  295 TVSKDGKWRIWDTDVRYEAGQDP-----KILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYP--  366 (420)
T ss_pred             EEecCCcEEEeeccceEecCCCc-----hHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccch--
Confidence            99999999999986432211111     112222  11222222346777788999988764 479999999986432  


Q ss_pred             eEEEeccccccceeeeEEccCCceeeC
Q psy10348        265 FQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       265 ~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        .+ ...|+..|.+++|+++|+++++
T Consensus       367 --~~-e~~h~~~Is~is~~~~g~~~at  390 (420)
T KOG2096|consen  367 --EL-EDIHSTTISSISYSSDGKYIAT  390 (420)
T ss_pred             --hH-HHhhcCceeeEEecCCCcEEee
Confidence              22 2368889999999999999985

>KOG0321|consensus

Probab=99.95  E-value=1.9e-26  Score=181.24  Aligned_cols=241  Identities=15%  Similarity=0.191  Sum_probs=182.1

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .+.|...|..+.|-|..    ..|++++.|.++++||+++.++...  +.+|.+.|.+++|.|.+...|++|+.||.|.|
T Consensus        96 ~~aH~nAifDl~wapge----~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~ill  171 (720)
T KOG0321|consen   96 PLAHKNAIFDLKWAPGE----SLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILL  171 (720)
T ss_pred             cccccceeEeeccCCCc----eeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEE
Confidence            46789999999999954    5999999999999999999988766  88999999999999999999999999999999


Q ss_pred             EECCCcc--------------------eeee----eccccCCCCceEE---EEEccCCCEEEEEec-CCcEEEEeccCch
Q psy10348         84 WNIKTDI--------------------CIAI----FGGVEGHRDEVLS---ADFDLLGTKIMSCGM-DHSLKLWDLTKPE  135 (291)
Q Consensus        84 wd~~~~~--------------------~~~~----~~~~~~~~~~i~~---~~~~~~~~~l~~~~~-d~~i~v~d~~~~~  135 (291)
                      ||++-..                    +.+.    ...-..+...|.+   +.+..|...|++++. |+.|+|||++...
T Consensus       172 WD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~  251 (720)
T KOG0321|consen  172 WDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY  251 (720)
T ss_pred             EEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence            9986322                    0000    0011334455555   666788899999988 9999999999877


Q ss_pred             hhhhhccccccCCCCccccccCccccCccccccccc---CcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH---RNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN  210 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  210 (291)
                      .......      ..              ......|   .-.+.++..+  |.+|++.+.|+.|.+|++.....      
T Consensus       252 ~~~r~ep------~~--------------~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~------  305 (720)
T KOG0321|consen  252 TAYRQEP------RG--------------SDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSI------  305 (720)
T ss_pred             cccccCC------Cc--------------ccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCc------
Confidence            5433221      00              0000011   2335555555  88888888899999999987654      


Q ss_pred             CCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        211 ETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       211 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                          .++..+.++...-..++-..+|++.+|++|+.|...++|.+.+.+.     ......+|.-.|++++|.|.
T Consensus       306 ----sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~-----~~~~l~Ght~eVt~V~w~pS  371 (720)
T KOG0321|consen  306 ----SPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA-----PPALLLGHTREVTTVRWLPS  371 (720)
T ss_pred             ----CchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC-----ChhhhhCcceEEEEEeeccc
Confidence                4566666666655666777789999999999999999999998764     22223378889999999874

>KOG2055|consensus

Probab=99.95  E-value=8.3e-26  Score=171.38  Aligned_cols=234  Identities=14%  Similarity=0.180  Sum_probs=186.3

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRLWN   85 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd   85 (291)
                      -...|+++.|+|..    +++++++.||+++||.++  +...++.+.--..+|.+.+|.| +|. .+++++....++.||
T Consensus       212 s~~~I~sv~FHp~~----plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p-~G~~~i~~s~rrky~ysyD  286 (514)
T KOG2055|consen  212 SHGGITSVQFHPTA----PLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAP-NGHSVIFTSGRRKYLYSYD  286 (514)
T ss_pred             CcCCceEEEecCCC----ceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecC-CCceEEEecccceEEEEee
Confidence            35889999999998    599999999999999876  3346677766678999999999 666 999999999999999


Q ss_pred             CCCcceeeeeccccCCC-CceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKTDICIAIFGGVEGHR-DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      +.+.+..+. ..+.++. ..+.....+|++++|+..+..|.|.+.-..+++.+..++                       
T Consensus       287 le~ak~~k~-~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-----------------------  342 (514)
T KOG2055|consen  287 LETAKVTKL-KPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-----------------------  342 (514)
T ss_pred             ccccccccc-cCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-----------------------
Confidence            998765433 2223443 356778899999999999999999999999999887766                       


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                            -++.|..+.|+  +..|++.+.+|.|.+||++...+            ++.+... +.+....+++++++.|||
T Consensus       343 ------ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~------------~~rf~D~-G~v~gts~~~S~ng~ylA  403 (514)
T KOG2055|consen  343 ------IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSC------------LHRFVDD-GSVHGTSLCISLNGSYLA  403 (514)
T ss_pred             ------eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcce------------EEEEeec-CccceeeeeecCCCceEE
Confidence                  57779999998  77888888899999999998743            6666543 446677888888999999


Q ss_pred             EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        243 VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|+..|.|.|||.++.-.-...............|++++|+||++.||
T Consensus       404 ~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLA  451 (514)
T KOG2055|consen  404 TGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILA  451 (514)
T ss_pred             eccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhh
Confidence            999999999999765321111112222234456899999999999876

>KOG0643|consensus

Probab=99.95  E-value=1e-25  Score=159.70  Aligned_cols=196  Identities=16%  Similarity=0.290  Sum_probs=160.7

Q ss_pred             EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         51 HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        51 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      .+++|+.+++.+.++. +|++|++++.|.+..||-...|+.+..+   .+|.+.|+|++.+-+.+.+++|+.|.++++||
T Consensus         5 ~l~GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGty---~GHtGavW~~Did~~s~~liTGSAD~t~kLWD   80 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGTY---DGHTGAVWCCDIDWDSKHLITGSADQTAKLWD   80 (327)
T ss_pred             ccccCccccceEEecC-CCcEEEEecCCCCceEEEecCCceeeee---cCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence            4678999999999999 9999999999999999988889999998   89999999999999999999999999999999


Q ss_pred             ccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-----CCeEEEecCCCCC
Q psy10348        131 LTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-----ENCIICWKPGRLE  203 (291)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-----d~~i~iwd~~~~~  203 (291)
                      +.+|+.+..++                             ...+|..+.|+  |++++....     .+.|.++|++...
T Consensus        81 v~tGk~la~~k-----------------------------~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~  131 (327)
T KOG0643|consen   81 VETGKQLATWK-----------------------------TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDS  131 (327)
T ss_pred             cCCCcEEEEee-----------------------------cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCCh
Confidence            99999988776                             56779999998  666655443     4689999998554


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      ...     ....++..+..+...++..-|.  |-+++|++|..||.|..||+++++.     ..-....|+..|+.++++
T Consensus       132 ~~~-----~s~ep~~kI~t~~skit~a~Wg--~l~~~ii~Ghe~G~is~~da~~g~~-----~v~s~~~h~~~Ind~q~s  199 (327)
T KOG0643|consen  132 SDI-----DSEEPYLKIPTPDSKITSALWG--PLGETIIAGHEDGSISIYDARTGKE-----LVDSDEEHSSKINDLQFS  199 (327)
T ss_pred             hhh-----cccCceEEecCCccceeeeeec--ccCCEEEEecCCCcEEEEEcccCce-----eeechhhhcccccccccc
Confidence            211     1113355566666666665555  5599999999999999999999853     223334678899999999


Q ss_pred             cCCceeeC
Q psy10348        284 KNGNVLLC  291 (291)
Q Consensus       284 ~~g~~l~s  291 (291)
                      ||..++++
T Consensus       200 ~d~T~FiT  207 (327)
T KOG0643|consen  200 RDRTYFIT  207 (327)
T ss_pred             CCcceEEe
Confidence            99998764

>KOG0640|consensus

Probab=99.95  E-value=4.4e-26  Score=165.09  Aligned_cols=214  Identities=14%  Similarity=0.225  Sum_probs=168.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce---eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC---VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .|-++|+++.|+|...    +|++|+.|++|++||......   .+.++ ...+|.++.|+| .|.+|+.|..-.++++|
T Consensus       170 DH~devn~l~FHPre~----ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHP-sGefllvgTdHp~~rlY  243 (430)
T KOG0640|consen  170 DHVDEVNDLDFHPRET----ILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHP-SGEFLLVGTDHPTLRLY  243 (430)
T ss_pred             hccCcccceeecchhh----eEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecC-CCceEEEecCCCceeEE
Confidence            4789999999999984    999999999999999875432   23333 357899999999 99999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |+++-++...-..-.+|.+.|+++.+++.+++.++|+.||.|++||--+++++.++..                      
T Consensus       244 dv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~----------------------  301 (430)
T KOG0640|consen  244 DVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGN----------------------  301 (430)
T ss_pred             eccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHh----------------------
Confidence            9999888766544478999999999999999999999999999999999999988863                      


Q ss_pred             ccccccc-CcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC-------------------------Cceee
Q psy10348        165 FSTRDIH-RNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE-------------------------TNVTI  216 (291)
Q Consensus       165 ~~~~~~~-~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------------------~~~~~  216 (291)
                           +| ...|++..|.  ++++++.+.|..+++|.+.+++......+-                         +....
T Consensus       302 -----AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~s  376 (430)
T KOG0640|consen  302 -----AHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNS  376 (430)
T ss_pred             -----hcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCc
Confidence                 34 4568888887  889999999999999999888765211110                         00000


Q ss_pred             eee------------ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        217 INR------------LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       217 ~~~------------~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      +..            -.+|.+.+..+.  .+|.+.-+.+++.|-.+|+|--+
T Consensus       377 lcsWdaRtadr~~l~slgHn~a~R~i~--HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  377 LCSWDARTADRVALLSLGHNGAVRWIV--HSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             eeeccccchhhhhhcccCCCCCceEEE--eCCCCCceeeecccceeeeeeec
Confidence            111            123445544443  44668899999999999999654

>KOG0270|consensus

Probab=99.95  E-value=1.6e-26  Score=174.38  Aligned_cols=209  Identities=17%  Similarity=0.236  Sum_probs=164.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|.+++|+-...   ..||+|+.|.+|.+||+.++++...+..|.+.|.++.|+|..+..|++|+.|++|.+.|.+
T Consensus       241 gHTdavl~Ls~n~~~~---nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R  317 (463)
T KOG0270|consen  241 GHTDAVLALSWNRNFR---NVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR  317 (463)
T ss_pred             cchHHHHHHHhccccc---eeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence            4788888999998876   7999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCccccccCccccCccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ........   -...+.|..++|.|... .++++..||+|+-+|+|.. +++.+                          
T Consensus       318 ~~~~s~~~---wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt--------------------------  368 (463)
T KOG0270|consen  318 DPSNSGKE---WKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWT--------------------------  368 (463)
T ss_pred             CccccCce---EEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeE--------------------------
Confidence            53322221   24678899999999755 6778888999999999986 43333                          


Q ss_pred             ccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC-cEE
Q psy10348        166 STRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ-KIL  241 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~l  241 (291)
                        .++|.++|.+++++   .+++++++.|+.|++|++..........        +.+....    ..+++++|+- -++
T Consensus       369 --~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~--------~~~~~~r----l~c~~~~~~~a~~l  434 (463)
T KOG0270|consen  369 --LKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKE--------HSFKLGR----LHCFALDPDVAFTL  434 (463)
T ss_pred             --EEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccc--------ccccccc----eeecccCCCcceEE
Confidence              35699999999998   6799999999999999987654421111        1111111    2234445544 467


Q ss_pred             EEEcCCCcEEEEEcCCCCCCc
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      |.|+..+.++|||+.+...++
T Consensus       435 a~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  435 AFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             EecCccceEEEeecccChhHH
Confidence            888888899999999876543

>KOG1274|consensus

Probab=99.94  E-value=4.5e-25  Score=180.21  Aligned_cols=236  Identities=16%  Similarity=0.110  Sum_probs=188.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|....+.++|.|+++    +|++++.||.|++|+.... +....+..+...|.+++...   .+|++|+.+++|.+|.+
T Consensus        11 aht~G~t~i~~d~~ge----fi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s---~~f~~~s~~~tv~~y~f   83 (933)
T KOG1274|consen   11 AHTGGLTLICYDPDGE----FICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS---NHFLTGSEQNTVLRYKF   83 (933)
T ss_pred             hccCceEEEEEcCCCC----EEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc---cceEEeeccceEEEeeC
Confidence            7889999999999995    9999999999999997655 44445544778888887654   59999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ..++.-..+   ....-++++++++.+|.+++.|+.|-.|++.++........+.                         
T Consensus        84 ps~~~~~iL---~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lr-------------------------  135 (933)
T KOG1274|consen   84 PSGEEDTIL---ARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLR-------------------------  135 (933)
T ss_pred             CCCCcccee---eeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeec-------------------------
Confidence            988876666   5678899999999999999999999999999998887655543                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                         +|.++|.++.|+  +++|++.+.||.|++||+..+........      +..-......-.+...+|+|++..++..
T Consensus       136 ---gh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~------v~k~n~~~~s~i~~~~aW~Pk~g~la~~  206 (933)
T KOG1274|consen  136 ---GHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTG------VDKDNEFILSRICTRLAWHPKGGTLAVP  206 (933)
T ss_pred             ---ccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhccc------CCccccccccceeeeeeecCCCCeEEee
Confidence               599999999999  78999999999999999998765422211      1111111112235567888999999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.|+.|++|+..+.+..    ..+....+...+..++|+|+|+||||
T Consensus       207 ~~d~~Vkvy~r~~we~~----f~Lr~~~~ss~~~~~~wsPnG~YiAA  249 (933)
T KOG1274|consen  207 PVDNTVKVYSRKGWELQ----FKLRDKLSSSKFSDLQWSPNGKYIAA  249 (933)
T ss_pred             ccCCeEEEEccCCceeh----eeecccccccceEEEEEcCCCcEEee
Confidence            99999999999998643    44444445556999999999999986

>KOG0639|consensus

Probab=99.94  E-value=2.1e-26  Score=176.72  Aligned_cols=225  Identities=17%  Similarity=0.289  Sum_probs=188.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ..+.-|++|...||+    +.|++|++-.++.|||+....+  ...+..-.-.+.+++.+| |.++.++++.||.|.|||
T Consensus       463 ~rdnyiRSckL~pdg----rtLivGGeastlsiWDLAapTprikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwD  537 (705)
T KOG0639|consen  463 NRDNYIRSCKLLPDG----RTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWD  537 (705)
T ss_pred             CcccceeeeEecCCC----ceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEE
Confidence            356788999999999    5999999999999999975543  233333345678899999 889999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.....++.|   ++|.+.+.|+..+++|..|-+|+.|.+||.||++++..+....                        
T Consensus       538 Lhnq~~Vrqf---qGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd------------------------  590 (705)
T KOG0639|consen  538 LHNQTLVRQF---QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD------------------------  590 (705)
T ss_pred             cccceeeecc---cCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh------------------------
Confidence            9999999998   8999999999999999999999999999999999998776543                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                           ....|.++.++  +++++.|-..+.+.+-.....+             ...+..|...|..+.|+..  |+++++
T Consensus       591 -----F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-------------kyqlhlheScVLSlKFa~c--GkwfvS  650 (705)
T KOG0639|consen  591 -----FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-------------KYQLHLHESCVLSLKFAYC--GKWFVS  650 (705)
T ss_pred             -----hhhhheecccCCCccceeeecccCcEEEEecCCcc-------------ceeecccccEEEEEEeccc--Cceeee
Confidence                 45678888777  8899999999999988776543             4556667777878777765  999999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+.|+.+..|...-+..      ++.. ...+.|.++..|.|.+||++
T Consensus       651 tGkDnlLnawrtPyGas------iFqs-kE~SsVlsCDIS~ddkyIVT  691 (705)
T KOG0639|consen  651 TGKDNLLNAWRTPYGAS------IFQS-KESSSVLSCDISFDDKYIVT  691 (705)
T ss_pred             cCchhhhhhccCccccc------eeec-cccCcceeeeeccCceEEEe
Confidence            99999999999988852      2222 34579999999999999985

>KOG1539|consensus

Probab=99.94  E-value=4e-25  Score=178.78  Aligned_cols=249  Identities=14%  Similarity=0.171  Sum_probs=179.6

Q ss_pred             eeeeec-ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          5 YSLLIE-ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         5 ~~~~~~-~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      .++.|+ ++|++++|.-||+   +++|+|+..|.+.+||++..+.+..++ .|.+.|....|.| ....+++++.|..++
T Consensus       238 ~sFk~d~g~VtslSFrtDG~---p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-~epVl~ta~~DnSlk  313 (910)
T KOG1539|consen  238 MSFKQDWGRVTSLSFRTDGN---PLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-GEPVLVTAGADNSLK  313 (910)
T ss_pred             EEEEccccceeEEEeccCCC---eeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecC-CCceEeeccCCCcee
Confidence            456675 9999999999998   799999999999999999888877776 8989999999999 889999999999888


Q ss_pred             EEECCCcce-eeeeccccCCC-----------------------------------------------------------
Q psy10348         83 LWNIKTDIC-IAIFGGVEGHR-----------------------------------------------------------  102 (291)
Q Consensus        83 vwd~~~~~~-~~~~~~~~~~~-----------------------------------------------------------  102 (291)
                      +|=.+++.- .+.++...+|.                                                           
T Consensus       314 ~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~  393 (910)
T KOG1539|consen  314 VWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKL  393 (910)
T ss_pred             EEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhh
Confidence            884432211 00000012333                                                           


Q ss_pred             -------------------------------------------------------CceEEEEEccCCCEEEEEecCCcEE
Q psy10348        103 -------------------------------------------------------DEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus       103 -------------------------------------------------------~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                                                                             ..+++++.++.|++.+.|+..|.|-
T Consensus       394 k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id  473 (910)
T KOG1539|consen  394 KLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTID  473 (910)
T ss_pred             cCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEE
Confidence                                                                   3445555555555555555555555


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      +|++++|-....+.                         ....|..+|+.++.+  ++.+++++.+|.+++||.......
T Consensus       474 ~fNmQSGi~r~sf~-------------------------~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~  528 (910)
T KOG1539|consen  474 RFNMQSGIHRKSFG-------------------------DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK  528 (910)
T ss_pred             EEEcccCeeecccc-------------------------cCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee
Confidence            55555554333321                         123599999999998  778999999999999999876532


Q ss_pred             cc-ccC----------------------------CCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        206 EL-RTN----------------------------ETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       206 ~~-~~~----------------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      .. +..                            ....+.++.+.+|...|+.++|+  |||++|++++.|++|++||+.
T Consensus       529 ~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS--~DgrWlisasmD~tIr~wDlp  606 (910)
T KOG1539|consen  529 KSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFS--PDGRWLISASMDSTIRTWDLP  606 (910)
T ss_pred             eeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeC--CCCcEEEEeecCCcEEEEecc
Confidence            00 000                            01123456778888888766555  669999999999999999999


Q ss_pred             CCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        257 VQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++..+       ..-....+..++.|||+|.+||+
T Consensus       607 t~~lI-------D~~~vd~~~~sls~SPngD~LAT  634 (910)
T KOG1539|consen  607 TGTLI-------DGLLVDSPCTSLSFSPNGDFLAT  634 (910)
T ss_pred             Cccee-------eeEecCCcceeeEECCCCCEEEE
Confidence            99532       22234568999999999999985

>KOG1273|consensus

Probab=99.94  E-value=1.1e-25  Score=163.27  Aligned_cols=261  Identities=15%  Similarity=0.206  Sum_probs=163.3

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI   92 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~   92 (291)
                      -.||.|++.|    .+||+|+.||.|.|||..|...-+.+.+|..+|.+++|++ +|+.|+|++.|..|.+||+..|.++
T Consensus        26 a~~~~Fs~~G----~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~-dgr~LltsS~D~si~lwDl~~gs~l  100 (405)
T KOG1273|consen   26 AECCQFSRWG----DYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSR-DGRKLLTSSRDWSIKLWDLLKGSPL  100 (405)
T ss_pred             cceEEeccCc----ceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecC-CCCEeeeecCCceeEEEeccCCCce
Confidence            6799999999    4999999999999999999998889999999999999999 9999999999999999999999988


Q ss_pred             eeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEeccCchh--hh--------hhccccccCCCCccccccCcccc
Q psy10348         93 AIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEI--KD--------ACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        93 ~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      +.+    ....+|..+.|+|..+. .++.-.+..-.+-++..+..  +.        ....+..|.+.++.....+.++.
T Consensus       101 ~ri----rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk  176 (405)
T KOG1273|consen  101 KRI----RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK  176 (405)
T ss_pred             eEE----EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcce
Confidence            776    45666777666664332 22222233344444332110  00        00001112222222222222221


Q ss_pred             Cccc--------cccccc-CcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348        162 FPQF--------STRDIH-RNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       162 ~~~~--------~~~~~~-~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                      ...+        ...... ...|..+.+.  |..|+..+.|..|+.|+++.......   .....+.+.++.--.....-
T Consensus       177 llv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r---~~e~e~~~K~qDvVNk~~Wk  253 (405)
T KOG1273|consen  177 LLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGR---DGEVEPEHKLQDVVNKLQWK  253 (405)
T ss_pred             EEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCc---cCCcChhHHHHHHHhhhhhh
Confidence            1111        001111 2456677776  88999999999999999864321100   00001112222111112233


Q ss_pred             EEEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        231 RFSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++++.+|.|++.|+ ....+++|.-..|.    +.+.+.... ......++|+|-...|+
T Consensus       254 ~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs----LVKILhG~k-gE~l~DV~whp~rp~i~  309 (405)
T KOG1273|consen  254 KCCFSGDGEYVCAGSARAHALYIWEKSIGS----LVKILHGTK-GEELLDVNWHPVRPIIA  309 (405)
T ss_pred             heeecCCccEEEeccccceeEEEEecCCcc----eeeeecCCc-hhheeecccccceeeee
Confidence            456667899998887 55689999999884    345555321 13456677887666554

>KOG0270|consensus

Probab=99.94  E-value=1.5e-25  Score=169.19  Aligned_cols=205  Identities=18%  Similarity=0.230  Sum_probs=164.8

Q ss_pred             eEEEEeeec---cCCCCCEEEEecCCCeEEEEccCCcc---eeE------------------EEeeeccceeEEEEecCC
Q psy10348         13 FYTCAWSMD---LESGRPLLAVAGSRAVIRIFSPAFHA---CVR------------------HFYGHGHAINELKFHPQD   68 (291)
Q Consensus        13 i~~~~~s~~---~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~------------------~~~~~~~~v~~~~~~~~~   68 (291)
                      -.|++|--.   +...|+++|.|+-|..|.|||+.-..   +..                  .-.+|++.|.+|.|+..-
T Consensus       176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~  255 (463)
T KOG0270|consen  176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF  255 (463)
T ss_pred             chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence            356777554   22346799999999999999985211   000                  123699999999999877


Q ss_pred             CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      .+.||+|+.|.+|++||+.++++...+   ..|..+|.++.|+|. ...|++|+.|++|.+.|++........-      
T Consensus       256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~---~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w------  326 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVDTGKPKSSI---THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW------  326 (463)
T ss_pred             ceeEEecCCCceEEEEEcCCCCcceeh---hhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE------
Confidence            789999999999999999999999998   689999999999996 5689999999999999999633211100      


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                                            ...+.|-.++|+   ...++++..||+|+-+|+|....           ++.+++.|.
T Consensus       327 ----------------------k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~-----------~vwt~~AHd  373 (463)
T KOG0270|consen  327 ----------------------KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGK-----------PVWTLKAHD  373 (463)
T ss_pred             ----------------------EeccceEEEEecCCCceeEEEecCCceEEeeecCCCCC-----------ceeEEEecc
Confidence                                  045668889997   56889999999999999998753           389999999


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      ..|..+++...- ..++++++.|+.|++|++....+
T Consensus       374 ~~ISgl~~n~~~-p~~l~t~s~d~~Vklw~~~~~~~  408 (463)
T KOG0270|consen  374 DEISGLSVNIQT-PGLLSTASTDKVVKLWKFDVDSP  408 (463)
T ss_pred             CCcceEEecCCC-CcceeeccccceEEEEeecCCCC
Confidence            999999887642 56889999999999999987653

>KOG0269|consensus

Probab=99.94  E-value=3.4e-26  Score=183.50  Aligned_cols=206  Identities=16%  Similarity=0.191  Sum_probs=170.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      +|+..+.++.|++...   .+|++|+.||+|++||++..+-..++.+..+.|..++|+|..+..|+++...|.+++||++
T Consensus       131 EH~Rs~~~ldfh~tep---~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR  207 (839)
T KOG0269|consen  131 EHERSANKLDFHSTEP---NILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLR  207 (839)
T ss_pred             hhccceeeeeeccCCc---cEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeecc
Confidence            6899999999999876   7999999999999999999888888988899999999999889999999999999999998


Q ss_pred             Cc-ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 TD-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .. ++...+   ..|.++|.|+.|+|++.+|||||.|+.|+|||+.+.+......                         
T Consensus       208 qp~r~~~k~---~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~t-------------------------  259 (839)
T KOG0269|consen  208 QPDRCEKKL---TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHT-------------------------  259 (839)
T ss_pred             CchhHHHHh---hcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeE-------------------------
Confidence            54 344444   7999999999999999999999999999999998755322111                         


Q ss_pred             cccccCcceeEEEEc---CCEEEEecC--CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        167 TRDIHRNYVDCVRWL---GDFVLSKSC--ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~---~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                        -....+|.+|.|-   ...|++++.  |-.|+|||++....+           ..++..|...++.++|.- .|-..+
T Consensus       260 --InTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP-----------~~t~~eH~~~vt~i~W~~-~d~~~l  325 (839)
T KOG0269|consen  260 --INTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIP-----------YATFLEHTDSVTGIAWDS-GDRINL  325 (839)
T ss_pred             --EeecceeeeeeeccCccchhhhhhccccceEEEEeecccccc-----------ceeeeccCccccceeccC-CCceee
Confidence              0134678899997   447787775  889999999887543           678888888888777753 346788


Q ss_pred             EEEcCCCcEEEEEcCCC
Q psy10348        242 AVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~  258 (291)
                      .+++.||+|..-..++.
T Consensus       326 ~s~sKD~tv~qh~~kna  342 (839)
T KOG0269|consen  326 WSCSKDGTVLQHLFKNA  342 (839)
T ss_pred             EeecCccHHHHhhhhcc
Confidence            99999998876666554

>KOG4283|consensus

Probab=99.94  E-value=9.6e-25  Score=157.09  Aligned_cols=221  Identities=18%  Similarity=0.227  Sum_probs=173.6

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc------e----eE-----EEeeeccceeEEEEecC
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA------C----VR-----HFYGHGHAINELKFHPQ   67 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~------~----~~-----~~~~~~~~v~~~~~~~~   67 (291)
                      +.+.-.|.+.|+++..-+...   +++++|+.||.|.|||++...      +    +.     .-.+|+-.|..+.|-|-
T Consensus        36 ~d~~r~HgGsvNsL~id~teg---rymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~  112 (397)
T KOG4283|consen   36 KDFVRPHGGSVNSLQIDLTEG---RYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPI  112 (397)
T ss_pred             cceeccCCCccceeeeccccc---eEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeee
Confidence            456677899999999988754   899999999999999997532      1    11     11367889999999998


Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC---CEEEEEecCCcEEEEeccCchhhhhhcccc
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG---TKIMSCGMDHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                      |..++.+++.|.+++|||..+.+....|    ...+.|++-+|+|-.   .++++|..|-.|++-|+..|.....+    
T Consensus       113 DtGmFtssSFDhtlKVWDtnTlQ~a~~F----~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L----  184 (397)
T KOG4283|consen  113 DTGMFTSSSFDHTLKVWDTNTLQEAVDF----KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL----  184 (397)
T ss_pred             cCceeecccccceEEEeecccceeeEEe----ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee----
Confidence            8899999999999999999999888887    577889999999853   36788888999999999999876655    


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEcCC---EEEEecCCCeEEEecCCCCC-cccc-ccCC-Cceeeee
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD---FVLSKSCENCIICWKPGRLE-DKEL-RTNE-TNVTIIN  218 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~d~~i~iwd~~~~~-~~~~-~~~~-~~~~~~~  218 (291)
                                              .+|...|.++.|++.   .|++|+.||.|++||++... +... ..+. .....++
T Consensus       185 ------------------------sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~  240 (397)
T KOG4283|consen  185 ------------------------SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILK  240 (397)
T ss_pred             ------------------------ccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccc
Confidence                                    369999999999933   78999999999999998652 2211 1111 1112233


Q ss_pred             eecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        219 RLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      .-..|.+.+..+++.  .++.++++.+.|..+++|+..+++.
T Consensus       241 ~n~ah~gkvngla~t--Sd~~~l~~~gtd~r~r~wn~~~G~n  280 (397)
T KOG4283|consen  241 TNTAHYGKVNGLAWT--SDARYLASCGTDDRIRVWNMESGRN  280 (397)
T ss_pred             ccccccceeeeeeec--ccchhhhhccCccceEEeecccCcc
Confidence            345566777776665  5599999999999999999998863

>KOG4328|consensus

Probab=99.94  E-value=7.5e-25  Score=166.04  Aligned_cols=238  Identities=17%  Similarity=0.210  Sum_probs=177.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .+.++|++++|+|..+  .+++|+|..-|.|-+||+.+.    .-+..+..|..+|.+|.|+|.+...+++.+.||+|++
T Consensus       184 v~~~Rit~l~fHPt~~--~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~  261 (498)
T KOG4328|consen  184 VTDRRITSLAFHPTEN--RKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRL  261 (498)
T ss_pred             ecccceEEEEecccCc--ceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeee
Confidence            4679999999999874  258999999999999999533    2355677899999999999999999999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      =|++.+..-..+ .+......+..+.|+.+...++.+..=|.+.+||+++.....                         
T Consensus       262 ~D~~~~i~e~v~-s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~-------------------------  315 (498)
T KOG4328|consen  262 QDFEGNISEEVL-SLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEY-------------------------  315 (498)
T ss_pred             eeecchhhHHHh-hcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccc-------------------------
Confidence            999866433332 113355677889999888888888887899999999876421                         


Q ss_pred             ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                        ..+..|...|+.++++   ..+|++++.|++++|||++.......        ++-....|...|.+..|+|+  +..
T Consensus       316 --~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s--------p~lst~~HrrsV~sAyFSPs--~gt  383 (498)
T KOG4328|consen  316 --ENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS--------PFLSTLPHRRSVNSAYFSPS--GGT  383 (498)
T ss_pred             --hhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC--------cceecccccceeeeeEEcCC--CCc
Confidence              1123488899999998   66999999999999999998755311        12333456677777666654  777


Q ss_pred             EEEEcCCCcEEEEEcC----CCCCCcceeEEEecc----ccccceeeeEEccCCceee
Q psy10348        241 LAVGNQSGRTYVWDLD----VQDPSSIKFQILSHP----RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~----~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~  290 (291)
                      |++.+.|..|+|||..    ...+    ..++.+.    .|- .....+|.|+.++++
T Consensus       384 l~TT~~D~~IRv~dss~~sa~~~p----~~~I~Hn~~t~Rwl-T~fKA~W~P~~~li~  436 (498)
T KOG4328|consen  384 LLTTCQDNEIRVFDSSCISAKDEP----LGTIPHNNRTGRWL-TPFKAAWDPDYNLIV  436 (498)
T ss_pred             eEeeccCCceEEeecccccccCCc----cceeeccCcccccc-cchhheeCCCccEEE
Confidence            9999999999999984    2221    1222222    121 233458999888775

>KOG0267|consensus

Probab=99.94  E-value=1.3e-26  Score=184.61  Aligned_cols=192  Identities=22%  Similarity=0.324  Sum_probs=168.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      -.|+.+|.|+.|+++.    .+|++|+.+|+|++||++.++.++++.+|...+.++.|+| -+.++++|+.|+.+++||+
T Consensus        67 ~~hespIeSl~f~~~E----~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P-~~~~~a~gStdtd~~iwD~  141 (825)
T KOG0267|consen   67 TGHESPIESLTFDTSE----RLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHP-YGEFFASGSTDTDLKIWDI  141 (825)
T ss_pred             eccCCcceeeecCcch----hhhcccccCCceeeeehhhhhhhhhhhccccCcceeeecc-ceEEeccccccccceehhh
Confidence            3588999999999998    5999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +...+...+   .+|...+..+.|+|+|++++.++.|.++++||+..++....|.                         
T Consensus       142 Rk~Gc~~~~---~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~-------------------------  193 (825)
T KOG0267|consen  142 RKKGCSHTY---KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFK-------------------------  193 (825)
T ss_pred             hccCceeee---cCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccc-------------------------
Confidence            988888888   7899999999999999999999999999999999999877664                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                         .|+..+..+.|+  .-++++|+.|+++++||+++.+.            +.........+.+..|.  |+++.+++|
T Consensus       194 ---~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~------------I~s~~~~~~~v~~~~fn--~~~~~~~~G  256 (825)
T KOG0267|consen  194 ---SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEV------------ISSGKPETDGVRSLAFN--PDGKIVLSG  256 (825)
T ss_pred             ---cccccccccccCchhhhhccCCCCceeeeeccceeEE------------eeccCCccCCceeeeec--CCceeeecC
Confidence               488899999988  44888999999999999987643            45555555556555554  669999988


Q ss_pred             cCCC
Q psy10348        245 NQSG  248 (291)
Q Consensus       245 ~~dg  248 (291)
                      ....
T Consensus       257 ~q~s  260 (825)
T KOG0267|consen  257 EQIS  260 (825)
T ss_pred             chhh
Confidence            7654

>KOG1332|consensus

Probab=99.93  E-value=6.9e-25  Score=153.66  Aligned_cols=211  Identities=19%  Similarity=0.311  Sum_probs=159.3

Q ss_pred             eecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC-CcEEEEeecCCeEEE
Q psy10348          8 LIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD-FNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~v   83 (291)
                      .|.++|..++|.. ..   |.+||+++.||.|.||.-++++  .......|+..|++++|.|.+ +-.|+.++.||.|.|
T Consensus        54 Gh~GPVwqv~wahPk~---G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsv  130 (299)
T KOG1332|consen   54 GHSGPVWKVAWAHPKF---GTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSV  130 (299)
T ss_pred             CCCCCeeEEeeccccc---CcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEE
Confidence            4789999999964 32   2599999999999999988774  344556899999999998833 557889999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccC---C-----------CEEEEEecCCcEEEEeccCchhhhhhccccccCCC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLL---G-----------TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~-----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                      .+.+....-..-+....|.-.|+++.|.|.   |           +.|++|+.|..|+||+...++-+..          
T Consensus       131 l~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e----------  200 (299)
T KOG1332|consen  131 LTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLE----------  200 (299)
T ss_pred             EEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhh----------
Confidence            988754111111112689999999999986   4           4699999999999999988642211          


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                                      .++.+|.+.|+.++|.      ...|++++.||++.||..+..... -     ..+.+..   .
T Consensus       201 ----------------~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~-w-----k~tll~~---f  255 (299)
T KOG1332|consen  201 ----------------RTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEP-W-----KKTLLEE---F  255 (299)
T ss_pred             ----------------hhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCc-c-----ccccccc---C
Confidence                            1235699999999997      238999999999999987632111 0     0122222   4


Q ss_pred             cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      ...++.+.|+++  |++|++++.|+.|.+|.-...
T Consensus       256 ~~~~w~vSWS~s--Gn~LaVs~GdNkvtlwke~~~  288 (299)
T KOG1332|consen  256 PDVVWRVSWSLS--GNILAVSGGDNKVTLWKENVD  288 (299)
T ss_pred             CcceEEEEEecc--ccEEEEecCCcEEEEEEeCCC
Confidence            566777777766  999999999999999976543

>KOG0639|consensus

Probab=99.93  E-value=3.3e-25  Score=170.22  Aligned_cols=230  Identities=16%  Similarity=0.236  Sum_probs=180.7

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEe--eeccceeEEEEecCCCcEEEEeecCC
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      ..+.|.+-|.++..|...    +.++||+. |.|+|||+...   .++..+.  .....|.++...| |++.|++|+.-.
T Consensus       414 ~tL~HGEvVcAvtIS~~t----rhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~p-dgrtLivGGeas  487 (705)
T KOG0639|consen  414 NTLAHGEVVCAVTISNPT----RHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLP-DGRTLIVGGEAS  487 (705)
T ss_pred             hhhccCcEEEEEEecCCc----ceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecC-CCceEEeccccc
Confidence            457889999999998776    58999876 78999998632   2333333  3457899999999 999999999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      ++.|||+......... .+......++.++.+||.+..+++..||.|.|||+.+...++.+.                  
T Consensus       488 tlsiWDLAapTprika-eltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrqfq------------------  548 (705)
T KOG0639|consen  488 TLSIWDLAAPTPRIKA-ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQ------------------  548 (705)
T ss_pred             eeeeeeccCCCcchhh-hcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeeccc------------------
Confidence            9999999865443222 124445678899999999999999999999999999998877764                  


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                                +|...+.||..+  |..|-+|+-|++|+.||++++..            +..... ...|..+..+  |+
T Consensus       549 ----------GhtDGascIdis~dGtklWTGGlDntvRcWDlregrq------------lqqhdF-~SQIfSLg~c--P~  603 (705)
T KOG0639|consen  549 ----------GHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQ------------LQQHDF-SSQIFSLGYC--PT  603 (705)
T ss_pred             ----------CCCCCceeEEecCCCceeecCCCccceeehhhhhhhh------------hhhhhh-hhhheecccC--CC
Confidence                      599999999998  88999999999999999998754            222221 2334444444  66


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.+|++|-.++.+.|-.....+.     ..+.  -|++.|.++.|++.|+++++
T Consensus       604 ~dWlavGMens~vevlh~skp~k-----yqlh--lheScVLSlKFa~cGkwfvS  650 (705)
T KOG0639|consen  604 GDWLAVGMENSNVEVLHTSKPEK-----YQLH--LHESCVLSLKFAYCGKWFVS  650 (705)
T ss_pred             ccceeeecccCcEEEEecCCccc-----eeec--ccccEEEEEEecccCceeee
Confidence            99999999999998888776542     2222  57889999999999999875

>KOG1274|consensus

Probab=99.93  E-value=1.2e-23  Score=172.02  Aligned_cols=229  Identities=16%  Similarity=0.185  Sum_probs=179.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      +.+.|++++..  .    .+|++|+.+++|.+|....++.-..+...+-++.+++|+- +|.++|.|+.|-.|++-+..+
T Consensus        55 ~g~~v~~ia~~--s----~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g-~g~~iaagsdD~~vK~~~~~D  127 (933)
T KOG1274|consen   55 SGELVSSIACY--S----NHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSG-SGKMIAAGSDDTAVKLLNLDD  127 (933)
T ss_pred             cCceeEEEeec--c----cceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEec-CCcEEEeecCceeEEEEeccc
Confidence            45666666554  3    3899999999999999998877666666778999999999 999999999999999999998


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ......+   .+|.++|.++.|+|++.+||+.+.||.|++||+.++.+..++.....-+.                    
T Consensus       128 ~s~~~~l---rgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~--------------------  184 (933)
T KOG1274|consen  128 SSQEKVL---RGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNE--------------------  184 (933)
T ss_pred             cchheee---cccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccc--------------------
Confidence            8888888   79999999999999999999999999999999999988777653111000                    


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      ......+..++|+  +..++..+.|+.|++|+...++.            ...+......-....+.|+|+|+|||+++.
T Consensus       185 ~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~------------~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~  252 (933)
T KOG1274|consen  185 FILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWEL------------QFKLRDKLSSSKFSDLQWSPNGKYIAASTL  252 (933)
T ss_pred             ccccceeeeeeecCCCCeEEeeccCCeEEEEccCCcee------------heeecccccccceEEEEEcCCCcEEeeecc
Confidence            0014557788999  56788888899999999988854            333332222222455667788999999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      ||.|.|||..+-+.     .     .....|.+++|.|+.+.|
T Consensus       253 ~g~I~vWnv~t~~~-----~-----~~~~~Vc~~aw~p~~n~i  285 (933)
T KOG1274|consen  253 DGQILVWNVDTHER-----H-----EFKRAVCCEAWKPNANAI  285 (933)
T ss_pred             CCcEEEEecccchh-----c-----cccceeEEEecCCCCCee
Confidence            99999999998321     1     112589999999987754

>KOG2106|consensus

Probab=99.93  E-value=1.1e-23  Score=161.82  Aligned_cols=226  Identities=16%  Similarity=0.246  Sum_probs=174.2

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ...-|.|++|.+++     -+++|..+|.|.||+..+.+..+....|.+.|.+++... +|.+ ++|+.|..|..||-.-
T Consensus       245 ekk~Vl~v~F~eng-----dviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr-~Gtl-lSGgKDRki~~Wd~~y  317 (626)
T KOG2106|consen  245 EKKFVLCVTFLENG-----DVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLR-DGTL-LSGGKDRKIILWDDNY  317 (626)
T ss_pred             cceEEEEEEEcCCC-----CEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEec-CccE-eecCccceEEeccccc
Confidence            34789999999998     699999999999999988888888889999999999998 7655 4599999999998321


Q ss_pred             cc-----------eeeeec--------------------------cccCCCCceEEEEEccCCCEEEEEecCCcEEEEec
Q psy10348         89 DI-----------CIAIFG--------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL  131 (291)
Q Consensus        89 ~~-----------~~~~~~--------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~  131 (291)
                      .+           .++.+.                          ...+|......++.+|+..++++++.|+.+++|+ 
T Consensus       318 ~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~-  396 (626)
T KOG2106|consen  318 RKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN-  396 (626)
T ss_pred             cccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc-
Confidence            00           000000                          0257888899999999999999999999999999 


Q ss_pred             cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccC
Q psy10348        132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTN  210 (291)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  210 (291)
                       ..+++.+..                             -..++.|+.|+ ...++.|...|...+.|..+...      
T Consensus       397 -~~k~~wt~~-----------------------------~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~l------  440 (626)
T KOG2106|consen  397 -DHKLEWTKI-----------------------------IEDPAECADFHPSGVVAVGTATGRWFVLDTETQDL------  440 (626)
T ss_pred             -CCceeEEEE-----------------------------ecCceeEeeccCcceEEEeeccceEEEEeccccee------
Confidence             333322211                             45678899998 33999999999999999988532      


Q ss_pred             CCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        211 ETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       211 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                            +.... ...++.+++++  |+|.+||+|+.|+.|++|.+.....  .....-.+.+  ++|+.+.||+|+++|.
T Consensus       441 ------v~~~~-d~~~ls~v~ys--p~G~~lAvgs~d~~iyiy~Vs~~g~--~y~r~~k~~g--s~ithLDwS~Ds~~~~  507 (626)
T KOG2106|consen  441 ------VTIHT-DNEQLSVVRYS--PDGAFLAVGSHDNHIYIYRVSANGR--KYSRVGKCSG--SPITHLDWSSDSQFLV  507 (626)
T ss_pred             ------EEEEe-cCCceEEEEEc--CCCCEEEEecCCCeEEEEEECCCCc--EEEEeeeecC--ceeEEeeecCCCceEE
Confidence                  22222 36677777776  5599999999999999999987653  2223333333  8999999999999986


Q ss_pred             C
Q psy10348        291 C  291 (291)
Q Consensus       291 s  291 (291)
                      +
T Consensus       508 ~  508 (626)
T KOG2106|consen  508 S  508 (626)
T ss_pred             e
Confidence            4

>KOG0301|consensus

Probab=99.93  E-value=2.8e-24  Score=170.68  Aligned_cols=218  Identities=17%  Similarity=0.269  Sum_probs=177.9

Q ss_pred             ecceeEE-EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          9 IEENFYT-CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         9 ~~~~i~~-~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      |.+-|.+ ++|-+..   +..+++|+.|.+|.+|...+..++..+++|+..|.++.... ++. +++|+.|.++++|-..
T Consensus        56 ~~g~i~~~i~y~e~~---~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~  130 (745)
T KOG0301|consen   56 PKGFIANSICYAESD---KGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIG  130 (745)
T ss_pred             Ccceeeccceecccc---CcceEeecccceEEEEecCCCCchhhhhccccceeeeecCC-cCc-eEecccccceEEecch
Confidence            4444554 6666522   24799999999999999999999999999999999999876 655 9999999999999764


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                        ++...+   .+|...|++++.-|++ .++||+.|++|++|.-  ++.++++                           
T Consensus       131 --~l~~~l---~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf---------------------------  175 (745)
T KOG0301|consen  131 --ELVYSL---QGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTF---------------------------  175 (745)
T ss_pred             --hhhccc---CCcchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhh---------------------------
Confidence              455555   8999999999999988 8999999999999985  5555554                           


Q ss_pred             ccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        168 RDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       168 ~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                       .+|.+.|+.+++- +..|++++.||.|++|++ ++            ..+.++.+|...++++....+  +..++++++
T Consensus       176 -~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~g------------e~l~~~~ghtn~vYsis~~~~--~~~Ivs~gE  239 (745)
T KOG0301|consen  176 -SGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DG------------EVLLEMHGHTNFVYSISMALS--DGLIVSTGE  239 (745)
T ss_pred             -ccchhheeeeEEecCCCeEeecCCceEEEEec-cC------------ceeeeeeccceEEEEEEecCC--CCeEEEecC
Confidence             4699999999998 559999999999999999 44            348899999999999886655  899999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      |+++++|+...  +    ...+.+++  ..|+++.+-++|..++
T Consensus       240 DrtlriW~~~e--~----~q~I~lPt--tsiWsa~~L~NgDIvv  275 (745)
T KOG0301|consen  240 DRTLRIWKKDE--C----VQVITLPT--TSIWSAKVLLNGDIVV  275 (745)
T ss_pred             CceEEEeecCc--e----EEEEecCc--cceEEEEEeeCCCEEE
Confidence            99999999872  2    24444433  3677887777777654

>KOG0303|consensus

Probab=99.93  E-value=5.8e-24  Score=158.63  Aligned_cols=206  Identities=18%  Similarity=0.304  Sum_probs=162.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .|..+|..++|+|...   ..+|+|++|.+|.||.+..+       +++..+.+|...|-.++|+|.-.+.|++++.|.+
T Consensus        79 GHt~~vLDi~w~PfnD---~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   79 GHTAPVLDIDWCPFND---CVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccccccccccCccCC---ceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            5889999999999876   79999999999999998654       4567788999999999999988899999999999


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      |.+|++.+|+.+..+    .|.+.|+++.|+.+|.+|++++.|+.|||||.++++.+..-.                   
T Consensus       156 v~iWnv~tgeali~l----~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~-------------------  212 (472)
T KOG0303|consen  156 VSIWNVGTGEALITL----DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGV-------------------  212 (472)
T ss_pred             EEEEeccCCceeeec----CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecc-------------------
Confidence            999999999998887    499999999999999999999999999999999999765432                   


Q ss_pred             cCcccccccccCcc-eeEEEEc--CCEEEEec---CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        161 HFPQFSTRDIHRNY-VDCVRWL--GDFVLSKS---CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       161 ~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                               +|.+. -..+.|-  ++++-+|-   .+..+-+||....+..         -.+.++....+   ++---+
T Consensus       213 ---------~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP---------~~~~elDtSnG---vl~PFy  271 (472)
T KOG0303|consen  213 ---------AHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEP---------IALQELDTSNG---VLLPFY  271 (472)
T ss_pred             ---------cccCCCcceeEEeccCceeeeccccccccceeccCcccccCc---------ceeEEeccCCc---eEEeee
Confidence                     13321 2233343  55444443   3789999998876553         22344443333   222235


Q ss_pred             cCCCcEEEEEc-CCCcEEEEEcCCCCC
Q psy10348        235 DYWQKILAVGN-QSGRTYVWDLDVQDP  260 (291)
Q Consensus       235 ~~~~~~l~~~~-~dg~i~vwd~~~~~~  260 (291)
                      ++|..+++.++ .|+.||.|++.+..+
T Consensus       272 D~dt~ivYl~GKGD~~IRYyEit~d~P  298 (472)
T KOG0303|consen  272 DPDTSIVYLCGKGDSSIRYFEITNEPP  298 (472)
T ss_pred             cCCCCEEEEEecCCcceEEEEecCCCc
Confidence            67777776655 899999999998764

>KOG0301|consensus

Probab=99.93  E-value=2.3e-24  Score=171.19  Aligned_cols=221  Identities=16%  Similarity=0.220  Sum_probs=182.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee--EEEeeeccceeE-EEEecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINE-LKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .|...|..++..+..     .+++++.||++++|+-..++.+  ..+++|.+-|.. +++-+.++..+++|+.|+.|.+|
T Consensus        12 gH~~DVr~v~~~~~~-----~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~   86 (745)
T KOG0301|consen   12 GHKSDVRAVAVTDGV-----CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVF   86 (745)
T ss_pred             cCccchheeEecCCe-----EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEE
Confidence            467778888877665     8999999999999998655544  356778887777 88887566679999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      .+....++..+   .+|...|+++....++. +++|+.|.++++|......  ..                         
T Consensus        87 ~~~~~~P~~~L---kgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l~--~~-------------------------  135 (745)
T KOG0301|consen   87 KLSQAEPLYTL---KGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGELV--YS-------------------------  135 (745)
T ss_pred             ecCCCCchhhh---hccccceeeeecCCcCc-eEecccccceEEecchhhh--cc-------------------------
Confidence            99999999888   89999999999887776 9999999999999865433  22                         


Q ss_pred             cccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                         ..+|...|.++..- .+.++||+.|.+|++|.-.+.              ++++.+|...|..+++-.   +.-+++
T Consensus       136 ---l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~~~~--------------l~tf~gHtD~VRgL~vl~---~~~flS  195 (745)
T KOG0301|consen  136 ---LQGHTASVWAVASLPENTYVTGSADKTIKLWKGGTL--------------LKTFSGHTDCVRGLAVLD---DSHFLS  195 (745)
T ss_pred             ---cCCcchheeeeeecCCCcEEeccCcceeeeccCCch--------------hhhhccchhheeeeEEec---CCCeEe
Confidence               35699999999887 669999999999999986433              899999999999887753   567889


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.||.|++|++...       ..+++.+|+.-|.+++..+++..+++
T Consensus       196 csNDg~Ir~w~~~ge-------~l~~~~ghtn~vYsis~~~~~~~Ivs  236 (745)
T KOG0301|consen  196 CSNDGSIRLWDLDGE-------VLLEMHGHTNFVYSISMALSDGLIVS  236 (745)
T ss_pred             ecCCceEEEEeccCc-------eeeeeeccceEEEEEEecCCCCeEEE
Confidence            999999999999543       56666689999999997777666653

>KOG0321|consensus

Probab=99.93  E-value=4.2e-24  Score=168.24  Aligned_cols=268  Identities=19%  Similarity=0.194  Sum_probs=173.9

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc------eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA------CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .++.|++..+ ...+||.+.+||.|.++|.....      .+.....|...|..+.|-| ....|++++.|.++++||++
T Consensus        53 f~~sFs~~~n-~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk  130 (720)
T KOG0321|consen   53 FADSFSAAPN-KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVK  130 (720)
T ss_pred             ccccccCCCC-ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeec
Confidence            3466766532 23689999999999999986432      2355668999999999999 88999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +.+.+..- .+.+|...|.+++|.|... .|++|+.||.|.|||++.............+.......+ ...........
T Consensus       131 ~s~l~G~~-~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~p-tpskp~~kr~~  208 (720)
T KOG0321|consen  131 TSRLVGGR-LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAP-TPSKPLKKRIR  208 (720)
T ss_pred             cceeecce-eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCC-CCCchhhcccc
Confidence            88877651 1279999999999999765 788999999999999987652221111111111111101 11111122222


Q ss_pred             cccccCc----ceeEEEEc-CCEEEEecC-CCeEEEecCCCCCccccccCCCceeeeeeecCC-cccEEEEEEEecCCCc
Q psy10348        167 TRDIHRN----YVDCVRWL-GDFVLSKSC-ENCIICWKPGRLEDKELRTNETNVTIINRLNFK-DCEIWFIRFSMDYWQK  239 (291)
Q Consensus       167 ~~~~~~~----~v~~~~~~-~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~  239 (291)
                      ...++..    .|+.+.|- ...|++++. |+.|+|||++..........    .....+..+ ....-.+.+..|..|.
T Consensus       209 k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep----~~~~~~~t~skrs~G~~nL~lDssGt  284 (720)
T KOG0321|consen  209 KWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEP----RGSDKYPTHSKRSVGQVNLILDSSGT  284 (720)
T ss_pred             ccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCC----CcccCccCcccceeeeEEEEecCCCC
Confidence            3333433    35566665 678888888 99999999988754311110    111222222 2234466777777799


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++.+.|+.|++|++.+...-  ....+.+......-..-..+||+.+|++
T Consensus       285 ~L~AsCtD~sIy~ynm~s~s~s--P~~~~sg~~~~sf~vks~lSpd~~~l~S  334 (720)
T KOG0321|consen  285 YLFASCTDNSIYFYNMRSLSIS--PVAEFSGKLNSSFYVKSELSPDDCSLLS  334 (720)
T ss_pred             eEEEEecCCcEEEEeccccCcC--chhhccCcccceeeeeeecCCCCceEec
Confidence            9999888999999999876431  1122221111112223356888888874

>KOG4378|consensus

Probab=99.93  E-value=1.5e-24  Score=166.38  Aligned_cols=210  Identities=12%  Similarity=0.160  Sum_probs=169.5

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      .++++|+..+.|+|||++...+.+.+++|+..|+++.++. ...+||+++..|.|.|..+.++.....|.  .+....|+
T Consensus        92 ~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~-~DeyiAsvs~gGdiiih~~~t~~~tt~f~--~~sgqsvR  168 (673)
T KOG4378|consen   92 LYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNN-TDEYIASVSDGGDIIIHGTKTKQKTTTFT--IDSGQSVR  168 (673)
T ss_pred             eeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecC-CcceeEEeccCCcEEEEecccCcccccee--cCCCCeEE
Confidence            5999999999999999997778888999999999999998 67999999999999999999988877773  23355677


Q ss_pred             EEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---C
Q psy10348        107 SADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---G  182 (291)
Q Consensus       107 ~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~  182 (291)
                      -+.|+|..+ +|.+++.+|.|.+||+........+                           ...|.++...++|+   .
T Consensus       169 ll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~---------------------------~~~HsAP~~gicfspsne  221 (673)
T KOG4378|consen  169 LLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA---------------------------SEAHSAPCRGICFSPSNE  221 (673)
T ss_pred             EeecccccceeeEeeccCCeEEEEeccCCCcccch---------------------------hhhccCCcCcceecCCcc
Confidence            999999876 5677899999999999887754333                           24599999999998   4


Q ss_pred             CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        183 DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      .+|++.+.|..|.+||.+....            ...+.. ..+...  +++.++|.+|+.|+..|.|..||++..+.  
T Consensus       222 ~l~vsVG~Dkki~~yD~~s~~s------------~~~l~y-~~Plst--vaf~~~G~~L~aG~s~G~~i~YD~R~~k~--  284 (673)
T KOG4378|consen  222 ALLVSVGYDKKINIYDIRSQAS------------TDRLTY-SHPLST--VAFSECGTYLCAGNSKGELIAYDMRSTKA--  284 (673)
T ss_pred             ceEEEecccceEEEeecccccc------------cceeee-cCCcce--eeecCCceEEEeecCCceEEEEecccCCC--
Confidence            5899999999999999987644            222222 223334  44557799999999999999999998763  


Q ss_pred             ceeEEEeccccccceeeeEEccCC
Q psy10348        263 IKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                       ...++.  .|...|++++|-|.-
T Consensus       285 -Pv~v~s--ah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  285 -PVAVRS--AHDASVTRVAFQPSP  305 (673)
T ss_pred             -CceEee--ecccceeEEEeeecc
Confidence             223333  677889999998764

>KOG1036|consensus

Probab=99.92  E-value=1.5e-23  Score=151.64  Aligned_cols=215  Identities=13%  Similarity=0.228  Sum_probs=158.0

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ..+.|+.++.+|+|.++.     .+++|+.||.|+++|+.++... .+..|..+|.++.+++ ....+++|+.|++|++|
T Consensus        49 ~~~~~~~plL~c~F~d~~-----~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~w  121 (323)
T KOG1036|consen   49 LKFKHGAPLLDCAFADES-----TIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFW  121 (323)
T ss_pred             hheecCCceeeeeccCCc-----eEEEeccCceEEEEEecCCcce-eeccCCCceEEEEeec-cCCeEEEcccCccEEEE
Confidence            467799999999999865     8999999999999999987754 4567999999999999 77899999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc--------cccccCCCCcccccc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA--------ESYTFNPARSTRPFD  156 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~  156 (291)
                      |.+.......+    .....|.++..+  ++.|+.|+.|..+.+||+++........        .++...|....-...
T Consensus       122 D~R~~~~~~~~----d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~s  195 (323)
T KOG1036|consen  122 DPRNKVVVGTF----DQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVS  195 (323)
T ss_pred             ecccccccccc----ccCceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEE
Confidence            99875555554    344588888764  7899999999999999999876544222        133444432222221


Q ss_pred             Ccccc------------CcccccccccC---------cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCc
Q psy10348        157 TQKEH------------FPQFSTRDIHR---------NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETN  213 (291)
Q Consensus       157 ~~~~~------------~~~~~~~~~~~---------~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  213 (291)
                      +..+.            ...-..++.|.         -+|++++|+  .+.|+||+.||.|.+||+.+.+.         
T Consensus       196 SieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKr---------  266 (323)
T KOG1036|consen  196 SIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKR---------  266 (323)
T ss_pred             eecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhh---------
Confidence            11111            01111222332         368999998  56899999999999999988754         


Q ss_pred             eeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        214 VTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       214 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                         +..+......|..++|+  .+|..||+++.
T Consensus       267 ---l~q~~~~~~SI~slsfs--~dG~~LAia~s  294 (323)
T KOG1036|consen  267 ---LKQLAKYETSISSLSFS--MDGSLLAIASS  294 (323)
T ss_pred             ---hhhccCCCCceEEEEec--cCCCeEEEEec
Confidence               56666555556666665  55999999974

>KOG0646|consensus

Probab=99.92  E-value=2.2e-23  Score=158.44  Aligned_cols=226  Identities=16%  Similarity=0.204  Sum_probs=170.2

Q ss_pred             EEEEec-CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         28 LLAVAG-SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        28 ~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      +++++. ....+.+|.+..........--.++|.+++-+| +|.+|+.|+..|.+++|.+.+|..+..+   .+|=..|+
T Consensus        52 yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~---~aHYQ~IT  127 (476)
T KOG0646|consen   52 YLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVL---SAHYQSIT  127 (476)
T ss_pred             heeeecccCccccccccCchhhhhhhcccccceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHH---Hhhcccee
Confidence            444443 445788998876554443333568899999999 9999999989999999999999999988   79999999


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-C---
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-G---  182 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~---  182 (291)
                      |+.|+-||.+|++|+.||.|.+|.+...-..         .++.          ...++..+..|.-+|+.+... |   
T Consensus       128 cL~fs~dgs~iiTgskDg~V~vW~l~~lv~a---------~~~~----------~~~p~~~f~~HtlsITDl~ig~Gg~~  188 (476)
T KOG0646|consen  128 CLKFSDDGSHIITGSKDGAVLVWLLTDLVSA---------DNDH----------SVKPLHIFSDHTLSITDLQIGSGGTN  188 (476)
T ss_pred             EEEEeCCCcEEEecCCCccEEEEEEEeeccc---------ccCC----------CccceeeeccCcceeEEEEecCCCcc
Confidence            9999999999999999999999998543210         0111          122344455699999999887 3   


Q ss_pred             CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        183 DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      .++++++.|.++++||+..+..            +.++.... .  ..++..||-++.+++|+.+|.|.+.++.......
T Consensus       189 ~rl~TaS~D~t~k~wdlS~g~L------------Llti~fp~-s--i~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~  253 (476)
T KOG0646|consen  189 ARLYTASEDRTIKLWDLSLGVL------------LLTITFPS-S--IKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQS  253 (476)
T ss_pred             ceEEEecCCceEEEEEecccee------------eEEEecCC-c--ceeEEEcccccEEEecCCcceEEeeehhcCCccc
Confidence            4999999999999999998844            44444332 2  3455666779999999999999999987654111


Q ss_pred             c----------eeEEEecccccc--ceeeeEEccCCceeeC
Q psy10348        263 I----------KFQILSHPRCMS--AVRQTTLSKNGNVLLC  291 (291)
Q Consensus       263 ~----------~~~~~~~~~~~~--~v~~~~~s~~g~~l~s  291 (291)
                      .          ........+|.+  +|+|++.+-||..|++
T Consensus       254 ~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlS  294 (476)
T KOG0646|consen  254 AGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLS  294 (476)
T ss_pred             ccccccccccccceeeeeccccCCcceeEEEEecCccEEEe
Confidence            1          111222336766  9999999999999975

>KOG0302|consensus

Probab=99.92  E-value=4e-24  Score=158.57  Aligned_cols=167  Identities=21%  Similarity=0.371  Sum_probs=137.2

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee---EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV---RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      |...=++++|||-..   ..|++|..-+.|++|...+|.-.   ..+.+|+..|..|+|+|.....|++|+.||+|+|||
T Consensus       210 hk~EGy~LdWSp~~~---g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWD  286 (440)
T KOG0302|consen  210 HKGEGYGLDWSPIKT---GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWD  286 (440)
T ss_pred             cCccceeeecccccc---cccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEE
Confidence            566778999999543   47999988899999999887532   345679999999999998889999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ++.+.....+.. +.|.+.|+.+.|+..-.+|++|+.||+++|||++..+.-                         ..+
T Consensus       287 iRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~-------------------------~pV  340 (440)
T KOG0302|consen  287 IRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG-------------------------QPV  340 (440)
T ss_pred             ecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC-------------------------Ccc
Confidence            998843333222 689999999999998889999999999999999976532                         123


Q ss_pred             ccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCc
Q psy10348        166 STRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      ..++.|..+|++|.|+   ...|++++.|..|.+||+.....
T Consensus       341 A~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D  382 (440)
T KOG0302|consen  341 ATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD  382 (440)
T ss_pred             eeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence            3345599999999999   55899999999999999975543

>KOG1446|consensus

Probab=99.92  E-value=8.6e-23  Score=148.23  Aligned_cols=194  Identities=21%  Similarity=0.230  Sum_probs=156.2

Q ss_pred             ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CC
Q psy10348         47 ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DH  124 (291)
Q Consensus        47 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~  124 (291)
                      ++.+.++.....|+++.|++ +|.++++++.|.+++|||..+++.++.+   ..++-.+..++|......++.++.  |.
T Consensus         5 ~~ak~f~~~~~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~~~~ti---~skkyG~~~~~Fth~~~~~i~sStk~d~   80 (311)
T KOG1446|consen    5 RPAKVFRETNGKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGKQVKTI---NSKKYGVDLACFTHHSNTVIHSSTKEDD   80 (311)
T ss_pred             ccccccccCCCceeEEEecC-CCCEEEEecCCCeEEEEEcCCCceeeEe---ecccccccEEEEecCCceEEEccCCCCC
Confidence            44455666678999999999 9999999999999999999999999998   677788999999888777777776  89


Q ss_pred             cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCC
Q psy10348        125 SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       125 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      +||..++.+.+.++.+.                            +|...|..++.+  ++.+++++.|++|++||++..
T Consensus        81 tIryLsl~dNkylRYF~----------------------------GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~  132 (311)
T KOG1446|consen   81 TIRYLSLHDNKYLRYFP----------------------------GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVK  132 (311)
T ss_pred             ceEEEEeecCceEEEcC----------------------------CCCceEEEEEecCCCCeEEecccCCeEEeeEecCC
Confidence            99999999999776664                            699999999999  789999999999999999977


Q ss_pred             CccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-ccccceeeeE
Q psy10348        203 EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-RCMSAVRQTT  281 (291)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~  281 (291)
                      ++            ...+.....+    ..+++|+|.++|++...+.|++||++.-...  ....+... +-....+.+.
T Consensus       133 ~c------------qg~l~~~~~p----i~AfDp~GLifA~~~~~~~IkLyD~Rs~dkg--PF~tf~i~~~~~~ew~~l~  194 (311)
T KOG1446|consen  133 KC------------QGLLNLSGRP----IAAFDPEGLIFALANGSELIKLYDLRSFDKG--PFTTFSITDNDEAEWTDLE  194 (311)
T ss_pred             CC------------ceEEecCCCc----ceeECCCCcEEEEecCCCeEEEEEecccCCC--CceeEccCCCCccceeeeE
Confidence            55            2222222222    2467788999999998889999999986432  22333322 3346789999


Q ss_pred             EccCCceee
Q psy10348        282 LSKNGNVLL  290 (291)
Q Consensus       282 ~s~~g~~l~  290 (291)
                      |||||++|+
T Consensus       195 FS~dGK~iL  203 (311)
T KOG1446|consen  195 FSPDGKSIL  203 (311)
T ss_pred             EcCCCCEEE
Confidence            999999885

>KOG0307|consensus

Probab=99.92  E-value=1.4e-24  Score=181.26  Aligned_cols=239  Identities=16%  Similarity=0.196  Sum_probs=182.7

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---c---ceeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---H---ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      ++....+.+.++|++.+.....++|.|.+||.|.+||...   +   ..+.+...|++.|..+.|++..+++||+|+.||
T Consensus        60 s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~g  139 (1049)
T KOG0307|consen   60 SLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDG  139 (1049)
T ss_pred             cccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCC
Confidence            4455788899999998863334799999999999999864   2   356677889999999999997777999999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      .|.|||+..-+...... -....+.|.+++|+.. .+.|++++.+|.+.|||++..+.+-.+...               
T Consensus       140 eI~iWDlnn~~tP~~~~-~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~---------------  203 (1049)
T KOG0307|consen  140 EILIWDLNKPETPFTPG-SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDT---------------  203 (1049)
T ss_pred             cEEEeccCCcCCCCCCC-CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccC---------------
Confidence            99999998754433331 1335678999999875 457888999999999999988765443310               


Q ss_pred             cccCcccccccccCcceeEEEEcC---CEEEEecCCC---eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWLG---DFVLSKSCEN---CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                                 .....+..++|+.   ..+++++.|.   .|.+||+|....           +++.+++|...|..+.|
T Consensus       204 -----------~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ass-----------P~k~~~~H~~GilslsW  261 (1049)
T KOG0307|consen  204 -----------PGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASS-----------PLKILEGHQRGILSLSW  261 (1049)
T ss_pred             -----------CCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCC-----------chhhhcccccceeeecc
Confidence                       0123477899983   2555555543   799999987653           38888999999999888


Q ss_pred             EecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        233 SMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       233 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      +.. |..+|++++.|+.|.+|+.++++.+      -+.+.....+..+.|.|...-+
T Consensus       262 c~~-D~~lllSsgkD~~ii~wN~~tgEvl------~~~p~~~nW~fdv~w~pr~P~~  311 (1049)
T KOG0307|consen  262 CPQ-DPRLLLSSGKDNRIICWNPNTGEVL------GELPAQGNWCFDVQWCPRNPSV  311 (1049)
T ss_pred             CCC-CchhhhcccCCCCeeEecCCCceEe------eecCCCCcceeeeeecCCCcch
Confidence            864 4589999999999999999998632      2233345688899999976633

>KOG2048|consensus

Probab=99.92  E-value=1.6e-22  Score=160.37  Aligned_cols=238  Identities=15%  Similarity=0.135  Sum_probs=186.9

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      +....+..|.+++|++.+     .|++.+.+|.|.-||+.+++....+....++|.+++.+| .+..++.|+.||.+..+
T Consensus        64 i~g~~drsIE~L~W~e~~-----RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p-~~~~l~IgcddGvl~~~  137 (691)
T KOG2048|consen   64 IHGPEDRSIESLAWAEGG-----RLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINP-ENTILAIGCDDGVLYDF  137 (691)
T ss_pred             EecCCCCceeeEEEccCC-----eEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCC-ccceEEeecCCceEEEE
Confidence            444567899999999665     899999999999999999999999998899999999999 88999999999977777


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      +...+..... ..+...+++|.++.|+|++..+++|+.||.|++||...+..+.......                    
T Consensus       138 s~~p~~I~~~-r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~--------------------  196 (691)
T KOG2048|consen  138 SIGPDKITYK-RSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQL--------------------  196 (691)
T ss_pred             ecCCceEEEE-eecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecc--------------------
Confidence            7776544332 2235667999999999999999999999999999999887654211000                    


Q ss_pred             cccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      -...+....-|.++.|- .+.|++|..-|+|.+||...+..            ++.+..|...|.+++.+  +++.++.+
T Consensus       197 d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTL------------iqS~~~h~adVl~Lav~--~~~d~vfs  262 (691)
T KOG2048|consen  197 DRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTL------------IQSHSCHDADVLALAVA--DNEDRVFS  262 (691)
T ss_pred             cccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcch------------hhhhhhhhcceeEEEEc--CCCCeEEE
Confidence            00001133446677776 78999999999999999988844            78888888888877666  55999999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ++.|+.|..|...+.+.  +.........|...|++++..++
T Consensus       263 aGvd~~ii~~~~~~~~~--~wv~~~~r~~h~hdvrs~av~~~  302 (691)
T KOG2048|consen  263 AGVDPKIIQYSLTTNKS--EWVINSRRDLHAHDVRSMAVIEN  302 (691)
T ss_pred             ccCCCceEEEEecCCcc--ceeeeccccCCcccceeeeeecc
Confidence            99999999999888754  12233334467778888888776

>KOG0647|consensus

Probab=99.92  E-value=1.4e-23  Score=151.41  Aligned_cols=182  Identities=20%  Similarity=0.355  Sum_probs=139.5

Q ss_pred             eeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      ..++.|.+|+|+|....+++.++.||+|++|+++. |..+..  ....|.++|.+++|+.+|..+++|+.|+.+++||+.
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~k--a~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~  102 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPK--AQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA  102 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccch--hhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence            45788999999997777888999999999999986 344332  236899999999999999999999999999999999


Q ss_pred             CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcC----CEEEEecCCCeEEEecCCCCCccccc
Q psy10348        133 KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG----DFVLSKSCENCIICWKPGRLEDKELR  208 (291)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (291)
                      +++....                             ..|.++|.++.|-+    ..|++|+.|.+|++||++...+    
T Consensus       103 S~Q~~~v-----------------------------~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~p----  149 (347)
T KOG0647|consen  103 SGQVSQV-----------------------------AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNP----  149 (347)
T ss_pred             CCCeeee-----------------------------eecccceeEEEEecCCCcceeEecccccceeecccCCCCe----
Confidence            9975432                             34999999999972    3789999999999999998744    


Q ss_pred             cCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348        209 TNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                              +.++...+. ++++    +--..+++++..+..|.+|+++++....   .... ....-.+++++..+|..
T Consensus       150 --------v~t~~LPeR-vYa~----Dv~~pm~vVata~r~i~vynL~n~~te~---k~~~-SpLk~Q~R~va~f~d~~  211 (347)
T KOG0647|consen  150 --------VATLQLPER-VYAA----DVLYPMAVVATAERHIAVYNLENPPTEF---KRIE-SPLKWQTRCVACFQDKD  211 (347)
T ss_pred             --------eeeeeccce-eeeh----hccCceeEEEecCCcEEEEEcCCCcchh---hhhc-CcccceeeEEEEEecCC
Confidence                    666655543 3333    3336789999999999999998764211   1111 12234677887777654

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.92  E-value=2.3e-22  Score=157.13  Aligned_cols=227  Identities=15%  Similarity=0.104  Sum_probs=156.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~i~vwd~   86 (291)
                      .....+.+++|+|++.   .++++++.++.|++||..+++.+..+..+.. +..++|+| +++.++ ++..++.+++||+
T Consensus        28 ~~~~~~~~l~~~~dg~---~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~-~g~~l~~~~~~~~~l~~~d~  102 (300)
T TIGR03866        28 PVGQRPRGITLSKDGK---LLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHP-NGKILYIANEDDNLVTVIDI  102 (300)
T ss_pred             ECCCCCCceEECCCCC---EEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECC-CCCEEEEEcCCCCeEEEEEC
Confidence            3345577899999884   2346777899999999999988777765444 56789999 667665 4566899999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-cEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .+++.+..+    .+...+.+++|+|++.+++++..++ .+.+||.++++......                        
T Consensus       103 ~~~~~~~~~----~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~------------------------  154 (300)
T TIGR03866       103 ETRKVLAEI----PVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL------------------------  154 (300)
T ss_pred             CCCeEEeEe----eCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE------------------------
Confidence            988777666    2334568899999999999888765 46778987765432211                        


Q ss_pred             ccccccCcceeEEEEc--CCEEE-EecCCCeEEEecCCCCCccccccCCCceeeeeeecCC-----cccEEEEEEEecCC
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVL-SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK-----DCEIWFIRFSMDYW  237 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~  237 (291)
                           .......+.|+  +++++ ++..++.|.+||+.+.+.            +..+..+     ........+.++|+
T Consensus       155 -----~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~------------~~~~~~~~~~~~~~~~~~~~i~~s~d  217 (300)
T TIGR03866       155 -----VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV------------IKKITFEIPGVHPEAVQPVGIKLTKD  217 (300)
T ss_pred             -----cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee------------eeeeeecccccccccCCccceEECCC
Confidence                 11224567776  66664 555699999999988754            2222111     11222334566788


Q ss_pred             CcEEEEE-cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        238 QKILAVG-NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       238 ~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +++++++ +.++.+.+||+.+++..    ..+.   +...+.+++|+|+|++|++
T Consensus       218 g~~~~~~~~~~~~i~v~d~~~~~~~----~~~~---~~~~~~~~~~~~~g~~l~~  265 (300)
T TIGR03866       218 GKTAFVALGPANRVAVVDAKTYEVL----DYLL---VGQRVWQLAFTPDEKYLLT  265 (300)
T ss_pred             CCEEEEEcCCCCeEEEEECCCCcEE----EEEE---eCCCcceEEECCCCCEEEE
Confidence            9986554 45678999999876432    2221   2347889999999998863

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1009|consensus

Probab=99.92  E-value=1.7e-23  Score=156.49  Aligned_cols=134  Identities=24%  Similarity=0.340  Sum_probs=109.7

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---------eeEEEeeeccceeEEEEecCCCcEEEE
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---------CVRHFYGHGHAINELKFHPQDFNLLLS   74 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~s   74 (291)
                      +++....++++.+.|.++..   ..+|+|+.|..|++|.++.++         .+..+..|...|+++.|+| +|++||+
T Consensus         7 ei~wH~~~pv~s~dfq~n~~---~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p-~gelLAS   82 (434)
T KOG1009|consen    7 EISWHDHEPVYSVDFQKNSL---NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSP-DGELLAS   82 (434)
T ss_pred             EEEecCCCceEEEEeccCcc---cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcC-CcCeeee
Confidence            34445678999999998874   499999999999999876432         3445678999999999999 9999999


Q ss_pred             eecCCeEEEEECC--------C-----cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         75 VSKDHTLRLWNIK--------T-----DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        75 ~~~dg~i~vwd~~--------~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      |+.+|.|.+|-..        +     .+.-.....+.+|...|..++|+|++.++++++.|..+++||+..+.....+.
T Consensus        83 g~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~  162 (434)
T KOG1009|consen   83 GGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILD  162 (434)
T ss_pred             cCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecc
Confidence            9999999999765        2     11111222347899999999999999999999999999999999999776654

>KOG4283|consensus

Probab=99.92  E-value=1.7e-22  Score=145.60  Aligned_cols=180  Identities=14%  Similarity=0.250  Sum_probs=145.7

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCC--CcEEEEeecCCeEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTLR   82 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i~   82 (291)
                      .+-.|.-.|.++.|-|-.+   ..+.+++-|.+++|||..+.+....|+ .++.|.+-+++|-.  ..++|+|..|-.|+
T Consensus        96 h~~~Hky~iss~~WyP~Dt---GmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~Vr  171 (397)
T KOG4283|consen   96 HENGHKYAISSAIWYPIDT---GMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVR  171 (397)
T ss_pred             CCccceeeeeeeEEeeecC---ceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEE
Confidence            3445778899999999876   699999999999999999988877776 56788888888832  35788888899999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCccccccCccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      +.|+.+|.....+   .+|.+.|.++.|+|... .|++|+.||.|++||++.. .+...+..+-              ..
T Consensus       172 LCDi~SGs~sH~L---sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn--------------~k  234 (397)
T KOG4283|consen  172 LCDIASGSFSHTL---SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHN--------------TK  234 (397)
T ss_pred             EEeccCCcceeee---ccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeeccc--------------Cc
Confidence            9999999999998   89999999999999877 5688999999999999875 2322222111              01


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      ..|...+..+|.+.+..++|.  +.++++++.|..+++|+..+++..
T Consensus       235 ~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~nt  281 (397)
T KOG4283|consen  235 RPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNT  281 (397)
T ss_pred             cCccccccccccceeeeeeecccchhhhhccCccceEEeecccCccc
Confidence            123334456799999999998  889999999999999999887653

>KOG2048|consensus

Probab=99.92  E-value=4.4e-22  Score=157.94  Aligned_cols=235  Identities=17%  Similarity=0.200  Sum_probs=180.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEeee-ccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFYGH-GHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ....+|.++||+.+.+    .||.+-.+|.|.+|++..+= +...+.++ .+.|.+++|.+ + ..|++.+.+|.|.-||
T Consensus        23 ~~Ps~I~slA~s~kS~----~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~-~RLFS~g~sg~i~EwD   96 (691)
T KOG2048|consen   23 YKPSEIVSLAYSHKSN----QLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-G-GRLFSSGLSGSITEWD   96 (691)
T ss_pred             eeccceEEEEEeccCC----ceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-C-CeEEeecCCceEEEEe
Confidence            3468899999999884    89999999999999998653 33445554 46899999995 4 5778888899999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.+++....+   ....+.|++++.+|.+..++.|+.||.+..++...++.....                         
T Consensus        97 l~~lk~~~~~---d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r-------------------------  148 (691)
T KOG2048|consen   97 LHTLKQKYNI---DSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKR-------------------------  148 (691)
T ss_pred             cccCceeEEe---cCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEe-------------------------
Confidence            9999998888   688899999999999999999999997777777666543221                         


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~  242 (291)
                       .+.-..++|.++.|+  +..+++|+.||.|++||...+.......     ..+..+.. ...-+|.+.+- .  ...|+
T Consensus       149 -~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~-----~~~d~l~k~~~~iVWSv~~L-r--d~tI~  219 (691)
T KOG2048|consen  149 -SLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIIT-----MQLDRLSKREPTIVWSVLFL-R--DSTIA  219 (691)
T ss_pred             -ecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEee-----ecccccccCCceEEEEEEEe-e--cCcEE
Confidence             112246889999999  5579999999999999998886532100     00112222 34456666654 3  57899


Q ss_pred             EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        243 VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|..-|+|.+||-..+..+      ..+..|...|.+++.++++.++++
T Consensus       220 sgDS~G~V~FWd~~~gTLi------qS~~~h~adVl~Lav~~~~d~vfs  262 (691)
T KOG2048|consen  220 SGDSAGTVTFWDSIFGTLI------QSHSCHDADVLALAVADNEDRVFS  262 (691)
T ss_pred             EecCCceEEEEcccCcchh------hhhhhhhcceeEEEEcCCCCeEEE
Confidence            9999999999999998532      234467789999999999887753

>KOG1408|consensus

Probab=99.91  E-value=1.3e-23  Score=167.97  Aligned_cols=235  Identities=17%  Similarity=0.162  Sum_probs=181.8

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC--CCcEEEEeecCCeEEEEEC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ--DFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..-.+++++.||++    ++||+|..-|.++||++...+.+..+.+|+..|.|+.|+..  ..++||+++.|.-|.|||+
T Consensus       458 ~r~G~R~~~vSp~g----qhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv  533 (1080)
T KOG1408|consen  458 SRFGFRALAVSPDG----QHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDV  533 (1080)
T ss_pred             cccceEEEEECCCc----ceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEec
Confidence            35678999999999    59999999999999999999999999999999999999852  3468999999999999998


Q ss_pred             CCc-ceeeeeccccCCCCceEEEEEccCC--CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         87 KTD-ICIAIFGGVEGHRDEVLSADFDLLG--TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        87 ~~~-~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ... ..+..+   .+|...|+++.|.-+|  ..+++++.|+.|.+=-.+....-..+...                    
T Consensus       534 ~rny~l~qtl---d~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~--------------------  590 (1080)
T KOG1408|consen  534 KRNYDLVQTL---DGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRH--------------------  590 (1080)
T ss_pred             ccccchhhhh---cccccceeEEEEeecCCceEEEeccCchhhheehhccccCceecccc--------------------
Confidence            643 233444   8999999999998887  68999999987764222211101011000                    


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc-EEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE-IWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~  240 (291)
                         +.......+..++..  .+++++++.|..|+||++.+++.            .+.|++.... -..+.+..+|.|.|
T Consensus       591 ---t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq------------~k~FKgs~~~eG~lIKv~lDPSgiY  655 (1080)
T KOG1408|consen  591 ---TQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQ------------VKSFKGSRDHEGDLIKVILDPSGIY  655 (1080)
T ss_pred             ---ccccccceEEEeeeCCCcceEEEEecccceEEEeccccce------------eeeecccccCCCceEEEEECCCccE
Confidence               000123345566665  66999999999999999999865            6666654332 34567778888999


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ||+.+.|.++.++|..+++++.      ...+|...|+.+.|.+|-++|++
T Consensus       656 ~atScsdktl~~~Df~sgEcvA------~m~GHsE~VTG~kF~nDCkHlIS  700 (1080)
T KOG1408|consen  656 LATSCSDKTLCFVDFVSGECVA------QMTGHSEAVTGVKFLNDCKHLIS  700 (1080)
T ss_pred             EEEeecCCceEEEEeccchhhh------hhcCcchheeeeeecccchhhee
Confidence            9999999999999999998653      33488899999999999998864

>KOG1408|consensus

Probab=99.91  E-value=1.5e-22  Score=162.05  Aligned_cols=241  Identities=15%  Similarity=0.182  Sum_probs=169.7

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEEEccCCccee---EEEeeeccceeEEEEecC----------CCcEEEEeecCCeE
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV---RHFYGHGHAINELKFHPQ----------DFNLLLSVSKDHTL   81 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~---~~~~~~~~~v~~~~~~~~----------~~~~l~s~~~dg~i   81 (291)
                      ++.|.+..    ..|.....|..++|||++.-..+   ..+-.|...|+.+.--|-          -...|.|++.|++|
T Consensus       329 A~~Fdet~----~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TI  404 (1080)
T KOG1408|consen  329 ACQFDETT----DKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTI  404 (1080)
T ss_pred             EEEecCCC----ceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcE
Confidence            56677666    48888889999999999864322   334458887887776551          12358999999999


Q ss_pred             EEEECCCcceeeeec----------------------------------cccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         82 RLWNIKTDICIAIFG----------------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~----------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      ++||+..+..-..+.                                  ........+++++.+|+|++|++|..-|.++
T Consensus       405 RlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~Gnlr  484 (1080)
T KOG1408|consen  405 RLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLR  484 (1080)
T ss_pred             EEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceE
Confidence            999987532111100                                  0123356799999999999999999999999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCC
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      |||+...+..-.+                            ++|+..|.|+.|+     .++|++++.|..|++||....
T Consensus       485 Vy~Lq~l~~~~~~----------------------------eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn  536 (1080)
T KOG1408|consen  485 VYDLQELEYTCFM----------------------------EAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN  536 (1080)
T ss_pred             EEEehhhhhhhhe----------------------------ecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence            9999887765444                            4599999999998     458999999999999998654


Q ss_pred             Cccc--cccCCCceeee-------------------------------eeecCCc---ccEEEEEEEecCCCcEEEEEcC
Q psy10348        203 EDKE--LRTNETNVTII-------------------------------NRLNFKD---CEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       203 ~~~~--~~~~~~~~~~~-------------------------------~~~~~~~---~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      -...  +..+...++.+                               ..+..+.   ..-+.-++..+|..+++++++.
T Consensus       537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ  616 (1080)
T KOG1408|consen  537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ  616 (1080)
T ss_pred             cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence            3320  00000000000                               0011110   1112345666777999999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEccCCceeeC
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |..|+|||+.+++..    +.++ ..+|++..--+...|.|.|||+
T Consensus       617 Drnirif~i~sgKq~----k~FKgs~~~eG~lIKv~lDPSgiY~at  658 (1080)
T KOG1408|consen  617 DRNIRIFDIESGKQV----KSFKGSRDHEGDLIKVILDPSGIYLAT  658 (1080)
T ss_pred             ccceEEEecccccee----eeecccccCCCceEEEEECCCccEEEE
Confidence            999999999999753    4444 3477788999999999999985

>KOG2919|consensus

Probab=99.91  E-value=2.3e-22  Score=146.61  Aligned_cols=241  Identities=18%  Similarity=0.289  Sum_probs=181.0

Q ss_pred             eeeeeecceeEEEEeeeccC---CCCCEEEEecCCCeEEEEccCCcceeEEEee--ecc---ceeEEEEecCCCcEEEEe
Q psy10348          4 RYSLLIEENFYTCAWSMDLE---SGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--HGH---AINELKFHPQDFNLLLSV   75 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~---~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~~l~s~   75 (291)
                      .+.....+.|+..+|-+..+   |+..++|+.+.+.-|++||.-+|+....+.+  |.+   ...+++|+| ||.+|+.|
T Consensus        98 ~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~-DGeqlfaG  176 (406)
T KOG2919|consen   98 SYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSP-DGEQLFAG  176 (406)
T ss_pred             eEEeccCCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecC-CCCeEeec
Confidence            45566678899999985432   4446999999999999999999998777653  433   446899999 99999986


Q ss_pred             ecCCeEEEEEC-CCcceeeeecc----ccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCC
Q psy10348         76 SKDHTLRLWNI-KTDICIAIFGG----VEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        76 ~~dg~i~vwd~-~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                      . ...|+++|+ +.|+....+..    -.+..+-|.+++|+|... .++.++....+-||.-..+.++..+         
T Consensus       177 y-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~ll---------  246 (406)
T KOG2919|consen  177 Y-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLL---------  246 (406)
T ss_pred             c-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeee---------
Confidence            5 578999999 55543322211    123467789999999755 8899998888888887777655443         


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCCCCccccccCCCceeeeeeecCCcc-
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC-  225 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-  225 (291)
                                         .+|.+.|+.++|.  |+.|++|.. |..|..||++....+           +..+..|.. 
T Consensus       247 -------------------ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p-----------v~~L~rhv~~  296 (406)
T KOG2919|consen  247 -------------------GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP-----------VYALERHVGD  296 (406)
T ss_pred             -------------------cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch-----------hhhhhhhccC
Confidence                               3599999999998  888888876 889999999987653           555554443 


Q ss_pred             cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .-.-+-|..+|++++|++|+.||.|++||+...-.     .+.....+...++.++++|--.++|
T Consensus       297 TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn-----~~sv~~~~sd~vNgvslnP~mpila  356 (406)
T KOG2919|consen  297 TNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN-----EVSVTGNYSDTVNGVSLNPIMPILA  356 (406)
T ss_pred             ccceEEEecCCCCceeeccCCCccEEEEecCCCCC-----cccccccccccccceecCcccceee
Confidence            33345678889999999999999999999998321     2223335677899999999766655

>KOG1007|consensus

Probab=99.91  E-value=2e-22  Score=144.76  Aligned_cols=239  Identities=15%  Similarity=0.224  Sum_probs=179.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCC-------CeEEEEccCCc---------ceeEEEe-eeccceeEEEEecCCC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSR-------AVIRIFSPAFH---------ACVRHFY-GHGHAINELKFHPQDF   69 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~d-------g~i~vw~~~~~---------~~~~~~~-~~~~~v~~~~~~~~~~   69 (291)
                      +.|.+.|..++-+|...   .+|+++..+       -.+.||.+...         +++..+. .+-+.|.|+.|.| ++
T Consensus        60 ~h~agEvw~las~P~d~---~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~P-ns  135 (370)
T KOG1007|consen   60 FHHAGEVWDLASSPFDQ---RILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEP-NS  135 (370)
T ss_pred             hcCCcceehhhcCCCCC---ceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcC-CC
Confidence            45678999999999876   688887553       34779987532         3344444 4557899999999 88


Q ss_pred             cEEEEeecCCeEEEEECCCcce-eeeec--cccCCCCceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhcccc
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDIC-IAIFG--GVEGHRDEVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~-~~~~~--~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                      ..+++-. |..|.+|++..+.. +..+.  .-.++....++-+|+|  +++.+++.+ |+++..||+++.+....+.   
T Consensus       136 ~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~---  210 (370)
T KOG1007|consen  136 DKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIE---  210 (370)
T ss_pred             CeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchh---
Confidence            8888866 78899999987765 33221  1123566788999998  577777666 8999999999988765554   


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEcCC---EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD---FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                                              ++|...|..+.|+++   +|++++.||.|++||.+..+..           +.++.
T Consensus       211 ------------------------dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p-----------v~el~  255 (370)
T KOG1007|consen  211 ------------------------DAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP-----------VQELP  255 (370)
T ss_pred             ------------------------hhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc-----------ccccC
Confidence                                    568899999999943   8999999999999999987643           89999


Q ss_pred             CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc-----------------cee------EEEecccccccee
Q psy10348        222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS-----------------IKF------QILSHPRCMSAVR  278 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-----------------~~~------~~~~~~~~~~~v~  278 (291)
                      +|...+|+++|.+.. .+++++|+.|..|.+|...+-...+                 ...      ..-....|+..|.
T Consensus       256 ~HsHWvW~VRfn~~h-dqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY  334 (370)
T KOG1007|consen  256 GHSHWVWAVRFNPEH-DQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVY  334 (370)
T ss_pred             CCceEEEEEEecCcc-ceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceE
Confidence            999999999998754 6889999999999999876432100                 000      1112346889999


Q ss_pred             eeEEccCCceee
Q psy10348        279 QTTLSKNGNVLL  290 (291)
Q Consensus       279 ~~~~s~~g~~l~  290 (291)
                      +++||.-..+++
T Consensus       335 ~~aWSsadPWiF  346 (370)
T KOG1007|consen  335 ALAWSSADPWIF  346 (370)
T ss_pred             EEeeccCCCeeE
Confidence            999988666554

>KOG0268|consensus

Probab=99.91  E-value=1.5e-23  Score=154.84  Aligned_cols=178  Identities=15%  Similarity=0.254  Sum_probs=137.7

Q ss_pred             EEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEE
Q psy10348         38 IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKI  117 (291)
Q Consensus        38 i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  117 (291)
                      |.|||.+...+++.+..-.+.|.++.|+|.....|++++.|+.|.+||++++.++..+    --+..-+.++|+|.+-.|
T Consensus       169 i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KV----i~~mRTN~IswnPeafnF  244 (433)
T KOG0268|consen  169 IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKV----ILTMRTNTICWNPEAFNF  244 (433)
T ss_pred             eeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCcccee----eeeccccceecCccccce
Confidence            4455544445566666556788999999988889999999999999999999988876    445667789999988889


Q ss_pred             EEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEE
Q psy10348        118 MSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCII  195 (291)
Q Consensus       118 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~  195 (291)
                      ++|.+|..++.||++..+..                           +....+|.+.|..+.|+  |+-+++|+.|.+|+
T Consensus       245 ~~a~ED~nlY~~DmR~l~~p---------------------------~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIR  297 (433)
T KOG0268|consen  245 VAANEDHNLYTYDMRNLSRP---------------------------LNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIR  297 (433)
T ss_pred             eeccccccceehhhhhhccc---------------------------chhhcccceeEEEeccCCCcchhccccccceEE
Confidence            99999999999999876522                           22234589999999999  89999999999999


Q ss_pred             EecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        196 CWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       196 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      ||..+.+....+         .++-  .-..|.++.++  -|.+|+++||+|+.|++|.....+
T Consensus       298 If~~~~~~SRdi---------Yhtk--RMq~V~~Vk~S--~Dskyi~SGSdd~nvRlWka~Ase  348 (433)
T KOG0268|consen  298 IFPVNHGHSRDI---------YHTK--RMQHVFCVKYS--MDSKYIISGSDDGNVRLWKAKASE  348 (433)
T ss_pred             EeecCCCcchhh---------hhHh--hhheeeEEEEe--ccccEEEecCCCcceeeeecchhh
Confidence            999987754210         1111  11234555555  459999999999999999987654

>KOG1273|consensus

Probab=99.91  E-value=4e-23  Score=150.06  Aligned_cols=215  Identities=14%  Similarity=0.154  Sum_probs=151.3

Q ss_pred             eeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhh
Q psy10348         59 INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD  138 (291)
Q Consensus        59 v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~  138 (291)
                      ..|+.|++ .|.+||+|+.||.|.|||+.+...-+.+   .+|..+|++++|+++|+.|++++.|..|.+||+..+.+++
T Consensus        26 a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~iar~l---saH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~  101 (405)
T KOG1273|consen   26 AECCQFSR-WGDYLAVGCANGRVVIYDFDTFRIARML---SAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLK  101 (405)
T ss_pred             cceEEecc-CcceeeeeccCCcEEEEEccccchhhhh---hccccceeEEEecCCCCEeeeecCCceeEEEeccCCCcee
Confidence            78999999 9999999999999999999998877777   7999999999999999999999999999999999999877


Q ss_pred             hhcc-----ccccCCCCccccccCccccCcccccc------------ccc-CcceeEEEEc--CCEEEEecCCCeEEEec
Q psy10348        139 ACAE-----SYTFNPARSTRPFDTQKEHFPQFSTR------------DIH-RNYVDCVRWL--GDFVLSKSCENCIICWK  198 (291)
Q Consensus       139 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~v~~~~~~--~~~l~~~~~d~~i~iwd  198 (291)
                      .+.-     ...+.|......+...-...+.+-.+            ++. .....+..|+  |+++++|...|.+.++|
T Consensus       102 rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~  181 (405)
T KOG1273|consen  102 RIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYD  181 (405)
T ss_pred             EEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEe
Confidence            6542     34455554433332221111111100            011 1112223455  89999999999999999


Q ss_pred             CCCCCccccccCCCceeeeeeecCCc-ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC---cceeEEEecc--c
Q psy10348        199 PGRLEDKELRTNETNVTIINRLNFKD-CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS---SIKFQILSHP--R  272 (291)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~--~  272 (291)
                      ..+.+.            +..+.... ..|..+.++..  |++|+.-+.|..||.|++..-...   .......+.+  -
T Consensus       182 a~t~e~------------vas~rits~~~IK~I~~s~~--g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvV  247 (405)
T KOG1273|consen  182 AETLEC------------VASFRITSVQAIKQIIVSRK--GRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVV  247 (405)
T ss_pred             cchhee------------eeeeeechheeeeEEEEecc--CcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHH
Confidence            998854            56655544 55666666654  999999999999999998732111   0000000000  1


Q ss_pred             cccceeeeEEccCCceeeC
Q psy10348        273 CMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       273 ~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..-+-.++.||.||.|+++
T Consensus       248 Nk~~Wk~ccfs~dgeYv~a  266 (405)
T KOG1273|consen  248 NKLQWKKCCFSGDGEYVCA  266 (405)
T ss_pred             hhhhhhheeecCCccEEEe
Confidence            1123457899999999874

>KOG0290|consensus

Probab=99.90  E-value=2.2e-22  Score=144.69  Aligned_cols=236  Identities=17%  Similarity=0.203  Sum_probs=175.1

Q ss_pred             eeecceeEEEEeeeccCCC-CCEEEEecCCCeEEEEccCCc--ce--eEEE-----eeeccceeEEEEecCCCcEEEEee
Q psy10348          7 LLIEENFYTCAWSMDLESG-RPLLAVAGSRAVIRIFSPAFH--AC--VRHF-----YGHGHAINELKFHPQDFNLLLSVS   76 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~-~~~l~~~~~dg~i~vw~~~~~--~~--~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~   76 (291)
                      +.|.-+++.+.|.|+...- -.+||+++.  .+|+|.+...  +.  ...+     ..+..++++..|+..+.+++.+++
T Consensus        93 fd~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS  170 (364)
T KOG0290|consen   93 FDHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS  170 (364)
T ss_pred             CCCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence            5688899999999986311 146666543  8999998632  11  1112     235579999999998999999999


Q ss_pred             cCCeEEEEECCCcce---eeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348         77 KDHTLRLWNIKTDIC---IAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST  152 (291)
Q Consensus        77 ~dg~i~vwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~  152 (291)
                      -|.+..|||++++..   ...+   -.|..+|..++|...+. .|++.+.||++|+||++..+-...+.+     +    
T Consensus       171 iDTTCTiWdie~~~~~~vkTQL---IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE-----~----  238 (364)
T KOG0290|consen  171 IDTTCTIWDIETGVSGTVKTQL---IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYE-----D----  238 (364)
T ss_pred             ccCeEEEEEEeeccccceeeEE---EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEec-----C----
Confidence            999999999998733   2233   58999999999998654 789999999999999998763322221     0    


Q ss_pred             ccccCccccCcccccccccCcceeEEEEc---CCEEEEecCC-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                      .....+...++|+   .+++++-..| ..|.+.|++...           .++.++..|...|+
T Consensus       239 ----------------p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~-----------tpva~L~~H~a~VN  291 (364)
T KOG0290|consen  239 ----------------PSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPC-----------TPVARLRNHQASVN  291 (364)
T ss_pred             ----------------CCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCC-----------cceehhhcCccccc
Confidence                            1124556778887   5688877765 579999998865           44899999999999


Q ss_pred             EEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        229 FIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      .++|+|+. ...|+++++|..+.+||+...-.....-..+.+. -.+.|+.++|++.
T Consensus       292 gIaWaPhS-~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~  346 (364)
T KOG0290|consen  292 GIAWAPHS-SSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSS  346 (364)
T ss_pred             ceEecCCC-CceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeeccc
Confidence            99999864 7899999999999999998753211111223332 4578999999964

>KOG1539|consensus

Probab=99.90  E-value=1.1e-21  Score=159.26  Aligned_cols=195  Identities=16%  Similarity=0.197  Sum_probs=168.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE---eeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF---YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      ..+++++.++.|+    +.+.|+..|.|-+||+++|.....+   +.|.++|+.++... -++.+++++.+|.+++||..
T Consensus       449 ~~~~av~vs~CGN----F~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~-~n~~~vsa~~~Gilkfw~f~  523 (910)
T KOG1539|consen  449 INATAVCVSFCGN----FVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDG-TNRLLVSAGADGILKFWDFK  523 (910)
T ss_pred             cceEEEEEeccCc----eEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecC-CCceEEEccCcceEEEEecC
Confidence            7789999999995    9999999999999999999988888   58999999999998 77899999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +...+..+    .-...+.++..+.....++.+..|-.|+++|..+.+.++.+.                          
T Consensus       524 ~k~l~~~l----~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~--------------------------  573 (910)
T KOG1539|consen  524 KKVLKKSL----RLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFW--------------------------  573 (910)
T ss_pred             Ccceeeee----ccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhh--------------------------
Confidence            88877776    456778888888888899999999999999999999888875                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                        +|.+.|+.++|+  |++|++++.|++|++||+.++..            +..+....   .++.++++|+|.+||+..
T Consensus       574 --gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~l------------ID~~~vd~---~~~sls~SPngD~LAT~H  636 (910)
T KOG1539|consen  574 --GHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTL------------IDGLLVDS---PCTSLSFSPNGDFLATVH  636 (910)
T ss_pred             --ccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcce------------eeeEecCC---cceeeEECCCCCEEEEEE
Confidence              499999999999  88999999999999999998854            44443332   245566778899999999


Q ss_pred             CC-CcEEEEEcCC
Q psy10348        246 QS-GRTYVWDLDV  257 (291)
Q Consensus       246 ~d-g~i~vwd~~~  257 (291)
                      .| .-|++|.-.+
T Consensus       637 vd~~gIylWsNks  649 (910)
T KOG1539|consen  637 VDQNGIYLWSNKS  649 (910)
T ss_pred             ecCceEEEEEchh
Confidence            88 6799997654

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=2.1e-20  Score=145.97  Aligned_cols=213  Identities=13%  Similarity=0.056  Sum_probs=145.7

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      .++++++.|+.|++||+.+++.+..+..+. .+..++|+| ++..+ ++++.++.|++||..+++....+   ..+ ..+
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---~~~-~~~   75 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIGTL---PSG-PDP   75 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEEec---cCC-CCc
Confidence            488999999999999999999888887654 467899999 77765 66778899999999988877665   333 335


Q ss_pred             EEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        106 LSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      ..++|+|+++.++++ +.|+.+++||+++.+.+..+.                             +...+.+++|+  +
T Consensus        76 ~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-----------------------------~~~~~~~~~~~~dg  126 (300)
T TIGR03866        76 ELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP-----------------------------VGVEPEGMAVSPDG  126 (300)
T ss_pred             cEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee-----------------------------CCCCcceEEECCCC
Confidence            678999999977655 568999999998866543332                             12234667887  6


Q ss_pred             CEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCCCC
Q psy10348        183 DFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQDP  260 (291)
Q Consensus       183 ~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~  260 (291)
                      ++++++..++ .+.+||..+.+.            ........ ...  .++++|++++|+++ ..++.|++||+.+++.
T Consensus       127 ~~l~~~~~~~~~~~~~d~~~~~~------------~~~~~~~~-~~~--~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~  191 (300)
T TIGR03866       127 KIVVNTSETTNMAHFIDTKTYEI------------VDNVLVDQ-RPR--FAEFTADGKELWVSSEIGGTVSVIDVATRKV  191 (300)
T ss_pred             CEEEEEecCCCeEEEEeCCCCeE------------EEEEEcCC-Ccc--EEEECCCCCEEEEEcCCCCEEEEEEcCccee
Confidence            7888777664 567789876533            22221111 122  34556779988655 4699999999998754


Q ss_pred             CcceeEEEec-cccccceeeeEEccCCcee
Q psy10348        261 SSIKFQILSH-PRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       261 ~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l  289 (291)
                      .......... .........++|+|+|+++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~  221 (300)
T TIGR03866       192 IKKITFEIPGVHPEAVQPVGIKLTKDGKTA  221 (300)
T ss_pred             eeeeeecccccccccCCccceEECCCCCEE
Confidence            3211110000 0011134568899999874

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0642|consensus

Probab=99.89  E-value=3.5e-22  Score=155.42  Aligned_cols=234  Identities=16%  Similarity=0.219  Sum_probs=169.3

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--------cceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--------HACVRHFYGHGHAINELKFHPQDFNLLLSVSKD   78 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d   78 (291)
                      ..|.+.|+.++|.|..    ..|++++.||++.+|+++.        -+++.+|++|.++|.|++..+ ++..+++|+.|
T Consensus       291 ~s~~d~ir~l~~~~se----p~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~-n~~~~ysgg~D  365 (577)
T KOG0642|consen  291 RSHDDCIRALAFHPSE----PVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPS-NGEHCYSGGID  365 (577)
T ss_pred             ecchhhhhhhhcCCCC----CeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecC-CceEEEeeccC
Confidence            3577889999999988    5999999999999999932        256888999999999999999 99999999999


Q ss_pred             CeEEEEECCCc------c-eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc--------c
Q psy10348         79 HTLRLWNIKTD------I-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE--------S  143 (291)
Q Consensus        79 g~i~vwd~~~~------~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--------~  143 (291)
                      |+|+.|++...      . .......+.+|.+.|+.+++++....|++++.||+++.|+...... .++..        .
T Consensus       366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Pls  444 (577)
T KOG0642|consen  366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLS  444 (577)
T ss_pred             ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcce
Confidence            99999966421      1 1111122479999999999999999999999999999999876655 11111        1


Q ss_pred             cccCCCCccccccCccccCc--------------ccc--cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        144 YTFNPARSTRPFDTQKEHFP--------------QFS--TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      +.+........+..+....-              ...  +.......+..+.++  ..+.+++..|+.|+++|..++.. 
T Consensus       445 vd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~-  523 (577)
T KOG0642|consen  445 VDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKI-  523 (577)
T ss_pred             EeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccccc-
Confidence            11111110000000000000              000  001122445666666  66899999999999999998854 


Q ss_pred             ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        206 ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                                 ++....|...++++++.  |+|.+|++|+.||.+++|.+....+
T Consensus       524 -----------l~s~~a~~~svtslai~--~ng~~l~s~s~d~sv~l~kld~k~~  565 (577)
T KOG0642|consen  524 -----------LHSMVAHKDSVTSLAID--PNGPYLMSGSHDGSVRLWKLDVKTC  565 (577)
T ss_pred             -----------chheeeccceecceeec--CCCceEEeecCCceeehhhccchhe
Confidence                       77777777777766555  6699999999999999999987653

>KOG0294|consensus

Probab=99.89  E-value=7.7e-21  Score=138.17  Aligned_cols=223  Identities=16%  Similarity=0.189  Sum_probs=161.2

Q ss_pred             EEEEecCCCeEEEEccCCc------------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         28 LLAVAGSRAVIRIFSPAFH------------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      .+++|+....|.=+++.-.            .++..++.|.+++++++.+.   .++|+|+.|-+|+|||+++...+..+
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~---~~~aSGssDetI~IYDm~k~~qlg~l   79 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSG---PYVASGSSDETIHIYDMRKRKQLGIL   79 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecc---eeEeccCCCCcEEEEeccchhhhcce
Confidence            4666776666666654311            22456679999999999864   89999999999999999988888877


Q ss_pred             ccccCCCCceEEEEEccCCC--EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         96 GGVEGHRDEVLSADFDLLGT--KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                         ..|.+.|+++.|.+.-.  .|++|+.||.|.+|+.....++..++                            +|..
T Consensus        80 ---l~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK----------------------------~H~~  128 (362)
T KOG0294|consen   80 ---LSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLK----------------------------AHKG  128 (362)
T ss_pred             ---eccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeec----------------------------cccc
Confidence               78999999999998765  89999999999999999887766554                            5999


Q ss_pred             ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeee-----------------eeecCC--------ccc
Q psy10348        174 YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII-----------------NRLNFK--------DCE  226 (291)
Q Consensus       174 ~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--------~~~  226 (291)
                      .|+.++.+  +++.++.+.|+.++.|++-.++......-......+                 ..++..        ..+
T Consensus       129 ~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~  208 (362)
T KOG0294|consen  129 QVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENP  208 (362)
T ss_pred             ccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhcc
Confidence            99999998  778889999999999999777654221111111111                 001100        111


Q ss_pred             EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE--ccCCceeeC
Q psy10348        227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL--SKNGNVLLC  291 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~s  291 (291)
                      ...++..+ -++..|++|++|+.|++||..+..+      .....+|..+|-++.+  .|++.+|++
T Consensus       209 ~r~l~~~~-l~~~~L~vG~d~~~i~~~D~ds~~~------~~~~~AH~~RVK~i~~~~~~~~~~lvT  268 (362)
T KOG0294|consen  209 KRILCATF-LDGSELLVGGDNEWISLKDTDSDTP------LTEFLAHENRVKDIASYTNPEHEYLVT  268 (362)
T ss_pred             ccceeeee-cCCceEEEecCCceEEEeccCCCcc------ceeeecchhheeeeEEEecCCceEEEE
Confidence            12233333 2488999999999999999998643      2333478888888874  345666653

>KOG1007|consensus

Probab=99.89  E-value=3.4e-21  Score=138.55  Aligned_cols=213  Identities=18%  Similarity=0.262  Sum_probs=162.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-eEEEe-----eeccceeEEEEec-CCCcEEEEeecCCeE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-VRHFY-----GHGHAINELKFHP-QDFNLLLSVSKDHTL   81 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-~~~~~-----~~~~~v~~~~~~~-~~~~~l~s~~~dg~i   81 (291)
                      +-+.|.|+.|.|++.    .+++-. |..|.+|+++.+.. ++.+.     ++....++-+|+| .+++.+++.+ |+++
T Consensus       122 avg~i~cvew~Pns~----klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl  195 (370)
T KOG1007|consen  122 AVGKINCVEWEPNSD----KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTL  195 (370)
T ss_pred             HhCceeeEEEcCCCC----eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcE
Confidence            346899999999874    666654 78999999987755 33332     3556778889998 6778888754 7999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      ..||+++.++...+.  ..|...|..+.|+|+-+ +|++++.||.|++||++..+.                        
T Consensus       196 ~~~D~RT~~~~~sI~--dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~------------------------  249 (370)
T KOG1007|consen  196 QFWDLRTMKKNNSIE--DAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF------------------------  249 (370)
T ss_pred             EEEEccchhhhcchh--hhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc------------------------
Confidence            999999888777775  68999999999999976 688999999999999987652                        


Q ss_pred             cCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccc-----------------cccCCCceeeeeee
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKE-----------------LRTNETNVTIINRL  220 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~-----------------~~~~~~~~~~~~~~  220 (291)
                         .+..+.+|...|.++.|+   .+++++|+.|..|.+|.........                 .+........+.++
T Consensus       250 ---pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~ty  326 (370)
T KOG1007|consen  250 ---PVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETY  326 (370)
T ss_pred             ---cccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccc
Confidence               123334699999999998   6799999999999999865443210                 00001122345688


Q ss_pred             cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       221 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ..|...|++++|+- .|.-.+|+-+.||.+.|=.+..
T Consensus       327 dehEDSVY~~aWSs-adPWiFASLSYDGRviIs~V~r  362 (370)
T KOG1007|consen  327 DEHEDSVYALAWSS-ADPWIFASLSYDGRVIISSVPR  362 (370)
T ss_pred             cccccceEEEeecc-CCCeeEEEeccCceEEeecCCh
Confidence            89999999988874 4456778889999998866654

>KOG2055|consensus

Probab=99.89  E-value=6.7e-22  Score=150.39  Aligned_cols=234  Identities=14%  Similarity=0.143  Sum_probs=177.7

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EEeeec-cceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HFYGHG-HAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ..-+|.++.|.|++.   ..+++++....++.||+++.+..+  ...++. ..+.....++ ++++|+..+..|.|.+..
T Consensus       256 ~~fPi~~a~f~p~G~---~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLh  331 (514)
T KOG2055|consen  256 EKFPIQKAEFAPNGH---SVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLH  331 (514)
T ss_pred             ccCccceeeecCCCc---eEEEecccceEEEEeeccccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeeh
Confidence            357889999999985   589999999999999999876533  233443 4577788899 889999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ..+++.+..+    .-.+.|..++|+.+++.|++++.+|.|.+||++...++..+..                       
T Consensus       332 akT~eli~s~----KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D-----------------------  384 (514)
T KOG2055|consen  332 AKTKELITSF----KIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVD-----------------------  384 (514)
T ss_pred             hhhhhhhhee----eeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEee-----------------------
Confidence            9999998887    5678999999999999999999999999999999987776652                       


Q ss_pred             ccccccCcce--eEEE--EcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        166 STRDIHRNYV--DCVR--WLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       166 ~~~~~~~~~v--~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                            .+.|  ++++  .++.+|++|+..|.|.|||..+....      ...+++..+..-...|+.+.|.  +|.++|
T Consensus       385 ------~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s------~~PkPik~~dNLtt~Itsl~Fn--~d~qiL  450 (514)
T KOG2055|consen  385 ------DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFAS------TNPKPIKTVDNLTTAITSLQFN--HDAQIL  450 (514)
T ss_pred             ------cCccceeeeeecCCCceEEeccCcceEEEeccchhhcc------CCCCchhhhhhhheeeeeeeeC--cchhhh
Confidence                  2222  2333  34889999999999999997543211      1114456665556667776666  559999


Q ss_pred             EEEc--CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        242 AVGN--QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       242 ~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      |.+|  .+..+++..+.+..........   ..--+.|+|++|||.|-+||
T Consensus       451 AiaS~~~knalrLVHvPS~TVFsNfP~~---n~~vg~vtc~aFSP~sG~lA  498 (514)
T KOG2055|consen  451 AIASRVKKNALRLVHVPSCTVFSNFPTS---NTKVGHVTCMAFSPNSGYLA  498 (514)
T ss_pred             hhhhhccccceEEEeccceeeeccCCCC---CCcccceEEEEecCCCceEE
Confidence            8888  5678999999876321111111   02235799999999999887

>KOG1445|consensus

Probab=99.89  E-value=4.3e-22  Score=157.56  Aligned_cols=119  Identities=20%  Similarity=0.267  Sum_probs=99.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--e----EEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--V----RHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~----~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      .|.+.|+.+.|+|-..   .+||+|+.|..|+||.+..+-.  +    ..+.+..-.|.++.|+|....+|+++ .-|.+
T Consensus        77 ~H~d~VtDl~FspF~D---~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~-a~g~v  152 (1012)
T KOG1445|consen   77 AHGDQVTDLGFSPFAD---ELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASG-AHGSV  152 (1012)
T ss_pred             cccceeeccCccccch---hhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEec-cCceE
Confidence            5789999999999654   6999999999999999985421  1    12223345789999999655566665 46899


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                      +|||+.+++.+..+   .+|...|.+..|+.||.+|++++.|+.|+|||.+.
T Consensus       153 ~i~D~stqk~~~el---~~h~d~vQSa~WseDG~llatscKdkqirifDPRa  201 (1012)
T KOG1445|consen  153 YITDISTQKTAVEL---SGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRA  201 (1012)
T ss_pred             EEEEcccCceeecc---cCCchhhhccccccCCceEeeecCCcceEEeCCcc
Confidence            99999999998888   79999999999999999999999999999999864

>KOG1034|consensus

Probab=99.88  E-value=6.1e-22  Score=144.63  Aligned_cols=221  Identities=18%  Similarity=0.235  Sum_probs=161.0

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE---eeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF---YGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ....|...|+.+.++|+..   +++++++.|..||+|++++..++..+   .+|.+.|.++.|++ ++.+|++++.|.++
T Consensus       130 ~~~ghG~sINeik~~p~~~---qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~-~gd~i~ScGmDhsl  205 (385)
T KOG1034|consen  130 NYRGHGGSINEIKFHPDRP---QLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSL-DGDRIASCGMDHSL  205 (385)
T ss_pred             ceeccCccchhhhcCCCCC---cEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcC-CCCeeeccCCcceE
Confidence            3457899999999999987   79999999999999999999998887   58999999999999 99999999999999


Q ss_pred             EEEECCCcce-------------------------eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-ch
Q psy10348         82 RLWNIKTDIC-------------------------IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PE  135 (291)
Q Consensus        82 ~vwd~~~~~~-------------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~  135 (291)
                      ++|++...+.                         ...+....-|...|-|+.|-  |.++++=+-++.|..|.... .+
T Consensus       206 k~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e  283 (385)
T KOG1034|consen  206 KLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEE  283 (385)
T ss_pred             EEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhh
Confidence            9999983211                         11111224577778888885  67899989999999998732 22


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      .+....     .|.....          .+...+.....|.-+.|.    ++.|+.|...|.|.+||++..++.      
T Consensus       284 ~~~~vk-----p~es~~T----------i~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~------  342 (385)
T KOG1034|consen  284 SIHNVK-----PPESATT----------ILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPP------  342 (385)
T ss_pred             hhhccC-----CCcccee----------eeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCc------
Confidence            111110     1111111          111222244456666665    779999999999999999987652      


Q ss_pred             CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        212 TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       212 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                          ...++..+...-.+-..+++.|+.+|+..++|++|.-||..
T Consensus       343 ----~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  343 ----KCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ----cCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence                12333333333444556666779999999999999999864

>KOG1538|consensus

Probab=99.88  E-value=5.6e-21  Score=152.18  Aligned_cols=225  Identities=15%  Similarity=0.249  Sum_probs=162.1

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ......|+.++|-||++   +++++++  ..+.+||...|.+++.+++|++.|.+++|+. +|+.+|+|+.|..|.+|..
T Consensus         9 ~~~~hci~d~afkPDGs---qL~lAAg--~rlliyD~ndG~llqtLKgHKDtVycVAys~-dGkrFASG~aDK~VI~W~~   82 (1081)
T KOG1538|consen    9 DKAEHCINDIAFKPDGT---QLILAAG--SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAK-DGKRFASGSADKSVIIWTS   82 (1081)
T ss_pred             cccccchheeEECCCCc---eEEEecC--CEEEEEeCCCcccccccccccceEEEEEEcc-CCceeccCCCceeEEEecc
Confidence            33445899999999997   4555543  4899999999999999999999999999999 9999999999999999986


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +-... ..    ..|++.|.|+.|+|-.+.|++++.. ..-+|........+. .                         
T Consensus        83 klEG~-Lk----YSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K~-k-------------------------  130 (1081)
T KOG1538|consen   83 KLEGI-LK----YSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSKH-K-------------------------  130 (1081)
T ss_pred             cccce-ee----eccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHhh-h-------------------------
Confidence            53332 33    3799999999999999999998863 366787665443221 1                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE---------------
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF---------------  229 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------------  229 (291)
                          ....|.+++|.  |++++.|-.+|+|.+-+-...+...+.          .-.+...+|+.               
T Consensus       131 ----ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~----------Rpgg~Nspiwsi~~~p~sg~G~~di~  196 (1081)
T KOG1538|consen  131 ----SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIE----------RPGGSNSPIWSICWNPSSGEGRNDIL  196 (1081)
T ss_pred             ----hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEe----------CCCCCCCCceEEEecCCCCCCccceE
Confidence                34568888997  889999999999998754332221111          11111111111               


Q ss_pred             -----------------------------EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeee
Q psy10348        230 -----------------------------IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQT  280 (291)
Q Consensus       230 -----------------------------~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~  280 (291)
                                                   .+++.-++|.++..|+.|+.+.+|.-..-     .+-++..  ....|+.+
T Consensus       197 aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~Gv-----rLGTvg~--~D~WIWtV  269 (1081)
T KOG1538|consen  197 AVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGV-----RLGTVGE--QDSWIWTV  269 (1081)
T ss_pred             EEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCe-----EEeeccc--cceeEEEE
Confidence                                         12223356889999999998988875442     1223332  34689999


Q ss_pred             EEccCCceee
Q psy10348        281 TLSKNGNVLL  290 (291)
Q Consensus       281 ~~s~~g~~l~  290 (291)
                      +..|++++++
T Consensus       270 ~~~PNsQ~v~  279 (1081)
T KOG1538|consen  270 QAKPNSQYVV  279 (1081)
T ss_pred             EEccCCceEE
Confidence            9999998865

>KOG1063|consensus

Probab=99.88  E-value=4.8e-21  Score=152.56  Aligned_cols=218  Identities=23%  Similarity=0.245  Sum_probs=162.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCC-----CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSR-----AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      .|.-.|+|++.+|+++    ++|+++..     ..|++|+..+....+.+.+|.-.|+.|+|+| |+++|++.+.|.++.
T Consensus       523 GHGyEv~~l~~s~~gn----liASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSp-dg~~LLsvsRDRt~s  597 (764)
T KOG1063|consen  523 GHGYEVYALAISPTGN----LIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSP-DGRYLLSVSRDRTVS  597 (764)
T ss_pred             cCceeEEEEEecCCCC----EEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECC-CCcEEEEeecCceEE
Confidence            5788999999999995    99999764     4799999999988889999999999999999 999999999999999


Q ss_pred             EEECCCcce-eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc--hhhhhhccccccCCCCccccccCcc
Q psy10348         83 LWNIKTDIC-IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP--EIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        83 vwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      +|....+.. ...+...+.|+.-|.++.|+|++.+|+|++.|++|++|.....  +.+..+.                  
T Consensus       598 l~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a------------------  659 (764)
T KOG1063|consen  598 LYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFA------------------  659 (764)
T ss_pred             eeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhc------------------
Confidence            998754321 1223334789999999999999999999999999999999877  3332211                  


Q ss_pred             ccCcccccccccCcceeEEEEc-------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL-------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~-------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                              ...+...|++++|.       +..++.|-..|.|.+|...................+.....+...|..+.|
T Consensus       660 --------~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w  731 (764)
T KOG1063|consen  660 --------CLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLW  731 (764)
T ss_pred             --------hhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEe
Confidence                    01267789999886       347889999999999986522211000000011112333445566666666


Q ss_pred             Eec--------CCCcEEEEEcCCCcEEEEEcC
Q psy10348        233 SMD--------YWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       233 ~~~--------~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      .+.        .....|++|+.|..++++++.
T Consensus       732 ~p~~~~~~~~~~~~l~la~~g~D~~vri~nv~  763 (764)
T KOG1063|consen  732 RPTCSDDWVEDKEWLNLAVGGDDESVRIFNVD  763 (764)
T ss_pred             ccccccccccccceeEEeeecccceeEEeecc
Confidence            643        223467999999999999874

>KOG0650|consensus

Probab=99.88  E-value=1.9e-20  Score=146.98  Aligned_cols=237  Identities=15%  Similarity=0.174  Sum_probs=168.8

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-----------------
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-----------------   67 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------   67 (291)
                      +.-.|.+.|.|++..|.++    .||+|+.||+|+||.+.+|+++++++ ..+.|.+++|+|.                 
T Consensus       395 vyrGHtg~Vr~iSvdp~G~----wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~iv  469 (733)
T KOG0650|consen  395 VYRGHTGLVRSISVDPSGE----WLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIV  469 (733)
T ss_pred             eEeccCCeEEEEEecCCcc----eeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEe
Confidence            3446899999999999985    99999999999999999999988765 3456677777662                 


Q ss_pred             --------------------------------------------------------------CCcEEEEeecC---CeEE
Q psy10348         68 --------------------------------------------------------------DFNLLLSVSKD---HTLR   82 (291)
Q Consensus        68 --------------------------------------------------------------~~~~l~s~~~d---g~i~   82 (291)
                                                                                    .|.+|++...+   ..|.
T Consensus       470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl  549 (733)
T KOG0650|consen  470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL  549 (733)
T ss_pred             CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence                                                                          22233332211   1233


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      |+++........|   ....+-|.++.|+|...+|++++. ..|++||+..+..+..+..                    
T Consensus       550 iHQLSK~~sQ~PF---~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~t--------------------  605 (733)
T KOG0650|consen  550 IHQLSKRKSQSPF---RKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLT--------------------  605 (733)
T ss_pred             EEecccccccCch---hhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhc--------------------
Confidence            3333322222222   345677899999999999999885 6799999999888877653                    


Q ss_pred             cccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                              ....|..++.+  |+.|+.|+.|+.+..||+.-..           ++.+++..|...+..+++.  +.-.+
T Consensus       606 --------g~kwiS~msihp~GDnli~gs~d~k~~WfDldlss-----------kPyk~lr~H~~avr~Va~H--~ryPL  664 (733)
T KOG0650|consen  606 --------GSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSS-----------KPYKTLRLHEKAVRSVAFH--KRYPL  664 (733)
T ss_pred             --------CCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCc-----------chhHHhhhhhhhhhhhhhc--cccce
Confidence                    34457777777  7899999999999999997654           3477788888888776665  44889


Q ss_pred             EEEEcCCCcEEEEEcCCCCCC-c--ceeEEEeccccccc----eeeeEEccCCceeeC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPS-S--IKFQILSHPRCMSA----VRQTTLSKNGNVLLC  291 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~-~--~~~~~~~~~~~~~~----v~~~~~s~~g~~l~s  291 (291)
                      +++|+.||++.|+.-.-...+ +  .+..+-..++|...    |..+.|+|...+|++
T Consensus       665 fas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfs  722 (733)
T KOG0650|consen  665 FASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFS  722 (733)
T ss_pred             eeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEe
Confidence            999999999999864322110 0  11222234456544    899999999988864

>KOG1188|consensus

Probab=99.88  E-value=6.6e-21  Score=139.91  Aligned_cols=197  Identities=17%  Similarity=0.236  Sum_probs=152.6

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      ..+|++...|.|++||..+++.+..++++...++.+.|... .++.+.+|+.||+|++||++.......+........+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            47999999999999999999999999999999999999763 56889999999999999999877666553222223567


Q ss_pred             EEEEEccCCCEEEEEec----CCcEEEEeccCchh-hhhhccccccCCCCccccccCccccCcccccccccCcceeEEEE
Q psy10348        106 LSADFDLLGTKIMSCGM----DHSLKLWDLTKPEI-KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW  180 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  180 (291)
                      .+++.+-.++.+++|..    |-.|.+||.|..+. +..+.                           +.|...|++++|
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~---------------------------eSH~DDVT~lrF  173 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLN---------------------------ESHNDDVTQLRF  173 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhh---------------------------hhccCcceeEEe
Confidence            78887777888888864    77899999998776 44443                           359999999999


Q ss_pred             c---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        181 L---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       181 ~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      +   +++|++|+.||.|.+||+......         ..+...-.+...|..+.|.- +.-+.|.+-+..+...+|+++.
T Consensus       174 HP~~pnlLlSGSvDGLvnlfD~~~d~Ee---------DaL~~viN~~sSI~~igw~~-~~ykrI~clTH~Etf~~~ele~  243 (376)
T KOG1188|consen  174 HPSDPNLLLSGSVDGLVNLFDTKKDNEE---------DALLHVINHGSSIHLIGWLS-KKYKRIMCLTHMETFAIYELED  243 (376)
T ss_pred             cCCCCCeEEeecccceEEeeecCCCcch---------hhHHHhhcccceeeeeeeec-CCcceEEEEEccCceeEEEccC
Confidence            8   779999999999999999765332         11222333444455555542 2124688888899999999998


Q ss_pred             CCC
Q psy10348        258 QDP  260 (291)
Q Consensus       258 ~~~  260 (291)
                      +.+
T Consensus       244 ~~~  246 (376)
T KOG1188|consen  244 GSE  246 (376)
T ss_pred             CCh
Confidence            764

>KOG4378|consensus

Probab=99.88  E-value=2.1e-21  Score=149.33  Aligned_cols=228  Identities=12%  Similarity=0.138  Sum_probs=168.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      -.+.++.|+....   -.+++.+.|..+++|.-...  +....-+.-.+.-.|++... ...++++|+..+.|+|||++.
T Consensus        35 pg~~s~~w~~~n~---lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s-~S~y~~sgG~~~~Vkiwdl~~  110 (673)
T KOG4378|consen   35 PGDFSFNWQRRNF---LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACAS-QSLYEISGGQSGCVKIWDLRA  110 (673)
T ss_pred             Ccceeeeccccce---EEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhh-cceeeeccCcCceeeehhhHH
Confidence            4478888887652   23444567889999975422  22111111223445555555 457999999999999999996


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ..+.+.+   +.|...|+++.++-...+|++++..|.|.|..+.++.....+..                          
T Consensus       111 kl~hr~l---kdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~--------------------------  161 (673)
T KOG4378|consen  111 KLIHRFL---KDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTI--------------------------  161 (673)
T ss_pred             HHHhhhc---cCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceec--------------------------
Confidence            6666666   89999999999999999999999999999999988875544431                          


Q ss_pred             cccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        169 DIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       169 ~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                       .....|+-+.|+   ..+|.+++.+|.|.+||+......           ..-...|..+...++|+++ +..+|++.+
T Consensus       162 -~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~-----------~~~~~~HsAP~~gicfsps-ne~l~vsVG  228 (673)
T KOG4378|consen  162 -DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPI-----------FHASEAHSAPCRGICFSPS-NEALLVSVG  228 (673)
T ss_pred             -CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcc-----------cchhhhccCCcCcceecCC-ccceEEEec
Confidence             123456678887   448889999999999999877542           4455678888888888875 477889999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|.+|.+||.......    ..+.   ...+..+++|+++|.+|++
T Consensus       229 ~Dkki~~yD~~s~~s~----~~l~---y~~Plstvaf~~~G~~L~a  267 (673)
T KOG4378|consen  229 YDKKINIYDIRSQAST----DRLT---YSHPLSTVAFSECGTYLCA  267 (673)
T ss_pred             ccceEEEeeccccccc----ceee---ecCCcceeeecCCceEEEe
Confidence            9999999999976432    2222   2348899999999999975

>KOG1445|consensus

Probab=99.87  E-value=3.4e-21  Score=152.57  Aligned_cols=212  Identities=17%  Similarity=0.255  Sum_probs=151.9

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKD   78 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d   78 (291)
                      .+.....|+.+.|.|-..   ..||+++.||.|++|.+..+       .+...+..|.+.|+++.|+|--.+.|++++.|
T Consensus       623 ~l~Ngt~vtDl~WdPFD~---~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd  699 (1012)
T KOG1445|consen  623 GLFNGTLVTDLHWDPFDD---ERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYD  699 (1012)
T ss_pred             ccccCceeeecccCCCCh---HHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhcc
Confidence            345677899999999765   79999999999999998754       34567889999999999999888899999999


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      -+|++||+.++.....+   .+|.+.|..++|+|+|+.+++.+.||+|++|+.+.++..-.-.                 
T Consensus       700 ~Ti~lWDl~~~~~~~~l---~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg-----------------  759 (1012)
T KOG1445|consen  700 STIELWDLANAKLYSRL---VGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEG-----------------  759 (1012)
T ss_pred             ceeeeeehhhhhhhhee---ccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccC-----------------
Confidence            99999999999888888   8999999999999999999999999999999998776321000                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCC----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                        ..+       -...--.+.|.  |.++++.+.|    ..|.+||..+...          ..+.+......+- .+--
T Consensus       760 --~gp-------vgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~----------~pl~t~~lDvaps-~LvP  819 (1012)
T KOG1445|consen  760 --KGP-------VGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDL----------RPLYTQVLDVAPS-PLVP  819 (1012)
T ss_pred             --CCC-------ccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccC----------CcceeeeecccCc-cccc
Confidence              000       01111234443  7777666654    4677787665432          1121111110000 0011


Q ss_pred             EecCC-CcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        233 SMDYW-QKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       233 ~~~~~-~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      ..++| +.++++|-.|..|.+|++-..++
T Consensus       820 ~YD~Ds~~lfltGKGD~~v~~yEv~~esP  848 (1012)
T KOG1445|consen  820 HYDYDSNVLFLTGKGDRFVNMYEVIYESP  848 (1012)
T ss_pred             cccCCCceEEEecCCCceEEEEEecCCCc
Confidence            12334 45667788999999999987654

>KOG2106|consensus

Probab=99.87  E-value=7.8e-20  Score=140.90  Aligned_cols=243  Identities=13%  Similarity=0.162  Sum_probs=176.3

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ....|.+....++.+|+.+    .+++++.|+.+++|+  ..+++.+.. -..++.|+.|+| .+ .+|.|...|...+.
T Consensus       363 ~v~gh~delwgla~hps~~----q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhp-sg-~va~Gt~~G~w~V~  433 (626)
T KOG2106|consen  363 TVQGHGDELWGLATHPSKN----QLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHP-SG-VVAVGTATGRWFVL  433 (626)
T ss_pred             EEEecccceeeEEcCCChh----heeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccC-cc-eEEEeeccceEEEE
Confidence            3456888999999999985    999999999999999  455554443 468899999999 77 99999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |.++...+..-    ..+.++.++.|+|+|.+||.|+.|+.|++|.+..........                       
T Consensus       434 d~e~~~lv~~~----~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~-----------------------  486 (626)
T KOG2106|consen  434 DTETQDLVTIH----TDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRV-----------------------  486 (626)
T ss_pred             ecccceeEEEE----ecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEe-----------------------
Confidence            99986655543    338999999999999999999999999999987655322211                       


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC--Cceeeeeee----cCCcccEEEEEEEecC
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE--TNVTIINRL----NFKDCEIWFIRFSMDY  236 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~i~~~~~~~~~  236 (291)
                         ...+..+|+.+.|+  ++++.+.+.|-.|-.|..............  ...++.--|    ..+...+..++-  +.
T Consensus       487 ---~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~r--s~  561 (626)
T KOG2106|consen  487 ---GKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVAR--SH  561 (626)
T ss_pred             ---eeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhh--hh
Confidence               12255889999998  789999999999999954333221000000  000011001    112222333333  34


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +++++|+|.+.|+|++|...-.++..   ...+..+|++-|.+++|..+.+.|++
T Consensus       562 ~~~~lA~gdd~g~v~lf~yPc~s~rA---~~he~~ghs~~vt~V~Fl~~d~~li~  613 (626)
T KOG2106|consen  562 CEKLLASGDDFGKVHLFSYPCSSPRA---PSHEYGGHSSHVTNVAFLCKDSHLIS  613 (626)
T ss_pred             hhhhhhccccCceEEEEccccCCCcc---cceeeccccceeEEEEEeeCCceEEe
Confidence            58899999999999999987655322   33345589999999999998887764

>KOG0644|consensus

Probab=99.87  E-value=8.4e-22  Score=160.08  Aligned_cols=251  Identities=16%  Similarity=0.291  Sum_probs=178.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      +.|...|+|++|.-.+    .++++|+.|..++||..+++.++....+|.+.|+.++.+. +..++++++.|..|++|.+
T Consensus       187 lgH~naVyca~fDrtg----~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~-~n~~iaaaS~D~vIrvWrl  261 (1113)
T KOG0644|consen  187 LGHRNAVYCAIFDRTG----RYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSS-NNTMIAAASNDKVIRVWRL  261 (1113)
T ss_pred             Hhhhhheeeeeecccc----ceEeecCccceeeeeeccchhhhccCCCCccccchhccch-hhhhhhhcccCceEEEEec
Confidence            3578899999999888    6999999999999999999999999999999999999998 7789999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ..+.++..+   .+|++.|++++|+|-.    +.+.||++++||.+ ............+..+..... ..+......+.
T Consensus       262 ~~~~pvsvL---rghtgavtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s-~~~~~~~~~f~  332 (1113)
T KOG0644|consen  262 PDGAPVSVL---RGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDS-ILFENNGDRFL  332 (1113)
T ss_pred             CCCchHHHH---hccccceeeeccCccc----cCCCCCceEecccc-ccccccCCCCCCcccccceee-eeccccccccc
Confidence            999999988   8999999999999865    77889999999988 111111111111111100000 00000000000


Q ss_pred             c----ccccCcceeEEEEc-------------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348        167 T----RDIHRNYVDCVRWL-------------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       167 ~----~~~~~~~v~~~~~~-------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                      +    ..+..-...+++|.             ..+.+++-.+..+++|++.++..            .+...+|...+.+
T Consensus       333 Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l------------~H~l~ghsd~~yv  400 (1113)
T KOG0644|consen  333 TGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQL------------LHNLMGHSDEVYV  400 (1113)
T ss_pred             cccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchh------------hhhhcccccceee
Confidence            0    00011111122221             12445555677888999888754            6777788888888


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.+.+ .|.+...+++.||+..|||+..+.+++...     .+| +.+...+||+||..++
T Consensus       401 Ld~Hp-fn~ri~msag~dgst~iwdi~eg~pik~y~-----~gh-~kl~d~kFSqdgts~~  454 (1113)
T KOG0644|consen  401 LDVHP-FNPRIAMSAGYDGSTIIWDIWEGIPIKHYF-----IGH-GKLVDGKFSQDGTSIA  454 (1113)
T ss_pred             eeecC-CCcHhhhhccCCCceEeeecccCCcceeee-----ccc-ceeeccccCCCCceEe
Confidence            88776 346677889999999999999997654222     233 4666779999998775

>KOG2096|consensus

Probab=99.87  E-value=9.8e-21  Score=138.02  Aligned_cols=208  Identities=21%  Similarity=0.321  Sum_probs=138.1

Q ss_pred             EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc------------------------------------eee
Q psy10348         50 RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI------------------------------------CIA   93 (291)
Q Consensus        50 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~------------------------------------~~~   93 (291)
                      ..+++|.+.|++++|+. +|+.|+|++.|+.|++|+++.-.                                    .+.
T Consensus        80 ~~LKgH~~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~  158 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC  158 (420)
T ss_pred             hhhhccCCceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence            35689999999999999 99999999999999999976411                                    011


Q ss_pred             eecc--------------------ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccc
Q psy10348         94 IFGG--------------------VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR  153 (291)
Q Consensus        94 ~~~~--------------------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  153 (291)
                      .+..                    ...|...+..+-...++.+|++++.|..|.+|+++ |+.+..+....         
T Consensus       159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq---------  228 (420)
T KOG2096|consen  159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQ---------  228 (420)
T ss_pred             EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccc---------
Confidence            1100                    12234445555555567788888888889999988 66555443200         


Q ss_pred             cccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        154 PFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                       ....-..+..+|.++++++-.--|++|..--.+...+    ..+..+.++.+|...+...+|+
T Consensus       229 -----------------~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~f----qev~rvf~LkGH~saV~~~aFs  287 (420)
T KOG2096|consen  229 -----------------SSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTF----QEVKRVFSLKGHQSAVLAAAFS  287 (420)
T ss_pred             -----------------ccccceeeCCCCcEEEEecCCCCceEEEEEeccCcch----hhhhhhheeccchhheeeeeeC
Confidence                             1111223344488999999999999998643322111    1224577889999988776665


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCCCCc---ceeEEEecc--ccccceeeeEEccCCceeeC
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQDPSS---IKFQILSHP--RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~---~~~~~~~~~--~~~~~v~~~~~s~~g~~l~s  291 (291)
                        ++...+++.+.||++++||..-.-...   ..+.....+  ...+....++.+|.|+.||+
T Consensus       288 --n~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~  348 (420)
T KOG2096|consen  288 --NSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAV  348 (420)
T ss_pred             --CCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEe
Confidence              559999999999999999987432111   111111111  22344558999999998874

>KOG4328|consensus

Probab=99.86  E-value=1.7e-20  Score=142.65  Aligned_cols=208  Identities=18%  Similarity=0.197  Sum_probs=153.2

Q ss_pred             EccCCcceeEEEeeeccceeEEEEecCCC-cEEEEeecCCeEEEEECCCc----ceeeeeccccCCCCceEEEEEccCC-
Q psy10348         41 FSPAFHACVRHFYGHGHAINELKFHPQDF-NLLLSVSKDHTLRLWNIKTD----ICIAIFGGVEGHRDEVLSADFDLLG-  114 (291)
Q Consensus        41 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~-  114 (291)
                      +|+.+-......+-+.+.|++++|+|... +++|+|+.-|.|-+||+.+.    .-+..+   ..|..+|.++.|+|.+ 
T Consensus       171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f---~~hs~~Vs~l~F~P~n~  247 (498)
T KOG4328|consen  171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLF---TPHSGPVSGLKFSPANT  247 (498)
T ss_pred             cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEe---ccCCccccceEecCCCh
Confidence            33444445556677889999999999665 68999999999999999522    223344   6899999999999975 


Q ss_pred             CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC
Q psy10348        115 TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN  192 (291)
Q Consensus       115 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~  192 (291)
                      ..+++.+.||+|++-|++.......+.                          .+.....+..+.|+  ...++.+..=|
T Consensus       248 s~i~ssSyDGtiR~~D~~~~i~e~v~s--------------------------~~~d~~~fs~~d~~~e~~~vl~~~~~G  301 (498)
T KOG4328|consen  248 SQIYSSSYDGTIRLQDFEGNISEEVLS--------------------------LDTDNIWFSSLDFSAESRSVLFGDNVG  301 (498)
T ss_pred             hheeeeccCceeeeeeecchhhHHHhh--------------------------cCccceeeeeccccCCCccEEEeeccc
Confidence            489999999999999998876433222                          11133445666666  44566666666


Q ss_pred             eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc
Q psy10348        193 CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR  272 (291)
Q Consensus       193 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  272 (291)
                      ...+||+++....           ...+..|...|..+++.|- ...+||+++.|++.+|||++....-..  ..+....
T Consensus       302 ~f~~iD~R~~~s~-----------~~~~~lh~kKI~sv~~NP~-~p~~laT~s~D~T~kIWD~R~l~~K~s--p~lst~~  367 (498)
T KOG4328|consen  302 NFNVIDLRTDGSE-----------YENLRLHKKKITSVALNPV-CPWFLATASLDQTAKIWDLRQLRGKAS--PFLSTLP  367 (498)
T ss_pred             ceEEEEeecCCcc-----------chhhhhhhcccceeecCCC-CchheeecccCcceeeeehhhhcCCCC--cceeccc
Confidence            9999999987653           5556667777777777653 357899999999999999997654322  2455557


Q ss_pred             cccceeeeEEccCCceeeC
Q psy10348        273 CMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       273 ~~~~v~~~~~s~~g~~l~s  291 (291)
                      |...|.+..|||+|-.|++
T Consensus       368 HrrsV~sAyFSPs~gtl~T  386 (498)
T KOG4328|consen  368 HRRSVNSAYFSPSGGTLLT  386 (498)
T ss_pred             ccceeeeeEEcCCCCceEe
Confidence            8889999999999776764

>KOG0307|consensus

Probab=99.86  E-value=2e-21  Score=162.75  Aligned_cols=208  Identities=16%  Similarity=0.214  Sum_probs=163.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE--eeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF--YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|++.|..+.|++...   .+||+|+.||.|.|||+..-+.-...  ....+.|.+++|+....+.|++++.+|.+.|||
T Consensus       114 ~h~G~V~gLDfN~~q~---nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWD  190 (1049)
T KOG0307|consen  114 KHTGPVLGLDFNPFQG---NLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWD  190 (1049)
T ss_pred             ccCCceeeeeccccCC---ceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecc
Confidence            5889999999999875   69999999999999999875443333  234578999999987888999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCC---cEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDH---SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ++..+.+..+.. ......+..++|+|+.. .+++++.|.   .|.+||+|....-                        
T Consensus       191 lr~~~pii~ls~-~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP------------------------  245 (1049)
T KOG0307|consen  191 LRKKKPIIKLSD-TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSP------------------------  245 (1049)
T ss_pred             ccCCCccccccc-CCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCc------------------------
Confidence            998887777732 11224578999999864 666666644   5899999865422                        


Q ss_pred             CcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                         ...+.+|...|.++.|+   ..++++++.|+.|.+|+.++++.            +..+......+.-+.|++. +-
T Consensus       246 ---~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv------------l~~~p~~~nW~fdv~w~pr-~P  309 (1049)
T KOG0307|consen  246 ---LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV------------LGELPAQGNWCFDVQWCPR-NP  309 (1049)
T ss_pred             ---hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE------------eeecCCCCcceeeeeecCC-Cc
Confidence               22224599999999998   46999999999999999999844            7777776665555666652 24


Q ss_pred             cEEEEEcCCCcEEEEEcCCCC
Q psy10348        239 KILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      ..+++++-||.|.||.+.+..
T Consensus       310 ~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  310 SVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             chhhhheeccceeeeeeecCC
Confidence            488999999999999998765

>KOG0322|consensus

Probab=99.86  E-value=1.7e-20  Score=133.21  Aligned_cols=242  Identities=16%  Similarity=0.168  Sum_probs=170.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|...++++.|-.++     +|.+|...|.|.+|++++.+....++ .+...|+.+.-.| + ..+.+-+.|+.+.+|++
T Consensus        12 p~~~~v~s~~fqa~~-----rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p-~-d~l~tqgRd~~L~lw~i   84 (323)
T KOG0322|consen   12 PHSSSVTSVLFQANE-----RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIP-N-DSLDTQGRDPLLILWTI   84 (323)
T ss_pred             cccchheehhhccch-----hhhcccccceEEEEEeecCccchhhhhhccceeeceeecC-C-cchhhcCCCceEEEEEc
Confidence            567888999998876     79999999999999999998888888 6678899999888 5 67888899999999998


Q ss_pred             CCcceeeeecc--------------------------------------------------ccCCCCceEEEEEccC-CC
Q psy10348         87 KTDICIAIFGG--------------------------------------------------VEGHRDEVLSADFDLL-GT  115 (291)
Q Consensus        87 ~~~~~~~~~~~--------------------------------------------------~~~~~~~i~~~~~~~~-~~  115 (291)
                      ..+..+..-..                                                  ..+..+.+.|..|..+ +.
T Consensus        85 a~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s  164 (323)
T KOG0322|consen   85 AYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGS  164 (323)
T ss_pred             cCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccc
Confidence            75221110000                                                  0111234555554332 22


Q ss_pred             --EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC
Q psy10348        116 --KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE  191 (291)
Q Consensus       116 --~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d  191 (291)
                        ++++|.++|.+.+||+.++..+-.++.                  ..+.......|..+|.++.|.  -+.=++|+.+
T Consensus       165 ~~lllaGyEsghvv~wd~S~~~~~~~~~~------------------~~kv~~~~ash~qpvlsldyas~~~rGisgga~  226 (323)
T KOG0322|consen  165 TFLLLAGYESGHVVIWDLSTGDKIIQLPQ------------------SSKVESPNASHKQPVLSLDYASSCDRGISGGAD  226 (323)
T ss_pred             eEEEEEeccCCeEEEEEccCCceeecccc------------------ccccccchhhccCcceeeeechhhcCCcCCCcc
Confidence              567778899999999999854433322                  112233334599999999997  3345678888


Q ss_pred             CeEEEecCCCCC-ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec
Q psy10348        192 NCIICWKPGRLE-DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH  270 (291)
Q Consensus       192 ~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  270 (291)
                      ..+..|.+.... ..         ..-.+.......+..+.+-  ||++.+|+++.||.||||+.++..++    ..++ 
T Consensus       227 dkl~~~Sl~~s~gsl---------q~~~e~~lknpGv~gvrIR--pD~KIlATAGWD~RiRVyswrtl~pL----AVLk-  290 (323)
T KOG0322|consen  227 DKLVMYSLNHSTGSL---------QIRKEITLKNPGVSGVRIR--PDGKILATAGWDHRIRVYSWRTLNPL----AVLK-  290 (323)
T ss_pred             ccceeeeeccccCcc---------cccceEEecCCCccceEEc--cCCcEEeecccCCcEEEEEeccCCch----hhhh-
Confidence            889999886541 11         1112223334445555555  55999999999999999999998653    4555 


Q ss_pred             cccccceeeeEEccCCceeeC
Q psy10348        271 PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       271 ~~~~~~v~~~~~s~~g~~l~s  291 (291)
                       -|...|++++|+|+...+|+
T Consensus       291 -yHsagvn~vAfspd~~lmAa  310 (323)
T KOG0322|consen  291 -YHSAGVNAVAFSPDCELMAA  310 (323)
T ss_pred             -hhhcceeEEEeCCCCchhhh
Confidence             47789999999999777764

>KOG1063|consensus

Probab=99.86  E-value=1.4e-19  Score=144.29  Aligned_cols=270  Identities=16%  Similarity=0.199  Sum_probs=172.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      -|..+|+|+.|-|+.+. ..++++|+.||.|.+|.++...  .+..+++|...+.++  +. ........+.|+.+.+||
T Consensus        52 GH~a~VnC~~~l~~s~~-~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv--~a-~~~~~~~~~ad~~v~vw~  127 (764)
T KOG1063|consen   52 GHVARVNCVHWLPTSEI-VAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCV--VA-RSSVMTCKAADGTVSVWD  127 (764)
T ss_pred             CCccceEEEEEcccccc-cceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEE--Ee-eeeEEEeeccCceEEEee
Confidence            57899999999988742 2389999999999999998443  455666666555444  43 223333346788888988


Q ss_pred             CCCcc--e---------------------------------------------eeeeccccCCCCceEEEEEccCCC---
Q psy10348         86 IKTDI--C---------------------------------------------IAIFGGVEGHRDEVLSADFDLLGT---  115 (291)
Q Consensus        86 ~~~~~--~---------------------------------------------~~~~~~~~~~~~~i~~~~~~~~~~---  115 (291)
                      .+..+  +                                             ......+.+|.+.|.+++|...+.   
T Consensus       128 ~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~  207 (764)
T KOG1063|consen  128 KQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDL  207 (764)
T ss_pred             cCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcE
Confidence            74322  0                                             011112589999999999987654   


Q ss_pred             EEEEEecCCcEEEEeccCchhhhhhccccccC--CC-CccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC
Q psy10348        116 KIMSCGMDHSLKLWDLTKPEIKDACAESYTFN--PA-RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC  190 (291)
Q Consensus       116 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~  190 (291)
                      +|++++.|..||+|.+.-+.............  ++ ..........-....-..+.+|++.|.++.|+  +..|++++.
T Consensus       208 ~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASa  287 (764)
T KOG1063|consen  208 LLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASA  287 (764)
T ss_pred             EEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheeccc
Confidence            88999999999999987655333221111110  11 00001111111111112345899999999999  458999999


Q ss_pred             CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec
Q psy10348        191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH  270 (291)
Q Consensus       191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  270 (291)
                      |.++.+|......-.-...     -.+....+....-+..  -++|++..+++-+.-|-.++|......   ........
T Consensus       288 DksmiiW~pd~~tGiWv~~-----vRlGe~gg~a~GF~g~--lw~~n~~~ii~~g~~Gg~hlWkt~d~~---~w~~~~~i  357 (764)
T KOG1063|consen  288 DKSMIIWKPDENTGIWVDV-----VRLGEVGGSAGGFWGG--LWSPNSNVIIAHGRTGGFHLWKTKDKT---FWTQEPVI  357 (764)
T ss_pred             CcceEEEecCCccceEEEE-----EEeecccccccceeeE--EEcCCCCEEEEecccCcEEEEeccCcc---ceeecccc
Confidence            9999999876542211000     1122222233334444  455669999999999999999933221   11223334


Q ss_pred             cccccceeeeEEccCCceeeC
Q psy10348        271 PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       271 ~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+|...|.+++|+|.|.+|++
T Consensus       358 SGH~~~V~dv~W~psGeflLs  378 (764)
T KOG1063|consen  358 SGHVDGVKDVDWDPSGEFLLS  378 (764)
T ss_pred             ccccccceeeeecCCCCEEEE
Confidence            589999999999999999975

>KOG0649|consensus

Probab=99.85  E-value=1.9e-19  Score=126.69  Aligned_cols=206  Identities=18%  Similarity=0.210  Sum_probs=150.3

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---------c-ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---------H-ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---------~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      .|.+-+|+|..    ++|++|..+|.|.+..+.+         + ..+-..++|.++|..++|+.   .+|++|+ ||.|
T Consensus        12 tvf~qa~sp~~----~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d---~~Lls~g-dG~V   83 (325)
T KOG0649|consen   12 TVFAQAISPSK----QYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD---DFLLSGG-DGLV   83 (325)
T ss_pred             HHHHHhhCCcc----eEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh---hheeecc-CceE
Confidence            45566788888    6999999999999998753         1 23445689999999999994   5777776 5999


Q ss_pred             EEEECCCcce------eeeeccccCC-----CCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCC
Q psy10348         82 RLWNIKTDIC------IAIFGGVEGH-----RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPAR  150 (291)
Q Consensus        82 ~vwd~~~~~~------~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~  150 (291)
                      +=|..+....      +.... ...|     -..|+++-..|..+-++.++.|+.++.||+++++..+++.         
T Consensus        84 ~gw~W~E~~es~~~K~lwe~~-~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~r---------  153 (325)
T KOG0649|consen   84 YGWEWNEEEESLATKRLWEVK-IPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYR---------  153 (325)
T ss_pred             EEeeehhhhhhccchhhhhhc-CccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEc---------
Confidence            9997654322      11110 0122     2468899999988888888899999999999999776654         


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                         +|.++|.++.-.  ...+++|++||++++||+++.+...+.........+    ...-.-|
T Consensus       154 -------------------GHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~l----Rp~~g~w  210 (325)
T KOG0649|consen  154 -------------------GHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLL----RPDWGKW  210 (325)
T ss_pred             -------------------CCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhc----CcccCce
Confidence                               699999999884  668999999999999999999775332221111111    1112345


Q ss_pred             EEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348        229 FIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      +.+++.+  ..+|++|+.- .+.+|++++.++.
T Consensus       211 igala~~--edWlvCGgGp-~lslwhLrsse~t  240 (325)
T KOG0649|consen  211 IGALAVN--EDWLVCGGGP-KLSLWHLRSSEST  240 (325)
T ss_pred             eEEEecc--CceEEecCCC-ceeEEeccCCCce
Confidence            6667765  8899988754 7999999998753

>KOG2445|consensus

Probab=99.85  E-value=9.1e-19  Score=127.15  Aligned_cols=214  Identities=16%  Similarity=0.264  Sum_probs=146.6

Q ss_pred             eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc----eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEE
Q psy10348         54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI----CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLK  127 (291)
Q Consensus        54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~  127 (291)
                      +|.+-|.++.|.+ .|+.+|+|+.|++|+|||.+...    +....   +.|.+.|..+.|.+-  |+.+++++.|+++.
T Consensus        11 ~h~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~W---rah~~Si~rV~WAhPEfGqvvA~cS~Drtv~   86 (361)
T KOG2445|consen   11 GHKDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSW---RAHDGSIWRVVWAHPEFGQVVATCSYDRTVS   86 (361)
T ss_pred             CCcceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeE---EecCCcEEEEEecCccccceEEEEecCCcee
Confidence            6889999999999 99999999999999999975442    33444   789999999999663  89999999999999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCC
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      ||.-........                   ..+.....++......|+.+.|.    |-.+++++.||.++||+.-..-
T Consensus        87 iWEE~~~~~~~~-------------------~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~  147 (361)
T KOG2445|consen   87 IWEEQEKSEEAH-------------------GRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPM  147 (361)
T ss_pred             eeeecccccccc-------------------cceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcc
Confidence            998642211100                   00011122223356678888886    5578888888888888753321


Q ss_pred             cc-------ccc------------------------------------------------cCCCceeeeeeecCCcccEE
Q psy10348        204 DK-------ELR------------------------------------------------TNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       204 ~~-------~~~------------------------------------------------~~~~~~~~~~~~~~~~~~i~  228 (291)
                      ..       ++.                                                .....-..+.++..+..+|.
T Consensus       148 nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~  227 (361)
T KOG2445|consen  148 NLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIR  227 (361)
T ss_pred             ccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcce
Confidence            11       000                                                00001123445567788899


Q ss_pred             EEEEEecC--CCcEEEEEcCCCcEEEEEcCCCC------------CCc--ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        229 FIRFSMDY--WQKILAVGNQSGRTYVWDLDVQD------------PSS--IKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       229 ~~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~------------~~~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .++|+|+-  .-.+||+++.|| |+||.+....            .+.  ....+-.+..|.+.|..+.|+-.|..|++
T Consensus       228 di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsS  305 (361)
T KOG2445|consen  228 DISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSS  305 (361)
T ss_pred             eeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEee
Confidence            99888753  235799999999 9999998411            110  11223335689999999999999998875

>KOG0303|consensus

Probab=99.84  E-value=1e-19  Score=136.22  Aligned_cols=165  Identities=16%  Similarity=0.253  Sum_probs=131.8

Q ss_pred             EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc-------eeeeeccccCCCCceEEEEEccCC-CEEEEEec
Q psy10348         51 HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-------CIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGM  122 (291)
Q Consensus        51 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~  122 (291)
                      .+.+|+++|..++|+|.+...||+|+.|.+|.||++..+.       ++..+   .+|...|-.++|+|.. +.|++++.
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L---~gH~rrVg~V~wHPtA~NVLlsag~  152 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVEL---YGHQRRVGLVQWHPTAPNVLLSAGS  152 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEE---eecceeEEEEeecccchhhHhhccC
Confidence            4569999999999999888999999999999999987653       33444   8999999999999974 58899999


Q ss_pred             CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCC
Q psy10348        123 DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       123 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~  200 (291)
                      |.+|.+|++.+++.+-++.                             |...|.++.|+  |.+|++.+.|..|+|||.+
T Consensus       153 Dn~v~iWnv~tgeali~l~-----------------------------hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr  203 (472)
T KOG0303|consen  153 DNTVSIWNVGTGEALITLD-----------------------------HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR  203 (472)
T ss_pred             CceEEEEeccCCceeeecC-----------------------------CCCeEEEEEeccCCceeeeecccceeEEEcCC
Confidence            9999999999998665443                             99999999998  8899999999999999999


Q ss_pred             CCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCC
Q psy10348        201 RLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDP  260 (291)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~  260 (291)
                      +++.            +..-..|.+.-. ....+-.++.++-+|-   ++..+-+||..+.+.
T Consensus       204 ~~~~------------v~e~~~heG~k~-~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~e  253 (472)
T KOG0303|consen  204 RGTV------------VSEGVAHEGAKP-ARAIFLASGKIFTTGFSRMSERQIALWDPNNLEE  253 (472)
T ss_pred             CCcE------------eeecccccCCCc-ceeEEeccCceeeeccccccccceeccCcccccC
Confidence            9854            555555543322 2223334477555553   678899999887653

>KOG0771|consensus

Probab=99.84  E-value=7.6e-20  Score=137.88  Aligned_cols=187  Identities=18%  Similarity=0.167  Sum_probs=130.3

Q ss_pred             eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhh
Q psy10348         60 NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA  139 (291)
Q Consensus        60 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~  139 (291)
                      .+++|+. ++..+++|+.||.+|+|+......+...   ..|...|.++.|+|||++|++-+.| ..+||+.+++..++.
T Consensus       148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~e---~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~  222 (398)
T KOG0771|consen  148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILEE---IAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALAR  222 (398)
T ss_pred             eEEEEcC-CCCEeeeccccceEEEEecCcchhhhhh---HhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhh
Confidence            6789999 8999999999999999998766666655   6899999999999999999999999 899999999965554


Q ss_pred             hccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C---C-EE-EEecCCCeEEEecCCCCCccccccCCC
Q psy10348        140 CAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G---D-FV-LSKSCENCIICWKPGRLEDKELRTNET  212 (291)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~---~-~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~  212 (291)
                      ...                          ..-......+.|.  +   . ++ +....-+.|+.||+.......+.    
T Consensus       223 ~t~--------------------------~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l----  272 (398)
T KOG0771|consen  223 KTP--------------------------FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL----  272 (398)
T ss_pred             cCC--------------------------cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc----
Confidence            321                          0012223344454  1   1 22 22333456666665443221000    


Q ss_pred             ceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        213 NVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       213 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                         ...+.......|.++++  +++|+++|.|+.||.|-+++..+.+.+    . +....|...|+.+.|+||.+++++
T Consensus       273 ---~~~~~~~~~~siSsl~V--S~dGkf~AlGT~dGsVai~~~~~lq~~----~-~vk~aH~~~VT~ltF~Pdsr~~~s  341 (398)
T KOG0771|consen  273 ---RLRKKIKRFKSISSLAV--SDDGKFLALGTMDGSVAIYDAKSLQRL----Q-YVKEAHLGFVTGLTFSPDSRYLAS  341 (398)
T ss_pred             ---chhhhhhccCcceeEEE--cCCCcEEEEeccCCcEEEEEeceeeee----E-eehhhheeeeeeEEEcCCcCcccc
Confidence               01111222234555544  566999999999999999999987532    2 223478899999999999998763

>KOG1587|consensus

Probab=99.84  E-value=1e-18  Score=141.89  Aligned_cols=248  Identities=14%  Similarity=0.106  Sum_probs=172.0

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEE----EeeeccceeEEEEecCCCc--EEEE
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRH----FYGHGHAINELKFHPQDFN--LLLS   74 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~----~~~~~~~v~~~~~~~~~~~--~l~s   74 (291)
                      |++.+.-...|+|+.|+|...   .++|.|..+|.|.+||+..+..  ...    ...|..+++.+.|.. +..  -+++
T Consensus       235 Pe~~~~~~s~v~~~~f~p~~p---~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~-~~~~~~f~s  310 (555)
T KOG1587|consen  235 PELVLESPSEVTCLKFCPFDP---NLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ-NEHNTEFFS  310 (555)
T ss_pred             ceEEEecCCceeEEEeccCCc---ceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec-cCCCCceEE
Confidence            567777889999999999876   6999999999999999987654  222    236889999999976 444  4999


Q ss_pred             eecCCeEEEEECCCcceee---eecccc------CCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhcccc
Q psy10348         75 VSKDHTLRLWNIKTDICIA---IFGGVE------GHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~~~---~~~~~~------~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                      ++.||.|..|+++.-....   ......      .....+++++|.+.. ..|+.|+.+|.|.--+....+....     
T Consensus       311 ~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~-----  385 (555)
T KOG1587|consen  311 LSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPE-----  385 (555)
T ss_pred             EecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccc-----
Confidence            9999999999876432211   110001      223468899998854 4788999999887744333221110     


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                                     ..+........|.++|.++.++   ...+++++ |.++++|......           .++..+.
T Consensus       386 ---------------~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~-----------~Pl~~~~  438 (555)
T KOG1587|consen  386 ---------------VSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIA-----------SPLLSLD  438 (555)
T ss_pred             ---------------ccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCC-----------Ccchhhh
Confidence                           0011222334589999999998   44555555 9999999987332           2366666


Q ss_pred             CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+...+..++|++.. ...++++..||.|.+||+......    .......+....+.+.|+++|+.|++
T Consensus       439 ~~~~~v~~vaWSptr-pavF~~~d~~G~l~iWDLl~~~~~----Pv~s~~~~~~~l~~~~~s~~g~~lav  503 (555)
T KOG1587|consen  439 SSPDYVTDVAWSPTR-PAVFATVDGDGNLDIWDLLQDDEE----PVLSQKVCSPALTRVRWSPNGKLLAV  503 (555)
T ss_pred             hccceeeeeEEcCcC-ceEEEEEcCCCceehhhhhccccC----CcccccccccccceeecCCCCcEEEE
Confidence            666667777777643 467888999999999999876542    22222233456778899999998863

>KOG1963|consensus

Probab=99.83  E-value=1.4e-17  Score=136.37  Aligned_cols=268  Identities=15%  Similarity=0.141  Sum_probs=179.3

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ...|...++|.++||.+    .++|+|..||.|.+|.--.    ....+.+.-|..+|.+++|++ +|.+|++|+..|.+
T Consensus       201 ~~~Htf~~t~~~~spn~----~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~-~G~~LlSGG~E~VL  275 (792)
T KOG1963|consen  201 TVHHTFNITCVALSPNE----RYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSS-DGAYLLSGGREGVL  275 (792)
T ss_pred             hhhhcccceeEEecccc----ceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEec-CCceEeecccceEE
Confidence            45567778999999999    5999999999999997432    234567788999999999999 99999999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----------------cc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----------------SY  144 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----------------~~  144 (291)
                      .+|.+.+++ .+.+   +.-.++|..+.++||+.+.+....|..|.+....+......+..                 .+
T Consensus       276 v~Wq~~T~~-kqfL---PRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~  351 (792)
T KOG1963|consen  276 VLWQLETGK-KQFL---PRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGV  351 (792)
T ss_pred             EEEeecCCC-cccc---cccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeE
Confidence            999999888 3444   67889999999999999999999999999998876665554432                 22


Q ss_pred             ccCCCCccccccCccccCccccccc-------------------ccCcceeEEEEc--CCEEEEecC----------CCe
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRD-------------------IHRNYVDCVRWL--GDFVLSKSC----------ENC  193 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~v~~~~~~--~~~l~~~~~----------d~~  193 (291)
                      ..+|......+.....+.+.+....                   .+.-.+++++.+  |++++|...          .-.
T Consensus       352 ~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~  431 (792)
T KOG1963|consen  352 SIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVS  431 (792)
T ss_pred             EEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEE
Confidence            2333222222332222222221110                   111223444443  566665432          224


Q ss_pred             EEEecCCCCCccccccCCCceee-eeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce-----eEE
Q psy10348        194 IICWKPGRLEDKELRTNETNVTI-INRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK-----FQI  267 (291)
Q Consensus       194 i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~~  267 (291)
                      +++|........        -.. ......|.....++++...+....+++++.||.+++|-+...+...+.     +..
T Consensus       432 LKFW~~n~~~kt--------~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~  503 (792)
T KOG1963|consen  432 LKFWQYNPNSKT--------FILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKA  503 (792)
T ss_pred             EEEEEEcCCcce--------eEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEee
Confidence            666765433221        011 122345666666666666555558999999999999999544322211     122


Q ss_pred             EeccccccceeeeEEccCCceeeC
Q psy10348        268 LSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       268 ~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ... -|..++++++|+.||..|++
T Consensus       504 i~s-y~k~~i~a~~fs~dGslla~  526 (792)
T KOG1963|consen  504 IGS-YHKTPITALCFSQDGSLLAV  526 (792)
T ss_pred             eec-cccCcccchhhcCCCcEEEE
Confidence            222 36789999999999998873

>KOG1523|consensus

Probab=99.83  E-value=1.9e-18  Score=126.12  Aligned_cols=219  Identities=10%  Similarity=0.043  Sum_probs=161.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      --++|+|.+|++|.+    .+|++-.+..|.||.....   +...+++.|...|+.++|+| ..+.|++++.|..-++|.
T Consensus         9 ~~~pitchAwn~drt----~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap-~snrIvtcs~drnayVw~   83 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRT----QIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAP-KSNRIVTCSHDRNAYVWT   83 (361)
T ss_pred             ccCceeeeeecCCCc----eEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecC-CCCceeEccCCCCccccc
Confidence            358999999999995    9999999999999997654   46778899999999999999 889999999999999999


Q ss_pred             CC-CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      .. .++....+ .+..++...+++.|+|.++.|++|+.-..|.||-++...--...+                       
T Consensus        84 ~~~~~~Wkptl-vLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsK-----------------------  139 (361)
T KOG1523|consen   84 QPSGGTWKPTL-VLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSK-----------------------  139 (361)
T ss_pred             cCCCCeeccce-eEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhh-----------------------
Confidence            84 44333222 236799999999999999999999999999999887654211000                       


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc---ccccCC---CceeeeeeecCCcccEEEEEEEecC
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK---ELRTNE---TNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                       ...+.+...|.++.|+  +-++++|+.|+..++|..--....   .-.++.   .....+.++....+.+..  ..++|
T Consensus       140 -hikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~--v~fs~  216 (361)
T KOG1523|consen  140 -HIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHG--VLFSP  216 (361)
T ss_pred             -hhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceee--eEeCC
Confidence             0002267789999999  338899999999999975221110   011111   111223333333444444  45556


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      +|..|+=.+.|..+.+-|.....
T Consensus       217 sG~~lawv~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  217 SGNRLAWVGHDSTVSFVDAAGPS  239 (361)
T ss_pred             CCCEeeEecCCCceEEeecCCCc
Confidence            69999999999999999988764

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.82  E-value=5.2e-17  Score=132.87  Aligned_cols=230  Identities=25%  Similarity=0.369  Sum_probs=176.8

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEeeecc-ceeEEEE-ecCCCc-EEEEeec-CCe
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFYGHGH-AINELKF-HPQDFN-LLLSVSK-DHT   80 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~-~v~~~~~-~~~~~~-~l~s~~~-dg~   80 (291)
                      ...+...+.++.+.+.+    ..++.++.|+.+.+|+...+. .+..+..+.. .+..+.+ .+ ++. .++..+. |+.
T Consensus        61 ~~~~~~~i~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~  135 (466)
T COG2319          61 LRGHEDSITSIAFSPDG----ELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSP-DGNSILLASSSLDGT  135 (466)
T ss_pred             eeeccceEEEEEECCCC----cEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECC-CcceEEeccCCCCcc
Confidence            45678999999999998    488888899999999998776 6666766443 6777777 77 555 5555444 999


Q ss_pred             EEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         81 LRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        81 i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      +.+|+... ......+   ..|...|..++|+|++..+++++. |+.+++|++..+.....+                  
T Consensus       136 ~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  194 (466)
T COG2319         136 VKLWDLSTPGKLIRTL---EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTL------------------  194 (466)
T ss_pred             EEEEEecCCCeEEEEE---ecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEee------------------
Confidence            99999987 5666666   689999999999999998888886 999999999985544333                  


Q ss_pred             cccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeee-eecCCcccEEEEEEEe
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN-RLNFKDCEIWFIRFSM  234 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~  234 (291)
                                ..|...+.+++|.  +. .+++++.|+.|++||......            +. .+..|.... ..  .+
T Consensus       195 ----------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~------------~~~~~~~~~~~~-~~--~~  249 (466)
T COG2319         195 ----------AGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKL------------LRSTLSGHSDSV-VS--SF  249 (466)
T ss_pred             ----------ccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcE------------EeeecCCCCcce-eE--eE
Confidence                      2388899999998  44 555558999999998774432            34 466666554 33  55


Q ss_pred             cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++.++++++.|+.+++|++.....   ....+  ..|...+.++.|+|++..+++
T Consensus       250 ~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~--~~~~~~v~~~~~~~~~~~~~~  301 (466)
T COG2319         250 SPDGSLLASGSSDGTIRLWDLRSSSS---LLRTL--SGHSSSVLSVAFSPDGKLLAS  301 (466)
T ss_pred             CCCCCEEEEecCCCcEEEeeecCCCc---EEEEE--ecCCccEEEEEECCCCCEEEE
Confidence            56688999999999999999998754   12222  466889999999998877753

>KOG2919|consensus

Probab=99.82  E-value=1.1e-18  Score=127.71  Aligned_cols=186  Identities=18%  Similarity=0.208  Sum_probs=139.6

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEcc-CCcceeE---EE----eeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSP-AFHACVR---HF----YGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~-~~~~~~~---~~----~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      -.+++|+||++    .|++|. ...|+++|+ +.|+.-.   ++    .+..+.+.+++|+|.+...++.|+...++-||
T Consensus       161 AhsL~Fs~DGe----qlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy  235 (406)
T KOG2919|consen  161 AHSLQFSPDGE----QLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIY  235 (406)
T ss_pred             heeEEecCCCC----eEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeE
Confidence            45899999995    777765 579999998 4554221   11    23467899999999888899999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCch-hhhhhccccccCCCCccccccCccccC
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      .-..++++..+   .+|.+.|+.++|.++|+.|++|.. |..|..||++... ++..+..                    
T Consensus       236 ~~~~~~pl~ll---ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~r--------------------  292 (406)
T KOG2919|consen  236 NDDGRRPLQLL---GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALER--------------------  292 (406)
T ss_pred             ecCCCCceeee---cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhh--------------------
Confidence            98888888888   799999999999999999999887 8889999998744 3333322                    


Q ss_pred             cccccccccCc-ceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        163 PQFSTRDIHRN-YVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       163 ~~~~~~~~~~~-~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                              |.. .=..|.|+    +++|++|+.||.|++||+......           +..+..+...++.+++.  |-
T Consensus       293 --------hv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~-----------~sv~~~~sd~vNgvsln--P~  351 (406)
T KOG2919|consen  293 --------HVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNE-----------VSVTGNYSDTVNGVSLN--PI  351 (406)
T ss_pred             --------hccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCc-----------ccccccccccccceecC--cc
Confidence                    322 22345554    889999999999999999874331           44445555555555554  44


Q ss_pred             CcEEEEEcCC
Q psy10348        238 QKILAVGNQS  247 (291)
Q Consensus       238 ~~~l~~~~~d  247 (291)
                      -.++|+++..
T Consensus       352 mpilatssGq  361 (406)
T KOG2919|consen  352 MPILATSSGQ  361 (406)
T ss_pred             cceeeeccCc
Confidence            7888888754

>KOG1524|consensus

Probab=99.81  E-value=9.4e-19  Score=136.18  Aligned_cols=197  Identities=14%  Similarity=0.202  Sum_probs=149.0

Q ss_pred             CCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        26 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      ...++.++.||.+.+.+- .++..+.+.+|.+.+.+-.|+| +|.-|+++++||.|++|. ++|-...++   .....+|
T Consensus        75 ~d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~-dGtgLlt~GEDG~iKiWS-rsGMLRStl---~Q~~~~v  148 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSP-DGAGLLTAGEDGVIKIWS-RSGMLRSTV---VQNEESI  148 (737)
T ss_pred             cceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCC-CCceeeeecCCceEEEEe-ccchHHHHH---hhcCcee
Confidence            358899999999999984 5888888999999999999999 999999999999999998 446555555   5677899


Q ss_pred             EEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CC
Q psy10348        106 LSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD  183 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~  183 (291)
                      +|++|.|+...++.+-. +.+.+=-+.....+                            -...+|.+-|.++.|+  .+
T Consensus       149 ~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~----------------------------i~WkAHDGiiL~~~W~~~s~  199 (737)
T KOG1524|consen  149 RCARWAPNSNSIVFCQG-GHISIKPLAANSKI----------------------------IRWRAHDGLVLSLSWSTQSN  199 (737)
T ss_pred             EEEEECCCCCceEEecC-CeEEEeecccccce----------------------------eEEeccCcEEEEeecCcccc
Confidence            99999999775554432 44555444332221                            1224599999999999  78


Q ss_pred             EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcc
Q psy10348        184 FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSI  263 (291)
Q Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~  263 (291)
                      ++++|++|-..++||-...             .+..-..|..+|++++|.  |+ +.++.++.+ ++|            
T Consensus       200 lI~sgGED~kfKvWD~~G~-------------~Lf~S~~~ey~ITSva~n--pd-~~~~v~S~n-t~R------------  250 (737)
T KOG1524|consen  200 IIASGGEDFRFKIWDAQGA-------------NLFTSAAEEYAITSVAFN--PE-KDYLLWSYN-TAR------------  250 (737)
T ss_pred             ceeecCCceeEEeecccCc-------------ccccCChhccceeeeeec--cc-cceeeeeee-eee------------
Confidence            9999999999999997543             256666788888887776  44 666666643 343            


Q ss_pred             eeEEEeccccccceeeeEEccCCceeeC
Q psy10348        264 KFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                          ++ ....+.|..++||+||..+++
T Consensus       251 ----~~-~p~~GSifnlsWS~DGTQ~a~  273 (737)
T KOG1524|consen  251 ----FS-SPRVGSIFNLSWSADGTQATC  273 (737)
T ss_pred             ----ec-CCCccceEEEEEcCCCceeec
Confidence                11 123468999999999998763

>KOG4227|consensus

Probab=99.81  E-value=1.6e-17  Score=124.90  Aligned_cols=249  Identities=13%  Similarity=0.094  Sum_probs=169.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC------cceeEEEe-eeccceeEEEEecCCCcEEEEeecCC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF------HACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      ..|.+.|+++.||.++    ++|++|+.|..+++|+++.      .+++.... .|...|.|++|.. ...++++|..++
T Consensus        53 ~~H~GCiNAlqFS~N~----~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~-~N~~~~SG~~~~  127 (609)
T KOG4227|consen   53 REHTGCINALQFSHND----RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL-ENRFLYSGERWG  127 (609)
T ss_pred             hhhccccceeeeccCC----eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc-CCeeEecCCCcc
Confidence            4688999999999987    6999999999999999863      34555443 4558999999998 889999999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      +|.+.|+++.+.+..+.. ....+.|+.+..+|..+.|++.+.++.|.+||.+..........     |           
T Consensus       128 ~VI~HDiEt~qsi~V~~~-~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~-----~-----------  190 (609)
T KOG4227|consen  128 TVIKHDIETKQSIYVANE-NNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVL-----P-----------  190 (609)
T ss_pred             eeEeeecccceeeeeecc-cCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceee-----e-----------
Confidence            999999999988887721 22334899999999999999999999999999987652211110     0           


Q ss_pred             ccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccC-----------------CCce-----
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTN-----------------ETNV-----  214 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----------------~~~~-----  214 (291)
                               .........+.|+   +.+|++.+..+-+.+||.+......+...                 ....     
T Consensus       191 ---------AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~ms  261 (609)
T KOG4227|consen  191 ---------ANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMS  261 (609)
T ss_pred             ---------cCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehh
Confidence                     0012224455665   55778888888888888776543311000                 0000     


Q ss_pred             ----------------eeeeeecCCc------ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC------------
Q psy10348        215 ----------------TIINRLNFKD------CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP------------  260 (291)
Q Consensus       215 ----------------~~~~~~~~~~------~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~------------  260 (291)
                                      -.+..+....      +.+..++|.   +..-+++|+.+-.|++|.+.....            
T Consensus       262 iRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~---~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~  338 (609)
T KOG4227|consen  262 IRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFI---DDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEE  338 (609)
T ss_pred             hhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeee---cceeeeccCcccceEEEecCCCccccCccccCcchh
Confidence                            0011111011      112233333   235599999999999999864211            


Q ss_pred             -------CcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        261 -------SSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       261 -------~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                             +...+.+  ..+|.+-++.+.|+|...+|++
T Consensus       339 ~~~~~~~i~~~~~V--LrGHRSv~NQVRF~~H~~~l~S  374 (609)
T KOG4227|consen  339 EMPSEIFIEKELTV--LRGHRSVPNQVRFSQHNNLLVS  374 (609)
T ss_pred             hCchhheecceeEE--EecccccccceeecCCcceEec
Confidence                   1111222  3488999999999999888764

>KOG1517|consensus

Probab=99.81  E-value=6.2e-18  Score=141.22  Aligned_cols=239  Identities=17%  Similarity=0.226  Sum_probs=166.8

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee---ccceeEEEEec-CCCcEEEEeecCCeEEEEECC
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH---GHAINELKFHP-QDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      +-..+.|+|-.    +.++++...-.|+|||.+.++.+..|..+   ...|+.+.+-. +|..++++|+.||.|+||+--
T Consensus      1066 ~pk~~~~hpf~----p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y 1141 (1387)
T KOG1517|consen 1066 PPKTLKFHPFE----PQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDY 1141 (1387)
T ss_pred             CCceeeecCCC----ceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccc
Confidence            34567888877    58999887889999999999998888644   35688888853 466799999999999999632


Q ss_pred             -C----cceeeeeccccCC----CCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         88 -T----DICIAIFGGVEGH----RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        88 -~----~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                       .    .+.+..+..+.++    .+.-.-+.|.....+|+++|.-..|+|||.........+..                
T Consensus      1142 ~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~---------------- 1205 (1387)
T KOG1517|consen 1142 ADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPY---------------- 1205 (1387)
T ss_pred             ccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeeccc----------------
Confidence             2    2333333222221    12224577888877888888789999999998876655431                


Q ss_pred             cccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                                 +....|+++.-+   |+.+++|..||.|++||.+.....         ..+..+..|...-.++.++..
T Consensus      1206 -----------~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d---------s~v~~~R~h~~~~~Iv~~slq 1265 (1387)
T KOG1517|consen 1206 -----------GSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPD---------SLVCVYREHNDVEPIVHLSLQ 1265 (1387)
T ss_pred             -----------CCCccceeecccccCCceEEEeecCCceEEeecccCCcc---------ccceeecccCCcccceeEEee
Confidence                       134446666555   789999999999999999876543         335666666655223444444


Q ss_pred             CCCc-EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        236 YWQK-ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       236 ~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|- .|++|+.||.|++||++.. ..........+....+..+++..+++...+|+
T Consensus      1266 ~~G~~elvSgs~~G~I~~~DlR~~-~~e~~~~iv~~~~yGs~lTal~VH~hapiiAs 1321 (1387)
T KOG1517|consen 1266 RQGLGELVSGSQDGDIQLLDLRMS-SKETFLTIVAHWEYGSALTALTVHEHAPIIAS 1321 (1387)
T ss_pred             cCCCcceeeeccCCeEEEEecccC-cccccceeeeccccCccceeeeeccCCCeeee
Confidence            4454 5999999999999999985 22233333333222346889999998888775

>KOG0649|consensus

Probab=99.80  E-value=1.8e-17  Score=116.82  Aligned_cols=194  Identities=15%  Similarity=0.164  Sum_probs=146.3

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      .--.|+++...|..+    -++.++.|+.++-||+++|+..+.+++|++.|.++.-.. ....+++|++||++++||.++
T Consensus       113 evPeINam~ldP~en----Si~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~-~~~qilsG~EDGtvRvWd~kt  187 (325)
T KOG0649|consen  113 EVPEINAMWLDPSEN----SILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRN-ANGQILSGAEDGTVRVWDTKT  187 (325)
T ss_pred             cCCccceeEeccCCC----cEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecc-cCcceeecCCCccEEEEeccc
Confidence            345688888888875    566666899999999999999999999999999999865 557899999999999999999


Q ss_pred             cceeeeeccc------cCC-CCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         89 DICIAIFGGV------EGH-RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        89 ~~~~~~~~~~------~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      +++++.+..+      ..| ...|-+++-  +...+++|+ ...+.+|.++..++...+.                    
T Consensus       188 ~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~vfp--------------------  244 (325)
T KOG0649|consen  188 QKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCVFP--------------------  244 (325)
T ss_pred             cceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEEEe--------------------
Confidence            9998887532      122 234556655  456787776 4679999999998776664                    


Q ss_pred             CcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        162 FPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                               -.+++..+.|..+.+++++..+.+.-|.+...-             -..........++..+..+| -++|
T Consensus       245 ---------ipa~v~~v~F~~d~vl~~G~g~~v~~~~l~Gvl-------------~a~ip~~s~~c~s~s~~~~p-~k~~  301 (325)
T KOG0649|consen  245 ---------IPARVHLVDFVDDCVLIGGEGNHVQSYTLNGVL-------------QANIPVESTACYSASWQTSP-IKFI  301 (325)
T ss_pred             ---------cccceeEeeeecceEEEeccccceeeeeeccEE-------------EEeccCCccceeeecccCCc-eEEE
Confidence                     566788899999999999999999999876431             22233334444555566566 5666


Q ss_pred             EEEcCCCcEEEE
Q psy10348        242 AVGNQSGRTYVW  253 (291)
Q Consensus       242 ~~~~~dg~i~vw  253 (291)
                      -.++..+++.++
T Consensus       302 s~ag~s~~~~i~  313 (325)
T KOG0649|consen  302 SIAGFSNKLHIL  313 (325)
T ss_pred             Eecccceeeeee
Confidence            666666666655

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.80  E-value=1.5e-16  Score=125.77  Aligned_cols=242  Identities=11%  Similarity=0.064  Sum_probs=146.7

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEe-cCCCeEEEEccC-Ccce--eEEEeeeccceeEEEEecCCCcEEEEeec-CCeEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVA-GSRAVIRIFSPA-FHAC--VRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTLRL   83 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~-~~dg~i~vw~~~-~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~v   83 (291)
                      +.+....++++|++    ++|+++ ..++.|.+|+++ +++.  +.... ..+....++|+| ++++|++++. ++.|.+
T Consensus        33 ~~~~~~~l~~spd~----~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~-~g~~l~v~~~~~~~v~v  106 (330)
T PRK11028         33 VPGQVQPMVISPDK----RHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDH-QGRFLFSASYNANCVSV  106 (330)
T ss_pred             cCCCCccEEECCCC----CEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECC-CCCEEEEEEcCCCeEEE
Confidence            34567788899988    476655 457899999986 3332  22222 233567899999 8887777654 789999


Q ss_pred             EECCCcc-eeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhh-ccccccCCCCccccccCccc
Q psy10348         84 WNIKTDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDAC-AESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        84 wd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  160 (291)
                      |++.+.. ....... ..+.....+++++|+++++++++ .++.|.+||+.+...+... .......             
T Consensus       107 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-------------  172 (330)
T PRK11028        107 SPLDKDGIPVAPIQI-IEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-------------  172 (330)
T ss_pred             EEECCCCCCCCceee-ccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-------------
Confidence            9997432 2111111 12334567889999999886655 4799999999763322110 0000000             


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCCCCccccccCCCceeeeeeecCC----cccEEEEEEE
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGRLEDKELRTNETNVTIINRLNFK----DCEIWFIRFS  233 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~  233 (291)
                                .......+.|+  ++++++... ++.|.+|++...... +       +.+..+...    ...-+...+.
T Consensus       173 ----------~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~-~-------~~~~~~~~~p~~~~~~~~~~~i~  234 (330)
T PRK11028        173 ----------EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGE-I-------ECVQTLDMMPADFSDTRWAADIH  234 (330)
T ss_pred             ----------CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCC-E-------EEEEEEecCCCcCCCCccceeEE
Confidence                      11224567887  667777765 999999999742110 0       112222111    1112334566


Q ss_pred             ecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        234 MDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       234 ~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|++++++++. .++.|.+|++......   ........-......++|+|||++|++
T Consensus       235 ~~pdg~~lyv~~~~~~~I~v~~i~~~~~~---~~~~~~~~~~~~p~~~~~~~dg~~l~v  290 (330)
T PRK11028        235 ITPDGRHLYACDRTASLISVFSVSEDGSV---LSFEGHQPTETQPRGFNIDHSGKYLIA  290 (330)
T ss_pred             ECCCCCEEEEecCCCCeEEEEEEeCCCCe---EEEeEEEeccccCCceEECCCCCEEEE
Confidence            778899999986 4789999999764321   122221111235668999999999874

>KOG1524|consensus

Probab=99.80  E-value=4.5e-18  Score=132.45  Aligned_cols=222  Identities=16%  Similarity=0.243  Sum_probs=151.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEE-ec------CCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKF-HP------QDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~-~~------~~~~~l~s~~~dg~   80 (291)
                      -|.+.+.||.|+...+    .+.+++.+..+.-||+. ......+.-..+.+....+ -+      ...+.|+.++.||.
T Consensus        12 r~~e~vc~v~w~~~ee----i~~~~dDh~~~~~~~~~-~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGk   86 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEE----IYFVSDDHQIFKWSDVS-RDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGR   86 (737)
T ss_pred             ccceeEEeecccccce----EEEeccCceEEEeeccc-chhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCce
Confidence            3567788999998873    55555544444444443 3322222222222221111 11      12356888899999


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      +.+.+- .++....+   ..|.+.+.+-.|+|+|.-|+++++||.|++|. ++|.+..++..                  
T Consensus        87 f~il~k-~~rVE~sv---~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q------------------  143 (737)
T KOG1524|consen   87 FVILNK-SARVERSI---SAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQ------------------  143 (737)
T ss_pred             EEEecc-cchhhhhh---hhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhh------------------
Confidence            999874 35555555   78999999999999999999999999999998 45554444332                  


Q ss_pred             cCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                                ...+|.|++|.   .+.+++.+  +.+.+=.+...            ..+-.+..|.+-|.+++|  ++.
T Consensus       144 ----------~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n------------~k~i~WkAHDGiiL~~~W--~~~  197 (737)
T KOG1524|consen  144 ----------NEESIRCARWAPNSNSIVFCQG--GHISIKPLAAN------------SKIIRWRAHDGLVLSLSW--STQ  197 (737)
T ss_pred             ----------cCceeEEEEECCCCCceEEecC--CeEEEeecccc------------cceeEEeccCcEEEEeec--Ccc
Confidence                      67789999997   34666555  44444444333            226677888887665554  566


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..++++|+.|-..++||-...       ..+....|+.+|++++|.||.-+++
T Consensus       198 s~lI~sgGED~kfKvWD~~G~-------~Lf~S~~~ey~ITSva~npd~~~~v  243 (737)
T KOG1524|consen  198 SNIIASGGEDFRFKIWDAQGA-------NLFTSAAEEYAITSVAFNPEKDYLL  243 (737)
T ss_pred             ccceeecCCceeEEeecccCc-------ccccCChhccceeeeeeccccceee
Confidence            999999999999999998775       4555668889999999999955543

>KOG0771|consensus

Probab=99.80  E-value=2.3e-18  Score=130.03  Aligned_cols=202  Identities=17%  Similarity=0.157  Sum_probs=150.7

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceee
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      .+++|+.++.    .+++|+.||++|||+..+...+.....|...|.++.|+| |+++|++-+.| ..+||+.++|..+.
T Consensus       148 k~vaf~~~gs----~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~-dgk~lasig~d-~~~VW~~~~g~~~a  221 (398)
T KOG0771|consen  148 KVVAFNGDGS----KLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSP-DGKFLASIGAD-SARVWSVNTGAALA  221 (398)
T ss_pred             eEEEEcCCCC----EeeeccccceEEEEecCcchhhhhhHhhcCccccceeCC-CCcEEEEecCC-ceEEEEeccCchhh
Confidence            6789999984    999999999999999877887777888999999999999 99999999999 89999999997766


Q ss_pred             eeccccCCCCceEEEEEccCC---CE--EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         94 IFGGVEGHRDEVLSADFDLLG---TK--IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~~~---~~--l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      .... ...+.....+.|+.++   .+  ++....-+.|+.||+.....-..+.                       ....
T Consensus       222 ~~t~-~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~-----------------------~~~~  277 (398)
T KOG0771|consen  222 RKTP-FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLR-----------------------LRKK  277 (398)
T ss_pred             hcCC-cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccc-----------------------hhhh
Confidence            5521 2344456778888776   33  3333446778888876544211000                       0000


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      ......|++++.+  |++++.|+.||.|.+++..+.+..           ...-+.|...|+.+.|+  |+.+++++-+.
T Consensus       278 ~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~-----------~~vk~aH~~~VT~ltF~--Pdsr~~~svSs  344 (398)
T KOG0771|consen  278 IKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRL-----------QYVKEAHLGFVTGLTFS--PDSRYLASVSS  344 (398)
T ss_pred             hhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeee-----------EeehhhheeeeeeEEEc--CCcCccccccc
Confidence            0123458888887  899999999999999999887542           33334566666666665  56999999999


Q ss_pred             CCcEEEEEcCCC
Q psy10348        247 SGRTYVWDLDVQ  258 (291)
Q Consensus       247 dg~i~vwd~~~~  258 (291)
                      |....|..+.-.
T Consensus       345 ~~~~~v~~l~vd  356 (398)
T KOG0771|consen  345 DNEAAVTKLAVD  356 (398)
T ss_pred             CCceeEEEEeec
Confidence            999999888753

>KOG2110|consensus

Probab=99.80  E-value=1.7e-16  Score=118.17  Aligned_cols=212  Identities=9%  Similarity=0.076  Sum_probs=151.9

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee---eccceeEEEEecCCCcEEEEe--ecCCeEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG---HGHAINELKFHPQDFNLLLSV--SKDHTLRLW   84 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~--~~dg~i~vw   84 (291)
                      ..+|.++.++.+      +|+++-++ .|+|||+.+.+++.++..   +...+.++.+++ .+.++|-=  ...|.|.||
T Consensus        87 pt~IL~VrmNr~------RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~-~n~ylAyp~s~t~GdV~l~  158 (391)
T KOG2110|consen   87 PTSILAVRMNRK------RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNN-ANCYLAYPGSTTSGDVVLF  158 (391)
T ss_pred             CCceEEEEEccc------eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCC-CCceEEecCCCCCceEEEE
Confidence            345666666643      56666654 499999999999888763   334466666665 55577652  335899999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc-EEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS-LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      |..+-+.+..+   ..|++++-+++|+++|.+|||++..|+ |||+.+.+++.+..+....                   
T Consensus       159 d~~nl~~v~~I---~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~-------------------  216 (391)
T KOG2110|consen  159 DTINLQPVNTI---NAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGT-------------------  216 (391)
T ss_pred             EcccceeeeEE---EecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCc-------------------
Confidence            99999999888   799999999999999999999999987 6999999999887765321                   


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC-------------------------CCceee
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN-------------------------ETNVTI  216 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------------------------~~~~~~  216 (291)
                             ....|.+++|+  +++|++.+..++|++|.+...........                         ....+.
T Consensus       217 -------~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~  289 (391)
T KOG2110|consen  217 -------YPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRK  289 (391)
T ss_pred             -------eeeEEEEEEECCCCCeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccc
Confidence                   24558899998  77999999999999999865542211100                         011111


Q ss_pred             eeeecCCcccE-EEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        217 INRLNFKDCEI-WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       217 ~~~~~~~~~~i-~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      ....+...... ....+...+....+.+++.||.++.|.+...
T Consensus       290 FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~  332 (391)
T KOG2110|consen  290 FATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPK  332 (391)
T ss_pred             eeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCC
Confidence            22222222222 2444555567899999999999999998764

>KOG1009|consensus

Probab=99.79  E-value=1.9e-18  Score=129.76  Aligned_cols=210  Identities=16%  Similarity=0.252  Sum_probs=151.6

Q ss_pred             ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEE
Q psy10348         56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW  129 (291)
Q Consensus        56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~  129 (291)
                      ..+|..+.|.+.+...++||+.|..|++|-++.+.      .+..+..+..|...|+++.|+|+|..|++|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            46899999999555599999999999999876432      344445668999999999999999999999999999999


Q ss_pred             eccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc
Q psy10348        130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL  207 (291)
Q Consensus       130 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~  207 (291)
                      ....-...          +...  ................+|...|..++|.  ++++++++.|+.+++||+..+..   
T Consensus        93 k~~~~~~~----------~~d~--e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l---  157 (434)
T KOG1009|consen   93 KQGDVRIF----------DADT--EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQL---  157 (434)
T ss_pred             EecCcCCc----------cccc--hhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEecccee---
Confidence            87641110          0000  1111122233344556699999999998  77999999999999999999854   


Q ss_pred             ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee-----------------EEEec
Q psy10348        208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF-----------------QILSH  270 (291)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----------------~~~~~  270 (291)
                               +..+..|...+..++|.  |-++++++-+.|...+.+.+.....+....                 .++..
T Consensus       158 ---------~~~~~dh~~yvqgvawD--pl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhD  226 (434)
T KOG1009|consen  158 ---------LAILDDHEHYVQGVAWD--PLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHD  226 (434)
T ss_pred             ---------Eeeccccccccceeecc--hhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeec
Confidence                     77788888877776655  559999999999888888776543221111                 11111


Q ss_pred             cccccceeeeEEccCCceeeC
Q psy10348        271 PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       271 ~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..-..-...++|+|||..|++
T Consensus       227 eTlksFFrRlsfTPdG~llvt  247 (434)
T KOG1009|consen  227 ETLKSFFRRLSFTPDGSLLVT  247 (434)
T ss_pred             CchhhhhhhcccCCCCcEEEc
Confidence            111224568999999999874

>KOG0650|consensus

Probab=99.79  E-value=5.1e-18  Score=133.60  Aligned_cols=210  Identities=14%  Similarity=0.171  Sum_probs=164.1

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCC---CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSR---AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ..+.|...|..+.|+-.|    .||++...+   ..|.|.++...+...-|+...+.|.++.|+| ...+|++++. ..|
T Consensus       516 ~~I~~~k~i~~vtWHrkG----DYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHP-s~p~lfVaTq-~~v  589 (733)
T KOG0650|consen  516 IVIKHPKSIRQVTWHRKG----DYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHP-SKPYLFVATQ-RSV  589 (733)
T ss_pred             EEEecCCccceeeeecCC----ceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecC-CCceEEEEec-cce
Confidence            567889999999999999    599997654   5788999887766666665678899999999 7677777765 579


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ++||+..+..++.+   ......|..++.+|.|..|+.++.|+.+..+|+.-....                        
T Consensus       590 RiYdL~kqelvKkL---~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskP------------------------  642 (733)
T KOG0650|consen  590 RIYDLSKQELVKKL---LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKP------------------------  642 (733)
T ss_pred             EEEehhHHHHHHHH---hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcch------------------------
Confidence            99999988877777   566788999999999999999999999999999765422                        


Q ss_pred             CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc--EEEEEEEecCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE--IWFIRFSMDYW  237 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~  237 (291)
                         +.++..|...+++|+|+  -.++++|+.||++.||.-.-.....   .....-++..+.+|...  .-.+...|+|.
T Consensus       643 ---yk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~---qnpliVPlK~L~gH~~~~~~gVLd~~wHP~  716 (733)
T KOG0650|consen  643 ---YKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLL---QNPLIVPLKRLRGHEKTNDLGVLDTIWHPR  716 (733)
T ss_pred             ---hHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhh---cCCceEeeeeccCceeecccceEeecccCC
Confidence               22233499999999999  4589999999999998643222110   01112446677777543  44667778899


Q ss_pred             CcEEEEEcCCCcEEEE
Q psy10348        238 QKILAVGNQSGRTYVW  253 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vw  253 (291)
                      ..+|++++.||+|++|
T Consensus       717 qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  717 QPWLFSAGADGTIRLF  732 (733)
T ss_pred             CceEEecCCCceEEee
Confidence            9999999999999998

>KOG1310|consensus

Probab=99.79  E-value=1.6e-17  Score=129.81  Aligned_cols=228  Identities=14%  Similarity=0.184  Sum_probs=156.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecC-CCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQ-DFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+-|+|+.|+.+|.    +|++|+.|-.+.|||.-..+++..+. +|...|.++.|-|. +..++++|..|..|+++|
T Consensus        48 GH~GCVN~LeWn~dG~----lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd  123 (758)
T KOG1310|consen   48 GHTGCVNCLEWNADGE----LLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD  123 (758)
T ss_pred             cccceecceeecCCCC----EEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence            5889999999999995    99999999999999998777777775 89999999999983 446889999999999999


Q ss_pred             CCCc----------ceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348         86 IKTD----------ICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        86 ~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~  154 (291)
                      +...          .....+   ..|...|..++-.|++ +.+.++++||+++-+|++....-..         +.... 
T Consensus       124 l~~~~~~~~d~~~~~~~~~~---~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p---------~~~~~-  190 (758)
T KOG1310|consen  124 LDSSKEGGMDHGMEETTRCW---SCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNP---------DEDCP-  190 (758)
T ss_pred             cccccccccccCccchhhhh---hhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCc---------ccccc-
Confidence            9742          122233   6788999999999998 6899999999999999987542111         00000 


Q ss_pred             ccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccc------cccCCCceeeeeeecC-Cc
Q psy10348        155 FDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKE------LRTNETNVTIINRLNF-KD  224 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~------~~~~~~~~~~~~~~~~-~~  224 (291)
                              ..........-...|+..+   +.+|++|+.|-..++||.+......      ....+....++..|.. |-
T Consensus       191 --------~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hl  262 (758)
T KOG1310|consen  191 --------SILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHL  262 (758)
T ss_pred             --------HHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccc
Confidence                    0000000011234566666   6699999999999999954332210      0011111112222211 11


Q ss_pred             --------ccEE-EEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        225 --------CEIW-FIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       225 --------~~i~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                              ..+. +.-+.++|+|.-|++.-..-.|+++|+...+.
T Consensus       263 kn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  263 KNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKS  307 (758)
T ss_pred             cCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCC
Confidence                    1121 23345678888877776666899999998764

>KOG0642|consensus

Probab=99.79  E-value=4.6e-18  Score=132.80  Aligned_cols=213  Identities=21%  Similarity=0.250  Sum_probs=150.1

Q ss_pred             EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-----c---ceeeeeccccCCCCceEEEEEccCCCEEEEEec
Q psy10348         51 HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-----D---ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM  122 (291)
Q Consensus        51 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  122 (291)
                      ++..|.+.|+.++|+| ....|++++.||.+++|+++.     .   +++..|   .+|.++|.|+++.+++..+++|+.
T Consensus       289 tl~s~~d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tf---raH~gPVl~v~v~~n~~~~ysgg~  364 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTF---RAHEGPVLCVVVPSNGEHCYSGGI  364 (577)
T ss_pred             eeecchhhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEE---ecccCceEEEEecCCceEEEeecc
Confidence            5567889999999999 778999999999999999932     1   344455   899999999999999999999999


Q ss_pred             CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCC
Q psy10348        123 DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       123 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~  200 (291)
                      ||+|+.|++....-           |.....+       ......+.+|.+.|..++++  .+.|++++.||+++.|+..
T Consensus       365 Dg~I~~w~~p~n~d-----------p~ds~dp-------~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~  426 (577)
T KOG0642|consen  365 DGTIRCWNLPPNQD-----------PDDSYDP-------SVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT  426 (577)
T ss_pred             CceeeeeccCCCCC-----------cccccCc-------chhccceeccccceeeeeecccccceeeecCCceEEeeccC
Confidence            99999998762211           1100000       00122345799999999998  6689999999999999986


Q ss_pred             CCCccccccCCC--------------------------------ceeeeeeecCC--cc---cEEEEEEEecCCCcEEEE
Q psy10348        201 RLEDKELRTNET--------------------------------NVTIINRLNFK--DC---EIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       201 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~--~~---~i~~~~~~~~~~~~~l~~  243 (291)
                      ......+.....                                ....+..+...  ..   .-....+...|.+.+.++
T Consensus       427 ~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~  506 (577)
T KOG0642|consen  427 EESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFT  506 (577)
T ss_pred             CcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEe
Confidence            655411100000                                00000111100  00   011233445577899999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +..|+.|+++|..+++.+      .....|-..++++++.|+|-+|++
T Consensus       507 ~hed~~Ir~~dn~~~~~l------~s~~a~~~svtslai~~ng~~l~s  548 (577)
T KOG0642|consen  507 AHEDRSIRFFDNKTGKIL------HSMVAHKDSVTSLAIDPNGPYLMS  548 (577)
T ss_pred             cccCCceecccccccccc------hheeeccceecceeecCCCceEEe
Confidence            999999999999998643      233356679999999999999874

>KOG2139|consensus

Probab=99.78  E-value=5.4e-17  Score=120.64  Aligned_cols=231  Identities=15%  Similarity=0.281  Sum_probs=155.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .+-.+..++|++...    .+|++..|-.|++||-.. .....++ .....|++++|-|.....|+.|+..| |.+|...
T Consensus        97 s~~dlr~~aWhqH~~----~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s  170 (445)
T KOG2139|consen   97 SEIDLRGVAWHQHII----AFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDS  170 (445)
T ss_pred             hhcceeeEeechhhh----hhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcC
Confidence            355678899999884    899999999999999776 4444554 33568999999998888899988765 8999764


Q ss_pred             Cc----ce--------eeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348         88 TD----IC--------IAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        88 ~~----~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~  154 (291)
                      ..    +.        ...++ ..+| .+|++++|++||..+++++. |..|.|||..++..+.....            
T Consensus       171 ~tln~~r~~~~~s~~~~qvl~-~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~------------  236 (445)
T KOG2139|consen  171 RTLNANRNIRMMSTHHLQVLQ-DPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPK------------  236 (445)
T ss_pred             cccccccccccccccchhhee-CCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccccc------------
Confidence            21    11        11111 1344 78999999999999999886 78899999999886543311            


Q ss_pred             ccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCC-CCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348        155 FDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPG-RLEDKELRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                                      ..+.++-+.|+  +++|++++.|+..++|... +...            .. +....+.+.  .
T Consensus       237 ----------------glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~------------er-w~lgsgrvq--t  285 (445)
T KOG2139|consen  237 ----------------GLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTK------------ER-WILGSGRVQ--T  285 (445)
T ss_pred             ----------------CCCceeeEEEcCCCCEEEEecccceeeeehhccccee------------cc-eeccCCcee--e
Confidence                            45568889998  7899999999999999543 3221            11 111222343  3


Q ss_pred             EEecCCCcEEEEEcCCCcEEEEEcCCCCC--Cc-------ceeEEE---------eccccccceeeeEEccCCceeeC
Q psy10348        232 FSMDYWQKILAVGNQSGRTYVWDLDVQDP--SS-------IKFQIL---------SHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       232 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~-------~~~~~~---------~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+++|+|.+|+.... |.-++|.+.-...  ..       ......         ......+++.+++|.|.|.+||+
T Consensus       286 acWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav  362 (445)
T KOG2139|consen  286 ACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAV  362 (445)
T ss_pred             eeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEE
Confidence            456677987765543 3345555542210  00       000000         01123468899999999999984

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.78  E-value=6.5e-16  Score=126.37  Aligned_cols=220  Identities=25%  Similarity=0.386  Sum_probs=161.5

Q ss_pred             eeEEEEe-eeccCCCCCEEEEecC-CCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeec-CCeEEEEECC
Q psy10348         12 NFYTCAW-SMDLESGRPLLAVAGS-RAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTLRLWNIK   87 (291)
Q Consensus        12 ~i~~~~~-s~~~~~~~~~l~~~~~-dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~   87 (291)
                      .+..+.+ ++++.   .+++..+. |+.+.+|+... ......+..|...|..++|+| ++..+++++. |+.+++|++.
T Consensus       111 ~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  186 (466)
T COG2319         111 SVSKLALSSPDGN---SILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSP-DGKLLASGSSLDGTIKLWDLR  186 (466)
T ss_pred             ceeeEEEECCCcc---eEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECC-CCCEEEecCCCCCceEEEEcC
Confidence            5666666 55552   24555444 99999999987 788888899999999999999 7778888875 9999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .+..+..+   .+|...|.+++|+|++. .+++++.|+.+++||...+.....                           
T Consensus       187 ~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~---------------------------  236 (466)
T COG2319         187 TGKPLSTL---AGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS---------------------------  236 (466)
T ss_pred             CCceEEee---ccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEee---------------------------
Confidence            87888877   67999999999999998 555558999999998875554331                           


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                      ....|.... ...|.  +.++++++.|+.+++|+.......           +..+..|...+..+.  ++|++..++++
T Consensus       237 ~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~v~~~~--~~~~~~~~~~~  302 (466)
T COG2319         237 TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSL-----------LRTLSGHSSSVLSVA--FSPDGKLLASG  302 (466)
T ss_pred             ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcE-----------EEEEecCCccEEEEE--ECCCCCEEEEe
Confidence            112354443 22555  568889999999999999876531           222245566666664  44568888889


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      +.|+.+.+|+..+....    .......|...+..+.|.
T Consensus       303 ~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  337 (466)
T COG2319         303 SSDGTVRLWDLETGKLL----SSLTLKGHEGPVSSLSFS  337 (466)
T ss_pred             eCCCcEEEEEcCCCceE----EEeeecccCCceEEEEEC
Confidence            88899999988877532    111123555678888883

>KOG1310|consensus

Probab=99.77  E-value=4.4e-18  Score=132.88  Aligned_cols=184  Identities=20%  Similarity=0.193  Sum_probs=129.8

Q ss_pred             eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcE
Q psy10348         49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSL  126 (291)
Q Consensus        49 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i  126 (291)
                      .+.+.+|++.|+++.|+. +|.+|++|+.|-.+.|||.-..+.+..+.  .+|...|.+++|-|.  .+.+++|..|..|
T Consensus        43 E~eL~GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~--TgHtaNIFsvKFvP~tnnriv~sgAgDk~i  119 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSIS--TGHTANIFSVKFVPYTNNRIVLSGAGDKLI  119 (758)
T ss_pred             hhhhccccceecceeecC-CCCEEeecCCcceEEeecchhcceeeeee--cccccceeEEeeeccCCCeEEEeccCcceE
Confidence            456789999999999999 99999999999999999998888887775  699999999999985  5689999999999


Q ss_pred             EEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCC
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      +++|+...+.-..     .-.             ..........|...|..++-.   ++.+.++++||+|+-+|++...
T Consensus       120 ~lfdl~~~~~~~~-----d~~-------------~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph  181 (758)
T KOG1310|consen  120 KLFDLDSSKEGGM-----DHG-------------MEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPH  181 (758)
T ss_pred             EEEeccccccccc-----ccC-------------ccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCc
Confidence            9999985331100     000             000111122377777777775   4789999999999999998753


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      ..  .+.......+..+...--...++.+++. +..+||+|+.|-..++||.+
T Consensus       182 ~c--~p~~~~~~~l~ny~~~lielk~ltisp~-rp~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  182 VC--NPDEDCPSILVNYNPQLIELKCLTISPS-RPYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             cC--CccccccHHHHHhchhhheeeeeeecCC-CCceEEecCCCchhhhhhhh
Confidence            21  0000000111222222222334445543 35789999999999999943

>KOG0290|consensus

Probab=99.77  E-value=4.8e-17  Score=117.49  Aligned_cols=202  Identities=11%  Similarity=0.188  Sum_probs=149.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ++..++++..|+.-..   +++.+++-|-+..|||++++.   ...++-+|..+|..++|....-+.||+.+.||.|+++
T Consensus       148 ~~~aPlTSFDWne~dp---~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmF  224 (364)
T KOG0290|consen  148 EFCAPLTSFDWNEVDP---NLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMF  224 (364)
T ss_pred             ccCCcccccccccCCc---ceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEE
Confidence            3457888999987665   699999999999999999873   3566779999999999998666799999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      |++..+.-..+.+-.....+..-++|+++.. ++++-.. ...|.+.|++....                          
T Consensus       225 DLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~t--------------------------  278 (364)
T KOG0290|consen  225 DLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCT--------------------------  278 (364)
T ss_pred             EecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCc--------------------------
Confidence            9997765555543233367888899998654 6666555 45799999987542                          


Q ss_pred             cccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                       .+..+.+|.+.|+.++|.   ...|++++.|..+.+||+.+.-...      ...++..+. ....|+-+.|+.. .+.
T Consensus       279 -pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~------~~dPilay~-a~~EVNqi~Ws~~-~~D  349 (364)
T KOG0290|consen  279 -PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPREN------GEDPILAYT-AGGEVNQIQWSSS-QPD  349 (364)
T ss_pred             -ceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccC------CCCchhhhh-ccceeeeeeeccc-CCC
Confidence             223345699999999997   6699999999999999997653310      001122233 3345666667643 367


Q ss_pred             EEEEEcCC
Q psy10348        240 ILAVGNQS  247 (291)
Q Consensus       240 ~l~~~~~d  247 (291)
                      +++++...
T Consensus       350 wiai~~~k  357 (364)
T KOG0290|consen  350 WIAICFGK  357 (364)
T ss_pred             EEEEEecC
Confidence            88887654

>KOG1188|consensus

Probab=99.77  E-value=1.7e-17  Score=122.18  Aligned_cols=174  Identities=13%  Similarity=0.204  Sum_probs=133.1

Q ss_pred             cEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      ..+|++..+|.|++||..+++.+..+   +++...+..+.|..  ....+.+++.||+|++||+|.......+..     
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~f---k~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~-----  112 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEF---KGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISW-----  112 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhhee---cCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheec-----
Confidence            57889999999999999999999988   78888888899876  456899999999999999999876655432     


Q ss_pred             CCCccccccCccccCccccccccc-CcceeEEEEc--CCEEEEecC----CCeEEEecCCCCCccccccCCCceeeeeee
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIH-RNYVDCVRWL--GDFVLSKSC----ENCIICWKPGRLEDKELRTNETNVTIINRL  220 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  220 (291)
                                           ..+ ..+..+++.+  ++.+++|..    +..|.+||.|..+..          .-.-.
T Consensus       113 ---------------------~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~----------l~~~~  161 (376)
T KOG1188|consen  113 ---------------------TQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL----------LRQLN  161 (376)
T ss_pred             ---------------------cCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccch----------hhhhh
Confidence                                 112 2445566664  567777754    778999999987652          12334


Q ss_pred             cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       221 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                      ..|...|+.++|.|+ +.++|++|+.||-|.|||+.....-.   .++....+.+.|..+.|..++
T Consensus       162 eSH~DDVT~lrFHP~-~pnlLlSGSvDGLvnlfD~~~d~EeD---aL~~viN~~sSI~~igw~~~~  223 (376)
T KOG1188|consen  162 ESHNDDVTQLRFHPS-DPNLLLSGSVDGLVNLFDTKKDNEED---ALLHVINHGSSIHLIGWLSKK  223 (376)
T ss_pred             hhccCcceeEEecCC-CCCeEEeecccceEEeeecCCCcchh---hHHHhhcccceeeeeeeecCC
Confidence            568889999998874 47899999999999999998764322   222333566789999998887

>KOG2394|consensus

Probab=99.76  E-value=3e-17  Score=127.81  Aligned_cols=139  Identities=19%  Similarity=0.321  Sum_probs=113.8

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--------------cce--------------eEEEeeecccee
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--------------HAC--------------VRHFYGHGHAIN   60 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--------------~~~--------------~~~~~~~~~~v~   60 (291)
                      ....++|+.|-|...   ..++++-.+|.+++||.+-              +..              +..+.--++.|.
T Consensus       218 ~ktsvT~ikWvpg~~---~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in  294 (636)
T KOG2394|consen  218 NKSSVTCIKWVPGSD---SLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSIN  294 (636)
T ss_pred             cccceEEEEEEeCCC---ceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccccc
Confidence            347899999999876   6888888999999997531              111              111222246889


Q ss_pred             EEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhh
Q psy10348         61 ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus        61 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~  140 (291)
                      ..+|+| |+++||+.+.||.++|+|..+.+.+..+   +.--+...|++|+|||++|++|++|.-|.||.+...+.+..-
T Consensus       295 ~f~FS~-DG~~LA~VSqDGfLRvF~fdt~eLlg~m---kSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARG  370 (636)
T KOG2394|consen  295 EFAFSP-DGKYLATVSQDGFLRIFDFDTQELLGVM---KSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARG  370 (636)
T ss_pred             ceeEcC-CCceEEEEecCceEEEeeccHHHHHHHH---HhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEec
Confidence            999999 9999999999999999999988777766   455678999999999999999999999999999988866543


Q ss_pred             ccccccCCCCccccccCccccCcccccccccCcceeEEEEcC
Q psy10348        141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG  182 (291)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  182 (291)
                                                  .+|+.+|+.|+|+.
T Consensus       371 ----------------------------qGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  371 ----------------------------QGHKSWVSVVAFDP  384 (636)
T ss_pred             ----------------------------cccccceeeEeecc
Confidence                                        46999999999985

>KOG2110|consensus

Probab=99.75  E-value=2.3e-15  Score=112.26  Aligned_cols=187  Identities=9%  Similarity=0.154  Sum_probs=148.2

Q ss_pred             EEEEecCC--CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         28 LLAVAGSR--AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        28 ~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      ++|..+.+  +.+++.+.+.+..+..+. ...+|.++.++.   +.|+++-.+ .|+|||+++-+.+..+.....+...+
T Consensus        58 LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~IL~VrmNr---~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl  132 (391)
T KOG2110|consen   58 LVAIVSIKQPRKLKVVHFKKKTTICEIF-FPTSILAVRMNR---KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGL  132 (391)
T ss_pred             eeEEEecCCCceEEEEEcccCceEEEEe-cCCceEEEEEcc---ceEEEEEcc-cEEEEecccceeehhhhccCCCccce
Confidence            44444433  458888888777776665 457899999986   466666554 49999999999998886655677778


Q ss_pred             EEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348        106 LSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--  181 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  181 (291)
                      .++..++.+.+++.=+  ..|.|.+||+.+-+....+                            .+|++.+-+++|+  
T Consensus       133 ~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I----------------------------~aH~~~lAalafs~~  184 (391)
T KOG2110|consen  133 CALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTI----------------------------NAHKGPLAALAFSPD  184 (391)
T ss_pred             EeeccCCCCceEEecCCCCCceEEEEEcccceeeeEE----------------------------EecCCceeEEEECCC
Confidence            8888887777887633  3789999999888765544                            3599999999998  


Q ss_pred             CCEEEEecCCCe-EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        182 GDFVLSKSCENC-IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       182 ~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      |.+|++++..|+ |||+.+.+++.            +.+|......+....++++|++++|++.++.++|.+|.+....
T Consensus       185 G~llATASeKGTVIRVf~v~~G~k------------l~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  185 GTLLATASEKGTVIRVFSVPEGQK------------LYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS  251 (391)
T ss_pred             CCEEEEeccCceEEEEEEcCCccE------------eeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence            889999999885 78999988854            7778777777888888899999999999999999999998643

>KOG1538|consensus

Probab=99.75  E-value=4.3e-16  Score=124.82  Aligned_cols=198  Identities=14%  Similarity=0.214  Sum_probs=143.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc------------------------------
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH------------------------------   57 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~------------------------------   57 (291)
                      .|.+.|+|++|+.++    +++|+|+.|..|.+|+..-...++ + .|.+                              
T Consensus        51 gHKDtVycVAys~dG----krFASG~aDK~VI~W~~klEG~Lk-Y-SH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK  124 (1081)
T KOG1538|consen   51 GHKDTVYCVAYAKDG----KRFASGSADKSVIIWTSKLEGILK-Y-SHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQK  124 (1081)
T ss_pred             cccceEEEEEEccCC----ceeccCCCceeEEEecccccceee-e-ccCCeeeEeecCchHHHhhhcchhhccccChhhh
Confidence            488999999999999    599999999999999864221111 1 2333                              


Q ss_pred             ---------ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC-----CEEEEEecC
Q psy10348         58 ---------AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG-----TKIMSCGMD  123 (291)
Q Consensus        58 ---------~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~l~~~~~d  123 (291)
                               .|.+.+|.. ||.+|+.|-.||+|.+-+- ++++...+....+.+.+|.+++|+|+.     ..+++....
T Consensus       125 ~V~K~kss~R~~~CsWtn-DGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~  202 (1081)
T KOG1538|consen  125 SVSKHKSSSRIICCSWTN-DGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWG  202 (1081)
T ss_pred             hHHhhhhheeEEEeeecC-CCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEecc
Confidence                     445555665 8899999999999999874 355555555446788999999999974     378888888


Q ss_pred             CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348        124 HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       124 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~  201 (291)
                      .++.+|.+.....-..-  ...                           -...|+.+.  |.+++.|+.|+.+++|....
T Consensus       203 qTLSFy~LsG~~Igk~r--~L~---------------------------FdP~CisYf~NGEy~LiGGsdk~L~~fTR~G  253 (1081)
T KOG1538|consen  203 QTLSFYQLSGKQIGKDR--ALN---------------------------FDPCCISYFTNGEYILLGGSDKQLSLFTRDG  253 (1081)
T ss_pred             ceeEEEEecceeecccc--cCC---------------------------CCchhheeccCCcEEEEccCCCceEEEeecC
Confidence            89998887654321110  111                           112356664  88999999999999997433


Q ss_pred             CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        202 LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                                   -.+.+.......||.+...  |++++++.|+.||+|--|++..
T Consensus       254 -------------vrLGTvg~~D~WIWtV~~~--PNsQ~v~~GCqDGTiACyNl~f  294 (1081)
T KOG1538|consen  254 -------------VRLGTVGEQDSWIWTVQAK--PNSQYVVVGCQDGTIACYNLIF  294 (1081)
T ss_pred             -------------eEEeeccccceeEEEEEEc--cCCceEEEEEccCeeehhhhHH
Confidence                         2255555556667766655  6699999999999999999864

>KOG1523|consensus

Probab=99.74  E-value=1.5e-16  Score=116.40  Aligned_cols=201  Identities=14%  Similarity=0.146  Sum_probs=147.1

Q ss_pred             EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         51 HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        51 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      .+.--..+|+|.+|++ +...+|.+..+..|.||.....+.-.....+..|...|++++|+|..+.|++++.|..-++|.
T Consensus         5 ~~~~~~~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~   83 (361)
T KOG1523|consen    5 VFHRLLEPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT   83 (361)
T ss_pred             EeeeccCceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence            3433458999999999 999999999999999999887664555555689999999999999999999999999999999


Q ss_pred             cc-CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc
Q psy10348        131 LT-KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL  207 (291)
Q Consensus       131 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~  207 (291)
                      .. .++-..++                          .+..++..++++.|+  ++.|++|+....|.+|-+......-+
T Consensus        84 ~~~~~~Wkptl--------------------------vLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWV  137 (361)
T KOG1523|consen   84 QPSGGTWKPTL--------------------------VLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWV  137 (361)
T ss_pred             cCCCCeeccce--------------------------eEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceeh
Confidence            84 33322221                          112378889999998  78999999999999998876544311


Q ss_pred             ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC--------------CCcceeEEEecccc
Q psy10348        208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD--------------PSSIKFQILSHPRC  273 (291)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--------------~~~~~~~~~~~~~~  273 (291)
                      ..+        .-......  +.+++++|++-+|++|+.|++.||+...-..              +...+..  +....
T Consensus       138 sKh--------ikkPirSt--v~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~--E~~~~  205 (361)
T KOG1523|consen  138 SKH--------IKKPIRST--VTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMS--EASSS  205 (361)
T ss_pred             hhh--------hCCccccc--eeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHH--hhccC
Confidence            111        11112233  4456677889999999999999999864211              0001111  11134


Q ss_pred             ccceeeeEEccCCceee
Q psy10348        274 MSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~  290 (291)
                      .+.|..+.|+|+|..|+
T Consensus       206 ggwvh~v~fs~sG~~la  222 (361)
T KOG1523|consen  206 GGWVHGVLFSPSGNRLA  222 (361)
T ss_pred             CCceeeeEeCCCCCEee
Confidence            57899999999999886

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=3.7e-16  Score=127.29  Aligned_cols=217  Identities=14%  Similarity=0.048  Sum_probs=137.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCC---CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEe-ecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSR---AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV-SKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~i~v   83 (291)
                      .+...+.+.+|||+++    .|+..+.+   ..|++||+.+++... +....+....++|+| +++.|+.+ +.+|.+.|
T Consensus       201 ~~~~~v~~p~wSPDG~----~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~~g~~~~~~wSP-DG~~La~~~~~~g~~~I  274 (429)
T PRK01742        201 RSSQPLMSPAWSPDGS----KLAYVSFENKKSQLVVHDLRSGARKV-VASFRGHNGAPAFSP-DGSRLAFASSKDGVLNI  274 (429)
T ss_pred             cCCCccccceEcCCCC----EEEEEEecCCCcEEEEEeCCCCceEE-EecCCCccCceeECC-CCCEEEEEEecCCcEEE
Confidence            3466789999999995    77776543   479999998875422 222223345789999 88877765 46776555


Q ss_pred             E--ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         84 W--NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        84 w--d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      |  |+.++.. ..+   ..+...+....|+|+|+.|+.++ .+|...+|++..........                   
T Consensus       275 y~~d~~~~~~-~~l---t~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-------------------  331 (429)
T PRK01742        275 YVMGANGGTP-SQL---TSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-------------------  331 (429)
T ss_pred             EEEECCCCCe-Eee---ccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-------------------
Confidence            5  6665554 334   45667788999999999877655 57889999876432111100                   


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                               .+..  ....|+  |++|+..+.++ +.+||+.++...          .+.  ....  .  ...+++|||
T Consensus       332 ---------~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~----------~lt--~~~~--~--~~~~~sPdG  383 (429)
T PRK01742        332 ---------GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTE----------VLS--STFL--D--ESPSISPNG  383 (429)
T ss_pred             ---------cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeE----------Eec--CCCC--C--CCceECCCC
Confidence                     0111  224455  67777776665 555898776432          111  0111  1  124567889


Q ss_pred             cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ++|+.++.+|.+.+|++.....  .....+  ..|.+.+...+|||-
T Consensus       384 ~~i~~~s~~g~~~~l~~~~~~G--~~~~~l--~~~~g~~~~p~wsp~  426 (429)
T PRK01742        384 IMIIYSSTQGLGKVLQLVSADG--RFKARL--PGSDGQVKFPAWSPY  426 (429)
T ss_pred             CEEEEEEcCCCceEEEEEECCC--CceEEc--cCCCCCCCCcccCCC
Confidence            9999999999888888643211  112333  356678899999985

>KOG1272|consensus

Probab=99.73  E-value=3.7e-17  Score=125.15  Aligned_cols=215  Identities=10%  Similarity=0.132  Sum_probs=165.8

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceee
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      +.+.++.+|    ..|+.|+..|.|-.+|..++++...+.. ...|..+.|.. +..++|++ ....+.|||-. |.++.
T Consensus       133 Y~~~ytrnG----rhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LH-neq~~AVA-QK~y~yvYD~~-GtElH  204 (545)
T KOG1272|consen  133 YHLDYTRNG----RHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLH-NEQFFAVA-QKKYVYVYDNN-GTELH  204 (545)
T ss_pred             eeeeecCCc----cEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhc-chHHHHhh-hhceEEEecCC-CcEEe
Confidence            344555555    7999999999999999999998888864 46799999988 76777776 45789999954 88888


Q ss_pred             eeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         94 IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                      .+   + ....|..+.|-|..-+|++++..|.++.-|+.+|+.+..+..                            ..+
T Consensus       205 Cl---k-~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t----------------------------~~G  252 (545)
T KOG1272|consen  205 CL---K-RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRT----------------------------GAG  252 (545)
T ss_pred             eh---h-hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHc----------------------------cCC
Confidence            87   3 346788999999998999999999999999999999887653                            222


Q ss_pred             ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEE
Q psy10348        174 YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTY  251 (291)
Q Consensus       174 ~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~  251 (291)
                      .+..+.-+  ...+-+|...|+|.+|...+.+.            +..+..|.+++..+++.  ++|+|+|+.+.|..++
T Consensus       253 ~~~vm~qNP~NaVih~GhsnGtVSlWSP~skeP------------LvKiLcH~g~V~siAv~--~~G~YMaTtG~Dr~~k  318 (545)
T KOG1272|consen  253 RTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEP------------LVKILCHRGPVSSIAVD--RGGRYMATTGLDRKVK  318 (545)
T ss_pred             ccchhhcCCccceEEEcCCCceEEecCCCCcch------------HHHHHhcCCCcceEEEC--CCCcEEeeccccccee
Confidence            33333333  44778899999999999988754            66777788888876655  6699999999999999


Q ss_pred             EEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        252 VWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       252 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      |||+++...+    ..+..   .-+...++||..|-+-
T Consensus       319 IWDlR~~~ql----~t~~t---p~~a~~ls~SqkglLA  349 (545)
T KOG1272|consen  319 IWDLRNFYQL----HTYRT---PHPASNLSLSQKGLLA  349 (545)
T ss_pred             Eeeecccccc----ceeec---CCCcccccccccccee
Confidence            9999987532    22221   1256667888776543

>KOG1963|consensus

Probab=99.72  E-value=1e-15  Score=125.76  Aligned_cols=249  Identities=16%  Similarity=0.251  Sum_probs=159.1

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC--cEEEEeecCCeEEEEECCCcceee
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF--NLLLSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      -.||+|.    ++++... +..|.||...+++++..+.+|..+++.+.+.|...  .++++++.||.|++||...+..++
T Consensus        22 avfSnD~----k~l~~~~-~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llk   96 (792)
T KOG1963|consen   22 AVFSNDA----KFLFLCT-GNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLK   96 (792)
T ss_pred             cccccCC----cEEEEee-CCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEE
Confidence            3567776    4666554 46899999999999999999999999999988544  467799999999999999998888


Q ss_pred             eeccccCCCCceEEEEEcc--------------CCCEEEEEec--CCcEEEEeccC-----chhhhhh--ccccccCCCC
Q psy10348         94 IFGGVEGHRDEVLSADFDL--------------LGTKIMSCGM--DHSLKLWDLTK-----PEIKDAC--AESYTFNPAR  150 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~--------------~~~~l~~~~~--d~~i~v~d~~~-----~~~~~~~--~~~~~~~~~~  150 (291)
                      .+.    -..++..+.+.|              +-..+.+.+.  -+.++-+.+.+     +......  ...+.+++.+
T Consensus        97 t~~----~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~g  172 (792)
T KOG1963|consen   97 TFD----NNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSG  172 (792)
T ss_pred             EEe----cCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCc
Confidence            773    223333333311              1111111111  12222222211     1111111  2333444443


Q ss_pred             ccccccCc---------c--ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeee
Q psy10348        151 STRPFDTQ---------K--EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       151 ~~~~~~~~---------~--~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      ....+...         .  ...........|.-.+++.+++  +++++++..||.|.+|.--..+..        ....
T Consensus       173 e~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~--------~~t~  244 (792)
T KOG1963|consen  173 EFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDD--------SETC  244 (792)
T ss_pred             eEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccc--------cccc
Confidence            32211110         0  1111112223466668888888  889999999999999964331110        0225


Q ss_pred             eeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        218 NRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..++.|...+.++.|+.+  |.+|++|+..|.+-+|.+.++++  +.+.     +-.++|..+.+|||+.+.+
T Consensus       245 t~lHWH~~~V~~L~fS~~--G~~LlSGG~E~VLv~Wq~~T~~k--qfLP-----RLgs~I~~i~vS~ds~~~s  308 (792)
T KOG1963|consen  245 TLLHWHHDEVNSLSFSSD--GAYLLSGGREGVLVLWQLETGKK--QFLP-----RLGSPILHIVVSPDSDLYS  308 (792)
T ss_pred             eEEEecccccceeEEecC--CceEeecccceEEEEEeecCCCc--cccc-----ccCCeeEEEEEcCCCCeEE
Confidence            677788888888777755  99999999999999999999873  2222     3457999999999998653

>KOG1587|consensus

Probab=99.72  E-value=1.2e-15  Score=124.27  Aligned_cols=211  Identities=15%  Similarity=0.124  Sum_probs=149.8

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce------eEEEe------eeccceeEEEEecCCCcEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC------VRHFY------GHGHAINELKFHPQDFNLL   72 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~------~~~~~------~~~~~v~~~~~~~~~~~~l   72 (291)
                      ....|.+++..+.|-.+..+  .-+++++.||.|..|+++.-..      .....      .....+++++|.+.+...+
T Consensus       286 ~~~sh~~~v~~vvW~~~~~~--~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~F  363 (555)
T KOG1587|consen  286 LEVSHSEPVTAVVWLQNEHN--TEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHF  363 (555)
T ss_pred             ccccCCcCeEEEEEeccCCC--CceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceE
Confidence            45578999999999886542  4588888899999998763221      11111      1224689999999899999


Q ss_pred             EEeecCCeEEEEECCCcce-e----eeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc-Cchhhhhhcccccc
Q psy10348         73 LSVSKDHTLRLWNIKTDIC-I----AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-KPEIKDACAESYTF  146 (291)
Q Consensus        73 ~s~~~dg~i~vwd~~~~~~-~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~  146 (291)
                      +.|+.+|.|.--+-...+. .    ........|.++|+++.++|-+..++..+.|.++++|... ...++..+      
T Consensus       364 iVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~------  437 (555)
T KOG1587|consen  364 IVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL------  437 (555)
T ss_pred             EEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhh------
Confidence            9999999987733221111 1    1111236789999999999988766666559999999977 44433332      


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                                            +.+...+++++|+   .-.|+++..||.|.+||+.....          .++.+....
T Consensus       438 ----------------------~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~----------~Pv~s~~~~  485 (555)
T KOG1587|consen  438 ----------------------DSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDE----------EPVLSQKVC  485 (555)
T ss_pred             ----------------------hhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcccc----------CCccccccc
Confidence                                  2367779999999   55899999999999999977654          223333333


Q ss_pred             cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ......+.  ++++|+.|++|...|++.+|++..
T Consensus       486 ~~~l~~~~--~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  486 SPALTRVR--WSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             ccccceee--cCCCCcEEEEecCCCcEEEEEcCc
Confidence            33333333  445699999999999999999964

>KOG4227|consensus

Probab=99.71  E-value=2.1e-16  Score=118.98  Aligned_cols=201  Identities=17%  Similarity=0.180  Sum_probs=140.0

Q ss_pred             EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC------cceeeeeccccCCCCceEEEEEccCCCEEEEEecCC
Q psy10348         51 HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT------DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH  124 (291)
Q Consensus        51 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  124 (291)
                      .+.+|.+.|.++.|+. ++++|++|+.|..+++|.+..      .+++....  ..|...|.|++|....+++++|+.++
T Consensus        51 D~~~H~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~--~~H~SNIF~L~F~~~N~~~~SG~~~~  127 (609)
T KOG4227|consen   51 DVREHTGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVME--HPHRSNIFSLEFDLENRFLYSGERWG  127 (609)
T ss_pred             hhhhhccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceecc--CccccceEEEEEccCCeeEecCCCcc
Confidence            4568999999999999 899999999999999999763      34555442  45778999999999999999999999


Q ss_pred             cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCC
Q psy10348        125 SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       125 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      +|...|+++.+.+..+..                          +...+.|..+.-+  .+.|++.+.++.|.+||.+..
T Consensus       128 ~VI~HDiEt~qsi~V~~~--------------------------~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~  181 (609)
T KOG4227|consen  128 TVIKHDIETKQSIYVANE--------------------------NNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR  181 (609)
T ss_pred             eeEeeecccceeeeeecc--------------------------cCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence            999999999886654431                          0123356666666  779999999999999999876


Q ss_pred             CccccccCCCceeeeeeecCCcccEEEEEEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCc-ceeEEEeccccccceeee
Q psy10348        203 EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSS-IKFQILSHPRCMSAVRQT  280 (291)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~v~~~  280 (291)
                      ...           ...+.....+-..-..-++|. ..+|++.+..+-+-+||.+.....- .....+..+.....-.++
T Consensus       182 ~~~-----------~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~  250 (609)
T KOG4227|consen  182 QNP-----------ISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGS  250 (609)
T ss_pred             CCC-----------CceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhhe
Confidence            421           111211111112222334443 4678889999999999998765211 000111111112234678


Q ss_pred             EEccCCceeeC
Q psy10348        281 TLSKNGNVLLC  291 (291)
Q Consensus       281 ~~s~~g~~l~s  291 (291)
                      .|+|.|+.+++
T Consensus       251 ~~~~~G~Q~ms  261 (609)
T KOG4227|consen  251 LWSPSGNQFMS  261 (609)
T ss_pred             eeCCCCCeehh
Confidence            99999988764

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=1.3e-14  Score=118.00  Aligned_cols=216  Identities=13%  Similarity=0.031  Sum_probs=134.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEec---CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEe-ecCC--eE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAG---SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV-SKDH--TL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg--~i   81 (291)
                      .+.+.+.+.+||||++    .|+..+   .+..|.+|++.+++... +....+.+....|+| +++.|+.. +.+|  .|
T Consensus       196 ~~~~~~~~p~wSPDG~----~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SP-DG~~La~~~~~~g~~~I  269 (429)
T PRK03629        196 RSPQPLMSPAWSPDGS----KLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSP-DGSKLAFALSKTGSLNL  269 (429)
T ss_pred             cCCCceeeeEEcCCCC----EEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECC-CCCEEEEEEcCCCCcEE
Confidence            3456788999999985    666543   34579999998876432 222334456789999 88877654 4454  58


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEE--eccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLW--DLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      .+||+++++.....    .+...+....|+|+|+.|+.++. ++...+|  |+.+++.. .+.                 
T Consensus       270 ~~~d~~tg~~~~lt----~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt-----------------  327 (429)
T PRK03629        270 YVMDLASGQIRQVT----DGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RIT-----------------  327 (429)
T ss_pred             EEEECCCCCEEEcc----CCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Eee-----------------
Confidence            89999887655433    44456788999999998877765 3455555  55544321 110                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                 .+........|+  |++++..+.+   ..|.+||+.++...          .+.   ... .  .....
T Consensus       328 -----------~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~----------~Lt---~~~-~--~~~p~  380 (429)
T PRK03629        328 -----------WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ----------VLT---DTF-L--DETPS  380 (429)
T ss_pred             -----------cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE----------EeC---CCC-C--CCCce
Confidence                       012223455666  6666654432   35888898776431          121   111 0  11345


Q ss_pred             ecCCCcEEEEEcCCCc---EEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        234 MDYWQKILAVGNQSGR---TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~---i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ++|||++|+.++.++.   +.++++.....     ..+  ..|.+.+...+|+|-
T Consensus       381 ~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~-----~~l--~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        381 IAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-----ARL--PATDGQVKFPAWSPY  428 (429)
T ss_pred             ECCCCCEEEEEEcCCCceEEEEEECCCCCe-----EEC--ccCCCCcCCcccCCC
Confidence            6688999999887764   67777754421     222  245678889999983

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=2.8e-15  Score=122.18  Aligned_cols=196  Identities=13%  Similarity=0.115  Sum_probs=126.2

Q ss_pred             CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---CeEEEEECCCcceeeeeccccCCCCceEEEEEc
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD  111 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~  111 (291)
                      +..|.+||.+... .+.+..|...+...+|+| +++.|+..+.+   ..|++||+.+++..... ...++   ...++|+
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~l~-~~~g~---~~~~~wS  256 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKVVA-SFRGH---NGAPAFS  256 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEEEe-cCCCc---cCceeEC
Confidence            4689999986444 556677888899999999 88888887643   36999999877543321 11333   3468999


Q ss_pred             cCCCEEEEEe-cCCcEEEE--eccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEE
Q psy10348        112 LLGTKIMSCG-MDHSLKLW--DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVL  186 (291)
Q Consensus       112 ~~~~~l~~~~-~d~~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  186 (291)
                      |+|+.|+.+. .+|.+.||  |+.++... .+                            ..+...+....|+  |+.|+
T Consensus       257 PDG~~La~~~~~~g~~~Iy~~d~~~~~~~-~l----------------------------t~~~~~~~~~~wSpDG~~i~  307 (429)
T PRK01742        257 PDGSRLAFASSKDGVLNIYVMGANGGTPS-QL----------------------------TSGAGNNTEPSWSPDGQSIL  307 (429)
T ss_pred             CCCCEEEEEEecCCcEEEEEEECCCCCeE-ee----------------------------ccCCCCcCCEEECCCCCEEE
Confidence            9999888765 68876666  55444321 11                            1144456678887  55555


Q ss_pred             -EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee
Q psy10348        187 -SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF  265 (291)
Q Consensus       187 -~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  265 (291)
                       ++..++...+|++......           ...+ .+..  .  ...++|||++|+..+.++ +.+||+.+++.     
T Consensus       308 f~s~~~g~~~I~~~~~~~~~-----------~~~l-~~~~--~--~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~-----  365 (429)
T PRK01742        308 FTSDRSGSPQVYRMSASGGG-----------ASLV-GGRG--Y--SAQISADGKTLVMINGDN-VVKQDLTSGST-----  365 (429)
T ss_pred             EEECCCCCceEEEEECCCCC-----------eEEe-cCCC--C--CccCCCCCCEEEEEcCCC-EEEEECCCCCe-----
Confidence             4445788888876543211           1111 1111  1  235678899998888765 56699988753     


Q ss_pred             EEEeccccccceeeeEEccCCceee
Q psy10348        266 QILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       266 ~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..+.. ..  ...+++|+|||++|+
T Consensus       366 ~~lt~-~~--~~~~~~~sPdG~~i~  387 (429)
T PRK01742        366 EVLSS-TF--LDESPSISPNGIMII  387 (429)
T ss_pred             EEecC-CC--CCCCceECCCCCEEE
Confidence            11211 11  235688999999887

>KOG1334|consensus

Probab=99.70  E-value=4e-16  Score=120.22  Aligned_cols=273  Identities=13%  Similarity=0.153  Sum_probs=180.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCC-cEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDF-NLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|..+.|...+.    .|++|+.|..|.+||...++....+. +|...|....|-|..+ .-+++++.||.+++=.
T Consensus       140 ~H~GcVntV~FN~~Gd----~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~  215 (559)
T KOG1334|consen  140 KHKGCVNTVHFNQRGD----VLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE  215 (559)
T ss_pred             CCCCccceeeecccCc----eeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence            5788999999999984    99999999999999998887766664 8988898888988433 5688999999999987


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhcc------------ccccCCCCcc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAE------------SYTFNPARST  152 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~------------~~~~~~~~~~  152 (291)
                      +.....+.....+..|.++|.-++.-|... .|++++.|+.+.-+|++.......+..            .+...|....
T Consensus       216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~  295 (559)
T KOG1334|consen  216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN  295 (559)
T ss_pred             eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence            754443332233478999999999999765 689999999999999988765544331            1122222111


Q ss_pred             c-cccCc---------------------cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccc
Q psy10348        153 R-PFDTQ---------------------KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELR  208 (291)
Q Consensus       153 ~-~~~~~---------------------~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (291)
                      . .....                     ....|.... ....-.|++++|+  +.-+++.-.|-.|+++.-..+.-....
T Consensus       296 ~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~-~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~  374 (559)
T KOG1334|consen  296 EFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLV-EDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPD  374 (559)
T ss_pred             ccccCChhhhhhhhcccchhhccccchhhhcCCcccc-ccCcccceeEEecCCccceeeeecccceEEeccccccCCCCC
Confidence            0 00000                     000111100 1234468999998  555666677888999954433221111


Q ss_pred             cCCCceeeeee-ecCCcccEEEEEEE-ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        209 TNETNVTIINR-LNFKDCEIWFIRFS-MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       209 ~~~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                      +.......+.. +++|...-++-.+. +-|...|+++|+.-|.|.+|+-.+++.    +..++...|  -|+||.=+|--
T Consensus       375 ~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~ei----i~~MegDr~--VVNCLEpHP~~  448 (559)
T KOG1334|consen  375 PSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEI----IRFMEGDRH--VVNCLEPHPHL  448 (559)
T ss_pred             CCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHH----HHHhhcccc--eEeccCCCCCC
Confidence            11111122333 77776554433333 356789999999999999999998853    234443333  77888777766


Q ss_pred             ceeeC
Q psy10348        287 NVLLC  291 (291)
Q Consensus       287 ~~l~s  291 (291)
                      ..||+
T Consensus       449 PvLAs  453 (559)
T KOG1334|consen  449 PVLAS  453 (559)
T ss_pred             chhhc
Confidence            66653

>KOG1272|consensus

Probab=99.70  E-value=4.8e-17  Score=124.51  Aligned_cols=227  Identities=15%  Similarity=0.197  Sum_probs=168.9

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      +++.-.+.|.++.|-.+.    +++|++- ...++|||- .|..+..++.| ..|..+.|.| .--+|++++..|.++.-
T Consensus       165 ~Ei~v~Etv~Dv~~LHne----q~~AVAQ-K~y~yvYD~-~GtElHClk~~-~~v~rLeFLP-yHfLL~~~~~~G~L~Y~  236 (545)
T KOG1272|consen  165 FEINVMETVRDVTFLHNE----QFFAVAQ-KKYVYVYDN-NGTELHCLKRH-IRVARLEFLP-YHFLLVAASEAGFLKYQ  236 (545)
T ss_pred             eeeehhhhhhhhhhhcch----HHHHhhh-hceEEEecC-CCcEEeehhhc-Cchhhhcccc-hhheeeecccCCceEEE
Confidence            455567888899998877    3777764 578999995 47778888866 5689999999 77889999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |+.+|+.+..+   ..-.+.+..++-+|-+..+-+|...|+|.+|.....+++..+..                      
T Consensus       237 DVS~GklVa~~---~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLc----------------------  291 (545)
T KOG1272|consen  237 DVSTGKLVASI---RTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILC----------------------  291 (545)
T ss_pred             eechhhhhHHH---HccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHh----------------------
Confidence            99999999988   56678888899999999999999999999999999887776653                      


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                            |.++|.+++++  |.+++|.+.|..++|||++....            +.++.. ..+  ...++++  .+-++
T Consensus       292 ------H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~q------------l~t~~t-p~~--a~~ls~S--qkglL  348 (545)
T KOG1272|consen  292 ------HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQ------------LHTYRT-PHP--ASNLSLS--QKGLL  348 (545)
T ss_pred             ------cCCCcceEEECCCCcEEeecccccceeEeeeccccc------------cceeec-CCC--ccccccc--cccce
Confidence                  99999999998  88999999999999999998754            333322 111  2234444  44444


Q ss_pred             EEcCCCcEEEEEcC-CCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        243 VGNQSGRTYVWDLD-VQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       243 ~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      +.+....|.+|.-. .+.. ......+.+ ...++|..+.|.|-...|
T Consensus       349 A~~~G~~v~iw~d~~~~s~-~~~~pYm~H-~~~~~V~~l~FcP~EDvL  394 (545)
T KOG1272|consen  349 ALSYGDHVQIWKDALKGSG-HGETPYMNH-RCGGPVEDLRFCPYEDVL  394 (545)
T ss_pred             eeecCCeeeeehhhhcCCC-CCCcchhhh-ccCcccccceeccHHHee
Confidence            44444579999533 2221 111122222 334588888888855443

>KOG0322|consensus

Probab=99.69  E-value=3.2e-16  Score=111.81  Aligned_cols=161  Identities=12%  Similarity=0.106  Sum_probs=122.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce----------eEEEeeeccceeEEEEecCCCcEEEEeec
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC----------VRHFYGHGHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      ...+.++|..+-.+.. ...++++|.++|.+.+||+.++..          ......|+.+|.++.|.+ ....=++|+.
T Consensus       148 ~Klgsvmc~~~~~~c~-s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas-~~~rGisgga  225 (323)
T KOG0322|consen  148 SKLGSVMCQDKDHACG-STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYAS-SCDRGISGGA  225 (323)
T ss_pred             cccCceeeeecccccc-ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeech-hhcCCcCCCc
Confidence            3456677766443321 124778888999999999998733          333457899999999988 5556677888


Q ss_pred             CCeEEEEECCCc--ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccc
Q psy10348         78 DHTLRLWNIKTD--ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        78 dg~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~  155 (291)
                      +..+..|++...  .+... ....-.+-.|..+..-||++.+++++.|+.||||..++...+..+.              
T Consensus       226 ~dkl~~~Sl~~s~gslq~~-~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLk--------------  290 (323)
T KOG0322|consen  226 DDKLVMYSLNHSTGSLQIR-KEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLK--------------  290 (323)
T ss_pred             cccceeeeeccccCccccc-ceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhh--------------
Confidence            888999988643  21110 0012234567888999999999999999999999999999776664              


Q ss_pred             cCccccCcccccccccCcceeEEEEc-C-CEEEEecCCCeEEEecC
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL-G-DFVLSKSCENCIICWKP  199 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~l~~~~~d~~i~iwd~  199 (291)
                                    .|.+.|++++|+ + ++++.++.|++|.+|++
T Consensus       291 --------------yHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  291 --------------YHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             --------------hhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence                          499999999999 3 69999999999999986

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.68  E-value=2.4e-15  Score=108.41  Aligned_cols=119  Identities=18%  Similarity=0.350  Sum_probs=93.8

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEE--ecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec---
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAV--AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK---   77 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~--~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---   77 (291)
                      ..+.+..+++|.+++|+|+++    .+|+  |..++.|.+||++ ++.+..+.  ...+..+.|+| +|++|++++.   
T Consensus        52 ~~i~l~~~~~I~~~~WsP~g~----~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP-~G~~l~~~g~~n~  123 (194)
T PF08662_consen   52 ESIELKKEGPIHDVAWSPNGN----EFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSP-DGRFLVLAGFGNL  123 (194)
T ss_pred             ceeeccCCCceEEEEECcCCC----EEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECC-CCCEEEEEEccCC
Confidence            345555667899999999985    5544  3456799999996 66666664  56788999999 8999999864   


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec------CCcEEEEeccCc
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM------DHSLKLWDLTKP  134 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~  134 (291)
                      .|.|.+||.++.+.+...    .|. .+..++|+|+|++|+++..      |..++||+....
T Consensus       124 ~G~l~~wd~~~~~~i~~~----~~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  124 NGDLEFWDVRKKKKISTF----EHS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             CcEEEEEECCCCEEeecc----ccC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence            467999999988887765    343 4789999999999999874      788999998543

>KOG1517|consensus

Probab=99.68  E-value=2.1e-15  Score=126.50  Aligned_cols=196  Identities=14%  Similarity=0.149  Sum_probs=139.0

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCc-
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE-  104 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-  104 (291)
                      .+|+++|.-..|+|||+....+++.+. +-...|+++.-+...++.+++|..||.|++||.+.......+...+.|+.. 
T Consensus      1178 G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~ 1257 (1387)
T KOG1517|consen 1178 GHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVE 1257 (1387)
T ss_pred             CeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcc
Confidence            366666668899999999888777765 344567888776657899999999999999998765432222223788887 


Q ss_pred             -eEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccC--c-ceeEEE
Q psy10348        105 -VLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHR--N-YVDCVR  179 (291)
Q Consensus       105 -i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~v~~~~  179 (291)
                       |..+.+.+.|- .|++|+.||.|++||++.......+.                          ...|.  + ..+++.
T Consensus      1258 ~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~--------------------------iv~~~~yGs~lTal~ 1311 (1387)
T KOG1517|consen 1258 PIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLT--------------------------IVAHWEYGSALTALT 1311 (1387)
T ss_pred             cceeEEeecCCCcceeeeccCCeEEEEecccCcccccce--------------------------eeeccccCccceeee
Confidence             99999998775 49999999999999999853221111                          01121  2 377777


Q ss_pred             Ec--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        180 WL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       180 ~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      .+  ...+++|+. +.|+||++...+...++..       ..|.+ ....+  .++.++|-.-++|+|+.|..|.||...
T Consensus      1312 VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n-------~~F~~q~~gs~--scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1312 VHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYN-------PGFMGQRIGSV--SCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred             eccCCCeeeecCc-ceEEEEecChhhhcccccC-------cccccCcCCCc--ceeeecchhHhhhhccCCceEEEeecC
Confidence            77  668898888 9999999977655433321       11111 12233  345556668899999999999999877


Q ss_pred             CC
Q psy10348        257 VQ  258 (291)
Q Consensus       257 ~~  258 (291)
                      ..
T Consensus      1382 k~ 1383 (1387)
T KOG1517|consen 1382 KP 1383 (1387)
T ss_pred             Cc
Confidence            65

>KOG1240|consensus

Probab=99.67  E-value=5e-15  Score=125.93  Aligned_cols=205  Identities=17%  Similarity=0.265  Sum_probs=140.0

Q ss_pred             EccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-------ceeeeeccccCCCCceEEEEEccC
Q psy10348         41 FSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-------ICIAIFGGVEGHRDEVLSADFDLL  113 (291)
Q Consensus        41 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~  113 (291)
                      |+++ |..+..+..|...|..++.++.++.+|+||+.||+|++|+.++-       +...++   ......+.++...+.
T Consensus      1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~lty---s~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTY---SPEGSRVEKVTMCGN 1109 (1431)
T ss_pred             CCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEE---eccCCceEEEEeccC
Confidence            7764 88899999999999999999856699999999999999998642       112222   345778999999999


Q ss_pred             CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CC-EEEEec
Q psy10348        114 GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GD-FVLSKS  189 (291)
Q Consensus       114 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~-~l~~~~  189 (291)
                      ++.+|.++.||.|++.++........... ..                  .....+.....|..-+|.   +. .++.+.
T Consensus      1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~~-~~------------------ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T 1170 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVAT-QV------------------RIPNLKKDGVVVSMHAFTAIVQSHVLVYAT 1170 (1431)
T ss_pred             CCeEEEEcCCCeEEEEEccccccccceee-ee------------------ecccccCCCceEEeecccccccceeEEEEE
Confidence            99999999999999999876421111100 00                  000001122234444444   33 778888


Q ss_pred             CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe
Q psy10348        190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS  269 (291)
Q Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  269 (291)
                      .-+.|..||+++.....          ........+.|+.+  +.+|.+.++++|+..|.+.+||++-+.++    ....
T Consensus      1171 ~~~~iv~~D~r~~~~~w----------~lk~~~~hG~vTSi--~idp~~~WlviGts~G~l~lWDLRF~~~i----~sw~ 1234 (1431)
T KOG1240|consen 1171 DLSRIVSWDTRMRHDAW----------RLKNQLRHGLVTSI--VIDPWCNWLVIGTSRGQLVLWDLRFRVPI----LSWE 1234 (1431)
T ss_pred             eccceEEecchhhhhHH----------hhhcCccccceeEE--EecCCceEEEEecCCceEEEEEeecCcee----eccc
Confidence            89999999999875521          12223334555554  45566999999999999999999987532    3333


Q ss_pred             ccccccceeeeEEccC
Q psy10348        270 HPRCMSAVRQTTLSKN  285 (291)
Q Consensus       270 ~~~~~~~v~~~~~s~~  285 (291)
                      + ++..+|+.+..+|-
T Consensus      1235 ~-P~~~~i~~v~~~~~ 1249 (1431)
T KOG1240|consen 1235 H-PARAPIRHVWLCPT 1249 (1431)
T ss_pred             C-cccCCcceEEeecc
Confidence            3 33366776666653

>KOG2394|consensus

Probab=99.66  E-value=1.3e-15  Score=118.84  Aligned_cols=95  Identities=20%  Similarity=0.254  Sum_probs=87.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +..|+..+|+||+    ++||+.+.||.+||+|..+.+++..++.--+...|++|+| |+++|++|++|--|.||.+..+
T Consensus       290 ~g~in~f~FS~DG----~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSP-DGKyIvtGGEDDLVtVwSf~er  364 (636)
T KOG2394|consen  290 EGSINEFAFSPDG----KYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSP-DGKYIVTGGEDDLVTVWSFEER  364 (636)
T ss_pred             cccccceeEcCCC----ceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcC-CccEEEecCCcceEEEEEeccc
Confidence            4589999999998    6999999999999999999888877766667899999999 9999999999999999999998


Q ss_pred             ceeeeeccccCCCCceEEEEEcc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      +.+..=   ++|+..|..++|.|
T Consensus       365 RVVARG---qGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  365 RVVARG---QGHKSWVSVVAFDP  384 (636)
T ss_pred             eEEEec---cccccceeeEeecc
Confidence            888876   79999999999987

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.66  E-value=1.3e-13  Score=109.02  Aligned_cols=208  Identities=13%  Similarity=0.121  Sum_probs=127.4

Q ss_pred             ceeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCC-cc---eeEEEeeeccceeEEEEecCCCcEEEE-eecCCeEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAF-HA---CVRHFYGHGHAINELKFHPQDFNLLLS-VSKDHTLRLW   84 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~-~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~~dg~i~vw   84 (291)
                      .....++|+|+++    ++++++ .++.|.+|++++ +.   .+..+. +......++++| +++++++ ...++.|.+|
T Consensus        80 ~~p~~i~~~~~g~----~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p-~g~~l~v~~~~~~~v~v~  153 (330)
T PRK11028         80 GSPTHISTDHQGR----FLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDP-DNRTLWVPCLKEDRIRLF  153 (330)
T ss_pred             CCceEEEECCCCC----EEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCC-CCCEEEEeeCCCCEEEEE
Confidence            3456788998884    666665 589999999864 32   222232 234467788999 7777754 4556999999


Q ss_pred             ECCCcceeee-----eccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCc--hhhhhhccccccCCCCcccccc
Q psy10348         85 NIKTDICIAI-----FGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKP--EIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        85 d~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      |+.+...+..     ..  .........+.|+|+|++++++.. ++.|.+||+...  +. .... .+...|..      
T Consensus       154 d~~~~g~l~~~~~~~~~--~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~-~~~~-~~~~~p~~------  223 (330)
T PRK11028        154 TLSDDGHLVAQEPAEVT--TVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEI-ECVQ-TLDMMPAD------  223 (330)
T ss_pred             EECCCCcccccCCCcee--cCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCE-EEEE-EEecCCCc------
Confidence            9976432211     10  112345678999999999988876 899999999742  21 1110 00000100      


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                  ..+......+.++  +++++++.. ++.|.+|++......        .+.+.......   ....+.
T Consensus       224 ------------~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~--------~~~~~~~~~~~---~p~~~~  280 (330)
T PRK11028        224 ------------FSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSV--------LSFEGHQPTET---QPRGFN  280 (330)
T ss_pred             ------------CCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCe--------EEEeEEEeccc---cCCceE
Confidence                        0011223356666  667777754 789999998654211        01122222111   112356


Q ss_pred             ecCCCcEEEEEcC-CCcEEEEEcCC
Q psy10348        234 MDYWQKILAVGNQ-SGRTYVWDLDV  257 (291)
Q Consensus       234 ~~~~~~~l~~~~~-dg~i~vwd~~~  257 (291)
                      ++|+|++|+++.. +++|.+|++..
T Consensus       281 ~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        281 IDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             ECCCCCEEEEEEccCCcEEEEEEcC
Confidence            7788999998775 89999998864

>KOG2111|consensus

Probab=99.66  E-value=3.6e-13  Score=98.91  Aligned_cols=221  Identities=16%  Similarity=0.187  Sum_probs=144.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec--cceeEEEEecCCCcEEEEeecC------CeEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG--HAINELKFHPQDFNLLLSVSKD------HTLR   82 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~d------g~i~   82 (291)
                      ....+++|+.|..    .+++|..+| .+||+.+.-+....-+.+.  -.+..|-|-. + -+.+.|+.+      ..|.
T Consensus         6 ~~~lsvs~NQD~S----cFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~-N-~laLVGGg~~pky~pNkvi   78 (346)
T KOG2111|consen    6 PKTLSVSFNQDHS----CFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRS-N-YLALVGGGSRPKYPPNKVI   78 (346)
T ss_pred             CceeEEEEccCCc----eEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhh-c-eEEEecCCCCCCCCCceEE
Confidence            4455689998884    888887765 8999987533322222122  2333344443 2 233334333      4699


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc-CchhhhhhccccccCCCC----------c
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-KPEIKDACAESYTFNPAR----------S  151 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~----------~  151 (291)
                      |||=...+++..+    ....+|.++.+.++  .+++.- .+.|.||... ..+.+..+..  ..+|.+          .
T Consensus        79 IWDD~k~~~i~el----~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et--~~NPkGlC~~~~~~~k~  149 (346)
T KOG2111|consen   79 IWDDLKERCIIEL----SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIET--RSNPKGLCSLCPTSNKS  149 (346)
T ss_pred             EEecccCcEEEEE----EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeec--ccCCCceEeecCCCCce
Confidence            9996667777776    67899999999754  455554 6789999887 4444444332  112221          1


Q ss_pred             cccccCcc-----------ccCcccccccccCcceeEEEEc--CCEEEEecCCCe-EEEecCCCCCccccccCCCceeee
Q psy10348        152 TRPFDTQK-----------EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENC-IICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       152 ~~~~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      ...+...+           .....-....+|.+.|.|++.+  |.++|+++..|+ |+|||..++..            +
T Consensus       150 ~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~------------l  217 (346)
T KOG2111|consen  150 LLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTL------------L  217 (346)
T ss_pred             EEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcE------------e
Confidence            11111111           1111224457899999999998  889999999885 79999999854            6


Q ss_pred             eeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        218 NRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      .++.........-+++++|+..+||++|+.|++.|+.++...
T Consensus       218 ~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  218 QELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             eeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence            667655555555566677889999999999999999998644

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=7.3e-14  Score=114.14  Aligned_cols=215  Identities=15%  Similarity=0.027  Sum_probs=133.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCC--eE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDH--TL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg--~i   81 (291)
                      .+.+.+.+.+|+|+++    .|+..+.   +..|++||+.+++.. .+....+...+..|+| +++.|+ +.+.+|  .|
T Consensus       201 ~~~~~v~~p~wSpDg~----~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~Sp-DG~~l~~~~s~~g~~~I  274 (433)
T PRK04922        201 RSAEPILSPAWSPDGK----KLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSP-DGRRLALTLSRDGNPEI  274 (433)
T ss_pred             cCCCccccccCCCCCC----EEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECC-CCCEEEEEEeCCCCceE
Confidence            3456788899999984    7776653   347999999877653 3333445566889999 777654 555555  59


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCc--EEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHS--LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      .+||+.+++... +   ..+.......+|+|+|+.|+.++. +|.  |.++|+.+++......                 
T Consensus       275 y~~d~~~g~~~~-l---t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~-----------------  333 (433)
T PRK04922        275 YVMDLGSRQLTR-L---TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF-----------------  333 (433)
T ss_pred             EEEECCCCCeEE-C---ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec-----------------
Confidence            999998876543 3   345555577899999998887764 455  5555665554221100                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                  +.......+|+  |++++..+.+   ..|.+||+.+++..             .+.... ..  ....
T Consensus       334 ------------~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-------------~Lt~~~-~~--~~p~  385 (433)
T PRK04922        334 ------------QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-------------TLTPGS-LD--ESPS  385 (433)
T ss_pred             ------------CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-------------ECCCCC-CC--CCce
Confidence                        11223346676  6676655433   26999998776431             111111 11  1235


Q ss_pred             ecCCCcEEEEEcCC---CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        234 MDYWQKILAVGNQS---GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       234 ~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                      ++|||++++..+.+   +.|.++++.....     ..+.  .+.+.+...+|+|
T Consensus       386 ~spdG~~i~~~s~~~g~~~L~~~~~~g~~~-----~~l~--~~~g~~~~p~wsp  432 (433)
T PRK04922        386 FAPNGSMVLYATREGGRGVLAAVSTDGRVR-----QRLV--SADGEVREPAWSP  432 (433)
T ss_pred             ECCCCCEEEEEEecCCceEEEEEECCCCce-----EEcc--cCCCCCCCCccCC
Confidence            67889988777653   4677888865321     2222  2345677888987

>KOG2321|consensus

Probab=99.65  E-value=2.6e-14  Score=112.65  Aligned_cols=241  Identities=12%  Similarity=0.100  Sum_probs=161.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee----------E------------------EEeeec--
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV----------R------------------HFYGHG--   56 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~----------~------------------~~~~~~--   56 (291)
                      +.+...-+.+..+||+.   .++|+|...-.|++||+....+.          .                  .+.-|.  
T Consensus        48 fe~p~ast~ik~s~DGq---Y~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~  124 (703)
T KOG2321|consen   48 FEMPTASTRIKVSPDGQ---YLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY  124 (703)
T ss_pred             cCCccccceeEecCCCc---EEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhc
Confidence            44567778899999997   67888888899999998743210          0                  001010  


Q ss_pred             ---------cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         57 ---------HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        57 ---------~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                               ..-..|+++..+..+++.| ....|+-++++.|+.+..+   ....+.++++..++-..+|++|+.+|.|.
T Consensus       125 G~hy~~RIP~~GRDm~y~~~scDly~~g-sg~evYRlNLEqGrfL~P~---~~~~~~lN~v~in~~hgLla~Gt~~g~VE  200 (703)
T KOG2321|consen  125 GRHYRTRIPKFGRDMKYHKPSCDLYLVG-SGSEVYRLNLEQGRFLNPF---ETDSGELNVVSINEEHGLLACGTEDGVVE  200 (703)
T ss_pred             CeeeeeecCcCCccccccCCCccEEEee-cCcceEEEEcccccccccc---ccccccceeeeecCccceEEecccCceEE
Confidence                     1223344443233444444 4456888899999999888   56668999999999999999999999999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      .||.++......+......+....                 ......|+++.|.  |-.+++|+.+|.+.|||++..++.
T Consensus       201 fwDpR~ksrv~~l~~~~~v~s~pg-----------------~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl  263 (703)
T KOG2321|consen  201 FWDPRDKSRVGTLDAASSVNSHPG-----------------GDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL  263 (703)
T ss_pred             EecchhhhhheeeecccccCCCcc-----------------ccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCce
Confidence            999999887766553221111000                 0023349999998  558999999999999999998764


Q ss_pred             ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        206 ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                                 +..-++..-+|..+.|....++..+++. ....++|||-.+++..    ..++   ....++.+++-|+
T Consensus       264 -----------~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~----asiE---pt~~lND~C~~p~  324 (703)
T KOG2321|consen  264 -----------LVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPM----ASIE---PTSDLNDFCFVPG  324 (703)
T ss_pred             -----------eecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCce----eecc---ccCCcCceeeecC
Confidence                       2223333444555555444234455554 4568999999999653    2222   2346888888887


Q ss_pred             Cceee
Q psy10348        286 GNVLL  290 (291)
Q Consensus       286 g~~l~  290 (291)
                      +-+++
T Consensus       325 sGm~f  329 (703)
T KOG2321|consen  325 SGMFF  329 (703)
T ss_pred             CceEE
Confidence            65543

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=1.7e-13  Score=112.10  Aligned_cols=197  Identities=15%  Similarity=0.121  Sum_probs=127.5

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec---CCeEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK---DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      ..|.++|.+ +...+.+..|...+...+|+| +++.|+..+.   +..|.+||+.+++... +   ..+.+.+....|+|
T Consensus       182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~~-l---~~~~g~~~~~~~SP  255 (435)
T PRK05137        182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQREL-V---GNFPGMTFAPRFSP  255 (435)
T ss_pred             eEEEEECCC-CCCcEEEecCCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEEE-e---ecCCCcccCcEECC
Confidence            478899985 454566767888999999999 8888877653   4689999998876543 3   35566778899999


Q ss_pred             CCCEEE-EEecCCc--EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE
Q psy10348        113 LGTKIM-SCGMDHS--LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS  187 (291)
Q Consensus       113 ~~~~l~-~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  187 (291)
                      +|+.|+ +.+.++.  |.+||+.++.... +.                            .+........|+  |+.|+.
T Consensus       256 DG~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt----------------------------~~~~~~~~~~~spDG~~i~f  306 (435)
T PRK05137        256 DGRKVVMSLSQGGNTDIYTMDLRSGTTTR-LT----------------------------DSPAIDTSPSYSPDGSQIVF  306 (435)
T ss_pred             CCCEEEEEEecCCCceEEEEECCCCceEE-cc----------------------------CCCCccCceeEcCCCCEEEE
Confidence            999775 5555655  6777887765322 11                            123334456776  666665


Q ss_pred             ecC-CC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC---CcEEEEEcCCCCCC
Q psy10348        188 KSC-EN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS---GRTYVWDLDVQDPS  261 (291)
Q Consensus       188 ~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~  261 (291)
                      .+. ++  .|.++|+.....             ..+........  ...++|||++|+..+.+   ..|.+||+.++.. 
T Consensus       307 ~s~~~g~~~Iy~~d~~g~~~-------------~~lt~~~~~~~--~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-  370 (435)
T PRK05137        307 ESDRSGSPQLYVMNADGSNP-------------RRISFGGGRYS--TPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-  370 (435)
T ss_pred             EECCCCCCeEEEEECCCCCe-------------EEeecCCCccc--CeEECCCCCEEEEEEcCCCceEEEEEECCCCce-
Confidence            543 33  677788765432             22222222222  24566889999887643   3688888765431 


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+.. +  ..+....|+|||+.|+
T Consensus       371 ----~~lt~-~--~~~~~p~~spDG~~i~  392 (435)
T PRK05137        371 ----RILTS-G--FLVEGPTWAPNGRVIM  392 (435)
T ss_pred             ----EeccC-C--CCCCCCeECCCCCEEE
Confidence                22222 1  2467889999999875

>KOG3881|consensus

Probab=99.64  E-value=4.5e-14  Score=106.21  Aligned_cols=193  Identities=12%  Similarity=0.073  Sum_probs=143.6

Q ss_pred             CEEEEecCCCeEEEEccCCcc----eeEEEeeeccceeEEEEecCCCcEEEEeecC--CeEEEEECCCcceeeeeccccC
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHA----CVRHFYGHGHAINELKFHPQDFNLLLSVSKD--HTLRLWNIKTDICIAIFGGVEG  100 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~  100 (291)
                      ..|++|-.+|.+.+|..+.+.    .+..+..+ ..+..|.-++....++|+|+..  ..+.+||++..+.+..-+..+.
T Consensus       116 g~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn  194 (412)
T KOG3881|consen  116 GTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN  194 (412)
T ss_pred             CEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC
Confidence            378888999999999987443    33344433 5577777788777888889998  8899999998765544322111


Q ss_pred             ------CCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccC
Q psy10348        101 ------HRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHR  172 (291)
Q Consensus       101 ------~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (291)
                            -.-.++++.|-+.  ...|++++.-+.+++||.+.++..                           +..++.-+
T Consensus       195 D~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP---------------------------V~~fd~~E  247 (412)
T KOG3881|consen  195 DRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP---------------------------VAQFDFLE  247 (412)
T ss_pred             ccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc---------------------------eeEecccc
Confidence                  1224678889887  789999999999999999866521                           11112245


Q ss_pred             cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcE
Q psy10348        173 NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRT  250 (291)
Q Consensus       173 ~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i  250 (291)
                      .+++++...  ++++++|..-+.+..||++.+...           ...+.+-.+.+..+...  |.++++|+++-|..+
T Consensus       248 ~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~-----------g~~~kg~tGsirsih~h--p~~~~las~GLDRyv  314 (412)
T KOG3881|consen  248 NPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL-----------GCGLKGITGSIRSIHCH--PTHPVLASCGLDRYV  314 (412)
T ss_pred             CcceeeeecCCCcEEEEecccchhheecccCceee-----------ccccCCccCCcceEEEc--CCCceEEeeccceeE
Confidence            667777665  889999999999999999998542           33477777777776555  558999999999999


Q ss_pred             EEEEcCCCCC
Q psy10348        251 YVWDLDVQDP  260 (291)
Q Consensus       251 ~vwd~~~~~~  260 (291)
                      ||+|+.+.+.
T Consensus       315 RIhD~ktrkl  324 (412)
T KOG3881|consen  315 RIHDIKTRKL  324 (412)
T ss_pred             EEeecccchh
Confidence            9999999654

>KOG0974|consensus

Probab=99.64  E-value=1.4e-14  Score=121.20  Aligned_cols=186  Identities=18%  Similarity=0.204  Sum_probs=145.4

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeecc----ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGH----AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR  102 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~  102 (291)
                      +.++.+..++.+.+||...+.....++....    ...-+-+++ +.-++++|+.-+.|.+|+....+....+   .+|.
T Consensus       100 k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~-~~~~i~~gsv~~~iivW~~~~dn~p~~l---~GHe  175 (967)
T KOG0974|consen  100 KKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSA-EELYIASGSVFGEIIVWKPHEDNKPIRL---KGHE  175 (967)
T ss_pred             ceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccC-cEEEEEeccccccEEEEeccccCCccee---cccC
Confidence            5888888899999999987777666653322    122233466 6789999999999999998744333334   7999


Q ss_pred             CceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcC
Q psy10348        103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG  182 (291)
Q Consensus       103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  182 (291)
                      +.|..+.|+.+|+++++.+.|.++|+|++++.+...                           .+..+|...|..+.|..
T Consensus       176 G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~---------------------------~~~fgHsaRvw~~~~~~  228 (967)
T KOG0974|consen  176 GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG---------------------------CTGFGHSARVWACCFLP  228 (967)
T ss_pred             CceEEEEEccCCcEEEEEecCcceeeeecccccccC---------------------------cccccccceeEEEEecc
Confidence            999999999999999999999999999999988543                           12245999999999998


Q ss_pred             CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        183 DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      +.+++++.|.+.++|+....+             +..+..|. ..++.+...  ++...+++++.||.+++|++...
T Consensus       229 n~i~t~gedctcrvW~~~~~~-------------l~~y~~h~g~~iw~~~~~--~~~~~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  229 NRIITVGEDCTCRVWGVNGTQ-------------LEVYDEHSGKGIWKIAVP--IGVIIKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             ceeEEeccceEEEEEecccce-------------ehhhhhhhhcceeEEEEc--CCceEEEeeccCcchhhhhhhcc
Confidence            899999999999999654432             44555553 446666555  44888999999999999999865

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.63  E-value=5.3e-14  Score=101.50  Aligned_cols=147  Identities=17%  Similarity=0.260  Sum_probs=103.8

Q ss_pred             EEEEeeeccCCCCCEEEEecC----------CCeEEEEccC-CcceeEEEee-eccceeEEEEecCCCcEEEE--eecCC
Q psy10348         14 YTCAWSMDLESGRPLLAVAGS----------RAVIRIFSPA-FHACVRHFYG-HGHAINELKFHPQDFNLLLS--VSKDH   79 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~----------dg~i~vw~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s--~~~dg   79 (291)
                      ..+.|+|+|+    +|++-..          -|...+|.++ .+.....+.- ..++|.+++|+| +++.||+  |..++
T Consensus         9 ~~~~W~~~G~----~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP-~g~~favi~g~~~~   83 (194)
T PF08662_consen    9 AKLHWQPSGD----YLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSP-NGNEFAVIYGSMPA   83 (194)
T ss_pred             EEEEecccCC----EEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECc-CCCEEEEEEccCCc
Confidence            3578888885    5444322          1345555552 2334444442 345799999999 7777654  44677


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      .|.+||++ ++.+..+     +...+..+.|+|+|++|++++.   .|.|.+||+++.+.+....               
T Consensus        84 ~v~lyd~~-~~~i~~~-----~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~---------------  142 (194)
T PF08662_consen   84 KVTLYDVK-GKKIFSF-----GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE---------------  142 (194)
T ss_pred             ccEEEcCc-ccEeEee-----cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc---------------
Confidence            99999997 6666665     3467788999999999999875   4679999999877665543               


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecC------CCeEEEecCCC
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC------ENCIICWKPGR  201 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~------d~~i~iwd~~~  201 (291)
                                    |. .++.++|+  |++++++..      |+.++||+...
T Consensus       143 --------------~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G  180 (194)
T PF08662_consen  143 --------------HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQG  180 (194)
T ss_pred             --------------cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecC
Confidence                          33 37889998  888888764      78889998753

>KOG0644|consensus

Probab=99.62  E-value=5.3e-16  Score=126.96  Aligned_cols=119  Identities=18%  Similarity=0.352  Sum_probs=107.8

Q ss_pred             eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        48 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      .++.+.+|-..|.|+.|.. .+.++++|+.|..++||..+++.++...   .+|.+.|+.++.+.+...+++++.|..|+
T Consensus       182 ~ikrLlgH~naVyca~fDr-tg~~Iitgsdd~lvKiwS~et~~~lAs~---rGhs~ditdlavs~~n~~iaaaS~D~vIr  257 (1113)
T KOG0644|consen  182 NIKRLLGHRNAVYCAIFDR-TGRYIITGSDDRLVKIWSMETARCLASC---RGHSGDITDLAVSSNNTMIAAASNDKVIR  257 (1113)
T ss_pred             HHHHHHhhhhheeeeeecc-ccceEeecCccceeeeeeccchhhhccC---CCCccccchhccchhhhhhhhcccCceEE
Confidence            3445678999999999999 9999999999999999999999999888   89999999999999998999999999999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCC
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~  200 (291)
                      +|.+..+.++..+.                            +|.+.|++++|++..  +.+.||++++||.+
T Consensus       258 vWrl~~~~pvsvLr----------------------------ghtgavtaiafsP~~--sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  258 VWRLPDGAPVSVLR----------------------------GHTGAVTAIAFSPRA--SSSDDGTCRIWDAR  300 (1113)
T ss_pred             EEecCCCchHHHHh----------------------------ccccceeeeccCccc--cCCCCCceEecccc
Confidence            99999999876664                            599999999998544  77889999999988

>KOG1240|consensus

Probab=99.62  E-value=1.9e-13  Score=116.57  Aligned_cols=210  Identities=10%  Similarity=0.125  Sum_probs=146.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      +|...+..++.++...   .++++|+.||+|++|+...-       +...++..-...+.++...+ .++.+|.++.||.
T Consensus      1046 Ehs~~v~k~a~s~~~~---s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~-~~~~~Av~t~DG~ 1121 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHT---SLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG-NGDQFAVSTKDGS 1121 (1431)
T ss_pred             hccccccceeecCCCC---ceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc-CCCeEEEEcCCCe
Confidence            4667777777776653   59999999999999997632       12223333457889999998 8899999999999


Q ss_pred             EEEEECCCc--c-----eeeeeccccCCCCceEEEEEccC-C-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348         81 LRLWNIKTD--I-----CIAIFGGVEGHRDEVLSADFDLL-G-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS  151 (291)
Q Consensus        81 i~vwd~~~~--~-----~~~~~~~~~~~~~~i~~~~~~~~-~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~  151 (291)
                      |.+.++...  +     .... .........|..-+|... + ..++.+..-+.|..||+++......++.         
T Consensus      1122 v~~~~id~~~~~~~~~~~~ri-~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~--------- 1191 (1431)
T KOG1240|consen 1122 VRVLRIDHYNVSKRVATQVRI-PNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN--------- 1191 (1431)
T ss_pred             EEEEEccccccccceeeeeec-ccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc---------
Confidence            999998752  1     1111 111223333444455433 2 3678888889999999999887666542         


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec-CCcccEE
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-FKDCEIW  228 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~  228 (291)
                                       ....+.|++++.+  ++++++|+..|.+.+||++=...            +.++. .+..++.
T Consensus      1192 -----------------~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~------------i~sw~~P~~~~i~ 1242 (1431)
T KOG1240|consen 1192 -----------------QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVP------------ILSWEHPARAPIR 1242 (1431)
T ss_pred             -----------------CccccceeEEEecCCceEEEEecCCceEEEEEeecCce------------eecccCcccCCcc
Confidence                             1145679999988  78999999999999999987644            44443 3345566


Q ss_pred             EEEEEecCC-CcEE-EEEc-CCCcEEEEEcCCCCC
Q psy10348        229 FIRFSMDYW-QKIL-AVGN-QSGRTYVWDLDVQDP  260 (291)
Q Consensus       229 ~~~~~~~~~-~~~l-~~~~-~dg~i~vwd~~~~~~  260 (291)
                      -+.+++-+. .... .+|+ ..+.|.+|++.++.+
T Consensus      1243 ~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1243 HVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred             eEEeeccCCCCceEEEecccCCCceeeeecccCcc
Confidence            666666432 2344 4444 678899999999854

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=2.3e-13  Score=110.92  Aligned_cols=216  Identities=15%  Similarity=0.051  Sum_probs=131.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~i~v   83 (291)
                      .+.+.+.+.+|+|++.    .|+..+.   ...|.+||+.+++... +....+.+....|+| +++.|+ +.+.+|...|
T Consensus       193 ~~~~~v~~p~wSPDG~----~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SP-DG~~la~~~~~~g~~~I  266 (427)
T PRK02889        193 SSPEPIISPAWSPDGT----KLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSP-DGRTLAVALSRDGNSQI  266 (427)
T ss_pred             cCCCCcccceEcCCCC----EEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECC-CCCEEEEEEccCCCceE
Confidence            4567888999999984    7766553   2469999999887543 333445667899999 777665 5677887666


Q ss_pred             EE--CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEecc--CchhhhhhccccccCCCCccccccCc
Q psy10348         84 WN--IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLT--KPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        84 wd--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      |.  +..+. ...+   ..+........|+|+|+.|+..+. +|...+|.+.  ++... .+.    +            
T Consensus       267 y~~d~~~~~-~~~l---t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt----~------------  325 (427)
T PRK02889        267 YTVNADGSG-LRRL---TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVT----F------------  325 (427)
T ss_pred             EEEECCCCC-cEEC---CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEe----c------------
Confidence            65  44443 3444   345555677889999998876654 5667777654  33211 100    0            


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCC---eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN---CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                  .........|+  |++|+..+.++   .|.+||+.+++..             .+.... ..  ...+
T Consensus       326 ------------~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-------------~lt~~~-~~--~~p~  377 (427)
T PRK02889        326 ------------TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-------------ALTDTT-RD--ESPS  377 (427)
T ss_pred             ------------CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-------------EccCCC-Cc--cCce
Confidence                        11112234565  77777655443   6999998876431             111111 11  2345


Q ss_pred             ecCCCcEEEEEcCCC---cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        234 MDYWQKILAVGNQSG---RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ++|||++|+..+.++   .+.+.++...     ....+.  .+.+.+...+|+|-
T Consensus       378 ~spdg~~l~~~~~~~g~~~l~~~~~~g~-----~~~~l~--~~~g~~~~p~wsp~  425 (427)
T PRK02889        378 FAPNGRYILYATQQGGRSVLAAVSSDGR-----IKQRLS--VQGGDVREPSWGPF  425 (427)
T ss_pred             ECCCCCEEEEEEecCCCEEEEEEECCCC-----ceEEee--cCCCCCCCCccCCC
Confidence            678899988877544   3555566332     112222  23457788899884

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=6.8e-13  Score=108.07  Aligned_cols=197  Identities=12%  Similarity=0.093  Sum_probs=122.2

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee---cCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS---KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      ..|.++|.+.... +.+..+...+...+|+| +++.|+..+   .+..|.+|++.+++.....    .....+....|+|
T Consensus       179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~~l~----~~~~~~~~~~~SP  252 (429)
T PRK03629        179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVA----SFPRHNGAPAFSP  252 (429)
T ss_pred             eeEEEEcCCCCCC-EEeecCCCceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeEEcc----CCCCCcCCeEECC
Confidence            3789999874443 44555667899999999 888887654   2357999999887644322    2233345689999


Q ss_pred             CCCEEEEE-ecCC--cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE
Q psy10348        113 LGTKIMSC-GMDH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS  187 (291)
Q Consensus       113 ~~~~l~~~-~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  187 (291)
                      +|+.|+.. +.+|  .|.+||+.+++......                             +...+....|+  |+.|+.
T Consensus       253 DG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~-----------------------------~~~~~~~~~wSPDG~~I~f  303 (429)
T PRK03629        253 DGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-----------------------------GRSNNTEPTWFPDSQNLAY  303 (429)
T ss_pred             CCCEEEEEEcCCCCcEEEEEECCCCCEEEccC-----------------------------CCCCcCceEECCCCCEEEE
Confidence            99988765 4455  48889998765432111                             22345667787  666665


Q ss_pred             ecC-CCeEEEe--cCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC---CcEEEEEcCCCCCC
Q psy10348        188 KSC-ENCIICW--KPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS---GRTYVWDLDVQDPS  261 (291)
Q Consensus       188 ~~~-d~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~  261 (291)
                      .+. ++...+|  |+..+..             ..+........  ...++|||++|+..+.+   ..|.+||+.+++. 
T Consensus       304 ~s~~~g~~~Iy~~d~~~g~~-------------~~lt~~~~~~~--~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-  367 (429)
T PRK03629        304 TSDQAGRPQVYKVNINGGAP-------------QRITWEGSQNQ--DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-  367 (429)
T ss_pred             EeCCCCCceEEEEECCCCCe-------------EEeecCCCCcc--CEEECCCCCEEEEEEccCCCceEEEEECCCCCe-
Confidence            554 4444444  5554432             12222222222  34567889998876543   3588899988742 


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+...   ....+..|+|||++|+
T Consensus       368 ----~~Lt~~---~~~~~p~~SpDG~~i~  389 (429)
T PRK03629        368 ----QVLTDT---FLDETPSIAPNGTMVI  389 (429)
T ss_pred             ----EEeCCC---CCCCCceECCCCCEEE
Confidence                222221   1234678999999886

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=3e-13  Score=110.21  Aligned_cols=197  Identities=12%  Similarity=0.085  Sum_probs=123.0

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---CeEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      ..|.++|.. +...+.+..+...+.+.+|+| +++.|+..+.+   ..|.+||+.+++.....    ...+.+....|+|
T Consensus       176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~l~----~~~g~~~~~~~SP  249 (427)
T PRK02889        176 YQLQISDAD-GQNAQSALSSPEPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRVVA----NFKGSNSAPAWSP  249 (427)
T ss_pred             cEEEEECCC-CCCceEeccCCCCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEEee----cCCCCccceEECC
Confidence            467788874 555555666778899999999 88888776543   35999999988754432    3345567899999


Q ss_pred             CCCEEE-EEecCCcEEEEecc--CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE
Q psy10348        113 LGTKIM-SCGMDHSLKLWDLT--KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS  187 (291)
Q Consensus       113 ~~~~l~-~~~~d~~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  187 (291)
                      +|+.|+ +.+.+|...+|.++  .+.. ..+.                            .+........|+  |+.|+.
T Consensus       250 DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt----------------------------~~~~~~~~~~wSpDG~~l~f  300 (427)
T PRK02889        250 DGRTLAVALSRDGNSQIYTVNADGSGL-RRLT----------------------------QSSGIDTEPFFSPDGRSIYF  300 (427)
T ss_pred             CCCEEEEEEccCCCceEEEEECCCCCc-EECC----------------------------CCCCCCcCeEEcCCCCEEEE
Confidence            999876 56778887777653  3321 1111                            122334456777  666665


Q ss_pred             ec-CCCeEEEecCC--CCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC---cEEEEEcCCCCCC
Q psy10348        188 KS-CENCIICWKPG--RLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG---RTYVWDLDVQDPS  261 (291)
Q Consensus       188 ~~-~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~  261 (291)
                      .+ .++...+|.+.  .+..          ..+ .+.+  ...  ....++|||++|+..+.++   .|.+||+.+++. 
T Consensus       301 ~s~~~g~~~Iy~~~~~~g~~----------~~l-t~~g--~~~--~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~-  364 (427)
T PRK02889        301 TSDRGGAPQIYRMPASGGAA----------QRV-TFTG--SYN--TSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV-  364 (427)
T ss_pred             EecCCCCcEEEEEECCCCce----------EEE-ecCC--CCc--CceEECCCCCEEEEEEccCCcEEEEEEECCCCCe-
Confidence            44 35666666543  3221          111 1221  111  1345678899998877554   699999988742 


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+.. .  .......|+|||+.|+
T Consensus       365 ----~~lt~-~--~~~~~p~~spdg~~l~  386 (427)
T PRK02889        365 ----TALTD-T--TRDESPSFAPNGRYIL  386 (427)
T ss_pred             ----EEccC-C--CCccCceECCCCCEEE
Confidence                22221 1  2346789999999886

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=5.3e-13  Score=109.26  Aligned_cols=215  Identities=11%  Similarity=0.055  Sum_probs=135.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEec---CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCe--E
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAG---SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHT--L   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~--i   81 (291)
                      .+.+.+.+.+|+||++    .|+..+   .+..|.+||+.+++.. .+..+.+.+...+|+| +++.|+ +.+.++.  |
T Consensus       199 ~~~~~v~~p~wSpDG~----~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SP-DG~~la~~~~~~g~~~I  272 (435)
T PRK05137        199 DGSSLVLTPRFSPNRQ----EITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSP-DGRKVVMSLSQGGNTDI  272 (435)
T ss_pred             cCCCCeEeeEECCCCC----EEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECC-CCCEEEEEEecCCCceE
Confidence            4567899999999984    666654   3468999999887653 4555667788899999 777654 5565655  7


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      .+||+.++.... +   ..+........|+|+|+.|+..+. +|  .|.++|+..++... +.                 
T Consensus       273 y~~d~~~~~~~~-L---t~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt-----------------  330 (435)
T PRK05137        273 YTMDLRSGTTTR-L---TDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-IS-----------------  330 (435)
T ss_pred             EEEECCCCceEE-c---cCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-ee-----------------
Confidence            777988766543 3   355566778999999998887764 33  57777876554321 11                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                 .+...+....|+  |+.|+....+   ..|.+||+.....             ..+... ..+  -..+
T Consensus       331 -----------~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-------------~~lt~~-~~~--~~p~  383 (435)
T PRK05137        331 -----------FGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-------------RILTSG-FLV--EGPT  383 (435)
T ss_pred             -----------cCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-------------EeccCC-CCC--CCCe
Confidence                       012234455676  6666655432   4688888754432             111111 112  2345


Q ss_pred             ecCCCcEEEEEcCC------CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        234 MDYWQKILAVGNQS------GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       234 ~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ++|||++|+..+.+      ..+.++|+..+..     ..+..   .+.+...+|+|-
T Consensus       384 ~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-----~~l~~---~~~~~~p~Wsp~  433 (435)
T PRK05137        384 WAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-----REVPT---PGDASDPAWSPL  433 (435)
T ss_pred             ECCCCCEEEEEEccCCCCCcceEEEEECCCCce-----EEccC---CCCccCcccCCC
Confidence            66889988775542      2578888876532     22222   235677888874

>KOG2139|consensus

Probab=99.60  E-value=1.6e-13  Score=102.55  Aligned_cols=194  Identities=13%  Similarity=0.195  Sum_probs=129.1

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCch
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~  135 (291)
                      -.+..++|++ .-..+|++..|-.|++||-.. ++...++  ......|.|++|-|.+. .|+.|+. +-|.+|.....-
T Consensus        99 ~dlr~~aWhq-H~~~fava~nddvVriy~kss-t~pt~Lk--s~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tl  173 (445)
T KOG2139|consen   99 IDLRGVAWHQ-HIIAFAVATNDDVVRIYDKSS-TCPTKLK--SVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTL  173 (445)
T ss_pred             cceeeEeech-hhhhhhhhccCcEEEEeccCC-CCCceec--chhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccc
Confidence            4678899999 667889999999999999776 5555553  34557899999999765 5666665 559999875432


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCCCCccccccCCC
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGRLEDKELRTNET  212 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~  212 (291)
                      .......              ........+....+| .+|++++|+  |..+++++. |..|++||..++...       
T Consensus       174 n~~r~~~--------------~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~-------  231 (445)
T KOG2139|consen  174 NANRNIR--------------MMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKI-------  231 (445)
T ss_pred             ccccccc--------------cccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcc-------
Confidence            2211100              000011112222345 789999998  667777776 789999999988653       


Q ss_pred             ceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        213 NVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       213 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                         ++.  ....+.+.-+.|+  ||+.+|++++-|+..++|+.....      ......-..+.|....|+|+|++|+
T Consensus       232 ---pL~--~~glgg~slLkwS--Pdgd~lfaAt~davfrlw~e~q~w------t~erw~lgsgrvqtacWspcGsfLL  296 (445)
T KOG2139|consen  232 ---PLI--PKGLGGFSLLKWS--PDGDVLFAATCDAVFRLWQENQSW------TKERWILGSGRVQTACWSPCGSFLL  296 (445)
T ss_pred             ---ccc--ccCCCceeeEEEc--CCCCEEEEecccceeeeehhcccc------eecceeccCCceeeeeecCCCCEEE
Confidence               122  1223344455554  669999999999999999655432      1111112235899999999999875

>KOG4497|consensus

Probab=99.60  E-value=4.9e-14  Score=104.01  Aligned_cols=260  Identities=12%  Similarity=0.174  Sum_probs=164.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC-cEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF-NLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +.|.-+.|..+..   ..|.....++.|.+|++...+-...+..-...+.+++|+| +| .+|.+...+-+|.+|.+.+.
T Consensus        49 dki~yieW~ads~---~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSP-dgrhiL~tseF~lriTVWSL~t~  124 (447)
T KOG4497|consen   49 DKIVYIEWKADSC---HILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSP-DGRHILLTSEFDLRITVWSLNTQ  124 (447)
T ss_pred             HHhhheeeeccce---eeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECC-CcceEeeeecceeEEEEEEeccc
Confidence            4566677887765   5677778999999999998888888887788999999999 66 66777788999999999876


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc---EEEEeccCchhhhhhc------cccccCCCCccccccCccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS---LKLWDLTKPEIKDACA------ESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~---i~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  160 (291)
                      +....    +..+..+..++|+|+|++.+.++.-..   +.+........++.+.      ..+.++|++.....-....
T Consensus       125 ~~~~~----~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~L  200 (447)
T KOG4497|consen  125 KGYLL----PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL  200 (447)
T ss_pred             eeEEe----cccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchh
Confidence            65443    345566789999999999888876321   2222222222333332      2567788876544322222


Q ss_pred             cCccccccccc-CcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc--------------------------------
Q psy10348        161 HFPQFSTRDIH-RNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK--------------------------------  205 (291)
Q Consensus       161 ~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~--------------------------------  205 (291)
                      ....+   ..| .-.+..+.|+  +++++.|+.|+.+++.+--+.+..                                
T Consensus       201 eykv~---aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cL  277 (447)
T KOG4497|consen  201 EYKVY---AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCL  277 (447)
T ss_pred             hheee---eeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhccccc
Confidence            11111   112 2457888888  789999999999988653222211                                


Q ss_pred             ccccC-------CCc---------eeeeee------ecCCcccEEEEEEEecCCCcEEEEEcC--CCcEEEEEcCCCCCC
Q psy10348        206 ELRTN-------ETN---------VTIINR------LNFKDCEIWFIRFSMDYWQKILAVGNQ--SGRTYVWDLDVQDPS  261 (291)
Q Consensus       206 ~~~~~-------~~~---------~~~~~~------~~~~~~~i~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~  261 (291)
                      .+.+.       ...         ...++.      +......+.  .+++++|..++++-.+  -+.+-+||+.+.+. 
T Consensus       278 sf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g--~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l-  354 (447)
T KOG4497|consen  278 SFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAG--KLAFSCDSTYAATRNDKYPNALWLWDLQNLKL-  354 (447)
T ss_pred             ccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccc--eeeecCCceEEeeecCCCCceEEEEechhhhh-
Confidence            00000       000         001111      112222333  4555677999988763  36799999998642 


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                         ...+..   ..+|+...|+|....|+
T Consensus       355 ---~avLiQ---k~piraf~WdP~~prL~  377 (447)
T KOG4497|consen  355 ---HAVLIQ---KHPIRAFEWDPGRPRLV  377 (447)
T ss_pred             ---hhhhhh---ccceeEEEeCCCCceEE
Confidence               122222   24788888888766654

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=3.4e-13  Score=110.23  Aligned_cols=197  Identities=18%  Similarity=0.162  Sum_probs=124.8

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---CeEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      ..|.+||.. +...+.+..+...+...+|+| +++.|+..+.+   ..|.+||+.+++....    ....+...+..|+|
T Consensus       184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~~l----~~~~g~~~~~~~Sp  257 (433)
T PRK04922        184 YALQVADSD-GYNPQTILRSAEPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRELV----ASFRGINGAPSFSP  257 (433)
T ss_pred             EEEEEECCC-CCCceEeecCCCccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEEEe----ccCCCCccCceECC
Confidence            469999986 444455666778899999999 88888877643   4699999987765433    23344456789999


Q ss_pred             CCCEEE-EEecCC--cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE
Q psy10348        113 LGTKIM-SCGMDH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS  187 (291)
Q Consensus       113 ~~~~l~-~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  187 (291)
                      +|+.|+ +.+.+|  .|++||+.+++.....                             .+.......+|+  |+.|+.
T Consensus       258 DG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt-----------------------------~~~~~~~~~~~spDG~~l~f  308 (433)
T PRK04922        258 DGRRLALTLSRDGNPEIYVMDLGSRQLTRLT-----------------------------NHFGIDTEPTWAPDGKSIYF  308 (433)
T ss_pred             CCCEEEEEEeCCCCceEEEEECCCCCeEECc-----------------------------cCCCCccceEECCCCCEEEE
Confidence            999775 445555  5899999877632211                             122233456777  666665


Q ss_pred             ec-CCCe--EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC---cEEEEEcCCCCCC
Q psy10348        188 KS-CENC--IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG---RTYVWDLDVQDPS  261 (291)
Q Consensus       188 ~~-~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~  261 (291)
                      .+ .++.  |.++|+.+++.             ..+.......  ...+++|||++|+..+.++   .|.+||+.+++. 
T Consensus       309 ~sd~~g~~~iy~~dl~~g~~-------------~~lt~~g~~~--~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~-  372 (433)
T PRK04922        309 TSDRGGRPQIYRVAASGGSA-------------ERLTFQGNYN--ARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV-  372 (433)
T ss_pred             EECCCCCceEEEEECCCCCe-------------EEeecCCCCc--cCEEECCCCCEEEEEECCCCceeEEEEECCCCCe-
Confidence            54 3444  66666655432             1111111111  1346678899998765433   699999987642 


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+..   ........|+|||++|+
T Consensus       373 ----~~Lt~---~~~~~~p~~spdG~~i~  394 (433)
T PRK04922        373 ----RTLTP---GSLDESPSFAPNGSMVL  394 (433)
T ss_pred             ----EECCC---CCCCCCceECCCCCEEE
Confidence                22221   12345679999999875

>KOG0280|consensus

Probab=99.59  E-value=5.6e-13  Score=96.90  Aligned_cols=210  Identities=15%  Similarity=0.105  Sum_probs=144.5

Q ss_pred             CCeEEEEccCCcceeE--EEe-eeccceeEEEEec--CCCc-EEEEeecCCeEEEEECCCcceeeeeccccCCCC---ce
Q psy10348         35 RAVIRIFSPAFHACVR--HFY-GHGHAINELKFHP--QDFN-LLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD---EV  105 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~--~~~-~~~~~v~~~~~~~--~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~i  105 (291)
                      .|.+.+|++...+...  .++ .-+..+..+.|.-  .++. .++-+..+|.|.++..........++.+....-   ..
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~  124 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA  124 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence            4788899887665433  222 2345677788853  3555 566677889999998765555445533333222   24


Q ss_pred             EEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---C
Q psy10348        106 LSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---G  182 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~  182 (291)
                      .++.|++.+..++++-.+|.+.+-+........                          ....+.|+-.+....|+   +
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~--------------------------vq~wk~He~E~Wta~f~~~~p  178 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEK--------------------------VQTWKVHEFEAWTAKFSDKEP  178 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeee--------------------------cccccccceeeeeeecccCCC
Confidence            578899999999999999999865544433221                          12234588888888887   7


Q ss_pred             CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        183 DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      +++++|+.|+.+..||++....          ...+..+.|...|.++.-++ |.+.++++|+.|-.|++||.++...  
T Consensus       179 nlvytGgDD~~l~~~D~R~p~~----------~i~~n~kvH~~GV~SI~ss~-~~~~~I~TGsYDe~i~~~DtRnm~k--  245 (339)
T KOG0280|consen  179 NLVYTGGDDGSLSCWDIRIPKT----------FIWHNSKVHTSGVVSIYSSP-PKPTYIATGSYDECIRVLDTRNMGK--  245 (339)
T ss_pred             ceEEecCCCceEEEEEecCCcc----------eeeecceeeecceEEEecCC-CCCceEEEeccccceeeeehhcccC--
Confidence            7999999999999999994432          11233455777777776655 5789999999999999999996542  


Q ss_pred             ceeEEEeccccccceeeeEEccCCc
Q psy10348        263 IKFQILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                          .+......+.|+.+.++|.-.
T Consensus       246 ----Pl~~~~v~GGVWRi~~~p~~~  266 (339)
T KOG0280|consen  246 ----PLFKAKVGGGVWRIKHHPEIF  266 (339)
T ss_pred             ----ccccCccccceEEEEecchhh
Confidence                222223447899999998643

>KOG2111|consensus

Probab=99.59  E-value=5.1e-12  Score=92.97  Aligned_cols=163  Identities=11%  Similarity=0.170  Sum_probs=120.1

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC-CcceeEEEeeeccceeEEEEecCCCc-EEEE-eecCCeE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-FHACVRHFYGHGHAINELKFHPQDFN-LLLS-VSKDHTL   81 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s-~~~dg~i   81 (291)
                      .++.-..+|.++.+.++      .+++.- .+.|.||... +.+.++.+.....|=--++..|.... +||- |-.-|.|
T Consensus        89 ~el~f~~~I~~V~l~r~------riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~Gqv  161 (346)
T KOG2111|consen   89 IELSFNSEIKAVKLRRD------RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQV  161 (346)
T ss_pred             EEEEeccceeeEEEcCC------eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceE
Confidence            34556788888888877      455544 4689999987 45666666543322223344443333 3333 4556899


Q ss_pred             EEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEecCCc-EEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS-LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      +|-|+...+.  ...+   ..|...|.|++.+.+|..+||++..|+ |||||.++++.+.++....              
T Consensus       162 Qi~dL~~~~~~~p~~I---~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~--------------  224 (346)
T KOG2111|consen  162 QIVDLASTKPNAPSII---NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV--------------  224 (346)
T ss_pred             EEEEhhhcCcCCceEE---EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC--------------
Confidence            9999976554  3444   799999999999999999999999998 6999999999887765321              


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                                  ..+.|.+++|+  ..+|++++.-|++++|.++...
T Consensus       225 ------------d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  225 ------------DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             ------------chheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence                        45669999999  6699999999999999987643

>KOG4547|consensus

Probab=99.55  E-value=6.1e-13  Score=105.25  Aligned_cols=175  Identities=14%  Similarity=0.132  Sum_probs=134.9

Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEc------c--------------CCCEEEEEecCCcEE
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD------L--------------LGTKIMSCGMDHSLK  127 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~------~--------------~~~~l~~~~~d~~i~  127 (291)
                      ...++|....||.+++||...++....+.....-.+...+..|.      |              +-..++-|...|.|.
T Consensus         4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~   83 (541)
T KOG4547|consen    4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVL   83 (541)
T ss_pred             hhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEE
Confidence            56789999999999999999888777764433444555566552      2              223677788899999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      +|++..++....+..                          ..|.+.|.++.++  -..|.+++.|+.+..|+...... 
T Consensus        84 ~ys~~~g~it~~~st--------------------------~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~-  136 (541)
T KOG4547|consen   84 LYSVAGGEITAKLST--------------------------DKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVI-  136 (541)
T ss_pred             EEEecCCeEEEEEec--------------------------CCCCCcceeeecccccCceEecCCceeEEEEeccccee-
Confidence            999999887665542                          3499999999998  45899999999999999987743 


Q ss_pred             ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        206 ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                                 +..+......+..++  ++||++.+++++  +.|++||+++.+      .....++|.++|++++|..+
T Consensus       137 -----------~~~~~~~~~~~~sl~--is~D~~~l~~as--~~ik~~~~~~ke------vv~~ftgh~s~v~t~~f~~~  195 (541)
T KOG4547|consen  137 -----------IRIWKEQKPLVSSLC--ISPDGKILLTAS--RQIKVLDIETKE------VVITFTGHGSPVRTLSFTTL  195 (541)
T ss_pred             -----------eeeeccCCCccceEE--EcCCCCEEEecc--ceEEEEEccCce------EEEEecCCCcceEEEEEEEe
Confidence                       666666665555554  456699999997  579999999985      45556699999999999887


Q ss_pred             -----Cceee
Q psy10348        286 -----GNVLL  290 (291)
Q Consensus       286 -----g~~l~  290 (291)
                           |.+++
T Consensus       196 ~~g~~G~~vL  205 (541)
T KOG4547|consen  196 IDGIIGKYVL  205 (541)
T ss_pred             ccccccceee
Confidence                 66664

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.55  E-value=3.2e-12  Score=101.33  Aligned_cols=251  Identities=12%  Similarity=0.079  Sum_probs=134.5

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee-cCCeEEEEECCCcce
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS-KDHTLRLWNIKTDIC   91 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~   91 (291)
                      ...+.|+||+    +++++++.||.|.++|+.+++.+++++.- .....+++++ +++++++++ .++.+.++|.++.+.
T Consensus        39 h~~~~~s~Dg----r~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~~s~-DG~~~~v~n~~~~~v~v~D~~tle~  112 (369)
T PF02239_consen   39 HAGLKFSPDG----RYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIAVSP-DGKYVYVANYEPGTVSVIDAETLEP  112 (369)
T ss_dssp             EEEEE-TT-S----SEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEEE---TTTEEEEEEEETTEEEEEETTT--E
T ss_pred             eeEEEecCCC----CEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEEEcC-CCCEEEEEecCCCceeEeccccccc
Confidence            3456788888    58999999999999999999999999854 4468899999 888888765 689999999999888


Q ss_pred             eeeeccc----cCCCCceEEEEEccCCCEEEEEecC-CcEEEEeccCch-------hhhhhccccccCCCCcccccc---
Q psy10348         92 IAIFGGV----EGHRDEVLSADFDLLGTKIMSCGMD-HSLKLWDLTKPE-------IKDACAESYTFNPARSTRPFD---  156 (291)
Q Consensus        92 ~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~---  156 (291)
                      ++.+...    .....++..+..+|....++..-.| +.|.+.|....+       ....+.....+.|++......   
T Consensus       113 v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~  192 (369)
T PF02239_consen  113 VKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANG  192 (369)
T ss_dssp             EEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGG
T ss_pred             eeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccc
Confidence            8766321    0123456667667776655555443 666666644321       123333444555554322111   


Q ss_pred             --------CccccCcc-cc-cccccCcceeEE-------EEc----CCEEEEecCCCeEEEecCCCCCccccccCCCcee
Q psy10348        157 --------TQKEHFPQ-FS-TRDIHRNYVDCV-------RWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVT  215 (291)
Q Consensus       157 --------~~~~~~~~-~~-~~~~~~~~v~~~-------~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  215 (291)
                              ........ +. ....|..+...+       .|.    +...++.-....+.+||....+            
T Consensus       193 sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wk------------  260 (369)
T PF02239_consen  193 SNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWK------------  260 (369)
T ss_dssp             GTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTS------------
T ss_pred             cceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCe------------
Confidence                    00000000 00 011122222221       121    2232222223455567777664            


Q ss_pred             eeeeecCCcccEEEEEEEecCCCcEEEEE----cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        216 IINRLNFKDCEIWFIRFSMDYWQKILAVG----NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       216 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      .++++.....+ -.+  ..+|+++++++.    ...++|.++|..+.+.    ...+.. +-...+..+.|++||+++
T Consensus       261 vv~~I~~~G~g-lFi--~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~----~~~i~~-~~~~~~~h~ef~~dG~~v  330 (369)
T PF02239_consen  261 VVKTIPTQGGG-LFI--KTHPDSRYVWVDTFLNPDADTVQVIDKKTLKV----VKTITP-GPGKRVVHMEFNPDGKEV  330 (369)
T ss_dssp             EEEEEE-SSSS---E--E--TT-SEEEEE-TT-SSHT-EEEEECCGTEE----EE-HHH-HHT--EEEEEE-TTSSEE
T ss_pred             EEEEEECCCCc-cee--ecCCCCccEEeeccCCCCCceEEEEECcCcce----eEEEec-cCCCcEeccEECCCCCEE
Confidence            47777776665 333  446889999998    4568999999998731    122221 112348899999999976

...

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.55  E-value=4.8e-12  Score=103.59  Aligned_cols=197  Identities=17%  Similarity=0.127  Sum_probs=123.5

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---CeEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      ..|.++|... ...+.+..+...+...+|+| ++++|+.+..+   ..|++||+.+++.....    .+...+.+..|+|
T Consensus       170 ~~l~~~d~~g-~~~~~l~~~~~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~~~----~~~~~~~~~~~sp  243 (417)
T TIGR02800       170 YELQVADYDG-ANPQTITRSREPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREKVA----SFPGMNGAPAFSP  243 (417)
T ss_pred             ceEEEEcCCC-CCCEEeecCCCceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEee----cCCCCccceEECC
Confidence            4688888763 33455656677789999999 88888876644   47999999987654432    4555667789999


Q ss_pred             CCCEEEE-EecCC--cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE
Q psy10348        113 LGTKIMS-CGMDH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS  187 (291)
Q Consensus       113 ~~~~l~~-~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  187 (291)
                      +|+.|+. .+.++  .|.+||+.++.......                             +........|+  ++.|+.
T Consensus       244 Dg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~-----------------------------~~~~~~~~~~s~dg~~l~~  294 (417)
T TIGR02800       244 DGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTN-----------------------------GPGIDTEPSWSPDGKSIAF  294 (417)
T ss_pred             CCCEEEEEECCCCCccEEEEECCCCCEEECCC-----------------------------CCCCCCCEEECCCCCEEEE
Confidence            9987764 44444  58888887765321110                             12222334565  666655


Q ss_pred             ecC-CC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC---cEEEEEcCCCCCC
Q psy10348        188 KSC-EN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG---RTYVWDLDVQDPS  261 (291)
Q Consensus       188 ~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~  261 (291)
                      .+. ++  .|.++|+.+.+.             ..+..+....  ....++|++++++.++.++   .|.+||+.++.. 
T Consensus       295 ~s~~~g~~~iy~~d~~~~~~-------------~~l~~~~~~~--~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-  358 (417)
T TIGR02800       295 TSDRGGSPQIYMMDADGGEV-------------RRLTFRGGYN--ASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-  358 (417)
T ss_pred             EECCCCCceEEEEECCCCCE-------------EEeecCCCCc--cCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-
Confidence            443 33  577777765432             1222222222  2345678899999888775   788999887532 


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+...   ......+|+|||++|+
T Consensus       359 ----~~l~~~---~~~~~p~~spdg~~l~  380 (417)
T TIGR02800       359 ----RVLTDT---GLDESPSFAPNGRMIL  380 (417)
T ss_pred             ----EEccCC---CCCCCceECCCCCEEE
Confidence                222211   1234568999999876

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG4497|consensus

Probab=99.54  E-value=6.2e-12  Score=93.11  Aligned_cols=250  Identities=12%  Similarity=0.175  Sum_probs=155.9

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec------------
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK------------   77 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------------   77 (291)
                      ..++.+++|||++.   .+|.+..-+-.|.||.+.+.+.. .++..+..+..++|+| ++++.+.++.            
T Consensus        91 ~agls~~~WSPdgr---hiL~tseF~lriTVWSL~t~~~~-~~~~pK~~~kg~~f~~-dg~f~ai~sRrDCkdyv~i~~c  165 (447)
T KOG4497|consen   91 QAGLSSISWSPDGR---HILLTSEFDLRITVWSLNTQKGY-LLPHPKTNVKGYAFHP-DGQFCAILSRRDCKDYVQISSC  165 (447)
T ss_pred             CCcceeeeECCCcc---eEeeeecceeEEEEEEeccceeE-EecccccCceeEEECC-CCceeeeeecccHHHHHHHHhh
Confidence            57889999999995   57888888999999999876643 3343455678899999 8888776642            


Q ss_pred             ------------------------CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         78 ------------------------DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        78 ------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                                              +..+.+||---.-.+..+    .-.-.+..++|+|.+++|+.|+.|+.+|+.+--+
T Consensus       166 ~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aY----e~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~t  241 (447)
T KOG4497|consen  166 KAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAY----ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFT  241 (447)
T ss_pred             HHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeee----eeccceeEEEeccccceEEeeccchhhhhhceee
Confidence                                    122444442211111111    2336788999999999999999999999876544


Q ss_pred             chhhhhhc-------------------------cccccCCCCccc-cccCcc---------ccCcccc---cccccCcce
Q psy10348        134 PEIKDACA-------------------------ESYTFNPARSTR-PFDTQK---------EHFPQFS---TRDIHRNYV  175 (291)
Q Consensus       134 ~~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~---------~~~~~~~---~~~~~~~~v  175 (291)
                      .+....+.                         ....|.|..... ++....         ...+...   ........+
T Consensus       242 Wk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~  321 (447)
T KOG4497|consen  242 WKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGA  321 (447)
T ss_pred             eeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccccc
Confidence            43332221                         123343332111 111100         0000001   111124557


Q ss_pred             eEEEEc--CCEEEEecC--CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEE
Q psy10348        176 DCVRWL--GDFVLSKSC--ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTY  251 (291)
Q Consensus       176 ~~~~~~--~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~  251 (291)
                      .-++|+  ..++++-..  -+.+-+||++..+.             ...-....+  +.++.++|....|+.+.....++
T Consensus       322 g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l-------------~avLiQk~p--iraf~WdP~~prL~vctg~srLY  386 (447)
T KOG4497|consen  322 GKLAFSCDSTYAATRNDKYPNALWLWDLQNLKL-------------HAVLIQKHP--IRAFEWDPGRPRLVVCTGKSRLY  386 (447)
T ss_pred             ceeeecCCceEEeeecCCCCceEEEEechhhhh-------------hhhhhhccc--eeEEEeCCCCceEEEEcCCceEE
Confidence            788998  345555443  35799999988653             222222333  34577788888888888888899


Q ss_pred             EEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        252 VWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       252 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|.....       .....++..-.|..+.|..+|..++
T Consensus       387 ~W~psg~-------~~V~vP~~GF~i~~l~W~~~g~~i~  418 (447)
T KOG4497|consen  387 FWAPSGP-------RVVGVPKKGFNIQKLQWLQPGEFIV  418 (447)
T ss_pred             EEcCCCc-------eEEecCCCCceeeeEEecCCCcEEE
Confidence            9988764       3333334446789999999998775

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.54  E-value=5.4e-12  Score=103.29  Aligned_cols=195  Identities=15%  Similarity=0.102  Sum_probs=121.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCC---CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCC--eE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSR---AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDH--TL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg--~i   81 (291)
                      .+...+.+.+|+|++    ++|+.+..+   ..|++||+.+++... +..+.+.+.+++|+| +++.|+ +.+.++  .|
T Consensus       187 ~~~~~~~~p~~Spdg----~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~i  260 (417)
T TIGR02800       187 RSREPILSPAWSPDG----QKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSP-DGSKLAVSLSKDGNPDI  260 (417)
T ss_pred             cCCCceecccCCCCC----CEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECC-CCCEEEEEECCCCCccE
Confidence            345567888899998    477776543   479999998876543 334556677899999 777655 445444  58


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      .+||+.++.....    ..+........|+|+|+.|+..+. ++  .|.++|+.+++... +.                 
T Consensus       261 ~~~d~~~~~~~~l----~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~-----------------  318 (417)
T TIGR02800       261 YVMDLDGKQLTRL----TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR-LT-----------------  318 (417)
T ss_pred             EEEECCCCCEEEC----CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-ee-----------------
Confidence            8899887654433    244444556789999998876654 33  46777776554211 10                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCC---eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN---CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                 .+........|+  +++++..+.++   .|.+||+.+....          .+   ..... .  ....
T Consensus       319 -----------~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~----------~l---~~~~~-~--~~p~  371 (417)
T TIGR02800       319 -----------FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER----------VL---TDTGL-D--ESPS  371 (417)
T ss_pred             -----------cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE----------Ec---cCCCC-C--CCce
Confidence                       022334556676  66777777665   7888998764321          11   11111 1  1234


Q ss_pred             ecCCCcEEEEEcCCC---cEEEEEcCC
Q psy10348        234 MDYWQKILAVGNQSG---RTYVWDLDV  257 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg---~i~vwd~~~  257 (291)
                      ++|++++|+..+.++   .+++.+...
T Consensus       372 ~spdg~~l~~~~~~~~~~~l~~~~~~g  398 (417)
T TIGR02800       372 FAPNGRMILYATTRGGRGVLGLVSTDG  398 (417)
T ss_pred             ECCCCCEEEEEEeCCCcEEEEEEECCC
Confidence            567799888877654   355555443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.54  E-value=1.7e-11  Score=97.19  Aligned_cols=193  Identities=15%  Similarity=0.081  Sum_probs=126.2

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS  107 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~  107 (291)
                      ++++-..+|.|.+.|.++.+.+..+......-..+.|+| |++++++++.||.|.++|+.+++.+..+    .-.....+
T Consensus         8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i----~~G~~~~~   82 (369)
T PF02239_consen    8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSP-DGRYLYVANRDGTVSVIDLATGKVVATI----KVGGNPRG   82 (369)
T ss_dssp             EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT--SSEEEEEETTSEEEEEETTSSSEEEEE----E-SSEEEE
T ss_pred             EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecC-CCCEEEEEcCCCeEEEEECCcccEEEEE----ecCCCcce
Confidence            335566789999999999999999986555445578899 9999999999999999999999999888    33456788


Q ss_pred             EEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CC-
Q psy10348        108 ADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-  183 (291)
Q Consensus       108 ~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-  183 (291)
                      ++++++|++++++. .++.+.++|.++.+.++.+.....-                     .......+.++..+  .. 
T Consensus        83 i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~---------------------~~~~~~Rv~aIv~s~~~~~  141 (369)
T PF02239_consen   83 IAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMP---------------------VDGPESRVAAIVASPGRPE  141 (369)
T ss_dssp             EEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE----------------------TTTS---EEEEEE-SSSSE
T ss_pred             EEEcCCCCEEEEEecCCCceeEeccccccceeeccccccc---------------------ccccCCCceeEEecCCCCE
Confidence            99999999998776 5899999999999887765421000                     00123445566554  33 


Q ss_pred             EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCCC
Q psy10348        184 FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQD  259 (291)
Q Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~  259 (291)
                      ++++--..+.|.+-|.......          ....+.....   .-...++|+++|++++ ..++.|-++|..+++
T Consensus       142 fVv~lkd~~~I~vVdy~d~~~~----------~~~~i~~g~~---~~D~~~dpdgry~~va~~~sn~i~viD~~~~k  205 (369)
T PF02239_consen  142 FVVNLKDTGEIWVVDYSDPKNL----------KVTTIKVGRF---PHDGGFDPDGRYFLVAANGSNKIAVIDTKTGK  205 (369)
T ss_dssp             EEEEETTTTEEEEEETTTSSCE----------EEEEEE--TT---EEEEEE-TTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred             EEEEEccCCeEEEEEecccccc----------ceeeeccccc---ccccccCcccceeeecccccceeEEEeeccce
Confidence            4555555688888887665331          1223322221   1235677889987665 466789999988864

...

>KOG0280|consensus

Probab=99.53  E-value=1.2e-12  Score=95.25  Aligned_cols=203  Identities=15%  Similarity=0.083  Sum_probs=135.4

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      .++.|++.+    .-++++-.+|.+.+-+.....+  ++.++.|+-++....|+..+++++.+|+.|+.+..||++... 
T Consensus       125 lslD~~~~~----~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-  199 (339)
T KOG0280|consen  125 LSLDISTSG----TKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-  199 (339)
T ss_pred             eEEEeeccC----ceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-
Confidence            455666666    4799998999999655544443  347889999999999998888999999999999999998332 


Q ss_pred             eeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ...+...+.|...|.++.-+|. +.++++|+.|..|++||.++ ++++..-.                            
T Consensus       200 ~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~----------------------------  251 (339)
T KOG0280|consen  200 TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK----------------------------  251 (339)
T ss_pred             ceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc----------------------------
Confidence            2223333679999999998875 66999999999999999995 44332211                            


Q ss_pred             ccCcceeEEEEcC---CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-
Q psy10348        170 IHRNYVDCVRWLG---DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-  245 (291)
Q Consensus       170 ~~~~~v~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-  245 (291)
                       -.+.|..+.+++   ..++.++.-+-.++-+.......       ........+.|.+-++.-+|  +....+||+++ 
T Consensus       252 -v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e-------~~~~~~s~~~hdSl~YG~DW--d~~~~~lATCsF  321 (339)
T KOG0280|consen  252 -VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLE-------FQIVLPSDKIHDSLCYGGDW--DSKDSFLATCSF  321 (339)
T ss_pred             -cccceEEEEecchhhhHHHHHHHhcCceEEEecccccc-------hheeeeccccccceeecccc--ccccceeeeeec
Confidence             235677777762   23455555555666665544221       00234555556554443333  22235688866 


Q ss_pred             CCCcEE-EEEcCCCC
Q psy10348        246 QSGRTY-VWDLDVQD  259 (291)
Q Consensus       246 ~dg~i~-vwd~~~~~  259 (291)
                      .|..++ +|-.-++.
T Consensus       322 YDk~~~~~Wl~~t~~  336 (339)
T KOG0280|consen  322 YDKKIRQLWLHITGE  336 (339)
T ss_pred             cccceeeeeeeccCC
Confidence            566655 77655543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.52  E-value=1.3e-11  Score=101.26  Aligned_cols=216  Identities=13%  Similarity=0.063  Sum_probs=128.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCC---CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCC--eE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSR---AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDH--TL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg--~i   81 (291)
                      .+.+.+...+|+|+++    .|+..+.+   ..|.+|++.+++... +....+.+....|+| +++.|+ +.+.+|  .|
T Consensus       196 ~~~~~~~~p~wSpDG~----~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~Sp-DG~~la~~~~~~g~~~I  269 (430)
T PRK00178        196 QSREPILSPRWSPDGK----RIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSP-DGSKLAFVLSKDGNPEI  269 (430)
T ss_pred             cCCCceeeeeECCCCC----EEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECC-CCCEEEEEEccCCCceE
Confidence            4567788899999985    66655432   469999998876533 333344556789999 777766 455555  58


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      .+||+.+++... +   ..+........|+|+|+.|+..+. +|  .|.++|+.+++......                 
T Consensus       270 y~~d~~~~~~~~-l---t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-----------------  328 (430)
T PRK00178        270 YVMDLASRQLSR-V---TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-----------------  328 (430)
T ss_pred             EEEECCCCCeEE-c---ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-----------------
Confidence            888998776543 3   345555667889999998776654 34  46666776665321100                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecC-CC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-EN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                  .........|+  ++.++..+. ++  .|.++|+.+++..          .+.......      ...
T Consensus       329 ------------~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~----------~lt~~~~~~------~p~  380 (430)
T PRK00178        329 ------------VGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR----------ILTDTSLDE------SPS  380 (430)
T ss_pred             ------------CCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE----------EccCCCCCC------Cce
Confidence                        00111233455  566655443 33  5788888776431          121111111      235


Q ss_pred             ecCCCcEEEEEcCC---CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        234 MDYWQKILAVGNQS---GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       234 ~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      ++|||++++..+.+   ..|.++++.....     ..+.  ...+.+...+|+|-
T Consensus       381 ~spdg~~i~~~~~~~g~~~l~~~~~~g~~~-----~~l~--~~~g~~~~p~ws~~  428 (430)
T PRK00178        381 VAPNGTMLIYATRQQGRGVLMLVSINGRVR-----LPLP--TAQGEVREPSWSPY  428 (430)
T ss_pred             ECCCCCEEEEEEecCCceEEEEEECCCCce-----EECc--CCCCCcCCCccCCC
Confidence            66889998877643   3467777754321     2222  23356777888874

>KOG3881|consensus

Probab=99.51  E-value=2.4e-12  Score=97.12  Aligned_cols=237  Identities=13%  Similarity=0.129  Sum_probs=163.3

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE------eeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF------YGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ....+..++|..+++  ...+...+.+..+..+..+.......+      .....+|..++...   ..|++|-.+|.+.
T Consensus        54 ~~~ris~l~~~~d~~--tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~d---g~Litc~~sG~l~  128 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGE--TEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLAD---GTLITCVSSGNLQ  128 (412)
T ss_pred             hhhhhhhheeecCCc--eeEeeccccCcccccccccCCccccccccccccccccccccchhhcC---CEEEEEecCCcEE
Confidence            346777888886654  234555546667777776655544332      33456777776653   4778888899999


Q ss_pred             EEECCCcc----eeeeeccccCCCCceEEEEEccCCC-EEEEEecC--CcEEEEeccCchhhhhhccccccCCCCccccc
Q psy10348         83 LWNIKTDI----CIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMD--HSLKLWDLTKPEIKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        83 vwd~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~  155 (291)
                      +|..+.+.    .+..+    .....+..+.-++... .+++|+..  ..+.+||++..+.+..-+.          ++-
T Consensus       129 ~~~~k~~d~hss~l~~l----a~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKN----------vpn  194 (412)
T KOG3881|consen  129 VRHDKSGDLHSSKLIKL----ATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKN----------VPN  194 (412)
T ss_pred             EEeccCCccccccceee----ecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccC----------CCC
Confidence            99988443    22222    2335566666666655 45568888  8899999998854433211          111


Q ss_pred             cCccccCcccccccccCcceeEEEEc-C---CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL-G---DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                      +.+...         -+-.++.+.|- +   ..|++++.-+.+++||.+.++.           ++..+.....++.++.
T Consensus       195 D~L~Lr---------VPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR-----------PV~~fd~~E~~is~~~  254 (412)
T KOG3881|consen  195 DRLGLR---------VPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR-----------PVAQFDFLENPISSTG  254 (412)
T ss_pred             ccccce---------eeeeeccceecCCCCCceEEEEecceeEEEecCcccCc-----------ceeEeccccCcceeee
Confidence            111111         23346677776 3   4899999999999999997764           4888888888888887


Q ss_pred             EEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        232 FSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       232 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..++  ++++++|..-|.+..||++.++..     .....+..+.|+++..+|.+++||+
T Consensus       255 l~p~--gn~Iy~gn~~g~l~~FD~r~~kl~-----g~~~kg~tGsirsih~hp~~~~las  307 (412)
T KOG3881|consen  255 LTPS--GNFIYTGNTKGQLAKFDLRGGKLL-----GCGLKGITGSIRSIHCHPTHPVLAS  307 (412)
T ss_pred             ecCC--CcEEEEecccchhheecccCceee-----ccccCCccCCcceEEEcCCCceEEe
Confidence            7755  999999999999999999998532     1123467789999999999999875

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.50  E-value=1.8e-11  Score=100.20  Aligned_cols=215  Identities=14%  Similarity=0.023  Sum_probs=123.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecC-C--CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCe--EE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGS-R--AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHT--LR   82 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~-d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~--i~   82 (291)
                      ..+.+.+..|+||++    .|+..+. +  ..|.+||+.+++... +....+......|+| +++.|+ +.+.+|.  |.
T Consensus       216 ~~~~~~~p~wSPDG~----~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSP-DG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        216 SPEPLMSPAWSPDGR----KLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSP-DGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             CCCcccCceECCCCC----EEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECC-CCCEEEEEEeCCCCeEEE
Confidence            345677889999985    6665543 3  368899998876432 322233445789999 777665 4566665  77


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCc--EEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHS--LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      ++|+.+++... +   ..+........|+|+|+.|+..+. ++.  |.++|+.+++......                  
T Consensus       290 ~~dl~tg~~~~-l---t~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~------------------  347 (448)
T PRK04792        290 VVDIATKALTR-I---TRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTF------------------  347 (448)
T ss_pred             EEECCCCCeEE-C---ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEec------------------
Confidence            78888766443 3   345556678899999998876554 444  5556666554321100                  


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecC-CC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-EN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                                 .........|+  |++++..+. ++  .|.++|+.++...          .+   .....   ....++
T Consensus       348 -----------~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~----------~l---t~~~~---d~~ps~  400 (448)
T PRK04792        348 -----------EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ----------VL---TSTRL---DESPSV  400 (448)
T ss_pred             -----------CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE----------Ec---cCCCC---CCCceE
Confidence                       01111233555  566555443 34  4555677665431          11   11100   012356


Q ss_pred             cCCCcEEEEEcC-CC--cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        235 DYWQKILAVGNQ-SG--RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       235 ~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      +|||++|+..+. +|  .+.+++.....     ...+.  ...+.+...+|+|-
T Consensus       401 spdG~~I~~~~~~~g~~~l~~~~~~G~~-----~~~l~--~~~g~~~~p~Wsp~  447 (448)
T PRK04792        401 APNGTMVIYSTTYQGKQVLAAVSIDGRF-----KARLP--AGQGEVKSPAWSPF  447 (448)
T ss_pred             CCCCCEEEEEEecCCceEEEEEECCCCc-----eEECc--CCCCCcCCCccCCC
Confidence            688998877654 33  36777764332     12222  23456778899883

>KOG2321|consensus

Probab=99.50  E-value=1.2e-12  Score=103.47  Aligned_cols=193  Identities=13%  Similarity=0.159  Sum_probs=143.6

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeecc---ccCCCC-
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG---VEGHRD-  103 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~-  103 (291)
                      ++++| ....|+-++++.|+.+..+....+.++++..++ ...+|++|+.+|.|..||.+....+..+..   ...|.+ 
T Consensus       148 ly~~g-sg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~-~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~  225 (703)
T KOG2321|consen  148 LYLVG-SGSEVYRLNLEQGRFLNPFETDSGELNVVSINE-EHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGG  225 (703)
T ss_pred             EEEee-cCcceEEEEccccccccccccccccceeeeecC-ccceEEecccCceEEEecchhhhhheeeecccccCCCccc
Confidence            44444 445799999999999999988889999999999 778999999999999999988766655531   122333 


Q ss_pred             ----ceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        104 ----EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       104 ----~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                          .|+++.|+.+|-.+++|+.+|.+.|||+++.+++..-.                           .+..-+|..+.
T Consensus       226 ~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd---------------------------h~~e~pi~~l~  278 (703)
T KOG2321|consen  226 DAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD---------------------------HGYELPIKKLD  278 (703)
T ss_pred             cccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc---------------------------cCCccceeeec
Confidence                49999999999999999999999999999988653322                           23456788888


Q ss_pred             Ec----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        180 WL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       180 ~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                      |.    ++.+++ .....++|||-.+++.            ....... ..+.-  +|+-|++.+++++-.++.+..|-+
T Consensus       279 ~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~------------~asiEpt-~~lND--~C~~p~sGm~f~Ane~~~m~~yyi  342 (703)
T KOG2321|consen  279 WQDTDQQNKVVS-MDKRILKIWDECTGKP------------MASIEPT-SDLND--FCFVPGSGMFFTANESSKMHTYYI  342 (703)
T ss_pred             ccccCCCceEEe-cchHHhhhcccccCCc------------eeecccc-CCcCc--eeeecCCceEEEecCCCcceeEEc
Confidence            85    234554 4468899999988855            3333322 22443  444466999999999999999888


Q ss_pred             CCCCCCccee
Q psy10348        256 DVQDPSSIKF  265 (291)
Q Consensus       256 ~~~~~~~~~~  265 (291)
                      ....+.+..+
T Consensus       343 P~LGPaPrWC  352 (703)
T KOG2321|consen  343 PSLGPAPRWC  352 (703)
T ss_pred             cccCCCchhh
Confidence            8766544443

>KOG4547|consensus

Probab=99.48  E-value=2.5e-11  Score=96.33  Aligned_cols=189  Identities=15%  Similarity=0.120  Sum_probs=147.0

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEee---eccceeEEEEe------c-------------CCCcEEEEeecCCeEEEE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYG---HGHAINELKFH------P-------------QDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~~~~v~~~~~~------~-------------~~~~~l~s~~~dg~i~vw   84 (291)
                      .++|....||.+++|+..++++.+.+..   -++..++..|.      |             .+...++-|...|.|.+|
T Consensus         6 ~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~y   85 (541)
T KOG4547|consen    6 DYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLY   85 (541)
T ss_pred             heEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEE
Confidence            6999999999999999999887776642   23445555553      2             134578888999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++..|+....+.. ..|.++|.++.++.+-..|.+++.|+.+..|+.........+..                      
T Consensus        86 s~~~g~it~~~st-~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~----------------------  142 (541)
T KOG4547|consen   86 SVAGGEITAKLST-DKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKE----------------------  142 (541)
T ss_pred             EecCCeEEEEEec-CCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeecc----------------------
Confidence            9999988877743 57999999999999999999999999999999988876655432                      


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC---Cc
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW---QK  239 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~  239 (291)
                            ....+.+++..  +..+++++  +.|++||+.+.            +.+..|.+|.+++..+.|..+-+   |.
T Consensus       143 ------~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~k------------evv~~ftgh~s~v~t~~f~~~~~g~~G~  202 (541)
T KOG4547|consen  143 ------QKPLVSSLCISPDGKILLTAS--RQIKVLDIETK------------EVVITFTGHGSPVRTLSFTTLIDGIIGK  202 (541)
T ss_pred             ------CCCccceEEEcCCCCEEEecc--ceEEEEEccCc------------eEEEEecCCCcceEEEEEEEeccccccc
Confidence                  44556777777  44777766  89999999998            44999999999999988876533   45


Q ss_pred             EEEEE-cCCCcEEEEEcCCC
Q psy10348        240 ILAVG-NQSGRTYVWDLDVQ  258 (291)
Q Consensus       240 ~l~~~-~~dg~i~vwd~~~~  258 (291)
                      ++.++ ..+.-+.+|-+...
T Consensus       203 ~vLssa~~~r~i~~w~v~~~  222 (541)
T KOG4547|consen  203 YVLSSAAAERGITVWVVEKE  222 (541)
T ss_pred             eeeeccccccceeEEEEEcc
Confidence            55544 45666888877663

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.48  E-value=3.3e-10  Score=89.92  Aligned_cols=243  Identities=15%  Similarity=0.096  Sum_probs=140.9

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecC----CCeEEEEccCCc--c--eeEEEeeeccceeEEEEecCCCcEEEEee-cCCe
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGS----RAVIRIFSPAFH--A--CVRHFYGHGHAINELKFHPQDFNLLLSVS-KDHT   80 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~----dg~i~vw~~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~   80 (291)
                      .....-++++|++    ++|.+..+    +|.|..|.+...  +  .+............++++| ++++|+++. .+|.
T Consensus        36 ~~~Ps~l~~~~~~----~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~-~g~~l~vany~~g~  110 (345)
T PF10282_consen   36 GENPSWLAVSPDG----RRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDP-DGRFLYVANYGGGS  110 (345)
T ss_dssp             SSSECCEEE-TTS----SEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECT-TSSEEEEEETTTTE
T ss_pred             CCCCceEEEEeCC----CEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEec-CCCEEEEEEccCCe
Confidence            3444567778877    47777755    579999988753  3  2333332334556799999 888888876 4899


Q ss_pred             EEEEECCC-cceeeeeccc----------cCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCC
Q psy10348         81 LRLWNIKT-DICIAIFGGV----------EGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        81 i~vwd~~~-~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      |.++++.. |.........          ........++.++|+++++++... ...|.+|++......-.....+..  
T Consensus       111 v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~--  188 (345)
T PF10282_consen  111 VSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKV--  188 (345)
T ss_dssp             EEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEEC--
T ss_pred             EEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeecccc--
Confidence            99999986 3332221100          122355789999999998887654 457999999765521000000000  


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecC---
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF---  222 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---  222 (291)
                                           .....-+.+.|+  ++++ ++...++.|.++++...... +       +.+.....   
T Consensus       189 ---------------------~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~-~-------~~~~~~~~~~~  239 (345)
T PF10282_consen  189 ---------------------PPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGS-L-------TEIQTISTLPE  239 (345)
T ss_dssp             ---------------------STTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTE-E-------EEEEEEESCET
T ss_pred             ---------------------ccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCc-e-------eEEEEeeeccc
Confidence                                 133446778887  5555 45556889999988722110 0       11222111   


Q ss_pred             -CcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCC-CCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        223 -KDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQD-PSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       223 -~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                       .........+..+|||++|+++. .++.|.+|++.... .+ ........  .....+.++++|+|++|++
T Consensus       240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l-~~~~~~~~--~G~~Pr~~~~s~~g~~l~V  308 (345)
T PF10282_consen  240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTL-TLVQTVPT--GGKFPRHFAFSPDGRYLYV  308 (345)
T ss_dssp             TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTE-EEEEEEEE--SSSSEEEEEE-TTSSEEEE
T ss_pred             cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCce-EEEEEEeC--CCCCccEEEEeCCCCEEEE
Confidence             11111344556678899988866 66789999995332 11 11122221  1234899999999999873

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG1354|consensus

Probab=99.47  E-value=4.9e-12  Score=94.14  Aligned_cols=222  Identities=14%  Similarity=0.205  Sum_probs=140.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----eeEEEeeec------------cceeEEEEecC-C
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----CVRHFYGHG------------HAINELKFHPQ-D   68 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~-~   68 (291)
                      +...+-|.++.|...|+    +||+|..+|.|.++.-+...     ....++.|+            ..|..+.|.++ +
T Consensus        22 vteadiis~vef~~~Ge----~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n   97 (433)
T KOG1354|consen   22 VTEADIISAVEFDHYGE----RLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGN   97 (433)
T ss_pred             echhcceeeEEeecccc----eEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCC
Confidence            45567899999999995    99999999999999755332     233444553            57889999872 3


Q ss_pred             CcEEEEeecCCeEEEEECCCcce-----------------------------------eeeeccccCCCCceEEEEEccC
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDIC-----------------------------------IAIFGGVEGHRDEVLSADFDLL  113 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~-----------------------------------~~~~~~~~~~~~~i~~~~~~~~  113 (291)
                      ...++....|.+|++|.+.....                                   .+.+  -..|.--|.++.++.|
T Consensus        98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~--aNaHtyhiNSIS~NsD  175 (433)
T KOG1354|consen   98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVY--ANAHTYHINSISVNSD  175 (433)
T ss_pred             ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeec--cccceeEeeeeeecCc
Confidence            34667778899999998753211                                   1111  1467778999999999


Q ss_pred             CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecC
Q psy10348        114 GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSC  190 (291)
Q Consensus       114 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~  190 (291)
                      ...++++. |-.|.+|.++-......+.   ...|..           .      ..-...|++..|+   -+.++-.+.
T Consensus       176 ~Et~lSAD-dLRINLWnlei~d~sFnIV---DIKP~n-----------m------EeLteVITsaEFhp~~cn~f~YSSS  234 (433)
T KOG1354|consen  176 KETFLSAD-DLRINLWNLEIIDQSFNIV---DIKPAN-----------M------EELTEVITSAEFHPHHCNVFVYSSS  234 (433)
T ss_pred             cceEeecc-ceeeeeccccccCCceeEE---EccccC-----------H------HHHHHHHhhhccCHhHccEEEEecC
Confidence            99988876 7889999986543221111   000100           0      0012346666776   567888888


Q ss_pred             CCeEEEecCCCCCcc----ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        191 ENCIICWKPGRLEDK----ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       191 d~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      .|+|++.|++.....    .+...........-+..--..|..+.|+  ++|+|+++-..- +|++||+.-.
T Consensus       235 KGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs--~sGryilsRDyl-tvk~wD~nme  303 (433)
T KOG1354|consen  235 KGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFS--HSGRYILSRDYL-TVKLWDLNME  303 (433)
T ss_pred             CCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEc--cCCcEEEEeccc-eeEEEecccc
Confidence            999999999854221    0000000001111122222334445555  559999987654 8999999543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=6.6e-11  Score=97.10  Aligned_cols=196  Identities=15%  Similarity=0.082  Sum_probs=119.2

Q ss_pred             eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---CeEEEEECCCcceeeeeccccCCCCceEEEEEccC
Q psy10348         37 VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL  113 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~  113 (291)
                      .|.++|.+.+. .+.+..+...+....|+| +++.|+..+.+   ..|.+||+.+++.....    ...+.+....|+|+
T Consensus       180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~l~----~~~g~~~~~~~SpD  253 (430)
T PRK00178        180 TLQRSDYDGAR-AVTLLQSREPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQIT----NFEGLNGAPAWSPD  253 (430)
T ss_pred             EEEEECCCCCC-ceEEecCCCceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEEcc----CCCCCcCCeEECCC
Confidence            47788877444 455556778899999999 88887765533   36899999887654432    33344557899999


Q ss_pred             CCEEEE-EecCC--cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe
Q psy10348        114 GTKIMS-CGMDH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK  188 (291)
Q Consensus       114 ~~~l~~-~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  188 (291)
                      |+.|+. ...+|  .|.+||+.+++... +.                            .+........|+  ++.++..
T Consensus       254 G~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt----------------------------~~~~~~~~~~~spDg~~i~f~  304 (430)
T PRK00178        254 GSKLAFVLSKDGNPEIYVMDLASRQLSR-VT----------------------------NHPAIDTEPFWGKDGRTLYFT  304 (430)
T ss_pred             CCEEEEEEccCCCceEEEEECCCCCeEE-cc----------------------------cCCCCcCCeEECCCCCEEEEE
Confidence            998764 44455  57888988765322 11                            022223445676  5555444


Q ss_pred             c-CCC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC-C--cEEEEEcCCCCCCc
Q psy10348        189 S-CEN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS-G--RTYVWDLDVQDPSS  262 (291)
Q Consensus       189 ~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-g--~i~vwd~~~~~~~~  262 (291)
                      + .++  .|.++|+.+++..          .+ .+...  .  .....++|+|++|+..+.+ +  .|.+||+.+++.  
T Consensus       305 s~~~g~~~iy~~d~~~g~~~----------~l-t~~~~--~--~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~--  367 (430)
T PRK00178        305 SDRGGKPQIYKVNVNGGRAE----------RV-TFVGN--Y--NARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV--  367 (430)
T ss_pred             ECCCCCceEEEEECCCCCEE----------Ee-ecCCC--C--ccceEECCCCCEEEEEEccCCceEEEEEECCCCCE--
Confidence            3 333  5667777655431          11 11111  1  1123566889999877643 3  588899888642  


Q ss_pred             ceeEEEeccccccceeeeEEccCCceee
Q psy10348        263 IKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                         ..+....   ......|+|||+.|+
T Consensus       368 ---~~lt~~~---~~~~p~~spdg~~i~  389 (430)
T PRK00178        368 ---RILTDTS---LDESPSVAPNGTMLI  389 (430)
T ss_pred             ---EEccCCC---CCCCceECCCCCEEE
Confidence               2222211   223568999999886

>KOG2314|consensus

Probab=99.46  E-value=2.6e-11  Score=95.80  Aligned_cols=251  Identities=13%  Similarity=0.213  Sum_probs=155.6

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-----------CCeEE
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-----------DHTLR   82 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----------dg~i~   82 (291)
                      +-+.|||.|+    +|++-...| |.+|--++-..++.+. |.+ |.-+.||| +.++|+|-+.           ...++
T Consensus       214 tyv~wSP~GT----YL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp~-Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e~~~l~  285 (698)
T KOG2314|consen  214 TYVRWSPKGT----YLVTFHKQG-IALWGGESFDRIQRFY-HPG-VQFIDFSP-NEKYLVTYSPEPIIVEEDDNEGQQLI  285 (698)
T ss_pred             eeEEecCCce----EEEEEeccc-eeeecCccHHHHHhcc-CCC-ceeeecCC-ccceEEEecCCccccCcccCCCceEE
Confidence            4578999995    999988765 8899887777777775 644 88899999 8899998542           25699


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc------cccccCCCCcccccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA------ESYTFNPARSTRPFD  156 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~~  156 (291)
                      |||+.+|...+.+.........-.-+.||.|++++|--.. .+|.||+.....++..-.      ..+.+.|....+.+-
T Consensus       286 IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYw  364 (698)
T KOG2314|consen  286 IWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYW  364 (698)
T ss_pred             EEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEE
Confidence            9999999998888543333333345789999999998776 569999887654432211      256667765544332


Q ss_pred             C-ccccC------------cccccccccCcceeEEEEc--CCEEEEe----------cCCCeEEEecCCCCCccccccCC
Q psy10348        157 T-QKEHF------------PQFSTRDIHRNYVDCVRWL--GDFVLSK----------SCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       157 ~-~~~~~------------~~~~~~~~~~~~v~~~~~~--~~~l~~~----------~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      + .....            ..+.+.+.+.-.=..+.|.  |++|+.-          +.-..+.|+.++.....      
T Consensus       365 tpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp------  438 (698)
T KOG2314|consen  365 TPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP------  438 (698)
T ss_pred             cccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCC------
Confidence            1 11111            1122222222222334443  6666542          22234555555544321      


Q ss_pred             CceeeeeeecCCcccEEEEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        212 TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       212 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                           +.......   .++.|+|.|.|..+++-+   ...++.+|.+++......+...+.-    ...+.+.|+|.|++
T Consensus       439 -----ve~velke---~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk----~~~N~vfwsPkG~f  506 (698)
T KOG2314|consen  439 -----VEVVELKE---SVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK----KFANTVFWSPKGRF  506 (698)
T ss_pred             -----ceeeecch---heeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc----cccceEEEcCCCcE
Confidence                 22222222   256788999998877654   3457999998843221122222221    35678999999999


Q ss_pred             eeC
Q psy10348        289 LLC  291 (291)
Q Consensus       289 l~s  291 (291)
                      ++.
T Consensus       507 vvv  509 (698)
T KOG2314|consen  507 VVV  509 (698)
T ss_pred             EEE
Confidence            873

>KOG1409|consensus

Probab=99.46  E-value=3.7e-12  Score=94.67  Aligned_cols=166  Identities=15%  Similarity=0.225  Sum_probs=120.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC----CcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA----FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ..-..+++++++.++.    ..|+.|-..|++.-+.+.    ....++....|...|..+-|+. ...++++.+.|..+.
T Consensus        65 ~~mP~~~~~~~y~~e~----~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~-~~e~V~s~~~dk~~~  139 (404)
T KOG1409|consen   65 HYMPSPCSAMEYVSES----RRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSL-THEWVLSTGKDKQFA  139 (404)
T ss_pred             hhCCCCceEeeeeccc----eEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecC-CceeEEEeccccceE
Confidence            3345788899999988    589999999999888654    2344555667888899888887 667777777765543


Q ss_pred             EEECCCcc--------------------------------------eeeeeccccCCCCceEEEEEccCCCEEEEEecCC
Q psy10348         83 LWNIKTDI--------------------------------------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH  124 (291)
Q Consensus        83 vwd~~~~~--------------------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  124 (291)
                      ---.+.+.                                      ....+..+.+|.+.+.+++|.+....|++|..|.
T Consensus       140 ~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~  219 (404)
T KOG1409|consen  140 WHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDH  219 (404)
T ss_pred             EEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccC
Confidence            22211110                                      0011112478999999999999999999999999


Q ss_pred             cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCC
Q psy10348        125 SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       125 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      .+.+||+...+-+.                           ..+.+|...|..+.+.  -..+++++.||.|.+|+.+..
T Consensus       220 ~vi~wdigg~~g~~---------------------------~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  220 SVIMWDIGGRKGTA---------------------------YELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             ceEEEeccCCccee---------------------------eeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence            99999997655322                           1123577778877775  668899999999999998655


Q ss_pred             Cc
Q psy10348        203 ED  204 (291)
Q Consensus       203 ~~  204 (291)
                      ..
T Consensus       273 r~  274 (404)
T KOG1409|consen  273 RV  274 (404)
T ss_pred             ee
Confidence            43

>KOG0974|consensus

Probab=99.45  E-value=1.6e-12  Score=109.28  Aligned_cols=142  Identities=18%  Similarity=0.237  Sum_probs=115.6

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      -++++|+.-+.|.+|+....+.-..+.+|++.|.++.|+. ++.++++.+.|.++++|++++++.....  .-+|..+|.
T Consensus       146 ~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s~~~~~~~--~fgHsaRvw  222 (967)
T KOG0974|consen  146 LYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDSREVLGCT--GFGHSARVW  222 (967)
T ss_pred             EEEEeccccccEEEEeccccCCcceecccCCceEEEEEcc-CCcEEEEEecCcceeeeecccccccCcc--cccccceeE
Confidence            5899999999999999874443346889999999999999 9999999999999999999988776621  259999999


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc-CcceeEEEEc--CC
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH-RNYVDCVRWL--GD  183 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~  183 (291)
                      .+.|.|+  .+++++.|.+.++|+....+.. .+.                            .| ...+..++..  .-
T Consensus       223 ~~~~~~n--~i~t~gedctcrvW~~~~~~l~-~y~----------------------------~h~g~~iw~~~~~~~~~  271 (967)
T KOG0974|consen  223 ACCFLPN--RIITVGEDCTCRVWGVNGTQLE-VYD----------------------------EHSGKGIWKIAVPIGVI  271 (967)
T ss_pred             EEEeccc--eeEEeccceEEEEEecccceeh-hhh----------------------------hhhhcceeEEEEcCCce
Confidence            9999998  9999999999999976544322 322                            13 3347777776  44


Q ss_pred             EEEEecCCCeEEEecCCCC
Q psy10348        184 FVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       184 ~l~~~~~d~~i~iwd~~~~  202 (291)
                      .+++++.|+.+++||+...
T Consensus       272 ~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  272 IKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             EEEeeccCcchhhhhhhcc
Confidence            8899999999999998554

>KOG1334|consensus

Probab=99.44  E-value=9.1e-13  Score=102.09  Aligned_cols=203  Identities=15%  Similarity=0.141  Sum_probs=144.5

Q ss_pred             eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcE
Q psy10348         49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSL  126 (291)
Q Consensus        49 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i  126 (291)
                      ...+..|.+.|..+.|+. .|..|++|+.|..|.+||...+.....+.  .+|...|....|-|.  .+.+++++.||.+
T Consensus       135 ~~kL~~H~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~--SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSPKLSFE--SGHCNNVFQAKFIPFSGDRTIVTSSRDGQV  211 (559)
T ss_pred             hhcccCCCCccceeeecc-cCceeeccCccceEEeehhhccCcccccc--cccccchhhhhccCCCCCcCceeccccCce
Confidence            445778999999999999 99999999999999999999888877774  789999999999886  4589999999999


Q ss_pred             EEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCC
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      ++=.+........                         ......|.++|..++..   ...|++++.|+.+.-+|++...
T Consensus       212 r~s~i~~t~~~e~-------------------------t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~  266 (559)
T KOG1334|consen  212 RVSEILETGYVEN-------------------------TKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDV  266 (559)
T ss_pred             eeeeeccccceec-------------------------ceecccccCccceeeecCCCCCcccccccccceeeeeeccCC
Confidence            9877654332211                         11112388888888876   6689999999999999998775


Q ss_pred             ccccccCCCceeeeeeecC-CcccEEEEEEEecCCC-cEEEEEcCCCcEEEEEcCCCCCCc------cee-EEEeccccc
Q psy10348        204 DKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQ-KILAVGNQSGRTYVWDLDVQDPSS------IKF-QILSHPRCM  274 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~------~~~-~~~~~~~~~  274 (291)
                      ..         ..+..-.. ....|..-.++.+|-. ..+++|+.|-.+++||.+.-....      +.. ..+.. ...
T Consensus       267 pa---------~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~-d~~  336 (559)
T KOG1334|consen  267 PA---------EKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVE-DDP  336 (559)
T ss_pred             cc---------ceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccc-cCc
Confidence            43         11111111 1222444455666644 489999999999999998643210      000 01111 223


Q ss_pred             cceeeeEEccCCcee
Q psy10348        275 SAVRQTTLSKNGNVL  289 (291)
Q Consensus       275 ~~v~~~~~s~~g~~l  289 (291)
                      -.|++++|+.++.-|
T Consensus       337 v~ITgl~Ysh~~sEl  351 (559)
T KOG1334|consen  337 VNITGLVYSHDGSEL  351 (559)
T ss_pred             ccceeEEecCCccce
Confidence            468999999765443

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.43  E-value=6.7e-10  Score=86.46  Aligned_cols=233  Identities=10%  Similarity=-0.004  Sum_probs=137.2

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec----------CCeEEEEECCCcceeeeeccccC----C
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK----------DHTLRLWNIKTDICIAIFGGVEG----H  101 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~----~  101 (291)
                      +.|.+.|..+++.+.++..-..+- .+ ++| +++.|+++..          +..|.+||..+.+.+..+..-..    .
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~sp-Dg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~  103 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VAS-DGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLV  103 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc-ee-ECC-CCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhc
Confidence            899999999999998887544443 34 999 7777777655          78899999999999887731000    1


Q ss_pred             CCceEEEEEccCCCEEEEEe-c-CCcEEEEeccCchhhhhhccc-----cc--------cCCCCccccccCc------cc
Q psy10348        102 RDEVLSADFDLLGTKIMSCG-M-DHSLKLWDLTKPEIKDACAES-----YT--------FNPARSTRPFDTQ------KE  160 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~-~-d~~i~v~d~~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~------~~  160 (291)
                      ......++++|+|++|+... . +..|.+.|+.+++.+.++...     +.        ...++....+..-      ..
T Consensus       104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~  183 (352)
T TIGR02658       104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIK  183 (352)
T ss_pred             cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEe
Confidence            22344789999999998776 3 789999999999988766530     00        0111111110000      00


Q ss_pred             cCcccccc--cccCcceeEEEE-cCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-------CcccEEEE
Q psy10348        161 HFPQFSTR--DIHRNYVDCVRW-LGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-------KDCEIWFI  230 (291)
Q Consensus       161 ~~~~~~~~--~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~  230 (291)
                      ..+.+...  .....+  .... .+.++..... |+|.+.|+..........       ...+..       ....... 
T Consensus       184 ~~~vf~~~~~~v~~rP--~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~-------~~~~~~~~~~~~wrP~g~q~-  252 (352)
T TIGR02658       184 PTEVFHPEDEYLINHP--AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPA-------IEAFTEAEKADGWRPGGWQQ-  252 (352)
T ss_pred             eeeeecCCccccccCC--ceEcCCCcEEEEecC-CeEEEEecCCCcceecce-------eeeccccccccccCCCccee-
Confidence            00000000  000111  1111 2556655555 999999975543321111       111111       1222223 


Q ss_pred             EEEecCCCcEEEEEc----------CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348        231 RFSMDYWQKILAVGN----------QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL  290 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~  290 (291)
                       ++.+|+++.+++..          ..+.|.++|..+++.+    ..+..   ...+.+++++|||+ +|.
T Consensus       253 -ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi----~~i~v---G~~~~~iavS~Dgkp~ly  315 (352)
T TIGR02658       253 -VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRL----RKIEL---GHEIDSINVSQDAKPLLY  315 (352)
T ss_pred             -EEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEE----EEEeC---CCceeeEEECCCCCeEEE
Confidence             55667788888743          2257999999988532    22221   24788999999999 654

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1354|consensus

Probab=99.42  E-value=1.1e-11  Score=92.39  Aligned_cols=225  Identities=17%  Similarity=0.205  Sum_probs=144.2

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-----------------------------------eE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-----------------------------------VR   50 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-----------------------------------~~   50 (291)
                      ++..+++|..+.|.++++  ...++..+.|.+|++|.+.....                                   .+
T Consensus        80 SleieEKinkIrw~~~~n--~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prR  157 (433)
T KOG1354|consen   80 SLEIEEKINKIRWLDDGN--LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRR  157 (433)
T ss_pred             hhhhhhhhhhceecCCCC--ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeee
Confidence            345678999999998875  34677778899999998753210                                   00


Q ss_pred             EE-eeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCC-----CCceEEEEEccC-CCEEEEEecC
Q psy10348         51 HF-YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH-----RDEVLSADFDLL-GTKIMSCGMD  123 (291)
Q Consensus        51 ~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~-~~~l~~~~~d  123 (291)
                      .+ .+|+--|.++.++. |...++++ .|=.|.+|+++--..-..+-..+.+     ..-|++..|+|. .+.|+-++..
T Consensus       158 v~aNaHtyhiNSIS~Ns-D~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSK  235 (433)
T KOG1354|consen  158 VYANAHTYHINSISVNS-DKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSK  235 (433)
T ss_pred             eccccceeEeeeeeecC-ccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCC
Confidence            11 35778899999998 88888876 4788999998743222211111333     345889999996 4577778889


Q ss_pred             CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348        124 HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       124 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~  201 (291)
                      |+|++-|++...+-..-.+.+.-..+...+            +.+..--..|..+.|+  |+++++-. --+|++||+..
T Consensus       236 GtIrLcDmR~~aLCd~hsKlfEepedp~~r------------sffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nm  302 (433)
T KOG1354|consen  236 GTIRLCDMRQSALCDAHSKLFEEPEDPSSR------------SFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNM  302 (433)
T ss_pred             CcEEEeechhhhhhcchhhhhccccCCcch------------hhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccc
Confidence            999999999655432221111111110000            0001123457888998  78888754 47999999965


Q ss_pred             CCccccccCCCceeeeeeecCCc-------------ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        202 LEDKELRTNETNVTIINRLNFKD-------------CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      ...           ++.+++.|.             +--.-..++++.++.++++|+..+.++++++..+
T Consensus       303 e~~-----------pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g  361 (433)
T KOG1354|consen  303 EAK-----------PVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG  361 (433)
T ss_pred             cCC-----------cceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence            432           244444332             1112234667766789999999999999996544

>KOG1409|consensus

Probab=99.42  E-value=9.9e-12  Score=92.46  Aligned_cols=229  Identities=13%  Similarity=0.214  Sum_probs=165.6

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEcc-CCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSP-AFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      +.+.+++...-|..    +-+++.+.|.++|||-- +.++.-..+. .-..+++++.+.+ +...|+.|-.+|++.-+.+
T Consensus        23 ~~d~vn~~~l~~~e----~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~-e~~~L~vg~~ngtvtefs~   97 (404)
T KOG1409|consen   23 SQDDVNAAILIPKE----EGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVS-ESRRLYVGQDNGTVTEFAL   97 (404)
T ss_pred             chhhhhhheeccCC----CCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeec-cceEEEEEEecceEEEEEh
Confidence            34566666666666    48999999999999963 3444333332 2347889999999 8899999999999998876


Q ss_pred             CCc----ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----------ccccCCC--
Q psy10348         87 KTD----ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----------SYTFNPA--  149 (291)
Q Consensus        87 ~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----------~~~~~~~--  149 (291)
                      ...    ..++..   ..|..++..+-|+....++++.+.|..+.---.+.+..+..+.-           ...|..+  
T Consensus        98 sedfnkm~~~r~~---~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~  174 (404)
T KOG1409|consen   98 SEDFNKMTFLKDY---LAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHS  174 (404)
T ss_pred             hhhhhhcchhhhh---hhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccc
Confidence            532    233333   68999999999999899999999999887666665554432221           0111111  


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                      +............+.+....+|.+.+.++.|.  ...+++|..|..+.+||+...+..           .....+|...+
T Consensus       175 gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~-----------~~el~gh~~kV  243 (404)
T KOG1409|consen  175 GQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGT-----------AYELQGHNDKV  243 (404)
T ss_pred             cceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcce-----------eeeeccchhhh
Confidence            11111222334456777888999999999999  569999999999999999766542           56677777777


Q ss_pred             EEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      ..+.....  -+.+.+++.||.|.+|+++..
T Consensus       244 ~~l~~~~~--t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  244 QALSYAQH--TRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             hhhhhhhh--heeeeeccCCCeEEEEeccce
Confidence            77666655  789999999999999999864

>KOG2041|consensus

Probab=99.41  E-value=1e-11  Score=101.12  Aligned_cols=245  Identities=13%  Similarity=0.162  Sum_probs=162.4

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---------------eeEEEeeeccceeEEEEecC
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---------------CVRHFYGHGHAINELKFHPQ   67 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---------------~~~~~~~~~~~v~~~~~~~~   67 (291)
                      +.+.++.+....|++|+...    .++|.||.||.++|..+.+..               .-+++.+|+..|..+.|+. 
T Consensus         7 kki~iPnnvkL~c~~WNke~----gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe-   81 (1189)
T KOG2041|consen    7 KKIGIPNNVKLHCAEWNKES----GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNE-   81 (1189)
T ss_pred             cccCCCCCceEEEEEEcccC----CeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecc-
Confidence            34566778889999999987    499999999999999876421               2346789999999999998 


Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      +...|-|...+|-|.+|-+-.|.....+-+ ...++.|.+++|+.+|..+.....||.|.+=.++..+.-..-.      
T Consensus        82 ~~QKLTtSDt~GlIiVWmlykgsW~EEMiN-nRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeL------  154 (1189)
T KOG2041|consen   82 NNQKLTTSDTSGLIIVWMLYKGSWCEEMIN-NRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKEL------  154 (1189)
T ss_pred             ccccccccCCCceEEEEeeecccHHHHHhh-CcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhc------
Confidence            778899999999999999988876654422 3466789999999999999999999999887765543211100      


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                                             .......+.|+  ...++.+-..|.+.++|....-...+...- .+.....+.....
T Consensus       155 -----------------------kg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c-~Vn~tg~~s~~~~  210 (1189)
T KOG2041|consen  155 -----------------------KGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDC-EVNGTGIFSNFPT  210 (1189)
T ss_pred             -----------------------chheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhce-EEeeeeeecCCCc
Confidence                                   11113356666  235555666788888886543221111100 0000001111111


Q ss_pred             cEEEEEEE------ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        226 EIWFIRFS------MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       226 ~i~~~~~~------~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+..+.+.      .-|+...|+++..+|.+.+-.-.+....    ..+.. +  ..+....|+++|..||
T Consensus       211 kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~P----vv~dt-g--m~~vgakWnh~G~vLA  274 (1189)
T KOG2041|consen  211 KIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEP----VVVDT-G--MKIVGAKWNHNGAVLA  274 (1189)
T ss_pred             cccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCC----eEEec-c--cEeecceecCCCcEEE
Confidence            12122221      1257889999999999988765554321    22221 2  4788899999999887

>KOG3914|consensus

Probab=99.40  E-value=5.9e-12  Score=95.40  Aligned_cols=153  Identities=14%  Similarity=0.131  Sum_probs=108.6

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcce----eEEEeeeccceeEEEEecCCCcEEEE---eecCCeEEEEECCC
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC----VRHFYGHGHAINELKFHPQDFNLLLS---VSKDHTLRLWNIKT   88 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s---~~~dg~i~vwd~~~   88 (291)
                      +..++++    +++|.+..+....+++......    +.... -...-+++.|.. +......   .+....+.+|....
T Consensus        68 ~~~s~~~----~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~-~~~sv~v~dkagD~~~~di~s~~~  141 (390)
T KOG3914|consen   68 VLTSDSG----RLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIR-EDTSVLVADKAGDVYSFDILSADS  141 (390)
T ss_pred             cccCCCc----eEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeee-ccceEEEEeecCCceeeeeecccc
Confidence            3444444    6999998888877777654332    22222 122334455554 3233333   34445566676665


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      +.+...+    +|-..++.++|+||+++++++..|..|++-.......+..+-                           
T Consensus       142 ~~~~~~l----GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc---------------------------  190 (390)
T KOG3914|consen  142 GRCEPIL----GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC---------------------------  190 (390)
T ss_pred             cCcchhh----hhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc---------------------------
Confidence            6555554    999999999999999999999999999998877665554443                           


Q ss_pred             cccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        169 DIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       169 ~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      -+|...|..++.. +..|++++.|++|++||+.+++..
T Consensus       191 lGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L  228 (390)
T KOG3914|consen  191 LGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLL  228 (390)
T ss_pred             cccHhheeeeeeccCceeeecCCCCcEEEEecccCCcc
Confidence            3699999999988 667899999999999999999775

>KOG1064|consensus

Probab=99.40  E-value=1.6e-12  Score=114.94  Aligned_cols=187  Identities=15%  Similarity=0.231  Sum_probs=146.7

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +.|.++.-+|..    ++.+||+.||.|++|.-..++.+..++ +-...|+.+.|+. .|+.+..+..||.+.+|.+. .
T Consensus      2209 ~~v~r~~sHp~~----~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~-qGnk~~i~d~dg~l~l~q~~-p 2282 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSD----PYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNH-QGNKFGIVDGDGDLSLWQAS-P 2282 (2439)
T ss_pred             CceeeecCCCCC----ceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcc-cCCceeeeccCCceeecccC-C
Confidence            566777777777    599999999999999988888777765 2237899999999 88999999999999999987 4


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +.....   +.|+.....+.|-.  ..+++++.   ++.+.+||..-.....-+.                         
T Consensus      2283 k~~~s~---qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~------------------------- 2332 (2439)
T KOG1064|consen 2283 KPYTSW---QCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH------------------------- 2332 (2439)
T ss_pred             cceecc---ccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee-------------------------
Confidence            444444   78999999999875  56777654   7889999975433211110                         


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        ..|...++++++-  .++|++|+.+|.|++||++..+.            ++.++.           .+ ...++.+|
T Consensus      2333 --~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql------------~h~~~~-----------~~-~~~~f~~~ 2386 (2439)
T KOG1064|consen 2333 --TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQL------------RHTFQA-----------LD-TREYFVTG 2386 (2439)
T ss_pred             --eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHH------------HHHhhh-----------hh-hhheeecc
Confidence              3499999999998  55999999999999999987644            444442           22 37899999


Q ss_pred             cCCCcEEEEEcCCCC
Q psy10348        245 NQSGRTYVWDLDVQD  259 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~  259 (291)
                      +..|.++||++....
T Consensus      2387 ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2387 SSEGNIKIWRLSEFG 2401 (2439)
T ss_pred             CcccceEEEEccccc
Confidence            999999999998764

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.40  E-value=1.5e-09  Score=81.82  Aligned_cols=244  Identities=13%  Similarity=0.099  Sum_probs=153.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCC--cceeE--EEeeeccceeEEEEecCCCcEEEEeec-CCe
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAF--HACVR--HFYGHGHAINELKFHPQDFNLLLSVSK-DHT   80 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~   80 (291)
                      +.+..+-++|+|+.    ++|.++..   +|.|.-|.++.  |++..  .......+-..+++++ ++++++++.. .|.
T Consensus        38 ~~~nptyl~~~~~~----~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~-~g~~vf~AnY~~g~  112 (346)
T COG2706          38 ELGNPTYLAVNPDQ----RHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDE-DGRFVFVANYHSGS  112 (346)
T ss_pred             ccCCCceEEECCCC----CEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECC-CCCEEEEEEccCce
Confidence            45667778899988    47777754   47777777654  54321  2222233447899999 8888888865 478


Q ss_pred             EEEEECCC-cceeeeeccccCCCCc----------eEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCC
Q psy10348         81 LRLWNIKT-DICIAIFGGVEGHRDE----------VLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        81 i~vwd~~~-~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      |.++-+++ |....... ...|.+.          +....+.|++++|++... -..|.+|++..+++...-...+    
T Consensus       113 v~v~p~~~dG~l~~~v~-~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v----  187 (346)
T COG2706         113 VSVYPLQADGSLQPVVQ-VVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV----  187 (346)
T ss_pred             EEEEEcccCCcccccee-eeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccccccc----
Confidence            99999865 33222211 1234444          888999999999988765 3459999999776543221110    


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCCCCccccccCCCceeeeeeec-CCc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGRLEDKELRTNETNVTIINRLN-FKD  224 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~  224 (291)
                                           .....-+.+.|+  +++.++.++ +++|.+|........ +..-    ..+..+. ...
T Consensus       188 ---------------------~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~-~~~l----Q~i~tlP~dF~  241 (346)
T COG2706         188 ---------------------KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGK-FEEL----QTIDTLPEDFT  241 (346)
T ss_pred             ---------------------CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCce-EEEe----eeeccCccccC
Confidence                                 123445678888  566655554 999999998774111 0000    0111111 123


Q ss_pred             ccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEec-cccccceeeeEEccCCceeeC
Q psy10348        225 CEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSH-PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +..+..++..++||++|.++. ....|-+|.+.....   .+..... +-+....+...|+|.|++|++
T Consensus       242 g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g---~L~~~~~~~teg~~PR~F~i~~~g~~Lia  307 (346)
T COG2706         242 GTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGG---KLELVGITPTEGQFPRDFNINPSGRFLIA  307 (346)
T ss_pred             CCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCC---EEEEEEEeccCCcCCccceeCCCCCEEEE
Confidence            444566777888899999886 344888888876542   1233332 233344789999999999974

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.37  E-value=5.7e-10  Score=90.85  Aligned_cols=219  Identities=14%  Similarity=0.030  Sum_probs=123.5

Q ss_pred             cceeEEEEeeeccCCCCC--EEEEecCC--CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CC----e
Q psy10348         10 EENFYTCAWSMDLESGRP--LLAVAGSR--AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DH----T   80 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~--~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg----~   80 (291)
                      .+...+-+||||+.   .  ++++...+  ..|.+.++.+++..+ +....+.....+|+| ||+.|+..+. +|    .
T Consensus       184 ~~~~~sP~wSPDG~---~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSP-DG~~Laf~s~~~g~~di~  258 (428)
T PRK01029        184 HSLSITPTWMHIGS---GFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSP-RKKLLAFISDRYGNPDLF  258 (428)
T ss_pred             CCCcccceEccCCC---ceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECC-CCCEEEEEECCCCCccee
Confidence            34456678999874   2  22344444  468888888776433 333445556789999 8877776442 23    3


Q ss_pred             EEEEECCCc---ceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccC---chhhhhhccccccCCCCccc
Q psy10348         81 LRLWNIKTD---ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTK---PEIKDACAESYTFNPARSTR  153 (291)
Q Consensus        81 i~vwd~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~  153 (291)
                      +.+|++..+   ......   ...........|+|||+.|+..+ .+|...+|.+..   +.....+             
T Consensus       259 ~~~~~~~~g~~g~~~~lt---~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~l-------------  322 (428)
T PRK01029        259 IQSFSLETGAIGKPRRLL---NEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLL-------------  322 (428)
T ss_pred             EEEeecccCCCCcceEee---cCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEe-------------
Confidence            444777653   322222   22223446789999999877665 466666664421   1111111             


Q ss_pred             cccCccccCcccccccccCcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        154 PFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                     ..+...+....|+  |+.|+..+.+   ..|.+||+.+++..             .+......+.
T Consensus       323 ---------------t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-------------~Lt~~~~~~~  374 (428)
T PRK01029        323 ---------------TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-------------QLTTSPENKE  374 (428)
T ss_pred             ---------------ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-------------EccCCCCCcc
Confidence                           0122344566777  6666654432   47899999877542             1211111122


Q ss_pred             EEEEEecCCCcEEEEEcC---CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        229 FIRFSMDYWQKILAVGNQ---SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                        ...++|||++|+..+.   ...|.++|+.+++.    ..+..   ..+.+...+|+|-.
T Consensus       375 --~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~----~~Lt~---~~g~~~~p~Ws~~~  426 (428)
T PRK01029        375 --SPSWAIDSLHLVYSAGNSNESELYLISLITKKT----RKIVI---GSGEKRFPSWGAFP  426 (428)
T ss_pred             --ceEECCCCCEEEEEECCCCCceEEEEECCCCCE----EEeec---CCCcccCceecCCC
Confidence              2456678998875432   35788899887642    12222   23456778998864

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.36  E-value=6.1e-10  Score=91.34  Aligned_cols=196  Identities=15%  Similarity=0.110  Sum_probs=113.7

Q ss_pred             eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CC--eEEEEECCCcceeeeeccccCCCCceEEEEEccC
Q psy10348         37 VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL  113 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~  113 (291)
                      .|.++|..... .+.+..+...+....|+| +++.|+..+. ++  .|.+||+.+++.....    ..........|+|+
T Consensus       199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~lt----~~~g~~~~~~wSPD  272 (448)
T PRK04792        199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREKVT----SFPGINGAPRFSPD  272 (448)
T ss_pred             EEEEEeCCCCC-ceEeecCCCcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEEec----CCCCCcCCeeECCC
Confidence            67777865443 344555677889999999 8887776543 33  5888999877653322    22233446899999


Q ss_pred             CCEEEE-EecCCc--EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe
Q psy10348        114 GTKIMS-CGMDHS--LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK  188 (291)
Q Consensus       114 ~~~l~~-~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  188 (291)
                      |+.|+. .+.+|.  |.++|+.+++.....                             .+........|+  ++.++..
T Consensus       273 G~~La~~~~~~g~~~Iy~~dl~tg~~~~lt-----------------------------~~~~~~~~p~wSpDG~~I~f~  323 (448)
T PRK04792        273 GKKLALVLSKDGQPEIYVVDIATKALTRIT-----------------------------RHRAIDTEPSWHPDGKSLIFT  323 (448)
T ss_pred             CCEEEEEEeCCCCeEEEEEECCCCCeEECc-----------------------------cCCCCccceEECCCCCEEEEE
Confidence            997765 455665  777788766532111                             122234456676  5555444


Q ss_pred             c-CCC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-CC--cEEEEEcCCCCCCc
Q psy10348        189 S-CEN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-SG--RTYVWDLDVQDPSS  262 (291)
Q Consensus       189 ~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~  262 (291)
                      + .++  .|.++|+.+++.          ..+ ++....  .  ...+++|||++|+..+. ++  .|.++|+.+++.  
T Consensus       324 s~~~g~~~Iy~~dl~~g~~----------~~L-t~~g~~--~--~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~--  386 (448)
T PRK04792        324 SERGGKPQIYRVNLASGKV----------SRL-TFEGEQ--N--LGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM--  386 (448)
T ss_pred             ECCCCCceEEEEECCCCCE----------EEE-ecCCCC--C--cCeeECCCCCEEEEEEecCCceEEEEEECCCCCe--
Confidence            3 344  466667665532          111 112111  1  12356788999877654 34  455677776642  


Q ss_pred             ceeEEEeccccccceeeeEEccCCceee
Q psy10348        263 IKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                         ..+....   ......|+|||+.|+
T Consensus       387 ---~~lt~~~---~d~~ps~spdG~~I~  408 (448)
T PRK04792        387 ---QVLTSTR---LDESPSVAPNGTMVI  408 (448)
T ss_pred             ---EEccCCC---CCCCceECCCCCEEE
Confidence               2222111   123458999999875

>KOG2695|consensus

Probab=99.34  E-value=2.3e-12  Score=95.86  Aligned_cols=172  Identities=11%  Similarity=0.086  Sum_probs=125.6

Q ss_pred             EEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348         73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST  152 (291)
Q Consensus        73 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~  152 (291)
                      ++.+.+..|-+-|+++|.. +.|    ..++.|.++.|...+++++.|+..|.|..+|++.+..-....           
T Consensus       228 fs~G~sqqv~L~nvetg~~-qsf----~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~-----------  291 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQ-QSF----QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWC-----------  291 (425)
T ss_pred             ecccccceeEEEEeecccc-ccc----ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcc-----------
Confidence            4555667788889887654 333    467889999999989999999999999999999862110000           


Q ss_pred             ccccCccccCcccccccccCcceeEEE---EcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRNYVDCVR---WLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                                   ...-.|...|+++.   |++++|++.+.+|+|++||++..++.         +.+.++.+|......
T Consensus       292 -------------a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~---------~~V~qYeGHvN~~a~  349 (425)
T KOG2695|consen  292 -------------AQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCK---------KSVMQYEGHVNLSAY  349 (425)
T ss_pred             -------------eEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcc---------cceeeeecccccccc
Confidence                         00112778888764   45889999999999999999987654         448888898877777


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                      +-+..++.+..++++++|...|+|.+..+..+...  .+.....+..+.+++|..
T Consensus       350 l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti--pf~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  350 LPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI--PFPYSASEVDIPSVAFDS  402 (425)
T ss_pred             cccccccccceEEEccCeeEEEEEecccCceeecc--CCCCccccccccceehhc
Confidence            77778888999999999999999999998543211  112223334566677654

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.31  E-value=1.5e-09  Score=84.65  Aligned_cols=125  Identities=14%  Similarity=0.087  Sum_probs=101.0

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCC-eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg-~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      +.+.+...|.-..+..+.+    -++.|..|| .+-|+|.++++. +.+...-+.|.++..++ +|++++.+.....+.+
T Consensus       354 iqv~~~~~VrY~r~~~~~e----~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~-dGK~~vvaNdr~el~v  427 (668)
T COG4946         354 IQVGKKGGVRYRRIQVDPE----GDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSP-DGKKVVVANDRFELWV  427 (668)
T ss_pred             EEcCCCCceEEEEEccCCc----ceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcC-CCcEEEEEcCceEEEE
Confidence            3445666777777777764    788899998 999999987764 45555678899999999 9999999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC----cEEEEeccCchhhh
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH----SLKLWDLTKPEIKD  138 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~  138 (291)
                      .|+.+|.....-   +...+-|+.+.|+|+++++|-+-.+|    .|+++|+..++...
T Consensus       428 ididngnv~~id---kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~  483 (668)
T COG4946         428 IDIDNGNVRLID---KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD  483 (668)
T ss_pred             EEecCCCeeEec---ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence            999998765543   45667899999999999999887655    58999999877543

>KOG1064|consensus

Probab=99.28  E-value=2e-11  Score=108.36  Aligned_cols=150  Identities=11%  Similarity=0.239  Sum_probs=121.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee---cCCeEEEEEC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS---KDHTLRLWNI   86 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~vwd~   86 (291)
                      ...|+.+.|+..|+    .+..+..||.+.+|.+. .++....+.|........|-.   ..+++++   .++.+.+||.
T Consensus      2251 ~s~vtr~~f~~qGn----k~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDt 2322 (2439)
T KOG1064|consen 2251 NSRVTRSRFNHQGN----KFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDT 2322 (2439)
T ss_pred             cchhhhhhhcccCC----ceeeeccCCceeecccC-CcceeccccCCccccceeeee---hhhhccccCCCCCcccchhc
Confidence            46677788888885    88888999999999987 677777888999899888875   5677753   4688999997


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ........+.  ..|.+.++++++.|..++|++|+.+|.|.+||++..+++..++.                        
T Consensus      2323 l~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~------------------------ 2376 (2439)
T KOG1064|consen 2323 LLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA------------------------ 2376 (2439)
T ss_pred             ccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh------------------------
Confidence            6444333332  58999999999999999999999999999999999998876642                        


Q ss_pred             cccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcc
Q psy10348        167 TRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                                 +. ...++++|+..|.++||++......
T Consensus      2377 -----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2377 -----------LD-TREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred             -----------hh-hhheeeccCcccceEEEEccccchh
Confidence                       11 1669999999999999999887553

>KOG2695|consensus

Probab=99.28  E-value=1.1e-11  Score=92.36  Aligned_cols=153  Identities=16%  Similarity=0.212  Sum_probs=114.3

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc----
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD----   89 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----   89 (291)
                      ..|+|+.+..   .+-++.+.+-.|-+-|+++|.. +.|. -++.|.++.|.. .++++..|+.+|.|...|++.+    
T Consensus       215 ~~CawSlni~---gyhfs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~-s~nLv~~GcRngeI~~iDLR~rnqG~  288 (425)
T KOG2695|consen  215 WSCAWSLNIM---GYHFSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAG-SDNLVFNGCRNGEIFVIDLRCRNQGN  288 (425)
T ss_pred             hhhhhhhccc---eeeecccccceeEEEEeecccc-cccc-cchhHHHHHhcc-cCCeeEecccCCcEEEEEeeecccCC
Confidence            3448886543   2446666777899999987753 3454 567899999998 7899999999999999999865    


Q ss_pred             -ceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchh---hhhhccccccCCCCccccccCccccCcc
Q psy10348         90 -ICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEI---KDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        90 -~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                       .+...+    .|...|+++..-. ++++|++.+.+|+|++||++.-++   +..+.                       
T Consensus       289 ~~~a~rl----yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe-----------------------  341 (425)
T KOG2695|consen  289 GWCAQRL----YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE-----------------------  341 (425)
T ss_pred             CcceEEE----EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeee-----------------------
Confidence             344444    6999999998877 788999999999999999998776   33332                       


Q ss_pred             cccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCc
Q psy10348        165 FSTRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                           +|-+.-.-+-++    ...+++++.|...+||.++.+..
T Consensus       342 -----GHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghL  380 (425)
T KOG2695|consen  342 -----GHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHL  380 (425)
T ss_pred             -----cccccccccccccccccceEEEccCeeEEEEEecccCce
Confidence                 232222222222    45788899999999999998865

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.28  E-value=4.4e-09  Score=82.12  Aligned_cols=210  Identities=12%  Similarity=0.094  Sum_probs=143.6

Q ss_pred             CCCCCEEEEecCCCeEEEEccCCcceeEEEe-e-----------eccceeEEE-EecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         23 ESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-G-----------HGHAINELK-FHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        23 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~-----------~~~~v~~~~-~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ++||+.++-. .-|.|.+||.++.++. .+. +           ...+..-+. |++.+|++++..+. |...+.+...+
T Consensus       275 nsDGkrIvFq-~~GdIylydP~td~le-kldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~  351 (668)
T COG4946         275 NSDGKRIVFQ-NAGDIYLYDPETDSLE-KLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDG  351 (668)
T ss_pred             CCCCcEEEEe-cCCcEEEeCCCcCcce-eeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCC
Confidence            3455666553 4578999998865432 221 1           011222233 56668899998885 77888877655


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      -.++     .++...|.-..+..++.-++.|..|| .+-++|.++++......                           
T Consensus       352 ~~iq-----v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~---------------------------  399 (668)
T COG4946         352 YSIQ-----VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEK---------------------------  399 (668)
T ss_pred             eeEE-----cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeC---------------------------
Confidence            5544     37888899999988888999999999 89999999987443221                           


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                        .-+.|.++..+  |++++.+.....|.+.|+.++...             .... ...-.++.+.++|+++++|-+--
T Consensus       400 --~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~-------------~idk-S~~~lItdf~~~~nsr~iAYafP  463 (668)
T COG4946         400 --DLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVR-------------LIDK-SEYGLITDFDWHPNSRWIAYAFP  463 (668)
T ss_pred             --CccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCee-------------Eecc-cccceeEEEEEcCCceeEEEecC
Confidence              34557777777  778999998899999999988542             1111 11123567888899999998765


Q ss_pred             CC----cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        247 SG----RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       247 dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|    .|+++|+.+++    ........++.   .+-+|.|||++|.
T Consensus       464 ~gy~tq~Iklydm~~~K----iy~vTT~ta~D---fsPaFD~d~ryLY  504 (668)
T COG4946         464 EGYYTQSIKLYDMDGGK----IYDVTTPTAYD---FSPAFDPDGRYLY  504 (668)
T ss_pred             cceeeeeEEEEecCCCe----EEEecCCcccc---cCcccCCCCcEEE
Confidence            55    79999999984    22333322332   3468999999873

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.26  E-value=2.8e-09  Score=86.83  Aligned_cols=202  Identities=9%  Similarity=-0.091  Sum_probs=112.4

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcE---EEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEE
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL---LLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADF  110 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~  110 (291)
                      ..|.+.|.+.+.. +.+......+..-.|+| ||+.   +++...+|  .|.+.++..++.....    ...+......|
T Consensus       165 ~~l~~~d~dG~~~-~~lt~~~~~~~sP~wSP-DG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt----~~~g~~~~p~w  238 (428)
T PRK01029        165 GELWSVDYDGQNL-RPLTQEHSLSITPTWMH-IGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL----ALQGNQLMPTF  238 (428)
T ss_pred             ceEEEEcCCCCCc-eEcccCCCCcccceEcc-CCCceEEEEEEccCCCceEEEEECCCCCceEee----cCCCCccceEE
Confidence            4677777764443 34444455667789999 7764   23444444  5777788877654432    33444556899


Q ss_pred             ccCCCEEEEEec-CC----cEEEEeccCch--hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348        111 DLLGTKIMSCGM-DH----SLKLWDLTKPE--IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--  181 (291)
Q Consensus       111 ~~~~~~l~~~~~-d~----~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  181 (291)
                      +|||+.|+..+. +|    .+..|++..+.  ....+.                           ...........|+  
T Consensus       239 SPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt---------------------------~~~~~~~~~p~wSPD  291 (428)
T PRK01029        239 SPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLL---------------------------NEAFGTQGNPSFSPD  291 (428)
T ss_pred             CCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEee---------------------------cCCCCCcCCeEECCC
Confidence            999998876553 23    34446665431  000000                           0011223456777  


Q ss_pred             CCEEEEec-CCCeEEEec--CCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC---CcEEEEEc
Q psy10348        182 GDFVLSKS-CENCIICWK--PGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS---GRTYVWDL  255 (291)
Q Consensus       182 ~~~l~~~~-~d~~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd~  255 (291)
                      |+.|+..+ .+|...+|.  +.....           ....+......+  ....++|||++|+..+.+   ..|.+||+
T Consensus       292 G~~Laf~s~~~g~~~ly~~~~~~~g~-----------~~~~lt~~~~~~--~~p~wSPDG~~Laf~~~~~g~~~I~v~dl  358 (428)
T PRK01029        292 GTRLVFVSNKDGRPRIYIMQIDPEGQ-----------SPRLLTKKYRNS--SCPAWSPDGKKIAFCSVIKGVRQICVYDL  358 (428)
T ss_pred             CCEEEEEECCCCCceEEEEECccccc-----------ceEEeccCCCCc--cceeECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            66555544 466555554  322110           012222222222  234567889988876543   46999999


Q ss_pred             CCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        256 DVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+++.     ..+..  ....+....|+|||+.|+
T Consensus       359 ~~g~~-----~~Lt~--~~~~~~~p~wSpDG~~L~  386 (428)
T PRK01029        359 ATGRD-----YQLTT--SPENKESPSWAIDSLHLV  386 (428)
T ss_pred             CCCCe-----EEccC--CCCCccceEECCCCCEEE
Confidence            88753     22221  123566789999999875

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.25  E-value=8.7e-08  Score=76.24  Aligned_cols=211  Identities=15%  Similarity=0.115  Sum_probs=124.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCC-cceeEEE--eee-----------ccceeEEEEecCCCcEEEEe
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAF-HACVRHF--YGH-----------GHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~-~~~~~~~--~~~-----------~~~v~~~~~~~~~~~~l~s~   75 (291)
                      .....++++|++    ++|+++. .+|.|.++++.. +.+....  ..|           .....++.|+| +++++++.
T Consensus        87 ~~p~~i~~~~~g----~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-dg~~v~v~  161 (345)
T PF10282_consen   87 SSPCHIAVDPDG----RFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-DGRFVYVP  161 (345)
T ss_dssp             SCEEEEEECTTS----SEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-TSSEEEEE
T ss_pred             CCcEEEEEecCC----CEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECC-CCCEEEEE
Confidence            344567777777    4666664 689999999986 4433221  111           13467899999 88877775


Q ss_pred             ec-CCeEEEEECCCcc--eee--eeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCC
Q psy10348         76 SK-DHTLRLWNIKTDI--CIA--IFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        76 ~~-dg~i~vwd~~~~~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                      .. ...|.+|++....  ...  .+.  .......+.+.|+|++++++...+ ++.|.++++....-.......+...|.
T Consensus       162 dlG~D~v~~~~~~~~~~~l~~~~~~~--~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~  239 (345)
T PF10282_consen  162 DLGADRVYVYDIDDDTGKLTPVDSIK--VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE  239 (345)
T ss_dssp             ETTTTEEEEEEE-TTS-TEEEEEEEE--CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred             ecCCCEEEEEEEeCCCceEEEeeccc--cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence            43 3479999987654  211  221  345667899999999998877665 788999999822211111100000000


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCC-CccccccCCCceeeeeeecCCcc
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRL-EDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                      .                  .........++++  |++|+++. .++.|.+|++... ...         +.+..+.....
T Consensus       240 ~------------------~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l---------~~~~~~~~~G~  292 (345)
T PF10282_consen  240 G------------------FTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTL---------TLVQTVPTGGK  292 (345)
T ss_dssp             T------------------SCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTE---------EEEEEEEESSS
T ss_pred             c------------------ccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCce---------EEEEEEeCCCC
Confidence            0                  0012246677777  66666544 5789999998432 111         33333333222


Q ss_pred             cEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCC
Q psy10348        226 EIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDV  257 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~  257 (291)
                      ...  .+.++|+|++|+++. .++.|.+|++..
T Consensus       293 ~Pr--~~~~s~~g~~l~Va~~~s~~v~vf~~d~  323 (345)
T PF10282_consen  293 FPR--HFAFSPDGRYLYVANQDSNTVSVFDIDP  323 (345)
T ss_dssp             SEE--EEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred             Ccc--EEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence            223  455678899999887 667899998753

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2315|consensus

Probab=99.22  E-value=1.2e-08  Score=81.07  Aligned_cols=198  Identities=15%  Similarity=0.166  Sum_probs=130.4

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEE-----ecCCCeEEEEccCCccee-----EEEeeeccceeEEEEecCCCcEEEEe
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAV-----AGSRAVIRIFSPAFHACV-----RHFYGHGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~-----~~~dg~i~vw~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      .-.|...|...++||...+  ..+|+     .|.-+.|+||........     +.|.  ...=..+.|++....+|+.+
T Consensus       161 ~kl~~~~i~~f~lSpgp~~--~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFF--kadkvqm~WN~~gt~LLvLa  236 (566)
T KOG2315|consen  161 HKLSVSGITMLSLSPGPEP--PFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFF--KADKVQMKWNKLGTALLVLA  236 (566)
T ss_pred             eeeeccceeeEEecCCCCC--ceEEEEccCCCCCCcEEEEeccccccccchhhhcccc--ccceeEEEeccCCceEEEEE
Confidence            3456788999999998432  35555     245578999987632221     1221  12224578887333344433


Q ss_pred             ec--C---------CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEE--EecCCcEEEEeccCchhhhhhcc
Q psy10348         76 SK--D---------HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS--CGMDHSLKLWDLTKPEIKDACAE  142 (291)
Q Consensus        76 ~~--d---------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d~~i~v~d~~~~~~~~~~~~  142 (291)
                      +.  |         .++++.+++...+...+    ...++|.++.|+|+++.|++  |-.-..+.|||++..- +..+  
T Consensus       237 stdVDktn~SYYGEq~Lyll~t~g~s~~V~L----~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~-v~df--  309 (566)
T KOG2315|consen  237 STDVDKTNASYYGEQTLYLLATQGESVSVPL----LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKP-VFDF--  309 (566)
T ss_pred             EEeecCCCccccccceEEEEEecCceEEEec----CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCE-eEeC--
Confidence            32  2         36888888744444444    56899999999999987655  4457789999987543 2222  


Q ss_pred             ccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC---CCeEEEecCCCCCccccccCCCceeee
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC---ENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                                                  .+++=+++-|+  |++++.++-   -|.|.+||+.+.+.            +
T Consensus       310 ----------------------------~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~------------i  349 (566)
T KOG2315|consen  310 ----------------------------PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL------------I  349 (566)
T ss_pred             ----------------------------CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh------------c
Confidence                                        34555677777  787777665   57899999988644            5


Q ss_pred             eeecCCcccEEEEEEEecCCCcEEEEEc------CCCcEEEEEcCCC
Q psy10348        218 NRLNFKDCEIWFIRFSMDYWQKILAVGN------QSGRTYVWDLDVQ  258 (291)
Q Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~------~dg~i~vwd~~~~  258 (291)
                      ..+....    ..-+.|+|||+++++++      -|+.++||+....
T Consensus       350 ~~~~a~~----tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~  392 (566)
T KOG2315|consen  350 AKFKAAN----TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS  392 (566)
T ss_pred             cccccCC----ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence            5555443    33466778899999987      3788999998764

>KOG2315|consensus

Probab=99.20  E-value=5.6e-09  Score=82.90  Aligned_cols=218  Identities=13%  Similarity=0.150  Sum_probs=134.7

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-CCcEEEE-----eecCCeEEEEECC
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLS-----VSKDHTLRLWNIK   87 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s-----~~~dg~i~vwd~~   87 (291)
                      ++..|++|.     .+++--..+.+.+|+...-+.+. -+-|...|+.+.++|. ....+|+     .+.-+.|+||...
T Consensus       129 W~~qfs~dE-----sl~arlv~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~  202 (566)
T KOG2315|consen  129 WVPQFSIDE-----SLAARLVSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYP  202 (566)
T ss_pred             cccccccch-----hhhhhhhcceEEEEecCCcccee-eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccc
Confidence            477788876     45555566889999987643322 1236788999999994 3445554     3455679999876


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCC-EEE--EEecCC---------cEEEEeccCchhhhhhccccccCCCCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGT-KIM--SCGMDH---------SLKLWDLTKPEIKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~--~~~~d~---------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~  155 (291)
                      ....-..+..-......=..+.|++-|. +|+  +..-|.         ++++.++......-.+.              
T Consensus       203 ~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~--------------  268 (566)
T KOG2315|consen  203 EEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL--------------  268 (566)
T ss_pred             cccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC--------------
Confidence            3332222211112233334678988776 222  222233         57777766333222211              


Q ss_pred             cCccccCcccccccccCcceeEEEEc--CC--EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL--GD--FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                                     ..++|.++.|+  +.  -++-|-+=..+.|||++-.             ++..+  ..++-+.+-
T Consensus       269 ---------------k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-------------~v~df--~egpRN~~~  318 (566)
T KOG2315|consen  269 ---------------KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-------------PVFDF--PEGPRNTAF  318 (566)
T ss_pred             ---------------CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-------------EeEeC--CCCCccceE
Confidence                           57889999998  43  3455667889999998763             23333  333334444


Q ss_pred             EEecCCCcEEEEEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        232 FSMDYWQKILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       232 ~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+  |.|++++.++   .-|.|-|||+.+.+.+.+    +..    ..-+-+.|+|||+++++
T Consensus       319 fn--p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~----~~a----~~tt~~eW~PdGe~flT  371 (566)
T KOG2315|consen  319 FN--PHGNIILLAGFGNLPGDMEVWDVPNRKLIAK----FKA----ANTTVFEWSPDGEYFLT  371 (566)
T ss_pred             EC--CCCCEEEEeecCCCCCceEEEeccchhhccc----ccc----CCceEEEEcCCCcEEEE
Confidence            44  5599999887   458999999999764432    221    13345799999999874

>KOG4190|consensus

Probab=99.20  E-value=1e-10  Score=92.86  Aligned_cols=172  Identities=20%  Similarity=0.284  Sum_probs=120.9

Q ss_pred             eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-------ceeeeeccccCCCCceEEEEEccCCCEEEEEe
Q psy10348         49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        49 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      +..+.+|+..|..++--. +.+-+++++.|.+|++|.++..       .+..++   ..|+.+|.++.|-.+-++++++ 
T Consensus       728 L~nf~GH~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY---~aHkk~i~~igfL~~lr~i~Sc-  802 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTY---QAHKKPIHDIGFLADLRSIASC-  802 (1034)
T ss_pred             eecccCcHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEh---hhccCcccceeeeeccceeeec-
Confidence            345678999999988776 7788999999999999998632       233444   7899999999999888777755 


Q ss_pred             cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEE-cCCEEEE-ecCCCeEEEecC
Q psy10348        122 MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW-LGDFVLS-KSCENCIICWKP  199 (291)
Q Consensus       122 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~-~~~d~~i~iwd~  199 (291)
                       ||.|++||.--++.+..+...    |                   ..+....|.|+.- +..+++. ++...+|+++|.
T Consensus       803 -D~giHlWDPFigr~Laq~~da----p-------------------k~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~Da  858 (1034)
T KOG4190|consen  803 -DGGIHLWDPFIGRLLAQMEDA----P-------------------KEGAGGNIKCLENVDRHILIAGCSAESTVKLFDA  858 (1034)
T ss_pred             -cCcceeecccccchhHhhhcC----c-------------------ccCCCceeEecccCcchheeeeccchhhheeeec
Confidence             899999999888776644321    1                   0112233444433 2334444 477999999999


Q ss_pred             CCCCccccccCCCceeeeeee--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        200 GRLEDKELRTNETNVTIINRL--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      +..+-.         ...+..  .+....+.+++++  +.|+++|++-.+|.|.+.|.++++.
T Consensus       859 Rsce~~---------~E~kVcna~~Pna~~R~iaVa--~~GN~lAa~LSnGci~~LDaR~G~v  910 (1034)
T KOG4190|consen  859 RSCEWT---------CELKVCNAPGPNALTRAIAVA--DKGNKLAAALSNGCIAILDARNGKV  910 (1034)
T ss_pred             ccccce---------eeEEeccCCCCchheeEEEec--cCcchhhHHhcCCcEEEEecCCCce
Confidence            877541         111111  2334445555555  5599999999999999999999863

>KOG4532|consensus

Probab=99.20  E-value=1.1e-08  Score=74.10  Aligned_cols=225  Identities=10%  Similarity=-0.045  Sum_probs=138.2

Q ss_pred             CEEEEecCCCeEEEEccCCccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      .+||.||..|...+|...+.+.. +....|...|+-+.=.-+...-+..++.|.++++.+++-+.....+.   ...-.+
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h---~~~~~~  161 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVH---NQNLTQ  161 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceee---ccccce
Confidence            48999999999999999876543 33334444333222111122345667888999999887554433331   111238


Q ss_pred             EEEEEccCCCEEEEEecCCcEEEEeccCchhh-hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        106 LSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK-DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      .+++++++++++++.+....|..|.+.....- ..+..                          ......=.+..|+  .
T Consensus       162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~--------------------------a~t~D~gF~~S~s~~~  215 (344)
T KOG4532|consen  162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYE--------------------------APTSDHGFYNSFSEND  215 (344)
T ss_pred             eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEe--------------------------cccCCCceeeeeccCc
Confidence            89999999999999999999999988654321 11000                          0011222355666  5


Q ss_pred             CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        183 DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      ..++++..||++.|||++....+....       -.+-..|.+.+..+.|++-.--.+|+..-.-+.+.|.|+++....+
T Consensus       216 ~~FAv~~Qdg~~~I~DVR~~~tpm~~~-------sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q  288 (344)
T KOG4532|consen  216 LQFAVVFQDGTCAIYDVRNMATPMAEI-------SSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQ  288 (344)
T ss_pred             ceEEEEecCCcEEEEEecccccchhhh-------cccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceee
Confidence            589999999999999999875432111       2233447788888888853112345555556789999999987543


Q ss_pred             ceeEEE-ecccccc-ceeeeEEccCCc
Q psy10348        263 IKFQIL-SHPRCMS-AVRQTTLSKNGN  287 (291)
Q Consensus       263 ~~~~~~-~~~~~~~-~v~~~~~s~~g~  287 (291)
                      .....- ....|.. .|..-.|+.++.
T Consensus       289 ~I~i~~d~~~~~~tq~ifgt~f~~~n~  315 (344)
T KOG4532|consen  289 VIVIPDDVERKHNTQHIFGTNFNNENE  315 (344)
T ss_pred             EEecCccccccccccccccccccCCCc
Confidence            221111 1112332 366666766654

>KOG1275|consensus

Probab=99.17  E-value=1.3e-09  Score=91.28  Aligned_cols=182  Identities=15%  Similarity=0.187  Sum_probs=129.0

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      ..++.|+-...+..+|+.+.+..+...-....|+-|+.   +++++.+|...|+|.+-|.++.+.+..+   ..|.+.|.
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~---Nnr~lf~G~t~G~V~LrD~~s~~~iht~---~aHs~siS  221 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY---NNRNLFCGDTRGTVFLRDPNSFETIHTF---DAHSGSIS  221 (1118)
T ss_pred             cceeecchhhheeeeecccceeeeeeeccCCceEEEEe---cCcEEEeecccceEEeecCCcCceeeee---ecccccee
Confidence            46777777778888999888877766544445666654   4589999999999999999999999998   89999998


Q ss_pred             EEEEccCCCEEEEEec---------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeE
Q psy10348        107 SADFDLLGTKIMSCGM---------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC  177 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  177 (291)
                      .+..  .|++|+++|.         |..|+|||++..+.+..+.-                            +.++ .-
T Consensus       222 DfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~----------------------------~~~P-~f  270 (1118)
T KOG1275|consen  222 DFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQF----------------------------PYGP-QF  270 (1118)
T ss_pred             eeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccc----------------------------ccCc-hh
Confidence            7665  5889999875         66789999998876543321                            1111 12


Q ss_pred             EEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        178 VRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       178 ~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      +.|.   ...+++.+..|...+-|..+.....        ..+..+......  +.+|.+++++..+|.|..+|.|.+|.
T Consensus       271 lrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~--------~~~~~v~p~~s~--i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  271 LRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP--------AGVKMVNPNGSG--ISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             hhhcccccceEEEEecccceeeccccccCCCc--------cceeEEccCCCc--ceeEEecCCCceEEEecccCcEeeec
Confidence            2333   4477888889999999954432210        012222222333  45566667799999999999999998


Q ss_pred             c
Q psy10348        255 L  255 (291)
Q Consensus       255 ~  255 (291)
                      -
T Consensus       341 ~  341 (1118)
T KOG1275|consen  341 D  341 (1118)
T ss_pred             C
Confidence            3

>KOG0309|consensus

Probab=99.17  E-value=2.3e-10  Score=93.67  Aligned_cols=160  Identities=18%  Similarity=0.317  Sum_probs=119.8

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      .|-.+.|+|....  ++-++......-.+|++..   ......+.+|...|+.+.|+|+....+++++.|..+..||+++
T Consensus        69 ~vad~qws~h~a~--~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rS  146 (1081)
T KOG0309|consen   69 QVADVQWSPHPAK--PYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRS  146 (1081)
T ss_pred             hhcceecccCCCC--ceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccC
Confidence            4556778876532  3555555566777899753   3344566799999999999999999999999999999999986


Q ss_pred             cc-eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         89 DI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        89 ~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      .. ++..+   ..-...-..++|+-....+++.+..+.|++||++.+...                           .-.
T Consensus       147 p~~p~ys~---~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~p---------------------------l~s  196 (1081)
T KOG0309|consen  147 PHRPFYST---SSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTP---------------------------LCS  196 (1081)
T ss_pred             CCcceeee---ecccccCceeeecccCcchhhhccCCceEEEeccCCCcc---------------------------eEE
Confidence            54 33333   344556678999887666777777788999999987632                           222


Q ss_pred             ccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCC
Q psy10348        168 RDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       168 ~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      +++|-..|..+.|+   ...+++.+.|++|++||.....
T Consensus       197 ~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt  235 (1081)
T KOG0309|consen  197 LKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST  235 (1081)
T ss_pred             ecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence            34577888888887   5588999999999999987553

>KOG4190|consensus

Probab=99.16  E-value=5.2e-11  Score=94.50  Aligned_cols=205  Identities=14%  Similarity=0.134  Sum_probs=137.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-------cceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-------HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .|.+.|+.++--.+.    +-+++++.|.+|++|.++.       ..+..+++.|+.+|..+.|.. +.+.+++  .||-
T Consensus       733 GH~~~iRai~AidNE----NSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~-~lr~i~S--cD~g  805 (1034)
T KOG4190|consen  733 GHQEKIRAIAAIDNE----NSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLA-DLRSIAS--CDGG  805 (1034)
T ss_pred             CcHHHhHHHHhcccc----cceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeee-ccceeee--ccCc
Confidence            356666666554444    4899999999999999763       235667789999999999998 7677765  5788


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccC--CCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL--GTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      |.+||.-.++.+..+..-..| +.+..+..-++  ...++.+ +...+|+++|.+..+....++.+-.            
T Consensus       806 iHlWDPFigr~Laq~~dapk~-~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna------------  872 (1034)
T KOG4190|consen  806 IHLWDPFIGRLLAQMEDAPKE-GAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNA------------  872 (1034)
T ss_pred             ceeecccccchhHhhhcCccc-CCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccC------------
Confidence            999998888777644321222 22233333333  3444444 6689999999998876544432111            


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                                 .+...-+++++..  |+.++.+-..|+|.+.|.+++..            +..+..-.+....++ +  
T Consensus       873 -----------~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~v------------INswrpmecdllqla-a--  926 (1034)
T KOG4190|consen  873 -----------PGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKV------------INSWRPMECDLLQLA-A--  926 (1034)
T ss_pred             -----------CCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCce------------eccCCcccchhhhhc-C--
Confidence                       1233456677665  99999999999999999999853            555544433322221 2  


Q ss_pred             CCCcEEEEEcCCCcEEE-EEcCCC
Q psy10348        236 YWQKILAVGNQSGRTYV-WDLDVQ  258 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~v-wd~~~~  258 (291)
                      |..+.|+....|.++.| |....+
T Consensus       927 psdq~L~~saldHslaVnWhaldg  950 (1034)
T KOG4190|consen  927 PSDQALAQSALDHSLAVNWHALDG  950 (1034)
T ss_pred             chhHHHHhhcccceeEeeehhcCC
Confidence            44778888888888888 776554

>KOG1912|consensus

Probab=99.14  E-value=8.1e-10  Score=90.99  Aligned_cols=176  Identities=15%  Similarity=0.249  Sum_probs=120.3

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcceeeeec
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDICIAIFG   96 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~   96 (291)
                      +++|.|...|+|.++|+.++...+.+..|+..|.++.|.. .. .|++.+          .-..+.+-|+++|.....-.
T Consensus       438 pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g-~s-slvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~  515 (1062)
T KOG1912|consen  438 PLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLG-NS-SLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRG  515 (1062)
T ss_pred             eeEEeecCCceEEEEEecchhhhhhhcccccceeeeeecc-ce-eEEEeeeccccccccceeeeEEEEEccccccccccc
Confidence            5899999999999999999999999999999999999986 43 444432          23457788999886544321


Q ss_pred             cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc------cccC-CC---Cc-------------cc
Q psy10348         97 GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES------YTFN-PA---RS-------------TR  153 (291)
Q Consensus        97 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~~-~~---~~-------------~~  153 (291)
                      ..+....+|+.+..+..+++|+..-.|.-+.+||+++..+.+.....      +.|. |.   ..             ..
T Consensus       516 l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~mS~a~P~it~leWsl~~~~si~qk~ls~q~sms~n~v  595 (1062)
T KOG1912|consen  516 LQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLMSLALPLITVLEWSLPKHPSIKQKELSKQSSMSENLV  595 (1062)
T ss_pred             CCCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHHhhcCCcEEEEeecccCCCCcccccchhhhhhhhcee
Confidence            12456789999999999999999999999999999888776654431      2222 11   00             00


Q ss_pred             cccCccccCc--------------ccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCc
Q psy10348        154 PFDTQKEHFP--------------QFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       154 ~~~~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      ...+......              .....+.....+..++|.++.++.|..+|.+++||+.....
T Consensus       596 v~ds~es~~~~~~~~a~~~sdgsq~~~a~esfafal~~mAwk~d~lv~GD~~GNl~~WDlg~R~S  660 (1062)
T KOG1912|consen  596 VLDSVESRIYHITLSALVVSDGSQVNTAWESFAFALCAMAWKDDILVVGDVEGNLVVWDLGRRQS  660 (1062)
T ss_pred             eeccccchheehhhhhhhhccccchhhHHHHHHHHHHhhhccCCeeEeecccCceeEEecccccc
Confidence            0001000000              00011111223445778899999999999999999866544

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.14  E-value=2.8e-07  Score=69.87  Aligned_cols=233  Identities=10%  Similarity=0.106  Sum_probs=137.3

Q ss_pred             EEEEeeeccCCCCCEEEEec-CCCeEEEEccCC-cceeE--EEeeeccc----------eeEEEEecCCCcEEEEeecC-
Q psy10348         14 YTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAF-HACVR--HFYGHGHA----------INELKFHPQDFNLLLSVSKD-   78 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~~l~s~~~d-   78 (291)
                      .-++.++++    ++++++. ..|.|.++-++. |.+..  .+..|.+.          +....+.| ++++|++.+.. 
T Consensus        92 ~yvsvd~~g----~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP-~~~~l~v~DLG~  166 (346)
T COG2706          92 CYVSVDEDG----RFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTP-DGRYLVVPDLGT  166 (346)
T ss_pred             eEEEECCCC----CEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCC-CCCEEEEeecCC
Confidence            566777776    4777775 458999999865 43322  22235555          88899999 88888887432 


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCch-hhhhhccccccCCCCcccccc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      -+|.+|++..|.....-.........-+.+.|+|++++.+...+ +++|-+|...... ....++. +..-|..      
T Consensus       167 Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~-i~tlP~d------  239 (346)
T COG2706         167 DRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQT-IDTLPED------  239 (346)
T ss_pred             ceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeee-eccCccc------
Confidence            35999999977654332211345667889999999999888776 9999999988741 1111110 0000100      


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                  ........+|..+  |++|+++.. ...|.+|.+......        ...+.....+.  ..--.|.
T Consensus       240 ------------F~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~--------L~~~~~~~teg--~~PR~F~  297 (346)
T COG2706         240 ------------FTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGK--------LELVGITPTEG--QFPRDFN  297 (346)
T ss_pred             ------------cCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCE--------EEEEEEeccCC--cCCccce
Confidence                        0123334555555  777776654 346777766543221        01122222221  1123467


Q ss_pred             ecCCCcEEEEEcCC-CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        234 MDYWQKILAVGNQS-GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       234 ~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      +++.+++|+++..+ ..|.+|......-   .+..+..........||.|.
T Consensus       298 i~~~g~~Liaa~q~sd~i~vf~~d~~TG---~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         298 INPSGRFLIAANQKSDNITVFERDKETG---RLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             eCCCCCEEEEEccCCCcEEEEEEcCCCc---eEEecccccCCCCcEEEEEc
Confidence            77889999998854 4688988775431   11222221233455666664

>KOG2066|consensus

Probab=99.14  E-value=3.6e-09  Score=87.54  Aligned_cols=193  Identities=12%  Similarity=0.136  Sum_probs=131.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      ...+.++|++++-      +.++-|..+|.|++.+.+ +.. .+...|...      .. +|.+++||+.||+|.|-.+-
T Consensus        37 ~~~D~is~~av~~------~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~-~Gey~asCS~DGkv~I~sl~  101 (846)
T KOG2066|consen   37 LQNDAISCCAVHD------KFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------IL-EGEYVASCSDDGKVVIGSLF  101 (846)
T ss_pred             HhhhHHHHHHhhc------ceeeeccccceEEEEecC-Ccc-ccccccccc------cc-CCceEEEecCCCcEEEeecc
Confidence            3456777777774      389999999999999976 444 344445443      44 89999999999999999998


Q ss_pred             CcceeeeeccccCCCCceEEEEEccC-----CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLL-----GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +.+....+    ....++.+++++|+     .+.+++||.-| +.++.-+-.......                      
T Consensus       102 ~~~~~~~~----df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v----------------------  154 (846)
T KOG2066|consen  102 TDDEITQY----DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV----------------------  154 (846)
T ss_pred             CCccceeE----ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce----------------------
Confidence            88887776    56789999999998     56899999888 777653221111000                      


Q ss_pred             cccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        163 PQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                          ......++|.++.|.|++++-++.+| |++||+...+.....+.+........+        --.+.|.+ ...|+
T Consensus       155 ----~l~~~eG~I~~i~W~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~f--------pphl~W~~-~~~LV  220 (846)
T KOG2066|consen  155 ----VLSEGEGPIHSIKWRGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELF--------PPHLHWQD-EDRLV  220 (846)
T ss_pred             ----eeecCccceEEEEecCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccC--------CCceEecC-CCeEE
Confidence                11235788999999999999988655 899999887654222221110000111        11233433 56677


Q ss_pred             EEcCCCcEEEEEcCC
Q psy10348        243 VGNQSGRTYVWDLDV  257 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~  257 (291)
                      .|=.| +|++..++.
T Consensus       221 IGW~d-~v~i~~I~~  234 (846)
T KOG2066|consen  221 IGWGD-SVKICSIKK  234 (846)
T ss_pred             EecCC-eEEEEEEec
Confidence            77655 688888873

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.13  E-value=2.6e-10  Score=59.39  Aligned_cols=39  Identities=46%  Similarity=0.844  Sum_probs=36.7

Q ss_pred             cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348         46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus        46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ++++..+++|.++|.+|+|+| ++.+|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSP-DGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence            467889999999999999999 899999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.13  E-value=9.9e-08  Score=70.10  Aligned_cols=106  Identities=23%  Similarity=0.161  Sum_probs=72.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-------eccceeEEEEecCC-----CcEEEEeecCC
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-------HGHAINELKFHPQD-----FNLLLSVSKDH   79 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~-----~~~l~s~~~dg   79 (291)
                      .-+-++||||+.    +||.+...|+|+++|+.. ..+..+..       -..+|..|.|.+..     ...|+.-..+|
T Consensus        45 QWRkl~WSpD~t----lLa~a~S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G  119 (282)
T PF15492_consen   45 QWRKLAWSPDCT----LLAYAESTGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRG  119 (282)
T ss_pred             hheEEEECCCCc----EEEEEcCCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccc
Confidence            346789999995    999999999999999874 43434432       13567777776522     22566667788


Q ss_pred             eEEEEECCCc-----ceeeeeccccCCCCceEEEEEccCCCEEEEEec
Q psy10348         80 TLRLWNIKTD-----ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM  122 (291)
Q Consensus        80 ~i~vwd~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  122 (291)
                      .++-|-+..+     +....+.-...+...|.++.++|..++|+.||.
T Consensus       120 ~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~  167 (282)
T PF15492_consen  120 QLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGC  167 (282)
T ss_pred             eeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEecc
Confidence            8887765322     223333222345779999999999998888775

>KOG1912|consensus

Probab=99.11  E-value=8.9e-09  Score=85.09  Aligned_cols=121  Identities=15%  Similarity=0.168  Sum_probs=99.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCC-----------CcEEEEeecCCe
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD-----------FNLLLSVSKDHT   80 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~l~s~~~dg~   80 (291)
                      .-.++.|+|.|     ++|-|+. ..|.+-|..+-+.++.+..|...|+.+.|.|..           .-+||++...|.
T Consensus        17 N~~A~Dw~~~G-----LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~Gr   90 (1062)
T KOG1912|consen   17 NRNAADWSPSG-----LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGR   90 (1062)
T ss_pred             cccccccCccc-----eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCc
Confidence            35678899998     8888876 478999999999999999999999999998721           136788888999


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccC---C-CEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL---G-TKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~-~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      |.+||...+..+..+   ..|..++..++|-+.   . ..|+.-....++.+|+..+|+......
T Consensus        91 Iil~d~~~~s~~~~l---~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~  152 (1062)
T KOG1912|consen   91 IILVDFVLASVINWL---SHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD  152 (1062)
T ss_pred             EEEEEehhhhhhhhh---cCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc
Confidence            999999988887777   788999999999763   3 356666667899999999998765543

>KOG4532|consensus

Probab=99.11  E-value=2e-08  Score=72.82  Aligned_cols=151  Identities=14%  Similarity=0.064  Sum_probs=106.9

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeecc--ceeEEEEecCCCcEEEEeecCCeEEEEECCCcc-eeeeeccccCCCCc
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGH--AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDE  104 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~  104 (291)
                      -+..++.|.++++.+++-+..-..  .|..  .+.++.+++ +++++++.+....|..|.+.... .+.... .....+.
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~~~--~h~~~~~~ns~~~sn-d~~~~~~Vgds~~Vf~y~id~~sey~~~~~-~a~t~D~  205 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNKFA--VHNQNLTQNSLHYSN-DPSWGSSVGDSRRVFRYAIDDESEYIENIY-EAPTSDH  205 (344)
T ss_pred             ceeeccCCcceeEEEEecCcccce--eeccccceeeeEEcC-CCceEEEecCCCcceEEEeCCccceeeeeE-ecccCCC
Confidence            355566777777777653322222  2333  378899999 99999999999999999886543 222211 1344455


Q ss_pred             eEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---
Q psy10348        105 VLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---  181 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---  181 (291)
                      -.+..|+.....+|++..||++.|||++.........                       -++...|.+.++.+.|+   
T Consensus       206 gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~-----------------------sstrp~hnGa~R~c~Fsl~g  262 (344)
T KOG4532|consen  206 GFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI-----------------------SSTRPHHNGAFRVCRFSLYG  262 (344)
T ss_pred             ceeeeeccCcceEEEEecCCcEEEEEecccccchhhh-----------------------cccCCCCCCceEEEEecCCC
Confidence            5788899999999999999999999999765432221                       12223489999999998   


Q ss_pred             -CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        182 -GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       182 -~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                       -++|+....-+.+.+.|+++....
T Consensus       263 ~lDLLf~sEhfs~~hv~D~R~~~~~  287 (344)
T KOG4532|consen  263 LLDLLFISEHFSRVHVVDTRNYVNH  287 (344)
T ss_pred             cceEEEEecCcceEEEEEcccCcee
Confidence             247777777899999999998654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.11  E-value=1.2e-09  Score=80.72  Aligned_cols=225  Identities=13%  Similarity=0.172  Sum_probs=136.4

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----eeEEEeeec------------cceeEEEEecC-C
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----CVRHFYGHG------------HAINELKFHPQ-D   68 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~-~   68 (291)
                      ....+.|+++.|...|.    +|++|...|.|.+|.-+...     ....+++|.            ..|..+.|... .
T Consensus        23 ~tead~ItaVefd~tg~----YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~   98 (460)
T COG5170          23 STEADKITAVEFDETGL----YLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTG   98 (460)
T ss_pred             ccccceeeEEEeccccc----eEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCC
Confidence            45678899999999884    99999999999999865432     233455654            57888888652 2


Q ss_pred             CcEEEEeecCCeEEEEECCCcce-------------------eeee-----cc----------------ccCCCCceEEE
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDIC-------------------IAIF-----GG----------------VEGHRDEVLSA  108 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~-------------------~~~~-----~~----------------~~~~~~~i~~~  108 (291)
                      ...++..+.|.+|++|.+.....                   +...     ..                ...|.--|.++
T Consensus        99 r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSi  178 (460)
T COG5170          99 RNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSI  178 (460)
T ss_pred             cceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeee
Confidence            34566667899999998754210                   0000     00                13566678889


Q ss_pred             EEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEE
Q psy10348        109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFV  185 (291)
Q Consensus       109 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l  185 (291)
                      .|+.+...++++. |-.|.+|++.-......+.   ...|..           .      ..-...|++..|+   .+.+
T Consensus       179 S~NsD~et~lSaD-dLrINLWnl~i~D~sFnIV---DiKP~n-----------m------eeLteVItSaeFhp~~cn~f  237 (460)
T COG5170         179 SFNSDKETLLSAD-DLRINLWNLEIIDGSFNIV---DIKPHN-----------M------EELTEVITSAEFHPEMCNVF  237 (460)
T ss_pred             eecCchheeeecc-ceeeeeccccccCCceEEE---eccCcc-----------H------HHHHHHHhhcccCHhHcceE
Confidence            9998888888775 7789999886533211111   000100           0      0012335666676   4577


Q ss_pred             EEecCCCeEEEecCCCCCccc----cccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        186 LSKSCENCIICWKPGRLEDKE----LRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       186 ~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      .-.+..|.|++-|++......    +...........-+..-...|.  .+.++++|+++++-+.- +|++||.+..+
T Consensus       238 mYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSIS--D~kFs~ngryIlsRdyl-tvkiwDvnm~k  312 (460)
T COG5170         238 MYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSIS--DFKFSDNGRYILSRDYL-TVKIWDVNMAK  312 (460)
T ss_pred             EEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhc--ceEEcCCCcEEEEeccc-eEEEEeccccc
Confidence            777889999999998542210    0000000000111112222333  45555779999987754 89999998765

>KOG4714|consensus

Probab=99.10  E-value=5.9e-10  Score=80.18  Aligned_cols=133  Identities=16%  Similarity=0.243  Sum_probs=89.3

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCch
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      ..|.+++-+|...+++++|+.||.+.+||.+.......+  +..|+.+|..+.|+|. +..|++++.||.+.-||-.+.-
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~--l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~  257 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSL--LKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTF  257 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHH--HHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCce
Confidence            459999999977788999999999999999977554443  3789999999999996 5689999999999999987522


Q ss_pred             hhhhhccccccCCCCccccccCcc---ccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEec
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQK---EHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWK  198 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd  198 (291)
                       +.     +.... ....+|..-.   .....-..+......|+++...|..+++|+.-+.|++++
T Consensus       258 -l~-----i~~~~-s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  258 -LS-----ISNQA-SVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             -EE-----ecCcc-ccccccccCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence             11     00000 0111111111   000111111223334566666699999999888888875

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.09  E-value=1.8e-07  Score=84.19  Aligned_cols=234  Identities=13%  Similarity=0.086  Sum_probs=128.3

Q ss_pred             eEEEEeeeccCCCCCEEEE-ecCCCeEEEEccCCcceeEEEeee-----------------ccceeEEEEecCCCcEEEE
Q psy10348         13 FYTCAWSMDLESGRPLLAV-AGSRAVIRIFSPAFHACVRHFYGH-----------------GHAINELKFHPQDFNLLLS   74 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~l~s   74 (291)
                      ...+++.++++    .|++ -...+.|+++|..++. +.++.+-                 -..-..++++|.++.++++
T Consensus       626 P~GIavd~~gn----~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVa  700 (1057)
T PLN02919        626 PQGLAYNAKKN----LLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIA  700 (1057)
T ss_pred             CcEEEEeCCCC----EEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEE
Confidence            46777877763    4444 4456789999987654 3333210                 0123578999966677777


Q ss_pred             eecCCeEEEEECCCcceeeeec-----cccC------CCCceEEEEEccCCCEEE-EEecCCcEEEEeccCchhhhhhcc
Q psy10348         75 VSKDHTLRLWNIKTDICIAIFG-----GVEG------HRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPEIKDACAE  142 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~~~~~~-----~~~~------~~~~i~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~  142 (291)
                      ...++.|++||..++.......     ...+      .-.....++++|+++.|+ +-+.++.|++||+.++..... ..
T Consensus       701 d~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~-~g  779 (1057)
T PLN02919        701 MAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLL-AG  779 (1057)
T ss_pred             ECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEE-Ee
Confidence            7888999999988765422110     0001      112456799999998554 555579999999987652110 00


Q ss_pred             ccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceee-eee
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTI-INR  219 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~  219 (291)
                      .....+.. ...+.....  ...   ...-.....++++  |+++++-..+++|++||..+.....+......... -..
T Consensus       780 g~~~~~~~-l~~fG~~dG--~g~---~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~  853 (1057)
T PLN02919        780 GDPTFSDN-LFKFGDHDG--VGS---EVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKA  853 (1057)
T ss_pred             cccccCcc-cccccCCCC--chh---hhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcc
Confidence            00000000 000000000  000   0011123467776  67888888899999999877643211100000000 000


Q ss_pred             ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        220 LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      ....-....  .++.+++|+++++-+.++.|++||+.+++.
T Consensus       854 ~~a~l~~P~--GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        854 LKAQLSEPA--GLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             cccccCCce--EEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            000001122  345557799888888999999999988753

>KOG4714|consensus

Probab=99.07  E-value=6.3e-09  Score=75.03  Aligned_cols=144  Identities=12%  Similarity=0.080  Sum_probs=92.1

Q ss_pred             CEEEEecCCCeEEEEccCCcce-eEEEeeeccceeEEEEecCCCcEEEEee-----cCCeEEEEECCCcceeeeeccccC
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHAC-VRHFYGHGHAINELKFHPQDFNLLLSVS-----KDHTLRLWNIKTDICIAIFGGVEG  100 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~~~~  100 (291)
                      ..+++++.||.+.+++.+.-.. ...+..-...-.+.+... .++++.++.     .-+..+.|+++..+....-   ..
T Consensus       102 t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~-~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~---~~  177 (319)
T KOG4714|consen  102 NRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICR-HGNSILSGGCGNWNAQDNFYANTLDPIKTLIPS---KK  177 (319)
T ss_pred             CceEecCCCceEEEEechHHHhhhhhcccccccccccceee-cccEEecCCcceEeeccceeeeccccccccccc---cc
Confidence            4899999999999999765211 111111111112222332 334554432     1234556665432222111   22


Q ss_pred             CCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        101 HRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       101 ~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                      ....|.+++-+|..+ .+++|+.||.+-+||.+......                           +.+..|+.++..+.
T Consensus       178 ~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~---------------------------S~l~ahk~~i~eV~  230 (319)
T KOG4714|consen  178 ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPV---------------------------SLLKAHKAEIWEVH  230 (319)
T ss_pred             ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchH---------------------------HHHHHhhhhhhhee
Confidence            334489999998754 67788889999999999875432                           23356999999999


Q ss_pred             Ec---CCEEEEecCCCeEEEecCCC
Q psy10348        180 WL---GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       180 ~~---~~~l~~~~~d~~i~iwd~~~  201 (291)
                      |+   +..|++++.||.+..||..+
T Consensus       231 FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  231 FHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             ccCCCchheeEecCCCcEEEEcCCC
Confidence            98   67999999999999999874

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=2.8e-07  Score=74.88  Aligned_cols=117  Identities=8%  Similarity=0.004  Sum_probs=75.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecC--CeEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKD--HTLRLW   84 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~d--g~i~vw   84 (291)
                      +.+..-.|+|+++   ..++..+.   +..|.++|+.+++...... ..+......|+| |++.++ +.+.+  ..|.++
T Consensus       188 ~~~~~p~wSpDG~---~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~  262 (419)
T PRK04043        188 GLNIFPKWANKEQ---TAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSK-DGSKLLLTMAPKGQPDIYLY  262 (419)
T ss_pred             CCeEeEEECCCCC---cEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECC-CCCEEEEEEccCCCcEEEEE
Confidence            3667888999984   33554332   3579999998887554433 455566788999 776554 44434  468888


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchh
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEI  136 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~  136 (291)
                      |+.+++... +   ..+........|+|||+.|+..+. .+  .|.+.|+.+++.
T Consensus       263 dl~~g~~~~-L---T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~  313 (419)
T PRK04043        263 DTNTKTLTQ-I---TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV  313 (419)
T ss_pred             ECCCCcEEE-c---ccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence            887766433 3   233333345679999997776653 33  577777776654

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=3.8e-07  Score=74.09  Aligned_cols=194  Identities=11%  Similarity=0.047  Sum_probs=109.8

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcE-EEEeec---CCeEEEEECCCcceeeeeccccCCCCceEEEEEc
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL-LLSVSK---DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD  111 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~  111 (291)
                      ..|.+-|.+ |...+.+... +......|+| +++. ++..+.   +..|.++|+.+++.....    ...+......|+
T Consensus       169 ~~l~~~d~d-g~~~~~~~~~-~~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt----~~~g~~~~~~~S  241 (419)
T PRK04043        169 SNIVLADYT-LTYQKVIVKG-GLNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA----SSQGMLVVSDVS  241 (419)
T ss_pred             ceEEEECCC-CCceeEEccC-CCeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEEEEe----cCCCcEEeeEEC
Confidence            355555554 3323333323 3778899999 7763 554333   356999999887765543    344556678899


Q ss_pred             cCCCEEEEE-ecC--CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEE
Q psy10348        112 LLGTKIMSC-GMD--HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVL  186 (291)
Q Consensus       112 ~~~~~l~~~-~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  186 (291)
                      |||+.++.. +.+  ..|.++|+.+++..+...                             +........|+  |+.|+
T Consensus       242 PDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~-----------------------------~~~~d~~p~~SPDG~~I~  292 (419)
T PRK04043        242 KDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITN-----------------------------YPGIDVNGNFVEDDKRIV  292 (419)
T ss_pred             CCCCEEEEEEccCCCcEEEEEECCCCcEEEccc-----------------------------CCCccCccEECCCCCEEE
Confidence            999876543 333  457777877665322110                             11111223465  55444


Q ss_pred             Eec-CCC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC---------CcEEEEE
Q psy10348        187 SKS-CEN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS---------GRTYVWD  254 (291)
Q Consensus       187 ~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---------g~i~vwd  254 (291)
                      ..+ ..+  .|.+.|+.+++..             .+......  .  ..++|||++|+..+..         ..|.+.|
T Consensus       293 F~Sdr~g~~~Iy~~dl~~g~~~-------------rlt~~g~~--~--~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d  355 (419)
T PRK04043        293 FVSDRLGYPNIFMKKLNSGSVE-------------QVVFHGKN--N--SSVSTYKNYIVYSSRETNNEFGKNTFNLYLIS  355 (419)
T ss_pred             EEECCCCCceEEEEECCCCCeE-------------eCccCCCc--C--ceECCCCCEEEEEEcCCCcccCCCCcEEEEEE
Confidence            433 333  5777777665431             11111111  1  2567889988776643         3688888


Q ss_pred             cCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        255 LDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.+++.     ..+...+   ......|+|||+.|+
T Consensus       356 ~~~g~~-----~~LT~~~---~~~~p~~SPDG~~I~  383 (419)
T PRK04043        356 TNSDYI-----RRLTANG---VNQFPRFSSDGGSIM  383 (419)
T ss_pred             CCCCCe-----EECCCCC---CcCCeEECCCCCEEE
Confidence            887742     2222211   233588999999875

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.05  E-value=8.9e-08  Score=72.25  Aligned_cols=195  Identities=13%  Similarity=-0.010  Sum_probs=118.3

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC-Cce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR-DEV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~i  105 (291)
                      ..+++++.++.+..||..+|+.+..+.. .+.+......  .+..++.+..++.+..+|..+|+.+.......... ...
T Consensus        37 ~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~--~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~  113 (238)
T PF13360_consen   37 GRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVV--DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVR  113 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEE--ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeee--cccccccccceeeeEecccCCcceeeeeccccccccccc
Confidence            4788888999999999999999888775 3332222222  33556666788899999999999888731101011 111


Q ss_pred             EEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEE
Q psy10348        106 LSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFV  185 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  185 (291)
                      ........+..++.+..++.|..+|+++|+.+.......  .+...            .+   .........+.+.++.+
T Consensus       114 ~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~~------------~~---~~~~~~~~~~~~~~~~v  176 (238)
T PF13360_consen  114 SSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE--PRGSS------------PI---SSFSDINGSPVISDGRV  176 (238)
T ss_dssp             --SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST--T-SS--------------E---EEETTEEEEEECCTTEE
T ss_pred             cccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC--CCCCc------------ce---eeecccccceEEECCEE
Confidence            222223337888888889999999999999765543200  00000            00   00001112333334477


Q ss_pred             EEecCCCe-EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        186 LSKSCENC-IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       186 ~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      +.++.++. +.+ |+.+++.            +.... ... ..   -.+..++..|++++.++.|..||+.+++
T Consensus       177 ~~~~~~g~~~~~-d~~tg~~------------~w~~~-~~~-~~---~~~~~~~~~l~~~~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  177 YVSSGDGRVVAV-DLATGEK------------LWSKP-ISG-IY---SLPSVDGGTLYVTSSDGRLYALDLKTGK  233 (238)
T ss_dssp             EEECCTSSEEEE-ETTTTEE------------EEEEC-SS--EC---ECEECCCTEEEEEETTTEEEEEETTTTE
T ss_pred             EEEcCCCeEEEE-ECCCCCE------------EEEec-CCC-cc---CCceeeCCEEEEEeCCCEEEEEECCCCC
Confidence            77777775 555 9888753            22222 111 11   1133458888888899999999999985

...

>KOG0882|consensus

Probab=99.05  E-value=3e-09  Score=82.37  Aligned_cols=221  Identities=14%  Similarity=0.059  Sum_probs=147.4

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---cceeEEEeeeccceeEEEEecCCCcEEEEeec-CCeE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---HACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTL   81 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i   81 (291)
                      +..|.+.|+.|.-....     ++.+++-||.++.|....   -+.+..+..|-..|.+++.+. ++.++.|.+. |..+
T Consensus         5 symhrd~i~hv~~tka~-----fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~-dg~L~~Sv~d~Dhs~   78 (558)
T KOG0882|consen    5 SYMHRDVITHVFPTKAK-----FIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSY-DGWLFRSVEDPDHSV   78 (558)
T ss_pred             hhcccceeeeEeeehhh-----eEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccc-cceeEeeccCcccce
Confidence            45788999998888775     999999999999998643   144556678899999999998 9999999777 9999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCC--EEE-EEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT--KIM-SCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      +++|++.-..+..++ +..-.+.+..+ .++...  .++ +.-.++.+.++|-....+..                    
T Consensus        79 KvfDvEn~DminmiK-L~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~--------------------  136 (558)
T KOG0882|consen   79 KVFDVENFDMINMIK-LVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQD--------------------  136 (558)
T ss_pred             eEEEeeccchhhhcc-cccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCcc--------------------
Confidence            999998765543331 01222222221 222211  333 33458899999976654321                    


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC-CCcc--ccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR-LEDK--ELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                            ......|..+|.++.+.  ++.+++....|.|.-|.... .+-+  .+.........+..+.-....  ..++.
T Consensus       137 ------~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~--pts~E  208 (558)
T KOG0882|consen  137 ------GYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTE--PTSFE  208 (558)
T ss_pred             ------ceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccC--ccceE
Confidence                  11223499999999998  88999999999999998763 1111  011111111112222222222  23456


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      ++|++..+++-+.|..|++++..+++.++
T Consensus       209 fsp~g~qistl~~DrkVR~F~~KtGklvq  237 (558)
T KOG0882|consen  209 FSPDGAQISTLNPDRKVRGFVFKTGKLVQ  237 (558)
T ss_pred             EccccCcccccCcccEEEEEEeccchhhh
Confidence            66779999999999999999999987543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.05  E-value=4.8e-07  Score=70.81  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=56.1

Q ss_pred             eeeccCCCCCEEEEe-c---------CCCeEEEEccCCcceeEEEeeecc-------ceeEEEEecCCCcEEEEee-c-C
Q psy10348         18 WSMDLESGRPLLAVA-G---------SRAVIRIFSPAFHACVRHFYGHGH-------AINELKFHPQDFNLLLSVS-K-D   78 (291)
Q Consensus        18 ~s~~~~~~~~~l~~~-~---------~dg~i~vw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~s~~-~-d   78 (291)
                      +|||+.    .++++ +         .+..|.+||..+.+.+..+.....       ....++++| ++++|+... . +
T Consensus        53 ~spDg~----~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~-dgk~l~V~n~~p~  127 (352)
T TIGR02658        53 VASDGS----FFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTP-DNKTLLFYQFSPS  127 (352)
T ss_pred             ECCCCC----EEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECC-CCCEEEEecCCCC
Confidence            788874    55554 4         578999999999999988863222       234788999 888888766 3 6


Q ss_pred             CeEEEEECCCcceeeee
Q psy10348         79 HTLRLWNIKTDICIAIF   95 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~   95 (291)
                      ..|.+.|+.+++.+..+
T Consensus       128 ~~V~VvD~~~~kvv~ei  144 (352)
T TIGR02658       128 PAVGVVDLEGKAFVRMM  144 (352)
T ss_pred             CEEEEEECCCCcEEEEE
Confidence            88999999998887766

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG3914|consensus

Probab=99.04  E-value=1e-08  Score=78.27  Aligned_cols=158  Identities=10%  Similarity=0.016  Sum_probs=102.7

Q ss_pred             eeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCch
Q psy10348         59 INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKPE  135 (291)
Q Consensus        59 v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~  135 (291)
                      ...+..++ +++++|.+..+....+++.........+.....-...-+.+.|..+......+..   ...+.+|....+.
T Consensus        65 ~~~~~~s~-~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   65 PALVLTSD-SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             ccccccCC-CceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            33445566 8899999988888777777644331111000122233344555555554444444   3444445444343


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCc
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETN  213 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  213 (291)
                      ....                             -+|-.-++.|+++  +++|+++..|..|++-.....-          
T Consensus       144 ~~~~-----------------------------lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f----------  184 (390)
T KOG3914|consen  144 CEPI-----------------------------LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF----------  184 (390)
T ss_pred             cchh-----------------------------hhhhhhhheeeecCCCCEEEEecCCceEEEEecCccc----------
Confidence            3322                             2588899999998  7799999999999997765542          


Q ss_pred             eeeeeeec-CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348        214 VTIINRLN-FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       214 ~~~~~~~~-~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                        .+..|. +|..-|..+++..   +..|++|+.|++|++||+.+++.+
T Consensus       185 --~IesfclGH~eFVS~isl~~---~~~LlS~sGD~tlr~Wd~~sgk~L  228 (390)
T KOG3914|consen  185 --VIESFCLGHKEFVSTISLTD---NYLLLSGSGDKTLRLWDITSGKLL  228 (390)
T ss_pred             --chhhhccccHhheeeeeecc---CceeeecCCCCcEEEEecccCCcc
Confidence              255555 4777777776653   567999999999999999999765

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.04  E-value=2.4e-07  Score=74.95  Aligned_cols=186  Identities=10%  Similarity=-0.010  Sum_probs=112.6

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccce-----eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCC
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI-----NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH  101 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~  101 (291)
                      ..++.+..+|.++.||.++|+.+..++......     .+....  + ..++.+..+|.+..+|.++|+.+.........
T Consensus       146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~-~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~  222 (377)
T TIGR03300       146 GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--D-GGVLVGFAGGKLVALDLQTGQPLWEQRVALPK  222 (377)
T ss_pred             CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--C-CEEEEECCCCEEEEEEccCCCEeeeeccccCC
Confidence            366667778888888888888776665322211     111112  2 35677788899999999999876543210000


Q ss_pred             C-Cc---eEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcce
Q psy10348        102 R-DE---VLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV  175 (291)
Q Consensus       102 ~-~~---i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  175 (291)
                      . ..   ...+.-+|  .+..++.++.+|.++.||..+++.+.....                             . ..
T Consensus       223 g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~-----------------------------~-~~  272 (377)
T TIGR03300       223 GRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDA-----------------------------S-SY  272 (377)
T ss_pred             CCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeecc-----------------------------C-Cc
Confidence            0 00   00010011  256788888899999999998875533210                             0 01


Q ss_pred             eEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        176 DCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       176 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                      ......++.++.++.||.+..+|..+++.            +........... .....  .+..|++++.+|.|+++|.
T Consensus       273 ~~p~~~~~~vyv~~~~G~l~~~d~~tG~~------------~W~~~~~~~~~~-ssp~i--~g~~l~~~~~~G~l~~~d~  337 (377)
T TIGR03300       273 QGPAVDDNRLYVTDADGVVVALDRRSGSE------------LWKNDELKYRQL-TAPAV--VGGYLVVGDFEGYLHWLSR  337 (377)
T ss_pred             cCceEeCCEEEEECCCCeEEEEECCCCcE------------EEccccccCCcc-ccCEE--ECCEEEEEeCCCEEEEEEC
Confidence            12233477888888999999999988754            222211111110 01112  2779999999999999999


Q ss_pred             CCCCC
Q psy10348        256 DVQDP  260 (291)
Q Consensus       256 ~~~~~  260 (291)
                      .+++.
T Consensus       338 ~tG~~  342 (377)
T TIGR03300       338 EDGSF  342 (377)
T ss_pred             CCCCE
Confidence            98863

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.04  E-value=6.2e-07  Score=80.87  Aligned_cols=252  Identities=10%  Similarity=0.068  Sum_probs=138.7

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--e------------ccceeEEEEecCCCcEEEEe-ecCC
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--H------------GHAINELKFHPQDFNLLLSV-SKDH   79 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~------------~~~v~~~~~~~~~~~~l~s~-~~dg   79 (291)
                      .+++++.+.   .++++-..++.|++||.. ++.+..+.+  .            -.....+++.+ +++.|+.+ ..++
T Consensus       572 gvavd~~~g---~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~-~gn~LYVaDt~n~  646 (1057)
T PLN02919        572 KLAIDLLNN---RLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNA-KKNLLYVADTENH  646 (1057)
T ss_pred             eEEEECCCC---eEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeC-CCCEEEEEeCCCc
Confidence            567776532   477777788999999976 554444432  1            12357889998 66655554 4567


Q ss_pred             eEEEEECCCcceeeeeccc-------cCC-------CCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhcccc
Q psy10348         80 TLRLWNIKTDICIAIFGGV-------EGH-------RDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~-------~~~-------~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                      .|+++|+.++. +..+...       .+.       -.....++++|+ +..+++.+.++.|++||..++.... +.   
T Consensus       647 ~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~---  721 (1057)
T PLN02919        647 ALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FS---  721 (1057)
T ss_pred             eEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-Ee---
Confidence            89999987654 3333100       000       123467999994 5566666778999999987765321 11   


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCC-ceeeeeee
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNET-NVTIINRL  220 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~  220 (291)
                         ..+......   ....    ....-.....++++  ++ ++++.+.++.|++||+.++.......... ....+..+
T Consensus       722 ---G~G~~~~~~---g~~~----~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~f  791 (1057)
T PLN02919        722 ---GDGYERNLN---GSSG----TSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKF  791 (1057)
T ss_pred             ---cCCccccCC---CCcc----ccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccc
Confidence               111000000   0000    00112335667887  45 55666678999999987654211000000 00000001


Q ss_pred             cCCcc------cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc------------ccccceeeeEE
Q psy10348        221 NFKDC------EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP------------RCMSAVRQTTL  282 (291)
Q Consensus       221 ~~~~~------~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~------------~~~~~v~~~~~  282 (291)
                      ....+      ...-..++++++|.++++-+.+++|++||..++..     ..+...            +.-.....+++
T Consensus       792 G~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v-----~tiaG~G~~G~~dG~~~~a~l~~P~GIav  866 (1057)
T PLN02919        792 GDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRV-----TTLAGTGKAGFKDGKALKAQLSEPAGLAL  866 (1057)
T ss_pred             cCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeE-----EEEeccCCcCCCCCcccccccCCceEEEE
Confidence            00000      00012345567799888888999999999987632     111111            11235778999


Q ss_pred             ccCCceeeC
Q psy10348        283 SKNGNVLLC  291 (291)
Q Consensus       283 s~~g~~l~s  291 (291)
                      +++|+.+++
T Consensus       867 d~dG~lyVa  875 (1057)
T PLN02919        867 GENGRLFVA  875 (1057)
T ss_pred             eCCCCEEEE
Confidence            999987664

>KOG0309|consensus

Probab=99.02  E-value=3e-09  Score=87.36  Aligned_cols=210  Identities=17%  Similarity=0.310  Sum_probs=143.4

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeec--cceeEEEEecCC-CcEEEEeecC
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHG--HAINELKFHPQD-FNLLLSVSKD   78 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~--~~v~~~~~~~~~-~~~l~s~~~d   78 (291)
                      +.+++.-++++.+++.+|.+    +-+|.++.-| +.+.|+.. ..+.+.+. |.  -.|-.+.|+|.. ..+-++....
T Consensus        17 kslsl~v~~~~~a~si~p~g----rdi~lAsr~g-l~i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts~   90 (1081)
T KOG0309|consen   17 KSLSLKVDGGFNAVSINPSG----RDIVLASRQG-LYIIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTSN   90 (1081)
T ss_pred             ceeEEEecCcccceeecccc----chhhhhhhcC-eEEEeccCCCCCceeee-ccCcchhcceecccCCCCceeEEecCc
Confidence            45677888999999999998    4778777765 55666653 33434343 33  246677887621 2344444555


Q ss_pred             CeEEEEECCCc--ceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccc
Q psy10348         79 HTLRLWNIKTD--ICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        79 g~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~  155 (291)
                      ..-.+|++...  +.+..+  +.+|...|+.+.|+|... .+++++.|-.+..||+++....                  
T Consensus        91 qkaiiwnlA~ss~~aIef~--lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p------------------  150 (1081)
T KOG0309|consen   91 QKAIIWNLAKSSSNAIEFV--LHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRP------------------  150 (1081)
T ss_pred             chhhhhhhhcCCccceEEE--EecCccceeccccCCCCCcceeeccccccceeeeccCCCcc------------------
Confidence            66778988543  333322  279999999999999765 7889999999999999876521                  


Q ss_pred             cCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                               +.....-......|.|+  ...+++.+..+.|.+||++.+..           ++..++++...++.+++.
T Consensus       151 ---------~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~-----------pl~s~K~~vs~vn~~~fn  210 (1081)
T KOG0309|consen  151 ---------FYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGST-----------PLCSLKGHVSSVNSIDFN  210 (1081)
T ss_pred             ---------eeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCc-----------ceEEecccceeeehHHHh
Confidence                     11111133446678887  33455566788999999998764           377777777766665543


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      - .....+.+.+.||+|+.||.....
T Consensus       211 r-~~~s~~~s~~~d~tvkfw~y~kSt  235 (1081)
T KOG0309|consen  211 R-FKYSEIMSSSNDGTVKFWDYSKST  235 (1081)
T ss_pred             h-hhhhhhcccCCCCceeeecccccc
Confidence            2 124567889999999999998754

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.02  E-value=3.6e-07  Score=80.94  Aligned_cols=252  Identities=12%  Similarity=0.074  Sum_probs=143.2

Q ss_pred             ceeEEEEeeeccCCCCCEEEEec-CCC--eEEEEccCCcc---eeEEEe-----eeccceeEEEEecCCCcEEEEeecCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAG-SRA--VIRIFSPAFHA---CVRHFY-----GHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~-~dg--~i~vw~~~~~~---~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      ..+...+|.+..+   ..+++.+ ...  .|.+-......   .+..+.     ...+.|.++.|.+ +...++.+..+|
T Consensus        22 ~~~~~~~~d~~sd---~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~-d~~~l~~~~~~G   97 (928)
T PF04762_consen   22 LPITATAFDSDSD---SIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLA-DSESLCIALASG   97 (928)
T ss_pred             cccceEEEecCCC---eEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEecc-CCCcEEEEECCc
Confidence            4567777776653   3333333 322  34443333222   233332     2346899999999 878888889999


Q ss_pred             eEEEE----ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-------------
Q psy10348         80 TLRLW----NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-------------  142 (291)
Q Consensus        80 ~i~vw----d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------------  142 (291)
                      .|.+.    +..+.. +...   ..-...|.+++||||+..|+.++.++++.+.. ++...+....-             
T Consensus        98 di~~~~~~~~~~~~~-~E~V---G~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~VsV  172 (928)
T PF04762_consen   98 DIILVREDPDPDEDE-IEIV---GSVDSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSDDFGESKHVSV  172 (928)
T ss_pred             eEEEEEccCCCCCce-eEEE---EEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCccccCCCceeee
Confidence            99999    544332 2333   34578999999999999999999999988864 33333222111             


Q ss_pred             -----ccccCCCCccccccC-ccccCc--ccccccccCcceeEEEEc--CCEEEEecC------CCeEEEecCCCCCccc
Q psy10348        143 -----SYTFNPARSTRPFDT-QKEHFP--QFSTRDIHRNYVDCVRWL--GDFVLSKSC------ENCIICWKPGRLEDKE  206 (291)
Q Consensus       143 -----~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~~~~------d~~i~iwd~~~~~~~~  206 (291)
                           ...|........-.. .....+  ...... ....-..++|-  |.++++.+.      -..+++|+-. +... 
T Consensus       173 GWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~-  249 (928)
T PF04762_consen  173 GWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQ-  249 (928)
T ss_pred             ccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEE-
Confidence                 111211111110000 000111  001112 44456678887  678888764      2589999965 3221 


Q ss_pred             cccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC---CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        207 LRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ---SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                                 ..-+.-.+--.  .++|-|.|.++|+.-.   ...|.+|+-+...-   -...+........|..++|+
T Consensus       250 -----------stSE~v~gLe~--~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrh---geF~l~~~~~~~~v~~l~Wn  313 (928)
T PF04762_consen  250 -----------STSEPVDGLEG--ALSWRPSGNLIASSQRLPDRHDVVFFERNGLRH---GEFTLRFDPEEEKVIELAWN  313 (928)
T ss_pred             -----------eccccCCCccC--CccCCCCCCEEEEEEEcCCCcEEEEEecCCcEe---eeEecCCCCCCceeeEEEEC
Confidence                       11111111111  3556677999999864   45677777655431   12333333455689999999


Q ss_pred             cCCceee
Q psy10348        284 KNGNVLL  290 (291)
Q Consensus       284 ~~g~~l~  290 (291)
                      +|+..||
T Consensus       314 ~ds~iLA  320 (928)
T PF04762_consen  314 SDSEILA  320 (928)
T ss_pred             CCCCEEE
Confidence            9999987

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.02  E-value=1.5e-09  Score=56.45  Aligned_cols=38  Identities=26%  Similarity=0.587  Sum_probs=35.0

Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      +++..+   .+|...|.+++|+|++.+|++++.|+.|++||
T Consensus         2 ~~~~~~---~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTF---RGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEE---ESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEE---cCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            456666   79999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1008|consensus

Probab=99.00  E-value=3.1e-10  Score=91.44  Aligned_cols=201  Identities=16%  Similarity=0.216  Sum_probs=132.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEeeeccceeEEEEecCCCcEEEEee----cCCeEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFYGHGHAINELKFHPQDFNLLLSVS----KDHTLRLW   84 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~----~dg~i~vw   84 (291)
                      ..+.|+++.-+..  ..++++|..+|.|.+-......-  -....++..++++++|++.|.+.||.|-    .|..+.||
T Consensus        57 qy~kcva~~y~~d--~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   57 QYVKCVASFYGND--RCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             CCceeehhhcCCc--hhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence            4566777776542  36899999999999988764322  2334578899999999998888888873    35679999


Q ss_pred             ECCCc--cee--eeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh-hhhccccccCCCCccccccCcc
Q psy10348         85 NIKTD--ICI--AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK-DACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        85 d~~~~--~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      |+.++  .+.  ..+.  .+......+++|..+.+++++|.....++++|++..... ..+                   
T Consensus       135 di~s~ltvPke~~~fs--~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv-------------------  193 (783)
T KOG1008|consen  135 DINSLLTVPKESPLFS--SSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV-------------------  193 (783)
T ss_pred             ecccccCCCccccccc--cccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh-------------------
Confidence            99876  221  2221  123345568899988889999998999999999843221 111                   


Q ss_pred             ccCcccccccccCcceeEEE---EcCCEEEEecCCCeEEEec-CCCCCccccccCCCceeeeeeecCCc----ccEEEEE
Q psy10348        160 EHFPQFSTRDIHRNYVDCVR---WLGDFVLSKSCENCIICWK-PGRLEDKELRTNETNVTIINRLNFKD----CEIWFIR  231 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~---~~~~~l~~~~~d~~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~  231 (291)
                                 ....+..+.   |.++++++.. ||.|.+|| .+..+..           +.......    ..+..++
T Consensus       194 -----------nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienp-----------l~~i~~~~N~~~~~l~~~a  250 (783)
T KOG1008|consen  194 -----------NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENP-----------LQIILRNENKKPKQLFALA  250 (783)
T ss_pred             -----------hhhhcccceecCCCCCceeccc-cCceeeccchhhhccH-----------HHHHhhCCCCcccceeeEE
Confidence                       111222333   3477887766 99999999 4443322           22221111    2356777


Q ss_pred             EEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        232 FSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       232 ~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ++|...|......-..++|+++|+..
T Consensus       251 ycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  251 YCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             eccCCcchhhhhccCcceEEEecccc
Confidence            88776566555566778999999864

>KOG1832|consensus

Probab=98.98  E-value=6.5e-10  Score=93.04  Aligned_cols=192  Identities=15%  Similarity=0.100  Sum_probs=130.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd   85 (291)
                      .|+...+|++|+.+.+    .|++|+..|.|+++++.+|........|..+|+-+.=+. +|..+++.+.-.  -..+|+
T Consensus      1099 d~~~~fTc~afs~~~~----hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~-dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTN----HLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSV-DGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred             ccccceeeEEeecCCc----eEEeeeccceEEEEEccCccccccccccccccccccccC-CcceeeeeccccCchHHHhc
Confidence            3567889999999884    999999999999999999999999999999999999998 777777654433  467999


Q ss_pred             CCC-cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      +.+ +.....+       ..-.++.|+...+.-+.|+......+||++++....++.....-                  
T Consensus      1174 ~~s~~~~~Hsf-------~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~------------------ 1228 (1516)
T KOG1832|consen 1174 ASSTGGPRHSF-------DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVT------------------ 1228 (1516)
T ss_pred             cccccCccccc-------cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchh------------------
Confidence            864 3333333       34567889877666666776677999999999888774321000                  


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                            ..-.-++..|+  ..+++   .||  .+||.+..+.            ++.|......+   .=.++|+|.-++
T Consensus      1229 ------~~y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~a------------Ih~FD~ft~~~---~G~FHP~g~eVI 1282 (1516)
T KOG1832|consen 1229 ------SSYSNNLAHFSPCDTLIL---NDG--VLWDVRIPEA------------IHRFDQFTDYG---GGGFHPSGNEVI 1282 (1516)
T ss_pred             ------hhhhccccccCCCcceEe---eCc--eeeeeccHHH------------Hhhhhhheecc---cccccCCCceEE
Confidence                  00001334444  23333   234  4799887643            44443322111   123567788888


Q ss_pred             EEcCCCcEEEEEcCCCCC
Q psy10348        243 VGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~  260 (291)
                      .-+.     |||+++.+.
T Consensus      1283 INSE-----IwD~RTF~l 1295 (1516)
T KOG1832|consen 1283 INSE-----IWDMRTFKL 1295 (1516)
T ss_pred             eech-----hhhhHHHHH
Confidence            8764     899998753

>KOG2314|consensus

Probab=98.98  E-value=1.3e-07  Score=75.42  Aligned_cols=253  Identities=10%  Similarity=0.074  Sum_probs=147.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecC-----------CCeEEEEccCCcceeEEEeeecc--c-eeEEEEecCCCcEEEEee
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGS-----------RAVIRIFSPAFHACVRHFYGHGH--A-INELKFHPQDFNLLLSVS   76 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~-----------dg~i~vw~~~~~~~~~~~~~~~~--~-v~~~~~~~~~~~~l~s~~   76 (291)
                      -.|.-+.|||..    ++|+|-+.           ...+.|||+.+|...+.+....+  . -.-..||. |++++|--.
T Consensus       250 p~Vq~idfSP~E----kYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~-DdKy~Arm~  324 (698)
T KOG2314|consen  250 PGVQFIDFSPNE----KYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSH-DDKYFARMT  324 (698)
T ss_pred             CCceeeecCCcc----ceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEecc-CCceeEEec
Confidence            456778999998    59999753           25799999999999888865322  2 23468998 888988776


Q ss_pred             cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-----CCcEEEEeccCchhhhhhc------cccc
Q psy10348         77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-----DHSLKLWDLTKPEIKDACA------ESYT  145 (291)
Q Consensus        77 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~------~~~~  145 (291)
                      .| .|.||+..+-..+..-   .-.-..|....|+|.++.||-=..     -..+.+-.+.+++.+++..      ..+-
T Consensus       325 ~~-sisIyEtpsf~lld~K---slki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLh  400 (698)
T KOG2314|consen  325 GN-SISIYETPSFMLLDKK---SLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLH  400 (698)
T ss_pred             cc-eEEEEecCceeeeccc---ccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEE
Confidence            64 5899987653322211   223467888999999888875433     2245555555555443321      1222


Q ss_pred             cCCCCccccccCccccCc----ccccc--------------cccCcceeEEEEc--CCEEEEecC---CCeEEEecCCCC
Q psy10348        146 FNPARSTRPFDTQKEHFP----QFSTR--------------DIHRNYVDCVRWL--GDFVLSKSC---ENCIICWKPGRL  202 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~----~~~~~--------------~~~~~~v~~~~~~--~~~l~~~~~---d~~i~iwd~~~~  202 (291)
                      +...+..+++...+....    .++.+              -.-...|...+|.  |+.+++-+.   ..++.+|.+.+.
T Consensus       401 WQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~  480 (698)
T KOG2314|consen  401 WQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETN  480 (698)
T ss_pred             eccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecC
Confidence            222222222221110000    00000              0123456666776  665544332   457888887642


Q ss_pred             -CccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCCCcceeEEEecccccccee
Q psy10348        203 -EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR  278 (291)
Q Consensus       203 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~  278 (291)
                       ...         +.+..+..    ..+..+.++|.|++++++.   ..|.+.++|+.....     .....+.| ...+
T Consensus       481 ~~~~---------~lVk~~dk----~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~-----k~~~~~eh-~~at  541 (698)
T KOG2314|consen  481 IKKP---------SLVKELDK----KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADL-----KDTASPEH-FAAT  541 (698)
T ss_pred             CCch---------hhhhhhcc----cccceEEEcCCCcEEEEEEecccccceEEEecchhhh-----hhccCccc-cccc
Confidence             111         22333332    2244566678899998865   578999999985322     12222222 3567


Q ss_pred             eeEEccCCceeeC
Q psy10348        279 QTTLSKNGNVLLC  291 (291)
Q Consensus       279 ~~~~s~~g~~l~s  291 (291)
                      .+.|.|.|+|+++
T Consensus       542 ~veWDPtGRYvvT  554 (698)
T KOG2314|consen  542 EVEWDPTGRYVVT  554 (698)
T ss_pred             cceECCCCCEEEE
Confidence            7999999999875

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.95  E-value=1.4e-06  Score=77.40  Aligned_cols=228  Identities=14%  Similarity=0.155  Sum_probs=139.3

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEE----ccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIF----SPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ..+.|.++.|-++.+    .++.+..+|.|.+.    +..+.. +...-.-...|.+++||| |..+|+....++++.+-
T Consensus        74 ~~~~ivs~~yl~d~~----~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSP-D~Ella~vT~~~~l~~m  147 (928)
T PF04762_consen   74 PNDKIVSFQYLADSE----SLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSP-DEELLALVTGEGNLLLM  147 (928)
T ss_pred             CCCcEEEEEeccCCC----cEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECC-CcCEEEEEeCCCEEEEE
Confidence            457889999999884    78888889999999    554333 233334467899999999 88999999989988775


Q ss_pred             ECC---------------C--------cceeeeec----------------------cccCCCCceEEEEEccCCCEEEE
Q psy10348         85 NIK---------------T--------DICIAIFG----------------------GVEGHRDEVLSADFDLLGTKIMS  119 (291)
Q Consensus        85 d~~---------------~--------~~~~~~~~----------------------~~~~~~~~i~~~~~~~~~~~l~~  119 (291)
                      +-.               .        |+.-..|+                      .+. ....-..+.|-.||.+|++
T Consensus       148 t~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAV  226 (928)
T PF04762_consen  148 TRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAV  226 (928)
T ss_pred             eccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEE
Confidence            421               0        01101110                      001 2334567899999999998


Q ss_pred             Eec---C---CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-
Q psy10348        120 CGM---D---HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-  190 (291)
Q Consensus       120 ~~~---d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-  190 (291)
                      .+.   .   ..+|||+-+ |.+..+.+.                            -.+--.+++|.  |++|++.-. 
T Consensus       227 ss~~~~~~~~R~iRVy~Re-G~L~stSE~----------------------------v~gLe~~l~WrPsG~lIA~~q~~  277 (928)
T PF04762_consen  227 SSVEPETGSRRVIRVYSRE-GELQSTSEP----------------------------VDGLEGALSWRPSGNLIASSQRL  277 (928)
T ss_pred             EEEEcCCCceeEEEEECCC-ceEEecccc----------------------------CCCccCCccCCCCCCEEEEEEEc
Confidence            875   2   478999865 543322211                            01112245664  777776654 


Q ss_pred             --CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEE
Q psy10348        191 --ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQIL  268 (291)
Q Consensus       191 --d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  268 (291)
                        ...|.+|.-+..+..           -..+........+..+.|++|+..||+...|. |.+|-..+..-  -++..+
T Consensus       278 ~~~~~VvFfErNGLrhg-----------eF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHW--YLKqei  343 (928)
T PF04762_consen  278 PDRHDVVFFERNGLRHG-----------EFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHW--YLKQEI  343 (928)
T ss_pred             CCCcEEEEEecCCcEee-----------eEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEE--EEEEEE
Confidence              356777775443321           11111112223345667778899999988665 99999988752  112222


Q ss_pred             eccccccceeeeEEccCCc
Q psy10348        269 SHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       269 ~~~~~~~~v~~~~~s~~g~  287 (291)
                      ... ....+..+.|+|...
T Consensus       344 ~~~-~~~~~~~~~Wdpe~p  361 (928)
T PF04762_consen  344 RFS-SSESVNFVKWDPEKP  361 (928)
T ss_pred             Ecc-CCCCCCceEECCCCC
Confidence            222 223455588998643

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.95  E-value=6.6e-06  Score=62.38  Aligned_cols=223  Identities=13%  Similarity=0.055  Sum_probs=131.0

Q ss_pred             EEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceee
Q psy10348         15 TCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        15 ~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      +.+|.+ ++    .++++-...+.|..|+..+++.. .+... . ...+++...++.+ +.+..++ +.++|..+++...
T Consensus         4 gp~~d~~~g----~l~~~D~~~~~i~~~~~~~~~~~-~~~~~-~-~~G~~~~~~~g~l-~v~~~~~-~~~~d~~~g~~~~   74 (246)
T PF08450_consen    4 GPVWDPRDG----RLYWVDIPGGRIYRVDPDTGEVE-VIDLP-G-PNGMAFDRPDGRL-YVADSGG-IAVVDPDTGKVTV   74 (246)
T ss_dssp             EEEEETTTT----EEEEEETTTTEEEEEETTTTEEE-EEESS-S-EEEEEEECTTSEE-EEEETTC-EEEEETTTTEEEE
T ss_pred             ceEEECCCC----EEEEEEcCCCEEEEEECCCCeEE-EEecC-C-CceEEEEccCCEE-EEEEcCc-eEEEecCCCcEEE
Confidence            567777 44    47777778899999999876543 23322 2 6777888326555 4445544 5566998875544


Q ss_pred             eeccc-cC-CCCceEEEEEccCCCEEEEEecC--------CcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         94 IFGGV-EG-HRDEVLSADFDLLGTKIMSCGMD--------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        94 ~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ..... .. .....+.+++.|+|++.++....        |.|..++.. ++......                      
T Consensus        75 ~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~----------------------  131 (246)
T PF08450_consen   75 LADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD----------------------  131 (246)
T ss_dssp             EEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE----------------------
T ss_pred             EeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec----------------------
Confidence            43211 12 45678899999999977765543        446666665 33211111                      


Q ss_pred             ccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                             .-...+.++|+  ++.| ++-+..+.|..+++........     ....+..+.........  ++.+.+|++
T Consensus       132 -------~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~g~pDG--~~vD~~G~l  197 (246)
T PF08450_consen  132 -------GLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELS-----NRRVFIDFPGGPGYPDG--LAVDSDGNL  197 (246)
T ss_dssp             -------EESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEE-----EEEEEEE-SSSSCEEEE--EEEBTTS-E
T ss_pred             -------CcccccceEECCcchheeecccccceeEEEecccccccee-----eeeeEEEcCCCCcCCCc--ceEcCCCCE
Confidence                   22335688888  5555 4667788999999864322000     00112222222222333  556677988


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE-ccCCceee
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL-SKNGNVLL  290 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~  290 (291)
                      .++....+.|.+++.. ++    ....+..+  ...+++++| -++.+.|.
T Consensus       198 ~va~~~~~~I~~~~p~-G~----~~~~i~~p--~~~~t~~~fgg~~~~~L~  241 (246)
T PF08450_consen  198 WVADWGGGRIVVFDPD-GK----LLREIELP--VPRPTNCAFGGPDGKTLY  241 (246)
T ss_dssp             EEEEETTTEEEEEETT-SC----EEEEEE-S--SSSEEEEEEESTTSSEEE
T ss_pred             EEEEcCCCEEEEECCC-cc----EEEEEcCC--CCCEEEEEEECCCCCEEE
Confidence            8887788999999987 53    33444443  237899999 46666553

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.94  E-value=4.9e-06  Score=63.16  Aligned_cols=102  Identities=13%  Similarity=0.030  Sum_probs=73.2

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCC-eEEEEccCCcceeEEEeeecccee--EEEEecCCCcEEEEe-----ecCCeEEE
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRA-VIRIFSPAFHACVRHFYGHGHAIN--ELKFHPQDFNLLLSV-----SKDHTLRL   83 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg-~i~vw~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~-----~~dg~i~v   83 (291)
                      .-..++.+|...   ..++.+-.-| ...+||..+++..+.+....+.-.  .-.|++ +|++|++.     ...|.|-|
T Consensus         6 RgH~~a~~p~~~---~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~-dG~~LytTEnd~~~g~G~IgV   81 (305)
T PF07433_consen    6 RGHGVAAHPTRP---EAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSP-DGRLLYTTENDYETGRGVIGV   81 (305)
T ss_pred             cccceeeCCCCC---eEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcC-CCCEEEEeccccCCCcEEEEE
Confidence            345677788543   4666665555 578899999988876653332211  357999 99999986     33588999


Q ss_pred             EECC-CcceeeeeccccCCCCceEEEEEccCCCEEEEE
Q psy10348         84 WNIK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC  120 (291)
Q Consensus        84 wd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  120 (291)
                      ||.. .-+.+..+   ..|.-....+.+.|+|+.|+.+
T Consensus        82 yd~~~~~~ri~E~---~s~GIGPHel~l~pDG~tLvVA  116 (305)
T PF07433_consen   82 YDAARGYRRIGEF---PSHGIGPHELLLMPDGETLVVA  116 (305)
T ss_pred             EECcCCcEEEeEe---cCCCcChhhEEEcCCCCEEEEE
Confidence            9998 44556666   6777777889999999888877

>KOG3617|consensus

Probab=98.91  E-value=1.3e-07  Score=79.28  Aligned_cols=119  Identities=21%  Similarity=0.237  Sum_probs=92.3

Q ss_pred             eeeeecceeEE-EEeeeccCCCCCEEEEecC----CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348          5 YSLLIEENFYT-CAWSMDLESGRPLLAVAGS----RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         5 ~~~~~~~~i~~-~~~s~~~~~~~~~l~~~~~----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      +++...+.+.. .+|+|..    +++|+++-    .|.|.||- ++|++.+.... .-.+++++|+| ..-.|+.|-.-|
T Consensus         9 IE~~Dsdavsti~SWHPse----PlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-P~hatSLCWHp-e~~vLa~gwe~g   81 (1416)
T KOG3617|consen    9 IEFLDSDAVSTISSWHPSE----PLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-PVHATSLCWHP-EEFVLAQGWEMG   81 (1416)
T ss_pred             eecccccccccccccCCCC----ceeEEEEecCCCCceEEEEe-cCCCCCccccc-ceehhhhccCh-HHHHHhhccccc
Confidence            44444555544 4799998    59998864    48888884 67776554431 22356799999 878899999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                      .+.+|...+.+.-...   ..|..+|..+.|+++|..++++..-|.+.+|....
T Consensus        82 ~~~v~~~~~~e~htv~---~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen   82 VSDVQKTNTTETHTVV---ETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             eeEEEecCCceeeeec---cCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence            9999998765554444   68999999999999999999999999999998864

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.90  E-value=4.1e-08  Score=72.84  Aligned_cols=225  Identities=13%  Similarity=0.174  Sum_probs=127.3

Q ss_pred             ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc--eeeeeccccCCC------------CceEEEEEccCCC--EEEE
Q psy10348         56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI--CIAIFGGVEGHR------------DEVLSADFDLLGT--KIMS  119 (291)
Q Consensus        56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~------------~~i~~~~~~~~~~--~l~~  119 (291)
                      .+.|+++.|.. .|.+|++|...|+|.++.-+...  ..+.+..+++|.            ..|..+.|..+++  .++.
T Consensus        26 ad~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          26 ADKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             cceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            46799999998 89999999999999999754322  111222224443            3577888876543  6777


Q ss_pred             EecCCcEEEEeccCchhhhhhc----cccccCCCCccc-----cccCccccCccc-----c-cccccCcceeEEEEc-CC
Q psy10348        120 CGMDHSLKLWDLTKPEIKDACA----ESYTFNPARSTR-----PFDTQKEHFPQF-----S-TRDIHRNYVDCVRWL-GD  183 (291)
Q Consensus       120 ~~~d~~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~-----~-~~~~~~~~v~~~~~~-~~  183 (291)
                      .+.|.+|++|.+......-...    ..+.+...+...     ....+..+...+     . -.++|.--|.++.++ ..
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            7889999999997654322111    111111111110     011111111111     1 115688889999998 44


Q ss_pred             EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        184 FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      ..+....|=+|.+|++.-....         --+..++.+.     .-|+...|.+.. ...+.-.+..|.|++-|++..
T Consensus       185 et~lSaDdLrINLWnl~i~D~s---------FnIVDiKP~nmeeLteVItSaeFhp~~-cn~fmYSsSkG~Ikl~DlRq~  254 (460)
T COG5170         185 ETLLSADDLRINLWNLEIIDGS---------FNIVDIKPHNMEELTEVITSAEFHPEM-CNVFMYSSSKGEIKLNDLRQS  254 (460)
T ss_pred             heeeeccceeeeeccccccCCc---------eEEEeccCccHHHHHHHHhhcccCHhH-cceEEEecCCCcEEehhhhhh
Confidence            4444566899999998654321         1111122221     223344444432 344555667899999999843


Q ss_pred             CCCcceeEEEe----c------cccccceeeeEEccCCceeeC
Q psy10348        259 DPSSIKFQILS----H------PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       259 ~~~~~~~~~~~----~------~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..-.....++.    .      ..-.+.|..+.|+++|+||++
T Consensus       255 alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIls  297 (460)
T COG5170         255 ALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILS  297 (460)
T ss_pred             hhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEE
Confidence            21111111111    1      122357889999999999975

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.89  E-value=4e-07  Score=73.68  Aligned_cols=147  Identities=9%  Similarity=-0.071  Sum_probs=94.0

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      ..+++++.+|.|.-+|..+|+.+...+...........   ++..++.++.+|.+..+|..+|+.+....    ....+.
T Consensus        66 ~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~----~~~~~~  138 (377)
T TIGR03300        66 GKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA---DGGLVFVGTEKGEVIALDAEDGKELWRAK----LSSEVL  138 (377)
T ss_pred             CEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE---cCCEEEEEcCCCEEEEEECCCCcEeeeec----cCceee
Confidence            47888888999999999999988776643322222222   34677788889999999999999887652    222222


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEE
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVL  186 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  186 (291)
                      +.-.. .+..++.++.++.+..||.++++.+........                  ... ....    ......++.++
T Consensus       139 ~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~------------------~~~-~~~~----~sp~~~~~~v~  194 (377)
T TIGR03300       139 SPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTP------------------ALT-LRGS----ASPVIADGGVL  194 (377)
T ss_pred             cCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCC------------------cee-ecCC----CCCEEECCEEE
Confidence            11111 245677788899999999999987655431000                  000 0000    01112245677


Q ss_pred             EecCCCeEEEecCCCCCc
Q psy10348        187 SKSCENCIICWKPGRLED  204 (291)
Q Consensus       187 ~~~~d~~i~iwd~~~~~~  204 (291)
                      .+..++.+..+|..+++.
T Consensus       195 ~~~~~g~v~ald~~tG~~  212 (377)
T TIGR03300       195 VGFAGGKLVALDLQTGQP  212 (377)
T ss_pred             EECCCCEEEEEEccCCCE
Confidence            777888888888877654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=98.85  E-value=5.4e-08  Score=80.10  Aligned_cols=158  Identities=13%  Similarity=0.087  Sum_probs=107.2

Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                      .......|+.|+....++++|+.||.+++..+.+...-.....            + ........-.++++|...|.-+.
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g------------l-aa~snLsmNQtLeGH~~sV~vvT   78 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG------------L-AAASNLSMNQTLEGHNASVMVVT   78 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc------------c-ccccccchhhhhccCcceEEEEE
Confidence            3456788999999999999999999999999877653222111            0 00111223456688999999999


Q ss_pred             Ec--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        180 WL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       180 ~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      |+  .+.|-+...+|.|.+|-+-.+.-            ...+...........++|..+|..++....||.|.|=.+..
T Consensus        79 WNe~~QKLTtSDt~GlIiVWmlykgsW------------~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdG  146 (1189)
T KOG2041|consen   79 WNENNQKLTTSDTSGLIIVWMLYKGSW------------CEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDG  146 (1189)
T ss_pred             eccccccccccCCCceEEEEeeecccH------------HHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecc
Confidence            99  56888889999999999876633            22222222233345566667799999999999998888876


Q ss_pred             CCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        258 QDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      +..-.   +.++.    .....+.||+|.+.+
T Consensus       147 NRIwg---KeLkg----~~l~hv~ws~D~~~~  171 (1189)
T KOG2041|consen  147 NRIWG---KELKG----QLLAHVLWSEDLEQA  171 (1189)
T ss_pred             ceecc---hhcch----heccceeecccHHHH
Confidence            53211   12221    133468899986644

>KOG1645|consensus

Probab=98.85  E-value=1.7e-07  Score=71.98  Aligned_cols=82  Identities=12%  Similarity=0.069  Sum_probs=72.3

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      +-..+...|..++|||..+   .++..++-+.+|+|.|+++...+..+..+ ..+++++|.-++.+++..|..+|.|.+|
T Consensus       188 ~lp~~g~~IrdlafSp~~~---GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~Vlvy  263 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNE---GLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVY  263 (463)
T ss_pred             cccccchhhhhhccCcccc---ceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEE
Confidence            4455678899999999985   58899999999999999999998888877 8899999998788899999999999999


Q ss_pred             ECCCcc
Q psy10348         85 NIKTDI   90 (291)
Q Consensus        85 d~~~~~   90 (291)
                      |++..+
T Consensus       264 D~R~~~  269 (463)
T KOG1645|consen  264 DMRQPE  269 (463)
T ss_pred             EccCCC
Confidence            998543

>KOG2066|consensus

Probab=98.83  E-value=8.1e-08  Score=79.82  Aligned_cols=176  Identities=14%  Similarity=0.113  Sum_probs=116.8

Q ss_pred             ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      .+.+.|++++.   ++|+-|..+|.|++.+.. +.....+    .|...      ..+|.++++++.||+|.|..+-+.+
T Consensus        39 ~D~is~~av~~---~~~~~GtH~g~v~~~~~~-~~~~~~~----~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~  104 (846)
T KOG2066|consen   39 NDAISCCAVHD---KFFALGTHRGAVYLTTCQ-GNPKTNF----DHSSS------ILEGEYVASCSDDGKVVIGSLFTDD  104 (846)
T ss_pred             hhHHHHHHhhc---ceeeeccccceEEEEecC-Ccccccc----ccccc------ccCCceEEEecCCCcEEEeeccCCc
Confidence            35677777775   799999999999999976 4443333    45443      6689999999999999999988877


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-------CCEEEEecCCCeEEEecCCCCCccccc
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-------GDFVLSKSCENCIICWKPGRLEDKELR  208 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (291)
                      ...++.                             ...++.+++++       .+.+++|+.-| +.++.-+-....   
T Consensus       105 ~~~~~d-----------------------------f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk---  151 (846)
T KOG2066|consen  105 EITQYD-----------------------------FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNK---  151 (846)
T ss_pred             cceeEe-----------------------------cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCc---
Confidence            554332                             34567777776       34789999888 878765443321   


Q ss_pred             cCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        209 TNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                            ..+ ......++|.+++  |.  |.++|=++.+| |+|||+.+++.+..........+-+.....+.|.++.+.
T Consensus       152 ------~~v-~l~~~eG~I~~i~--W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~L  219 (846)
T KOG2066|consen  152 ------DSV-VLSEGEGPIHSIK--WR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRL  219 (846)
T ss_pred             ------cce-eeecCccceEEEE--ec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeE
Confidence                  111 2334455555554  44  89999999888 999999988643322222211122233456777777665


Q ss_pred             ee
Q psy10348        289 LL  290 (291)
Q Consensus       289 l~  290 (291)
                      ++
T Consensus       220 VI  221 (846)
T KOG2066|consen  220 VI  221 (846)
T ss_pred             EE
Confidence            53

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.79  E-value=1e-06  Score=69.72  Aligned_cols=250  Identities=10%  Similarity=0.074  Sum_probs=140.6

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC---------
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH---------   79 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---------   79 (291)
                      ..-++..++|||.+    .+|++.... .|.+|....+..+..+. | ..|..+.|+| ++.+|.+-+..+         
T Consensus        31 ~~~p~~~~~~SP~G----~~l~~~~~~-~V~~~~g~~~~~l~~~~-~-~~V~~~~fSP-~~kYL~tw~~~pi~~pe~e~s  102 (561)
T COG5354          31 ENWPVAYVSESPLG----TYLFSEHAA-GVECWGGPSKAKLVRFR-H-PDVKYLDFSP-NEKYLVTWSREPIIEPEIEIS  102 (561)
T ss_pred             cCcchhheeecCcc----hheehhhcc-ceEEccccchhheeeee-c-CCceecccCc-ccceeeeeccCCccChhhccC
Confidence            45678889999999    477777664 59999988777666665 3 5589999999 999999865433         


Q ss_pred             ------eEEEEECCCcceeeeeccccC---------------------------CC---------------CceEEEEEc
Q psy10348         80 ------TLRLWNIKTDICIAIFGGVEG---------------------------HR---------------DEVLSADFD  111 (291)
Q Consensus        80 ------~i~vwd~~~~~~~~~~~~~~~---------------------------~~---------------~~i~~~~~~  111 (291)
                            .+.+||+.+|..+..+.....                           |.               ..|....|+
T Consensus       103 p~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsis  182 (561)
T COG5354         103 PFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSIS  182 (561)
T ss_pred             CccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEec
Confidence                  499999998877665521000                           00               113334444


Q ss_pred             cCCC--EEEE-----EecCCcEEEEeccCchhhhhhc------cccccCCCCccccccCc------------------cc
Q psy10348        112 LLGT--KIMS-----CGMDHSLKLWDLTKPEIKDACA------ESYTFNPARSTRPFDTQ------------------KE  160 (291)
Q Consensus       112 ~~~~--~l~~-----~~~d~~i~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------------------~~  160 (291)
                      |.++  .|+.     .+.++.+++|.+.....+.+-.      ..+.+++.+....+...                  ..
T Consensus       183 P~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~  262 (561)
T COG5354         183 PEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRI  262 (561)
T ss_pred             CCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEee
Confidence            4322  2221     2334555555555333222110      01222222221111100                  00


Q ss_pred             cCcccccccccCcceeEEEEc--CC--EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GD--FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                      ....+.....-.++|...+|.  ++  -+++|-.+..+.++|++..-             ...+.  ...-.-  ..++|
T Consensus       263 ~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl-------------~~~~P--e~~rNT--~~fsp  325 (561)
T COG5354         263 TERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNL-------------RFYFP--EQKRNT--IFFSP  325 (561)
T ss_pred             cccccceeccccccceeeeecccCCceeEEecccccceeecccccce-------------EEecC--Cccccc--ccccC
Confidence            011111112346788889996  44  34455678899999988751             11111  111112  33456


Q ss_pred             CCcEEEEEcC---CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        237 WQKILAVGNQ---SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       237 ~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+++++.++-   .|.+-+||......   ....+.  +  ...+-+.|+|||+++.
T Consensus       326 ~~r~il~agF~nl~gni~i~~~~~rf~---~~~~~~--~--~n~s~~~wspd~qF~~  375 (561)
T COG5354         326 HERYILFAGFDNLQGNIEIFDPAGRFK---VAGAFN--G--LNTSYCDWSPDGQFYD  375 (561)
T ss_pred             cccEEEEecCCccccceEEeccCCceE---EEEEee--c--CCceEeeccCCceEEE
Confidence            6999998774   47899999887631   111222  1  2334568999999874

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.77  E-value=4.2e-07  Score=73.45  Aligned_cols=102  Identities=11%  Similarity=0.127  Sum_probs=75.9

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .++.....+.|++++|+.+    .++.|+.||.|.+||...+..  .+....-..+.++|+| ++..+++|+..|.+.+|
T Consensus       254 tsipL~s~v~~ca~sp~E~----kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp-~gai~~V~s~qGelQ~F  326 (545)
T PF11768_consen  254 TSIPLPSQVICCARSPSED----KLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHP-DGAIFVVGSEQGELQCF  326 (545)
T ss_pred             EEEecCCcceEEecCcccc----eEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcC-CCcEEEEEcCCceEEEE
Confidence            4567788999999999994    999999999999999875532  2223445678999999 99999999999999999


Q ss_pred             ECCCcc-------------eeeeeccccCCCCceEEEEEccC
Q psy10348         85 NIKTDI-------------CIAIFGGVEGHRDEVLSADFDLL  113 (291)
Q Consensus        85 d~~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~  113 (291)
                      |+.-..             ..-.+...-.+...+..+.|.+.
T Consensus       327 D~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~~~L~~iqW~~~  368 (545)
T PF11768_consen  327 DMALSPIKMQLLSEDATPKSTLQLSKYFRVSSSLVHIQWAPA  368 (545)
T ss_pred             EeecCccceeeccccCCCccEEeeehhccCcchhheeEeccC
Confidence            976331             11122222345556677888743

>KOG1275|consensus

Probab=98.77  E-value=1.8e-07  Score=78.91  Aligned_cols=174  Identities=14%  Similarity=0.125  Sum_probs=123.1

Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      ++..++-|+....+..+|+++.+..+..   .-....|.-+.  .+++.+.+|...|+|.+-|+++.+.+.++.      
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~---~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~------  214 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTT---NVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFD------  214 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeee---eccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeee------
Confidence            4466777777778889999988877765   23333455555  468899999999999999999988776664      


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecC---------CCeEEEecCCCCCccccccCCCceeeee
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSC---------ENCIICWKPGRLEDKELRTNETNVTIIN  218 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~  218 (291)
                                            +|.+.|..+...|+.|++++.         |.-|+|||+++.+.            +.
T Consensus       215 ----------------------aHs~siSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmra------------l~  260 (1118)
T KOG1275|consen  215 ----------------------AHSGSISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRA------------LS  260 (1118)
T ss_pred             ----------------------ccccceeeeeccCCeEEEeecccccccccccchhhhhhhhhhhc------------cC
Confidence                                  599999999888999999885         45689999998865            33


Q ss_pred             eecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        219 RLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+..+.++ ..++|.|+- ...+++.+..|...+-|..+......  .........+.+.++.+|++|+.||
T Consensus       261 PI~~~~~P-~flrf~Psl-~t~~~V~S~sGq~q~vd~~~lsNP~~--~~~~v~p~~s~i~~fDiSsn~~ala  328 (1118)
T KOG1275|consen  261 PIQFPYGP-QFLRFHPSL-TTRLAVTSQSGQFQFVDTATLSNPPA--GVKMVNPNGSGISAFDISSNGDALA  328 (1118)
T ss_pred             CcccccCc-hhhhhcccc-cceEEEEecccceeeccccccCCCcc--ceeEEccCCCcceeEEecCCCceEE
Confidence            33333332 345555543 46788888899999999444332111  1222223445689999999998876

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.73  E-value=1e-05  Score=61.02  Aligned_cols=182  Identities=15%  Similarity=0.072  Sum_probs=110.8

Q ss_pred             CCeEEEEccCCcceeEEEeeeccceeEEE--EecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGHAINELK--FHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      +|.|..||..+|+.+....- ........  ..+ ++..+++++.++.+..||..+|+.+..+..    ...+.... ..
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~-~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~----~~~~~~~~-~~   74 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDL-GPGIGGPVATAVP-DGGRVYVASGDGNLYALDAKTGKVLWRFDL----PGPISGAP-VV   74 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEEC-SSSCSSEEETEEE-ETTEEEEEETTSEEEEEETTTSEEEEEEEC----SSCGGSGE-EE
T ss_pred             CCEEEEEECCCCCEEEEEEC-CCCCCCccceEEE-eCCEEEEEcCCCEEEEEECCCCCEEEEeec----ccccccee-ee
Confidence            68999999999999888753 21122222  232 445677778999999999999998877632    11111111 22


Q ss_pred             CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCC
Q psy10348        113 LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN  192 (291)
Q Consensus       113 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~  192 (291)
                      .+..++.++.++.++.+|..+++.+........ .+                     ..........+.++.++.+..++
T Consensus        75 ~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~-~~---------------------~~~~~~~~~~~~~~~~~~~~~~g  132 (238)
T PF13360_consen   75 DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSS-PP---------------------AGVRSSSSPAVDGDRLYVGTSSG  132 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SS-CT---------------------CSTB--SEEEEETTEEEEEETCS
T ss_pred             cccccccccceeeeEecccCCcceeeeeccccc-cc---------------------cccccccCceEecCEEEEEeccC
Confidence            355677777888999999999997665321000 00                     01111223444488888888899


Q ss_pred             eEEEecCCCCCccccccCCCceeeeeeecCCccc----E-----EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        193 CIICWKPGRLEDKELRTNETNVTIINRLNFKDCE----I-----WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       193 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i-----~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      .|..+|..+++.            +.........    +     ........  +..++.++.+|.+.-+|+.+++
T Consensus       133 ~l~~~d~~tG~~------------~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~g~~~~~d~~tg~  194 (238)
T PF13360_consen  133 KLVALDPKTGKL------------LWKYPVGEPRGSSPISSFSDINGSPVIS--DGRVYVSSGDGRVVAVDLATGE  194 (238)
T ss_dssp             EEEEEETTTTEE------------EEEEESSTT-SS--EEEETTEEEEEECC--TTEEEEECCTSSEEEEETTTTE
T ss_pred             cEEEEecCCCcE------------EEEeecCCCCCCcceeeecccccceEEE--CCEEEEEcCCCeEEEEECCCCC
Confidence            999999998865            3333322211    0     01222222  3377777777753333988885

...

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.70  E-value=8.2e-06  Score=64.84  Aligned_cols=197  Identities=14%  Similarity=0.132  Sum_probs=125.5

Q ss_pred             cceeEEEEeeeccCCCCCEEEE-----ecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee--------
Q psy10348         10 EENFYTCAWSMDLESGRPLLAV-----AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS--------   76 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~-----~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--------   76 (291)
                      ...|...+|||.++.  ..||.     .+..+.+++|.+..+..+.+-.-.+-.=..+.|++ .+++|+.--        
T Consensus       173 ~~gi~dFsisP~~n~--~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~-~g~~ll~l~~t~~ksnK  249 (561)
T COG5354         173 PVGILDFSISPEGNH--DELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQV-LGKYLLVLVMTHTKSNK  249 (561)
T ss_pred             ccceeeEEecCCCCC--ceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEec-CCceEEEEEEEeeeccc
Confidence            367888899998643  34554     35678999999987766554332233335678888 666655421        


Q ss_pred             ---cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348         77 ---KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAESYTFNPARS  151 (291)
Q Consensus        77 ---~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~  151 (291)
                         ....+.|+++.. +.+...   ..-.++|...+|.|.++.|++.+  .+..+.++|++.. ....+.          
T Consensus       250 syfgesnLyl~~~~e-~~i~V~---~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P----------  314 (561)
T COG5354         250 SYFGESNLYLLRITE-RSIPVE---KDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP----------  314 (561)
T ss_pred             ceeccceEEEEeecc-ccccee---ccccccceeeeecccCCceeEEecccccceeecccccc-eEEecC----------
Confidence               124578888873 333332   35678999999999988776544  6888999999876 222211          


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc--CCEEEEecC---CCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC---ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                          +..=+.+.|+  +++++.++-   .|.+-+||....-           .++..+.+... 
T Consensus       315 --------------------e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf-----------~~~~~~~~~n~-  362 (561)
T COG5354         315 --------------------EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF-----------KVAGAFNGLNT-  362 (561)
T ss_pred             --------------------CcccccccccCcccEEEEecCCccccceEEeccCCce-----------EEEEEeecCCc-
Confidence                                1122233444  567777555   4689999976542           22334544432 


Q ss_pred             EEEEEEEecCCCcEEEEEc------CCCcEEEEEcCCCC
Q psy10348        227 IWFIRFSMDYWQKILAVGN------QSGRTYVWDLDVQD  259 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~------~dg~i~vwd~~~~~  259 (291)
                       ..  +.|+||++++.+..      .|..|+|||+....
T Consensus       363 -s~--~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         363 -SY--CDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             -eE--eeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence             22  34557799988775      47889999998763

>KOG0882|consensus

Probab=98.68  E-value=3.5e-07  Score=71.31  Aligned_cols=196  Identities=14%  Similarity=0.112  Sum_probs=131.0

Q ss_pred             eccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccC
Q psy10348         55 HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTK  133 (291)
Q Consensus        55 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~  133 (291)
                      |.+.|+.+....  .+++.+++.||.++.|--..-.-+........|...|.+++.+-++.++.+.+. |..++++|+.+
T Consensus         8 hrd~i~hv~~tk--a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn   85 (558)
T KOG0882|consen    8 HRDVITHVFPTK--AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN   85 (558)
T ss_pred             ccceeeeEeeeh--hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence            677777776664  479999999999999975431222222222688999999999999999999777 99999999988


Q ss_pred             chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCC---EE-EEecCCCeEEEecCCCCCcccccc
Q psy10348        134 PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD---FV-LSKSCENCIICWKPGRLEDKELRT  209 (291)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l-~~~~~d~~i~iwd~~~~~~~~~~~  209 (291)
                      ...+..++.  .+                        -...+..+.-.|+   .+ ++.-.++.+.++|-....+     
T Consensus        86 ~DminmiKL--~~------------------------lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~-----  134 (558)
T KOG0882|consen   86 FDMINMIKL--VD------------------------LPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFC-----  134 (558)
T ss_pred             cchhhhccc--cc------------------------CCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcC-----
Confidence            776544331  00                        1111111111132   33 3344578999999876643     


Q ss_pred             CCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC-CCCCcc--------eeEEEeccccccceeee
Q psy10348        210 NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV-QDPSSI--------KFQILSHPRCMSAVRQT  280 (291)
Q Consensus       210 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~--------~~~~~~~~~~~~~v~~~  280 (291)
                           .....-..|..+|..+.+.+.  +..+.+....|.|.-|.... .+..+.        ...++..........++
T Consensus       135 -----q~~~fkklH~sPV~~i~y~qa--~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~  207 (558)
T KOG0882|consen  135 -----QDGYFKKLHFSPVKKIRYNQA--GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSF  207 (558)
T ss_pred             -----ccceecccccCceEEEEeecc--ccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccce
Confidence                 224455567788888888766  88999999999999999883 111111        11122333455678899


Q ss_pred             EEccCCceee
Q psy10348        281 TLSKNGNVLL  290 (291)
Q Consensus       281 ~~s~~g~~l~  290 (291)
                      .|+|+|..+.
T Consensus       208 Efsp~g~qis  217 (558)
T KOG0882|consen  208 EFSPDGAQIS  217 (558)
T ss_pred             EEccccCccc
Confidence            9999998765

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.68  E-value=2.4e-06  Score=69.23  Aligned_cols=117  Identities=9%  Similarity=0.050  Sum_probs=80.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEe----cCCCe----EEEEccCCccee--EEE-eeeccceeEEEEecCCCcEEEEeecCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVA----GSRAV----IRIFSPAFHACV--RHF-YGHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~----~~dg~----i~vw~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      ....++.||....   ..+.+.    +.+|.    -.+|++..++..  ... -.....|.+++++| +.+.|+.|+.||
T Consensus       206 ~dPl~~~Fs~~~~---~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp-~E~kLvlGC~Dg  281 (545)
T PF11768_consen  206 NDPLDVEFSLNQP---YQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSP-SEDKLVLGCEDG  281 (545)
T ss_pred             CCcEEEEccCCCC---cEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCc-ccceEEEEecCC
Confidence            3345667765332   344443    22332    346666544321  111 14567899999999 889999999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~  136 (291)
                      .|.+||...+...  +   ....-....++|+|+|..+++|+..|.+.+||+.-...
T Consensus       282 SiiLyD~~~~~t~--~---~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi  333 (545)
T PF11768_consen  282 SIILYDTTRGVTL--L---AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPI  333 (545)
T ss_pred             eEEEEEcCCCeee--e---eeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCcc
Confidence            9999998765332  2   23445678899999999999999999999999865443

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.66  E-value=3.2e-05  Score=57.28  Aligned_cols=197  Identities=15%  Similarity=0.168  Sum_probs=108.6

Q ss_pred             EEEecCCCcEEEEeecCCeEEEEECCCc--ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhh
Q psy10348         62 LKFHPQDFNLLLSVSKDHTLRLWNIKTD--ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA  139 (291)
Q Consensus        62 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~  139 (291)
                      ++.+. +|++||.- .|..|.|-..++.  ..+......+.....-+-++|+||+..||.+...|+|++||+.... +..
T Consensus         3 ~~~~~-~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~   79 (282)
T PF15492_consen    3 LALSS-DGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFV   79 (282)
T ss_pred             eeecC-CCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEE
Confidence            45556 77877774 5677877766543  2222222123444556889999999999999999999999997643 333


Q ss_pred             hccccccCCCCccccccCccccCcccccccccCcceeEEEEc--------CCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348        140 CAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--------GDFVLSKSCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      +.....+..+                     -...|..+.|-        ...|++-..+|.++-|-+..+.....    
T Consensus        80 I~p~~~~~~d---------------------~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y----  134 (282)
T PF15492_consen   80 IPPAMSFPGD---------------------LSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGY----  134 (282)
T ss_pred             cCcccccCCc---------------------cccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcc----
Confidence            3321111111                     12334444443        11345555677777666532211000    


Q ss_pred             CceeeeeeecC---CcccEEEEEEEecCCCcEEEEEcC----CC-------cEEEEEcCCCCCCcce-------------
Q psy10348        212 TNVTIINRLNF---KDCEIWFIRFSMDYWQKILAVGNQ----SG-------RTYVWDLDVQDPSSIK-------------  264 (291)
Q Consensus       212 ~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~~-------------  264 (291)
                         ...+++..   ....|..  +..+|..++|++|+.    ++       -+..|.+-++.+--+.             
T Consensus       135 ---~e~hsfsf~~~yp~Gi~~--~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~  209 (282)
T PF15492_consen  135 ---QENHSFSFSSHYPHGINS--AVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSK  209 (282)
T ss_pred             ---eeeEEEEecccCCCceeE--EEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccccccc
Confidence               11233322   2344554  445566788877762    11       2677777654321110             


Q ss_pred             ----eEEE-----e-ccccccceeeeEEccCCceeeC
Q psy10348        265 ----FQIL-----S-HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       265 ----~~~~-----~-~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                          ....     . .......|..|..||||+.||+
T Consensus       210 ~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~  246 (282)
T PF15492_consen  210 RRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLAC  246 (282)
T ss_pred             ccceeeccceeeeeccccCCCceEEEEECCCCCEEEE
Confidence                0000     0 1123467899999999999985

>KOG1645|consensus

Probab=98.65  E-value=3.8e-06  Score=64.79  Aligned_cols=95  Identities=18%  Similarity=0.282  Sum_probs=76.4

Q ss_pred             EEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCC-E
Q psy10348         38 IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-K  116 (291)
Q Consensus        38 i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~  116 (291)
                      +++.+..+.+..+.+..+...|..++|+|.+..++..++.+..|+|.|+++...+..+   ..+ ..+++++|.-+.. +
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy---~a~-~~~wSC~wDlde~h~  250 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY---IAY-NQIWSCCWDLDERHV  250 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe---ecc-CCceeeeeccCCcce
Confidence            5555555555556667788899999999955558889999999999999998888777   455 8899999988765 6


Q ss_pred             EEEEecCCcEEEEeccCchh
Q psy10348        117 IMSCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus       117 l~~~~~d~~i~v~d~~~~~~  136 (291)
                      ++.|-..|.|.+||++..+.
T Consensus       251 IYaGl~nG~VlvyD~R~~~~  270 (463)
T KOG1645|consen  251 IYAGLQNGMVLVYDMRQPEG  270 (463)
T ss_pred             eEEeccCceEEEEEccCCCc
Confidence            77777899999999987653

>KOG2114|consensus

Probab=98.64  E-value=1.6e-05  Score=67.28  Aligned_cols=199  Identities=13%  Similarity=0.123  Sum_probs=121.2

Q ss_pred             EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc-eeEEEEecCCCcEEEEeecCCe-----EEEEECCCc-
Q psy10348         17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA-INELKFHPQDFNLLLSVSKDHT-----LRLWNIKTD-   89 (291)
Q Consensus        17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~s~~~dg~-----i~vwd~~~~-   89 (291)
                      +|++.+    ..++.|+.+|.|.+.+- .-+.++.++++... |..+.... ...+|++.+.|+.     +++|+++.- 
T Consensus        30 c~~s~~----~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~-~~~~L~sv~Ed~~~np~llkiw~lek~~  103 (933)
T KOG2114|consen   30 CCSSST----GSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILN-KQNFLFSVGEDEQGNPVLLKIWDLEKVD  103 (933)
T ss_pred             EEcCCC----ceEEEeeccccEEEecc-cceeeehheecchhhhhHhhccc-CceEEEEEeecCCCCceEEEEecccccC
Confidence            344544    59999999999998874 35556888888777 55554443 5468888777654     899998643 


Q ss_pred             -----cee---eeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         90 -----ICI---AIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        90 -----~~~---~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                           .++   +.+. .......++.+++.+.+-+.+++|-.+|.|..+.-+-   .+.....                 
T Consensus       104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi---~RDrgsr-----------------  163 (933)
T KOG2114|consen  104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDI---LRDRGSR-----------------  163 (933)
T ss_pred             CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcc---hhccccc-----------------
Confidence                 122   1111 0012356788999999988999999999999885321   1111000                 


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                          ..-......+|+.+.+.  +..++-...-..|.+|.+....+           .......+.....+..++  +..
T Consensus       164 ----~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p-----------~~~~ld~~G~~lnCss~~--~~t  226 (933)
T KOG2114|consen  164 ----QDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTP-----------SLKVLDNNGISLNCSSFS--DGT  226 (933)
T ss_pred             ----eeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCc-----------ceeeeccCCccceeeecC--CCC
Confidence                00001146789999997  44423333456788898874321           133355555555554444  323


Q ss_pred             cEEEEEcCCCcEEEEEcCCCC
Q psy10348        239 KILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      ..+++++.. .+.+|+....+
T Consensus       227 ~qfIca~~e-~l~fY~sd~~~  246 (933)
T KOG2114|consen  227 YQFICAGSE-FLYFYDSDGRG  246 (933)
T ss_pred             ccEEEecCc-eEEEEcCCCcc
Confidence            335555543 58999887653

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.64  E-value=1.7e-05  Score=64.56  Aligned_cols=185  Identities=9%  Similarity=-0.058  Sum_probs=106.0

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccce-----eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCC-
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI-----NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH-  101 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-  101 (291)
                      .++.+..+|.+.-+|.++|+.+..+.......     .+-...  + ..++.++.+|.+...|..+|+.+......... 
T Consensus       162 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~--~-~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~  238 (394)
T PRK11138        162 LVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATA--F-GGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTG  238 (394)
T ss_pred             EEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEE--C-CEEEEEcCCCEEEEEEccCChhhheeccccCCC
Confidence            45556666777777777777666554221100     001111  2 24566777899999999988876654210000 


Q ss_pred             CC---ceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCccee
Q psy10348        102 RD---EVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVD  176 (291)
Q Consensus       102 ~~---~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  176 (291)
                      ..   ....+.-+|  .+..++.++.+|.+..+|..+++.+.....                              ....
T Consensus       239 ~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~------------------------------~~~~  288 (394)
T PRK11138        239 ATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREY------------------------------GSVN  288 (394)
T ss_pred             ccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecC------------------------------CCcc
Confidence            00   011111122  255677788899999999999876533210                              0011


Q ss_pred             EEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        177 CVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       177 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      .+...++.++.++.+|.+..+|..+++..            -........... .....  +.+|++++.||.+.+.|..
T Consensus       289 ~~~~~~~~vy~~~~~g~l~ald~~tG~~~------------W~~~~~~~~~~~-sp~v~--~g~l~v~~~~G~l~~ld~~  353 (394)
T PRK11138        289 DFAVDGGRIYLVDQNDRVYALDTRGGVEL------------WSQSDLLHRLLT-APVLY--NGYLVVGDSEGYLHWINRE  353 (394)
T ss_pred             CcEEECCEEEEEcCCCeEEEEECCCCcEE------------EcccccCCCccc-CCEEE--CCEEEEEeCCCEEEEEECC
Confidence            22334778888889999999999887542            111110000000 01112  6788889999999999999


Q ss_pred             CCCC
Q psy10348        257 VQDP  260 (291)
Q Consensus       257 ~~~~  260 (291)
                      +++.
T Consensus       354 tG~~  357 (394)
T PRK11138        354 DGRF  357 (394)
T ss_pred             CCCE
Confidence            9863

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.61  E-value=4e-05  Score=58.35  Aligned_cols=162  Identities=15%  Similarity=0.137  Sum_probs=101.1

Q ss_pred             EEeeeccCCCCCEEEEecC-----CCeEEEEccC-CcceeEEEeeeccceeEEEEecCCCcEEEEee-------------
Q psy10348         16 CAWSMDLESGRPLLAVAGS-----RAVIRIFSPA-FHACVRHFYGHGHAINELKFHPQDFNLLLSVS-------------   76 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~-----dg~i~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-------------   76 (291)
                      -+||+|+    ++|++.-.     .|.|-|||.. +-+.+..+..|.-.-..+.+.| +++.|+.+.             
T Consensus        56 g~fs~dG----~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~p-DG~tLvVANGGI~Thpd~GR~k  130 (305)
T PF07433_consen   56 GVFSPDG----RLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMP-DGETLVVANGGIETHPDSGRAK  130 (305)
T ss_pred             EEEcCCC----CEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcC-CCCEEEEEcCCCccCcccCcee
Confidence            5788888    48887643     4899999998 5567777877766667788999 886666652             


Q ss_pred             -----cCCeEEEEECCCcceeeeeccc--cCCCCceEEEEEccCCCEEEEEecCCc-----EEEEeccCchhhhhhcccc
Q psy10348         77 -----KDHTLRLWNIKTDICIAIFGGV--EGHRDEVLSADFDLLGTKIMSCGMDHS-----LKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        77 -----~dg~i~vwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~~~~  144 (291)
                           .+-++.+-|..+|+.+.... +  .-|...|+.+++.++|..++..-..|.     --+.-.+.++....+..  
T Consensus       131 LNl~tM~psL~~ld~~sG~ll~q~~-Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~--  207 (305)
T PF07433_consen  131 LNLDTMQPSLVYLDARSGALLEQVE-LPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPA--  207 (305)
T ss_pred             cChhhcCCceEEEecCCCceeeeee-cCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccC--
Confidence                 23345566777777766532 2  237778999999999876555433321     11111111111111100  


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCc
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLED  204 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~  204 (291)
                                         .-.....-..++-+|+++  +.++ +|+-..+.+.+||..++..
T Consensus       208 -------------------p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~  251 (305)
T PF07433_consen  208 -------------------PEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL  251 (305)
T ss_pred             -------------------ChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE
Confidence                               000011245779999998  4455 5556688999999988854

>KOG3621|consensus

Probab=98.57  E-value=1.8e-05  Score=65.54  Aligned_cols=122  Identities=10%  Similarity=0.046  Sum_probs=89.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-EeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ..+...|.--++....    ++++.|+..|.+++|+-..++.... ..+-.+.+..+..++ +..++|.|+..|.|.++-
T Consensus        30 ~~~~~~v~lTc~dst~----~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~-~e~lvAagt~~g~V~v~q  104 (726)
T KOG3621|consen   30 GFFPARVKLTCVDATE----EYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSS-VEYLVAAGTASGRVSVFQ  104 (726)
T ss_pred             ccCcceEEEEEeecCC----ceEEEecccceEEEEecCchhhhcccccCccceEEEEEecc-hhHhhhhhcCCceEEeeh
Confidence            3344444444444445    5999999999999999876654332 223445666777888 778999999999999998


Q ss_pred             CCCcceeeeec---cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         86 IKTDICIAIFG---GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        86 ~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                      +..+.+.....   .-+.|...|++++|++++..+++|...|.|..-.+..
T Consensus       105 l~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  105 LNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             hhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            87643221111   1144788999999999999999999999999988776

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.56  E-value=0.00011  Score=55.09  Aligned_cols=170  Identities=9%  Similarity=0.078  Sum_probs=98.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee-ccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH-GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +.++.++|.|+..   .++++....+.|..++.+ |+.++.+.-. .+....+++.. ++.++++.-.++.+.+.++...
T Consensus        22 ~e~SGLTy~pd~~---tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g-~~~~vl~~Er~~~L~~~~~~~~   96 (248)
T PF06977_consen   22 DELSGLTYNPDTG---TLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLG-NGRYVLSEERDQRLYIFTIDDD   96 (248)
T ss_dssp             S-EEEEEEETTTT---EEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-S-TTEEEEEETTTTEEEEEEE---
T ss_pred             CCccccEEcCCCC---eEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEEC-CCEEEEEEcCCCcEEEEEEecc
Confidence            4599999999864   588888888999999874 8888877532 24578889987 7777776656899999988432


Q ss_pred             c------eeeeec--cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         90 I------CIAIFG--GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        90 ~------~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      .      ....+.  ....++..+-.++|+|.++.|+.+-......+|.++.......+.                 ...
T Consensus        97 ~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~-----------------~~~  159 (248)
T PF06977_consen   97 TTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLF-----------------VSD  159 (248)
T ss_dssp             -TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--E-----------------EEE
T ss_pred             ccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCcccee-----------------ecc
Confidence            1      111111  112456679999999998888888877777788776522000000                 000


Q ss_pred             CcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      ...+.........+.++.++   +++++....+..|..+|. .++
T Consensus       160 ~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~-~G~  203 (248)
T PF06977_consen  160 DQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDR-QGR  203 (248)
T ss_dssp             -HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-T-T--
T ss_pred             ccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECC-CCC
Confidence            00000011133447788887   568888888999999994 443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.52  E-value=2.3e-05  Score=63.84  Aligned_cols=179  Identities=7%  Similarity=-0.002  Sum_probs=109.8

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeecc-------ceeEEEEec-CCCcEEEEeecCCeEEEEECCCcceeeeecccc
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGH-------AINELKFHP-QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVE   99 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-------~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~   99 (291)
                      .++.++.+|.+..+|.++|+.+........       ....+.-+| -.+..++.++.+|.+..+|..+|+.+....   
T Consensus       207 ~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~---  283 (394)
T PRK11138        207 GAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKRE---  283 (394)
T ss_pred             EEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeec---
Confidence            566777889999999999987665431110       000111111 012456667789999999999998876542   


Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                       ... ...+.  ..+..++.++.+|.+..+|..+++.+......                           ......+..
T Consensus       284 -~~~-~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~---------------------------~~~~~~sp~  332 (394)
T PRK11138        284 -YGS-VNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDL---------------------------LHRLLTAPV  332 (394)
T ss_pred             -CCC-ccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEccccc---------------------------CCCcccCCE
Confidence             111 11122  24667888888999999999988754322100                           000111222


Q ss_pred             EcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        180 WLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                      ..++.++.++.||.|...|..+++.            +.+.......+...-+ ..  +..|++++.||.|+.+++
T Consensus       333 v~~g~l~v~~~~G~l~~ld~~tG~~------------~~~~~~~~~~~~s~P~-~~--~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        333 LYNGYLVVGDSEGYLHWINREDGRF------------VAQQKVDSSGFLSEPV-VA--DDKLLIQARDGTVYAITR  393 (394)
T ss_pred             EECCEEEEEeCCCEEEEEECCCCCE------------EEEEEcCCCcceeCCE-EE--CCEEEEEeCCceEEEEeC
Confidence            3377888999999999999988854            4444332222222111 22  668999999999988764

>KOG1920|consensus

Probab=98.51  E-value=7.5e-05  Score=65.75  Aligned_cols=203  Identities=14%  Similarity=0.197  Sum_probs=122.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC----
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI----   86 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~----   86 (291)
                      +.|.++.|..+.+    -++.+..+|.|.+-|.++..... ...-...|.+++|+| |+..++..+.++++.+-+-    
T Consensus        69 ~~i~s~~fl~d~~----~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~-Dee~l~liT~~~tll~mT~~f~~  142 (1265)
T KOG1920|consen   69 DEIVSVQFLADTN----SICVITALGDIILVDPETLELEI-VGNVDNGISAASWSP-DEELLALITGRQTLLFMTKDFEP  142 (1265)
T ss_pred             cceEEEEEecccc----eEEEEecCCcEEEEcccccceee-eeeccCceEEEeecC-CCcEEEEEeCCcEEEEEeccccc
Confidence            5888899988885    78888888999999988765432 223457899999999 8899998888888766432    


Q ss_pred             CC-------------------cceeeeeccc---------c------C---CCCceEEEEEccCCCEEEEEec----C-C
Q psy10348         87 KT-------------------DICIAIFGGV---------E------G---HRDEVLSADFDLLGTKIMSCGM----D-H  124 (291)
Q Consensus        87 ~~-------------------~~~~~~~~~~---------~------~---~~~~i~~~~~~~~~~~l~~~~~----d-~  124 (291)
                      -.                   |+....|+.-         .      +   ..+.=..+.|--||+++++...    + +
T Consensus       143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence            11                   1111111100         0      0   1111235889999999988432    4 7


Q ss_pred             cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe---cCCCeEEEecC
Q psy10348        125 SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK---SCENCIICWKP  199 (291)
Q Consensus       125 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~---~~d~~i~iwd~  199 (291)
                      .|++||-+ +.+...-..                            ....=.+++|-  |.++++-   +.|+.|.+|.-
T Consensus       223 kirV~drE-g~Lns~se~----------------------------~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr  273 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSEP----------------------------VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER  273 (1265)
T ss_pred             eEEEeccc-chhhcccCc----------------------------ccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence            89999977 443222110                            11112355665  5555553   34668999986


Q ss_pred             CCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE---EcCCCcEEEEEcCCCC
Q psy10348        200 GRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV---GNQSGRTYVWDLDVQD  259 (291)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~---~~~dg~i~vwd~~~~~  259 (291)
                      +..+...         ..-.+......  +..++|+.++..||+   ......|++|-+.+..
T Consensus       274 NGL~hg~---------f~l~~p~de~~--ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  274 NGLRHGE---------FVLPFPLDEKE--VEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             CCccccc---------cccCCcccccc--hheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence            5543321         11112222222  334555566889888   4455569999998764

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.50  E-value=0.00022  Score=54.13  Aligned_cols=184  Identities=15%  Similarity=0.029  Sum_probs=109.3

Q ss_pred             eEEEEee-eccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEeecC--------
Q psy10348         13 FYTCAWS-MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVSKD--------   78 (291)
Q Consensus        13 i~~~~~s-~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~d--------   78 (291)
                      ...+++. +++     .++.+... .+.++|..+++.......     .....+.+++.| +|++.++....        
T Consensus        42 ~~G~~~~~~~g-----~l~v~~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~  114 (246)
T PF08450_consen   42 PNGMAFDRPDG-----RLYVADSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDP  114 (246)
T ss_dssp             EEEEEEECTTS-----EEEEEETT-CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGS
T ss_pred             CceEEEEccCC-----EEEEEEcC-ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcC-CCCEEEEecCCCccccccc
Confidence            6667777 554     55555554 456669888865444432     335678999999 88877776543        


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEE-EEecCCcEEEEeccCchh-hhhhccccccCCCCcccccc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPEI-KDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~  156 (291)
                      |.|..++.. ++.....    ..-...+.++|+|+++.|+ +-+..+.|..+++..... +....               
T Consensus       115 g~v~~~~~~-~~~~~~~----~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~---------------  174 (246)
T PF08450_consen  115 GSVYRIDPD-GKVTVVA----DGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRR---------------  174 (246)
T ss_dssp             EEEEEEETT-SEEEEEE----EEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEE---------------
T ss_pred             cceEEECCC-CeEEEEe----cCcccccceEECCcchheeecccccceeEEEeccccccceeeee---------------
Confidence            557777776 4543333    3345568999999999776 556688899999864432 11000               


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                             .+............++++  |++.++....+.|.++|.+ ++.            +..+......++.++|. 
T Consensus       175 -------~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~------------~~~i~~p~~~~t~~~fg-  233 (246)
T PF08450_consen  175 -------VFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKL------------LREIELPVPRPTNCAFG-  233 (246)
T ss_dssp             -------EEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCE------------EEEEE-SSSSEEEEEEE-
T ss_pred             -------eEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccE------------EEEEcCCCCCEEEEEEE-
Confidence                   000000112346678887  7777776678999999987 432            55555554455666663 


Q ss_pred             cCCCcEEEEE
Q psy10348        235 DYWQKILAVG  244 (291)
Q Consensus       235 ~~~~~~l~~~  244 (291)
                      .++.+.|++.
T Consensus       234 g~~~~~L~vT  243 (246)
T PF08450_consen  234 GPDGKTLYVT  243 (246)
T ss_dssp             STTSSEEEEE
T ss_pred             CCCCCEEEEE
Confidence            3445555443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1920|consensus

Probab=98.41  E-value=8.2e-05  Score=65.54  Aligned_cols=211  Identities=9%  Similarity=0.021  Sum_probs=119.3

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~  136 (291)
                      +.|.++.|.. +...++.+..+|.|.+-|.++......    ..-...|.+++|+||+..++..+.++++.+-+ .+..+
T Consensus        69 ~~i~s~~fl~-d~~~i~v~~~~G~iilvd~et~~~eiv----g~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~  142 (1265)
T KOG1920|consen   69 DEIVSVQFLA-DTNSICVITALGDIILVDPETLELEIV----GNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEP  142 (1265)
T ss_pred             cceEEEEEec-ccceEEEEecCCcEEEEcccccceeee----eeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccc
Confidence            5899999998 788888889999999998876544332    35678999999999999999998877776643 22222


Q ss_pred             hhhhccccccCCCCccc---------cccCccccCccc---c-----cccccCcceeEEEEc--CCEEEEe-----cCCC
Q psy10348        137 KDACAESYTFNPARSTR---------PFDTQKEHFPQF---S-----TRDIHRNYVDCVRWL--GDFVLSK-----SCEN  192 (291)
Q Consensus       137 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~---~-----~~~~~~~~v~~~~~~--~~~l~~~-----~~d~  192 (291)
                      +....-.....+.....         .+....+.....   .     ....-.+.=+.|.|-  |+++++.     ....
T Consensus       143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence            22111100000110000         000000000000   0     000011122357776  6688772     3238


Q ss_pred             eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCCCcceeEEEe
Q psy10348        193 CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDPSSIKFQILS  269 (291)
Q Consensus       193 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~  269 (291)
                      .|++||.. +.......         .   ....-.+  ++|-|.|.++|+-.   +|+.|.++.-+.....   ...+.
T Consensus       223 kirV~drE-g~Lns~se---------~---~~~l~~~--LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg---~f~l~  284 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSE---------P---VEGLQHS--LSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHG---EFVLP  284 (1265)
T ss_pred             eEEEeccc-chhhcccC---------c---ccccccc--eeecCCCCeEeeeeecCCCCcEEEEecCCcccc---ccccC
Confidence            99999976 32210000         0   0011113  44556699988854   5668999987654321   13333


Q ss_pred             ccccccceeeeEEccCCceeeC
Q psy10348        270 HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       270 ~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+....++..++|+.++..||.
T Consensus       285 ~p~de~~ve~L~Wns~sdiLAv  306 (1265)
T KOG1920|consen  285 FPLDEKEVEELAWNSNSDILAV  306 (1265)
T ss_pred             CcccccchheeeecCCCCceee
Confidence            3333455899999999998873

>KOG4640|consensus

Probab=98.38  E-value=2.1e-06  Score=69.95  Aligned_cols=93  Identities=19%  Similarity=0.254  Sum_probs=79.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecccee-EEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAIN-ELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      -.+.-+.|+|..    .++|++..+|.|.+..++ .+.+.++.-|...++ +++|.| ||++||.|-.||+|++.|++++
T Consensus        21 ~~i~~~ewnP~~----dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~-DGkllaVg~kdG~I~L~Dve~~   94 (665)
T KOG4640|consen   21 INIKRIEWNPKM----DLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRP-DGKLLAVGFKDGTIRLHDVEKG   94 (665)
T ss_pred             cceEEEEEcCcc----chhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecC-CCCEEEEEecCCeEEEEEccCC
Confidence            456678999998    499999999999999988 777888887777787 999999 8999999999999999999999


Q ss_pred             ceeeeeccccCCCCceEEEEEc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFD  111 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~  111 (291)
                      ..+..+  .......|.++-|.
T Consensus        95 ~~l~~~--~~s~e~~is~~~w~  114 (665)
T KOG4640|consen   95 GRLVSF--LFSVETDISKGIWD  114 (665)
T ss_pred             Cceecc--ccccccchheeecc
Confidence            877763  13456778888886

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.38  E-value=0.00034  Score=56.44  Aligned_cols=253  Identities=11%  Similarity=0.081  Sum_probs=122.2

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-------------------------------------------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-------------------------------------------   48 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-------------------------------------------   48 (291)
                      .|..++|+++.    .-|++|..+|.|.||.....+.                                           
T Consensus         3 ~v~~vs~a~~t----~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P   78 (395)
T PF08596_consen    3 SVTHVSFAPET----LELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLP   78 (395)
T ss_dssp             -EEEEEEETTT----TEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEE
T ss_pred             eEEEEEecCCC----ceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCc
Confidence            57889999886    4899999999999986432110                                           


Q ss_pred             eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeecccc------CCCCceEEEEEcc-----CC---
Q psy10348         49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVE------GHRDEVLSADFDL-----LG---  114 (291)
Q Consensus        49 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~i~~~~~~~-----~~---  114 (291)
                      ...++...++|++++.+  +--++|.|..+|.+.|.|++....+..- .+.      .....|+++.|.-     |+   
T Consensus        79 ~~l~~~~~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~-~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySS  155 (395)
T PF08596_consen   79 LTLLDAKQGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNE-NIRESFLSKSSSSYVTSIEFSVMTLGGDGYSS  155 (395)
T ss_dssp             EEEE---S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEE-EGGG--T-SS----EEEEEEEEEE-TTSSSEE
T ss_pred             hhheeccCCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeec-cccccccccccccCeeEEEEEEEecCCCcccc
Confidence            11123346899999997  4569999999999999999866555442 112      2345688888862     22   


Q ss_pred             CEEEEEecCCcEEEEeccC-chhhh--hhccccccCCCCccccccCcccc--CcccccccccCcceeEEEEcCCEEEEec
Q psy10348        115 TKIMSCGMDHSLKLWDLTK-PEIKD--ACAESYTFNPARSTRPFDTQKEH--FPQFSTRDIHRNYVDCVRWLGDFVLSKS  189 (291)
Q Consensus       115 ~~l~~~~~d~~i~v~d~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~  189 (291)
                      -.+++|+..|.+.+|.+.- ..-..  .+.... ...+.....+..+...  .+...+...-...-..+.. ..+++ ..
T Consensus       156 i~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~-~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i-~g~vV-vv  232 (395)
T PF08596_consen  156 ICLLVGTNSGNVLTFKILPSSNGRFSVQFAGAT-TNHDSPILSIIPINADTGESALATISAMQGLSKGISI-PGYVV-VV  232 (395)
T ss_dssp             EEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE---SS----EEEEEETTT--B-B-BHHHHHGGGGT-----EEEE-EE
T ss_pred             eEEEEEeCCCCEEEEEEecCCCCceEEEEeecc-ccCCCceEEEEEEECCCCCcccCchhHhhccccCCCc-CcEEE-EE
Confidence            3788999999999998852 11111  111111 0000000000000000  0000000000000000000 12333 44


Q ss_pred             CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe---cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeE
Q psy10348        190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM---DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQ  266 (291)
Q Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  266 (291)
                      .+..++++...+.+..           .+.+ ..........+..   ...+..|++-..+|.|+++.+...+.+    .
T Consensus       233 Se~~irv~~~~~~k~~-----------~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei----~  296 (395)
T PF08596_consen  233 SESDIRVFKPPKSKGA-----------HKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEI----K  296 (395)
T ss_dssp             -SSEEEEE-TT---EE-----------EEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EE----E
T ss_pred             cccceEEEeCCCCccc-----------ceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHh----h
Confidence            4788999988776542           2222 1212222223321   123677888889999999999987543    2


Q ss_pred             EEecc--ccccceeeeEEccCCceee
Q psy10348        267 ILSHP--RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       267 ~~~~~--~~~~~v~~~~~s~~g~~l~  290 (291)
                      .....  .....+....++++|..++
T Consensus       297 ~~~l~~~~d~~~~~~ssis~~Gdi~~  322 (395)
T PF08596_consen  297 SVSLPPPLDSRRLSSSSISRNGDIFY  322 (395)
T ss_dssp             EEE-SS---HHHHTT-EE-TTS-EEE
T ss_pred             cccCCCccccccccccEECCCCCEEE
Confidence            22211  1223456678888888653

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.37  E-value=0.00012  Score=63.29  Aligned_cols=142  Identities=7%  Similarity=0.015  Sum_probs=91.6

Q ss_pred             EEEEe-cCCCeEEEEccCCcceeEEEeeeccc-eeEEEEe----cCCCcEEEEeecCCeEEEEECCCcc--eeeeecccc
Q psy10348         28 LLAVA-GSRAVIRIFSPAFHACVRHFYGHGHA-INELKFH----PQDFNLLLSVSKDHTLRLWNIKTDI--CIAIFGGVE   99 (291)
Q Consensus        28 ~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~~~-v~~~~~~----~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~   99 (291)
                      +|+.- .....|+-.|+++|+.+..+..|... |..++=.    ..+...-+.|-.+..+..||.+-..  .+..-....
T Consensus       495 mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y  574 (794)
T PF08553_consen  495 MILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQY  574 (794)
T ss_pred             eEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccccc
Confidence            44443 34578999999999999999877643 4444321    1123455667778889999998543  221110012


Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                      .......|++-+.+| +||+|+.+|.||+||- .+...++.                           +.+-..+|..|.
T Consensus       575 ~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~---------------------------lp~lG~pI~~iD  625 (794)
T PF08553_consen  575 SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTA---------------------------LPGLGDPIIGID  625 (794)
T ss_pred             ccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhc---------------------------CCCCCCCeeEEE
Confidence            345567788777665 7999999999999993 33221111                           123467888888


Q ss_pred             Ec--CCEEEEecCCCeEEEecC
Q psy10348        180 WL--GDFVLSKSCENCIICWKP  199 (291)
Q Consensus       180 ~~--~~~l~~~~~d~~i~iwd~  199 (291)
                      .+  |+++++.+ +..|.+++.
T Consensus       626 vt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  626 VTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             ecCCCcEEEEee-cceEEEEEE
Confidence            87  77776544 677777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.37  E-value=0.00062  Score=53.90  Aligned_cols=180  Identities=10%  Similarity=0.155  Sum_probs=108.3

Q ss_pred             CeEEEEccCCcceeEEEeee-ccceeEEEE---ecC---CCcEEEEeec----------CCeEEEEECCCc----ceeee
Q psy10348         36 AVIRIFSPAFHACVRHFYGH-GHAINELKF---HPQ---DFNLLLSVSK----------DHTLRLWNIKTD----ICIAI   94 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~-~~~v~~~~~---~~~---~~~~l~s~~~----------dg~i~vwd~~~~----~~~~~   94 (291)
                      ..|++.|..+.+.+..+.-. ...+.+++.   ...   ...+|+.|..          .|.|.++++...    ..+..
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            46889998888877666522 233444443   321   1578887743          289999999874    23332


Q ss_pred             eccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         95 FGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                      +.. ....++|++++-- ++ +|+.+. .+.|.+|++...+ .......                           ....
T Consensus        82 i~~-~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~---------------------------~~~~  130 (321)
T PF03178_consen   82 IHS-TEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFY---------------------------DSPF  130 (321)
T ss_dssp             EEE-EEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE----------------------------BSS
T ss_pred             EEE-EeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhhee---------------------------cceE
Confidence            221 3457889988866 34 444444 5889999998877 2221110                           0223


Q ss_pred             ceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEE
Q psy10348        174 YVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVW  253 (291)
Q Consensus       174 ~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vw  253 (291)
                      .+.++...+++++.|.....+.++..+...           ..+..+.....+.+.++..+-+++..++++..+|.+.++
T Consensus       131 ~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~-----------~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l  199 (321)
T PF03178_consen  131 YITSLSVFKNYILVGDAMKSVSLLRYDEEN-----------NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVL  199 (321)
T ss_dssp             SEEEEEEETTEEEEEESSSSEEEEEEETTT-----------E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEE
T ss_pred             EEEEEeccccEEEEEEcccCEEEEEEEccC-----------CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEE
Confidence            577777779999999998888877544321           112222222233444444443335699999999999999


Q ss_pred             EcCC
Q psy10348        254 DLDV  257 (291)
Q Consensus       254 d~~~  257 (291)
                      ....
T Consensus       200 ~~~~  203 (321)
T PF03178_consen  200 RYNP  203 (321)
T ss_dssp             EE-S
T ss_pred             EECC
Confidence            9874

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.34  E-value=0.0001  Score=61.60  Aligned_cols=216  Identities=9%  Similarity=0.060  Sum_probs=119.7

Q ss_pred             cCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC----eEEEEECCCcceeeeeccccCCCCceEEE
Q psy10348         33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH----TLRLWNIKTDICIAIFGGVEGHRDEVLSA  108 (291)
Q Consensus        33 ~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~i~~~  108 (291)
                      -..+.+.+.|.++.+...++.-- +....++++| ++.++++.+.+.    ++..-+..+...+..+.     -..+  -
T Consensus       212 ey~~~vSvID~etmeV~~qV~Vd-gnpd~v~~sp-dGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn-----i~~i--e  282 (635)
T PRK02888        212 KYRSLFTAVDAETMEVAWQVMVD-GNLDNVDTDY-DGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN-----IARI--E  282 (635)
T ss_pred             ceeEEEEEEECccceEEEEEEeC-CCcccceECC-CCCEEEEeccCcccCcceeeeccccCceEEEEc-----hHHH--H
Confidence            34577888888887777776643 3446778899 778877776432    22222222222122110     0000  1


Q ss_pred             EEccCCCEEEEEecCCcEEEEeccC-----chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348        109 DFDLLGTKIMSCGMDHSLKLWDLTK-----PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--  181 (291)
Q Consensus       109 ~~~~~~~~l~~~~~d~~i~v~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  181 (291)
                      ++.++|++...+  ++.|.+.|.++     .+....+.                             -......+.++  
T Consensus       283 a~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIP-----------------------------VGKsPHGV~vSPD  331 (635)
T PRK02888        283 EAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVP-----------------------------VPKNPHGVNTSPD  331 (635)
T ss_pred             HhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEEE-----------------------------CCCCccceEECCC
Confidence            234577766653  67899999887     23222221                             12224456666  


Q ss_pred             CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC---
Q psy10348        182 GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV---  257 (291)
Q Consensus       182 ~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~---  257 (291)
                      |+++++++ .+.++.+.|+.+.+...-..-......+.+.....++   +...++++|....+--.|..|-.||+..   
T Consensus       332 GkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGP---LHTaFDg~G~aytslf~dsqv~kwn~~~a~~  408 (635)
T PRK02888        332 GKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGP---LHTAFDGRGNAYTTLFLDSQIVKWNIEAAIR  408 (635)
T ss_pred             CCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCc---ceEEECCCCCEEEeEeecceeEEEehHHHHH
Confidence            66655554 5999999999886542111111111223344333332   2345677788888888999999999986   


Q ss_pred             ---CCCCccee---EEEeccccccceeeeEEccCCceeeC
Q psy10348        258 ---QDPSSIKF---QILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       258 ---~~~~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                         ++......   .....++|.....+=.-.|||++|++
T Consensus       409 ~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~  448 (635)
T PRK02888        409 AYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVS  448 (635)
T ss_pred             HhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEE
Confidence               22221111   12223355444444556889999874

>KOG4640|consensus

Probab=98.31  E-value=4e-06  Score=68.38  Aligned_cols=78  Identities=14%  Similarity=0.144  Sum_probs=68.9

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE-EEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL-SADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      ..+.-+.|+| .-.++|.+..+|.|.+..+. -+.+..+   .-++.+++ +++|.|||+.|+.|-.||+|++.|..++.
T Consensus        21 ~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwti---p~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~   95 (665)
T KOG4640|consen   21 INIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTI---PIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG   95 (665)
T ss_pred             cceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEec---cCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence            4577899999 88999999999999999988 6777777   55777777 99999999999999999999999999988


Q ss_pred             hhhh
Q psy10348        136 IKDA  139 (291)
Q Consensus       136 ~~~~  139 (291)
                      .+..
T Consensus        96 ~l~~   99 (665)
T KOG4640|consen   96 RLVS   99 (665)
T ss_pred             ceec
Confidence            7654

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.30  E-value=0.00022  Score=45.46  Aligned_cols=104  Identities=13%  Similarity=0.066  Sum_probs=71.5

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI   92 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~   92 (291)
                      |+++++..-...+..-|++|+.|..||+|+-  .+.+..+.. .+.|++++-.. . ..|+.+-.+|+|-+|+-.  ..+
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~-~-~~F~Y~l~NGTVGvY~~~--~Rl   74 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLG-G-GRFAYALANGTVGVYDRS--QRL   74 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcC-C-CEEEEEecCCEEEEEeCc--cee
Confidence            6677777644334478999999999999984  366666664 46678887775 4 678999999999999853  334


Q ss_pred             eeeccccCCCCceEEEEEcc-CC---CEEEEEecCCcEE
Q psy10348         93 AIFGGVEGHRDEVLSADFDL-LG---TKIMSCGMDHSLK  127 (291)
Q Consensus        93 ~~~~~~~~~~~~i~~~~~~~-~~---~~l~~~~~d~~i~  127 (291)
                      ...   + .+..+.++++.. ++   .-|++|-.+|.|-
T Consensus        75 WRi---K-SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   75 WRI---K-SKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eee---c-cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            444   2 333455655533 32   2688888788764

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.30  E-value=0.0003  Score=52.71  Aligned_cols=208  Identities=9%  Similarity=0.086  Sum_probs=104.6

Q ss_pred             EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         51 HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        51 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      .+.+-...+..++|+|+++.++++....+.|...+.+ |+.++.+. +.+ .+....+++..++.++++.-.++.+.+++
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~-l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~   92 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIP-LDG-FGDYEGITYLGNGRYVLSEERDQRLYIFT   92 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE--SS--SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEe-CCC-CCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence            3444456799999999667788888889999888874 77777663 122 45678899987887777666689999999


Q ss_pred             ccCchhhhhhcc--ccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC---
Q psy10348        131 LTKPEIKDACAE--SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE---  203 (291)
Q Consensus       131 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---  203 (291)
                      +...........  .+.                   +.....++..+-.++|+  ++.|+.+-...-..+|.+....   
T Consensus        93 ~~~~~~~~~~~~~~~~~-------------------l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~  153 (248)
T PF06977_consen   93 IDDDTTSLDRADVQKIS-------------------LGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGF  153 (248)
T ss_dssp             E----TT--EEEEEEEE----------------------S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS
T ss_pred             EeccccccchhhceEEe-------------------cccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCcc
Confidence            854332111100  000                   00011255668899998  5666666666666666655411   


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc--c-----ccc
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR--C-----MSA  276 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~-----~~~  276 (291)
                      .......    ..+.........+..+.+.+ ..+.+++.......|..+| .+++.    ...+...+  |     -..
T Consensus       154 ~~~~~~~----~~~~~~~~~~~d~S~l~~~p-~t~~lliLS~es~~l~~~d-~~G~~----~~~~~L~~g~~gl~~~~~Q  223 (248)
T PF06977_consen  154 DLFVSDD----QDLDDDKLFVRDLSGLSYDP-RTGHLLILSDESRLLLELD-RQGRV----VSSLSLDRGFHGLSKDIPQ  223 (248)
T ss_dssp             --EEEE-----HHHH-HT--SS---EEEEET-TTTEEEEEETTTTEEEEE--TT--E----EEEEE-STTGGG-SS---S
T ss_pred             ceeeccc----cccccccceeccccceEEcC-CCCeEEEEECCCCeEEEEC-CCCCE----EEEEEeCCcccCcccccCC
Confidence            1000000    00000111122234444443 2367777788888898888 44432    22222221  1     125


Q ss_pred             eeeeEEccCCceee
Q psy10348        277 VRQTTLSKNGNVLL  290 (291)
Q Consensus       277 v~~~~~s~~g~~l~  290 (291)
                      .-.|+|.++|++.+
T Consensus       224 pEGIa~d~~G~LYI  237 (248)
T PF06977_consen  224 PEGIAFDPDGNLYI  237 (248)
T ss_dssp             EEEEEE-TT--EEE
T ss_pred             ccEEEECCCCCEEE
Confidence            67899999998765

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=98.29  E-value=0.00023  Score=56.59  Aligned_cols=230  Identities=14%  Similarity=0.102  Sum_probs=100.2

Q ss_pred             CCEEEEec-CCCeEEEEccCCc----ceeEEEee---ec----cceeEEEEecCCCcEEEEee--c----CCeEEEEECC
Q psy10348         26 RPLLAVAG-SRAVIRIFSPAFH----ACVRHFYG---HG----HAINELKFHPQDFNLLLSVS--K----DHTLRLWNIK   87 (291)
Q Consensus        26 ~~~l~~~~-~dg~i~vw~~~~~----~~~~~~~~---~~----~~v~~~~~~~~~~~~l~s~~--~----dg~i~vwd~~   87 (291)
                      .++|+..+ .++.|+|.|+.+.    ++.+.++.   +.    ..-..+-.-| +|..++++-  .    -|-+.+.|-+
T Consensus        87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp-~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLP-DGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-S-S--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecC-CccEEEEeccCCCCCCCCcEEEEcCc
Confidence            35666655 7889999998743    44455442   11    1122334456 788888852  2    2558888888


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEe--------------------cCCcEEEEeccCchhhhhhccccccC
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG--------------------MDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------------------~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      +.+.......-.+....-+.+-|.|..+.++|+.                    ...++++||+.+.+.++++.-.    
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg----  241 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLG----  241 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-----
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecC----
Confidence            7766666532122334456788888888888763                    2457999999999987766420    


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc--C--C-EEEEecCCCeEEEecC-CCCCccccccCCCceeeeeeec
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G--D-FVLSKSCENCIICWKP-GRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~--~-~l~~~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                      .                      .......|.|.  +  . -++.+.-.+.|-.|-- ..++ ...       +.+..+.
T Consensus       242 ~----------------------~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~-W~a-------~kVi~ip  291 (461)
T PF05694_consen  242 E----------------------EGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGE-WAA-------EKVIDIP  291 (461)
T ss_dssp             T----------------------TEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTE-EEE-------EEEEEE-
T ss_pred             C----------------------CCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCC-eee-------eEEEECC
Confidence            0                      11124455554  1  1 1222223344443332 2221 100       1111111


Q ss_pred             C--------Ccc-------cEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEe-------------ccc
Q psy10348        222 F--------KDC-------EIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILS-------------HPR  272 (291)
Q Consensus       222 ~--------~~~-------~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~-------------~~~  272 (291)
                      .        ..-       +-...++..+.|.++|.+.+ .+|.|+.||+......+..-...-             ...
T Consensus       292 ~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~  371 (461)
T PF05694_consen  292 AKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKR  371 (461)
T ss_dssp             -EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS----
T ss_pred             CcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccc
Confidence            1        010       11234555666799998877 799999999998764322212111             011


Q ss_pred             cccceeeeEEccCCceee
Q psy10348        273 CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       273 ~~~~v~~~~~s~~g~~l~  290 (291)
                      ..+...-++.|-||+.|.
T Consensus       372 l~GgPqMvqlS~DGkRlY  389 (461)
T PF05694_consen  372 LRGGPQMVQLSLDGKRLY  389 (461)
T ss_dssp             --S----EEE-TTSSEEE
T ss_pred             cCCCCCeEEEccCCeEEE
Confidence            223457789999999874

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.22  E-value=0.0013  Score=50.88  Aligned_cols=149  Identities=11%  Similarity=0.123  Sum_probs=85.4

Q ss_pred             CCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeec---------
Q psy10348         26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFG---------   96 (291)
Q Consensus        26 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---------   96 (291)
                      ++.|+.|..+| +.+++.........+. +..+|..+...| +-+.|++-+ |+.+.++++..-.......         
T Consensus         7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~   82 (275)
T PF00780_consen    7 GDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS   82 (275)
T ss_pred             CCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEec-ccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence            36899999988 9999983333222332 234499999999 656666554 5999999987544333110         


Q ss_pred             --cccCCCCceEEEE--EccCCCEEEEEecCCcEEEEeccCchhhh-hhccccccCCCCccccccCccccCccccccccc
Q psy10348         97 --GVEGHRDEVLSAD--FDLLGTKIMSCGMDHSLKLWDLTKPEIKD-ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH  171 (291)
Q Consensus        97 --~~~~~~~~i~~~~--~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (291)
                        ........+...+  -...+...+.......|.+|......... .....+                         .-
T Consensus        83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~-------------------------~l  137 (275)
T PF00780_consen   83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI-------------------------SL  137 (275)
T ss_pred             ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE-------------------------Ec
Confidence              0012233444444  12234444444556689998887642111 110000                         03


Q ss_pred             CcceeEEEEcCCEEEEecCCCeEEEecCCCCCc
Q psy10348        172 RNYVDCVRWLGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       172 ~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      ...+..++|.++.++.|..++ ..+.|+.++..
T Consensus       138 p~~~~~i~~~~~~i~v~~~~~-f~~idl~~~~~  169 (275)
T PF00780_consen  138 PDPPSSIAFLGNKICVGTSKG-FYLIDLNTGSP  169 (275)
T ss_pred             CCCcEEEEEeCCEEEEEeCCc-eEEEecCCCCc
Confidence            456778888888777776444 55666664433

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>smart00320 WD40 WD40 repeats

Probab=98.17  E-value=7.8e-06  Score=41.63  Aligned_cols=39  Identities=31%  Similarity=0.607  Sum_probs=34.0

Q ss_pred             cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348         46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus        46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ++.+..+..|...|.++.|++ ++.++++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSP-DGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence            345667778899999999999 779999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.13  E-value=0.0024  Score=50.59  Aligned_cols=213  Identities=11%  Similarity=0.051  Sum_probs=119.5

Q ss_pred             eeeeeecceeEEEEeeeccCC---CCCEEEEecC---------C-CeEEEEccCCc----ceeEEE--eeeccceeEEEE
Q psy10348          4 RYSLLIEENFYTCAWSMDLES---GRPLLAVAGS---------R-AVIRIFSPAFH----ACVRHF--YGHGHAINELKF   64 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~---~~~~l~~~~~---------d-g~i~vw~~~~~----~~~~~~--~~~~~~v~~~~~   64 (291)
                      .+.+...+.+.+++...-...   ...++++|..         . |.|.++++...    ..+..+  ....++|++++-
T Consensus        17 ~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~   96 (321)
T PF03178_consen   17 SFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICS   96 (321)
T ss_dssp             EEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEE
T ss_pred             EEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhh
Confidence            567777888887776542211   1358888754         2 89999999874    223222  245788999887


Q ss_pred             ecCCCcEEEEeecCCeEEEEECCCcc-eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch-hhhhhcc
Q psy10348         65 HPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAE  142 (291)
Q Consensus        65 ~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~  142 (291)
                      ..  +. |+.+. ++.|.+|++...+ ....- . ......+.++...  +++++.|.....+.++..+... ....+. 
T Consensus        97 ~~--~~-lv~~~-g~~l~v~~l~~~~~l~~~~-~-~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va-  167 (321)
T PF03178_consen   97 FN--GR-LVVAV-GNKLYVYDLDNSKTLLKKA-F-YDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVA-  167 (321)
T ss_dssp             ET--TE-EEEEE-TTEEEEEEEETTSSEEEEE-E-E-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEE-
T ss_pred             hC--CE-EEEee-cCEEEEEEccCcccchhhh-e-ecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEE-
Confidence            74  34 44433 4789999998777 33322 1 1222356666554  6699999998889988655411 111111 


Q ss_pred             ccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC-ceeeeee
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET-NVTIINR  219 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~  219 (291)
                                               .+.....++++.|-  ++.++.+..+|.+.++..........  ... .......
T Consensus       168 -------------------------~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~--~~~~~L~~~~~  220 (321)
T PF03178_consen  168 -------------------------RDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR--DGDPKLERISS  220 (321)
T ss_dssp             -------------------------EESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT--TTTTBEEEEEE
T ss_pred             -------------------------ecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc--cccccceeEEE
Confidence                                     11234557777775  55999999999999998753211100  001 1223444


Q ss_pred             ecCCcccEEEE-EEEecC--CC------cEEEEEcCCCcEEEE
Q psy10348        220 LNFKDCEIWFI-RFSMDY--WQ------KILAVGNQSGRTYVW  253 (291)
Q Consensus       220 ~~~~~~~i~~~-~~~~~~--~~------~~l~~~~~dg~i~vw  253 (291)
                      +..... +..+ ..+..|  .+      ..++.++.+|.|.+.
T Consensus       221 f~lg~~-v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  221 FHLGDI-VNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             EE-SS--EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             EECCCc-cceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            444433 3333 223333  11      247778889988844

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG1832|consensus

Probab=98.13  E-value=2.9e-06  Score=72.06  Aligned_cols=145  Identities=12%  Similarity=0.181  Sum_probs=101.3

Q ss_pred             cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEE
Q psy10348         99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCV  178 (291)
Q Consensus        99 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  178 (291)
                      ..|+...+|++|+-..+.|+.|+..|.|++|++.+|......                            +.|.+.|+.+
T Consensus      1098 rd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~----------------------------ncH~SavT~v 1149 (1516)
T KOG1832|consen 1098 RDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV----------------------------NCHQSAVTLV 1149 (1516)
T ss_pred             hccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc----------------------------cccccccccc
Confidence            678889999999999999999999999999999999865443                            3489999999


Q ss_pred             EEc--CCEEEEecC-CC-eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        179 RWL--GDFVLSKSC-EN-CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       179 ~~~--~~~l~~~~~-d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      .-+  |..+++.+. .. ...+|++.+...           ..++|....    ++.|+.+  -..-+.|+.-....+||
T Consensus      1150 ePs~dgs~~Ltsss~S~PlsaLW~~~s~~~-----------~~Hsf~ed~----~vkFsn~--~q~r~~gt~~d~a~~YD 1212 (1516)
T KOG1832|consen 1150 EPSVDGSTQLTSSSSSSPLSALWDASSTGG-----------PRHSFDEDK----AVKFSNS--LQFRALGTEADDALLYD 1212 (1516)
T ss_pred             cccCCcceeeeeccccCchHHHhccccccC-----------ccccccccc----eeehhhh--HHHHHhcccccceEEEe
Confidence            887  665555444 33 567899876322           245555433    4556554  44555566556799999


Q ss_pred             cCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        255 LDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.++.+..+.+....  +.+..=+...|||+..+++
T Consensus      1213 vqT~~~l~tylt~~~--~~~y~~n~a~FsP~D~LIl 1246 (1516)
T KOG1832|consen 1213 VQTCSPLQTYLTDTV--TSSYSNNLAHFSPCDTLIL 1246 (1516)
T ss_pred             cccCcHHHHhcCcch--hhhhhccccccCCCcceEe
Confidence            999976554322221  2223336788999888764

>KOG4649|consensus

Probab=98.12  E-value=0.0016  Score=48.08  Aligned_cols=109  Identities=15%  Similarity=0.052  Sum_probs=81.6

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      .+++.|+..+.+.--|..+|+.+..-. -...+.+-+.-  -+++++.|+..|.+++.+.++|.....+..+..  -. .
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v--vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~--vk-~   97 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV--VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILET--VK-V   97 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE--ECCEEEEEEccCcEEEEEecchhheeeeeehhh--hc-c
Confidence            588899999999999999998765432 23344443433  346899999999999999999988877732111  11 2


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      .....+++..+..++.|+..+..|.++..++.+.+
T Consensus        98 ~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen   98 RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK  132 (354)
T ss_pred             ceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence            34457789999999999999999999988776543

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.12  E-value=0.0035  Score=52.66  Aligned_cols=105  Identities=13%  Similarity=0.134  Sum_probs=67.0

Q ss_pred             CCCeEEEEccCCcceeEEEeeeccc--------------------e-eEEEEecCCCcEEEEeecCC-------------
Q psy10348         34 SRAVIRIFSPAFHACVRHFYGHGHA--------------------I-NELKFHPQDFNLLLSVSKDH-------------   79 (291)
Q Consensus        34 ~dg~i~vw~~~~~~~~~~~~~~~~~--------------------v-~~~~~~~~~~~~l~s~~~dg-------------   79 (291)
                      .+|.+.-+|.++|+.+..++.....                    + ...++.+ .+..++.++.++             
T Consensus       173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~-~~g~V~vg~~~g~~~~~~~~~~~~~  251 (488)
T cd00216         173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDP-KTNLVYVGTGNGSPWNWGGRRTPGD  251 (488)
T ss_pred             CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeC-CCCEEEEECCCCCCCccCCccCCCC
Confidence            3678999999999988777532110                    1 1233444 445677776554             


Q ss_pred             -----eEEEEECCCcceeeeeccccCCCC--------ce-EEEEEccCCC---EEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         80 -----TLRLWNIKTDICIAIFGGVEGHRD--------EV-LSADFDLLGT---KIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        80 -----~i~vwd~~~~~~~~~~~~~~~~~~--------~i-~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                           .|.-.|.++|+....++. ..+..        ++ ..+. .-++.   .++.++.+|.+...|.++++.+....
T Consensus       252 ~~~~~~l~Ald~~tG~~~W~~~~-~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~  328 (488)
T cd00216         252 NLYTDSIVALDADTGKVKWFYQT-TPHDLWDYDGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARP  328 (488)
T ss_pred             CCceeeEEEEcCCCCCEEEEeeC-CCCCCcccccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeE
Confidence                 799999999999887632 11211        11 1111 01333   57788889999999999999776543

The alignment model contains an 8-bladed beta-propeller.

>KOG1008|consensus

Probab=98.09  E-value=3.6e-06  Score=68.83  Aligned_cols=167  Identities=11%  Similarity=0.085  Sum_probs=108.2

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEec----CCCeEEEEccCCc--cee--EEEee-eccceeEEEEecCCCcEEE
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAG----SRAVIRIFSPAFH--ACV--RHFYG-HGHAINELKFHPQDFNLLL   73 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~----~dg~i~vw~~~~~--~~~--~~~~~-~~~~v~~~~~~~~~~~~l~   73 (291)
                      .++...+....++++|++-..   ..||+|-    .|..+.|||+.++  .+.  ..+.+ -.....+++|.. +.+++.
T Consensus        95 ~E~tp~~ar~Ct~lAwneLDt---n~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlr-d~klvl  170 (783)
T KOG1008|consen   95 AEVTPGYARPCTSLAWNELDT---NHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLR-DTKLVL  170 (783)
T ss_pred             ceecccccccccccccccccH---HHHHhhhhhhcccCCccceecccccCCCccccccccccccCcccccccc-Ccchhh
Confidence            456667788999999998643   5788874    3568999999876  222  12222 334566899996 889999


Q ss_pred             EeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEec-cCch-hhhhhccccccCCCC
Q psy10348         74 SVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDL-TKPE-IKDACAESYTFNPAR  150 (291)
Q Consensus        74 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~-~~~~-~~~~~~~~~~~~~~~  150 (291)
                      +|.....+.++|++... ....   .-.+..+..+...| .+.++++-. ||.|.+||. +.-+ +...+....      
T Consensus       171 aGm~sr~~~ifdlRqs~-~~~~---svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~------  239 (783)
T KOG1008|consen  171 AGMTSRSVHIFDLRQSL-DSVS---SVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNE------  239 (783)
T ss_pred             cccccchhhhhhhhhhh-hhhh---hhhhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCC------
Confidence            99999999999998322 1111   12344667778888 677777666 999999993 3322 222211100      


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc---CCEEEEecC-CCeEEEecCCCC
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSC-ENCIICWKPGRL  202 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~-d~~i~iwd~~~~  202 (291)
                                        +.....+..++|.   ...+++... .++|+.+|+...
T Consensus       240 ------------------N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v  277 (783)
T KOG1008|consen  240 ------------------NKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVV  277 (783)
T ss_pred             ------------------CCcccceeeEEeccCCcchhhhhccCcceEEEeccccc
Confidence                              0022357788887   334555544 679999998654

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.07  E-value=0.0016  Score=53.33  Aligned_cols=147  Identities=15%  Similarity=0.151  Sum_probs=75.7

Q ss_pred             CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      |.+|+..+. +.|.+||+++++.+..+   . . .+|..+.|++++.+++..+.+ .+.+++.........       ..
T Consensus       117 G~LL~~~~~-~~i~~yDw~~~~~i~~i---~-v-~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~-------~~  182 (443)
T PF04053_consen  117 GNLLGVKSS-DFICFYDWETGKLIRRI---D-V-SAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAI-------PE  182 (443)
T ss_dssp             SSSEEEEET-TEEEEE-TTT--EEEEE---S-S--E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHB-------TT
T ss_pred             CcEEEEECC-CCEEEEEhhHcceeeEE---e-c-CCCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccc-------cc
Confidence            566666554 48999999999999988   2 2 248999999999999988854 688877544322110       00


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                      ++-          ...+.....-...|.+..|.++.++-.+.. .|+.+  -.++.          ..+..+   ..+++
T Consensus       183 ~g~----------e~~f~~~~E~~~~IkSg~W~~d~fiYtT~~-~lkYl--~~Ge~----------~~i~~l---d~~~y  236 (443)
T PF04053_consen  183 EGV----------EDAFELIHEISERIKSGCWVEDCFIYTTSN-HLKYL--VNGET----------GIIAHL---DKPLY  236 (443)
T ss_dssp             TB-----------GGGEEEEEEE-S--SEEEEETTEEEEE-TT-EEEEE--ETTEE----------EEEEE----SS--E
T ss_pred             cCc----------hhceEEEEEecceeEEEEEEcCEEEEEcCC-eEEEE--EcCCc----------ceEEEc---CCceE
Confidence            000          001111111246788999987755554444 77663  33322          223333   34566


Q ss_pred             EEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        229 FIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      .+.+.+  +...+.....|+.|..+.+..
T Consensus       237 llgy~~--~~~~ly~~Dr~~~v~~~~ld~  263 (443)
T PF04053_consen  237 LLGYLP--KENRLYLIDRDGNVISYELDL  263 (443)
T ss_dssp             EEEEET--TTTEEEEE-TT--EEEEE--H
T ss_pred             EEEEEc--cCCEEEEEECCCCEEEEEECH
Confidence            666664  367888888888888887764

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG3621|consensus

Probab=98.06  E-value=2.1e-05  Score=65.11  Aligned_cols=104  Identities=18%  Similarity=0.193  Sum_probs=74.9

Q ss_pred             eeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        175 VDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       175 v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      .+|++-.+++++.|+.-|.+.+|+-..+...           .....+...  ..+..+.+++..++|.|+..|.|.++-
T Consensus        38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-----------~~~~~~~~~--~~~~~~vs~~e~lvAagt~~g~V~v~q  104 (726)
T KOG3621|consen   38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-----------KLKNEGATG--ITCVRSVSSVEYLVAAGTASGRVSVFQ  104 (726)
T ss_pred             EEEeecCCceEEEecccceEEEEecCchhhh-----------cccccCccc--eEEEEEecchhHhhhhhcCCceEEeeh
Confidence            4555556899999999999999997766542           222222222  233445567799999999999999999


Q ss_pred             cCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        255 LDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +....+....+..-....|...|++++|++|+..+.+
T Consensus       105 l~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ys  141 (726)
T KOG3621|consen  105 LNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYS  141 (726)
T ss_pred             hhccCCCcceeeccccccCCceEEEEEecccccEEee
Confidence            9986655444444444467889999999999988753

>smart00320 WD40 WD40 repeats

Probab=98.02  E-value=2.2e-05  Score=39.87  Aligned_cols=38  Identities=32%  Similarity=0.515  Sum_probs=32.5

Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      +....+   ..|...|.++.|++++..+++++.|+.+++|+
T Consensus         3 ~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTL---KGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEE---EecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            344455   57888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PHA02713 hypothetical protein; Provisional

Probab=98.01  E-value=0.00061  Score=57.98  Aligned_cols=69  Identities=10%  Similarity=0.130  Sum_probs=39.6

Q ss_pred             EEEEcCCEEEEecCC------CeEEEecCCC-CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC-
Q psy10348        177 CVRWLGDFVLSKSCE------NCIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG-  248 (291)
Q Consensus       177 ~~~~~~~~l~~~~~d------~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg-  248 (291)
                      .+.+.+.+.+.|+.+      ..+..||..+ .+-          ..+..+........  ....+  +++.++|+.|| 
T Consensus       459 ~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W----------~~~~~m~~~r~~~~--~~~~~--~~iyv~Gg~~~~  524 (557)
T PHA02713        459 VVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGW----------ELITTTESRLSALH--TILHD--NTIMMLHCYESY  524 (557)
T ss_pred             EEEECCEEEEEeCCCCCCccceeEEEecCCCCCCe----------eEccccCcccccce--eEEEC--CEEEEEeeecce
Confidence            344446666667654      2467788776 322          22233322222221  22333  88999999888 


Q ss_pred             -cEEEEEcCCCC
Q psy10348        249 -RTYVWDLDVQD  259 (291)
Q Consensus       249 -~i~vwd~~~~~  259 (291)
                       .+..||..+.+
T Consensus       525 ~~~e~yd~~~~~  536 (557)
T PHA02713        525 MLQDTFNVYTYE  536 (557)
T ss_pred             eehhhcCccccc
Confidence             78888888765

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.00  E-value=0.0012  Score=42.21  Aligned_cols=67  Identities=18%  Similarity=0.096  Sum_probs=50.3

Q ss_pred             eeEEEEecC---CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         59 INELKFHPQ---DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        59 v~~~~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      |++|++..-   ..+.|++|+.|..|++|+-.  +.+..+    .-...|.+++-... ..|+.+-.+|+|-+|+-.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei----~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~   71 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEI----TETDKVTSLCSLGG-GRFAYALANGTVGVYDRS   71 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEE----ecccceEEEEEcCC-CEEEEEecCCEEEEEeCc
Confidence            566776542   33689999999999999843  566665    45677888877655 679999999999999763

>KOG3617|consensus

Probab=97.92  E-value=0.00034  Score=59.81  Aligned_cols=71  Identities=15%  Similarity=0.218  Sum_probs=63.0

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .+++++|+|..    -.|+.|-.-|.+.+|...+.+.......|..+|..+.|++ +|..+.++..-|.|.+|...
T Consensus        61 hatSLCWHpe~----~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~-~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   61 HATSLCWHPEE----FVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSH-DGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             ehhhhccChHH----HHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecC-CCCeEEEcCCCceeEEEEee
Confidence            34578999987    4888999999999999988887777778999999999999 99999999999999999765

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.90  E-value=0.0088  Score=48.98  Aligned_cols=51  Identities=20%  Similarity=0.271  Sum_probs=39.4

Q ss_pred             eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         37 VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      .|+||+.. |+++..+.-..+.+.++.|+. + ..|+....||.++++|+. |+.
T Consensus        62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~-~-e~LvvV~~dG~v~vy~~~-G~~  112 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTD-D-EELVVVQSDGTVRVYDLF-GEF  112 (410)
T ss_pred             EEEEECCC-CCEeEEEEECCCCEEEEEECC-C-CeEEEEEcCCEEEEEeCC-Cce
Confidence            58899865 777877765558999999997 5 455566789999999987 444

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.89  E-value=0.0085  Score=48.65  Aligned_cols=199  Identities=14%  Similarity=0.047  Sum_probs=122.8

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec---CCeEEEEECCCcc
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK---DHTLRLWNIKTDI   90 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~   90 (291)
                      ..++.++.++   +.++....++.|.+.|..+.+......- ......+++++ ++..+..+..   ++++.+.|..+++
T Consensus        77 ~~i~v~~~~~---~vyv~~~~~~~v~vid~~~~~~~~~~~v-G~~P~~~~~~~-~~~~vYV~n~~~~~~~vsvid~~t~~  151 (381)
T COG3391          77 AGVAVNPAGN---KVYVTTGDSNTVSVIDTATNTVLGSIPV-GLGPVGLAVDP-DGKYVYVANAGNGNNTVSVIDAATNK  151 (381)
T ss_pred             cceeeCCCCC---eEEEecCCCCeEEEEcCcccceeeEeee-ccCCceEEECC-CCCEEEEEecccCCceEEEEeCCCCe
Confidence            3556666664   4666666678999999887777666542 22567899999 6666555544   6889999998888


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      .....   ..-..+ ..++++|+|..++.+. .++.|.+.|.......+ -.....                       .
T Consensus       152 ~~~~~---~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~-----------------------~  203 (381)
T COG3391         152 VTATI---PVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSL-----------------------V  203 (381)
T ss_pred             EEEEE---ecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccc-----------------------c
Confidence            77775   222234 8899999999766655 68999999976655432 000000                       0


Q ss_pred             ccCcceeEEEEc--CCEEEEecC---CCeEEEecCCCCCccccccCCCceeeeee-ecCCcccEEEEEEEecCCCcEEEE
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSC---ENCIICWKPGRLEDKELRTNETNVTIINR-LNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .-...-..+.++  +++++....   ++.+...|..+....            .. ......  .......+|+|.++.+
T Consensus       204 ~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~------------~~~~~~~~~--~~~~v~~~p~g~~~yv  269 (381)
T COG3391         204 GVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVT------------ATDLPVGSG--APRGVAVDPAGKAAYV  269 (381)
T ss_pred             ccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEE------------EeccccccC--CCCceeECCCCCEEEE
Confidence            001111233333  554444333   258888888776431            11 111111  1123455677999988


Q ss_pred             Ec-CCCcEEEEEcCCCC
Q psy10348        244 GN-QSGRTYVWDLDVQD  259 (291)
Q Consensus       244 ~~-~dg~i~vwd~~~~~  259 (291)
                      .. ..+.+.+.|..+..
T Consensus       270 ~~~~~~~V~vid~~~~~  286 (381)
T COG3391         270 ANSQGGTVSVIDGATDR  286 (381)
T ss_pred             EecCCCeEEEEeCCCCc
Confidence            85 44889999988764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.89  E-value=0.0047  Score=49.65  Aligned_cols=93  Identities=13%  Similarity=0.105  Sum_probs=60.2

Q ss_pred             CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCC-------------
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH-------------  101 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-------------  101 (291)
                      .+.+.|+|+++++...... ....+....|+| +++.++-.. ++.|.+++..++...+.-.  .+.             
T Consensus        22 ~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP-~g~~~~~v~-~~nly~~~~~~~~~~~lT~--dg~~~i~nG~~dwvye   96 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTP-PPPKLQDAKWSP-DGKYIAFVR-DNNLYLRDLATGQETQLTT--DGEPGIYNGVPDWVYE   96 (353)
T ss_dssp             EEEEEEEETTTTEEEESS--EETTBSEEEE-S-SSTEEEEEE-TTEEEEESSTTSEEEESES----TTTEEESB--HHHH
T ss_pred             ceeEEEEecCCCceEECcC-Cccccccceeec-CCCeeEEEe-cCceEEEECCCCCeEEecc--ccceeEEcCccceecc
Confidence            4789999999876543333 367889999999 888888875 6789999988775443321  110             


Q ss_pred             ---CCceEEEEEccCCCEEEEEec-CCcEEEEecc
Q psy10348        102 ---RDEVLSADFDLLGTKIMSCGM-DHSLKLWDLT  132 (291)
Q Consensus       102 ---~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~  132 (291)
                         -+.-..+-|||++++|+.... +..|+.+.+.
T Consensus        97 EEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~  131 (353)
T PF00930_consen   97 EEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLP  131 (353)
T ss_dssp             HHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE
T ss_pred             ccccccccceEECCCCCEEEEEEECCcCCceEEee
Confidence               112246789999999887765 4556666554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2114|consensus

Probab=97.87  E-value=0.0065  Score=52.29  Aligned_cols=144  Identities=8%  Similarity=0.188  Sum_probs=94.7

Q ss_pred             CEEEEecCCC-----eEEEEccCCc------ceeE--EEee-----eccceeEEEEecCCCcEEEEeecCCeEEEEECC-
Q psy10348         27 PLLAVAGSRA-----VIRIFSPAFH------ACVR--HFYG-----HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK-   87 (291)
Q Consensus        27 ~~l~~~~~dg-----~i~vw~~~~~------~~~~--~~~~-----~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-   87 (291)
                      .+|++-+.|+     .++||+++.-      +++.  .+..     ...++.+++.+. +-..+|.|-.||.|..+.-+ 
T Consensus        78 ~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~-~l~~Iv~Gf~nG~V~~~~GDi  156 (933)
T KOG2114|consen   78 NFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSE-DLKTIVCGFTNGLVICYKGDI  156 (933)
T ss_pred             eEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEc-cccEEEEEecCcEEEEEcCcc
Confidence            4777766654     5999998643      2231  1222     246788999998 78899999999999988422 


Q ss_pred             ---CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         88 ---TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        88 ---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                         .|......   .....+|+.+.+..++..++.+..-..|.+|.+....+                           .
T Consensus       157 ~RDrgsr~~~~---~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p---------------------------~  206 (933)
T KOG2114|consen  157 LRDRGSRQDYS---HRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTP---------------------------S  206 (933)
T ss_pred             hhccccceeee---ccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCc---------------------------c
Confidence               12212221   35578999999998888633334456799999874331                           1


Q ss_pred             cccccccCcceeEEEEc-CCE-EEEecCCCeEEEecCCCC
Q psy10348        165 FSTRDIHRNYVDCVRWL-GDF-VLSKSCENCIICWKPGRL  202 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~-~~~-l~~~~~d~~i~iwd~~~~  202 (291)
                      ....+.|...+.|..++ +.. +++++ +..+.+||....
T Consensus       207 ~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~  245 (933)
T KOG2114|consen  207 LKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGR  245 (933)
T ss_pred             eeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCc
Confidence            22234477888999998 443 44444 578999998754

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.86  E-value=0.0029  Score=53.20  Aligned_cols=112  Identities=9%  Similarity=0.030  Sum_probs=69.5

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeecc------cee--EEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGH------AIN--ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV   98 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~------~v~--~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~   98 (291)
                      ..++.++.++.+.-.|.++|+.+..+.....      .+.  .+...  ++..++.++.+|.|.-+|.++|+.+..+.. 
T Consensus        62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~--~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~-  138 (488)
T cd00216          62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW--DPRKVFFGTFDGRLVALDAETGKQVWKFGN-  138 (488)
T ss_pred             CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc--cCCeEEEecCCCeEEEEECCCCCEeeeecC-
Confidence            3677788889999999999998877653322      010  11111  225777888899999999999999887631 


Q ss_pred             cCCCCceEEEEEcc--CCCEEEEEe---------cCCcEEEEeccCchhhhhhc
Q psy10348         99 EGHRDEVLSADFDL--LGTKIMSCG---------MDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        99 ~~~~~~i~~~~~~~--~~~~l~~~~---------~d~~i~v~d~~~~~~~~~~~  141 (291)
                      ..+...-..+.-+|  .+..++.++         .++.+..+|..+++.+..+.
T Consensus       139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~  192 (488)
T cd00216         139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFY  192 (488)
T ss_pred             CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEee
Confidence            11100000011111  124455543         36789999999998776543

The alignment model contains an 8-bladed beta-propeller.

>KOG4649|consensus

Probab=97.86  E-value=0.0056  Score=45.33  Aligned_cols=101  Identities=9%  Similarity=-0.014  Sum_probs=68.7

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeE-EEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINE-LKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      .+++.|...|.+++.+.++|.+...+... +.|.+ ....+ ++.++..|+.|++.+..|.++..++...   +-...-.
T Consensus        64 dfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~d~-~~glIycgshd~~~yalD~~~~~cVyks---kcgG~~f  138 (354)
T KOG4649|consen   64 DFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQCDF-DGGLIYCGSHDGNFYALDPKTYGCVYKS---KCGGGTF  138 (354)
T ss_pred             CEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEEcC-CCceEEEecCCCcEEEecccccceEEec---ccCCcee
Confidence            48999999999999999999888887743 33333 23455 7889999999999999999988888775   2222222


Q ss_pred             EEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348        106 LSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      .+=+..|-...|+.+...|.+.--...
T Consensus       139 ~sP~i~~g~~sly~a~t~G~vlavt~~  165 (354)
T KOG4649|consen  139 VSPVIAPGDGSLYAAITAGAVLAVTKN  165 (354)
T ss_pred             ccceecCCCceEEEEeccceEEEEccC
Confidence            233344533345555555655444433

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.85  E-value=0.011  Score=48.63  Aligned_cols=173  Identities=12%  Similarity=0.117  Sum_probs=89.0

Q ss_pred             EeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEec
Q psy10348         52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL  131 (291)
Q Consensus        52 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~  131 (291)
                      +....-....+.++| ++++++. +.||.-.|+.....+...        .+.-..++|.+.+ .+++-...+.|.++.-
T Consensus        28 lg~~~~~p~~ls~np-ngr~v~V-~g~geY~iyt~~~~r~k~--------~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn   96 (443)
T PF04053_consen   28 LGSCEIYPQSLSHNP-NGRFVLV-CGDGEYEIYTALAWRNKA--------FGSGLSFVWSSRN-RYAVLESSSTIKIYKN   96 (443)
T ss_dssp             EEE-SS--SEEEE-T-TSSEEEE-EETTEEEEEETTTTEEEE--------EEE-SEEEE-TSS-EEEEE-TTS-EEEEET
T ss_pred             CCCCCcCCeeEEECC-CCCEEEE-EcCCEEEEEEccCCcccc--------cCceeEEEEecCc-cEEEEECCCeEEEEEc
Confidence            334445678999999 8888888 557888888844333222        2334568898854 5677666888999633


Q ss_pred             cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348        132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      -+.+....+.                             ....+..+-. |.+|...+. +.|.+||..+.+.       
T Consensus        97 ~~~~~~k~i~-----------------------------~~~~~~~If~-G~LL~~~~~-~~i~~yDw~~~~~-------  138 (443)
T PF04053_consen   97 FKNEVVKSIK-----------------------------LPFSVEKIFG-GNLLGVKSS-DFICFYDWETGKL-------  138 (443)
T ss_dssp             TEE-TT----------------------------------SS-EEEEE--SSSEEEEET-TEEEEE-TTT--E-------
T ss_pred             CccccceEEc-----------------------------CCcccceEEc-CcEEEEECC-CCEEEEEhhHcce-------
Confidence            2333222221                             1112333332 777776654 4899999998844       


Q ss_pred             CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC-------CCCcceeEEEeccccccceeeeEEcc
Q psy10348        212 TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ-------DPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       212 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                           +.++....  +..  +.|++++.++|..+.+ .+.+++....       +-.+.....+..  ....|.+..|..
T Consensus       139 -----i~~i~v~~--vk~--V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E--~~~~IkSg~W~~  206 (443)
T PF04053_consen  139 -----IRRIDVSA--VKY--VIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHE--ISERIKSGCWVE  206 (443)
T ss_dssp             -----EEEESS-E---EE--EEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEE--E-S--SEEEEET
T ss_pred             -----eeEEecCC--CcE--EEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEE--ecceeEEEEEEc
Confidence                 67766443  333  4455779999999866 6788776543       111112222221  134788888876


Q ss_pred             C
Q psy10348        285 N  285 (291)
Q Consensus       285 ~  285 (291)
                      |
T Consensus       207 d  207 (443)
T PF04053_consen  207 D  207 (443)
T ss_dssp             T
T ss_pred             C
Confidence            6

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG2444|consensus

Probab=97.83  E-value=9.3e-05  Score=53.17  Aligned_cols=104  Identities=18%  Similarity=0.142  Sum_probs=67.6

Q ss_pred             CEEEEecCCCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC-Cc
Q psy10348         27 PLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR-DE  104 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~  104 (291)
                      ..++.|+.+|.|.+|+..- +.....+..-...|.++--.-+++.+..+++.||.|+.|++.-++.+...   ..|+ .+
T Consensus        71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~---g~h~~~~  147 (238)
T KOG2444|consen   71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV---GQHNFES  147 (238)
T ss_pred             ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeee---ccccCCC
Confidence            5789999999999999762 22222222223444443333335668999999999999999877777665   4666 45


Q ss_pred             eEEEEEccCCCEEEEE--ecCCcEEEEeccC
Q psy10348        105 VLSADFDLLGTKIMSC--GMDHSLKLWDLTK  133 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~--~~d~~i~v~d~~~  133 (291)
                      +..+..+..+..+..+  +.|..++.|++..
T Consensus       148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             cceeEEecCCceEEeeccccchhhhhcchhh
Confidence            5555555555566655  5666666666654

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.81  E-value=0.0034  Score=52.90  Aligned_cols=111  Identities=7%  Similarity=-0.004  Sum_probs=69.0

Q ss_pred             CCcEEEEeecCCeEEEEECCC----c-ceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhc
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKT----D-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~----~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~  141 (291)
                      ++++...  .++.|.+.|..+    + ..+..+    .-......+.++|||+++++++. +.++.|+|+.+.+....  
T Consensus       287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yI----PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~--  358 (635)
T PRK02888        287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYV----PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFD--  358 (635)
T ss_pred             CCCEEEE--CCCEEEEEECCccccCCcceEEEE----ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhh--
Confidence            5665555  357899999987    3 344444    45667789999999998887766 89999999988664211  


Q ss_pred             cccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348        142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~  201 (291)
                      ..+  .+....            ..... -...-...+|+  |+...+-..|..|..|++..
T Consensus       359 ~~~--~~~~~v------------vaeve-vGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        359 GKI--KPRDAV------------VAEPE-LGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             ccC--CccceE------------EEeec-cCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            000  000000            00000 01112345666  55666777799999999876

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.71  E-value=0.0031  Score=55.00  Aligned_cols=99  Identities=16%  Similarity=0.141  Sum_probs=69.5

Q ss_pred             EEEEecCCCeEEEEccCCc--ceeEE-E--eeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC
Q psy10348         28 LLAVAGSRAVIRIFSPAFH--ACVRH-F--YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR  102 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~--~~~~~-~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~  102 (291)
                      -.+.|-.++.+..||.+-.  +++.. .  ........|++-+. + .+||+|+.+|.|++||-- |..-++.  +++-.
T Consensus       544 ~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~-~-G~iavgs~~G~IRLyd~~-g~~AKT~--lp~lG  618 (794)
T PF08553_consen  544 QTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTE-D-GYIAVGSNKGDIRLYDRL-GKRAKTA--LPGLG  618 (794)
T ss_pred             ceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecC-C-ceEEEEeCCCcEEeeccc-chhhhhc--CCCCC
Confidence            4566777889999998743  22211 1  12234566666664 4 589999999999999943 4332222  26778


Q ss_pred             CceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348        103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus       103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      .+|.+|..+.||+++++.+ +..+.+++..
T Consensus       619 ~pI~~iDvt~DGkwilaTc-~tyLlLi~t~  647 (794)
T PF08553_consen  619 DPIIGIDVTADGKWILATC-KTYLLLIDTL  647 (794)
T ss_pred             CCeeEEEecCCCcEEEEee-cceEEEEEEe
Confidence            9999999999999888776 5778888864

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4441|consensus

Probab=97.62  E-value=0.012  Score=50.25  Aligned_cols=186  Identities=13%  Similarity=0.119  Sum_probs=100.0

Q ss_pred             CEEEEecCC------CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecCCe-----EEEEECCCcceee
Q psy10348         27 PLLAVAGSR------AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKDHT-----LRLWNIKTDICIA   93 (291)
Q Consensus        27 ~~l~~~~~d------g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-----i~vwd~~~~~~~~   93 (291)
                      .+.++||.|      ..+..||..+++-..  .+..... =.+++..  ++.+.|+|+.||.     +-.||..+.+.-.
T Consensus       334 ~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~-~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~  410 (571)
T KOG4441|consen  334 KLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRS-DFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTP  410 (571)
T ss_pred             EEEEEccccCCCcccceEEEecCCCCceeccCCccCccc-cceeEEE--CCEEEEEeccccccccccEEEecCCCCcccc
Confidence            488999888      367788887665332  1211111 1122222  6789999999875     7778877655432


Q ss_pred             eeccccCCCCceEEEEE-ccCCCEEEEEecCC------cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         94 IFGGVEGHRDEVLSADF-DLLGTKIMSCGMDH------SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~-~~~~~~l~~~~~d~------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .-    ........... .-+|...++||.++      ++..||..+.+-...-                          
T Consensus       411 va----~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~--------------------------  460 (571)
T KOG4441|consen  411 VA----PMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIA--------------------------  460 (571)
T ss_pred             cC----CCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecC--------------------------
Confidence            21    11112222221 22577777777554      4566777665522110                          


Q ss_pred             cccccCcceeEEEEcCCEEEEecCCC-----eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        167 TRDIHRNYVDCVRWLGDFVLSKSCEN-----CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                      ....-.........++.+.+.|+.|+     ++..||..+.+-          ..+.........+.+.  ..+  ++..
T Consensus       461 ~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W----------~~v~~m~~~rs~~g~~--~~~--~~ly  526 (571)
T KOG4441|consen  461 PMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQW----------TMVAPMTSPRSAVGVV--VLG--GKLY  526 (571)
T ss_pred             CcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCce----------eEcccCccccccccEE--EEC--CEEE
Confidence            00001112223444477778888776     367788766543          2233233333322222  222  7788


Q ss_pred             EEEcCCC-----cEEEEEcCCCC
Q psy10348        242 AVGNQSG-----RTYVWDLDVQD  259 (291)
Q Consensus       242 ~~~~~dg-----~i~vwd~~~~~  259 (291)
                      ++|+.||     +|..||..+.+
T Consensus       527 ~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  527 AVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             EEecccCccccceeEEcCCCCCc
Confidence            8888776     57778777664

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.62  E-value=0.024  Score=45.66  Aligned_cols=61  Identities=15%  Similarity=0.103  Sum_probs=38.9

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-e-------e---------ccceeEEEEecCCCcEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-G-------H---------GHAINELKFHPQDFNLL   72 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~-------~---------~~~v~~~~~~~~~~~~l   72 (291)
                      ...+....|||+++    .+|... ++.|.+++..+++..+.-. +       -         -+.-.++-|+| ++++|
T Consensus        42 ~~~~~~~~~sP~g~----~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSp-d~~~l  115 (353)
T PF00930_consen   42 PPKLQDAKWSPDGK----YIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSP-DSKYL  115 (353)
T ss_dssp             ETTBSEEEE-SSST----EEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-T-TSSEE
T ss_pred             ccccccceeecCCC----eeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECC-CCCEE
Confidence            46788899999984    666664 5789999987774433211 1       0         01235788999 88877


Q ss_pred             EEee
Q psy10348         73 LSVS   76 (291)
Q Consensus        73 ~s~~   76 (291)
                      |...
T Consensus       116 a~~~  119 (353)
T PF00930_consen  116 AFLR  119 (353)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.61  E-value=0.0058  Score=49.49  Aligned_cols=149  Identities=15%  Similarity=0.075  Sum_probs=81.0

Q ss_pred             ceEEEEEccCCCEEEEEecCCcEEEEeccCchhhh--hhcccccc---------CCCC----ccccccCccccCcccccc
Q psy10348        104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD--ACAESYTF---------NPAR----STRPFDTQKEHFPQFSTR  168 (291)
Q Consensus       104 ~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~  168 (291)
                      .|..+.|.++..-|++|...|.|.+|.....+.-.  ........         .+..    ..+.-..++..+......
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            58899999999999999999999999876644322  11111110         0110    011111222334444455


Q ss_pred             cccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe---cCCC---cEE
Q psy10348        169 DIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM---DYWQ---KIL  241 (291)
Q Consensus       169 ~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~---~~l  241 (291)
                      +...++|++++.+ =.+++.|..+|.+.|.|+|.........-. .   ...-......+..+.|..   ..|+   -.|
T Consensus        83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~-~---~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L  158 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIR-E---SFLSKSSSSYVTSIEFSVMTLGGDGYSSICL  158 (395)
T ss_dssp             ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGG-G-----T-SS----EEEEEEEEEE-TTSSSEEEEE
T ss_pred             eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeecccc-c---cccccccccCeeEEEEEEEecCCCcccceEE
Confidence            5668999999997 569999999999999999876432110000 0   000011223455555553   3333   578


Q ss_pred             EEEcCCCcEEEEEcC
Q psy10348        242 AVGNQSGRTYVWDLD  256 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~  256 (291)
                      ++|+..|.+.+|.+.
T Consensus       159 ~vGTn~G~v~~fkIl  173 (395)
T PF08596_consen  159 LVGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEEETTSEEEEEEEE
T ss_pred             EEEeCCCCEEEEEEe
Confidence            999999999999886

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG4441|consensus

Probab=97.60  E-value=0.03  Score=47.97  Aligned_cols=187  Identities=15%  Similarity=0.180  Sum_probs=104.4

Q ss_pred             CEEEEecCC------CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC-C-----eEEEEECCCccee
Q psy10348         27 PLLAVAGSR------AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD-H-----TLRLWNIKTDICI   92 (291)
Q Consensus        27 ~~l~~~~~d------g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g-----~i~vwd~~~~~~~   92 (291)
                      .+++.||.+      ..+..||..+++...  .+. ....-.+++..  ++.+.++|+.| |     ++..||..+++..
T Consensus       286 ~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~  362 (571)
T KOG4441|consen  286 KLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT  362 (571)
T ss_pred             eEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE--CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence            578888877      468888988764322  222 23334556666  45888899988 3     4778888877744


Q ss_pred             eeeccccCCCCceEEEEEccCCCEEEEEecCCc-----EEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS-----LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        93 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      . +..+...........  -+|...++||.||.     +-.||..+.+-...                          ..
T Consensus       363 ~-~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v--------------------------a~  413 (571)
T KOG4441|consen  363 P-VAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV--------------------------AP  413 (571)
T ss_pred             c-cCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCccccc--------------------------CC
Confidence            4 221222222222222  25778888888864     55566655442111                          00


Q ss_pred             ccccCcceeEEEEcCCEEEEecCCC------eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSCEN------CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                      ..........+.+.|.+.++|+.++      .+..||..+..-          +.+..+........  ....+  +.+.
T Consensus       414 m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W----------~~~~~M~~~R~~~g--~a~~~--~~iY  479 (571)
T KOG4441|consen  414 MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTW----------TLIAPMNTRRSGFG--VAVLN--GKIY  479 (571)
T ss_pred             CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCce----------eecCCcccccccce--EEEEC--CEEE
Confidence            0112223344555577888888654      567788766543          11222222222111  22333  8888


Q ss_pred             EEEcCCCc-----EEEEEcCCCC
Q psy10348        242 AVGNQSGR-----TYVWDLDVQD  259 (291)
Q Consensus       242 ~~~~~dg~-----i~vwd~~~~~  259 (291)
                      ++|+.|+.     |..||..+.+
T Consensus       480 vvGG~~~~~~~~~VE~ydp~~~~  502 (571)
T KOG4441|consen  480 VVGGFDGTSALSSVERYDPETNQ  502 (571)
T ss_pred             EECCccCCCccceEEEEcCCCCc
Confidence            88987763     7778887764

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.58  E-value=0.025  Score=44.99  Aligned_cols=95  Identities=18%  Similarity=0.072  Sum_probs=47.6

Q ss_pred             EeeeccCCCCCEEEEecCC--CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeee
Q psy10348         17 AWSMDLESGRPLLAVAGSR--AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        17 ~~s~~~~~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                      +|.++++   ++|+++..|  ..+.+.|+++++..+.-.+.........++| +.+.++-...+..|+--|+++.+....
T Consensus        42 ~ft~dG~---kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~-~~~~~~Yv~~~~~l~~vdL~T~e~~~v  117 (386)
T PF14583_consen   42 CFTDDGR---KLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSP-DDRALYYVKNGRSLRRVDLDTLEERVV  117 (386)
T ss_dssp             -B-TTS----EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-T-TSSEEEEEETTTEEEEEETTT--EEEE
T ss_pred             CcCCCCC---EEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEec-CCCeEEEEECCCeEEEEECCcCcEEEE
Confidence            4566664   566655545  4677778888876654443323344567778 556655444556888889998876555


Q ss_pred             eccccCCCCceEEEEEc--cCCCEEE
Q psy10348         95 FGGVEGHRDEVLSADFD--LLGTKIM  118 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~--~~~~~l~  118 (291)
                      +   ......+-...|.  .++..++
T Consensus       118 y---~~p~~~~g~gt~v~n~d~t~~~  140 (386)
T PF14583_consen  118 Y---EVPDDWKGYGTWVANSDCTKLV  140 (386)
T ss_dssp             E---E--TTEEEEEEEEE-TTSSEEE
T ss_pred             E---ECCcccccccceeeCCCccEEE
Confidence            5   3445555445554  3444443

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.57  E-value=0.031  Score=45.85  Aligned_cols=51  Identities=6%  Similarity=0.162  Sum_probs=37.6

Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      .|.+|+.. |+.+..+.   -..+.|.++.|+.+. .|+....||.+++||+....
T Consensus        62 ~I~iys~s-G~ll~~i~---w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~  112 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIP---WDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEF  112 (410)
T ss_pred             EEEEECCC-CCEeEEEE---ECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCCce
Confidence            48899866 66776652   223899999998755 56666789999999986433

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.56  E-value=0.0097  Score=48.76  Aligned_cols=85  Identities=19%  Similarity=0.157  Sum_probs=53.4

Q ss_pred             cceeEEEeeeccceeEEEEecCCCcEEEEe---ecC-CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-
Q psy10348         46 HACVRHFYGHGHAINELKFHPQDFNLLLSV---SKD-HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-  120 (291)
Q Consensus        46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~---~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-  120 (291)
                      +...+.+..-...+..-+|+| ++..++-.   ... ..+.++|+++++....+    ...+.-..-+|+|+|++|+.+ 
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~----~~~g~~~~P~fspDG~~l~f~~  256 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVIL----NFNGNNGAPAFSPDGSKLAFSS  256 (425)
T ss_pred             CcceeEecccCcceeccccCc-CCCceEEEEEecCCCceEEEEeccCCccceee----ccCCccCCccCCCCCCEEEEEE
Confidence            444444444445666778888 66554433   222 45999999988776665    234444556799999977655 


Q ss_pred             ecCCc--EEEEeccCch
Q psy10348        121 GMDHS--LKLWDLTKPE  135 (291)
Q Consensus       121 ~~d~~--i~v~d~~~~~  135 (291)
                      ..||.  |.++|+....
T Consensus       257 ~rdg~~~iy~~dl~~~~  273 (425)
T COG0823         257 SRDGSPDIYLMDLDGKN  273 (425)
T ss_pred             CCCCCccEEEEcCCCCc
Confidence            44665  5666776666

>KOG2079|consensus

Probab=97.55  E-value=0.00043  Score=60.58  Aligned_cols=102  Identities=13%  Similarity=0.201  Sum_probs=73.3

Q ss_pred             EEEEecCCCeEEEEccCCc-ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         28 LLAVAGSRAVIRIFSPAFH-ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      .++.|+..|.+-..|.... .+...-..-.++|++++|+. +|..++.|-.+|.|.+||...++..+.+.........|.
T Consensus       101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi  179 (1206)
T KOG2079|consen  101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVI  179 (1206)
T ss_pred             eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeeeecCCccceEE
Confidence            6888888888888887643 11111122357999999999 999999999999999999999888888732222223344


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEecc
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      .+.+..++..++++...|.  +|.+.
T Consensus       180 ~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  180 FVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             EEEEeCCCcEEEEccCCCc--eEEEE
Confidence            4555666668888887776  66654

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.54  E-value=0.022  Score=43.20  Aligned_cols=169  Identities=9%  Similarity=0.140  Sum_probs=108.8

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee-ccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH-GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ..+.++.|+|+.+    .|++......-.|+=..+|+.++++.-. -.....+.+.. ++.+.++--.++.+.++.+..+
T Consensus        86 ~nvS~LTynp~~r----tLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig-~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          86 ANVSSLTYNPDTR----TLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIG-GNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             ccccceeeCCCcc----eEEEecCCCceEEEEecCCceEEEecccccCChhHeEEec-CCEEEEEehhcceEEEEEEcCC
Confidence            4489999999985    6666666666666666679988887521 22346678887 7777777777888888877655


Q ss_pred             ceeee-------eccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         90 ICIAI-------FGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        90 ~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      ..+..       +......+.....++|.|..+.|+.+=+..-+.||........  +..+....|...           
T Consensus       161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~--l~~~~~~~~~~~-----------  227 (316)
T COG3204         161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSS--LSVHASLDPTAD-----------  227 (316)
T ss_pred             ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcc--cccccccCcccc-----------
Confidence            33222       2222223667889999999999999988888888887633211  110010001000           


Q ss_pred             cccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCC
Q psy10348        163 PQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~  202 (291)
                           .+-.-..|+++.|+   +.+++-+.+++.+.-.|....
T Consensus       228 -----~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~  265 (316)
T COG3204         228 -----RDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE  265 (316)
T ss_pred             -----cceEeeccccceecCCCCcEEEEecCCceEEEEecCCC
Confidence                 00123346777887   567777888888888876544

>PHA03098 kelch-like protein; Provisional

Probab=97.53  E-value=0.031  Score=47.84  Aligned_cols=103  Identities=6%  Similarity=0.025  Sum_probs=50.4

Q ss_pred             CEEEEecCCC------eEEEEccCCcceeEEEee-e-ccceeEEEEecCCCcEEEEeecC-----CeEEEEECCCcceee
Q psy10348         27 PLLAVAGSRA------VIRIFSPAFHACVRHFYG-H-GHAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDICIA   93 (291)
Q Consensus        27 ~~l~~~~~dg------~i~vw~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~   93 (291)
                      .+++.||.++      .+..||..+++... +.. . ...-.+++..  ++.+++.|+.+     ..+..||..+++...
T Consensus       296 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~  372 (534)
T PHA03098        296 VIYFIGGMNKNNLSVNSVVSYDTKTKSWNK-VPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWRE  372 (534)
T ss_pred             EEEEECCCcCCCCeeccEEEEeCCCCeeeE-CCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence            4666676542      56778877655422 111 0 1111122222  55777777765     347788887665432


Q ss_pred             eeccccCCCCceEEEEEccCCCEEEEEecC------CcEEEEeccCch
Q psy10348         94 IFGGVEGHRDEVLSADFDLLGTKIMSCGMD------HSLKLWDLTKPE  135 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~  135 (291)
                      . ..+....... +++ .-++...+.||.+      ..+..||+.+.+
T Consensus       373 ~-~~lp~~r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~  417 (534)
T PHA03098        373 E-PPLIFPRYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNK  417 (534)
T ss_pred             C-CCcCcCCccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCe
Confidence            2 1111111111 122 2246666666632      347778876644

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.52  E-value=0.015  Score=43.82  Aligned_cols=196  Identities=17%  Similarity=0.174  Sum_probs=104.4

Q ss_pred             EeeeccCCCCCEEEEecCC-----CeEEEEccCCc-ceeEEEeeeccceeEEEEecCCCcEEEEeec-------------
Q psy10348         17 AWSMDLESGRPLLAVAGSR-----AVIRIFSPAFH-ACVRHFYGHGHAINELKFHPQDFNLLLSVSK-------------   77 (291)
Q Consensus        17 ~~s~~~~~~~~~l~~~~~d-----g~i~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------------   77 (291)
                      .||||+    .+|.+.-.|     |.|-|||...+ +.+-.+..|.-.-..+.|.+ ||+.++.+..             
T Consensus       120 vfs~dG----~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~-DGrtlvvanGGIethpdfgR~~l  194 (366)
T COG3490         120 VFSPDG----RLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMA-DGRTLVVANGGIETHPDFGRTEL  194 (366)
T ss_pred             ccCCCC----cEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEec-CCcEEEEeCCceecccccCcccc
Confidence            578888    477766443     88999998743 34556667776677889999 8888887642             


Q ss_pred             -----CCeEEEEECCCcceeeeecccc--CCCCceEEEEEccCCCEEEEEecCCc-----EEEEeccCchhhhhhccccc
Q psy10348         78 -----DHTLRLWNIKTDICIAIFGGVE--GHRDEVLSADFDLLGTKIMSCGMDHS-----LKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        78 -----dg~i~vwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~~~~~  145 (291)
                           .-++.+.|..+|+.+.+. .+.  .+...|..++..++|..++.+-..|.     ..+=-...++.+..+     
T Consensus       195 NldsMePSlvlld~atG~liekh-~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~-----  268 (366)
T COG3490         195 NLDSMEPSLVLLDAATGNLIEKH-TLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFL-----  268 (366)
T ss_pred             chhhcCccEEEEeccccchhhhc-cCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCccc-----
Confidence                 112333343444443321 112  23455777777777765544322221     000000111111000     


Q ss_pred             cCCCCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF  222 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  222 (291)
                                ..-      -........+|-+++.+  .. ..++.-..+...+||..++..            +..-..
T Consensus       269 ----------~~p------ee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~v------------v~~a~l  320 (366)
T COG3490         269 ----------DLP------EEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAV------------VSEAAL  320 (366)
T ss_pred             ----------CCC------HHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcE------------Eecccc
Confidence                      000      00111234567778877  33 445555677888999999854            222211


Q ss_pred             CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        223 KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       223 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ..    +.-+...  ..-+++.+.+|.+.++.-..
T Consensus       321 ~d----aaGva~~--~~gf~vssg~G~~~~~s~~~  349 (366)
T COG3490         321 PD----AAGVAAA--KGGFAVSSGQGRIIFYSRAA  349 (366)
T ss_pred             cc----cccceec--cCceEEecCCceEEeccccc
Confidence            11    1122332  55566677788998885433

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.47  E-value=0.041  Score=44.78  Aligned_cols=228  Identities=9%  Similarity=0.040  Sum_probs=128.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      ....+...+++.   +..++-.....+...+............-...-..++.++...+..+....+..|.+.|..+.+.
T Consensus        32 ~~~~v~~~~~g~---~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~  108 (381)
T COG3391          32 GPGGVAVNPDGT---QVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTV  108 (381)
T ss_pred             CCceeEEcCccC---EEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccce
Confidence            344556666663   33444333335555555422222211111123356777873444566666678999999887777


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ....    .-......++++++++.++.+..   ++.+.+.|-.+.+.......                          
T Consensus       109 ~~~~----~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v--------------------------  158 (381)
T COG3391         109 LGSI----PVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV--------------------------  158 (381)
T ss_pred             eeEe----eeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec--------------------------
Confidence            6665    22236678999999988777665   68888888888776654221                          


Q ss_pred             cccCcceeEEEEc--CCEEE-EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        169 DIHRNYVDCVRWL--GDFVL-SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                        -..+ ..++++  |+.++ +-..++.|.+.|........  .     ...........+   ....++|++.++.+..
T Consensus       159 --G~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~--~-----~~~~~~~~~~~P---~~i~v~~~g~~~yV~~  225 (381)
T COG3391         159 --GNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR--G-----SVGSLVGVGTGP---AGIAVDPDGNRVYVAN  225 (381)
T ss_pred             --CCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec--c-----ccccccccCCCC---ceEEECCCCCEEEEEe
Confidence              1122 566666  66444 44578999999976653310  0     000001111111   1244567788776655


Q ss_pred             CC---CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        246 QS---GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       246 ~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..   +.+...|..++...    ......+-. ....++.+|+|+++.
T Consensus       226 ~~~~~~~v~~id~~~~~v~----~~~~~~~~~-~~~~v~~~p~g~~~y  268 (381)
T COG3391         226 DGSGSNNVLKIDTATGNVT----ATDLPVGSG-APRGVAVDPAGKAAY  268 (381)
T ss_pred             ccCCCceEEEEeCCCceEE----EeccccccC-CCCceeECCCCCEEE
Confidence            43   58999998887421    110111111 456688999988763

>KOG2444|consensus

Probab=97.46  E-value=0.00049  Score=49.61  Aligned_cols=141  Identities=8%  Similarity=-0.036  Sum_probs=75.8

Q ss_pred             EEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348         72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS  151 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~  151 (291)
                      +..-+.||.|+-++++..+....-.  ..+...-.-+   .-+..++.|+.+|.|.+|.............         
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse--~~~~e~~~v~---~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~---------   98 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSE--RFIDEGQRVV---TASAKLMVGTSDGAVYVFNWNLEGAHSDRVC---------   98 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhh--hhhhcceeec---ccCceEEeecccceEEEecCCccchHHHhhh---------
Confidence            3334667888777766433221110  1122221111   2356799999999999998873322211110         


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-ccE
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEI  227 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i  227 (291)
                                        .-...|.+....   +.+..+++.||.|+.|++.-.+.            +.....|. .+.
T Consensus        99 ------------------s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~------------~g~~g~h~~~~~  148 (238)
T KOG2444|consen   99 ------------------SGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKV------------LGYVGQHNFESG  148 (238)
T ss_pred             ------------------cccccceeccccccccceeEEeccCCceeeeccccCce------------eeeeccccCCCc
Confidence                              012223333333   44889999999999999876543            33333333 222


Q ss_pred             EEEEEEecCCCcEEEEE--cCCCcEEEEEcCCC
Q psy10348        228 WFIRFSMDYWQKILAVG--NQSGRTYVWDLDVQ  258 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~  258 (291)
                      ......-+  +++++.+  |.|..++.|++...
T Consensus       149 e~~ivv~s--d~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  149 EELIVVGS--DEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             ceeEEecC--CceEEeeccccchhhhhcchhhh
Confidence            22222222  6666666  67777777777654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.46  E-value=0.00055  Score=36.50  Aligned_cols=34  Identities=9%  Similarity=0.209  Sum_probs=29.5

Q ss_pred             ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      ...|.+++|+| ..++||.|..+|.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCP-TMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECC-CCCEEEEEECCCeEEEEEC-CCcC
Confidence            35699999999 8999999999999999998 4543

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.44  E-value=0.052  Score=45.25  Aligned_cols=123  Identities=11%  Similarity=0.085  Sum_probs=77.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC-----CcceeEEEee-ecc--c--eeEEEEecCCCcEEEEeec
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-----FHACVRHFYG-HGH--A--INELKFHPQDFNLLLSVSK   77 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~-----~~~~~~~~~~-~~~--~--v~~~~~~~~~~~~l~s~~~   77 (291)
                      ..-+.|..++|+|-...+.+.|++......|.||.+.     +++.+..-.. ...  +  -..+.|+| ....|+.-..
T Consensus        54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHP-k~~iL~VLT~  132 (671)
T PF15390_consen   54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHP-KKAILTVLTA  132 (671)
T ss_pred             eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccC-CCceEEEEec
Confidence            3457899999999987776555555666899999875     2333222111 111  1  23578999 7677777655


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC-CcEEEEeccC
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-HSLKLWDLTK  133 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~v~d~~~  133 (291)
                      ...-.++++..........  -...+.|.|.+|.+||+.|+.+-.. =.-++||-..
T Consensus       133 ~dvSV~~sV~~d~srVkaD--i~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  133 RDVSVLPSVHCDSSRVKAD--IKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             CceeEeeeeeeCCceEEEe--ccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            5544566665432222111  2566889999999999988776533 3457787543

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.43  E-value=0.05  Score=44.92  Aligned_cols=111  Identities=14%  Similarity=0.078  Sum_probs=65.7

Q ss_pred             EEEeeeccCCCCCEEEEe-cCC----CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcE-EEEeecC----------
Q psy10348         15 TCAWSMDLESGRPLLAVA-GSR----AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL-LLSVSKD----------   78 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~-~~d----g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~d----------   78 (291)
                      ..++||+++    ++|.+ +..    ..++++|+++|+.+...-... .-..+.|.+ +++. +.+...+          
T Consensus       128 ~~~~Spdg~----~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~-d~~~~~y~~~~~~~~~~~~~~~  201 (414)
T PF02897_consen  128 GFSVSPDGK----RLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSD-DGKGFFYTRFDEDQRTSDSGYP  201 (414)
T ss_dssp             EEEETTTSS----EEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECT-TSSEEEEEECSTTTSS-CCGCC
T ss_pred             eeeECCCCC----EEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeC-CCCEEEEEEeCcccccccCCCC
Confidence            567788884    77655 232    469999999997765321111 122399999 6554 4444222          


Q ss_pred             CeEEEEECCCccee--eeeccccCCC-Cc-eEEEEEccCCCEEEEEec---C-CcEEEEeccCc
Q psy10348         79 HTLRLWNIKTDICI--AIFGGVEGHR-DE-VLSADFDLLGTKIMSCGM---D-HSLKLWDLTKP  134 (291)
Q Consensus        79 g~i~vwd~~~~~~~--~~~~~~~~~~-~~-i~~~~~~~~~~~l~~~~~---d-~~i~v~d~~~~  134 (291)
                      ..|+.|.+.++..-  ..+   .... .. ...+..++++++|+....   + ..+.+.|+..+
T Consensus       202 ~~v~~~~~gt~~~~d~lvf---e~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~  262 (414)
T PF02897_consen  202 RQVYRHKLGTPQSEDELVF---EEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG  262 (414)
T ss_dssp             EEEEEEETTS-GGG-EEEE---C-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred             cEEEEEECCCChHhCeeEE---eecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence            23788888766432  344   2222 22 678889999998775443   2 34677777664

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PHA02790 Kelch-like protein; Provisional

Probab=97.43  E-value=0.03  Score=47.07  Aligned_cols=103  Identities=6%  Similarity=-0.045  Sum_probs=51.5

Q ss_pred             CEEEEecCCC-----eEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC--CeEEEEECCCcceeeeecc
Q psy10348         27 PLLAVAGSRA-----VIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD--HTLRLWNIKTDICIAIFGG   97 (291)
Q Consensus        27 ~~l~~~~~dg-----~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~   97 (291)
                      .++++||.++     .+..||..+++-..  .+...... .+++ .- ++.+.+.|+.+  ..+..||..+++... +..
T Consensus       273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~-~~~v-~~-~~~iYviGG~~~~~sve~ydp~~n~W~~-~~~  348 (480)
T PHA02790        273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLY-ASGV-PA-NNKLYVVGGLPNPTSVERWFHGDAAWVN-MPS  348 (480)
T ss_pred             EEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhc-ceEE-EE-CCEEEEECCcCCCCceEEEECCCCeEEE-CCC
Confidence            4677777543     56678877654322  12111111 1222 23 66777888764  357888877654332 211


Q ss_pred             ccCCCCceEEEEEccCCCEEEEEecCC---cEEEEeccCch
Q psy10348         98 VEGHRDEVLSADFDLLGTKIMSCGMDH---SLKLWDLTKPE  135 (291)
Q Consensus        98 ~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~  135 (291)
                      +.........+.  -+|+..+.||.++   .+..||.++.+
T Consensus       349 l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~  387 (480)
T PHA02790        349 LLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQ  387 (480)
T ss_pred             CCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCE
Confidence            121111222222  2566667777553   35567765543

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.43  E-value=0.00075  Score=35.98  Aligned_cols=35  Identities=11%  Similarity=-0.023  Sum_probs=30.5

Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      .....|.+++|+|...+||.++.+|.|.++.+ +++
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            34567999999999999999999999999998 444

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.43  E-value=0.045  Score=48.37  Aligned_cols=111  Identities=13%  Similarity=0.073  Sum_probs=73.7

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeecc--------ceeEEEEec---------------CCCcEEEEeecCCeEEE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGH--------AINELKFHP---------------QDFNLLLSVSKDHTLRL   83 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--------~v~~~~~~~---------------~~~~~l~s~~~dg~i~v   83 (291)
                      ..|+.++.++.|.-.|.++|+.+.++.....        ....+.+..               .....++.++.|+.+.-
T Consensus       195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiA  274 (764)
T TIGR03074       195 DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIA  274 (764)
T ss_pred             CEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEE
Confidence            4788888889999999999998887753221        122233321               02347888889999999


Q ss_pred             EECCCcceeeeeccccCCCCceE-------------EEEEcc--CCCEEEEEec----------CCcEEEEeccCchhhh
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVL-------------SADFDL--LGTKIMSCGM----------DHSLKLWDLTKPEIKD  138 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~-------------~~~~~~--~~~~l~~~~~----------d~~i~v~d~~~~~~~~  138 (291)
                      .|.++|+.+..+.    .++.|.             ...-.|  .+..++.|+.          +|.|+-+|.++++.+.
T Consensus       275 LDA~TGk~~W~fg----~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W  350 (764)
T TIGR03074       275 LDADTGKLCEDFG----NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW  350 (764)
T ss_pred             EECCCCCEEEEec----CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence            9999999987762    222210             111112  1345666642          6889999999999887


Q ss_pred             hhc
Q psy10348        139 ACA  141 (291)
Q Consensus       139 ~~~  141 (291)
                      .+.
T Consensus       351 ~~~  353 (764)
T TIGR03074       351 AWD  353 (764)
T ss_pred             EEe
Confidence            665

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG2395|consensus

Probab=97.40  E-value=0.012  Score=48.13  Aligned_cols=147  Identities=15%  Similarity=0.072  Sum_probs=91.5

Q ss_pred             CCcEEE-EeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCC-------EEEEEecCCcEEEEeccCchhh-h
Q psy10348         68 DFNLLL-SVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-------KIMSCGMDHSLKLWDLTKPEIK-D  138 (291)
Q Consensus        68 ~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~d~~i~v~d~~~~~~~-~  138 (291)
                      +.++|+ ++.....++-.|++.|+.+...   .-+.. |.-+.+.|+.+       .-+.|-.|..|.-||.+-.... -
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEW---k~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl  419 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEW---KFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKL  419 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEe---eccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCccee
Confidence            444444 4555566888899999999887   44444 77788888643       2234555888999998843321 0


Q ss_pred             hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeee
Q psy10348        139 ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      .......+.                       ......|.+-. ..++++|+.+|.|++||- .+..           .-
T Consensus       420 ~~~q~kqy~-----------------------~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~-----------AK  464 (644)
T KOG2395|consen  420 AVVQSKQYS-----------------------TKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRR-----------AK  464 (644)
T ss_pred             eeeeccccc-----------------------cccccceeeecCCceEEEeecCCcEEeehh-hhhh-----------hh
Confidence            000000010                       11122333333 569999999999999996 3322           13


Q ss_pred             eeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        218 NRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      ..+.+-..+|..+..+.+  |++|+..+. ..+.+.++.
T Consensus       465 TAlPgLG~~I~hVdvtad--GKwil~Tc~-tyLlLi~t~  500 (644)
T KOG2395|consen  465 TALPGLGDAIKHVDVTAD--GKWILATCK-TYLLLIDTL  500 (644)
T ss_pred             hcccccCCceeeEEeecc--CcEEEEecc-cEEEEEEEe
Confidence            445666778888888766  999887764 466676654

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.39  E-value=0.041  Score=43.02  Aligned_cols=183  Identities=8%  Similarity=-0.024  Sum_probs=107.6

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcceeeeeccccCCCC--
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDICIAIFGGVEGHRD--  103 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~--  103 (291)
                      +.++|+|.++++.+-.+..  +-.-.+..+| +++.++++.          ..-.|.+||..+-.....+.....|..  
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~sp-dgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~   93 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSP-DGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQV   93 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-T-TSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--B
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECC-CCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhee
Confidence            5899999999998887763  3334466789 888888753          234599999998877665432122121  


Q ss_pred             --ceEEEEEccCCCEEEEE--ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        104 --EVLSADFDLLGTKIMSC--GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       104 --~i~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                        ....++++.++++++..  +---+|.|.|+...+.+.++..                              ..+..+-
T Consensus        94 ~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~------------------------------PGC~~iy  143 (342)
T PF06433_consen   94 VPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT------------------------------PGCWLIY  143 (342)
T ss_dssp             S--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG------------------------------TSEEEEE
T ss_pred             cccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC------------------------------CCEEEEE
Confidence              22346788899877765  3466799999998887655431                              1122222


Q ss_pred             Ec-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        180 WL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       180 ~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      -. ++-+.+-+.||.+.-..+........       +.-..|.....++... -.....+..++--+.+|.|+--|+...
T Consensus       144 P~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~-------~~t~~F~~~~dp~f~~-~~~~~~~~~~~F~Sy~G~v~~~dlsg~  215 (342)
T PF06433_consen  144 PSGNRGFSMLCGDGSLLTVTLDADGKEAQ-------KSTKVFDPDDDPLFEH-PAYSRDGGRLYFVSYEGNVYSADLSGD  215 (342)
T ss_dssp             EEETTEEEEEETTSCEEEEEETSTSSEEE-------EEEEESSTTTS-B-S---EEETTTTEEEEEBTTSEEEEEEETTS
T ss_pred             ecCCCceEEEecCCceEEEEECCCCCEeE-------eeccccCCCCcccccc-cceECCCCeEEEEecCCEEEEEeccCC
Confidence            22 45677888899998888874433211       1112233333322211 111223444544677888888888766


Q ss_pred             C
Q psy10348        259 D  259 (291)
Q Consensus       259 ~  259 (291)
                      .
T Consensus       216 ~  216 (342)
T PF06433_consen  216 S  216 (342)
T ss_dssp             S
T ss_pred             c
Confidence            4

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.22  E-value=0.061  Score=41.56  Aligned_cols=160  Identities=16%  Similarity=0.151  Sum_probs=87.1

Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      .++.|+.|..+| +.+++.........+    .+...|..+...|+-+.|++-+ |+.++++++........... . ..
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i----~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~-~-~~   77 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRI----LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAP-L-AF   77 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeE----eecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccc-c-cc
Confidence            567899999988 899998333333332    2334499999999877766665 59999999987664432110 0 00


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEE----EcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR----WLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                      +....            ..........+...+    ..+...+......+|.+|..........       ...+++...
T Consensus        78 ~~~~~------------~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~-------~~~ke~~lp  138 (275)
T PF00780_consen   78 PKSRS------------LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFS-------KLLKEISLP  138 (275)
T ss_pred             ccccc------------ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCccccc-------ceeEEEEcC
Confidence            00000            000000111222333    1133344444456888888765321100       124444444


Q ss_pred             cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      . .+..+.+.    +..++.|..++ ..+.|+.++..
T Consensus       139 ~-~~~~i~~~----~~~i~v~~~~~-f~~idl~~~~~  169 (275)
T PF00780_consen  139 D-PPSSIAFL----GNKICVGTSKG-FYLIDLNTGSP  169 (275)
T ss_pred             C-CcEEEEEe----CCEEEEEeCCc-eEEEecCCCCc
Confidence            3 34444444    67888887554 88899987643

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2395|consensus

Probab=97.15  E-value=0.044  Score=44.99  Aligned_cols=115  Identities=13%  Similarity=0.074  Sum_probs=75.1

Q ss_pred             eEEEEeeeccCCC---CCEEEEecCCCeEEEEccCCc-c-eeEEEeeec----cceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348         13 FYTCAWSMDLESG---RPLLAVAGSRAVIRIFSPAFH-A-CVRHFYGHG----HAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus        13 i~~~~~s~~~~~~---~~~l~~~~~dg~i~vw~~~~~-~-~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      |+-+.+.|+..-.   ...-+.|-.++.|.-||++-. . .+...++|.    ....|.+-.  ...++++|+.+|.|++
T Consensus       378 i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT--~sG~IvvgS~~GdIRL  455 (644)
T KOG2395|consen  378 INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT--ESGYIVVGSLKGDIRL  455 (644)
T ss_pred             cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeec--CCceEEEeecCCcEEe
Confidence            6666666664211   112344667888999997632 2 333334442    234444444  4468999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                      ||- .+...++.  +++-..+|..+..+.+|++++..+ +..+.+.++.-
T Consensus       456 Ydr-i~~~AKTA--lPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~~  501 (644)
T KOG2395|consen  456 YDR-IGRRAKTA--LPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTLI  501 (644)
T ss_pred             ehh-hhhhhhhc--ccccCCceeeEEeeccCcEEEEec-ccEEEEEEEec
Confidence            997 44433332  278899999999999999877666 67788877643

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.13  E-value=0.069  Score=43.91  Aligned_cols=116  Identities=19%  Similarity=0.119  Sum_probs=69.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEe---cCC-CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcE-EEEeecCCe--EE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVA---GSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL-LLSVSKDHT--LR   82 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~---~~d-g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~dg~--i~   82 (291)
                      ...+..-+|+|++.    .++..   ... ..+.++++++++....+. ..+.-..-+|+| +++. +++...||.  |.
T Consensus       192 ~~~~~~p~ws~~~~----~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fsp-DG~~l~f~~~rdg~~~iy  265 (425)
T COG0823         192 GSLILTPAWSPDGK----KLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSP-DGSKLAFSSSRDGSPDIY  265 (425)
T ss_pred             CcceeccccCcCCC----ceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCC-CCCEEEEEECCCCCccEE
Confidence            34555667888874    33332   222 469999999887655554 334445678999 5555 455566666  56


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCc--EEEEeccCch
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHS--LKLWDLTKPE  135 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~--i~v~d~~~~~  135 (291)
                      +.|+..++..+ +   ..-.+.-..=.|+|+|++++..+. .|.  |.+++++...
T Consensus       266 ~~dl~~~~~~~-L---t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~  317 (425)
T COG0823         266 LMDLDGKNLPR-L---TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ  317 (425)
T ss_pred             EEcCCCCccee-c---ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc
Confidence            66777666333 4   222222336679999998876654 555  4445555444

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.12  E-value=0.075  Score=45.72  Aligned_cols=109  Identities=12%  Similarity=0.048  Sum_probs=59.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEec------CCC--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-CeE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAG------SRA--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-HTL   81 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~------~dg--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i   81 (291)
                      ..+.+.+.+|++.    .+|..-      .|+  .|.+++.. +.. +.+.. ....+.-.|+| ++..+++.... ..+
T Consensus       350 ~~vsspaiSpdG~----~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~-g~~~t~PsWsp-DG~~lw~v~dg~~~~  421 (591)
T PRK13616        350 GNITSAALSRSGR----QVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE-GHSLTRPSWSL-DADAVWVVVDGNTVV  421 (591)
T ss_pred             cCcccceECCCCC----EEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec-CCCCCCceECC-CCCceEEEecCcceE
Confidence            3566778888885    554443      244  45554542 333 33321 23478889999 87777776432 122


Q ss_pred             EEEECCCcceeeeec----cc-cCCCCceEEEEEccCCCEEEEEecCCcEEE
Q psy10348         82 RLWNIKTDICIAIFG----GV-EGHRDEVLSADFDLLGTKIMSCGMDHSLKL  128 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~----~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v  128 (291)
                      ++.+-.....+..+.    .. ......|..+.|+|||..++... ++.|.+
T Consensus       422 ~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        422 RVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             EEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence            232221111111110    00 02245799999999999887766 466766

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.10  E-value=0.074  Score=40.14  Aligned_cols=115  Identities=13%  Similarity=-0.017  Sum_probs=73.8

Q ss_pred             EEEEeeeccCCCCCEEEEecCCC--eEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRA--VIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      -.+.|..++    .++-+.+.-|  .|+.+|+++++.+....-.. ---..++... + ++..-.-.++...+||..+-+
T Consensus        48 QGL~~~~~g----~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d-~l~qLTWk~~~~f~yd~~tl~  121 (264)
T PF05096_consen   48 QGLEFLDDG----TLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-D-KLYQLTWKEGTGFVYDPNTLK  121 (264)
T ss_dssp             EEEEEEETT----EEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-T-EEEEEESSSSEEEEEETTTTE
T ss_pred             ccEEecCCC----EEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-C-EEEEEEecCCeEEEEccccce
Confidence            356665555    3666666554  79999999998776654221 1223455554 3 455555778999999999988


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhh
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~  140 (291)
                      .+..+.    ....=..++  .+++.|+.+.....++++|..+.+....+
T Consensus       122 ~~~~~~----y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i  165 (264)
T PF05096_consen  122 KIGTFP----YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTI  165 (264)
T ss_dssp             EEEEEE-----SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEE
T ss_pred             EEEEEe----cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEE
Confidence            888872    334556666  46777887777888999998887765544

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PHA02713 hypothetical protein; Provisional

Probab=97.09  E-value=0.015  Score=49.67  Aligned_cols=29  Identities=7%  Similarity=0.008  Sum_probs=20.5

Q ss_pred             eeEEEEcCCEEEEecCCC--eEEEecCCCCC
Q psy10348        175 VDCVRWLGDFVLSKSCEN--CIICWKPGRLE  203 (291)
Q Consensus       175 v~~~~~~~~~l~~~~~d~--~i~iwd~~~~~  203 (291)
                      ...+...+.+.++|+.|+  .+..||..+.+
T Consensus       506 ~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        506 LHTILHDNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             ceeEEECCEEEEEeeecceeehhhcCccccc
Confidence            444555578888898888  67777776654

>KOG2079|consensus

Probab=97.03  E-value=0.0024  Score=56.22  Aligned_cols=71  Identities=14%  Similarity=0.219  Sum_probs=55.1

Q ss_pred             CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      +..++.|+..|.+...|+...  +..+..-..-.++|++++|+.+|..++.|-.+|.|.+||+..++..+.+.
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~n--L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~  169 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGN--LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT  169 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcc--cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence            357888888899998887643  11121113456799999999999999999999999999999988776554

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.87  E-value=0.19  Score=41.07  Aligned_cols=55  Identities=13%  Similarity=0.065  Sum_probs=41.3

Q ss_pred             ceeEEEEeeeccC-------CCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEec
Q psy10348         11 ENFYTCAWSMDLE-------SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP   66 (291)
Q Consensus        11 ~~i~~~~~s~~~~-------~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~   66 (291)
                      +.|+++.|-|-..       +|...+++|..+|.|++|.. +|.++..-.-|.++|..+.+..
T Consensus        57 e~ITsi~clpl~s~~~s~~~~dw~~I~VG~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~  118 (415)
T PF14655_consen   57 ECITSILCLPLSSQKRSTGGPDWTCIAVGTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS  118 (415)
T ss_pred             CEEEEEEEEEeecccccCCCCCcEEEEEEecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence            6788887766421       33469999999999999985 5776655556888898888854

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.86  E-value=0.13  Score=39.15  Aligned_cols=144  Identities=10%  Similarity=0.142  Sum_probs=95.1

Q ss_pred             CCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc
Q psy10348        102 RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL  181 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  181 (291)
                      .+-+..+.++  +++.+.+..+.-+++.|+.+......+.                         .++ -.+.-.++..+
T Consensus        86 ~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~-------------------------~ln-t~gyaygv~vs  137 (370)
T COG5276          86 RDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIG-------------------------FLN-TDGYAYGVYVS  137 (370)
T ss_pred             hhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceec-------------------------ccc-CCceEEEEEec
Confidence            4455666675  5688888888889999998766332211                         000 12445667777


Q ss_pred             CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348        182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      |++...+..|.-+.+.|+......         ....++.......+-  ...+  |++-..+..|+-+.+.|+.+....
T Consensus       138 Gn~aYVadlddgfLivdvsdpssP---------~lagrya~~~~d~~~--v~IS--Gn~AYvA~~d~GL~ivDVSnp~sP  204 (370)
T COG5276         138 GNYAYVADLDDGFLIVDVSDPSSP---------QLAGRYALPGGDTHD--VAIS--GNYAYVAWRDGGLTIVDVSNPHSP  204 (370)
T ss_pred             CCEEEEeeccCcEEEEECCCCCCc---------eeeeeeccCCCCcee--EEEe--cCeEEEEEeCCCeEEEEccCCCCC
Confidence            999999997877888999877654         333444444433333  3444  999999999999999999987642


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+........+.++..+++--+++
T Consensus       205 ----vli~~~n~g~g~~sv~vsdnr~y~v  229 (370)
T COG5276         205 ----VLIGSYNTGPGTYSVSVSDNRAYLV  229 (370)
T ss_pred             ----eEEEEEecCCceEEEEecCCeeEEE
Confidence                2333323334778888888776664

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.82  E-value=0.26  Score=42.01  Aligned_cols=110  Identities=7%  Similarity=-0.040  Sum_probs=69.3

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeec-ccee----------EEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAIN----------ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~----------~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      ..+++++.++.|+-.|.++|+.+.++.... ..+.          .+++.   +..++.++.|+.+.-.|.++|+.+...
T Consensus        70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~---~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY---DGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE---CCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            477778888899999999999887765211 1111          12222   245677788999999999999998776


Q ss_pred             ccccCCCCceEEEEEcc--CCCEEEEEe------cCCcEEEEeccCchhhhhhc
Q psy10348         96 GGVEGHRDEVLSADFDL--LGTKIMSCG------MDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~--~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~  141 (291)
                      .. ..+... ..+.-+|  .+..++.+.      .+|.|.-+|.++++.+..+.
T Consensus       147 ~~-~~~~~~-~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~  198 (527)
T TIGR03075       147 KN-GDYKAG-YTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY  198 (527)
T ss_pred             cc-cccccc-ccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence            31 111110 0111112  123455543      26899999999999876654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG2280|consensus

Probab=96.70  E-value=0.21  Score=43.11  Aligned_cols=88  Identities=17%  Similarity=0.244  Sum_probs=55.4

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeecc-ccCCCCceEEEEEccCC
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG-VEGHRDEVLSADFDLLG  114 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~  114 (291)
                      -.|+||+.. |+++..+....+.+..+.|+. + ..|+....+|++.+|++- |+.+..... .......|..+.+..+|
T Consensus        64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~-~-eeLI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~G  139 (829)
T KOG2280|consen   64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSD-D-EELICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNG  139 (829)
T ss_pred             eeEEEEecc-ccchHHHHhcCCCeeeecccC-C-ceEEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCc
Confidence            358888864 777776665556889999996 5 556666899999999986 444433210 02233456666666666


Q ss_pred             CEEEEEecCCcEEEE
Q psy10348        115 TKIMSCGMDHSLKLW  129 (291)
Q Consensus       115 ~~l~~~~~d~~i~v~  129 (291)
                      -.+++.  +|.+.+-
T Consensus       140 Vavlt~--~g~v~~i  152 (829)
T KOG2280|consen  140 VAVLTV--SGQVILI  152 (829)
T ss_pred             eEEEec--CCcEEEE
Confidence            444444  4555443

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.60  E-value=0.25  Score=38.84  Aligned_cols=111  Identities=13%  Similarity=0.026  Sum_probs=68.3

Q ss_pred             EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeeecc-------ceeEEEEecCCCcEEEEee-
Q psy10348         15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGHGH-------AINELKFHPQDFNLLLSVS-   76 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~s~~-   76 (291)
                      .+..+|++    +.+++++          .+-.|.+||.++..+...+.-...       ....++++. ++++++... 
T Consensus        40 ~~~~spdg----k~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~-dgk~~~V~N~  114 (342)
T PF06433_consen   40 NVALSPDG----KTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSA-DGKFLYVQNF  114 (342)
T ss_dssp             EEEE-TTS----SEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-T-TSSEEEEEEE
T ss_pred             ceeECCCC----CEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEcc-CCcEEEEEcc
Confidence            45667777    4666642          345799999999877765542221       223456677 777776653 


Q ss_pred             -cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEecc-Cchhh
Q psy10348         77 -KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLT-KPEIK  137 (291)
Q Consensus        77 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~-~~~~~  137 (291)
                       -...|.|-|+..++.+..+.    - ..+..+ + |. .+.|.+-+.||++.-..+. .|+..
T Consensus       115 TPa~SVtVVDl~~~kvv~ei~----~-PGC~~i-y-P~~~~~F~~lC~DGsl~~v~Ld~~Gk~~  171 (342)
T PF06433_consen  115 TPATSVTVVDLAAKKVVGEID----T-PGCWLI-Y-PSGNRGFSMLCGDGSLLTVTLDADGKEA  171 (342)
T ss_dssp             SSSEEEEEEETTTTEEEEEEE----G-TSEEEE-E-EEETTEEEEEETTSCEEEEEETSTSSEE
T ss_pred             CCCCeEEEEECCCCceeeeec----C-CCEEEE-E-ecCCCceEEEecCCceEEEEECCCCCEe
Confidence             34568888888888777662    1 112222 2 22 2468888889999999998 45544

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.56  E-value=0.16  Score=43.79  Aligned_cols=111  Identities=16%  Similarity=0.140  Sum_probs=63.4

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecC------------CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGS------------RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~------------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d   78 (291)
                      .....-.|+|++.    .+++...            .+.+.+.+++.++..+   ...+.|..+.|+| ||..++... +
T Consensus       397 ~~~t~PsWspDG~----~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSp-DG~RiA~i~-~  467 (591)
T PRK13616        397 HSLTRPSWSLDAD----AVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSR-DGVRAAMII-G  467 (591)
T ss_pred             CCCCCceECCCCC----ceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECC-CCCEEEEEE-C
Confidence            3467778888863    5555432            2334433444433322   2356799999999 888877765 5


Q ss_pred             CeEEE---EECCCcceeee--eccc-cCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         79 HTLRL---WNIKTDICIAI--FGGV-EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        79 g~i~v---wd~~~~~~~~~--~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      |.|.+   -....|. ...  ...+ ..-...+.++.|..++.++ .+..++.-.+|.+.
T Consensus       468 g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~  525 (591)
T PRK13616        468 GKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVN  525 (591)
T ss_pred             CEEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEe
Confidence            77777   3433443 111  0001 2233446889999988754 55555545555543

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.48  E-value=0.019  Score=29.66  Aligned_cols=32  Identities=19%  Similarity=0.289  Sum_probs=27.1

Q ss_pred             cceeEEEEecCCC--cEEEEeecCCeEEEEECCC
Q psy10348         57 HAINELKFHPQDF--NLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        57 ~~v~~~~~~~~~~--~~l~s~~~dg~i~vwd~~~   88 (291)
                      +.|.+++|+|..+  ++|+-+-.-|.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            4689999998555  6888888889999999985

It contains a characteristic DLL sequence motif.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.46  E-value=0.19  Score=39.45  Aligned_cols=101  Identities=11%  Similarity=0.049  Sum_probs=62.5

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CCeEEEEECCC--c----ceeeeeccccCCCCceEEE
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTLRLWNIKT--D----ICIAIFGGVEGHRDEVLSA  108 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~--~----~~~~~~~~~~~~~~~i~~~  108 (291)
                      |.|+.++. .+..++.+..+-..-+.|+|+| +++.|+.+.. .+.|.-|++..  +    +.....  .....+..-.+
T Consensus       143 G~lyr~~p-~g~~~~l~~~~~~~~NGla~Sp-Dg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~--~~~~~G~PDG~  218 (307)
T COG3386         143 GSLYRVDP-DGGVVRLLDDDLTIPNGLAFSP-DGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVD--FDEEPGLPDGM  218 (307)
T ss_pred             ceEEEEcC-CCCEEEeecCcEEecCceEECC-CCCEEEEEeCCCCeEEEEecCcccCccCCcceEEE--ccCCCCCCCce
Confidence            44555554 4666666666556668899999 7766666544 47788887752  1    111111  12334555567


Q ss_pred             EEccCCCEEEEEecCC-cEEEEeccCchhhhhhc
Q psy10348        109 DFDLLGTKIMSCGMDH-SLKLWDLTKPEIKDACA  141 (291)
Q Consensus       109 ~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~  141 (291)
                      +...+|.+.+++..+| .|..|+.. ++.+..+.
T Consensus       219 ~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~  251 (307)
T COG3386         219 AVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIK  251 (307)
T ss_pred             EEeCCCCEEEecccCCceEEEECCC-CcEEEEEE
Confidence            7777888776555554 89999988 77665543

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.34  E-value=0.12  Score=44.35  Aligned_cols=102  Identities=18%  Similarity=0.188  Sum_probs=66.0

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEec-CCCcEEEEeecCCeEEEEECCC---------cceeeeec
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNIKT---------DICIAIFG   96 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~   96 (291)
                      ..++-+....+.|||...+.....-. ...+.|..+.|.. .+++.+++.+..+.|.++.-..         -..++.+.
T Consensus        43 ~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~  122 (631)
T PF12234_consen   43 IAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKID  122 (631)
T ss_pred             EEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEE
Confidence            33333344679999998776443222 3468899999953 2677888888889999985421         12233322


Q ss_pred             cccCCC-CceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         97 GVEGHR-DEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        97 ~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                       +..++ .+|.+..|.++|.+++.++  ..+.|+|-.
T Consensus       123 -i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  123 -ISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             -eecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence             13344 6899999999997665553  668888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG1900|consensus

Probab=96.31  E-value=0.075  Score=48.47  Aligned_cols=163  Identities=12%  Similarity=0.144  Sum_probs=88.9

Q ss_pred             ecCCCeEEEEccCCcceeEEEeeeccceeEEEEe-cC------CCcEEEEeecCCeEEEEECCCccee---eeec---cc
Q psy10348         32 AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFH-PQ------DFNLLLSVSKDHTLRLWNIKTDICI---AIFG---GV   98 (291)
Q Consensus        32 ~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~-~~------~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~---~~   98 (291)
                      .+.|+.+.+|+.+++.....+.+-+..|..+..- |.      .=++++.-..--.|.++-+.-.+..   ..+.   .+
T Consensus        95 iTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i  174 (1311)
T KOG1900|consen   95 ITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKI  174 (1311)
T ss_pred             EEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceee
Confidence            3568899999999987777777666666666542 20      1123333333445666544321111   1110   00


Q ss_pred             cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-ccccCCCCccccccCccccCcccccc-cccCccee
Q psy10348         99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-SYTFNPARSTRPFDTQKEHFPQFSTR-DIHRNYVD  176 (291)
Q Consensus        99 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~  176 (291)
                      ......|.|+....+|+.|++|- ||  .+|.+.-.....-+.. +....+..+...  .+   .|.+... ..+..+|.
T Consensus       175 ~~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls--~l---vPs~~~~~~~~~dpI~  246 (1311)
T KOG1900|consen  175 SVDGVSVNCITYTENGRIFFAGR-DG--NLYELVYQAEDGWFGSRCRKICLTKSVLS--SL---VPSLLSVPGSSKDPIR  246 (1311)
T ss_pred             ecCCceEEEEEeccCCcEEEeec-CC--CEEEEEEeccCchhhcccccccCchhHHH--Hh---hhhhhcCCCCCCCcce
Confidence            22356788999777787666555 55  5665532221111111 111111111100  00   0111111 24788999


Q ss_pred             EEEEc--CCEEEEecCCCeEEEecCCCC
Q psy10348        177 CVRWL--GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       177 ~~~~~--~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      .+..+  .+.+++-+..++|.+||+...
T Consensus       247 qi~ID~SR~IlY~lsek~~v~~Y~i~~~  274 (1311)
T KOG1900|consen  247 QITIDNSRNILYVLSEKGTVSAYDIGGN  274 (1311)
T ss_pred             eeEeccccceeeeeccCceEEEEEccCC
Confidence            99998  568999999999999999763

>KOG1897|consensus

Probab=96.31  E-value=0.76  Score=41.17  Aligned_cols=151  Identities=17%  Similarity=0.243  Sum_probs=101.2

Q ss_pred             eEEEEeeeccCCCCCEEEEecC----------CCeEEEEccCCcceeEEEeee--ccceeEEEEecCCCcEEEEeecCCe
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGS----------RAVIRIFSPAFHACVRHFYGH--GHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      +.++.|..|.+   .++++|..          .|.|.|+....+..++.+..+  ++.+.++..-  +++++|.  -+..
T Consensus       777 i~s~~~~~d~~---t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f--ngkllA~--In~~  849 (1096)
T KOG1897|consen  777 IISCKFTDDPN---TYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF--NGKLLAG--INQS  849 (1096)
T ss_pred             eeeeeecCCCc---eEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh--CCeEEEe--cCcE
Confidence            33444766643   68888753          488888888774444444322  3556665544  4566654  4578


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch--hhhhhccccccCCCCccccccCc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE--IKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      |++|++.+++.++.-   ..+..++..+...-.|..++.|..=+++.+...+..+  ....                   
T Consensus       850 vrLye~t~~~eLr~e---~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~ev-------------------  907 (1096)
T KOG1897|consen  850 VRLYEWTTERELRIE---CNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEV-------------------  907 (1096)
T ss_pred             EEEEEccccceehhh---hcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEe-------------------
Confidence            999999988666655   5788899999998899999999988888776554433  2111                   


Q ss_pred             cccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~  200 (291)
                              ..+-+..+.+++.+- ++.++.+..+|.+.+....
T Consensus       908 --------ArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  908 --------ARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKD  942 (1096)
T ss_pred             --------ehhhCccceeeEEEecCceEEeecccccEEEEEec
Confidence                    112366777788776 6677777778888776554

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.26  E-value=0.022  Score=29.41  Aligned_cols=31  Identities=10%  Similarity=0.040  Sum_probs=26.1

Q ss_pred             CceEEEEEccCC---CEEEEEecCCcEEEEeccC
Q psy10348        103 DEVLSADFDLLG---TKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus       103 ~~i~~~~~~~~~---~~l~~~~~d~~i~v~d~~~  133 (291)
                      +.|+++.|+|..   .+|+.+-.-|.|.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            468999999854   4888888889999999995

It contains a characteristic DLL sequence motif.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.24  E-value=0.1  Score=44.70  Aligned_cols=99  Identities=8%  Similarity=0.061  Sum_probs=67.5

Q ss_pred             CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC-----
Q psy10348        182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD-----  256 (291)
Q Consensus       182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-----  256 (291)
                      ++..++.+....+.|||.+....          ..-..+ .....|..++|...|+++.+.+.+-.+.|.+|.-.     
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~l----------E~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~  109 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVL----------EYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT  109 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEE----------EEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence            44555555667999999987753          112223 44667888999999999999999989999998653     


Q ss_pred             CCCCCcceeEEEeccccc-cceeeeEEccCCceeeC
Q psy10348        257 VQDPSSIKFQILSHPRCM-SAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~s  291 (291)
                      +..+.......+....++ .+|.+..|-++|..+++
T Consensus       110 ~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~  145 (631)
T PF12234_consen  110 NKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVG  145 (631)
T ss_pred             cCCcccceeEEEEeecCCCCCccceeEecCCeEEEE
Confidence            222222223333333333 58999999999998863

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2377|consensus

Probab=96.10  E-value=0.61  Score=38.06  Aligned_cols=124  Identities=8%  Similarity=0.115  Sum_probs=82.3

Q ss_pred             CceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce----eEEEeeeccceeEEEEecCCCcEEEEeec
Q psy10348          2 STRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC----VRHFYGHGHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus         2 ~~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      |+.+....+++|.++.||+|.    +.+|+--.+.+|.+++....+.    ..+-+..+..|....|+. + .-+|.-..
T Consensus        58 piSfdm~d~G~I~SIkFSlDn----kilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~-s-~e~A~i~~  131 (657)
T KOG2377|consen   58 PISFDMDDKGEIKSIKFSLDN----KILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTS-S-TEIAFITD  131 (657)
T ss_pred             CceeeecCCCceeEEEeccCc----ceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEec-C-eeEEEEec
Confidence            345666678899999999998    5999999999999999743222    122233445688999986 4 55555555


Q ss_pred             CCeEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEEEEEe--cCCcEEEEeccCch
Q psy10348         78 DHTLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPE  135 (291)
Q Consensus        78 dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~  135 (291)
                      .| +-+|.... .+.++..   +.|+..|.--.|.++.+.++-++  ..+++.=+-++++.
T Consensus       132 ~G-~e~y~v~pekrslRlV---ks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~  188 (657)
T KOG2377|consen  132 QG-IEFYQVLPEKRSLRLV---KSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGT  188 (657)
T ss_pred             CC-eEEEEEchhhhhhhhh---hhcccCccEEEEccccceEeeeccccccccccEEEeece
Confidence            55 66665432 2333444   67888999999999887544333  34455545555544

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.06  E-value=0.57  Score=37.41  Aligned_cols=108  Identities=16%  Similarity=0.137  Sum_probs=56.6

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce---eEEE----eeeccceeEEEEecC---CCcEEEEeecC---
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC---VRHF----YGHGHAINELKFHPQ---DFNLLLSVSKD---   78 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~~l~s~~~d---   78 (291)
                      .-++++|.|++    .+++ +...|.|++++ ..+..   +..+    .........++++|+   ++.+.+..+..   
T Consensus         3 ~P~~~a~~pdG----~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~   76 (331)
T PF07995_consen    3 NPRSMAFLPDG----RLLV-AERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADED   76 (331)
T ss_dssp             SEEEEEEETTS----CEEE-EETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TS
T ss_pred             CceEEEEeCCC----cEEE-EeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCC
Confidence            35789999997    3544 56699999999 44443   2222    122356789999982   24444444421   


Q ss_pred             -----CeEEEEECCCc-----ceeeeecccc---CCCCceEEEEEccCCCEEEEEecCCc
Q psy10348         79 -----HTLRLWNIKTD-----ICIAIFGGVE---GHRDEVLSADFDLLGTKIMSCGMDHS  125 (291)
Q Consensus        79 -----g~i~vwd~~~~-----~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~  125 (291)
                           ..|.-|....+     .....+..+.   .....-..+.|.|+|.+.++.+..+.
T Consensus        77 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~  136 (331)
T PF07995_consen   77 GGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN  136 (331)
T ss_dssp             SSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT
T ss_pred             CCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC
Confidence                 23444544333     1111111111   23345567999999976666665443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG3630|consensus

Probab=96.03  E-value=0.068  Score=48.05  Aligned_cols=122  Identities=8%  Similarity=-0.028  Sum_probs=78.3

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-----EEEe------eeccceeEEEEecCCCcEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-----RHFY------GHGHAINELKFHPQDFNLLL   73 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-----~~~~------~~~~~v~~~~~~~~~~~~l~   73 (291)
                      +.+...-++..+...+|..  ...+...+.+-.|..||+++-..-     .-+.      .......++.|+|.-....+
T Consensus        95 ~~v~k~~pi~~~v~~~D~t--~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~a  172 (1405)
T KOG3630|consen   95 FKVEKEIPIVIFVCFHDAT--DSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSA  172 (1405)
T ss_pred             eeeeccccceEEEeccCCc--eEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhh
Confidence            3444455566666666742  012222233447889998643211     1111      12345678889995556677


Q ss_pred             EeecCCeEEEEECCCcce-eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         74 SVSKDHTLRLWNIKTDIC-IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        74 s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      ....|+.|++..+..... +..+    ......++++|+|.|+.++.|-..|++.-|...
T Consensus       173 v~l~dlsl~V~~~~~~~~~v~s~----p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~  228 (1405)
T KOG3630|consen  173 VDLSDLSLRVKSTKQLAQNVTSF----PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS  228 (1405)
T ss_pred             hhccccchhhhhhhhhhhhhccc----CcccceeeEEeccccceeeEecCCCeEEEeecc
Confidence            788899999887753322 2222    456778999999999999999999999888654

>KOG3630|consensus

Probab=95.97  E-value=0.16  Score=45.80  Aligned_cols=155  Identities=10%  Similarity=-0.025  Sum_probs=87.2

Q ss_pred             CCceEEEEEccCCCEEEEE--ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        102 RDEVLSADFDLLGTKIMSC--GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                      .-+|..+...+|+...++.  +.+-.|..||+++.........          .++..       ..+.........++.
T Consensus       100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~----------~pl~~-------s~ts~ek~vf~~~~~  162 (1405)
T KOG3630|consen  100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETT----------VPLKN-------SATSFEKPVFQLKNV  162 (1405)
T ss_pred             cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhc----------ccccc-------ccchhcccccccccc
Confidence            3456666667776654433  3345789999987654322110          00000       000001222345667


Q ss_pred             Ec---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        180 WL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       180 ~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      |+   ....+....|+.|++..+......           +..+.   -.....+++|+|.|+.+++|-..|++.-|...
T Consensus       163 wnP~vp~n~av~l~dlsl~V~~~~~~~~~-----------v~s~p---~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~  228 (1405)
T KOG3630|consen  163 WNPLVPLNSAVDLSDLSLRVKSTKQLAQN-----------VTSFP---VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS  228 (1405)
T ss_pred             ccCCccchhhhhccccchhhhhhhhhhhh-----------hcccC---cccceeeEEeccccceeeEecCCCeEEEeecc
Confidence            76   345677778999988877544221           22222   22234566777889999999999999999866


Q ss_pred             CCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        257 VQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      -............   ....|.+|.|-....+|+
T Consensus       229 leik~~ip~Pp~~---e~yrvl~v~Wl~t~eflv  259 (1405)
T KOG3630|consen  229 LEIKSEIPEPPVE---ENYRVLSVTWLSTQEFLV  259 (1405)
T ss_pred             cceeecccCCCcC---CCcceeEEEEecceeEEE
Confidence            5421100001111   136899999987777665

>PHA03098 kelch-like protein; Provisional

Probab=95.94  E-value=0.57  Score=40.22  Aligned_cols=103  Identities=7%  Similarity=-0.031  Sum_probs=50.3

Q ss_pred             CEEEEecCC-----CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC------CeEEEEECCCcceee
Q psy10348         27 PLLAVAGSR-----AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD------HTLRLWNIKTDICIA   93 (291)
Q Consensus        27 ~~l~~~~~d-----g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~   93 (291)
                      .+++.||.+     ..+..||..+++-..  .+. +...-.+++..  ++.+.+.|+.+      ..+..||..+++...
T Consensus       344 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp-~~r~~~~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~  420 (534)
T PHA03098        344 RIYVIGGIYNSISLNTVESWKPGESKWREEPPLI-FPRYNPCVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNKWSK  420 (534)
T ss_pred             EEEEEeCCCCCEecceEEEEcCCCCceeeCCCcC-cCCccceEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCeeee
Confidence            477777765     357778877654221  111 11111122222  55777777632      357889988765433


Q ss_pred             eeccccCCCCceEEEEEccCCCEEEEEecCC--------cEEEEeccCch
Q psy10348         94 IFGGVEGHRDEVLSADFDLLGTKIMSCGMDH--------SLKLWDLTKPE  135 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------~i~v~d~~~~~  135 (291)
                      .- .+....... ++. ..++..++.|+.++        .+.+||..+.+
T Consensus       421 ~~-~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        421 GS-PLPISHYGG-CAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             cC-CCCccccCc-eEE-EECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            21 111111111 122 22455666665432        26777776654

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.92  E-value=0.43  Score=34.82  Aligned_cols=149  Identities=14%  Similarity=0.126  Sum_probs=83.5

Q ss_pred             EEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEecCCCcEEEEeecC---C---eEEEE-ECCC----cceee-
Q psy10348         28 LLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---H---TLRLW-NIKT----DICIA-   93 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g---~i~vw-d~~~----~~~~~-   93 (291)
                      .|+.+.....|.+|++.  ..+++..|.. -+.|..+.++. .|++|+|-=.+   .   .+++| +++.    ..++. 
T Consensus        30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~-~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   30 ALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSE-AGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             eEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEecc-ccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            44443556789999987  3355666664 48899999999 89999995322   2   56665 2221    11111 


Q ss_pred             -eec----------------c-ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh-hhhccccccCCCCcccc
Q psy10348         94 -IFG----------------G-VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK-DACAESYTFNPARSTRP  154 (291)
Q Consensus        94 -~~~----------------~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~  154 (291)
                       ...                . --.-..++.+++..|....|+.|+ ++.+.+|.+...... ..+. -++|...     
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~-~lDFe~~-----  180 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFS-FLDFERS-----  180 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEeccccc-EEechhh-----
Confidence             100                0 011234567788888655566666 577999998765531 1110 0011100     


Q ss_pred             ccCccccCccccccccc-CcceeEEEEcCCEEEEecCCCeEEEec
Q psy10348        155 FDTQKEHFPQFSTRDIH-RNYVDCVRWLGDFVLSKSCENCIICWK  198 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d~~i~iwd  198 (291)
                                  ....| .-....+++.+++++..+ +-.++++.
T Consensus       181 ------------l~~~~~~~~p~~v~ic~~yiA~~s-~~ev~Vlk  212 (215)
T PF14761_consen  181 ------------LIDHIDNFKPTQVAICEGYIAVMS-DLEVLVLK  212 (215)
T ss_pred             ------------hhheecCceEEEEEEEeeEEEEec-CCEEEEEE
Confidence                        00112 223567888889988876 44555544

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.90  E-value=0.55  Score=35.96  Aligned_cols=211  Identities=13%  Similarity=0.128  Sum_probs=111.5

Q ss_pred             eeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        53 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      .+-...+.++.|+| +.+.|++......-.|+=-.+|+.+..+. +.+ -.....+.+..+|++.++--.++.+.++.+.
T Consensus        82 ~g~~~nvS~LTynp-~~rtLFav~n~p~~iVElt~~GdlirtiP-L~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd  158 (316)
T COG3204          82 LGETANVSSLTYNP-DTRTLFAVTNKPAAIVELTKEGDLIRTIP-LTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVD  158 (316)
T ss_pred             ccccccccceeeCC-CcceEEEecCCCceEEEEecCCceEEEec-ccc-cCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence            34445699999999 55666665556666666556688888763 122 2334567888888877777779999998887


Q ss_pred             CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc-cccc
Q psy10348        133 KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK-ELRT  209 (291)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~-~~~~  209 (291)
                      ...........        ..++          ......+.....++|+  ...|+.+-+-.-+.||........ ....
T Consensus       159 ~~t~~~~~~~~--------~i~L----------~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~  220 (316)
T COG3204         159 ADTTVISAKVQ--------KIPL----------GTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHA  220 (316)
T ss_pred             CCccEEeccce--------EEec----------cccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccccccc
Confidence            66433222210        0000          0001114456678888  556666777777777766533211 0000


Q ss_pred             CCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccccc---ceeeeEEccCC
Q psy10348        210 NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS---AVRQTTLSKNG  286 (291)
Q Consensus       210 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~g  286 (291)
                      ...+ .....+  .-..+..+.+.. +.+.+|+.+.+++.+.-.|....- +......-...+...   ..-.++..++|
T Consensus       221 ~~~~-~~~~~~--f~~DvSgl~~~~-~~~~LLVLS~ESr~l~Evd~~G~~-~~~lsL~~g~~gL~~dipqaEGiamDd~g  295 (316)
T COG3204         221 SLDP-TADRDL--FVLDVSGLEFNA-ITNSLLVLSDESRRLLEVDLSGEV-IELLSLTKGNHGLSSDIPQAEGIAMDDDG  295 (316)
T ss_pred             ccCc-ccccce--EeeccccceecC-CCCcEEEEecCCceEEEEecCCCe-eeeEEeccCCCCCcccCCCcceeEECCCC
Confidence            0000 000000  001122222222 246677777788877777776542 211111111112111   34567888887


Q ss_pred             cee
Q psy10348        287 NVL  289 (291)
Q Consensus       287 ~~l  289 (291)
                      ..-
T Consensus       296 ~lY  298 (316)
T COG3204         296 NLY  298 (316)
T ss_pred             CEE
Confidence            643

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.85  E-value=0.47  Score=34.65  Aligned_cols=49  Identities=10%  Similarity=0.224  Sum_probs=35.6

Q ss_pred             cEEEEeecCCeEEEEECC--CcceeeeeccccCCCCceEEEEEccCCCEEEEEec
Q psy10348         70 NLLLSVSKDHTLRLWNIK--TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM  122 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  122 (291)
                      +.|+.+...+.|.+|++.  ..+....|    .--+.|..+.++..|++++|--.
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F----~Tv~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTF----STVGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEE----cchhheeEEEeccccceEEEEEe
Confidence            444444566889999988  33445555    34488999999999999998643

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.77  E-value=1.3  Score=39.26  Aligned_cols=77  Identities=14%  Similarity=0.256  Sum_probs=52.3

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCC----------cce--e-eee--c---cccCCCCceEEEEEccC---CC
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKT----------DIC--I-AIF--G---GVEGHRDEVLSADFDLL---GT  115 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~--~-~~~--~---~~~~~~~~i~~~~~~~~---~~  115 (291)
                      -.|..+.++| +|.+++..|..|.+.+ .+..          |+.  . +.+  .   -...+...|..+.|+|.   +.
T Consensus        85 f~v~~i~~n~-~g~~lal~G~~~v~V~-~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   85 FEVHQISLNP-TGSLLALVGPRGVVVL-ELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             eeEEEEEECC-CCCEEEEEcCCcEEEE-EeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            4678888999 9999999888765443 3321          111  1 111  0   01245568999999997   46


Q ss_pred             EEEEEecCCcEEEEeccCch
Q psy10348        116 KIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus       116 ~l~~~~~d~~i~v~d~~~~~  135 (291)
                      .|+.-..|+++|+||+....
T Consensus       163 ~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             eEEEEecCCEEEEEecCCCC
Confidence            88888889999999997543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG4499|consensus

Probab=95.74  E-value=0.41  Score=35.34  Aligned_cols=100  Identities=12%  Similarity=-0.015  Sum_probs=64.8

Q ss_pred             ccceeEEEEecCCCcEEEEeecCCeEEEEE--CCCcc-----eeeeeccccCCC-CceEEEEEccCCCEEEEEecCCcEE
Q psy10348         56 GHAINELKFHPQDFNLLLSVSKDHTLRLWN--IKTDI-----CIAIFGGVEGHR-DEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd--~~~~~-----~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      -.--+.++|+.+...+.++-+.+-+|.-||  ..+|.     .+..++..+... ...-.++...+|.+.++.-..++|.
T Consensus       157 v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~  236 (310)
T KOG4499|consen  157 VGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQ  236 (310)
T ss_pred             ccCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEE
Confidence            344567899874455666667788888887  55553     222222111111 1122344566788888888889999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCC
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD  183 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  183 (291)
                      ..|..+++.+.++.-                            ....|++++|-|.
T Consensus       237 ~~dp~tGK~L~eikl----------------------------Pt~qitsccFgGk  264 (310)
T KOG4499|consen  237 KVDPTTGKILLEIKL----------------------------PTPQITSCCFGGK  264 (310)
T ss_pred             EECCCCCcEEEEEEc----------------------------CCCceEEEEecCC
Confidence            999999998776642                            4667999999743

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=95.69  E-value=0.78  Score=36.08  Aligned_cols=174  Identities=11%  Similarity=0.069  Sum_probs=93.1

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEeec-----------CCeEEEEECCCcce
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVSK-----------DHTLRLWNIKTDIC   91 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~-----------dg~i~vwd~~~~~~   91 (291)
                      .|+++..  .+++++.+++..+..+..     .....+.+...| +|.+.++.-.           -|.|+..|. .+..
T Consensus        79 ~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~  154 (307)
T COG3386          79 RLIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGV  154 (307)
T ss_pred             eEEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcC-CCCE
Confidence            4554432  356666665555333221     113456777888 7776665433           133444443 4565


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccC--chhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTK--PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++.+   ..+-..-+.++|||+++.|+.+.. .+.|.-|++..  +..... .                      .+...
T Consensus       155 ~~l~---~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~-~----------------------~~~~~  208 (307)
T COG3386         155 VRLL---DDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGR-R----------------------GFVDF  208 (307)
T ss_pred             EEee---cCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCc-c----------------------eEEEc
Confidence            5555   444555678999999998887765 47788887763  111100 0                      00000


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                      ....+....++.+  |++.+++..+| .|.+|+.. ++.            +..+..+...+..++|. .|+.+.|++.+
T Consensus       209 ~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l------------~~~i~lP~~~~t~~~Fg-G~~~~~L~iTs  274 (307)
T COG3386         209 DEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKL------------LGEIKLPVKRPTNPAFG-GPDLNTLYITS  274 (307)
T ss_pred             cCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcE------------EEEEECCCCCCccceEe-CCCcCEEEEEe
Confidence            1123334445554  55554444444 99999987 533            56666554445555554 23345554444

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=95.66  E-value=0.041  Score=44.39  Aligned_cols=154  Identities=17%  Similarity=0.107  Sum_probs=88.0

Q ss_pred             cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCccee-E
Q psy10348         99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVD-C  177 (291)
Q Consensus        99 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~  177 (291)
                      ......+..+-..|+|+.++.-+. .++.++++.+......  +-.+-.|...                    ...|+ .
T Consensus       217 ~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~r--kl~~dspg~~--------------------~~~Vte~  273 (733)
T COG4590         217 SVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIR--KLVDDSPGDS--------------------RHQVTEQ  273 (733)
T ss_pred             CCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchh--hhhhcCCCch--------------------HHHHHHH
Confidence            455667788889999998877665 7799999877654322  1111111110                    01111 1


Q ss_pred             EE-Ec-CCEEEEecCCCeEEEe-cCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        178 VR-WL-GDFVLSKSCENCIICW-KPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       178 ~~-~~-~~~l~~~~~d~~i~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      +. .. |.-++.++.||.|.-| |.+......+       ..++.++.....+..  +.++.+.+-+++-+.+|++.++.
T Consensus       274 l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~p~l-------~h~R~f~l~pa~~~~--l~pe~~rkgF~~l~~~G~L~~f~  344 (733)
T COG4590         274 LYLLSGGFSLLVVHEDGLVSQWFDVRRDGQPHL-------NHIRNFKLAPAEVQF--LLPETNRKGFYSLYRNGTLQSFY  344 (733)
T ss_pred             HHHHhCceeEEEEcCCCceeeeeeeecCCCCcc-------eeeeccccCccccee--eccccccceEEEEcCCCceeeee
Confidence            11 11 5577888899988877 4444332211       223444444343433  34444567788888899998887


Q ss_pred             cCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        255 LDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      -...+.      .+.. ..-..+.-+++||.+.+|++
T Consensus       345 st~~~~------lL~~-~~~~~~~~~~~Sp~~~~Ll~  374 (733)
T COG4590         345 STSEKL------LLFE-RAYQAPQLVAMSPNQAYLLS  374 (733)
T ss_pred             cccCcc------eehh-hhhcCcceeeeCcccchhee
Confidence            655432      1211 11225566899999888763

>PHA02790 Kelch-like protein; Provisional

Probab=95.62  E-value=0.64  Score=39.31  Aligned_cols=100  Identities=7%  Similarity=-0.096  Sum_probs=48.4

Q ss_pred             CEEEEecCC--CeEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeecCC---eEEEEECCCcceeeeecccc
Q psy10348         27 PLLAVAGSR--AVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSKDH---TLRLWNIKTDICIAIFGGVE   99 (291)
Q Consensus        27 ~~l~~~~~d--g~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~   99 (291)
                      .+.+.||.+  ..+..||..+++-.  ..+.. ...-.+++..  ++.+.+.|+.++   .+..||.++++....- .+.
T Consensus       320 ~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~-~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~-~m~  395 (480)
T PHA02790        320 KLYVVGGLPNPTSVERWFHGDAAWVNMPSLLK-PRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHDQWQFGP-STY  395 (480)
T ss_pred             EEEEECCcCCCCceEEEECCCCeEEECCCCCC-CCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCCEEEeCC-CCC
Confidence            467777753  35777887654322  11211 1111122222  567778877654   4678888766543321 111


Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      ........+.  -++...+.|   |.+.+||.++.+
T Consensus       396 ~~r~~~~~~~--~~~~IYv~G---G~~e~ydp~~~~  426 (480)
T PHA02790        396 YPHYKSCALV--FGRRLFLVG---RNAEFYCESSNT  426 (480)
T ss_pred             CccccceEEE--ECCEEEEEC---CceEEecCCCCc
Confidence            1111112222  245555555   346778776543

>KOG1898|consensus

Probab=95.58  E-value=1.7  Score=39.37  Aligned_cols=179  Identities=10%  Similarity=0.127  Sum_probs=104.5

Q ss_pred             eEEEEccCCcceeEEEeeec----cceeEEEEecCCCc-EEEEee-----------cCCeEEEEECC-Ccceeeeecccc
Q psy10348         37 VIRIFSPAFHACVRHFYGHG----HAINELKFHPQDFN-LLLSVS-----------KDHTLRLWNIK-TDICIAIFGGVE   99 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~-~l~s~~-----------~dg~i~vwd~~-~~~~~~~~~~~~   99 (291)
                      .|++.|..+++.+..+....    -.+.++.|+..+.. ++++|.           .+|.++.|++- .|+.+..+.. .
T Consensus       854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~-T  932 (1205)
T KOG1898|consen  854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHK-T  932 (1205)
T ss_pred             eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeec-c
Confidence            48888888877666554222    24666777653333 444442           23446666653 3443333311 1


Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                      .-..+|  .+..|...++++|- ...+++||+...+++++....                          .-...|+.++
T Consensus       933 ~~~~~v--~Ai~~f~~~~Lagv-G~~l~~YdlG~K~lLRk~e~k--------------------------~~p~~Is~iq  983 (1205)
T KOG1898|consen  933 EIPGPV--GAICPFQGRVLAGV-GRFLRLYDLGKKKLLRKCELK--------------------------FIPNRISSIQ  983 (1205)
T ss_pred             CCCccc--eEEeccCCEEEEec-ccEEEEeeCChHHHHhhhhhc--------------------------cCceEEEEEe
Confidence            223333  44557666655554 578999999998887765421                          1356688999


Q ss_pred             EcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        180 WLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      +.+..++.|.....+.++..+....           .+..+....-+-+..+... -|...+|.+..=|.+.+..+..
T Consensus       984 t~~~RI~VgD~qeSV~~~~y~~~~n-----------~l~~fadD~~pR~Vt~~~~-lD~~tvagaDrfGNi~~vR~P~ 1049 (1205)
T KOG1898|consen  984 TYGARIVVGDIQESVHFVRYRREDN-----------QLIVFADDPVPRHVTALEL-LDYDTVAGADRFGNIAVVRIPP 1049 (1205)
T ss_pred             ecceEEEEeeccceEEEEEEecCCC-----------eEEEEeCCCccceeeEEEE-ecCCceeeccccCcEEEEECCC
Confidence            9888888888877666655444322           2444444443333333332 2367788887778777776653

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.50  E-value=0.9  Score=35.56  Aligned_cols=155  Identities=10%  Similarity=0.073  Sum_probs=74.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC-C
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK-T   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~   88 (291)
                      ...+..+.-++++    .+++++..-....-||.-...-...-..-...|..|.|.| ++.+.+.+ ..|.|+.=+.. .
T Consensus       144 ~gs~~~~~r~~dG----~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~-~~~lw~~~-~Gg~~~~s~~~~~  217 (302)
T PF14870_consen  144 SGSINDITRSSDG----RYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSP-DGNLWMLA-RGGQIQFSDDPDD  217 (302)
T ss_dssp             ---EEEEEE-TTS-----EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-T-TS-EEEEE-TTTEEEEEE-TTE
T ss_pred             cceeEeEEECCCC----cEEEEECcccEEEEecCCCccceEEccCccceehhceecC-CCCEEEEe-CCcEEEEccCCCC
Confidence            3566777777777    5888887666666777532211222223457899999999 76665544 78888887722 2


Q ss_pred             cceeee-eccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         89 DICIAI-FGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        89 ~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      .+.... +.....-.-.+..++|.+++...++|+ .|.+.+ ..+.++.=+.-.                         .
T Consensus       218 ~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l~~-S~DgGktW~~~~-------------------------~  270 (302)
T PF14870_consen  218 GETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTLLV-STDGGKTWQKDR-------------------------V  270 (302)
T ss_dssp             EEEE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-EEE-ESSTTSS-EE-G-------------------------G
T ss_pred             ccccccccCCcccCceeeEEEEecCCCCEEEEeC-CccEEE-eCCCCccceECc-------------------------c
Confidence            221111 111122334589999998887777665 454433 333343211100                         0


Q ss_pred             ccccCcceeEEEEc-CCEEEEecCCCeEEEe
Q psy10348        168 RDIHRNYVDCVRWL-GDFVLSKSCENCIICW  197 (291)
Q Consensus       168 ~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iw  197 (291)
                      ...-..-+..+.|. ++.-..-+.+|.|--|
T Consensus       271 ~~~~~~n~~~i~f~~~~~gf~lG~~G~ll~~  301 (302)
T PF14870_consen  271 GENVPSNLYRIVFVNPDKGFVLGQDGVLLRY  301 (302)
T ss_dssp             GTTSSS---EEEEEETTEEEEE-STTEEEEE
T ss_pred             ccCCCCceEEEEEcCCCceEEECCCcEEEEe
Confidence            00123346677776 5555556668877654

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.38  E-value=0.35  Score=42.11  Aligned_cols=103  Identities=10%  Similarity=0.078  Sum_probs=70.1

Q ss_pred             CEEEEecCCCeEEEEccCC-------c----c---------eeEEEeeeccceeEEEEe--cCCCcEEEEeecCCeEEEE
Q psy10348         27 PLLAVAGSRAVIRIFSPAF-------H----A---------CVRHFYGHGHAINELKFH--PQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~-------~----~---------~~~~~~~~~~~v~~~~~~--~~~~~~l~s~~~dg~i~vw   84 (291)
                      ..|+.+..||.|.+|.+++       .    +         +...+. -...+++++++  . ..++||+++....|.||
T Consensus       115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~-~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYK-KSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecC-cceEEEEecCCceEEEE
Confidence            5899999999999996531       0    0         111222 34578999998  6 67888888888888888


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCC-----C-EEEEEecCCcEEEEec
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLG-----T-KIMSCGMDHSLKLWDL  131 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~-~l~~~~~d~~i~v~d~  131 (291)
                      -............-..+...|.++.|-++.     . .+++++-.|.+.+|++
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            654321111110012467789999997653     2 7788888999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=95.27  E-value=0.95  Score=34.40  Aligned_cols=182  Identities=12%  Similarity=-0.007  Sum_probs=99.1

Q ss_pred             ceeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         58 AINELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        58 ~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      -...+.|.. ++.++-+.+.-|  .|+.+|+.+++......  -...---..++.. +++...-.=.++...+||..+.+
T Consensus        46 FTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~--l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~  121 (264)
T PF05096_consen   46 FTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVP--LPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLK  121 (264)
T ss_dssp             EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE---TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTE
T ss_pred             cCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEE--CCccccceeEEEE-CCEEEEEEecCCeEEEEccccce
Confidence            456788866 778888887776  59999999998765542  1111122233333 22233333448889999999887


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccc---cccCCC
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKE---LRTNET  212 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~  212 (291)
                      .+.++.                             ....=..++.+++.|+.......|.++|..+.+...   +.....
T Consensus       122 ~~~~~~-----------------------------y~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~  172 (264)
T PF05096_consen  122 KIGTFP-----------------------------YPGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGR  172 (264)
T ss_dssp             EEEEEE------------------------------SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTE
T ss_pred             EEEEEe-----------------------------cCCcceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECCE
Confidence            665543                             222334566667777777778899999987765421   111111


Q ss_pred             ceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-------------ccccceee
Q psy10348        213 NVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-------------RCMSAVRQ  279 (291)
Q Consensus       213 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-------------~~~~~v~~  279 (291)
                      +...+.+          +.+.   +|...|-.-....|...|..+++..    ..+...             ....-.+.
T Consensus       173 pv~~LNE----------LE~i---~G~IyANVW~td~I~~Idp~tG~V~----~~iDls~L~~~~~~~~~~~~~~dVLNG  235 (264)
T PF05096_consen  173 PVSNLNE----------LEYI---NGKIYANVWQTDRIVRIDPETGKVV----GWIDLSGLRPEVGRDKSRQPDDDVLNG  235 (264)
T ss_dssp             E---EEE----------EEEE---TTEEEEEETTSSEEEEEETTT-BEE----EEEE-HHHHHHHTSTTST--TTS-EEE
T ss_pred             ECCCcEe----------EEEE---cCEEEEEeCCCCeEEEEeCCCCeEE----EEEEhhHhhhcccccccccccCCeeEe
Confidence            1111222          2222   2555555555566777777776432    111100             11346789


Q ss_pred             eEEccCCcee
Q psy10348        280 TTLSKNGNVL  289 (291)
Q Consensus       280 ~~~s~~g~~l  289 (291)
                      +||.|++..|
T Consensus       236 IAyd~~~~~l  245 (264)
T PF05096_consen  236 IAYDPETDRL  245 (264)
T ss_dssp             EEEETTTTEE
T ss_pred             EeEeCCCCEE
Confidence            9999876655

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.25  E-value=0.78  Score=33.32  Aligned_cols=110  Identities=10%  Similarity=-0.058  Sum_probs=64.7

Q ss_pred             CCEEEEecC--CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCC
Q psy10348         26 RPLLAVAGS--RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD  103 (291)
Q Consensus        26 ~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  103 (291)
                      +.++.+.+.  ...|++||+.+++.+..-.-....+..=-.......+..-.-.+|.-..+|..+-+++..+    ...+
T Consensus        56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~----~y~G  131 (262)
T COG3823          56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRF----SYEG  131 (262)
T ss_pred             CEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccc----ccCC
Confidence            346666553  3579999999998776544221122211111101123333466888899999888877766    3344


Q ss_pred             ceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348        104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus       104 ~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      .=..++-  ++..|+.+....+++.-|..+.....+..
T Consensus       132 eGWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~  167 (262)
T COG3823         132 EGWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQ  167 (262)
T ss_pred             cceeeec--CCcceEeeCCceEEEecCHHHhhhcceEE
Confidence            4455543  55667777666778877777766554443

>KOG4499|consensus

Probab=95.18  E-value=0.67  Score=34.32  Aligned_cols=92  Identities=10%  Similarity=0.072  Sum_probs=62.7

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEc--cCCcce-----eEEEee---ecc-ceeEEEEecCCCcEEEEeecCCeEE
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFS--PAFHAC-----VRHFYG---HGH-AINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~--~~~~~~-----~~~~~~---~~~-~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      +.++|+.+..   .+.++-+.+-.|.-||  ..+|..     +..++.   ... .--.++... +|.+.++.-..++|.
T Consensus       161 Ngl~Wd~d~K---~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~ng~~V~  236 (310)
T KOG4499|consen  161 NGLAWDSDAK---KFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFNGGTVQ  236 (310)
T ss_pred             ccccccccCc---EEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEecCcEEE
Confidence            3456776553   4566666777887787  555542     222321   111 123455555 788888888889999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      -.|..+|+.+..+   .-....|++++|--
T Consensus       237 ~~dp~tGK~L~ei---klPt~qitsccFgG  263 (310)
T KOG4499|consen  237 KVDPTTGKILLEI---KLPTPQITSCCFGG  263 (310)
T ss_pred             EECCCCCcEEEEE---EcCCCceEEEEecC
Confidence            9999999999988   56688999999963

>KOG2247|consensus

Probab=95.18  E-value=0.0027  Score=51.20  Aligned_cols=144  Identities=10%  Similarity=0.196  Sum_probs=98.2

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceee
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      ...|-|.+.    -++.++.+..+..||-. ++.+.... .++....++|.. +++.+ +.+-..+.+.+||+.+... .
T Consensus        39 ~~~w~~e~~----nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDk-egdvlavlAek~~piylwd~n~eyt-q  110 (615)
T KOG2247|consen   39 IHRWRPEGH----NLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDK-EGDVLAVLAEKTGPIYLWDVNSEYT-Q  110 (615)
T ss_pred             eeeEecCCC----ceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhcc-ccchhhhhhhcCCCeeechhhhhhH-H
Confidence            345667663    58888888899999854 55444443 456678899988 55544 4456678899999975422 2


Q ss_pred             eeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         94 IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                      .+..-..+....  +.|++-...++.+...|.+.+++..+.+.+...-+                            |..
T Consensus       111 qLE~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gk----------------------------h~R  160 (615)
T KOG2247|consen  111 QLESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGK----------------------------HQR  160 (615)
T ss_pred             HHhccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcc----------------------------ccc
Confidence            221111233333  78999888999998999999999887765543321                            777


Q ss_pred             ceeEEEEc-CCEEEEecCCCeEEE
Q psy10348        174 YVDCVRWL-GDFVLSKSCENCIIC  196 (291)
Q Consensus       174 ~v~~~~~~-~~~l~~~~~d~~i~i  196 (291)
                      ++.++++. .++.+.++.|..+.+
T Consensus       161 Rgtq~av~lEd~vil~dcd~~L~v  184 (615)
T KOG2247|consen  161 RGTQIAVTLEDYVILCDCDNTLSV  184 (615)
T ss_pred             ceeEEEecccceeeecCcHHHHHH
Confidence            88888888 777777777765544

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.16  E-value=1.5  Score=36.04  Aligned_cols=108  Identities=13%  Similarity=0.136  Sum_probs=67.4

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEE---EccC-----CcceeEEEe---eec--cceeEEEEecC----------CCcE
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRI---FSPA-----FHACVRHFY---GHG--HAINELKFHPQ----------DFNL   71 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~v---w~~~-----~~~~~~~~~---~~~--~~v~~~~~~~~----------~~~~   71 (291)
                      .++.+|++    .+||.+..+..+.+   |+..     .+.......   .++  +.|+++.|-|-          |...
T Consensus         6 ~isls~~~----d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~   81 (415)
T PF14655_consen    6 SISLSPDG----DLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTC   81 (415)
T ss_pred             eEEecCCC----CEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEE
Confidence            45677887    49999887776665   5331     111111111   111  46777777552          4578


Q ss_pred             EEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC---------CEEEEEecCCcEEEEec
Q psy10348         72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG---------TKIMSCGMDHSLKLWDL  131 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~l~~~~~d~~i~v~d~  131 (291)
                      ++.|..+|.|++|.. +|..+..-   .-|..+|..+......         .-|..-.. +.|.+.|-
T Consensus        82 I~VG~ssG~vrfyte-~G~LL~~Q---~~h~~pV~~ik~~~~~~~~~~~~~~eel~ily~-~~v~~Idg  145 (415)
T PF14655_consen   82 IAVGTSSGYVRFYTE-NGVLLLSQ---LLHEEPVLKIKCRSTKIPRHPGDSSEELSILYP-SAVVIIDG  145 (415)
T ss_pred             EEEEecccEEEEEec-cchHHHHH---hcCccceEEEEecccCCCCCCcccccEEEEEEC-CEEEEEec
Confidence            999999999999986 46655443   4689999998885421         33444443 55666663

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.92  E-value=0.45  Score=35.35  Aligned_cols=67  Identities=13%  Similarity=0.166  Sum_probs=49.3

Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeee----cccc-------CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIF----GGVE-------GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~-------~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      ++++|++-..+|.+++||+.+++.+..-    .-+.       .....|..+..+.+|.-+++-+ +|..+.|+..-+.
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~   98 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGC   98 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccccce
Confidence            5578888899999999999987654321    0012       3567889999998888777655 5788999876554

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=94.81  E-value=1.4  Score=33.75  Aligned_cols=112  Identities=13%  Similarity=0.050  Sum_probs=67.4

Q ss_pred             eeEEEEeeeccCCCCCEEEEec---CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE-CC
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAG---SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN-IK   87 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd-~~   87 (291)
                      .+.+.+.+++++    .+|...   ....++++...  .....+. -...+..-.|.+ ++...+....+...+++. ..
T Consensus        25 ~~~s~AvS~dg~----~~A~v~~~~~~~~L~~~~~~--~~~~~~~-~g~~l~~PS~d~-~g~~W~v~~~~~~~~~~~~~~   96 (253)
T PF10647_consen   25 DVTSPAVSPDGS----RVAAVSEGDGGRSLYVGPAG--GPVRPVL-TGGSLTRPSWDP-DGWVWTVDDGSGGVRVVRDSA   96 (253)
T ss_pred             cccceEECCCCC----eEEEEEEcCCCCEEEEEcCC--Ccceeec-cCCccccccccC-CCCEEEEEcCCCceEEEEecC
Confidence            678889999985    454443   33456665543  3233322 224778889999 677777766666666663 33


Q ss_pred             Ccceee-eeccccCCCCceEEEEEccCCCEEEEEe---cCCcEEEEecc
Q psy10348         88 TDICIA-IFGGVEGHRDEVLSADFDLLGTKIMSCG---MDHSLKLWDLT  132 (291)
Q Consensus        88 ~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~v~d~~  132 (291)
                      .+.... .+.. ..-...|..+.++|||..++...   .++.|.+--+.
T Consensus        97 ~g~~~~~~v~~-~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~  144 (253)
T PF10647_consen   97 SGTGEPVEVDW-PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV  144 (253)
T ss_pred             CCcceeEEecc-cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence            333221 1210 11222899999999999877665   35667776554

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG1983|consensus

Probab=94.79  E-value=1.4  Score=40.83  Aligned_cols=215  Identities=13%  Similarity=0.045  Sum_probs=102.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ....++|.|..    .++|.+..+|.|+++....-+......... ..+..+.+-. ..........+..+.+|......
T Consensus        37 ~~~~~afD~~q----~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~-~~s~~~~l~~~~~~~~~~~~~~~  111 (993)
T KOG1983|consen   37 TPSALAFDPTQ----GLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLV-GISRNLVLSDDDSLHLWSIKIKT  111 (993)
T ss_pred             CCcceeecccc----ceEEEEEecccEEEecccceEEEeccccccchhhhheeeee-cccccceeecccceeeecccccc
Confidence            34567888887    599999999999999865333222111100 0122222222 11222333344555566544222


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCC--------CCccccccCcc---
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP--------ARSTRPFDTQK---  159 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---  159 (291)
                      .+       .....+.+....+--.+ +-+ ..+.+++||..-...............        ......+....   
T Consensus       112 ~~-------~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  182 (993)
T KOG1983|consen  112 GV-------FLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLDT  182 (993)
T ss_pred             ee-------ecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeecccccccc
Confidence            11       12233333333222223 444 778888887653332221111110000        00000000000   


Q ss_pred             --ccCc-ccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        160 --EHFP-QFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       160 --~~~~-~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                        ...+ .......+...+.+..+. ...+..+...+.+-+|+......            ...+.......       .
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-------~  243 (993)
T KOG1983|consen  183 VLISLPDAYLGLSLIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYV------------QSAYLPNGQLE-------S  243 (993)
T ss_pred             ceeecccccccccccccccceeeeecCCCcceeeeeeeeeehhcccccc------------hhhcccccccC-------c
Confidence              0000 002233355556666655 44455555667777776544322            12222111111       4


Q ss_pred             CCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        236 YWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      +++..++++..||.+.+||...++
T Consensus       244 ~~~~~~v~~h~Dgs~~fWd~s~g~  267 (993)
T KOG1983|consen  244 RDGSHFVSYHTDGSYAFWDVSSGK  267 (993)
T ss_pred             cCCceEEEEEecCCEEeeecCCCc
Confidence            669999999999999999999874

>KOG1916|consensus

Probab=94.67  E-value=0.047  Score=47.85  Aligned_cols=93  Identities=15%  Similarity=0.164  Sum_probs=59.9

Q ss_pred             CeEEEEccC--CcceeEEEee-----eccceeEEEEecC--CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         36 AVIRIFSPA--FHACVRHFYG-----HGHAINELKFHPQ--DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        36 g~i~vw~~~--~~~~~~~~~~-----~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      |.+.||+++  .|+....+.-     -...+.-+.|.|-  +..++..+-.++.+++..+.+... ..+   .+|...+.
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~---rsHs~~~~  228 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLF---RSHSQRVT  228 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHH---HhcCCCcc
Confidence            678888875  3443333322     2234455556541  446677777888888877764332 333   45766665


Q ss_pred             EEE-----------EccCCCEEEEEecCCcEEEEecc
Q psy10348        107 SAD-----------FDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus       107 ~~~-----------~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      .++           .+|||..|+.++.||.++.|.+.
T Consensus       229 d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  229 DMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             cHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            544           58999999999999999988764

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=94.63  E-value=1.6  Score=33.67  Aligned_cols=158  Identities=11%  Similarity=0.018  Sum_probs=91.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .+-+..+.++.+      +...+..+.-++|.|+.+......+.  .-.+--.++..   .|++...+..|.-+.+.|+.
T Consensus        86 ~~l~~Dv~vse~------yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v---sGn~aYVadlddgfLivdvs  156 (370)
T COG5276          86 RDLFADVRVSEE------YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV---SGNYAYVADLDDGFLIVDVS  156 (370)
T ss_pred             hhhhheeEeccc------EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe---cCCEEEEeeccCcEEEEECC
Confidence            344455555543      67777778889999987654332221  11133333333   55788887766667788887


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +.+..............-..++.+  |++-..+..|+-+.+.|+....... +..+..                      
T Consensus       157 dpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPv-li~~~n----------------------  211 (370)
T COG5276         157 DPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPV-LIGSYN----------------------  211 (370)
T ss_pred             CCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCe-EEEEEe----------------------
Confidence            654433222223334444566665  7788888899999999997765321 111111                      


Q ss_pred             ccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCc
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                         ....+.++..++++.+..-.+.-+.+-|......
T Consensus       212 ---~g~g~~sv~vsdnr~y~vvy~egvlivd~s~~ss  245 (370)
T COG5276         212 ---TGPGTYSVSVSDNRAYLVVYDEGVLIVDVSGPSS  245 (370)
T ss_pred             ---cCCceEEEEecCCeeEEEEcccceEEEecCCCCC
Confidence               1224566666666555555555666666665543

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.46  E-value=1.3  Score=32.18  Aligned_cols=104  Identities=13%  Similarity=0.010  Sum_probs=61.0

Q ss_pred             CCcEEEEeecC--CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhcccc
Q psy10348         68 DFNLLLSVSKD--HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        68 ~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                      ++.++.+.+.-  ..|++||+.+|+.+.... +.  ...+..=-...-+..+..- =.+|.-..+|.++.+.+..+.   
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~-l~--~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~---  128 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEK-LA--PDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS---  128 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEee-cC--CccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc---
Confidence            55777776543  459999999998776542 11  1122111111123333332 347888899999888776553   


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCC
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                                                .++.=..++.++..|+.+....+++.-|..+..
T Consensus       129 --------------------------y~GeGWgLt~d~~~LimsdGsatL~frdP~tfa  161 (262)
T COG3823         129 --------------------------YEGEGWGLTSDDKNLIMSDGSATLQFRDPKTFA  161 (262)
T ss_pred             --------------------------cCCcceeeecCCcceEeeCCceEEEecCHHHhh
Confidence                                      334445666666656666666777777765543

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=94.39  E-value=1.7  Score=33.12  Aligned_cols=112  Identities=16%  Similarity=0.097  Sum_probs=75.4

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ++|.+.....-+.++-.||+.    .-+++...|.|--.|..+|+..+.--+....-..+..-| ++..-++-+.. -|.
T Consensus        54 ~~fpvp~G~ap~dvapapdG~----VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gp-dg~~Witd~~~-aI~  127 (353)
T COG4257          54 AEFPVPNGSAPFDVAPAPDGA----VWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGP-DGSAWITDTGL-AIG  127 (353)
T ss_pred             ceeccCCCCCccccccCCCCc----eEEecCccccceecCCCCCceEEEecCCCCCCceEEECC-CCCeeEecCcc-eeE
Confidence            345556666777788888884    888888889999999999987665555555566777888 66666654333 455


Q ss_pred             EEECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEe
Q psy10348         83 LWNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        83 vwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      -.|-++.+.. .+. ....-........|.+.|++-+++.
T Consensus       128 R~dpkt~evt-~f~lp~~~a~~nlet~vfD~~G~lWFt~q  166 (353)
T COG4257         128 RLDPKTLEVT-RFPLPLEHADANLETAVFDPWGNLWFTGQ  166 (353)
T ss_pred             EecCcccceE-EeecccccCCCcccceeeCCCccEEEeec
Confidence            5565554432 221 1123455678888999999888875

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.23  E-value=1.9  Score=33.06  Aligned_cols=107  Identities=13%  Similarity=0.129  Sum_probs=67.0

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCe-EEEEccCCcceeEEEeeeccc--eeEEEEecCCCcEEEEeec-----CCeEEEEE
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAV-IRIFSPAFHACVRHFYGHGHA--INELKFHPQDFNLLLSVSK-----DHTLRLWN   85 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~-i~vw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~-----dg~i~vwd   85 (291)
                      ..++|+|...   .-++.+-.-|+ ..++|.++.+....+...++.  --.=.|+| +|.+|...-.     .|.|-|||
T Consensus        71 Hgi~~~p~~~---ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~-dG~~LYATEndfd~~rGViGvYd  146 (366)
T COG3490          71 HGIAFHPALP---RAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSP-DGRLLYATENDFDPNRGVIGVYD  146 (366)
T ss_pred             CCeecCCCCc---ceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCC-CCcEEEeecCCCCCCCceEEEEe
Confidence            3456666653   34444444443 567787776655544322211  01125899 8898887533     37799999


Q ss_pred             CCCc-ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEE
Q psy10348         86 IKTD-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW  129 (291)
Q Consensus        86 ~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~  129 (291)
                      .+.+ +.+..+   ..|.-....+.|.+||+.++.+.  |-|..-
T Consensus       147 ~r~~fqrvgE~---~t~GiGpHev~lm~DGrtlvvan--GGIeth  186 (366)
T COG3490         147 AREGFQRVGEF---STHGIGPHEVTLMADGRTLVVAN--GGIETH  186 (366)
T ss_pred             cccccceeccc---ccCCcCcceeEEecCCcEEEEeC--Cceecc
Confidence            8743 233344   67888888999999999998874  445544

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=94.05  E-value=0.45  Score=33.91  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=26.6

Q ss_pred             CCceEEEEEccCC------CEEEEEecCCcEEEEeccCc
Q psy10348        102 RDEVLSADFDLLG------TKIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus       102 ~~~i~~~~~~~~~------~~l~~~~~d~~i~v~d~~~~  134 (291)
                      ...+..++|||.|      -.|++-+.++.|.+|.....
T Consensus        85 ~~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~  123 (173)
T PF12657_consen   85 SSQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGN  123 (173)
T ss_pred             cccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCC
Confidence            3488999999964      27888889999999987643

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.89  E-value=0.7  Score=34.38  Aligned_cols=81  Identities=12%  Similarity=0.186  Sum_probs=48.5

Q ss_pred             cceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee--ec--CCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        173 NYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR--LN--FKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       173 ~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      .++..+...++++++-+.+|.+++||+.+.+.......-.  ..+..  ..  .....|.  .+..+.+|.-+++-+ +|
T Consensus        13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~--pll~~~~~~~~~~~~~i~--~~~lt~~G~PiV~ls-ng   87 (219)
T PF07569_consen   13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIA--PLLNSSPVSDKSSSPNIT--SCSLTSNGVPIVTLS-NG   87 (219)
T ss_pred             CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHH--HHhcccccccCCCCCcEE--EEEEcCCCCEEEEEe-CC
Confidence            3455677679999999999999999999876541110000  00000  00  2233343  444445577666654 57


Q ss_pred             cEEEEEcCCC
Q psy10348        249 RTYVWDLDVQ  258 (291)
Q Consensus       249 ~i~vwd~~~~  258 (291)
                      ..+.|+..-+
T Consensus        88 ~~y~y~~~L~   97 (219)
T PF07569_consen   88 DSYSYSPDLG   97 (219)
T ss_pred             CEEEeccccc
Confidence            8899987754

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=93.83  E-value=1.3  Score=29.69  Aligned_cols=103  Identities=17%  Similarity=0.195  Sum_probs=66.6

Q ss_pred             CEEEEecCCCeEEEEccCCc--------ceeEEEeeeccceeEEEEec----CCCcEEEEeecCCeEEEEECCCcceeee
Q psy10348         27 PLLAVAGSRAVIRIFSPAFH--------ACVRHFYGHGHAINELKFHP----QDFNLLLSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v~~~~~~~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                      +.|+.++.-|+|.|.+....        ..++.+. -...|++|+-.+    .+.+.|+.|+. ..+..||+.....+..
T Consensus        11 pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~N~d~Fy   88 (136)
T PF14781_consen   11 PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENNSDLFY   88 (136)
T ss_pred             eeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcccCchhhh
Confidence            58888888999999987633        2334443 456788876654    23567777765 5699999987665443


Q ss_pred             eccccCCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCch
Q psy10348         95 FGGVEGHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                          +.-.+.|.++.+-.-   ..-++..+.+..|.-||.+..+
T Consensus        89 ----ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e  128 (136)
T PF14781_consen   89 ----KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNE  128 (136)
T ss_pred             ----hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcE
Confidence                345577777776331   2234444446778888765544

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=93.78  E-value=1.9  Score=35.28  Aligned_cols=101  Identities=5%  Similarity=0.012  Sum_probs=53.4

Q ss_pred             CCeEEEEccCCcceeEEEeeec--cceeEEEEec--CCCcEEEEeecCCeEEEEEC-CCcc----eeeeecc-------c
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHG--HAINELKFHP--QDFNLLLSVSKDHTLRLWNI-KTDI----CIAIFGG-------V   98 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~l~s~~~dg~i~vwd~-~~~~----~~~~~~~-------~   98 (291)
                      ...+.+||..+.+.++++.--.  .....+.|..  ....-++.+....+|..|-- +.++    .+..+..       +
T Consensus       221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~l  300 (461)
T PF05694_consen  221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWIL  300 (461)
T ss_dssp             --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS--
T ss_pred             cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccc
Confidence            3689999999999999987432  2456677754  22233444444555555533 3332    1111110       0


Q ss_pred             -------cCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCch
Q psy10348         99 -------EGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPE  135 (291)
Q Consensus        99 -------~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~  135 (291)
                             ..-..-|+.+..|.|.++|+.+.. +|.|+.||+....
T Consensus       301 p~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~  345 (461)
T PF05694_consen  301 PEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF  345 (461)
T ss_dssp             -GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred             cccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence                   001345789999999999988776 9999999998754

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=93.64  E-value=3.7  Score=34.39  Aligned_cols=138  Identities=12%  Similarity=0.101  Sum_probs=80.0

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCC------CcEEEEeecCCeEEEEECCC-cceeeeeccccC
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD------FNLLLSVSKDHTLRLWNIKT-DICIAIFGGVEG  100 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~  100 (291)
                      ++..|+....++-.|++.|+.+.....|...  -+.|.|..      ...-+.|-.+..|.-.|.+. |..+...    .
T Consensus       482 i~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~----e  555 (776)
T COG5167         482 IYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVV----E  555 (776)
T ss_pred             EEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeee----e
Confidence            4455666678888899999999988877664  57787721      12233444455555556553 3333322    2


Q ss_pred             CCCceEEEEEc----cCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCccee
Q psy10348        101 HRDEVLSADFD----LLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVD  176 (291)
Q Consensus       101 ~~~~i~~~~~~----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  176 (291)
                      .....+--.|+    ..+.+++.|+..|-|++||--.-.....++                            +-...|.
T Consensus       556 sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP----------------------------~lG~aIk  607 (776)
T COG5167         556 SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALP----------------------------GLGDAIK  607 (776)
T ss_pred             ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCc----------------------------cccccee
Confidence            22333322332    245599999999999999954332221111                            2334455


Q ss_pred             EEEEc--CCEEEEecCCCeEEEecCC
Q psy10348        177 CVRWL--GDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       177 ~~~~~--~~~l~~~~~d~~i~iwd~~  200 (291)
                      .+...  |+++++.+ ...+.+-|++
T Consensus       608 ~idvta~Gk~ilaTC-k~yllL~d~~  632 (776)
T COG5167         608 HIDVTANGKHILATC-KNYLLLTDVP  632 (776)
T ss_pred             eeEeecCCcEEEEee-cceEEEEecc
Confidence            55554  66666544 5677777764

>KOG1916|consensus

Probab=93.45  E-value=0.1  Score=45.88  Aligned_cols=119  Identities=12%  Similarity=0.152  Sum_probs=72.3

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEE-----------EecCCCcEEEEeecCCeE
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELK-----------FHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~-----------~~~~~~~~l~s~~~dg~i   81 (291)
                      +.-+.|+|--- +.-++..+..++.|++.+.++... ..+.+|...+..++           .+| ||..++.++.||.+
T Consensus       183 ~~~V~wcp~~~-~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSp-DGtv~a~a~~dG~v  259 (1283)
T KOG1916|consen  183 PQLVSWCPIAV-NKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSP-DGTVFAWAISDGSV  259 (1283)
T ss_pred             cceeeeccccc-ccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCC-CCcEEEEeecCCcc
Confidence            35566666432 114788888889999887764332 33445765555544           467 88899999999988


Q ss_pred             EEEECC-Cc----ceeeeeccccCCC-CceEEEEEccCC---------CEEEEEec-CCcEEEEeccCchhh
Q psy10348         82 RLWNIK-TD----ICIAIFGGVEGHR-DEVLSADFDLLG---------TKIMSCGM-DHSLKLWDLTKPEIK  137 (291)
Q Consensus        82 ~vwd~~-~~----~~~~~~~~~~~~~-~~i~~~~~~~~~---------~~l~~~~~-d~~i~v~d~~~~~~~  137 (291)
                      +.|.+. +|    ++....   +.|+ .+-.|..++.+.         .++++++. ...+++|.....++.
T Consensus       260 ~f~Qiyi~g~~~~rclhew---kphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  260 GFYQIYITGKIVHRCLHEW---KPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL  328 (1283)
T ss_pred             ceeeeeeeccccHhhhhcc---CCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence            888753 22    233333   5565 333333344322         24455544 667999998877766

>KOG2247|consensus

Probab=93.40  E-value=0.013  Score=47.45  Aligned_cols=108  Identities=15%  Similarity=0.182  Sum_probs=74.8

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      .+....++|..++.   ..++.+-..+.+.+||+.+... +++. +-...-.-+.|++ ....++.+...|.+.|++..+
T Consensus        74 tg~aldm~wDkegd---vlavlAek~~piylwd~n~eyt-qqLE~gg~~s~sll~wsK-g~~el~ig~~~gn~viynhgt  148 (615)
T KOG2247|consen   74 TGKALDMAWDKEGD---VLAVLAEKTGPIYLWDVNSEYT-QQLESGGTSSKSLLAWSK-GTPELVIGNNAGNIVIYNHGT  148 (615)
T ss_pred             chhHhhhhhccccc---hhhhhhhcCCCeeechhhhhhH-HHHhccCcchHHHHhhcc-CCccccccccccceEEEeccc
Confidence            34445667777664   5666677889999999975432 2222 1112222378999 888889999999999999988


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcE
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL  126 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  126 (291)
                      .+.+...   ..|...+.+++|.+.+.. +.++.|..+
T Consensus       149 sR~iiv~---Gkh~RRgtq~av~lEd~v-il~dcd~~L  182 (615)
T KOG2247|consen  149 SRRIIVM---GKHQRRGTQIAVTLEDYV-ILCDCDNTL  182 (615)
T ss_pred             hhhhhhh---cccccceeEEEeccccee-eecCcHHHH
Confidence            8777766   459999999999987754 444444433

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=93.13  E-value=5.1  Score=34.44  Aligned_cols=102  Identities=14%  Similarity=0.126  Sum_probs=64.4

Q ss_pred             CCeEEEEccCCcceeEEEeeecc-------------------------------cee-EEEEecCCCcEEEEeec-----
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGH-------------------------------AIN-ELKFHPQDFNLLLSVSK-----   77 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~-------------------------------~v~-~~~~~~~~~~~l~s~~~-----   77 (291)
                      +|.|.-+|.++|+.+..+..-..                               .+. .+.+.| ...+++.+..     
T Consensus       180 ~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~-~~~lvy~~tGnp~p~  258 (527)
T TIGR03075       180 RGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDP-ETNLIYFGTGNPSPW  258 (527)
T ss_pred             CcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcC-CCCeEEEeCCCCCCC
Confidence            68999999999998766532110                               111 235555 3445555431     


Q ss_pred             CC-----------eEEEEECCCcceeeeeccccCCCC-------ceEEEEEccCCC---EEEEEecCCcEEEEeccCchh
Q psy10348         78 DH-----------TLRLWNIKTDICIAIFGGVEGHRD-------EVLSADFDLLGT---KIMSCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus        78 dg-----------~i~vwd~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~  136 (291)
                      ++           .|.-.|+++|+....++. ..|..       ...-+....+|+   .++.+.++|.+.+.|.++++.
T Consensus       259 ~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~-~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~  337 (527)
T TIGR03075       259 NSHLRPGDNLYTSSIVARDPDTGKIKWHYQT-TPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL  337 (527)
T ss_pred             CCCCCCCCCccceeEEEEccccCCEEEeeeC-CCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence            12           577778999998887743 12321       112223334665   778899999999999999987


Q ss_pred             hh
Q psy10348        137 KD  138 (291)
Q Consensus       137 ~~  138 (291)
                      +.
T Consensus       338 i~  339 (527)
T TIGR03075       338 LS  339 (527)
T ss_pred             ec
Confidence            63

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=93.10  E-value=6.5  Score=35.48  Aligned_cols=72  Identities=10%  Similarity=0.001  Sum_probs=48.6

Q ss_pred             cEEEEeecCCeEEEEECCCcceeeeeccccCCCC-----ceEEEEEcc----------------CCCEEEEEecCCcEEE
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD-----EVLSADFDL----------------LGTKIMSCGMDHSLKL  128 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~i~~~~~~~----------------~~~~l~~~~~d~~i~v  128 (291)
                      ..++.++.++.|.-.|..+|+.+..+..-.....     ..+.+.+-.                .+..++.++.|+.+.-
T Consensus       195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiA  274 (764)
T TIGR03074       195 DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIA  274 (764)
T ss_pred             CEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEE
Confidence            5677778889999999999998887732111010     112233311                2347888889999999


Q ss_pred             EeccCchhhhhhc
Q psy10348        129 WDLTKPEIKDACA  141 (291)
Q Consensus       129 ~d~~~~~~~~~~~  141 (291)
                      .|.++++....+.
T Consensus       275 LDA~TGk~~W~fg  287 (764)
T TIGR03074       275 LDADTGKLCEDFG  287 (764)
T ss_pred             EECCCCCEEEEec
Confidence            9999999776543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=92.80  E-value=6.6  Score=34.76  Aligned_cols=108  Identities=8%  Similarity=0.140  Sum_probs=60.1

Q ss_pred             eeEEEEc----CCEEEEecCCCeEEEecCCCCCccccc--------cCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        175 VDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELR--------TNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       175 v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                      |+-+...    ...|+.+..||.|.+|.+.........        ......++...+.. ...+|.+++.-....++||
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-GASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-CCceeEEEEEecCcceEEE
Confidence            5555443    448899999999999976332110000        00011122222222 2356777765335578999


Q ss_pred             EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        243 VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                      +++....|.||-........   .......+...|.+|+|-++.
T Consensus       182 VSsNs~~VTVFaf~l~~~r~---~~~~s~~~~hNIP~VSFl~~~  222 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDERF---YHVPSHQHSHNIPNVSFLDDD  222 (717)
T ss_pred             EecCCceEEEEEEecccccc---ccccccccccCCCeeEeecCC
Confidence            99999999998876632110   111111244577888887754

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=92.73  E-value=3.5  Score=31.51  Aligned_cols=62  Identities=16%  Similarity=0.115  Sum_probs=36.8

Q ss_pred             EEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCCC-c-ceeEEEec-cccccceeeeEEccCCceee
Q psy10348        229 FIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDPS-S-IKFQILSH-PRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~-~-~~~~~~~~-~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +..+.++|||..+|.-.   .++.|.+=-+.....- . .+...+.. ......+.+++|.+++.+++
T Consensus       114 I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V  181 (253)
T PF10647_consen  114 ITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV  181 (253)
T ss_pred             eEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence            34555667799887765   4577777766533221 1 11111111 12346889999999998775

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=92.73  E-value=3.8  Score=31.90  Aligned_cols=240  Identities=10%  Similarity=0.112  Sum_probs=119.7

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccC------Ccc-eeEEEee-----eccceeEEEEecCCC------------
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPA------FHA-CVRHFYG-----HGHAINELKFHPQDF------------   69 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~------~~~-~~~~~~~-----~~~~v~~~~~~~~~~------------   69 (291)
                      +.++++|.+    .+-++....+...+||..      ..+ ++-.+..     .....+.+.|+. ..            
T Consensus        26 WGia~~p~~----~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~-~~~F~vt~~g~~~~  100 (336)
T TIGR03118        26 WGLSYRPGG----PFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNG-SDTFVVSGEGITGP  100 (336)
T ss_pred             ceeEecCCC----CEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeC-CCceEEcCCCcccc
Confidence            567888877    577777888999999986      122 2223321     124577888875 22            


Q ss_pred             cEEEEeecCCeEEEEECCCcce-----eeeeccccCCCCce-EEEEEccC--CCEEEEEe-cCCcEEEEeccCchhhhhh
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDIC-----IAIFGGVEGHRDEV-LSADFDLL--GTKIMSCG-MDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~i-~~~~~~~~--~~~l~~~~-~d~~i~v~d~~~~~~~~~~  140 (291)
                      ..++.+++||+|.-|...-+..     ...+.  ......| ..+++...  +.+|+.+. ..++|.+||-.-.+..  +
T Consensus       101 a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d--~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~--~  176 (336)
T TIGR03118       101 SRFLFVTEDGTLSGWAPALGTTRMTRAEIVVD--ASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPP--L  176 (336)
T ss_pred             eeEEEEeCCceEEeecCcCCcccccccEEEEc--cCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcccccc--C
Confidence            2367778999999998543322     12221  1222333 34555433  45665554 4788998885433221  0


Q ss_pred             ccccccCCCCccccccCccccCccccccc-ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeee
Q psy10348        141 AESYTFNPARSTRPFDTQKEHFPQFSTRD-IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      ...+ ..|.        +...+..+.... +..-.|+-..-+  .+.=+.|..-|.|.+||+...             .+
T Consensus       177 ~g~F-~DP~--------iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~-------------l~  234 (336)
T TIGR03118       177 PGSF-IDPA--------LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQ-------------LL  234 (336)
T ss_pred             CCCc-cCCC--------CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCc-------------EE
Confidence            0000 0000        000000000000 000000000001  112233444578899987653             24


Q ss_pred             eeec--CCcccEEEEEEEec----CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc
Q psy10348        218 NRLN--FKDCEIWFIRFSMD----YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK  284 (291)
Q Consensus       218 ~~~~--~~~~~i~~~~~~~~----~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  284 (291)
                      +++.  +.-..-|.++.+|.    ..+.+|+---.||+|..||..+++.+..+......+--....+.|+|-.
T Consensus       235 ~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       235 RRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             EEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence            4442  22344566666552    2366676666899999999998864332221111111123456677755

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PLN02153 epithiospecifier protein

Probab=92.49  E-value=4.7  Score=32.39  Aligned_cols=62  Identities=11%  Similarity=0.110  Sum_probs=32.2

Q ss_pred             CEEEEecCC-------CeEEEEccCCcceeEEEeeec---c-ce--eEEEEecCCCcEEEEeecC-----CeEEEEECCC
Q psy10348         27 PLLAVAGSR-------AVIRIFSPAFHACVRHFYGHG---H-AI--NELKFHPQDFNLLLSVSKD-----HTLRLWNIKT   88 (291)
Q Consensus        27 ~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~~---~-~v--~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~   88 (291)
                      .+++.|+.+       ..+.+||+.+.+-.. +....   . ..  .+++..  ++.+++.|+.+     ..+.+||+.+
T Consensus        34 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t  110 (341)
T PLN02153         34 KLYSFGGELKPNEHIDKDLYVFDFNTHTWSI-APANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTVK  110 (341)
T ss_pred             EEEEECCccCCCCceeCcEEEEECCCCEEEE-cCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECCC
Confidence            477777653       357788877654321 11110   0 00  112222  45677777653     2477888876


Q ss_pred             cce
Q psy10348         89 DIC   91 (291)
Q Consensus        89 ~~~   91 (291)
                      .+.
T Consensus       111 ~~W  113 (341)
T PLN02153        111 NEW  113 (341)
T ss_pred             CEE
Confidence            554

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=92.49  E-value=4.9  Score=32.57  Aligned_cols=92  Identities=18%  Similarity=0.143  Sum_probs=45.6

Q ss_pred             EccCCcceeEEEeeeccc-----eeEEEEecCCCc-EEEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEEcc
Q psy10348         41 FSPAFHACVRHFYGHGHA-----INELKFHPQDFN-LLLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL  112 (291)
Q Consensus        41 w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~-~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~  112 (291)
                      -|..||..+..+......     -+.=+|.+ +|+ +|+.+..||  .+.+.|+.+++..+.-   .+.........++|
T Consensus        15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~-dG~kllF~s~~dg~~nly~lDL~t~~i~QLT---dg~g~~~~g~~~s~   90 (386)
T PF14583_consen   15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTD-DGRKLLFASDFDGNRNLYLLDLATGEITQLT---DGPGDNTFGGFLSP   90 (386)
T ss_dssp             E-TTT--EEEE-S-TTS-EE---TTS--B-T-TS-EEEEEE-TTSS-EEEEEETTT-EEEE------SS-B-TTT-EE-T
T ss_pred             eCCCCCceEEEecCCCCcccceeecCCCcCC-CCCEEEEEeccCCCcceEEEEcccCEEEECc---cCCCCCccceEEec
Confidence            366777777777533322     22335666 665 455555555  4667788887766654   22223333566778


Q ss_pred             CCCEEEEEecCCcEEEEeccCchh
Q psy10348        113 LGTKIMSCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus       113 ~~~~l~~~~~d~~i~v~d~~~~~~  136 (291)
                      +++.++-.-....|+-.|+++.+.
T Consensus        91 ~~~~~~Yv~~~~~l~~vdL~T~e~  114 (386)
T PF14583_consen   91 DDRALYYVKNGRSLRRVDLDTLEE  114 (386)
T ss_dssp             TSSEEEEEETTTEEEEEETTT--E
T ss_pred             CCCeEEEEECCCeEEEEECCcCcE
Confidence            888877666567899999988764

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=92.37  E-value=0.61  Score=40.22  Aligned_cols=73  Identities=15%  Similarity=0.139  Sum_probs=43.9

Q ss_pred             CCcEEEEeecCCeEEEEECCC----cceeeee-----------ccc--------cCCCCceEEEEEcc----CCCEEEEE
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKT----DICIAIF-----------GGV--------EGHRDEVLSADFDL----LGTKIMSC  120 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~----~~~~~~~-----------~~~--------~~~~~~i~~~~~~~----~~~~l~~~  120 (291)
                      ++..++.+..||.+.......    +......           ..+        .........++.+.    +..++++.
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl  236 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL  236 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence            556778888899888777654    2111111           000        01123455666666    66799999


Q ss_pred             ecCCcEEEEeccCchhhhhh
Q psy10348        121 GMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus       121 ~~d~~i~v~d~~~~~~~~~~  140 (291)
                      +.|+.+|+||+.+++++...
T Consensus       237 ~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  237 SRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             ETTSEEEEEETTTTCEEEEE
T ss_pred             eCCCeEEEEECCCCeEEEEe
Confidence            99999999999999985544

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=92.21  E-value=5.5  Score=32.46  Aligned_cols=104  Identities=16%  Similarity=0.124  Sum_probs=55.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEec-----------CCC-eEEEEccCC--cce--eEEEeeeccceeEEEEecCCCcEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAG-----------SRA-VIRIFSPAF--HAC--VRHFYGHGHAINELKFHPQDFNLLLS   74 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~-----------~dg-~i~vw~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s   74 (291)
                      .....++|.+++.    ++++-.           ..+ .|.+++-.+  |+.  ...+...-.....+++.+ ++ ++++
T Consensus        14 ~~P~~ia~d~~G~----l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV~   87 (367)
T TIGR02604        14 RNPIAVCFDERGR----LWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYVA   87 (367)
T ss_pred             CCCceeeECCCCC----EEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEEe
Confidence            4556789988883    555532           223 677776432  332  233433334568899998 77 5444


Q ss_pred             eecCCeEEEEECCCc-----ceeeeeccccC----CCCceEEEEEccCCCEEEEEe
Q psy10348         75 VSKDHTLRLWNIKTD-----ICIAIFGGVEG----HRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~-----~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~  121 (291)
                       ......++.|....     +....+..+..    +......++|.|+|.+.++-+
T Consensus        88 -~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        88 -TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             -CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence             44433334354321     21112211122    234577899999998666544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=92.20  E-value=5.8  Score=33.30  Aligned_cols=140  Identities=13%  Similarity=0.060  Sum_probs=80.8

Q ss_pred             CCcEEEE-eecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC--------CEEEEEecCCcEEEEeccCchhhh
Q psy10348         68 DFNLLLS-VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG--------TKIMSCGMDHSLKLWDLTKPEIKD  138 (291)
Q Consensus        68 ~~~~l~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~l~~~~~d~~i~v~d~~~~~~~~  138 (291)
                      +..+|+. |+....++--|++.|+.+...   .-|...  -+.|.|..        +.|+ |-.+..|.-.|.+.....-
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW---~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi  551 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEW---DLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKI  551 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEe---ecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCce
Confidence            5555544 555566777789999988887   445444  56777753        2344 4445556656665433110


Q ss_pred             hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc------CCEEEEecCCCeEEEecCCCCCccccccCCC
Q psy10348        139 ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL------GDFVLSKSCENCIICWKPGRLEDKELRTNET  212 (291)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  212 (291)
                      ....                            ...+++.-.|+      ..+++.++..|-|++||.-..+.        
T Consensus       552 ~v~e----------------------------sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rA--------  595 (776)
T COG5167         552 KVVE----------------------------SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRA--------  595 (776)
T ss_pred             eeee----------------------------ehhccccccccccccccCceEEEecCCCceeeehhhcchh--------
Confidence            0000                            11122222222      56999999999999999543322        


Q ss_pred             ceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        213 NVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       213 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                          -..+.+-...|..+....+  |+++++.+.. .+.+-|+.
T Consensus       596 ----KtalP~lG~aIk~idvta~--Gk~ilaTCk~-yllL~d~~  632 (776)
T COG5167         596 ----KTALPGLGDAIKHIDVTAN--GKHILATCKN-YLLLTDVP  632 (776)
T ss_pred             ----hhcCcccccceeeeEeecC--CcEEEEeecc-eEEEEecc
Confidence                2233444555666666544  8888777643 67777765

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=91.99  E-value=0.9  Score=39.19  Aligned_cols=69  Identities=22%  Similarity=0.343  Sum_probs=41.7

Q ss_pred             CEEEEecCCCeEEEEccCC----cceeEEE--eee--------------------ccceeEEEEec---CCCcEEEEeec
Q psy10348         27 PLLAVAGSRAVIRIFSPAF----HACVRHF--YGH--------------------GHAINELKFHP---QDFNLLLSVSK   77 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~----~~~~~~~--~~~--------------------~~~v~~~~~~~---~~~~~l~s~~~   77 (291)
                      ..++.+..||.+.......    +......  ..+                    ...+..++.+.   .+..++++.+.
T Consensus       159 ~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl~~  238 (547)
T PF11715_consen  159 ANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTLSR  238 (547)
T ss_dssp             SBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEEET
T ss_pred             CEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEEeC
Confidence            4788888899888887654    2111111  101                    12334444443   24578999999


Q ss_pred             CCeEEEEECCCcceeeee
Q psy10348         78 DHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~   95 (291)
                      |+++++||+.+++++...
T Consensus       239 D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  239 DHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             TSEEEEEETTTTCEEEEE
T ss_pred             CCeEEEEECCCCeEEEEe
Confidence            999999999999986654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>KOG4460|consensus

Probab=91.93  E-value=6.7  Score=33.06  Aligned_cols=27  Identities=15%  Similarity=0.142  Sum_probs=20.7

Q ss_pred             CceEEEEEccCCCEEEEEecCCcEEEE
Q psy10348        103 DEVLSADFDLLGTKIMSCGMDHSLKLW  129 (291)
Q Consensus       103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~  129 (291)
                      -.|..+..++.|..++-+|.+|.+.++
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMe  130 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVME  130 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEE
Confidence            356777889999999988888865544

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=91.80  E-value=0.9  Score=23.14  Aligned_cols=28  Identities=11%  Similarity=0.105  Sum_probs=21.1

Q ss_pred             CEEEE-ecCCCeEEEEccCCcceeEEEee
Q psy10348         27 PLLAV-AGSRAVIRIFSPAFHACVRHFYG   54 (291)
Q Consensus        27 ~~l~~-~~~dg~i~vw~~~~~~~~~~~~~   54 (291)
                      +.|++ ...++.|.++|..+++.+..+..
T Consensus         4 ~~lyv~~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         4 TKLYVTNSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             CEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence            44444 55688999999998888877764

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=91.65  E-value=6.4  Score=32.07  Aligned_cols=16  Identities=19%  Similarity=0.476  Sum_probs=12.6

Q ss_pred             ceeeeEEccCCceeeC
Q psy10348        276 AVRQTTLSKNGNVLLC  291 (291)
Q Consensus       276 ~v~~~~~s~~g~~l~s  291 (291)
                      ....++|+|+|+++++
T Consensus       185 np~Gl~~d~~G~l~~t  200 (367)
T TIGR02604       185 NPYGHSVDSWGDVFFC  200 (367)
T ss_pred             CCccceECCCCCEEEE
Confidence            4568999999988763

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=91.62  E-value=10  Score=34.36  Aligned_cols=80  Identities=13%  Similarity=0.025  Sum_probs=48.6

Q ss_pred             cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccc-cCCCceeeeeee-----cCCcccEEEEEEEecCCCcEEE
Q psy10348        171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELR-TNETNVTIINRL-----NFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                      ....|.++...  +..++..-.||+|.++|..+.+..... ........+...     ...... ....++++|++..++
T Consensus       258 ~~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~-~~~~vafSPt~c~~v  336 (753)
T PF11635_consen  258 LNKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQ-PPLHVAFSPTMCSLV  336 (753)
T ss_pred             cCCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCC-CCceEEECcccceEE
Confidence            34557777765  778899999999999999887654333 111111111111     111111 223355667799999


Q ss_pred             EEcCCCcEE
Q psy10348        243 VGNQSGRTY  251 (291)
Q Consensus       243 ~~~~dg~i~  251 (291)
                      .-..+|.+.
T Consensus       337 ~~~~~~~~~  345 (753)
T PF11635_consen  337 QIDEDGKTK  345 (753)
T ss_pred             EEecCCCce
Confidence            999898866

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=91.24  E-value=3.2  Score=27.89  Aligned_cols=105  Identities=11%  Similarity=-0.015  Sum_probs=65.3

Q ss_pred             EEEecCCCcEEEEeecCCeEEEEECCCc--------ceeeeeccccCCCCceEEEEEcc-----CCCEEEEEecCCcEEE
Q psy10348         62 LKFHPQDFNLLLSVSKDHTLRLWNIKTD--------ICIAIFGGVEGHRDEVLSADFDL-----LGTKIMSCGMDHSLKL  128 (291)
Q Consensus        62 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~d~~i~v  128 (291)
                      -.|.. ....|+.++.-|+|.|++....        ..+..+    .-...|++++-.+     ....|+.|+ ...+..
T Consensus         4 GkfDG-~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L----Nin~~italaaG~l~~~~~~D~LliGt-~t~lla   77 (136)
T PF14781_consen    4 GKFDG-VHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL----NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLA   77 (136)
T ss_pred             EEeCC-CceeEEEEecCCEEEEECCCccccccccccCceeEE----ECCCceEEEEEEecCCCCCcCEEEEec-cceEEE
Confidence            35555 4457888888899999987633        233443    4566777776543     234666666 567999


Q ss_pred             EeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc------CCEEEEecCCCeEEEecCCCC
Q psy10348        129 WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL------GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       129 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      ||+.....+....                             -...|.++.+-      ..++++| .+..|.-||....
T Consensus        78 YDV~~N~d~Fyke-----------------------------~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G~  127 (136)
T PF14781_consen   78 YDVENNSDLFYKE-----------------------------VPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEGN  127 (136)
T ss_pred             EEcccCchhhhhh-----------------------------CccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCCc
Confidence            9998766442211                             34557777663      3344444 4778888876543

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=91.22  E-value=6.7  Score=35.58  Aligned_cols=118  Identities=9%  Similarity=0.021  Sum_probs=77.8

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----eeEEEeeeccc----------eeEEEEecCCCcEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----CVRHFYGHGHA----------INELKFHPQDFNLLL   73 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~~----------v~~~~~~~~~~~~l~   73 (291)
                      ...+...++|+|...   ..||+....|...||++....     .+.....+.+.          -..+.|.+ +.+.|+
T Consensus       144 gg~~~aDv~FnP~~~---~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~-~~~~lL  219 (765)
T PF10214_consen  144 GGFPHADVAFNPWDQ---RQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVS-DSNRLL  219 (765)
T ss_pred             CCCccceEEeccCcc---ceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecC-CCCEEE
Confidence            356788999999876   699999999999999992111     11111111222          23678887 666777


Q ss_pred             EeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCc
Q psy10348         74 SVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        74 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~  134 (291)
                      .++. ..+.++|+++......+. .......|..+.-+|.  +..|+-.  ...|...++...
T Consensus       220 v~~r-~~l~~~d~~~~~~~~~l~-~~~~~~~IlDv~~~~~~~~~~FiLT--s~eiiw~~~~~~  278 (765)
T PF10214_consen  220 VCNR-SKLMLIDFESNWQTEYLV-TAKTWSWILDVKRSPDNPSHVFILT--SKEIIWLDVKSS  278 (765)
T ss_pred             EEcC-CceEEEECCCCCccchhc-cCCChhheeeEEecCCccceEEEEe--cCeEEEEEccCC
Confidence            7654 568999998776533121 1456678999999887  3333332  367888888764

These proteins are found in fungi.

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=91.11  E-value=8.7  Score=32.62  Aligned_cols=181  Identities=13%  Similarity=0.035  Sum_probs=78.8

Q ss_pred             eEEEEeeeccCCCCCEEEEe---cCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         13 FYTCAWSMDLESGRPLLAVA---GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~---~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +..+.-.+..-.++-+++..   ...+...+.|.+ |.....+.........+...+ +|.+++...  ..+..+|+. |
T Consensus       102 ~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~iD~~-G~Vrw~~~~~~~~~~~~~~l~-nG~ll~~~~--~~~~e~D~~-G  176 (477)
T PF05935_consen  102 VTVLKTSDEEMEDGLYFVNGNDWDSSSYTYLIDNN-GDVRWYLPLDSGSDNSFKQLP-NGNLLIGSG--NRLYEIDLL-G  176 (477)
T ss_dssp             EEEEE-E-TT-TT-EEEEEETT--BEEEEEEEETT-S-EEEEE-GGGT--SSEEE-T-TS-EEEEEB--TEEEEE-TT--
T ss_pred             eeEeeccccccCCcEEEEeCCCCCCCceEEEECCC-ccEEEEEccCccccceeeEcC-CCCEEEecC--CceEEEcCC-C
Confidence            33444344333344455555   355677788854 776665553322222266677 888777555  788899986 6


Q ss_pred             ceeeeeccccCCC-CceEEEEEccCCCEEEEEec-------------CCcEEEEeccCchhhhhhccccccCCCCccc--
Q psy10348         90 ICIAIFGGVEGHR-DEVLSADFDLLGTKIMSCGM-------------DHSLKLWDLTKPEIKDACAESYTFNPARSTR--  153 (291)
Q Consensus        90 ~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--  153 (291)
                      +.+.... +.... ..=..+...|+|++|+.+..             .-.|..+| .+++.+..+...--+.+.....  
T Consensus       177 ~v~~~~~-l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~  254 (477)
T PF05935_consen  177 KVIWEYD-LPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLK  254 (477)
T ss_dssp             -EEEEEE---TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGG
T ss_pred             CEEEeee-cCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccc
Confidence            6655542 12210 11245677899998887772             22366667 7777665544322222221100  


Q ss_pred             --cccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        154 --PFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       154 --~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                        ........     .....-.-++++.+.   +.+++++-.-..|...|.++++..
T Consensus       255 ~~~~~~~~~~-----~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~  306 (477)
T PF05935_consen  255 PYPYGDISGS-----GGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIK  306 (477)
T ss_dssp             T--SSSSS-S-----STTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EE
T ss_pred             cccccccccC-----CCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEE
Confidence              00000000     000011126777876   346666655668888886666443

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=91.07  E-value=4.6  Score=31.38  Aligned_cols=100  Identities=13%  Similarity=0.128  Sum_probs=60.6

Q ss_pred             CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee------cCCeEEEEECCCcceeeeeccc-cCCCCceEE
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS------KDHTLRLWNIKTDICIAIFGGV-EGHRDEVLS  107 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~-~~~~~~i~~  107 (291)
                      -..|++||..+.+-..--.+-.+.|++|.|.. +.++++.|.      ....+..||..+......-... ..-.++|..
T Consensus        15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~-~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a   93 (281)
T PF12768_consen   15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWAS-NNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTA   93 (281)
T ss_pred             CCEEEEEECCCCEeecCCCCceEEEEEEEEec-CCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEE
Confidence            46799999887665544445568899999986 667777774      3556889998866543221000 112477888


Q ss_pred             EEEcc-CCC-EEEEEe-c--CCcEEEEeccCch
Q psy10348        108 ADFDL-LGT-KIMSCG-M--DHSLKLWDLTKPE  135 (291)
Q Consensus       108 ~~~~~-~~~-~l~~~~-~--d~~i~v~d~~~~~  135 (291)
                      +.+.. ++. ..+.|. .  +..|..||=.+..
T Consensus        94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~  126 (281)
T PF12768_consen   94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSSWS  126 (281)
T ss_pred             EEeeccCCceEEEeceecCCCceEEEEcCCceE
Confidence            87743 333 333333 2  3346666644433

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=90.67  E-value=6.8  Score=30.64  Aligned_cols=199  Identities=12%  Similarity=0.079  Sum_probs=91.1

Q ss_pred             eEEEEECCCcceeeeecc---ccCCCCceEEEEEccCC-----CEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCC
Q psy10348         80 TLRLWNIKTDICIAIFGG---VEGHRDEVLSADFDLLG-----TKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPAR  150 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~-----~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~  150 (291)
                      +|.+||+.+++.++.+.-   .....+.+..+.+....     .+++.+. ..+.|.|+|+.+++..+.....+...|..
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~  114 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA  114 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred             EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence            688899999987776531   11235667888886632     2343333 35689999999988766655433333322


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                      ........     .+.    ....+..++..     ++.|+-....+ .+.--...................+..+ +..
T Consensus       115 ~~~~i~g~-----~~~----~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~~~~~v~~l-G~k  184 (287)
T PF03022_consen  115 GPFTIGGE-----SFQ----WPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQALASQVQDL-GDK  184 (287)
T ss_dssp             EEEEETTE-----EEE----ETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-HHHT-EEE-EE-
T ss_pred             cceeccCc-----eEe----cCCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCccccccccccccceec-ccc
Confidence            11111100     000    11114444443     12333222111 1111111000000000000000011111 111


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc--CCcee
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK--NGNVL  289 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~g~~l  289 (291)
                      . .....++.+++|.++++--..+.|..|+....-...........+..-..+.++++.+  +|.+.
T Consensus       185 ~-~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~  250 (287)
T PF03022_consen  185 G-SQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLW  250 (287)
T ss_dssp             ---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EE
T ss_pred             C-CCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEE
Confidence            0 1122355667799999999999999999887432222223333222245778899998  76654

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PRK10115 protease 2; Provisional

Probab=90.65  E-value=12  Score=33.48  Aligned_cols=110  Identities=13%  Similarity=0.016  Sum_probs=63.3

Q ss_pred             eEEEEeeeccCCCCCEEEEecC-----CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCc-EEEEeecC-----CeE
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGS-----RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN-LLLSVSKD-----HTL   81 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~d-----g~i   81 (291)
                      +..+.|||++    ++|+.+..     ...|++.|+.+|+.+...-....  ..++|.+ +++ ++++...+     ..|
T Consensus       129 l~~~~~Spdg----~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~-D~~~~~y~~~~~~~~~~~~v  201 (686)
T PRK10115        129 LGGMAITPDN----TIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWAN-DSWTFYYVRKHPVTLLPYQV  201 (686)
T ss_pred             EeEEEECCCC----CEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEee-CCCEEEEEEecCCCCCCCEE
Confidence            5567788887    47776532     24688999988864322211111  4589999 555 44444322     368


Q ss_pred             EEEECCCc--ceeeeeccccCCCCceE-EEEEccCCCEEEEEec---CCcEEEEecc
Q psy10348         82 RLWNIKTD--ICIAIFGGVEGHRDEVL-SADFDLLGTKIMSCGM---DHSLKLWDLT  132 (291)
Q Consensus        82 ~vwd~~~~--~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~---d~~i~v~d~~  132 (291)
                      ..+++.++  +....+   ........ .+..+.++++++..+.   ++.+.+++..
T Consensus       202 ~~h~lgt~~~~d~lv~---~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~  255 (686)
T PRK10115        202 WRHTIGTPASQDELVY---EEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE  255 (686)
T ss_pred             EEEECCCChhHCeEEE---eeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence            88888877  333444   22222233 3333447776654443   4578888853

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=90.61  E-value=12  Score=34.01  Aligned_cols=130  Identities=15%  Similarity=0.226  Sum_probs=80.5

Q ss_pred             eeeecceeEEEEee---eccCCCCCEEEEecCCCeEEEEccCCc---------------ceeEEEee---eccceeEEEE
Q psy10348          6 SLLIEENFYTCAWS---MDLESGRPLLAVAGSRAVIRIFSPAFH---------------ACVRHFYG---HGHAINELKF   64 (291)
Q Consensus         6 ~~~~~~~i~~~~~s---~~~~~~~~~l~~~~~dg~i~vw~~~~~---------------~~~~~~~~---~~~~v~~~~~   64 (291)
                      .+.-..+|..|+|+   ...+....+|++=.. ..+.|+...-.               .++..+..   -..+...++|
T Consensus        75 ~i~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~-~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~F  153 (765)
T PF10214_consen   75 SIDDGSPIKQIKFATLSESFDEKSRWLAVRTE-TSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAF  153 (765)
T ss_pred             EcCCCCCeeEEEecccccccCCcCcEEEEEcC-CEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEe
Confidence            34567899999998   332222246666544 46777762211               22333331   1347788999


Q ss_pred             ecCCCcEEEEeecCCeEEEEECCCcc-----eeeeeccccC-------CCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         65 HPQDFNLLLSVSKDHTLRLWNIKTDI-----CIAIFGGVEG-------HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        65 ~~~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      +|.+...||.....|...||++....     .........+       ....-..+.|.++.+.|+.++. ..+.++|++
T Consensus       154 nP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~~l~~~d~~  232 (765)
T PF10214_consen  154 NPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-SKLMLIDFE  232 (765)
T ss_pred             ccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-CceEEEECC
Confidence            99888899999999999999992111     1111100011       1123347889888788887774 668999998


Q ss_pred             Cchhh
Q psy10348        133 KPEIK  137 (291)
Q Consensus       133 ~~~~~  137 (291)
                      +....
T Consensus       233 ~~~~~  237 (765)
T PF10214_consen  233 SNWQT  237 (765)
T ss_pred             CCCcc
Confidence            77653

These proteins are found in fungi.

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=90.60  E-value=13  Score=33.72  Aligned_cols=61  Identities=11%  Similarity=0.098  Sum_probs=37.3

Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce----e-----EEEeccc----cccceeeeEEccCCceee
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK----F-----QILSHPR----CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~-----~~~~~~~----~~~~v~~~~~s~~g~~l~  290 (291)
                      +++....-+.+++....||+|.++|-.+.+.+...    .     ..+...+    +..++..++|||.+..++
T Consensus       263 ~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v  336 (753)
T PF11635_consen  263 VSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLV  336 (753)
T ss_pred             EEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEE
Confidence            33444344789999999999999999887543222    0     0110111    112344588999987665

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>KOG2280|consensus

Probab=90.31  E-value=12  Score=33.03  Aligned_cols=53  Identities=11%  Similarity=0.187  Sum_probs=38.4

Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      --.|+|+++. |+.+..+   .-....+..+.|+.+. .|++...||++++|++-...
T Consensus        63 ~~~I~If~~s-G~lL~~~---~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~  115 (829)
T KOG2280|consen   63 RPYIRIFNIS-GQLLGRI---LWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEF  115 (829)
T ss_pred             ceeEEEEecc-ccchHHH---HhcCCCeeeecccCCc-eEEEEeccceEEEeecchhh
Confidence            3568888876 6666655   2333488899998654 67778889999999986544

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=90.22  E-value=1  Score=20.72  Aligned_cols=26  Identities=38%  Similarity=0.372  Sum_probs=20.4

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFS   42 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~   42 (291)
                      +.|.+++.++.      +++++...+.+|+|.
T Consensus         2 E~i~aia~g~~------~vavaTS~~~lRifs   27 (27)
T PF12341_consen    2 EEIEAIAAGDS------WVAVATSAGYLRIFS   27 (27)
T ss_pred             ceEEEEEccCC------EEEEEeCCCeEEecC
Confidence            56778887754      788888889999984

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>KOG2377|consensus

Probab=90.14  E-value=9.7  Score=31.57  Aligned_cols=36  Identities=11%  Similarity=0.205  Sum_probs=31.0

Q ss_pred             CCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      ...++|.++.|++|.+.++.--.|.+|.+++....+
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~   99 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDN   99 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecCCCc
Confidence            456799999999999999999999999999984433

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=90.13  E-value=7.9  Score=30.50  Aligned_cols=72  Identities=14%  Similarity=0.138  Sum_probs=41.5

Q ss_pred             eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      .-.+.+..+.-++ ++.+++++.......-||.-...-...-   ......|..+.|.|++.+.+.+ ..|.|+.=+
T Consensus       142 ~~~gs~~~~~r~~-dG~~vavs~~G~~~~s~~~G~~~w~~~~---r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~  213 (302)
T PF14870_consen  142 ETSGSINDITRSS-DGRYVAVSSRGNFYSSWDPGQTTWQPHN---RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD  213 (302)
T ss_dssp             S----EEEEEE-T-TS-EEEEETTSSEEEEE-TT-SS-EEEE-----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred             CCcceeEeEEECC-CCcEEEEECcccEEEEecCCCccceEEc---cCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence            3456788888888 9898888765555567775432222222   3467899999999998876655 788888876

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=90.11  E-value=14  Score=33.23  Aligned_cols=94  Identities=11%  Similarity=0.083  Sum_probs=54.4

Q ss_pred             CCCceEEEEEccCCCEEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE
Q psy10348        101 HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR  179 (291)
Q Consensus       101 ~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  179 (291)
                      ..-.|..+..+|+|.+++..|..| |.|..+... .....+.      .........+.......  ....+...|..+.
T Consensus        83 ~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~------~g~~~i~Crt~~v~~~~--~~~~~~~~i~qv~  153 (717)
T PF10168_consen   83 PLFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFE------DGKKEINCRTVPVDERF--FTSNSSLEIKQVR  153 (717)
T ss_pred             CceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCcccccc------CCCcceeEEEEEechhh--ccCCCCceEEEEE
Confidence            345788999999999999998755 556555321 1001110      00000000000000000  0122456799999


Q ss_pred             Ec-----CCEEEEecCCCeEEEecCCCCC
Q psy10348        180 WL-----GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       180 ~~-----~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      |+     +..|+.-..|+++++||+....
T Consensus       154 WhP~s~~~~~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  154 WHPWSESDSHLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             EcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence            98     4588888999999999997544

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=89.77  E-value=9.7  Score=31.01  Aligned_cols=198  Identities=11%  Similarity=0.057  Sum_probs=102.6

Q ss_pred             CCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEec---CCCcE--EEEee-cC---CeEEEEECCCc-ceeeee
Q psy10348         26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP---QDFNL--LLSVS-KD---HTLRLWNIKTD-ICIAIF   95 (291)
Q Consensus        26 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~--l~s~~-~d---g~i~vwd~~~~-~~~~~~   95 (291)
                      ..+++...+++-+.+||++ |+.++.+.  .+..+.+....   -+++.  |+.++ .+   .+|++|.+... ..+..+
T Consensus        68 kSlIigTdK~~GL~VYdL~-Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v  144 (381)
T PF02333_consen   68 KSLIIGTDKKGGLYVYDLD-GKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDV  144 (381)
T ss_dssp             G-EEEEEETTTEEEEEETT-S-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-
T ss_pred             cceEEEEeCCCCEEEEcCC-CcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEc
Confidence            3578888888999999997 77777764  23334333321   02222  34443 32   46999977521 223333


Q ss_pred             cc----ccCCCCceEEEEE--cc-CCC-EEEEEecCCcEEEEeccCc---hhhhhhccccccCCCCccccccCccccCcc
Q psy10348         96 GG----VEGHRDEVLSADF--DL-LGT-KIMSCGMDHSLKLWDLTKP---EIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        96 ~~----~~~~~~~i~~~~~--~~-~~~-~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ..    +...-..++.+++  ++ +|. +.+....+|.+..|.+...   ....++...                     
T Consensus       145 ~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~---------------------  203 (381)
T PF02333_consen  145 TDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVRE---------------------  203 (381)
T ss_dssp             CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEE---------------------
T ss_pred             CCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEE---------------------
Confidence            10    0111234666766  44 344 6667788999998888532   111111110                     


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--CcccEEEEEEEecCCC-c
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--KDCEIWFIRFSMDYWQ-K  239 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~-~  239 (291)
                         +. -...+..+..+  ...|+.+-++.-|.-|+.......       ....+....+  ....+..+.+-...++ .
T Consensus       204 ---f~-~~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~-------~~~~v~~~~g~~l~aDvEGlaly~~~~g~g  272 (381)
T PF02333_consen  204 ---FK-VGSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGN-------DRTLVASADGDGLVADVEGLALYYGSDGKG  272 (381)
T ss_dssp             ---EE--SS-EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S---------EEEEEBSSSSB-S-EEEEEEEE-CCC-E
T ss_pred             ---ec-CCCcceEEEEecccCCEEEecCccEEEEEecCCCCCC-------cceeeecccccccccCccceEEEecCCCCe
Confidence               00 23356777777  558899999988888876533211       0122322222  2355667777654444 3


Q ss_pred             EEEEE-cCCCcEEEEEcCCC
Q psy10348        240 ILAVG-NQSGRTYVWDLDVQ  258 (291)
Q Consensus       240 ~l~~~-~~dg~i~vwd~~~~  258 (291)
                      ||++. -.+++..||+....
T Consensus       273 YLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  273 YLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             EEEEEEGGGTEEEEEESSTT
T ss_pred             EEEEEcCCCCeEEEEecCCC
Confidence            45444 46789999998864

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>smart00564 PQQ beta-propeller repeat

Probab=89.37  E-value=1  Score=21.45  Aligned_cols=25  Identities=4%  Similarity=0.098  Sum_probs=21.0

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEE
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHF   52 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~   52 (291)
                      .+++++.+|.+..+|.++|+.+..+
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~W~~   32 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEILWTY   32 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEEEEc
Confidence            7888888999999999999876543

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=89.07  E-value=12  Score=31.16  Aligned_cols=30  Identities=13%  Similarity=0.152  Sum_probs=22.6

Q ss_pred             cceeEEEEc--CCEEEEecCCCeEEEecCCCC
Q psy10348        173 NYVDCVRWL--GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       173 ~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      ..|.++...  .+.+++.+.+|.|.+|++...
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~  221 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG  221 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence            348888887  669999999999999999763

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=88.89  E-value=12  Score=31.00  Aligned_cols=142  Identities=13%  Similarity=0.145  Sum_probs=81.1

Q ss_pred             CCCEEEEecCCCeEEEEccCCcc-----eeEEEeeeccceeEEEEec---C-CCcEEEEeecCCeEEEEECCC--cc---
Q psy10348         25 GRPLLAVAGSRAVIRIFSPAFHA-----CVRHFYGHGHAINELKFHP---Q-DFNLLLSVSKDHTLRLWNIKT--DI---   90 (291)
Q Consensus        25 ~~~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~~v~~~~~~~---~-~~~~l~s~~~dg~i~vwd~~~--~~---   90 (291)
                      +...+++|+.+|.++||+...+.     ++-.. .-+.+|..+..-+   . +...||. -.-..+.||.+..  |.   
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~-~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~  113 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLET-QLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEH  113 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEE-ecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCccc
Confidence            44799999999999999986543     11111 2356787777542   1 2234444 5567788888732  11   


Q ss_pred             ----eeeeeccccCCC--CceEEEEEccC-----CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         91 ----CIAIFGGVEGHR--DEVLSADFDLL-----GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        91 ----~~~~~~~~~~~~--~~i~~~~~~~~-----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                          .+..+   ..|.  .....+++-|-     ..++..-+.||.+.+|+-+.......+..                 
T Consensus       114 g~~~~L~~~---yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-----------------  173 (418)
T PF14727_consen  114 GNQYQLELI---YEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-----------------  173 (418)
T ss_pred             CcEEEEEEE---EEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-----------------
Confidence                11111   2222  22233333332     24788889999999999766543222211                 


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCC
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~  200 (291)
                               ...+++   +.|.  -+.|++++.+..+..|...
T Consensus       174 ---------~llPgP---l~Y~~~tDsfvt~sss~~l~~Yky~  204 (418)
T PF14727_consen  174 ---------FLLPGP---LCYCPRTDSFVTASSSWTLECYKYQ  204 (418)
T ss_pred             ---------CCCCcC---eEEeecCCEEEEecCceeEEEecHH
Confidence                     002222   3333  5677788888888888753

>PLN02193 nitrile-specifier protein

Probab=88.80  E-value=14  Score=31.42  Aligned_cols=25  Identities=12%  Similarity=0.078  Sum_probs=16.6

Q ss_pred             CCcEEEEeecCC-----eEEEEECCCccee
Q psy10348         68 DFNLLLSVSKDH-----TLRLWNIKTDICI   92 (291)
Q Consensus        68 ~~~~l~s~~~dg-----~i~vwd~~~~~~~   92 (291)
                      ++.+++.|+.++     .+.++|+.+.+..
T Consensus       228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~  257 (470)
T PLN02193        228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWK  257 (470)
T ss_pred             CCEEEEECCCCCCCCCccEEEEECCCCEEE
Confidence            456777776553     5788888876543

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=88.52  E-value=10  Score=29.56  Aligned_cols=54  Identities=11%  Similarity=0.121  Sum_probs=39.4

Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe------cCCcEEEEeccCch
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG------MDHSLKLWDLTKPE  135 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~------~d~~i~v~d~~~~~  135 (291)
                      ..|++||....+....-   .+-.+.|+.+.|..+.++++.|.      ....+..||+.+..
T Consensus        16 ~~lC~yd~~~~qW~~~g---~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~   75 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPG---NGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT   75 (281)
T ss_pred             CEEEEEECCCCEeecCC---CCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence            35999999877766654   45678999999986666666654      34567888887765

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=88.31  E-value=12  Score=30.15  Aligned_cols=14  Identities=7%  Similarity=0.045  Sum_probs=9.6

Q ss_pred             CeEEEEECCCccee
Q psy10348         79 HTLRLWNIKTDICI   92 (291)
Q Consensus        79 g~i~vwd~~~~~~~   92 (291)
                      ..+.+||..+++..
T Consensus       168 ~~v~~YDp~t~~W~  181 (346)
T TIGR03547       168 KNVLSYDPSTNQWR  181 (346)
T ss_pred             ceEEEEECCCCcee
Confidence            45788888776543

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=88.20  E-value=15  Score=31.22  Aligned_cols=162  Identities=14%  Similarity=0.138  Sum_probs=71.9

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccc---eeEEEEecCCCcEEEEeec-------------CCeEEEEECCCcc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA---INELKFHPQDFNLLLSVSK-------------DHTLRLWNIKTDI   90 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~s~~~-------------dg~i~vwd~~~~~   90 (291)
                      .+++..+  +.++.+|.. |+.+.......+.   =..+...| +|++|+.+..             .-.|...| .+|+
T Consensus       160 ~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~-nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~  234 (477)
T PF05935_consen  160 NLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELP-NGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGE  234 (477)
T ss_dssp             -EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-T-TS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-
T ss_pred             CEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECC-CCCEEEEEeecccccCCCCccEecCEEEEEC-CCCC
Confidence            3554443  678888875 7666555432211   24566778 8888887772             11245555 5665


Q ss_pred             eeeeecc---ccC-------------------CC--CceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccc
Q psy10348         91 CIAIFGG---VEG-------------------HR--DEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        91 ~~~~~~~---~~~-------------------~~--~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~  145 (291)
                      .+..+.-   +..                   ..  .-+.++.+.+....|+.++. -..|...|.++++....+.....
T Consensus       235 vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~  314 (477)
T PF05935_consen  235 VVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGG  314 (477)
T ss_dssp             EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT
T ss_pred             EEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCC
Confidence            5544321   000                   00  23788999985555555544 55888899888887766654444


Q ss_pred             cCCCCccccccCccccCcccccccccCcce----eEEEEc-CCEEEEecCCC---eEEEecCCCCC
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYV----DCVRWL-GDFVLSKSCEN---CIICWKPGRLE  203 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~-~~~l~~~~~d~---~i~iwd~~~~~  203 (291)
                      +.+......+.....          ...++    ....|. |++-+.--.++   .|.+||-....
T Consensus       315 w~~~~~~~ll~~vd~----------~G~~~~~~~~~~~~~~gQH~~~~~~~g~~~~l~vFDNg~~r  370 (477)
T PF05935_consen  315 WNGTYQDYLLTPVDS----------NGNPIDCGDGDFDWFWGQHTAHLIPDGPQGNLLVFDNGNGR  370 (477)
T ss_dssp             --TTTGGGB-EEB-T----------TS-B-EBSSSS----SS-EEEEE-TTS---SEEEEE--TTG
T ss_pred             CCcccchheeeeecc----------CCceeeccCCCCcccccccceEEcCCCCeEEEEEEECCCCC
Confidence            433321111111100          01111    112233 66666666777   89999976554

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=88.16  E-value=19  Score=32.31  Aligned_cols=30  Identities=23%  Similarity=0.362  Sum_probs=23.3

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEcc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSP   43 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~   43 (291)
                      ++.|-+.+||.|.    +.++....+..|.+++-
T Consensus       112 ~nGIvaa~wS~DE----~~~cvvt~~r~il~~~k  141 (1243)
T COG5290         112 SNGIVAASWSADE----KTWCVVTSTREILLFDK  141 (1243)
T ss_pred             cCceEEEeeccCC----ceEEEEEcCceEEEEec
Confidence            5678888999988    47777777788888763

>KOG1900|consensus

Probab=88.13  E-value=18  Score=34.27  Aligned_cols=175  Identities=14%  Similarity=0.211  Sum_probs=90.6

Q ss_pred             eccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEE--------ccCCCEEEEEecCCcE
Q psy10348         55 HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADF--------DLLGTKIMSCGMDHSL  126 (291)
Q Consensus        55 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~l~~~~~d~~i  126 (291)
                      |...-..+-+-|.=++.-+|  -|..+.+|+.+++.....+   .+....|..+..        -|.=++++..+.--.|
T Consensus        77 ~~~~~~~mGiFpeI~RaWiT--iDn~L~lWny~~~~e~~~~---d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei  151 (1311)
T KOG1900|consen   77 NIECKTDMGIFPEIGRAWIT--IDNNLFLWNYESDNELAEY---DGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEI  151 (1311)
T ss_pred             CcceeeeeccchhhcceEEE--eCCeEEEEEcCCCCccccc---cchhhhheeeeeecCCCCcchhhhheeEEecccceE
Confidence            33333445555634444444  5788999999998877777   566666666653        2333444444445567


Q ss_pred             EEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCC--
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRL--  202 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~--  202 (291)
                      .++-+.-.+......            ++...       .........|+++...  |+.+++|- ||  .+|.+.-.  
T Consensus       152 ~ilgV~~~~~~~~~~------------~f~~~-------~~i~~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Yq~~  209 (1311)
T KOG1900|consen  152 VILGVSFDEFTGELS------------IFNTS-------FKISVDGVSVNCITYTENGRIFFAGR-DG--NLYELVYQAE  209 (1311)
T ss_pred             EEEEEEeccccCccc------------ccccc-------eeeecCCceEEEEEeccCCcEEEeec-CC--CEEEEEEecc
Confidence            776554332111100            00000       0011134558888865  66666554 55  45544211  


Q ss_pred             Ccc------ccccCC----Cceeeeeeec-CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        203 EDK------ELRTNE----TNVTIINRLN-FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       203 ~~~------~~~~~~----~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      ...      ......    .-...+-.+. .+..+|..+.  .+.....+.+=+..|+|.+||+...
T Consensus       210 ~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~--ID~SR~IlY~lsek~~v~~Y~i~~~  274 (1311)
T KOG1900|consen  210 DGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQIT--IDNSRNILYVLSEKGTVSAYDIGGN  274 (1311)
T ss_pred             CchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeE--eccccceeeeeccCceEEEEEccCC
Confidence            111      000000    0000022222 3445555544  4444789999999999999999873

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=87.94  E-value=7.8  Score=27.61  Aligned_cols=30  Identities=10%  Similarity=0.165  Sum_probs=23.9

Q ss_pred             CcceeEEEEc--------CCEEEEecCCCeEEEecCCC
Q psy10348        172 RNYVDCVRWL--------GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       172 ~~~v~~~~~~--------~~~l~~~~~d~~i~iwd~~~  201 (291)
                      ...+..++|+        +-+|++.+.++.|.+|....
T Consensus        85 ~~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   85 SSQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            3478999998        12789999999999997653

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PRK13684 Ycf48-like protein; Provisional

Probab=87.91  E-value=13  Score=29.95  Aligned_cols=109  Identities=15%  Similarity=0.028  Sum_probs=59.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEE-ccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIF-SPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw-~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      ...++++.+.|++    .+++++ ..|.+..- + ..++.-.... .-...+.++.+.+ ++..++.+ ..|.+.+=...
T Consensus       172 ~g~~~~i~~~~~g----~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~-~g~~~~vg-~~G~~~~~s~d  243 (334)
T PRK13684        172 AGVVRNLRRSPDG----KYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQP-DGNLWMLA-RGGQIRFNDPD  243 (334)
T ss_pred             cceEEEEEECCCC----eEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcC-CCCEEEEe-cCCEEEEccCC
Confidence            4567788888876    355544 45655432 2 2222222222 2346788999998 77776664 56766543334


Q ss_pred             Ccceeeeeccc-cCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         88 TDICIAIFGGV-EGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        88 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      .|..-...... ......+..+.+.+++..++ ++.+|.+.
T Consensus       244 ~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~  283 (334)
T PRK13684        244 DLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL  283 (334)
T ss_pred             CCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE
Confidence            44332222100 01224578899998776544 55567554

>KOG1897|consensus

Probab=87.40  E-value=23  Score=32.51  Aligned_cols=120  Identities=14%  Similarity=-0.030  Sum_probs=69.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE-eeeccceeEEEEecC--CCc---EEEEeecCCeEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQ--DFN---LLLSVSKDHTLRLW   84 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~---~l~s~~~dg~i~vw   84 (291)
                      +.++..+.+.+..    .++.++.++.+...++..+.+.... ...+..|.|+.++|.  +.+   +++.|.++..+.+-
T Consensus       488 ~~~ti~~~~~n~s----qVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l  563 (1096)
T KOG1897|consen  488 GKITIGVVSANAS----QVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMIL  563 (1096)
T ss_pred             CceEEEEEeecce----EEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEE
Confidence            3444444454443    6666666677777777665522221 123568999999973  233   88888887765544


Q ss_pred             EC-CCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348         85 NI-KTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        85 d~-~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~  134 (291)
                      -. .....+.... ...--...|.-..+-.+..+|+++..||.+.-|-+...
T Consensus       564 ~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~  615 (1096)
T KOG1897|consen  564 TFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDIN  615 (1096)
T ss_pred             EECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcc
Confidence            32 2222222110 00112234555556556789999999999877665543

>PF01011 PQQ: PQQ enzyme repeat family

Probab=87.38  E-value=2.4  Score=21.18  Aligned_cols=27  Identities=7%  Similarity=0.043  Sum_probs=22.9

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEee
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYG   54 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~   54 (291)
                      .+..++.+|.|+-.|.++|+.+..++.
T Consensus         2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~   28 (38)
T PF01011_consen    2 RVYVGTPDGYLYALDAKTGKVLWKFQT   28 (38)
T ss_dssp             EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred             EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence            456669999999999999999888763

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=87.03  E-value=19  Score=31.05  Aligned_cols=106  Identities=9%  Similarity=0.106  Sum_probs=59.3

Q ss_pred             cceeEEEEc-----CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC---CcccEEEEEEEecCCCcEEEE
Q psy10348        173 NYVDCVRWL-----GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF---KDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       173 ~~v~~~~~~-----~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .-|..+.|.     +. .+++.-....|.+|.+........       +.+.....   ..-++-.-.+.|+|....|++
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~-------K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~V  129 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERN-------KLLMSQTCEIREPFPVLPQGCVWHPKKAILTV  129 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccc-------cceeeeeeeccCCcccCCCcccccCCCceEEE
Confidence            347788886     11 344455678999999863221100       11111100   011111112457787888888


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      -.....=.++++.....  ....-+   ...+.|.|.+|.+||+.|+
T Consensus       130 LT~~dvSV~~sV~~d~s--rVkaDi---~~~G~IhCACWT~DG~RLV  171 (671)
T PF15390_consen  130 LTARDVSVLPSVHCDSS--RVKADI---KTSGLIHCACWTKDGQRLV  171 (671)
T ss_pred             EecCceeEeeeeeeCCc--eEEEec---cCCceEEEEEecCcCCEEE
Confidence            77665555677765442  111222   3457899999999999986

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=87.02  E-value=13  Score=29.13  Aligned_cols=59  Identities=14%  Similarity=0.174  Sum_probs=40.2

Q ss_pred             eEEEEccCCcceeEEEeee------ccceeEEEEecCCC----cEE-EEeecCCeEEEEECCCcceeeee
Q psy10348         37 VIRIFSPAFHACVRHFYGH------GHAINELKFHPQDF----NLL-LSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~----~~l-~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      +|.+||+.+++.++++.-.      .+.+..+.+...++    .+. ++=...+-|.|+|+.+++..+.+
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~  104 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVL  104 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEE
T ss_pred             EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEe
Confidence            7899999999988877522      35667777765332    233 33344467999999998776655

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=86.57  E-value=2.9  Score=21.17  Aligned_cols=28  Identities=25%  Similarity=0.195  Sum_probs=20.3

Q ss_pred             CCcEEEE-eecCCeEEEEECCCcceeeee
Q psy10348         68 DFNLLLS-VSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        68 ~~~~l~s-~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      +++.|++ ...+++|.++|..+++.+..+
T Consensus         2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i   30 (42)
T TIGR02276         2 DGTKLYVTNSGSNTVSVIDTATNKVIATI   30 (42)
T ss_pred             CCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            4454444 445789999999888877776

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=85.97  E-value=16  Score=29.13  Aligned_cols=66  Identities=15%  Similarity=0.118  Sum_probs=33.3

Q ss_pred             CCcEEEEeec-----CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc----EEEEeccCch
Q psy10348         68 DFNLLLSVSK-----DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS----LKLWDLTKPE  135 (291)
Q Consensus        68 ~~~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~----i~v~d~~~~~  135 (291)
                      ++.+.+.|+.     ...+..||+.+.+.... ..+... ......+...+++..+.|+.++.    +.+||+.+.+
T Consensus       123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~  197 (323)
T TIGR03548       123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFEL-PDFPGE-PRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ  197 (323)
T ss_pred             CCEEEEEeCcCCCccCceEEEEcCCCCCeeEC-CCCCCC-CCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence            4566676664     23578888887654332 111111 11112222335667777776542    3466666543

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=85.94  E-value=17  Score=29.58  Aligned_cols=106  Identities=12%  Similarity=-0.075  Sum_probs=64.1

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeee--ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC-Cc
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGH--GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR-DE  104 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~  104 (291)
                      .+.++..+|.|.-.|.++++.+.....-  ...+..-.+.. +|+ ++.++.+|.+..+|..+|+.+....   ... ..
T Consensus        70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~-~G~-i~~g~~~g~~y~ld~~~G~~~W~~~---~~~~~~  144 (370)
T COG1520          70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGS-DGK-IYVGSWDGKLYALDASTGTLVWSRN---VGGSPY  144 (370)
T ss_pred             eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEe-CCe-EEEecccceEEEEECCCCcEEEEEe---cCCCeE
Confidence            5666678888888888888866433311  12222223333 544 7777888999999998899888763   222 11


Q ss_pred             eEEEEEccCCCEEEEEecCCcEEEEeccCchhhhh
Q psy10348        105 VLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA  139 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~  139 (291)
                      +..-..-.++ .++.++.++.+...|-.+++....
T Consensus       145 ~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~  178 (370)
T COG1520         145 YASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWT  178 (370)
T ss_pred             EecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEE
Confidence            1111122223 444444678888888887776544

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=85.51  E-value=3.2  Score=20.73  Aligned_cols=30  Identities=13%  Similarity=0.119  Sum_probs=19.8

Q ss_pred             CCCCceEEEEEccCCCEEEEEec-C--CcEEEE
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGM-D--HSLKLW  129 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~-d--~~i~v~  129 (291)
                      .....-....|+|||+.|+-++. +  |...||
T Consensus         6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            44556778899999998776654 4  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PLN02193 nitrile-specifier protein

Probab=85.34  E-value=22  Score=30.21  Aligned_cols=105  Identities=11%  Similarity=0.077  Sum_probs=50.6

Q ss_pred             CEEEEecCC-----CeEEEEccCCcceeE--EEe--eeccceeEEEEecCCCcEEEEeecCC-----eEEEEECCCccee
Q psy10348         27 PLLAVAGSR-----AVIRIFSPAFHACVR--HFY--GHGHAINELKFHPQDFNLLLSVSKDH-----TLRLWNIKTDICI   92 (291)
Q Consensus        27 ~~l~~~~~d-----g~i~vw~~~~~~~~~--~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~   92 (291)
                      .+++.|+.+     +.+.+||+.+.+-..  .+.  .....-.+++..  ++.+++.|+.++     .+..||+.+.+..
T Consensus       230 ~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~--~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~  307 (470)
T PLN02193        230 TLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAAD--EENVYVFGGVSATARLKTLDSYNIVDKKWF  307 (470)
T ss_pred             EEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEE--CCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence            466666654     357788887654322  110  001111122222  456777776543     3677888766543


Q ss_pred             eeec--cccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCch
Q psy10348         93 AIFG--GVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPE  135 (291)
Q Consensus        93 ~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~  135 (291)
                      ..-.  ........-..+.  -+++.++.++.+    ..+.+||+.+.+
T Consensus       308 ~~~~~~~~~~~R~~~~~~~--~~gkiyviGG~~g~~~~dv~~yD~~t~~  354 (470)
T PLN02193        308 HCSTPGDSFSIRGGAGLEV--VQGKVWVVYGFNGCEVDDVHYYDPVQDK  354 (470)
T ss_pred             eCCCCCCCCCCCCCcEEEE--ECCcEEEEECCCCCccCceEEEECCCCE
Confidence            2110  0001111111222  256666777655    357888887654

>KOG1896|consensus

Probab=84.94  E-value=36  Score=32.26  Aligned_cols=182  Identities=13%  Similarity=0.150  Sum_probs=93.9

Q ss_pred             CeEEEEccCCcceeEEEee-eccceeEEEEec--------CCCcEEEEeec---------CCeEEEEECCC-----cc--
Q psy10348         36 AVIRIFSPAFHACVRHFYG-HGHAINELKFHP--------QDFNLLLSVSK---------DHTLRLWNIKT-----DI--   90 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~--------~~~~~l~s~~~---------dg~i~vwd~~~-----~~--   90 (291)
                      ..|.+.+..+++.+..+.- ...-|++++...        ....+|++|..         .|.+.|+|+-.     |+  
T Consensus      1004 f~i~LisP~sw~vi~~iefq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~ 1083 (1366)
T KOG1896|consen 1004 FSIQLISPESWEVIDKIEFQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPF 1083 (1366)
T ss_pred             ceeEEecCCccccccccccCccceeeEEEEEEEEecccccCCcceEEEEEeecccccccCcccEEEEEEEEecCCCCCCc
Confidence            4466666666655544321 112344444321        11357777742         48899999743     21  


Q ss_pred             ---eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEec-cCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         91 ---CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        91 ---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                         .++.+. .+..++.|..++= =+|. |+++. ...|.+|++ +....+..-     |                    
T Consensus      1084 t~~KlKel~-~eE~KGtVsavce-V~G~-l~~~~-GqKI~v~~l~r~~~ligVa-----F-------------------- 1134 (1366)
T KOG1896|consen 1084 TKNKLKELY-IEEQKGTVSAVCE-VRGH-LLSSQ-GQKIIVRKLDRDSELIGVA-----F-------------------- 1134 (1366)
T ss_pred             ccceeeeee-hhhcccceEEEEE-eccE-EEEcc-CcEEEEEEeccCCcceeeE-----E--------------------
Confidence               222221 1345667766552 2454 44443 367999999 444422110     0                    


Q ss_pred             cccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        167 TRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                       .+ -.-.+.++..-.++|+.|..-..|.+.-.......         -.+..-....-.+.++.|-.+...-+++++..
T Consensus      1135 -iD-~~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~r---------lsL~srd~~~l~v~s~EFLVdg~~L~flvsDa 1203 (1366)
T KOG1896|consen 1135 -ID-LPLYVHSMKVVKNLILAGDVMKSISFLGFQEEPYR---------LSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDA 1203 (1366)
T ss_pred             -ec-cceeEEehhhhhhheehhhhhhceEEEEEccCceE---------EEEeecCCchhhceeeeeEEcCCeeEEEEEcC
Confidence             00 01112222222667777776666666554432110         00111122334456677777766678899999


Q ss_pred             CCcEEEEEcCC
Q psy10348        247 SGRTYVWDLDV  257 (291)
Q Consensus       247 dg~i~vwd~~~  257 (291)
                      |++|++|-..-
T Consensus      1204 ~rNi~vy~Y~P 1214 (1366)
T KOG1896|consen 1204 DRNIHVYMYAP 1214 (1366)
T ss_pred             CCcEEEEEeCC
Confidence            99999987654

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=84.91  E-value=21  Score=29.61  Aligned_cols=72  Identities=18%  Similarity=0.200  Sum_probs=45.9

Q ss_pred             eeEEEEecCCCcEEEEe-ecCC----eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC---------
Q psy10348         59 INELKFHPQDFNLLLSV-SKDH----TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH---------  124 (291)
Q Consensus        59 v~~~~~~~~~~~~l~s~-~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------  124 (291)
                      +....++| +++++|-+ +..|    .++++|+++|+.+...    -....-..+.|.++++.|+....+.         
T Consensus       126 ~~~~~~Sp-dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~----i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~  200 (414)
T PF02897_consen  126 LGGFSVSP-DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG----IENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGY  200 (414)
T ss_dssp             EEEEEETT-TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE----EEEEESEEEEECTTSSEEEEEECSTTTSS-CCGC
T ss_pred             eeeeeECC-CCCEEEEEecCCCCceEEEEEEECCCCcCcCCc----ccccccceEEEeCCCCEEEEEEeCcccccccCCC
Confidence            34678899 77877754 4444    4999999999766532    1112223499999988776665433         


Q ss_pred             --cEEEEeccCch
Q psy10348        125 --SLKLWDLTKPE  135 (291)
Q Consensus       125 --~i~v~d~~~~~  135 (291)
                        .|+.|++.+..
T Consensus       201 ~~~v~~~~~gt~~  213 (414)
T PF02897_consen  201 PRQVYRHKLGTPQ  213 (414)
T ss_dssp             CEEEEEEETTS-G
T ss_pred             CcEEEEEECCCCh
Confidence              26667776654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PLN02153 epithiospecifier protein

Probab=84.64  E-value=19  Score=28.94  Aligned_cols=64  Identities=8%  Similarity=0.125  Sum_probs=32.6

Q ss_pred             CEEEEecCC-----CeEEEEccCCccee--EEEee---e-ccceeEEEEecCCCcEEEEeecC-----------CeEEEE
Q psy10348         27 PLLAVAGSR-----AVIRIFSPAFHACV--RHFYG---H-GHAINELKFHPQDFNLLLSVSKD-----------HTLRLW   84 (291)
Q Consensus        27 ~~l~~~~~d-----g~i~vw~~~~~~~~--~~~~~---~-~~~v~~~~~~~~~~~~l~s~~~d-----------g~i~vw   84 (291)
                      ++++.|+.+     ..+.+||+.+.+-.  ..+..   . ...-.+++..  ++.+++.|+.+           ..+.+|
T Consensus        87 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~v~~y  164 (341)
T PLN02153         87 KLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASD--ENHVYVFGGVSKGGLMKTPERFRTIEAY  164 (341)
T ss_pred             EEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEE--CCEEEEECCccCCCccCCCcccceEEEE
Confidence            466666643     35777887765422  11100   0 1111222332  45677777653           247788


Q ss_pred             ECCCccee
Q psy10348         85 NIKTDICI   92 (291)
Q Consensus        85 d~~~~~~~   92 (291)
                      |.++.+..
T Consensus       165 d~~~~~W~  172 (341)
T PLN02153        165 NIADGKWV  172 (341)
T ss_pred             ECCCCeEe
Confidence            88876543

>KOG4460|consensus

Probab=84.61  E-value=19  Score=30.58  Aligned_cols=78  Identities=13%  Similarity=0.229  Sum_probs=50.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEc---------cCCcceeE---E------Ee--eeccceeEEEEecCC--C
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFS---------PAFHACVR---H------FY--GHGHAINELKFHPQD--F   69 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~---------~~~~~~~~---~------~~--~~~~~v~~~~~~~~~--~   69 (291)
                      .|..+..++.|+    .++-+|.+|.+.++=         .++|+..-   +      +.  ...-.+...+|+|+.  .
T Consensus       105 eV~~vl~s~~GS----~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D  180 (741)
T KOG4460|consen  105 EVYQVLLSPTGS----HVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILD  180 (741)
T ss_pred             EEEEEEecCCCc----eEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCC
Confidence            466777788885    888888888766543         12333211   1      11  111246678899944  4


Q ss_pred             cEEEEeecCCeEEEEECCCcceee
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      ..|..-..|..|++||+...+.+.
T Consensus       181 ~hL~iL~sdnviRiy~lS~~tely  204 (741)
T KOG4460|consen  181 PHLVLLTSDNVIRIYSLSEPTELY  204 (741)
T ss_pred             ceEEEEecCcEEEEEecCCcchhh
Confidence            567777889999999998766553

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=83.18  E-value=18  Score=27.61  Aligned_cols=79  Identities=9%  Similarity=-0.032  Sum_probs=50.1

Q ss_pred             eeeecceeEEEEeeeccC---CCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEec-C-CCcEEEEeecCCe
Q psy10348          6 SLLIEENFYTCAWSMDLE---SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP-Q-DFNLLLSVSKDHT   80 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~---~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~~~l~s~~~dg~   80 (291)
                      .+.....|+|++--....   ..-..|+.|.++|.|.|.|.+.-..+.+++-..-++.-.+.-. + -...|+.++.||.
T Consensus       172 pl~~~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~  251 (257)
T PF14779_consen  172 PLKRQTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGK  251 (257)
T ss_pred             CcccCceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCE
Confidence            445567788886543322   1235899999999999999987777777664444442222111 0 2346777788998


Q ss_pred             EEEE
Q psy10348         81 LRLW   84 (291)
Q Consensus        81 i~vw   84 (291)
                      |++.
T Consensus       252 iy~i  255 (257)
T PF14779_consen  252 IYTI  255 (257)
T ss_pred             EEEE
Confidence            8753

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=83.08  E-value=26  Score=29.20  Aligned_cols=75  Identities=15%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             cceeEEEEeeeccCCC-CCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348         10 EENFYTCAWSMDLESG-RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ....+.++.-|-+... ..++++-+-||.+.+++-+.-...+.+.. ---.-.+.|.+ ..+.|++++.+..+..|..
T Consensus       128 ~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~-~tDsfvt~sss~~l~~Yky  203 (418)
T PF14727_consen  128 QRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCP-RTDSFVTASSSWTLECYKY  203 (418)
T ss_pred             ccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEee-cCCEEEEecCceeEEEecH
Confidence            4455566666665533 57899999999999999765443333332 11223467888 6688888888888888864

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=82.99  E-value=33  Score=30.36  Aligned_cols=133  Identities=14%  Similarity=0.213  Sum_probs=70.0

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEe-eeccceeEEEEec-----CCCcEEEE
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFY-GHGHAINELKFHP-----QDFNLLLS   74 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~-~~~~~v~~~~~~~-----~~~~~l~s   74 (291)
                      .++++.-+++|-.+.|..++    ..+++...+|.|.+||...+..  +..+. .++..+.-=+|-+     ....++++
T Consensus       122 ~~~~~kl~~kvv~Ik~~~~~----~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~  197 (670)
T PF10395_consen  122 NEFELKLDDKVVGIKFSSDG----KIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLT  197 (670)
T ss_pred             ceEEEEcccceEEEEEecCC----CEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEE
Confidence            35666778999999999887    4899999999999999933221  11221 1121111112222     12345555


Q ss_pred             eec-C---CeEEEEEC-CCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         75 VSK-D---HTLRLWNI-KTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        75 ~~~-d---g~i~vwd~-~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      .+. +   -..+++.+ .+...+..+.....+........|.- +|. |+-= .+++|.+|++...+...++.
T Consensus       198 v~~~~~~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~-LY~l-~~~~i~~ysip~f~~~~tI~  268 (670)
T PF10395_consen  198 VSQLSNSKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGK-LYQL-SKKTISSYSIPNFQIQKTIS  268 (670)
T ss_pred             EEEcCCCcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCE-EEEE-eCCEEEEEEcCCceEEEEEE
Confidence            444 2   23667777 11222222210011222222222322 444 3322 57899999998877655543

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>KOG3522|consensus

Probab=82.98  E-value=25  Score=31.70  Aligned_cols=140  Identities=12%  Similarity=0.026  Sum_probs=80.7

Q ss_pred             CCEEEEecCCCeEEEEccCCcce---eEEE-eeeccceeEEEEecCCCcEEEEeecCCeEEEE--------ECCCcceee
Q psy10348         26 RPLLAVAGSRAVIRIFSPAFHAC---VRHF-YGHGHAINELKFHPQDFNLLLSVSKDHTLRLW--------NIKTDICIA   93 (291)
Q Consensus        26 ~~~l~~~~~dg~i~vw~~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw--------d~~~~~~~~   93 (291)
                      -+.+..|+.++.|.++.-..+..   .... ..-...+.++.+++   .-+..|.-||++-.+        |.+   +..
T Consensus       547 ~PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss---~Slgagl~dgt~a~y~rap~gSwd~e---p~~  620 (925)
T KOG3522|consen  547 HPTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSS---GSLGAGLIDGTLAVYGRAPSGSWDGE---PNI  620 (925)
T ss_pred             CCcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhccc---cccccCccCCccccccCCCCCCCCCC---Ccc
Confidence            45788999999999998652221   1111 12235566777765   334555566665544        332   222


Q ss_pred             eeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         94 IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        94 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                      .+   ..-..+|...++..+   ++.++.+|.|.++...+.........                         ...|..
T Consensus       621 ~~---~~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~lea-------------------------hqee~~  669 (925)
T KOG3522|consen  621 SI---PTGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEA-------------------------HQEEAH  669 (925)
T ss_pred             cc---ccCCccccchhhhhc---eeeeecCCceEEEechhccccchhHH-------------------------HHhhcc
Confidence            22   234567777777533   56667799999999877554433221                         012667


Q ss_pred             ceeEEEEcCC-EEEEecCCCeEEEecCCCC
Q psy10348        174 YVDCVRWLGD-FVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       174 ~v~~~~~~~~-~l~~~~~d~~i~iwd~~~~  202 (291)
                      .|+++.+.++ ..++-.....++.++..+.
T Consensus       670 ~Vthm~~~~~gVwvafasG~~~rlfhtetl  699 (925)
T KOG3522|consen  670 SVTHMLYLDNGVWVAFASGDEERLFHTETL  699 (925)
T ss_pred             eEEEEEeeCCceEEEEcCCCEEEEeccccc
Confidence            7899988844 3333333445555555443

>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences

Probab=82.63  E-value=5.4  Score=27.11  Aligned_cols=50  Identities=14%  Similarity=0.151  Sum_probs=24.4

Q ss_pred             EecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        233 SMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       233 ~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      -+++|.++|+.++ .|++|+.|++...++.-   ..+....+..+..+++|-|.
T Consensus        17 ~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l---~~l~~~~s~~~~~G~~~lPK   67 (136)
T PF08954_consen   17 FYDEDTNLLYLAGKGDGNIRYYEVSDESPYL---HYLSEYRSPEPQKGFAFLPK   67 (136)
T ss_dssp             EE-TTT-EEEEEETT-S-EEEEEE-SSTTSE---EEEEEE--SS--SEEEE--G
T ss_pred             eEcCCCCEEEEEeccCcEEEEEEEcCCCCce---EEccccccCCCeEeeEecCc
Confidence            3456677765555 89999999998875422   33332234556677777663

It has no known function []. ; PDB: 2B4E_A 2AQ5_A.

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=81.32  E-value=26  Score=27.96  Aligned_cols=66  Identities=14%  Similarity=0.109  Sum_probs=31.1

Q ss_pred             CCcEEEEeecCC-----eEEEEECCCcce---eeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCc
Q psy10348         68 DFNLLLSVSKDH-----TLRLWNIKTDIC---IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKP  134 (291)
Q Consensus        68 ~~~~l~s~~~dg-----~i~vwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~  134 (291)
                      ++.+++.|+.++     .+..+|+.+.+.   ...+..+....... +++. -++...+.|+..     ..+..||+.+.
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~-~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~  149 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENG-SACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQ  149 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCc-eEEE-ECCEEEEEeCcCCCccCceEEEEcCCCC
Confidence            446777776543     466777766553   12221111111111 2222 245566666642     34666776654


Q ss_pred             h
Q psy10348        135 E  135 (291)
Q Consensus       135 ~  135 (291)
                      +
T Consensus       150 ~  150 (323)
T TIGR03548       150 E  150 (323)
T ss_pred             C
Confidence            3

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		1e-113
3jzn_A	366	Structure Of Eed In Apo Form Length = 366		1e-113
3iiw_A	365	Crystal Structure Of Eed In Complex With A Trimethy		1e-113
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		1e-113
3iiy_A	365	Crystal Structure Of Eed In Complex With A Trimethy		1e-112
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		1e-09
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		1e-08
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		1e-08
2gnq_A	336	Structure Of Wdr5 Length = 336		3e-08
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		3e-08
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		3e-08
2h9l_A	329	Wdr5delta23 Length = 329		4e-08
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		4e-08
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		4e-08
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		4e-08
2g99_A	308	Structural Basis For The Specific Recognition Of Me		4e-08
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		4e-08
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		4e-08
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		4e-08
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		4e-08
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-08
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		4e-08
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		4e-08
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-07
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-07
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-07
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		2e-07
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		5e-07
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		8e-07
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		1e-06
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		1e-06
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		6e-06
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		2e-05
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-05
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		2e-05
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		4e-05
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		1e-04
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		1e-04
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-04
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		3e-04
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		4e-04
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		5e-04
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		5e-04
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		6e-04
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		6e-04
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		7e-04
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		8e-04

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score =  405 bits (1041), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/283 (63%), Positives = 230/283 (81%), Gaps = 2/283 (0%)
Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 105 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 164
Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 165 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 224
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 225 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 284
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 285 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 344
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct: 345 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 387

>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366

Iteration: 1
 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/283 (63%), Positives = 230/283 (81%), Gaps = 2/283 (0%)
Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 69  DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 128
Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 129 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 248
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct: 309 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 351

>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365

Iteration: 1
 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/283 (63%), Positives = 230/283 (81%), Gaps = 2/283 (0%)
Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 68  DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 127
Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 128 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 187
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 188 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 247
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 248 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 307
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct: 308 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 350

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 179/283 (63%), Positives = 230/283 (81%), Gaps = 2/283 (0%)
Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 64  DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 123
Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 124 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 183
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 184 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 243
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFSMD+WQK+LA+GNQ 
Sbjct: 244 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 303
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct: 304 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 346

>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365

Iteration: 1
 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 178/283 (62%), Positives = 229/283 (80%), Gaps = 2/283 (0%)
Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           +ENFYTCAW+ D  +  PLLAVAGSR +IRI +P    C++H+ GHG+AINELKFHP+D 
Sbjct: 68  DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 127
Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
           NLLLSVSKDH LRLWNI+TD  +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 128 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 187
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
            +    + +A  ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 188 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 247
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
           CEN I+CWKPG++ED   +++ +E+NVTI+ R ++  C+IW++RFS D+WQK+LA+GNQ 
Sbjct: 248 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSTDFWQKMLALGNQV 307
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
           G+ YVWDL+V+DP   K   L+H +C +A+RQT+ S++ ++L+
Sbjct: 308 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 350

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 24  SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
           SG+ LLA   +   I+++      C+R  +GH H ++ +   P + + ++S S+D T+++
Sbjct: 161 SGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKM 218
Query: 84  WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE 142
           W ++T  C+  F    GHR+ V     +  GT I SC  D ++++W +   E K    E
Sbjct: 219 WEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 75  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 129
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT +C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 130 FDESVRIWDVKTGMCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 75  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 129
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT +C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 130 FDESVRIWDVKTGMCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 96  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 150
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+        H D V +  F+  G+ I+S   D   ++WD
Sbjct: 151 FDESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 201

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 94  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+        H D V +  F+  G+ I+S   D   ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 78  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 132
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 133 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 183

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 89  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 143
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 144 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 194

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 73  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 127
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 128 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 178

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 72  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 126
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 127 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 78  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 132
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 133 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 183

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 68  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 122
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 123 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 78  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 132
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 133 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 183

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 72  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 126
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 127 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 77  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 131
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 132 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 182

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 75  AWSSD----SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 129
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 130 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 75  AWSSD----SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 129
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 130 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 75  AWSSD----SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 129
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 130 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 17  AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
           AWS D      LL  A     ++I+  +   C++   GH + +    F+PQ  NL++S S
Sbjct: 71  AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 125
Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
            D ++R+W++KT  C+     +  H D V +  F+  G+ I+S   D   ++WD
Sbjct: 126 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 176

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 19  SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
           S+   +G+P L ++ SR    I          F   VR F GH H + +      D    
Sbjct: 22  SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 80
Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           LS S D TLRLW++ T      F    GH+ +V+S D D   + I+S   D ++K+W +
Sbjct: 81  LSASWDKTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 19  SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
           S+   +G+P L ++ SR    I          F   VR F GH H + +      D    
Sbjct: 22  SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 80
Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           LS S D TLRLW++ T      F    GH+ +V+S D D   + I+S   D ++K+W +
Sbjct: 81  LSASWDKTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 19  SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
           S+   +G+P L ++ SR    I          F   VR F GH H + +      D    
Sbjct: 22  SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 80
Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           LS S D TLRLW++ T      F    GH+ +V+S D D   + I+S   D ++K+W +
Sbjct: 81  LSASWDKTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 19  SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
           S+   +G+P L ++ SR    I          F   VR F GH H + +      D    
Sbjct: 16  SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 74
Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           LS S D TLRLW++ T      F    GH+ +V+S D D   + I+S   D ++K+W +
Sbjct: 75  LSASWDKTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 130

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 19  SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
           S+   +G+P L ++ SR    I          F   VR F GH H + +      D    
Sbjct: 22  SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 80
Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           LS S D TLRLW++ T      F    GH+ +V+S D D   + I+S   D ++K+W +
Sbjct: 81  LSASWDKTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 19  SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
           S+   +G+P L ++ SR    I          F   VR F GH H + +      D    
Sbjct: 22  SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 80
Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           LS S D TLRLW++ T      F    GH+ +V S D D   + I+S   D ++K+W +
Sbjct: 81  LSASWDKTLRLWDVATGETYQRF---VGHKSDVXSVDIDKKASXIISGSRDKTIKVWTI 136

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 33/206 (16%)
Query: 50  RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
           +   GH H +++L    Q+    +S S D TLRLW+++T      F    GH+ EV S  
Sbjct: 70  KALTGHNHFVSDLALS-QENCFAISSSWDKTLRLWDLRTGTTYKRF---VGHQSEVYSVA 125
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
           F     +I+S G +  +KLW++   E K + AE                         ++
Sbjct: 126 FSPDNRQILSAGAEREIKLWNILG-ECKFSSAE-------------------------KE 159
Query: 170 IHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF 229
            H ++V CVR+    + S +       +      D  L+   TN  I  R  FK  E   
Sbjct: 160 NHSDWVSCVRY-SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQI--RYTFKAHESNV 216
Query: 230 IRFSMDYWQKILAVGNQSGRTYVWDL 255
              S+    K +A G +  +  +WD+
Sbjct: 217 NHLSISPNGKYIATGGKDKKLLIWDI 242

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 39/175 (22%)
Query: 50  RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
           R   GH   ++++     + N  +S S DH+LRLWN++   C   F    GH  +VLS  
Sbjct: 61  RRLEGHSAFVSDVALS-NNGNFAVSASWDHSLRLWNLQNGQCQYKF---LGHTKDVLSVA 116
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
           F     +I+S G D++L++W+     +K  C  +                       +R 
Sbjct: 117 FSPDNRQIVSGGRDNALRVWN-----VKGECMHTL----------------------SRG 149
Query: 170 IHRNYVDCVRWL----GDFVLSKSCENCIICW--KPGRL-EDKELRTNE-TNVTI 216
            H ++V CVR+        ++S   +N +  W    GRL  D +  TN  T+VT+
Sbjct: 150 AHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTV 204

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 93/240 (38%), Gaps = 48/240 (20%)
Query: 44  AFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD 103
           A+    R   GH H + ++     D    LS S D  LRLW++   +    F    GH  
Sbjct: 418 AYGVAQRRLTGHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLAAGVSTRRF---VGHTK 473
Query: 104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163
           +VLS  F L   +I+S   D ++KLW+ T  E K   +E                     
Sbjct: 474 DVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISEG-------------------- 512
Query: 164 QFSTRDIHRNYVDCVRW----LGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR 219
                + HR++V CVR+    L   ++S S +  +  W            N +N  + + 
Sbjct: 513 ----GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW------------NLSNCKLRST 556
Query: 220 LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL-DVQDPSSIKFQILSHPRCMSAVR 278
           L      +  +  S D    + A G + G   +WDL + +   S++   + H  C S  R
Sbjct: 557 LAGHTGYVSTVAVSPD--GSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNR 614

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 28  LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
           +++ +G R  I++++ +    VR   GH   I  L++  +   L++S S D+T+RLW+I+
Sbjct: 269 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 324
Query: 88  TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN 147
              C+ +    EGH + V    FD    +I+S   D  +K+WDL       A A +    
Sbjct: 325 CGACLRVL---EGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 379
Query: 148 P--ARSTRPFDTQKEHFPQFST 167
                S R F  Q + F   S+
Sbjct: 380 TLVEHSGRVFRLQFDEFQIVSS 401

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 80/301 (26%)
Query: 17  AWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV 75
            WS  +   R  + ++GS    +++++     C+   YGH   +  +  H +    ++S 
Sbjct: 162 VWSSQM---RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR---VVSG 215
Query: 76  SKDHTLRLWNIKTDICIAIFGG-------------------------------------V 98
           S+D TLR+W+I+T  C+ +  G                                     +
Sbjct: 216 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 275
Query: 99  EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL----------------TKPEIKDACAE 142
           +GH + V S  FD  G  ++S  +D S+++WD+                +  E+KD    
Sbjct: 276 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILV 333
Query: 143 SYTFNPARSTRPFDTQKEHFPQ-FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGR 201
           S   N   + + +D +     Q     + H++ V C+++  +FV++ S +  +  W    
Sbjct: 334 S--GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW---- 387
Query: 202 LEDKELRTNETNVTIIN-RLNFKDCEIWFIRFSMDYWQKILAVGNQSG----RTYVWDLD 256
               +L+T E    ++          +W IR S    + + AVG+++G    +  V D D
Sbjct: 388 ----DLKTGEFIRNLVTLESGGSGGVVWRIRASNT--KLVCAVGSRNGTEETKLLVLDFD 441
Query: 257 V 257
           V
Sbjct: 442 V 442

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 37  VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFG 96
           +IR++       +    GH   +  LK+      +L+S S D T+R+W+IK   C  +F 
Sbjct: 143 MIRVYDSINKKFLLQLSGHDGGVWALKY--AHGGILVSGSTDRTVRVWDIKKGCCTHVF- 199
Query: 97  GVEGHRDEVLSADF-DLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP 154
             EGH   V   D  +    K I++   D++L +W L K        E + +        
Sbjct: 200 --EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV----- 252
Query: 155 FDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLE 203
           F T +E+         H   V  V   G+ V+S S +N +I W   +++
Sbjct: 253 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK 301

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 29  LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW---N 85
             + G +  I ++            GH   I+ L+F+  +  LLLS S D TLR+W   N
Sbjct: 220 FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGN 278
Query: 86  IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
             +  C        GH   ++SA + +   K++SC MD S++LW L +
Sbjct: 279 GNSQNCFY------GHSQSIVSASW-VGDDKVISCSMDGSVRLWSLKQ 319

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 46  HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD--ICIAIFGGVEGHRD 103
           + CV     H   +  + +HP    LL S S D T++L+  + D  +C A     EGH  
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATL---EGHES 195
Query: 104 EVLSADFDLLGTKIMSCGMDHSLKLW 129
            V S  FD  G ++ SC  D ++++W
Sbjct: 196 TVWSLAFDPSGQRLASCSDDRTVRIW 221

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 38  IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
           IR++       +    GH   +  LK+      +L+S S D T+R+W+IK   C  +F  
Sbjct: 144 IRVYDSINKKFLLQLSGHDGGVWALKY--AHGGILVSGSTDRTVRVWDIKKGCCTHVF-- 199
Query: 98  VEGHRDEVLSADF-DLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPF 155
            EGH   V   D  +    K I++   D++L +W L K        E + +        F
Sbjct: 200 -EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV-----F 253
Query: 156 DTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICW 197
            T +E+         H   V  V   G+ V+S S +N +I W
Sbjct: 254 HTPEENPYFVGVLRGHXASVRTVSGHGNIVVSGSYDNTLIVW 295

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 50  RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
           R   GH H ++++     D    LS S D TLRLW++ T      F    GH  +VLS  
Sbjct: 57  RALRGHSHFVSDVVIS-SDGQFALSGSWDGTLRLWDLTTGTTTRRF---VGHTKDVLSVA 112
Query: 110 FDLLGTKIMSCGMDHSLKLWD 130
           F     +I+S   D ++KLW+
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWN 133

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 50  RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
           R   GH H ++++     D    LS S D TLRLW++ T      F    GH  +VLS  
Sbjct: 80  RALRGHSHFVSDVVI-SSDGQFALSGSWDGTLRLWDLTTGTTTRRF---VGHTKDVLSVA 135
Query: 110 FDLLGTKIMSCGMDHSLKLWD 130
           F     +I+S   D ++KLW+
Sbjct: 136 FSSDNRQIVSGSRDKTIKLWN 156

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 49  VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSA 108
           ++   GH  ++N + F P D   + S S D T++LWN    +   +     GH   V   
Sbjct: 255 LQTLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLWNRNGQLLQTL----TGHSSSVWGV 309
Query: 109 DFDLLGTKIMSCGMDHSLKLWD 130
            F   G  I S   D ++KLW+
Sbjct: 310 AFSPDGQTIASASDDKTVKLWN 331

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 16  CAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA-------CVRHFYGHGHAINELKFHP 66
           C W M+         +A  G  +   IF+ +  A         R   GH    +  ++ P
Sbjct: 108 CPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVP 167
Query: 67  QDFNLLLSVSKDHTLRLWNIKTDICIAIFGG--VEGHRDEVLSADFDLLGTKIMSCGM-D 123
                L++ S D T  LW++ T   I+IFG     GH  +VLS   + L   +   G  D
Sbjct: 168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD 227
Query: 124 HSLKLWDL 131
            +++LWDL
Sbjct: 228 TTVRLWDL 235

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 10  EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
           E++ Y+  +     SG  L++ +G R V RI+      C          +  +   P D 
Sbjct: 165 EQDIYSLDY---FPSGDKLVSGSGDRTV-RIWDLRTGQCSLTLSIE-DGVTTVAVSPGDG 219
Query: 70  NLLLSVSKDHTLRLWNIKTDICIAIFGGVE----GHRDEVLSADFDLLGTKIMSCGMDHS 125
             + + S D  +R+W+ +T   +           GH+D V S  F   G  ++S  +D S
Sbjct: 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279
Query: 126 LKLWDL 131
           +KLW+L
Sbjct: 280 VKLWNL 285

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 54  GHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
           G    +N + ++P  D   +++ S D T+++W+ +T  C+A    +EGH   V  A F  
Sbjct: 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT---LEGHMSNVSFAVFHP 238
Query: 113 LGTKIMSCGMDHSLKLWD 130
               I+S   D +LK+W+
Sbjct: 239 TLPIIISGSEDGTLKIWN 256

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 54  GHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
           G    +N + ++P  D   +++ S D T+++W+ +T  C+A    +EGH   V  A F  
Sbjct: 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT---LEGHMSNVSFAVFHP 238
Query: 113 LGTKIMSCGMDHSLKLWD 130
               I+S   D +LK+W+
Sbjct: 239 TLPIIISGSEDGTLKIWN 256

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 23  ESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
           +S   LLA   +   ++++      C    +GH +++N  +F P D  LL S S D TLR
Sbjct: 710 KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLR 768
Query: 83  LWNIKT 88
           LW++++
Sbjct: 769 LWDVRS 774

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 23  ESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
           +S   LLA   +   ++++      C    +GH +++N  +F P D  LL S S D TLR
Sbjct: 717 KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLR 775
Query: 83  LWNIKT 88
           LW++++
Sbjct: 776 LWDVRS 781

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL- 106
           CV+ F  H   +N ++++P   +   S S D T RL++++ D  +AI+      ++ ++ 
Sbjct: 232 CVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADREVAIYS-----KESIIF 285
Query: 107 ---SADFDLLGTKIMSCGMDHSLKLWDLTK 133
              S DF L G  + +   D+++ +WD+ K
Sbjct: 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLK 315

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 54  GHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
           G    +N + ++P  D   +++ S D T+++W+ +T  C+A    +EGH   V  A F  
Sbjct: 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT---LEGHMSNVSFAVFHP 238
Query: 113 LGTKIMSCGMDHSLKLWDLTKPEIK 137
               I+S   D +LK+W+ +  +++
Sbjct: 239 TLPIIISGSEDGTLKIWNSSTYKVE 263

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.98
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.98
3jro_A	753	Fusion protein of protein transport protein SEC13	99.98
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.93
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.92
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.92
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.92
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.92
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.91
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.91
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.91
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.9
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.89
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.89
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.89
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.88
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.88
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.87
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.87
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.86
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.86
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.85
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.84
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.84
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.83
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.83
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.82
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.81
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.8
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.79
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.79
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.79
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.78
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.78
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.77
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.76
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.75
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.75
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.74
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.74
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.73
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.73
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.72
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.71
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.71
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.71
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.7
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.69
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.69
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.69
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.68
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.66
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.64
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.64
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.64
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.63
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.62
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.62
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.6
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.57
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.57
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.57
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.57
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.57
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.56
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.55
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.55
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.54
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.53
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.52
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.52
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.51
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.51
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.49
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.49
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.48
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.46
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.45
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.44
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.4
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.38
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.37
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.33
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.32
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.3
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.28
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.26
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.22
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.2
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.2
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.2
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.2
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.2
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.16
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.16
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.15
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.13
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.13
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.12
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.09
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.08
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.08
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.07
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.04
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.03
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.01
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.01
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.01
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.99
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.99
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.98
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.98
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.97
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.95
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.84
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.83
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.77
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.74
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.7
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.7
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.7
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.64
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.62
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.59
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.56
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.56
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.55
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.54
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.53
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.52
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.48
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.44
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.43
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.41
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.39
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.34
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.33
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.31
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.29
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.27
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.26
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.25
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.22
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.16
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.13
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.13
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.12
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.1
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.05
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.93
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.88
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.87
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.82
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.8
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.78
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.75
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.75
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.74
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.67
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.67
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.67
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.65
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.63
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.61
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.6
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.57
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.56
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.54
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.49
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.47
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.46
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.46
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.42
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.35
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.34
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.33
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.31
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.28
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.24
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.18
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.18
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.1
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.07
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.06
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.73
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.65
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.29
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.14
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.07
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.06
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.04
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.01
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.88
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.75
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.69
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	95.62
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	95.61
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	94.52
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	93.98
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	93.48
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	93.46
3ott_A	758	Two-component system sensor histidine kinase; beta	93.13
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	92.66
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	92.51
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	92.15
3ott_A	758	Two-component system sensor histidine kinase; beta	91.51
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	89.77
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	89.21
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	89.17
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	89.15
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	88.92
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	88.69
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	88.26
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	87.56
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	87.36
3kci_A	389	Probable E3 ubiquitin-protein ligase HERC2; WD40,	86.66
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	86.26
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	80.96
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	80.83

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.8e-44  Score=279.94  Aligned_cols=234  Identities=15%  Similarity=0.177  Sum_probs=203.4

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ...|.+.|++++|+|++    ++|++|+.||.|++||+++++.+..+..|..+|.+++|+| ++++|++|+.|++|++||
T Consensus         9 ~~~h~~~V~~~~fsp~~----~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd   83 (304)
T 2ynn_A            9 FSNRSDRVKGIDFHPTE----PWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFN   83 (304)
T ss_dssp             EEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEE
T ss_pred             ecCCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEE
Confidence            34688999999999999    5999999999999999999999999999999999999999 899999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.+++.+..+   .+|...|.+++|+|++++|++|+.|++|++||++++....                           
T Consensus        84 ~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~---------------------------  133 (304)
T 2ynn_A           84 YNTGEKVVDF---EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE---------------------------  133 (304)
T ss_dssp             TTTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE---------------------------
T ss_pred             CCCCcEEEEE---eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh---------------------------
Confidence            9999998888   7999999999999999999999999999999998763221                           


Q ss_pred             ccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        166 STRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                      ..+.+|...|.+++|+   +.+|++|+.|++|++||++.....           ......+...+..+.+.+.+++.+|+
T Consensus       134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~l~  202 (304)
T 2ynn_A          134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-----------FTLTTGQERGVNYVDYYPLPDKPYMI  202 (304)
T ss_dssp             EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS-----------EEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred             hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc-----------ceeccCCcCcEEEEEEEEcCCCCEEE
Confidence            1224589999999997   468999999999999999876542           22334556778888888888899999


Q ss_pred             EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        243 VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|+.||+|++||++++++    ...  ..+|...|.+++|+|++++|++
T Consensus       203 s~s~D~~i~iWd~~~~~~----~~~--~~~h~~~v~~~~~~p~~~~l~s  245 (304)
T 2ynn_A          203 TASDDLTIKIWDYQTKSC----VAT--LEGHMSNVSFAVFHPTLPIIIS  245 (304)
T ss_dssp             EEETTSEEEEEETTTTEE----EEE--EECCSSCEEEEEECSSSSEEEE
T ss_pred             EEcCCCeEEEEeCCCCcc----cee--eCCCCCCEEEEEECCCCCEEEE
Confidence            999999999999998742    233  3478899999999999998874

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=285.05  Aligned_cols=229  Identities=14%  Similarity=0.197  Sum_probs=193.2

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE----EeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH----FYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ...++..|++++|+|++     .|++|+.||+|+|||+++++.+..    +.+|.+.|++++|+| ++++|++|+.|++|
T Consensus        78 ~~~~~~~v~~~~~s~d~-----~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i  151 (344)
T 4gqb_B           78 GVQTEAGVADLTWVGER-----GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICI  151 (344)
T ss_dssp             EEEESSCEEEEEEETTT-----EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred             eeccCCCEEEEEEeCCC-----eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeE
Confidence            34567889999999986     899999999999999998876544    348999999999999 99999999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      ++||+++++.+..+   .+|...|.+++|+|++. +|++++.|++|++||+++++....+..                  
T Consensus       152 ~iwd~~~~~~~~~~---~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~------------------  210 (344)
T 4gqb_B          152 KVWDLAQQVVLSSY---RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC------------------  210 (344)
T ss_dssp             EEEETTTTEEEEEE---CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------------------
T ss_pred             EEEECCCCcEEEEE---cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec------------------
Confidence            99999999999888   79999999999999985 789999999999999998876554321                  


Q ss_pred             cCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                              ..|...+.+++|+   +++|++|+.|++|++||+++.+.            +..+.+|...|..++|+  |+
T Consensus       211 --------~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~------------~~~~~~h~~~v~~v~fs--p~  268 (344)
T 4gqb_B          211 --------SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC------------VLSSAVHSQCVTGLVFS--PH  268 (344)
T ss_dssp             -----------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C------------CEEEECCSSCEEEEEEC--SS
T ss_pred             --------ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE------------EEEEcCCCCCEEEEEEc--cC
Confidence                    1255678899997   45899999999999999998754            78888999988877665  55


Q ss_pred             C-cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        238 Q-KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       238 ~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      + ++|++|+.||+|+|||+.+++       .+...+|.+.|++++|+|+++.|+
T Consensus       269 g~~~lasgs~D~~i~vwd~~~~~-------~~~~~~H~~~V~~v~~sp~~~~ll  315 (344)
T 4gqb_B          269 SVPFLASLSEDCSLAVLDSSLSE-------LFRSQAHRDFVRDATWSPLNHSLL  315 (344)
T ss_dssp             SSCCEEEEETTSCEEEECTTCCE-------EEEECCCSSCEEEEEECSSSTTEE
T ss_pred             CCeEEEEEeCCCeEEEEECCCCc-------EEEEcCCCCCEEEEEEeCCCCeEE
Confidence            7 689999999999999998873       334458999999999999997654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=8e-44  Score=284.19  Aligned_cols=283  Identities=63%  Similarity=1.219  Sum_probs=246.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      |.+.|++++|+|+...++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|.++.+|++|+.||.|++||+++
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~  147 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT  147 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence            56889999999997655679999999999999999999999999999999999999997789999999999999999999


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++.+..+..+..|...|.+++|+|++++|++++.||.|++||+++++....+.....+.|+.............+.+...
T Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (366)
T 3k26_A          148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR  227 (366)
T ss_dssp             TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred             CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence            98888775446899999999999999999999999999999999999988888888888888888877777777788888


Q ss_pred             cccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcc--ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      .+|...|.+++|+++++++++.|+.|++||+++....  ...........+..+..|...+..+++++++++++|++|+.
T Consensus       228 ~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~  307 (366)
T 3k26_A          228 DIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ  307 (366)
T ss_dssp             SSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT
T ss_pred             cCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec
Confidence            8899999999999999999999999999999876542  22233334456788888888888888887777999999999


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ||.|++||+.+++........+....|...|++++|+|++++|++
T Consensus       308 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  352 (366)
T 3k26_A          308 VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA  352 (366)
T ss_dssp             TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred             CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEE
Confidence            999999999998765544455554444789999999999999974

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.5e-43  Score=283.96  Aligned_cols=231  Identities=20%  Similarity=0.293  Sum_probs=204.7

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|..+|++++|+|++    .+|++|+.||+|++||+.+++....+.+|.+.|.+++|+| ++.+|++|+.|++|++||+
T Consensus       105 ~gh~~~V~~~~~~p~~----~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~  179 (410)
T 1vyh_C          105 SGHRSPVTRVIFHPVF----SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDF  179 (410)
T ss_dssp             ECCSSCEEEEEECSSS----SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEET
T ss_pred             cccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeC
Confidence            3588999999999998    4999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .+++++..+   .+|...|.+++|+|++.+|++|+.|++|++||++++..+..+                          
T Consensus       180 ~~~~~~~~~---~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~--------------------------  230 (410)
T 1vyh_C          180 QGFECIRTM---HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--------------------------  230 (410)
T ss_dssp             TSSCEEECC---CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE--------------------------
T ss_pred             CCCceeEEE---cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE--------------------------
Confidence            999888887   799999999999999999999999999999999988765444                          


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC--------
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY--------  236 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------  236 (291)
                        .+|...|.++.|+  +.++++++.|++|++||+++.+.            ...+..|...+.+++++++.        
T Consensus       231 --~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~  296 (410)
T 1vyh_C          231 --TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC------------KAELREHRHVVECISWAPESSYSSISEA  296 (410)
T ss_dssp             --ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred             --eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce------------eeEecCCCceEEEEEEcCcccccchhhh
Confidence              3488899999998  77999999999999999988744            67778888888888776532        


Q ss_pred             ----------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 ----------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 ----------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                                .+.+|++|+.||.|++||+.++++    ...  ..+|...|++++|+|+|++|++
T Consensus       297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~----~~~--~~~h~~~v~~v~~~~~g~~l~s  355 (410)
T 1vyh_C          297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LMT--LVGHDNWVRGVLFHSGGKFILS  355 (410)
T ss_dssp             CSCC-------CCEEEEEETTSEEEEEETTTTEE----EEE--EECCSSCEEEEEECSSSSCEEE
T ss_pred             ccccccccCCCCCEEEEEeCCCeEEEEECCCCce----EEE--EECCCCcEEEEEEcCCCCEEEE
Confidence                      267999999999999999998742    233  3378899999999999999874

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.9e-42  Score=270.24  Aligned_cols=228  Identities=13%  Similarity=0.159  Sum_probs=202.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|.+++|++++    .++++++.|++|++||+++++.+..+..|...+.+++|+| ++++|++|+.||.|++||++
T Consensus        78 gh~~~v~~~~~~~~~----~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~  152 (321)
T 3ow8_A           78 GHQLGVVSVDISHTL----PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVE  152 (321)
T ss_dssp             CCSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETT
T ss_pred             cCCCCEEEEEECCCC----CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcC
Confidence            478899999999998    5999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++....+   ..|...|.+++|+|++++|++|+.||.|++||+++++.+..+                           
T Consensus       153 ~~~~~~~~---~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~---------------------------  202 (321)
T 3ow8_A          153 SGKKEYSL---DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL---------------------------  202 (321)
T ss_dssp             TCSEEEEE---ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---------------------------
T ss_pred             CCceeEEe---cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---------------------------
Confidence            99888877   688899999999999999999999999999999988765444                           


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                       .+|..+|.+++|+  +++|++++.|+.|++||++....            +..+.+|...|..++|+  |++++|++|+
T Consensus       203 -~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~------------~~~~~~h~~~v~~~~~s--p~~~~l~s~s  267 (321)
T 3ow8_A          203 -EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL------------AGTLSGHASWVLNVAFC--PDDTHFVSSS  267 (321)
T ss_dssp             -CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE------------EEEECCCSSCEEEEEEC--TTSSEEEEEE
T ss_pred             -cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce------------eEEEcCCCCceEEEEEC--CCCCEEEEEe
Confidence             3488899999998  77999999999999999987743            67788888888776655  6699999999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .||+|++||+.++++      .....+|...|.+++|+|+|++|++
T Consensus       268 ~D~~v~iwd~~~~~~------~~~~~~h~~~v~~v~~s~~g~~l~s  307 (321)
T 3ow8_A          268 SDKSVKVWDVGTRTC------VHTFFDHQDQVWGVKYNGNGSKIVS  307 (321)
T ss_dssp             TTSCEEEEETTTTEE------EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             CCCcEEEEeCCCCEE------EEEEcCCCCcEEEEEECCCCCEEEE
Confidence            999999999998742      2233478899999999999999874

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.3e-42  Score=269.93  Aligned_cols=232  Identities=10%  Similarity=0.190  Sum_probs=197.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|++++|+|+...++.+|++|+.|++|+||++.+++.  ...+.+|...|.+++|++ ++.++++++.|++|++||
T Consensus        30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd  108 (321)
T 3ow8_A           30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWD  108 (321)
T ss_dssp             SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred             cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence            58999999999998766668999999999999999977653  456789999999999999 889999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.+++.+..+   ..|...+.+++|+|++++|++++.||.|++||+++++....+.                        
T Consensus       109 ~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~------------------------  161 (321)
T 3ow8_A          109 LENGKQIKSI---DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD------------------------  161 (321)
T ss_dssp             TTTTEEEEEE---ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE------------------------
T ss_pred             CCCCCEEEEE---eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec------------------------
Confidence            9999988888   6888899999999999999999999999999999877544332                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                          .|...|.+++|+  +++|++++.|+.|++||+++++            .+..+.+|...+..++|+  |++++|++
T Consensus       162 ----~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~------------~~~~~~~h~~~v~~l~~s--pd~~~l~s  223 (321)
T 3ow8_A          162 ----TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK------------LLHTLEGHAMPIRSLTFS--PDSQLLVT  223 (321)
T ss_dssp             ----CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCCCEEEEC--TTSCEEEE
T ss_pred             ----CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------------EEEEEcccCCceeEEEEc--CCCCEEEE
Confidence                377789999998  7899999999999999998873            477888888888876655  66999999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+.||.|++||+.+++.      .....+|...|.+++|+|+|++|++
T Consensus       224 ~s~dg~i~iwd~~~~~~------~~~~~~h~~~v~~~~~sp~~~~l~s  265 (321)
T 3ow8_A          224 ASDDGYIKIYDVQHANL------AGTLSGHASWVLNVAFCPDDTHFVS  265 (321)
T ss_dssp             ECTTSCEEEEETTTCCE------EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             EcCCCeEEEEECCCcce------eEEEcCCCCceEEEEECCCCCEEEE
Confidence            99999999999998742      2233478899999999999999874

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.8e-41  Score=262.21  Aligned_cols=225  Identities=20%  Similarity=0.276  Sum_probs=192.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|..+|.+++|+|++    ++|++|+.|+.|++||+++++.+..+.+|.+.|.+++|+| ++.+|++|+.|++|++||++
T Consensus        53 ~~~~~v~~~~~~~~~----~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~  127 (304)
T 2ynn_A           53 VTETPVRAGKFIARK----NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWE  127 (304)
T ss_dssp             CCSSCEEEEEEEGGG----TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGG
T ss_pred             ccCCcEEEEEEeCCC----CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECC
Confidence            467899999999999    4999999999999999999999999999999999999999 88999999999999999998


Q ss_pred             Ccce-eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         88 TDIC-IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        88 ~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ++.. ...+   .+|...|.+++|+| ++.+|++|+.|++|++||+++......+.                        
T Consensus       128 ~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~------------------------  180 (304)
T 2ynn_A          128 NNWALEQTF---EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT------------------------  180 (304)
T ss_dssp             GTTEEEEEE---CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEE------------------------
T ss_pred             CCcchhhhh---cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceec------------------------
Confidence            7744 4455   78999999999999 57899999999999999998765432221                        


Q ss_pred             ccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        166 STRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                         ..|...+..+.|.    +.+|++++.|++|++||+++.            ..+..+.+|...+..+.+.  |++.+|
T Consensus       181 ---~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~------------~~~~~~~~h~~~v~~~~~~--p~~~~l  243 (304)
T 2ynn_A          181 ---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK------------SCVATLEGHMSNVSFAVFH--PTLPII  243 (304)
T ss_dssp             ---CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT------------EEEEEEECCSSCEEEEEEC--SSSSEE
T ss_pred             ---cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC------------ccceeeCCCCCCEEEEEEC--CCCCEE
Confidence               2366778888886    459999999999999999887            4478889999888876655  669999


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                      ++|+.||+|++||+.+++.    ...+  ..|...+.+++|+|++.
T Consensus       244 ~s~s~Dg~i~iWd~~~~~~----~~~~--~~~~~~~~~~~~~~~~~  283 (304)
T 2ynn_A          244 ISGSEDGTLKIWNSSTYKV----EKTL--NVGLERSWCIATHPTGR  283 (304)
T ss_dssp             EEEETTSCEEEEETTTCCE----EEEE--CCSSSSEEEEEECTTCG
T ss_pred             EEEcCCCeEEEEECCCCce----eeec--cCCCccEEEEEECCCCC
Confidence            9999999999999998752    2333  35678999999999886

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.1e-42  Score=278.34  Aligned_cols=228  Identities=23%  Similarity=0.403  Sum_probs=201.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    .+|++|+.||+|++||+.+++++..+.+|...|.+++|+| ++.+|++|+.|++|++||++
T Consensus       148 ~h~~~V~~v~~~~~~----~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~  222 (410)
T 1vyh_C          148 GHTDSVQDISFDHSG----KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQ  222 (410)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETT
T ss_pred             ccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECC
Confidence            478999999999998    5999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ++.++..+   .+|...|.++.|+|++.+|++|+.|+.|++||+++++....+.                          
T Consensus       223 ~~~~~~~~---~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~--------------------------  273 (410)
T 1vyh_C          223 TGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR--------------------------  273 (410)
T ss_dssp             TCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------------
T ss_pred             CCcEEEEE---eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec--------------------------
Confidence            99998888   7999999999999999999999999999999999887554432                          


Q ss_pred             ccccCcceeEEEEc----------------------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        168 RDIHRNYVDCVRWL----------------------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       168 ~~~~~~~v~~~~~~----------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                        .|...|.+++|+                      +.+|++|+.|+.|++||++++.            .+..+.+|..
T Consensus       274 --~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~------------~~~~~~~h~~  339 (410)
T 1vyh_C          274 --EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM------------CLMTLVGHDN  339 (410)
T ss_dssp             --CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE------------EEEEEECCSS
T ss_pred             --CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc------------eEEEEECCCC
Confidence              367777777775                      3489999999999999998874            4778888988


Q ss_pred             cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|..+.+  +|++++|++|+.||.|++||+.+++++    ..+  .+|...|++++|+|++++|++
T Consensus       340 ~v~~v~~--~~~g~~l~s~s~D~~i~vwd~~~~~~~----~~~--~~h~~~v~~l~~~~~~~~l~s  397 (410)
T 1vyh_C          340 WVRGVLF--HSGGKFILSCADDKTLRVWDYKNKRCM----KTL--NAHEHFVTSLDFHKTAPYVVT  397 (410)
T ss_dssp             CEEEEEE--CSSSSCEEEEETTTEEEEECCTTSCCC----EEE--ECCSSCEEEEEECSSSSCEEE
T ss_pred             cEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCceE----EEE--cCCCCcEEEEEEcCCCCEEEE
Confidence            8877665  466999999999999999999887643    333  368889999999999999874

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=5e-41  Score=266.81  Aligned_cols=231  Identities=17%  Similarity=0.228  Sum_probs=190.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE------------------------------------
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR------------------------------------   50 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~------------------------------------   50 (291)
                      ..|.+.|++++|+|++    ++|++|+.||+|++||..+++...                                    
T Consensus        61 ~gH~~~V~~~~~s~d~----~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~  136 (354)
T 2pbi_B           61 KGHGNKVLCMDWCKDK----RRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT  136 (354)
T ss_dssp             ECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred             cCCCCeEEEEEECCCC----CEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence            3588999999999998    599999999999999987654332                                    


Q ss_pred             ------------EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc--CCCE
Q psy10348         51 ------------HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL--LGTK  116 (291)
Q Consensus        51 ------------~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~  116 (291)
                                  .+.+|...|.+++|+| ++..|++++.|++|++||+++++.+..+   .+|...|.+++|+|  ++++
T Consensus       137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~g~~  212 (354)
T 2pbi_B          137 FDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSF---HGHGADVLCLDLAPSETGNT  212 (354)
T ss_dssp             CCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEE---ECCSSCEEEEEECCCSSCCE
T ss_pred             ccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE---cCCCCCeEEEEEEeCCCCCE
Confidence                        3445778888999999 8889999999999999999999998888   79999999999988  4689


Q ss_pred             EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348        117 IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCI  194 (291)
Q Consensus       117 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i  194 (291)
                      |++|+.||.|++||+++++.+..+                            .+|...|.+++|+  +++|++++.|++|
T Consensus       213 l~sgs~Dg~v~~wd~~~~~~~~~~----------------------------~~h~~~v~~v~~~p~~~~l~s~s~D~~v  264 (354)
T 2pbi_B          213 FVSGGCDKKAMVWDMRSGQCVQAF----------------------------ETHESDVNSVRYYPSGDAFASGSDDATC  264 (354)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEE----------------------------CCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEe----------------------------cCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence            999999999999999988765443                            3489999999998  7799999999999


Q ss_pred             EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348        195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM  274 (291)
Q Consensus       195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~  274 (291)
                      ++||++....            +..+..+........++++|++++|++|+.|+.|++||+.+++.      .....+|.
T Consensus       265 ~lwd~~~~~~------------~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~------~~~l~~h~  326 (354)
T 2pbi_B          265 RLYDLRADRE------------VAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR------VSILFGHE  326 (354)
T ss_dssp             EEEETTTTEE------------EEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE------EEEECCCS
T ss_pred             EEEECCCCcE------------EEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce------EEEEECCC
Confidence            9999987643            33333332212233455667799999999999999999988752      22334788


Q ss_pred             cceeeeEEccCCceeeC
Q psy10348        275 SAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       275 ~~v~~~~~s~~g~~l~s  291 (291)
                      +.|++++|+|||++|++
T Consensus       327 ~~v~~l~~spdg~~l~s  343 (354)
T 2pbi_B          327 NRVSTLRVSPDGTAFCS  343 (354)
T ss_dssp             SCEEEEEECTTSSCEEE
T ss_pred             CcEEEEEECCCCCEEEE
Confidence            99999999999999875

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=4.4e-41  Score=263.57  Aligned_cols=227  Identities=24%  Similarity=0.305  Sum_probs=193.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      .|.+.|++++|+|++.   .+|++|+.|++|++|++..     +.++..+.+|...|.+++|+| ++.+|++|+.|++|+
T Consensus        15 gH~~~V~~l~~~~~~~---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~   90 (319)
T 3frx_A           15 GHNGWVTSLATSAGQP---NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLR   90 (319)
T ss_dssp             CCSSCEEEEEECSSCT---TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred             cccceEEEEEccCCCc---cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEE
Confidence            5899999999999753   5999999999999999864     345678899999999999999 999999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +||+.+++.+..+   .+|...|.+++|+|++.+|++|+.|++|++||++... +.                        
T Consensus        91 ~wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-~~------------------------  142 (319)
T 3frx_A           91 LWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LA------------------------  142 (319)
T ss_dssp             EEETTTTEEEEEE---ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-EE------------------------
T ss_pred             EEECCCCCeeEEE---ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EE------------------------
Confidence            9999999998888   7999999999999999999999999999999986432 21                        


Q ss_pred             cccccccccCcceeEEEEcC--------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        163 PQFSTRDIHRNYVDCVRWLG--------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~~--------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                          ...+|...|.++.|.+        ..+++++.|+.|++||++..+            ....+.+|...+..++++ 
T Consensus       143 ----~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~------------~~~~~~~h~~~v~~~~~s-  205 (319)
T 3frx_A          143 ----TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ------------IEADFIGHNSNINTLTAS-  205 (319)
T ss_dssp             ----EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE------------EEEEECCCCSCEEEEEEC-
T ss_pred             ----EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch------------hheeecCCCCcEEEEEEc-
Confidence                2235888899999962        379999999999999998763            367788898888876655 


Q ss_pred             cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                       |++++|++|+.||.|++||+.+++.    ...+.   +...|.+++|+|++.+|++
T Consensus       206 -p~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~---~~~~v~~~~~sp~~~~la~  254 (319)
T 3frx_A          206 -PDGTLIASAGKDGEIMLWNLAAKKA----MYTLS---AQDEVFSLAFSPNRYWLAA  254 (319)
T ss_dssp             -TTSSEEEEEETTCEEEEEETTTTEE----EEEEE---CCSCEEEEEECSSSSEEEE
T ss_pred             -CCCCEEEEEeCCCeEEEEECCCCcE----EEEec---CCCcEEEEEEcCCCCEEEE
Confidence             6699999999999999999998742    23333   3468999999999998874

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2e-41  Score=269.39  Aligned_cols=229  Identities=17%  Similarity=0.223  Sum_probs=187.3

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE----EEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR----HFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ..|...|++++|+|++     .+++++.||+|+|||+.+++...    ...+|...|.+++|+| ++++|++|+.|+.|+
T Consensus        91 ~~~~~~V~~~~~s~d~-----~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~  164 (357)
T 4g56_B           91 VQTEAGVTDVAWVSEK-----GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVK  164 (357)
T ss_dssp             EECSSCEEEEEEETTT-----EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEE
T ss_pred             CCCCCCEEEEEEcCCC-----CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEE
Confidence            4678899999999987     67778889999999998876432    3447999999999999 999999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      +||+++++.+..+   .+|...|.+++|+|++. ++++++.|+.|++||+++++....+.                    
T Consensus       165 iwd~~~~~~~~~~---~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~--------------------  221 (357)
T 4g56_B          165 VWDLSQKAVLKSY---NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID--------------------  221 (357)
T ss_dssp             EEETTTTEEEEEE---CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC--------------------
T ss_pred             EEECCCCcEEEEE---cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee--------------------
Confidence            9999999999888   79999999999999875 78999999999999999887543322                    


Q ss_pred             CcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                            ...|...+.+++|+   +.+|++|+.|+.|++||+++.+.            +..+..+...|..++|+  |++
T Consensus       222 ------~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~------------~~~~~~~~~~v~~l~~s--p~~  281 (357)
T 4g56_B          222 ------FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS------------AQTSAVHSQNITGLAYS--YHS  281 (357)
T ss_dssp             ------CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG------------CEEECCCSSCEEEEEEC--SSS
T ss_pred             ------eccccccccchhhhhcccceEEEeecccceeEEECCCCcE------------eEEEeccceeEEEEEEc--CCC
Confidence                  12367789999997   45899999999999999988754            67788888888877665  546


Q ss_pred             -cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceeeC
Q psy10348        239 -KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLLC  291 (291)
Q Consensus       239 -~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~s  291 (291)
                       ++||+|+.||+|+|||+.+++       .+...+|.+.|++++|+| |+++|++
T Consensus       282 ~~~lasgs~D~~i~iwd~~~~~-------~~~~~~H~~~V~~vafsP~d~~~l~s  329 (357)
T 4g56_B          282 SPFLASISEDCTVAVLDADFSE-------VFRDLSHRDFVTGVAWSPLDHSKFTT  329 (357)
T ss_dssp             SCCEEEEETTSCEEEECTTSCE-------EEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCc-------EeEECCCCCCEEEEEEeCCCCCEEEE
Confidence             689999999999999998873       223347889999999998 7888874

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=9.5e-41  Score=263.99  Aligned_cols=229  Identities=18%  Similarity=0.233  Sum_probs=197.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    ++|++|+.||+|++||..+++.+..+..|...|.+++|+| ++.+|++|+.|+.|++|++.
T Consensus        53 gH~~~v~~~~~s~d~----~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~  127 (340)
T 1got_B           53 GHLAKIYAMHWGTDS----RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLK  127 (340)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETT
T ss_pred             CCCCceEEEEECCCC----CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECc
Confidence            578999999999998    5999999999999999999999999999999999999999 89999999999999999998


Q ss_pred             Ccc----eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         88 TDI----CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        88 ~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ++.    ....+   .+|...|.++.|++++. +++++.|+.|++||+++++....+                       
T Consensus       128 ~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~-----------------------  180 (340)
T 1got_B          128 TREGNVRVSREL---AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTF-----------------------  180 (340)
T ss_dssp             TCSBSCEEEEEE---ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEE-----------------------
T ss_pred             cCCCcceeEEEe---cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEE-----------------------
Confidence            653    23334   78999999999998774 899999999999999988765443                       


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                           .+|...|.+++|+  ++++++|+.|+.|++||+++...            +..+..|...|..++++  |++++|
T Consensus       181 -----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~------------~~~~~~h~~~v~~v~~~--p~~~~l  241 (340)
T 1got_B          181 -----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC------------RQTFTGHESDINAICFF--PNGNAF  241 (340)
T ss_dssp             -----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE------------EEEECCCSSCEEEEEEC--TTSSEE
T ss_pred             -----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee------------EEEEcCCcCCEEEEEEc--CCCCEE
Confidence                 3488999999998  67999999999999999988744            77888888888876665  669999


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|+.||+|++||+++++    ....+.+..+...|.+++|+|+|++|++
T Consensus       242 ~s~s~d~~v~iwd~~~~~----~~~~~~~~~~~~~v~~~~~s~~g~~l~~  287 (340)
T 1got_B          242 ATGSDDATCRLFDLRADQ----ELMTYSHDNIICGITSVSFSKSGRLLLA  287 (340)
T ss_dssp             EEEETTSCEEEEETTTTE----EEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred             EEEcCCCcEEEEECCCCc----EEEEEccCCcccceEEEEECCCCCEEEE
Confidence            999999999999999874    2234444455568999999999999874

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1e-40  Score=258.96  Aligned_cols=243  Identities=17%  Similarity=0.193  Sum_probs=194.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--cceeEEEeeeccceeEEEEecC-CCcEEEEeecCCeEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--HACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRL   83 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~v   83 (291)
                      ..|.+.|++++|+|++    ++||+|+.|++|+|||+++  .+.+..+.+|.++|.+++|++. ++++|++|+.|++|++
T Consensus         6 ~~h~~~V~~~~~s~~g----~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i   81 (297)
T 2pm7_B            6 NAHNEMIHDAVMDYYG----KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI   81 (297)
T ss_dssp             CSCSSCEEEEEECTTS----SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred             cCCcCceEEEEECCCC----CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence            3689999999999998    5999999999999999974  4678899999999999999862 3789999999999999


Q ss_pred             EECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         84 WNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        84 wd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      ||+++++  .+..+   ..|...|.+++|+|+  +.+|++++.|+.|++||++++....                     
T Consensus        82 Wd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~---------------------  137 (297)
T 2pm7_B           82 WKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS---------------------  137 (297)
T ss_dssp             EEBSSSCBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---------------------
T ss_pred             EEcCCCceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---------------------
Confidence            9998774  34444   689999999999997  8899999999999999998753210                     


Q ss_pred             ccCcccccccccCcceeEEEEcC---------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWLG---------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                           .....+|...|.+++|++               ++|++|+.|++|++||++.....        ......+.+|.
T Consensus       138 -----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~--------~~~~~~l~~H~  204 (297)
T 2pm7_B          138 -----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------YVLESTLEGHS  204 (297)
T ss_dssp             -----CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE--------EEEEEEECCCS
T ss_pred             -----eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce--------EEEEEEecCCC
Confidence                 011245888899999973               48999999999999998765421        02356788899


Q ss_pred             ccEEEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        225 CEIWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       225 ~~i~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..|..++|+++. .+.+|++|+.|++|++||+.+.... .....+....|...|.+++|+|+|++||+
T Consensus       205 ~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~las  271 (297)
T 2pm7_B          205 DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP-WKKTLLKEEKFPDVLWRASWSLSGNVLAL  271 (297)
T ss_dssp             SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-CEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred             CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc-cceeeeecccCCCcEEEEEECCCCCEEEE
Confidence            988887776431 1489999999999999999875321 11123323467789999999999999874

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2e-40  Score=262.20  Aligned_cols=227  Identities=20%  Similarity=0.274  Sum_probs=192.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .|...|.+++|+|++    .+|++|+.|+.|++|++.++    +....+.+|.+.|.++.|++ ++ .+++++.|+.|++
T Consensus        95 ~~~~~v~~~~~s~~~----~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~  168 (340)
T 1got_B           95 LRSSWVMTCAYAPSG----NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCAL  168 (340)
T ss_dssp             CSSSCEEEEEECTTS----SEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEE
T ss_pred             cCCccEEEEEECCCC----CEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEE
Confidence            467889999999998    49999999999999999865    35567789999999999998 65 4899999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ||+++++.+..+   .+|...|.+++|+|++++|++|+.|+.|++||++++.....+                       
T Consensus       169 wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~-----------------------  222 (340)
T 1got_B          169 WDIETGQQTTTF---TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-----------------------  222 (340)
T ss_dssp             EETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-----------------------
T ss_pred             EECCCCcEEEEE---cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE-----------------------
Confidence            999999988888   789999999999999999999999999999999987755443                       


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC--cccEEEEEEEecCCCc
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK--DCEIWFIRFSMDYWQK  239 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~  239 (291)
                           .+|...|.+++|+  +++|++++.|++|++||++..+.            +..+..+  ...+..  ++++|+++
T Consensus       223 -----~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~------------~~~~~~~~~~~~v~~--~~~s~~g~  283 (340)
T 1got_B          223 -----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE------------LMTYSHDNIICGITS--VSFSKSGR  283 (340)
T ss_dssp             -----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------EEEECCTTCCSCEEE--EEECTTSS
T ss_pred             -----cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE------------EEEEccCCcccceEE--EEECCCCC
Confidence                 3488999999998  77999999999999999987643            3333322  234554  45567799


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++|+.||.|++||+.+++.    ...  ..+|.++|.+++|+|+|++|++
T Consensus       284 ~l~~g~~d~~i~vwd~~~~~~----~~~--~~~h~~~v~~~~~s~dg~~l~s  329 (340)
T 1got_B          284 LLLAGYDDFNCNVWDALKADR----AGV--LAGHDNRVSCLGVTDDGMAVAT  329 (340)
T ss_dssp             EEEEEETTSEEEEEETTTCCE----EEE--EECCSSCEEEEEECTTSSCEEE
T ss_pred             EEEEECCCCeEEEEEcccCcE----eeE--eecCCCcEEEEEEcCCCCEEEE
Confidence            999999999999999988752    233  3478899999999999999875

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=2.9e-40  Score=258.33  Aligned_cols=258  Identities=19%  Similarity=0.322  Sum_probs=205.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    ++|++|+.||.|++|+..+++....+.+|...|.+++|+| ++++|++|+.|+.|++||++
T Consensus        21 gh~~~v~~~~~s~~~----~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~   95 (312)
T 4ery_A           21 GHTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS   95 (312)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             ccCCcEEEEEECCCC----CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECC
Confidence            578999999999998    5999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc------ccccCCCCccccccCcccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE------SYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  161 (291)
                      +++.+..+   .+|...|.+++|+|++++|++++.|+.|++||+++++....+..      .+.+.|++...........
T Consensus        96 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  172 (312)
T 4ery_A           96 SGKCLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL  172 (312)
T ss_dssp             TCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             CCcEEEEE---cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence            99988888   78999999999999999999999999999999998877655542      3445555443322221111


Q ss_pred             Cc---------ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348        162 FP---------QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       162 ~~---------~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                      ..         .......+...+..++|+  +++|++++.|+.|++||+++.+.            +..+..+......+
T Consensus       173 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~~~~~~~~~  240 (312)
T 4ery_A          173 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC------------LKTYTGHKNEKYCI  240 (312)
T ss_dssp             EEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE------------EEEECSSCCSSSCC
T ss_pred             EEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE------------EEEEEecCCceEEE
Confidence            10         111123456778889998  77999999999999999987743            56666665443333


Q ss_pred             EEEe-cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        231 RFSM-DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       231 ~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ...+ .+++.+|++|+.||.|++||+.+++.      .....+|...|.+++|+|++++|++
T Consensus       241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~------~~~~~~h~~~v~~~~~~p~~~~l~s  296 (312)
T 4ery_A          241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEI------VQKLQGHTDVVISTACHPTENIIAS  296 (312)
T ss_dssp             CEEEECSSSCEEEECCTTSCEEEEETTTCCE------EEEECCCSSCEEEEEECSSSSEEEE
T ss_pred             EEEEEeCCCcEEEEECCCCEEEEEECCCchh------hhhhhccCCcEEEEeecCcCCceEE
Confidence            2222 25689999999999999999998742      2233478899999999999999874

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.6e-40  Score=259.98  Aligned_cols=244  Identities=18%  Similarity=0.206  Sum_probs=186.6

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecC-CCcEEEEeecCCeE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTL   81 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i   81 (291)
                      ....|.+.|++++|+|++    ++||+|+.|++|+|||+++++  .+..+.+|.++|.+++|++. ++.+|++|+.|++|
T Consensus         8 ~~~~H~~~V~~v~~s~~g----~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v   83 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYG----TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV   83 (316)
T ss_dssp             ------CCEEEEEECGGG----CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred             ecccccCeEEEeeEcCCC----CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence            344789999999999998    599999999999999998764  46788999999999999862 47899999999999


Q ss_pred             EEEECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         82 RLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        82 ~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      ++||+++++  ....+   .+|...|.+++|+|+  +.+|++|+.|+.|++||++.+.....                  
T Consensus        84 ~iWd~~~~~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~------------------  142 (316)
T 3bg1_A           84 IIWREENGTWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV------------------  142 (316)
T ss_dssp             EEECCSSSCCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE------------------
T ss_pred             EEEECCCCcceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce------------------
Confidence            999998874  44455   689999999999998  78999999999999999986531100                  


Q ss_pred             ccccCcccccccccCcceeEEEEcC-------------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeee
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWLG-------------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN  218 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~~-------------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  218 (291)
                             .....+|...|.+++|++                   .+|++|+.|++|++||++.....         ..+.
T Consensus       143 -------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~---------~~~~  206 (316)
T 3bg1_A          143 -------KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW---------KEEQ  206 (316)
T ss_dssp             -------CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE---------EEEE
T ss_pred             -------eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc---------ceee
Confidence                   011124666777777762                   58999999999999998654221         2366


Q ss_pred             eecCCcccEEEEEEEecC--CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        219 RLNFKDCEIWFIRFSMDY--WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+.+|...|..++|+++.  ++.+|++|+.||+|++|++.+..........+.  .|...|.+++|+|+|++||+
T Consensus       207 ~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las  279 (316)
T 3bg1_A          207 KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAV  279 (316)
T ss_dssp             CCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEE
T ss_pred             ecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEE
Confidence            788898888877666431  138999999999999999987421111112222  46789999999999999874

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.6e-39  Score=275.80  Aligned_cols=270  Identities=16%  Similarity=0.204  Sum_probs=201.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++.   ..|++|+.|++|++||..+++.+..+.+|...|.+++|+| ++++|++|+.|++|++||+.
T Consensus       145 gh~~~v~~v~f~p~~~---~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~  220 (611)
T 1nr0_A          145 GQARAMNSVDFKPSRP---FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGV  220 (611)
T ss_dssp             CCSSCEEEEEECSSSS---CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred             CCCCCceEEEECCCCC---eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECC
Confidence            5788999999999974   4699999999999999999999999999999999999999 89999999999999999999


Q ss_pred             Ccceeeeecc----ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc---------cccC-------
Q psy10348         88 TDICIAIFGG----VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES---------YTFN-------  147 (291)
Q Consensus        88 ~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---------~~~~-------  147 (291)
                      +++.+..+..    ..+|...|.+++|+|++++|++++.|++|++||+++++....+...         ..+.       
T Consensus       221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~  300 (611)
T 1nr0_A          221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI  300 (611)
T ss_dssp             TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred             CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence            9988777621    1179999999999999999999999999999999988766554321         0010       


Q ss_pred             -CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc--CCCceee------
Q psy10348        148 -PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT--NETNVTI------  216 (291)
Q Consensus       148 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~------  216 (291)
                       .++....+....  ........+|...|.+++|+  +++|++++.|++|++||+.++.......  +......      
T Consensus       301 s~d~~i~~~~~~~--~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~  378 (611)
T 1nr0_A          301 SANGFINFVNPEL--GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK  378 (611)
T ss_dssp             ETTCCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred             eCCCcEEEEeCCC--CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence             001111111110  01223456799999999998  7899999999999999998765432110  0000000      


Q ss_pred             ---------------------------------------------------------------eeeecCCcccEEEEEEE
Q psy10348        217 ---------------------------------------------------------------INRLNFKDCEIWFIRFS  233 (291)
Q Consensus       217 ---------------------------------------------------------------~~~~~~~~~~i~~~~~~  233 (291)
                                                                                     +..+. +...+.  +++
T Consensus       379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~-~~~~v~--~va  455 (611)
T 1nr0_A          379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP-ISYNSS--CVA  455 (611)
T ss_dssp             SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE-CSSCEE--EEE
T ss_pred             CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee-cCCCce--EEE
Confidence                                                                           00000 112233  456


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++|||++||+|+.|++|++||+.++..    ..... .+|...|++++|+|||++|++
T Consensus       456 ~spdg~~lasgs~D~~v~lwd~~~~~~----~~~~~-~~h~~~v~~v~fspdg~~las  508 (611)
T 1nr0_A          456 LSNDKQFVAVGGQDSKVHVYKLSGASV----SEVKT-IVHPAEITSVAFSNNGAFLVA  508 (611)
T ss_dssp             ECTTSCEEEEEETTSEEEEEEEETTEE----EEEEE-EECSSCEEEEEECTTSSEEEE
T ss_pred             EeCCCCEEEEeCCCCeEEEEEccCCce----eeeec-cCCCCceEEEEECCCCCEEEE
Confidence            678899999999999999999987531    11112 468889999999999999974

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.8e-39  Score=260.43  Aligned_cols=242  Identities=19%  Similarity=0.273  Sum_probs=192.3

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      .|++++|+|++    ++|++|+.||.|++||+++++.+..+.+|...|.+++|+| ++.+|++++.|++|++||+++++.
T Consensus       125 ~v~~v~~s~dg----~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~  199 (393)
T 1erj_A          125 YIRSVCFSPDG----KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQC  199 (393)
T ss_dssp             BEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEE
T ss_pred             eEEEEEECCCC----CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCee
Confidence            59999999998    5999999999999999999999999999999999999999 889999999999999999999988


Q ss_pred             eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      ...+    .+...+.+++|+| ++++|++|+.|+.|++||+++++.+..+...                     .....+
T Consensus       200 ~~~~----~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~---------------------~~~~~~  254 (393)
T 1erj_A          200 SLTL----SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE---------------------NESGTG  254 (393)
T ss_dssp             EEEE----ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------------------------CC
T ss_pred             EEEE----EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc---------------------ccCCCC
Confidence            7776    4667899999999 8999999999999999999988755443210                     011135


Q ss_pred             cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      |...|.+++|+  +++|++++.|+.|++||++...................+.+|...+..+++.  |++.+|++|+.||
T Consensus       255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~sgs~D~  332 (393)
T 1erj_A          255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT--QNDEYILSGSKDR  332 (393)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC--GGGCEEEEEETTS
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC--CCCCEEEEEeCCC
Confidence            88999999998  7799999999999999998754322111112223456677888877766555  6699999999999


Q ss_pred             cEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc------CCceeeC
Q psy10348        249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK------NGNVLLC  291 (291)
Q Consensus       249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~g~~l~s  291 (291)
                      .|++||+.++++    ...  ..+|...|.+++|++      ++++|++
T Consensus       333 ~v~iwd~~~~~~----~~~--l~~h~~~v~~v~~~~~~~~~p~~~~l~s  375 (393)
T 1erj_A          333 GVLFWDKKSGNP----LLM--LQGHRNSVISVAVANGSSLGPEYNVFAT  375 (393)
T ss_dssp             EEEEEETTTCCE----EEE--EECCSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred             eEEEEECCCCeE----EEE--ECCCCCCEEEEEecCCcCcCCCCCEEEE
Confidence            999999998852    223  347889999999986      6777764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.8e-39  Score=255.26  Aligned_cols=251  Identities=17%  Similarity=0.188  Sum_probs=194.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|.+++|+|++    ++|++|+.|+.|++|+..++  +.+..+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus        59 ~h~~~v~~~~~sp~g----~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd  133 (345)
T 3fm0_A           59 GHQRTVRKVAWSPCG----NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWE  133 (345)
T ss_dssp             SCSSCEEEEEECTTS----SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred             ccCCcEEEEEECCCC----CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEE
Confidence            478999999999998    49999999999999998876  45778899999999999999 899999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.++.....+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++...                          .
T Consensus       134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~--------------------------~  187 (345)
T 3fm0_A          134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC--------------------------C  187 (345)
T ss_dssp             ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE--------------------------E
T ss_pred             CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE--------------------------E
Confidence            98765433333337899999999999999999999999999999988764221                          1


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc---ccCCCceeeeeeecC-CcccEEEEEEEecCCCc
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL---RTNETNVTIINRLNF-KDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~  239 (291)
                      ..+.+|...|.+++|+  +++|++++.|++|++||.........   .........+..+.+ |...|+.++++  |++.
T Consensus       188 ~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~~  265 (345)
T 3fm0_A          188 ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC--QLTG  265 (345)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC--TTTC
T ss_pred             EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe--cCCC
Confidence            1234599999999998  77999999999999999643322100   001111233444444 66677766554  6699


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeE---EEeccccccceeeeEEccCCc-eeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQ---ILSHPRCMSAVRQTTLSKNGN-VLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~g~-~l~s  291 (291)
                      .|++++.|+.|++|+............   .....+|...|++++|+|++. +||+
T Consensus       266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS  321 (345)
T 3fm0_A          266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS  321 (345)
T ss_dssp             CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred             EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence            999999999999999987643222111   122357899999999999985 6764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2e-39  Score=256.91  Aligned_cols=239  Identities=20%  Similarity=0.305  Sum_probs=190.7

Q ss_pred             eecc-eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--E-EeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          8 LIEE-NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--H-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~-~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .|.+ .|++++|+|++    ++||+|+.|++|+|||+++++...  . ..+|...|.+++|+| ++++|++|+.|+.|++
T Consensus        13 ~h~~~~v~~l~~sp~g----~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~i   87 (345)
T 3fm0_A           13 AHPDSRCWFLAWNPAG----TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCI   87 (345)
T ss_dssp             CSTTSCEEEEEECTTS----SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred             CCCCCcEEEEEECCCC----CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEE
Confidence            3555 89999999998    499999999999999998776432  2 257999999999999 9999999999999999


Q ss_pred             EECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         84 WNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        84 wd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ||+..+.  .+..+   .+|...|.+++|+|++++|++++.|+.|++||++++.....                      
T Consensus        88 w~~~~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~----------------------  142 (345)
T 3fm0_A           88 WKKNQDDFECVTTL---EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC----------------------  142 (345)
T ss_dssp             EEECCC-EEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE----------------------
T ss_pred             EEccCCCeEEEEEc---cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE----------------------
Confidence            9988664  44555   79999999999999999999999999999999987542111                      


Q ss_pred             CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                         .....+|...|.+++|+  +++|++++.|+.|++||.+....          .....+.+|...|..++|+  |+++
T Consensus       143 ---~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~----------~~~~~~~~h~~~v~~l~~s--p~g~  207 (345)
T 3fm0_A          143 ---VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW----------VCCATLEGHESTVWSLAFD--PSGQ  207 (345)
T ss_dssp             ---EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE----------EEEEEECCCSSCEEEEEEC--TTSS
T ss_pred             ---EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE----------EEEEEecCCCCceEEEEEC--CCCC
Confidence               12234588999999998  77999999999999999876532          3356788888888876665  6699


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcce---------eEEEecc-ccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIK---------FQILSHP-RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~---------~~~~~~~-~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++|+.||+|++|+..........         ....... .|...|.+++|+|++..|++
T Consensus       208 ~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s  269 (345)
T 3fm0_A          208 RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT  269 (345)
T ss_dssp             EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE
T ss_pred             EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE
Confidence            9999999999999997543221110         0111112 37789999999999998874

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.7e-39  Score=255.23  Aligned_cols=232  Identities=19%  Similarity=0.328  Sum_probs=187.2

Q ss_pred             eecceeEEEEeeecc--CCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348          8 LIEENFYTCAWSMDL--ESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKD   78 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~--~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d   78 (291)
                      .|.+.|++++|.+..  .+++++|++|+.|++|++||+.++       .....+.+|...|.+++|+| ++.++++|+.|
T Consensus        19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D   97 (343)
T 2xzm_R           19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWD   97 (343)
T ss_dssp             CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETT
T ss_pred             cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCC
Confidence            588999999993221  113479999999999999998743       45677889999999999999 88999999999


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      ++|++||+++++.+..+   .+|...|.+++|+|++++|++++.|+.|++||+........                   
T Consensus        98 ~~v~lwd~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~-------------------  155 (343)
T 2xzm_R           98 KTLRLWDLRTGTTYKRF---VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSS-------------------  155 (343)
T ss_dssp             SEEEEEETTSSCEEEEE---ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEEC-------------------
T ss_pred             CcEEEEECCCCcEEEEE---cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeee-------------------
Confidence            99999999999988888   79999999999999999999999999999999874321110                   


Q ss_pred             cccCcccccccccCcceeEEEEc--C----------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--G----------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                             .....|...|.+++|+  +          .++++++.|+.|++||...             .....+..|...
T Consensus       156 -------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------------~~~~~~~~h~~~  215 (343)
T 2xzm_R          156 -------AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-------------QIRYTFKAHESN  215 (343)
T ss_dssp             -------CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-------------EEEEEEECCSSC
T ss_pred             -------ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-------------ceeEEEcCcccc
Confidence                   0112488889999997  2          5899999999999999432             335677788888


Q ss_pred             EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +..+++  +|++++|++|+.||.|++||+......   ...+.   +...|.+++|+|++++|+
T Consensus       216 v~~~~~--s~~g~~l~sgs~dg~v~iwd~~~~~~~---~~~~~---~~~~v~~v~~sp~~~~la  271 (343)
T 2xzm_R          216 VNHLSI--SPNGKYIATGGKDKKLLIWDILNLTYP---QREFD---AGSTINQIAFNPKLQWVA  271 (343)
T ss_dssp             EEEEEE--CTTSSEEEEEETTCEEEEEESSCCSSC---SEEEE---CSSCEEEEEECSSSCEEE
T ss_pred             ceEEEE--CCCCCEEEEEcCCCeEEEEECCCCccc---ceeec---CCCcEEEEEECCCCCEEE
Confidence            877655  467999999999999999999654321   12222   335799999999999876

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=9.8e-40  Score=257.82  Aligned_cols=229  Identities=17%  Similarity=0.195  Sum_probs=176.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-----------cceeEEEeeeccceeEEEEecCCCcEEEEe
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-----------HACVRHFYGHGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      ..++..|.+++|+||+    .+|++++ |+++++||...           .........|...|.+++|+| + ..|++|
T Consensus        27 ~~~~~~v~~~~fs~dG----~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~~~   99 (344)
T 4gqb_B           27 ACMERQLEAARYRSDG----ALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGILVA   99 (344)
T ss_dssp             SSCCSEEEEEEECTTS----CEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEEEE
T ss_pred             ccccCCEEEEEECCCC----CEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEEEE
Confidence            3467889999999999    4888776 67788887321           112223345778899999999 6 478899


Q ss_pred             ecCCeEEEEECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348         76 SKDHTLRLWNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        76 ~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~  154 (291)
                      +.||+|+|||+.+++.+..+. .+.+|...|++++|+|++++|++|+.|++|++||+++++.+..+              
T Consensus       100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~--------------  165 (344)
T 4gqb_B          100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY--------------  165 (344)
T ss_dssp             ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE--------------
T ss_pred             ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE--------------
Confidence            999999999999887655432 12589999999999999999999999999999999998866544              


Q ss_pred             ccCccccCcccccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--CcccEEE
Q psy10348        155 FDTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--KDCEIWF  229 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~  229 (291)
                                    .+|...|.+++|+  + .+|++++.|++|++||+++.+.            ...+..  +...+..
T Consensus       166 --------------~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~------------~~~~~~~~~~~~~~~  219 (344)
T 4gqb_B          166 --------------RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP------------ASQIGCSAPGYLPTS  219 (344)
T ss_dssp             --------------CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC------------EEECC----CCCEEE
T ss_pred             --------------cCcCCceEEEEecCCCCCceeeeccccccccccccccce------------eeeeecceeecccee
Confidence                          3599999999998  3 4789999999999999998765            344432  3333444


Q ss_pred             EEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348        230 IRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL  290 (291)
Q Consensus       230 ~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~  290 (291)
                        ++++| ++++|++|+.||.|++||+++++++    ..+  .+|...|++++|+|+|. +|+
T Consensus       220 --~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~--~~h~~~v~~v~fsp~g~~~la  274 (344)
T 4gqb_B          220 --LAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSS--AVHSQCVTGLVFSPHSVPFLA  274 (344)
T ss_dssp             --EEECSSCTTEEEEEETTSEEEEEESCC--CC----EEE--ECCSSCEEEEEECSSSSCCEE
T ss_pred             --eeecCCCCcceEEeccCCcEEEEECCCCcEE----EEE--cCCCCCEEEEEEccCCCeEEE
Confidence              44555 4678999999999999999988643    333  37889999999999984 565

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=9.6e-39  Score=257.32  Aligned_cols=240  Identities=17%  Similarity=0.235  Sum_probs=187.9

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc------------------ceeEEEEecCC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH------------------AINELKFHPQD   68 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~   68 (291)
                      +.|...|++++|+|++    ++||+|+ ++.+++|++.+++.+..+..|..                  .|.+++|+| +
T Consensus        61 ~~h~~~V~~v~fspdg----~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-d  134 (393)
T 1erj_A           61 LDHTSVVCCVKFSNDG----EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-D  134 (393)
T ss_dssp             EECSSCCCEEEECTTS----SEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-T
T ss_pred             cCCCCEEEEEEECCCC----CEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-C
Confidence            4589999999999998    4999876 68999999999998887765532                  489999999 9


Q ss_pred             CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      +++|++|+.|+.|++||+.+++.+..+   .+|...|.+++|+|++++|++++.|++|++||+++++....+.       
T Consensus       135 g~~l~s~~~d~~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------  204 (393)
T 1erj_A          135 GKFLATGAEDRLIRIWDIENRKIVMIL---QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-------  204 (393)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------
T ss_pred             CCEEEEEcCCCeEEEEECCCCcEEEEE---ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-------
Confidence            999999999999999999999888887   7999999999999999999999999999999999887554432       


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                                            +...+.+++|+   +++|++++.|+.|++||++++.......     .......+|..
T Consensus       205 ----------------------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~h~~  257 (393)
T 1erj_A          205 ----------------------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD-----SENESGTGHKD  257 (393)
T ss_dssp             ----------------------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-----------CCCSS
T ss_pred             ----------------------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeec-----ccccCCCCCCC
Confidence                                  55668899997   6799999999999999998875421000     00011246777


Q ss_pred             cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcc------eeEEEeccccccceeeeEEccCCceeeC
Q psy10348        226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSI------KFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~------~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|..++|+  |++++|++|+.||.|++||+.+......      ........+|...|.+++|+|++++|++
T Consensus       258 ~v~~v~~~--~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  327 (393)
T 1erj_A          258 SVYSVVFT--RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS  327 (393)
T ss_dssp             CEEEEEEC--TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEE
T ss_pred             CEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEE
Confidence            77766554  6699999999999999999987542111      0112233478889999999999999874

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=4.1e-38  Score=246.69  Aligned_cols=227  Identities=20%  Similarity=0.302  Sum_probs=189.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|.+++|+|++    .+|++|+.|++|++||+++++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||++
T Consensus        63 ~h~~~v~~~~~s~dg----~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~  137 (319)
T 3frx_A           63 GHSHIVQDCTLTADG----AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK  137 (319)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT
T ss_pred             CCcccEEEEEECCCC----CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence            578999999999998    5999999999999999999999999999999999999999 89999999999999999997


Q ss_pred             CcceeeeeccccCCCCceEEEEEccC------CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLL------GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                       ++.+..+   .+|...|.++.|+|.      +..|++++.|+.|++||+++.+....+                     
T Consensus       138 -~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---------------------  192 (319)
T 3frx_A          138 -GQCLATL---LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF---------------------  192 (319)
T ss_dssp             -SCEEEEE---CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE---------------------
T ss_pred             -CCeEEEE---eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee---------------------
Confidence             5566666   689999999999985      448999999999999999887654333                     


Q ss_pred             CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                             .+|...|.+++|+  +++|++++.|+.|++||+.+.+.            +..+..+ ..+..  ++++|++.
T Consensus       193 -------~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~-~~v~~--~~~sp~~~  250 (319)
T 3frx_A          193 -------IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA------------MYTLSAQ-DEVFS--LAFSPNRY  250 (319)
T ss_dssp             -------CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE------------EEEEECC-SCEEE--EEECSSSS
T ss_pred             -------cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE------------EEEecCC-CcEEE--EEEcCCCC
Confidence                   3589999999998  77999999999999999988743            5555544 34554  45567799


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEe------ccccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILS------HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++++.+ .+++|++.....    ...+.      ...+...+.+++|+|||++|++
T Consensus       251 ~la~~~~~-~i~v~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s  303 (319)
T 3frx_A          251 WLAAATAT-GIKVFSLDPQYL----VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA  303 (319)
T ss_dssp             EEEEEETT-EEEEEEETTEEE----EEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred             EEEEEcCC-CcEEEEeCcCee----eeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence            99998865 499999987532    12221      1235567999999999999974

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.4e-39  Score=261.07  Aligned_cols=239  Identities=14%  Similarity=0.218  Sum_probs=195.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    ++|++|+.||+|+|||+.+++....+..|...|.+++|+| ++++|++|+.|+.+++||+.
T Consensus        64 gH~~~V~~~~~sp~~----~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~~  138 (380)
T 3iz6_a           64 GHSGKVYSLDWTPEK----NWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNLS  138 (380)
T ss_dssp             CCSSCEEEEEECTTS----SCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEECC
T ss_pred             ccccEEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEECC
Confidence            588999999999998    4999999999999999999999999999999999999999 99999999999999999987


Q ss_pred             Ccce----eeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         88 TDIC----IAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        88 ~~~~----~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +...    ......+.+|...|.++.|.|++ ..|++|+.|++|++||+++++.+..+..                    
T Consensus       139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~--------------------  198 (380)
T 3iz6_a          139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS--------------------  198 (380)
T ss_dssp             CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC--------------------
T ss_pred             CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec--------------------
Confidence            5321    11112237999999999999974 5799999999999999998876543321                    


Q ss_pred             cccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                         ....+|...|.++.|+   +++|++|+.|++|++||++....           .+..+.+|...|..++|+  |+++
T Consensus       199 ---~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-----------~~~~~~~h~~~v~~v~~~--p~~~  262 (380)
T 3iz6_a          199 ---EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR-----------AVRTYHGHEGDINSVKFF--PDGQ  262 (380)
T ss_dssp             ---CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-----------CCEEECCCSSCCCEEEEC--TTSS
T ss_pred             ---ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-----------ceEEECCcCCCeEEEEEe--cCCC
Confidence               0113488899999996   67999999999999999975432           267788898888877665  6699


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-----ccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-----RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++|+.||+|++||+++++.+    ..+...     .+...|++++|+|+|++|++
T Consensus       263 ~l~s~s~D~~i~lwd~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~  315 (380)
T 3iz6_a          263 RFGTGSDDGTCRLFDMRTGHQL----QVYNREPDRNDNELPIVTSVAFSISGRLLFA  315 (380)
T ss_dssp             EEEEECSSSCEEEEETTTTEEE----EEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred             eEEEEcCCCeEEEEECCCCcEE----EEecccccccccccCceEEEEECCCCCEEEE
Confidence            9999999999999999987532    233211     12235899999999999874

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-38  Score=249.00  Aligned_cols=236  Identities=22%  Similarity=0.318  Sum_probs=181.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEE-ee-eccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHF-YG-HGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .|.++|++++|+|+      +||+|+.|++|++||+.++  +.+..+ .+ |...|.+++|+| ++.+|++|+.|++|++
T Consensus        12 ~h~~~v~~~~~s~~------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~i   84 (330)
T 2hes_X           12 LYKEKIWSFDFSQG------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSI   84 (330)
T ss_dssp             CCSSCEEEEEEETT------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred             cCCCceeeeccCCC------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEE
Confidence            58899999999875      8999999999999999875  445555 34 999999999999 8999999999999999


Q ss_pred             EECCCc-------ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         84 WNIKTD-------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        84 wd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      ||+...       +.+..+   .+|...|.+++|+|++++|++|+.|++|++||++......                  
T Consensus        85 w~~~~~~~~~~~~~~~~~~---~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~------------------  143 (330)
T 2hes_X           85 WAKEESADRTFEMDLLAII---EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY------------------  143 (330)
T ss_dssp             EEC-------CCCEEEEEE---C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC------------------
T ss_pred             EEcccCcCccccceeEEEE---cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe------------------
Confidence            998532       344455   7999999999999999999999999999999995432100                  


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                            .....+.+|...|.+++|+  +++|++++.|++|++||......          ..+..+.+|...|+.+++++
T Consensus       144 ------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~----------~~~~~~~~h~~~v~~~~~~~  207 (330)
T 2hes_X          144 ------ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW----------ECVAVLNGHEGTVWSSDFDK  207 (330)
T ss_dssp             ------EEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE----------EEEEEECCCSSCEEEEEECC
T ss_pred             ------EEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe----------eEEEEccCCCCcEEEEEecC
Confidence                  0112234589999999998  77999999999999999865422          34778889999998887775


Q ss_pred             cCCCcEEEEEcCCCcEEEEEcCCCCCCcce--eEEEecc-ccccceeeeEEccCCc
Q psy10348        235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIK--FQILSHP-RCMSAVRQTTLSKNGN  287 (291)
Q Consensus       235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~~-~~~~~v~~~~~s~~g~  287 (291)
                      +.++.+|++|+.|++|++||+..+......  ....... .|...|.+++|++++.
T Consensus       208 ~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~  263 (330)
T 2hes_X          208 TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL  263 (330)
T ss_dssp             SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSC
T ss_pred             CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCE
Confidence            544789999999999999999765321111  1112222 3888999999998763

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.3e-40  Score=262.99  Aligned_cols=250  Identities=8%  Similarity=0.043  Sum_probs=190.1

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ++...+.++|++++|+|++    ++||+|+.||.|++||+.++  +.+..+.+|...|.+++|+| ++++|++++.|+.|
T Consensus         5 ~~~~~~~~~v~~~~~s~~g----~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v   79 (377)
T 3dwl_C            5 QVLHILPKPSYEHAFNSQR----TEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNA   79 (377)
T ss_dssp             EEEEECSSCCSCCEECSSS----SEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSE
T ss_pred             eeEecCCCcEEEEEECCCC----CEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeE
Confidence            3344567899999999998    49999999999999999988  77888899999999999999 88999999999999


Q ss_pred             EEEECCCcc---eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         82 RLWNIKTDI---CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        82 ~vwd~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      ++||+.+++   ....+   ..|...|.+++|+|++++|++++.|+.|++||+++++....                   
T Consensus        80 ~vwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-------------------  137 (377)
T 3dwl_C           80 YVYEKRPDGTWKQTLVL---LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV-------------------  137 (377)
T ss_dssp             EEC------CCCCEEEC---CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC-------------------
T ss_pred             EEEEcCCCCceeeeeEe---cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee-------------------
Confidence            999999877   44444   68999999999999999999999999999999988763111                   


Q ss_pred             cccCcccccccc-cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc---CC---CceeeeeeecCCcccEEE
Q psy10348        159 KEHFPQFSTRDI-HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT---NE---TNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       159 ~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~i~~  229 (291)
                            ...... |...|.+++|+  +++|++++.|+.|++||++.........   ..   .....+..+ .|...+..
T Consensus       138 ------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  210 (377)
T 3dwl_C          138 ------SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHA  210 (377)
T ss_dssp             ------CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEE
T ss_pred             ------eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEE
Confidence                  111123 88999999998  6799999999999999986543211000   00   113445666 78888877


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++  |++++|++++.||.|++||+.+++.......  ...+|..+|.+++|+|+|++|++
T Consensus       211 ~~~s--p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~  268 (377)
T 3dwl_C          211 VGFS--PSGNALAYAGHDSSVTIAYPSAPEQPPRALI--TVKLSQLPLRSLLWANESAIVAA  268 (377)
T ss_dssp             EEEC--TTSSCEEEEETTTEEC-CEECSTTSCEEECC--CEECSSSCEEEEEEEETTEEEEE
T ss_pred             EEEC--CCCCEEEEEeCCCcEEEEECCCCCCcceeeE--eecCCCCceEEEEEcCCCCEEEE
Confidence            6655  6699999999999999999999875211112  23367889999999999999874

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-38  Score=250.52  Aligned_cols=239  Identities=13%  Similarity=0.197  Sum_probs=178.7

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-------cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-------HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      |.+.|++++|+|++    .+|++|+.|++|+|||++.       .+.+..+.+|...|.+++|+| ++++|++|+.|++|
T Consensus        57 h~~~v~~v~~sp~~----~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v  131 (330)
T 2hes_X           57 HKKAIRSVAWRPHT----SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSV  131 (330)
T ss_dssp             CCSCEEEEEECTTS----SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCE
T ss_pred             ccCCEEEEEECCCC----CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEE
Confidence            88899999999998    4999999999999999853       356778889999999999999 89999999999999


Q ss_pred             EEEECCCc----ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         82 RLWNIKTD----ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        82 ~vwd~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      ++||+...    +.+..+   .+|...|.+++|+|++.+|++++.|++|++||+.++...                    
T Consensus       132 ~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~--------------------  188 (330)
T 2hes_X          132 WIWETDESGEEYECISVL---QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE--------------------  188 (330)
T ss_dssp             EEEECCTTCCCCEEEEEE---CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE--------------------
T ss_pred             EEEeccCCCCCeEEEEEe---ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee--------------------
Confidence            99999432    344455   789999999999999999999999999999998765210                    


Q ss_pred             ccccCcccccccccCcceeEEEEcC----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEE
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWLG----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRF  232 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~  232 (291)
                            ....+.+|...|.+++|++    .+|++++.|++|++||++......    .........+.. |...|..+++
T Consensus       189 ------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~v~~  258 (330)
T 2hes_X          189 ------CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD----QQEWVCEAILPDVHKRQVYNVAW  258 (330)
T ss_dssp             ------EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS----CEEEEEEEECCSCCSSCEEEEEE
T ss_pred             ------EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc----cceeEEeeecccccccceEEEEE
Confidence                  1122346999999999983    379999999999999986542210    000122344444 7778887777


Q ss_pred             EecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccccc-ceeeeEEcc--CCceeeC
Q psy10348        233 SMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS-AVRQTTLSK--NGNVLLC  291 (291)
Q Consensus       233 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~g~~l~s  291 (291)
                      +  + +.+|++++.||.|++||..+++.   ........+|.. .|++++|+|  ++++||+
T Consensus       259 s--~-~~~l~s~~~dg~v~iw~~~~~~~---~~~~~~~~~h~~~~v~~v~~~~~~~~~~las  314 (330)
T 2hes_X          259 G--F-NGLIASVGADGVLAVYEEVDGEW---KVFAKRALCHGVYEINVVKWLELNGKTILAT  314 (330)
T ss_dssp             C--T-TSCEEEEETTSCEEEEEEETTEE---EEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred             c--C-CCEEEEEeCCCEEEEEEcCCCce---EEEeccccccccceEEEEEEecCCCceEEEE
Confidence            6  4 45899999999999999876531   111112236766 899999999  6888874

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.6e-38  Score=252.60  Aligned_cols=234  Identities=18%  Similarity=0.219  Sum_probs=175.7

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecC------CCeEEEEccCCcce----eEEEeeeccceeEEEEecCCCcEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGS------RAVIRIFSPAFHAC----VRHFYGHGHAINELKFHPQDFNLLLS   74 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~------dg~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s   74 (291)
                      ....|++.|++++||||+    ++||+|+.      |+.|++|+..++..    .....+|...|.+++|+| ++. +++
T Consensus        37 ~p~~H~~~V~~v~fSpDG----~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-d~~-~l~  110 (357)
T 4g56_B           37 APACMEVQIGAVRYRRDG----ALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVS-EKG-ILV  110 (357)
T ss_dssp             ---CCCSEEEEEEECSSS----CEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEET-TTE-EEE
T ss_pred             CcccccCCEEEEEECCCC----CEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcC-CCC-EEE
Confidence            344689999999999999    59999987      78899999877643    344567889999999999 765 556


Q ss_pred             eecCCeEEEEECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccc
Q psy10348         75 VSKDHTLRLWNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR  153 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  153 (291)
                      ++.||+|+|||+.+++...... ...+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+             
T Consensus       111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~-------------  177 (357)
T 4g56_B          111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY-------------  177 (357)
T ss_dssp             EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-------------
T ss_pred             EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------
Confidence            7889999999999876543321 12479999999999999999999999999999999988765544             


Q ss_pred             cccCccccCcccccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348        154 PFDTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                                     .+|...|.+++|+  + .++++++.|++|++||+++.+..          .......+...+..+
T Consensus       178 ---------------~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~----------~~~~~~~~~~~v~~v  232 (357)
T 4g56_B          178 ---------------NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA----------TRIDFCASDTIPTSV  232 (357)
T ss_dssp             ---------------CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB----------CBCCCTTCCSCEEEE
T ss_pred             ---------------cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee----------eeeeeccccccccch
Confidence                           3489999999997  3 48999999999999999887652          112223344455555


Q ss_pred             EEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348        231 RFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL  290 (291)
Q Consensus       231 ~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~  290 (291)
                      +  ++|+ +.+|++|+.|+.|++||+++++.+    ..+  .+|...|++++|+|++. +||
T Consensus       233 ~--~sp~~~~~la~g~~d~~i~~wd~~~~~~~----~~~--~~~~~~v~~l~~sp~~~~~la  286 (357)
T 4g56_B          233 T--WHPEKDDTFACGDETGNVSLVNIKNPDSA----QTS--AVHSQNITGLAYSYHSSPFLA  286 (357)
T ss_dssp             E--ECTTSTTEEEEEESSSCEEEEESSCGGGC----EEE--CCCSSCEEEEEECSSSSCCEE
T ss_pred             h--hhhcccceEEEeecccceeEEECCCCcEe----EEE--eccceeEEEEEEcCCCCCEEE
Confidence            4  4554 578999999999999999987532    333  36788999999999984 565

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3.3e-38  Score=267.73  Aligned_cols=233  Identities=12%  Similarity=0.139  Sum_probs=190.4

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecC----Ce
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKD----HT   80 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~   80 (291)
                      ..|.+.|++++|+|++    ++||+|+.||+|+|||+.+++  ....+.+|.++|.+++|+| ++++|++++.+    +.
T Consensus        56 ~~h~~~v~~~~~spdg----~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~  130 (611)
T 1nr0_A           56 TEHSHQTTVAKTSPSG----YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGH  130 (611)
T ss_dssp             CCCSSCEEEEEECTTS----SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEE
T ss_pred             cCCCCceEEEEECCCC----cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeE
Confidence            3688999999999999    599999999999999987543  4567789999999999999 88999988865    47


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      |++||  .++....+   .+|...|.+++|+|++. .|++|+.|++|++||..+++....+                   
T Consensus       131 v~~wd--~~~~~~~l---~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-------------------  186 (611)
T 1nr0_A          131 VFLFD--TGTSNGNL---TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-------------------  186 (611)
T ss_dssp             EEETT--TCCBCBCC---CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-------------------
T ss_pred             EEEee--CCCCccee---cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-------------------
Confidence            88887  45555565   79999999999999987 6999999999999998877654433                   


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec-------CCcccEEEE
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-------FKDCEIWFI  230 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~  230 (291)
                               .+|...|.+++|+  +++|++++.|++|++||+.+++.            +..+.       +|...|..+
T Consensus       187 ---------~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~------------~~~~~~~~~~~~~h~~~V~~v  245 (611)
T 1nr0_A          187 ---------GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK------------TGVFEDDSLKNVAHSGSVFGL  245 (611)
T ss_dssp             ---------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------------EEECBCTTSSSCSSSSCEEEE
T ss_pred             ---------ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE------------eeeeccccccccccCCCEEEE
Confidence                     3599999999998  77999999999999999987754            33442       677888776


Q ss_pred             EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee-------------------------------------EEEecccc
Q psy10348        231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF-------------------------------------QILSHPRC  273 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------------------------------~~~~~~~~  273 (291)
                      +|+  |++++|++++.|++|++||+.+++......                                     ......+|
T Consensus       246 ~~s--pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh  323 (611)
T 1nr0_A          246 TWS--PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH  323 (611)
T ss_dssp             EEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred             EEC--CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC
Confidence            655  669999999999999999998865322110                                     01122478


Q ss_pred             ccceeeeEEccCCceeeC
Q psy10348        274 MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~s  291 (291)
                      ...|++++|+|||++|++
T Consensus       324 ~~~v~~l~~spdg~~l~s  341 (611)
T 1nr0_A          324 NKAITALSSSADGKTLFS  341 (611)
T ss_dssp             SSCEEEEEECTTSSEEEE
T ss_pred             CCCEEEEEEeCCCCEEEE
Confidence            899999999999999874

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.4e-37  Score=246.13  Aligned_cols=232  Identities=18%  Similarity=0.265  Sum_probs=183.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|++++|+|++    .++++|+.|++|++||+++++.+..+.+|...|.+++|+| ++.+|++++.|++|++||+.
T Consensus        74 ~h~~~V~~~~~~~~~----~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~  148 (343)
T 2xzm_R           74 GHNHFVSDLALSQEN----CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNIL  148 (343)
T ss_dssp             CCSSCEEEEEECSST----TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESS
T ss_pred             cCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEecc
Confidence            578899999999998    5999999999999999999999999999999999999999 89999999999999999998


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCC----------CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLG----------TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                       +...........|...|.+++|+|++          .+|++++.|+.|++||.. .+...                   
T Consensus       149 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~-------------------  207 (343)
T 2xzm_R          149 -GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRY-------------------  207 (343)
T ss_dssp             -SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEE-------------------
T ss_pred             -CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeE-------------------
Confidence             44444433334799999999999987          789999999999999943 22221                   


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                               .+.+|...|.+++|+  +++|++++.|+.|++||+......           ...+. +...+..+  +++
T Consensus       208 ---------~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~-----------~~~~~-~~~~v~~v--~~s  264 (343)
T 2xzm_R          208 ---------TFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP-----------QREFD-AGSTINQI--AFN  264 (343)
T ss_dssp             ---------EEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC-----------SEEEE-CSSCEEEE--EEC
T ss_pred             ---------EEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc-----------ceeec-CCCcEEEE--EEC
Confidence                     123588999999998  779999999999999999543321           22222 23345554  456


Q ss_pred             CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe---------ccccccceeeeEEccCCceeeC
Q psy10348        236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS---------HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |++.+++++ .|+.|++||+.+.+....  ..+.         ..+|...|++++|+|+|++|++
T Consensus       265 p~~~~la~~-~d~~v~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s  326 (343)
T 2xzm_R          265 PKLQWVAVG-TDQGVKIFNLMTQSKAPV--CTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA  326 (343)
T ss_dssp             SSSCEEEEE-ESSCEEEEESSSCCSCSE--EECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred             CCCCEEEEE-CCCCEEEEEeCCCCCCce--EEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence            778888765 577899999988764321  1111         1267788999999999999874

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.3e-37  Score=267.96  Aligned_cols=232  Identities=23%  Similarity=0.326  Sum_probs=194.7

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ..|.+.|++++|+|++.   .+|++|+.||+|++|++.+.     .....+.+|...|.+++|+| ++++|++|+.||+|
T Consensus       379 ~~H~~~V~~v~~~~~~~---~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v  454 (694)
T 3dm0_A          379 RAHTDMVTAIATPIDNA---DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGEL  454 (694)
T ss_dssp             ECCSSCEEEEECCTTCC---SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred             ccCCceeEEEEecCCCC---CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcE
Confidence            36899999999998764   69999999999999998753     34567889999999999999 99999999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ++||+.+++....+   .+|...|.+++|+|++++|++++.|++|++||+........                      
T Consensus       455 ~vwd~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~----------------------  509 (694)
T 3dm0_A          455 RLWDLAAGVSTRRF---VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI----------------------  509 (694)
T ss_dssp             EEEETTTTEEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE----------------------
T ss_pred             EEEECCCCcceeEE---eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceee----------------------
Confidence            99999999988888   79999999999999999999999999999999764432110                      


Q ss_pred             CcccccccccCcceeEEEEcC----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWLG----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                         .....+|...|.+++|+.    ..+++++.|++|++||++..+.            ...+.+|...|..++++  |+
T Consensus       510 ---~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~------------~~~~~~h~~~v~~v~~s--pd  572 (694)
T 3dm0_A          510 ---SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL------------RSTLAGHTGYVSTVAVS--PD  572 (694)
T ss_dssp             ---CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEEEEEC--TT
T ss_pred             ---ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE------------EEEEcCCCCCEEEEEEe--CC
Confidence               011135888999999982    4799999999999999987743            67788898888876655  66


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +++|++|+.||.|++||+.+++.      ... ..+...|.+++|+|++.+|++
T Consensus       573 g~~l~sg~~Dg~i~iwd~~~~~~------~~~-~~~~~~v~~~~~sp~~~~l~~  619 (694)
T 3dm0_A          573 GSLCASGGKDGVVLLWDLAEGKK------LYS-LEANSVIHALCFSPNRYWLCA  619 (694)
T ss_dssp             SSEEEEEETTSBCEEEETTTTEE------EEC-CBCSSCEEEEEECSSSSEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCce------EEE-ecCCCcEEEEEEcCCCcEEEE
Confidence            99999999999999999998742      111 234568999999999998863

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=5.1e-37  Score=242.98  Aligned_cols=255  Identities=16%  Similarity=0.195  Sum_probs=201.6

Q ss_pred             ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecC-CCcEEEEeec
Q psy10348          3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQ-DFNLLLSVSK   77 (291)
Q Consensus         3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~   77 (291)
                      +.+...|.+.|++++|+|++    ++|++|+.||.|++||+.++    +.+..+.+|...|.+++|+|. ++.+|++|+.
T Consensus         4 ~~~~~gH~~~v~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~   79 (351)
T 3f3f_A            4 QPFDSGHDDLVHDVVYDFYG----RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY   79 (351)
T ss_dssp             CCEECCCSSCEEEEEECSSS----SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred             cccCcccccceeEEEEcCCC----CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence            34556799999999999998    59999999999999999876    466777899999999999984 4899999999


Q ss_pred             CCeEEEEECCCc---------ceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348         78 DHTLRLWNIKTD---------ICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        78 dg~i~vwd~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      ||.|++||++++         +.+..+   ..|...|.+++|+|+  +.+|++++.||.|++||+++++.+..+......
T Consensus        80 dg~v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~  156 (351)
T 3f3f_A           80 DKTVKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM  156 (351)
T ss_dssp             TSCEEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE
T ss_pred             CCeEEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc
Confidence            999999999876         345555   789999999999999  999999999999999999998866554321000


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                      ..               .......|...+.+++|+     ++++++++.|+.+.+|+......          ..+..+.
T Consensus       157 ~~---------------~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~  211 (351)
T 3f3f_A          157 KV---------------LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL----------HVAAKLP  211 (351)
T ss_dssp             ES---------------CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE----------EEEEECC
T ss_pred             cc---------------cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce----------eeeeecC
Confidence            00               000112477889999996     56999999999998888766543          3467778


Q ss_pred             CCcccEEEEEEEecCCC----cEEEEEcCCCcEEEEEcCCCCCCc-----------------------------------
Q psy10348        222 FKDCEIWFIRFSMDYWQ----KILAVGNQSGRTYVWDLDVQDPSS-----------------------------------  262 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~-----------------------------------  262 (291)
                      .|...|..++++  |++    ++|++|+.||.|++||+..+....                                   
T Consensus       212 ~h~~~i~~~~~~--p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (351)
T 3f3f_A          212 GHKSLIRSISWA--PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE  289 (351)
T ss_dssp             CCCSCEEEEEEC--CCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred             CCCcceeEEEEC--CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence            888888877665  557    899999999999999998753111                                   


Q ss_pred             -----ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        263 -----IKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       263 -----~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                           .........+|...|++++|+|+|++|++
T Consensus       290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s  323 (351)
T 3f3f_A          290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS  323 (351)
T ss_dssp             -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred             ecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence                 01223334578899999999999999874

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-37  Score=247.86  Aligned_cols=242  Identities=17%  Similarity=0.204  Sum_probs=199.4

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEecCC--CcEEEEeecCCe
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHT   80 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~   80 (291)
                      ..-.|.+.|++++|+|++    ++||+|+.||.|++||+.  +++.+..+.+|...|.+++|++ +  +.+|++|+.||.
T Consensus         6 ~~~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~   80 (379)
T 3jrp_A            6 IANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGK   80 (379)
T ss_dssp             CEEECCCCEEEEEECSSS----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSC
T ss_pred             EecCCcccEEEEEEcCCC----CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC-CCCCCEEEEeccCCE
Confidence            344689999999999998    499999999999999998  6677888999999999999987 5  899999999999


Q ss_pred             EEEEECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         81 LRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        81 i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      |++||+.+++  .+..+   ..|...|.+++|+|+  +.+|++++.|+.|++||++........                
T Consensus        81 v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~----------------  141 (379)
T 3jrp_A           81 VLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI----------------  141 (379)
T ss_dssp             EEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE----------------
T ss_pred             EEEEEcCCCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE----------------
Confidence            9999999886  55555   689999999999999  999999999999999999876432211                


Q ss_pred             CccccCcccccccccCcceeEEEEcC---------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWLG---------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                                ....|...|.+++|++               +++++++.|+.|++||++.....        ......+.
T Consensus       142 ----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~  203 (379)
T 3jrp_A          142 ----------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------YVLESTLE  203 (379)
T ss_dssp             ----------EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE--------EEEEEEEC
T ss_pred             ----------EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc--------eeeEEEEe
Confidence                      1234888899999973               58999999999999999765431        13456777


Q ss_pred             CCcccEEEEEEEecCC---CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        222 FKDCEIWFIRFSMDYW---QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|...+..+++  +|+   +.+|++++.||.|++||+.++.... .........|...|.+++|+|+|++|++
T Consensus       204 ~h~~~v~~~~~--sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~  273 (379)
T 3jrp_A          204 GHSDWVRDVAW--SPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNVLAL  273 (379)
T ss_dssp             CCSSCEEEEEE--CCCCSSSEEEEEEETTSCEEEEEESSTTSCC-EEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred             cccCcEeEEEE--CCCCCCCCeEEEEeCCCEEEEEeCCCCCccc-eeeeeccccCCCcEEEEEEcCCCCEEEE
Confidence            88888776655  577   8999999999999999999875321 2233344467889999999999999874

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.5e-38  Score=252.32  Aligned_cols=234  Identities=22%  Similarity=0.303  Sum_probs=189.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .|...|.+++|+|++    ++|++|+.|+.+++|++.+.       .....+.+|.+.|.++.|+|.++..|++|+.|++
T Consensus       106 ~h~~~v~~~~~s~~g----~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~  181 (380)
T 3iz6_a          106 LHCPWVMECAFAPNG----QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT  181 (380)
T ss_dssp             CCCTTCCCCEECTTS----SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC
T ss_pred             cCCCCEEEEEECCCC----CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc
Confidence            467889999999998    59999999999999998653       2345678999999999999966778999999999


Q ss_pred             EEEEECCCcceeeeecc--ccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCcccccc
Q psy10348         81 LRLWNIKTDICIAIFGG--VEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      |++||+.+++.+..+..  ..+|...|.+++|++ ++.+|++|+.|+.|++||++.. +.+.                  
T Consensus       182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~------------------  243 (380)
T 3iz6_a          182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR------------------  243 (380)
T ss_dssp             EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE------------------
T ss_pred             EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE------------------
Confidence            99999999988876521  247899999999987 7889999999999999999743 3222                  


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC-------cccE
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK-------DCEI  227 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i  227 (291)
                                .+.+|...|.+++|+  +++|++++.|++|++||++++..            +..+..+       ...+
T Consensus       244 ----------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~------------~~~~~~~~~~~~~~~~~v  301 (380)
T 3iz6_a          244 ----------TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ------------LQVYNREPDRNDNELPIV  301 (380)
T ss_dssp             ----------EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE------------EEEECCCCSSSCCSSCSC
T ss_pred             ----------EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE------------EEEecccccccccccCce
Confidence                      234599999999998  77999999999999999998754            3333222       1224


Q ss_pred             EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe--ccccccceeeeEEccCCceeeC
Q psy10348        228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS--HPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..  ++++|+|++|++|+.||.|++||+..++..    ..+.  ..+|.+.|++++|+|||++|++
T Consensus       302 ~~--~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~----~~~~~~~~~h~~~v~~l~~s~dg~~l~s  361 (380)
T 3iz6_a          302 TS--VAFSISGRLLFAGYSNGDCYVWDTLLAEMV----LNLGTLQNSHEGRISCLGLSSDGSALCT  361 (380)
T ss_dssp             SE--EEECSSSSEEEEECTTSCEEEEETTTCCEE----EEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred             EE--EEECCCCCEEEEEECCCCEEEEECCCCceE----EEEecccCCCCCceEEEEECCCCCEEEE
Confidence            44  455677999999999999999999887532    2221  2478899999999999999975

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=5.9e-37  Score=245.12  Aligned_cols=248  Identities=12%  Similarity=0.117  Sum_probs=198.5

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      ...|.++|++++|+|++    ++|++++.||.|++||+.+++  .+..+.+|...|.+++|+| ++++|++++.||.|++
T Consensus         4 ~~~~~~~i~~~~~s~~~----~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~v   78 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDR----TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYV   78 (372)
T ss_dssp             EESCSSCCCEEEECTTS----SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEE
T ss_pred             ecccCCCeEEEEECCCC----CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEE
Confidence            34589999999999998    499999999999999999887  8888999999999999999 8999999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ||+++++....+. +..|...|.+++|+|++++|++++.|+.|++||++.+.......                      
T Consensus        79 wd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~----------------------  135 (372)
T 1k8k_C           79 WTLKGRTWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK----------------------  135 (372)
T ss_dssp             EEEETTEEEEEEE-CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE----------------------
T ss_pred             EECCCCeeeeeEE-eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeee----------------------
Confidence            9998876544431 25789999999999999999999999999999998876311110                      


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc------ccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL------RTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                        .....|...|.+++|+  +++|++++.|+.|++||++.......      .........+..+..|...+..++++  
T Consensus       136 --~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  211 (372)
T 1k8k_C          136 --HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS--  211 (372)
T ss_dssp             --EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC--
T ss_pred             --eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC--
Confidence              0112478899999998  77999999999999999753321100      00011124567777888888776655  


Q ss_pred             CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |++++|++++.||.|++||+.+++.    ...+  ..|..+|.+++|+|++++|++
T Consensus       212 ~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~--~~~~~~v~~~~~~~~~~~l~~  261 (372)
T 1k8k_C          212 ANGSRVAWVSHDSTVCLADADKKMA----VATL--ASETLPLLAVTFITESSLVAA  261 (372)
T ss_dssp             SSSSEEEEEETTTEEEEEEGGGTTE----EEEE--ECSSCCEEEEEEEETTEEEEE
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCce----eEEE--ccCCCCeEEEEEecCCCEEEE
Confidence            6699999999999999999998853    2333  367789999999999998874

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=6.7e-38  Score=255.73  Aligned_cols=210  Identities=17%  Similarity=0.146  Sum_probs=168.4

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ..|+..|+|++|+|...   .+||+|+.||.|+|||+.+++...  .+.+|.+.|++|+|+|.++.+|++|+.||+|++|
T Consensus       116 ~~~~~~V~~l~~~P~~~---~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw  192 (435)
T 4e54_B          116 APFDRRATSLAWHPTHP---STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ  192 (435)
T ss_dssp             EECSSCEEEEEECSSCT---TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred             CCCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence            35778899999999653   599999999999999998776544  3458999999999998778999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |++++.. ..+.....+...+.+++|+|++.+|++|+.||.|++||++... +..                         
T Consensus       193 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~-------------------------  245 (435)
T 4e54_B          193 DFKGNIL-RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWN-------------------------  245 (435)
T ss_dssp             ETTSCEE-EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCC-------------------------
T ss_pred             eccCCce-eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEE-------------------------
Confidence            9986543 3332223455678899999999999999999999999986533 211                         


Q ss_pred             cccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                         +.+|...|.+++|+  + .++++++.|+.|++||++..+..         ..+.....|...|..++|  +|++.+|
T Consensus       246 ---~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~---------~~~~~~~~h~~~v~~~~~--spdg~~l  311 (435)
T 4e54_B          246 ---LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK---------ASFLYSLPHRHPVNAACF--SPDGARL  311 (435)
T ss_dssp             ---SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS---------SCCSBCCBCSSCEEECCB--CTTSSEE
T ss_pred             ---EecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc---------ceEEEeeeccccccceeE--CCCCCee
Confidence               23589999999998  3 48889999999999999876542         112333457777776654  5779999


Q ss_pred             EEEcCCCcEEEEEcCCCCC
Q psy10348        242 AVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~  260 (291)
                      ++|+.||.|++||+.+++.
T Consensus       312 ~s~~~D~~i~iwd~~~~~~  330 (435)
T 4e54_B          312 LTTDQKSEIRVYSASQWDC  330 (435)
T ss_dssp             EEEESSSCEEEEESSSSSS
T ss_pred             EEEcCCCEEEEEECCCCcc
Confidence            9999999999999998764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.3e-37  Score=246.94  Aligned_cols=262  Identities=13%  Similarity=0.113  Sum_probs=191.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-ccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ..|.+.|++++|+|+.. ++.+|++|+.||.|++||+++ ++.+ ..+.+|...|.+++|+| ++++|++++.||.|++|
T Consensus        36 ~~h~~~v~~~~~~~~~~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iw  113 (368)
T 3mmy_A           36 SSPDDSIGCLSFSPPTL-PGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMW  113 (368)
T ss_dssp             SCCSSCEEEEEECCTTS-SSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred             cCCCCceEEEEEcCCCC-CceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEE
Confidence            36889999999999930 114999999999999999987 5554 77889999999999999 99999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEE--ccCCCEEEEEecCCcEEEEeccCchhhhhhcccc-----ccCC--------C
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADF--DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESY-----TFNP--------A  149 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~~~--------~  149 (291)
                      |+++++.+...    .|...|.+++|  +|++.+|++++.||.|++||+++++.+..+....     .+.+        +
T Consensus       114 d~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (368)
T 3mmy_A          114 DLSSNQAIQIA----QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE  189 (368)
T ss_dssp             ETTTTEEEEEE----ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG
T ss_pred             EcCCCCceeec----cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC
Confidence            99988877654    79999999999  8999999999999999999999988766554211     0000        0


Q ss_pred             CccccccCccccC--cccccccccCcceeEEEEcCC----EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        150 RSTRPFDTQKEHF--PQFSTRDIHRNYVDCVRWLGD----FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       150 ~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                      +....+.......  ........+...+.++.+...    .+++++.|+.|++||++.....         ..+..+..|
T Consensus       190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~---------~~~~~~~~~  260 (368)
T 3mmy_A          190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA---------KDNFTFKCH  260 (368)
T ss_dssp             GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH---------HHSEEEECS
T ss_pred             CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc---------ccceeeeee
Confidence            0111111110000  011111123333333333333    3999999999999999876431         113444444


Q ss_pred             cc------------cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        224 DC------------EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       224 ~~------------~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..            .+..+  +++|++++|++|+.||.|++||+.+++.      ......|..+|++++|+|+|++|++
T Consensus       261 ~~~~~~~~~~~~~~~v~~~--~~sp~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~  332 (368)
T 3mmy_A          261 RSNGTNTSAPQDIYAVNGI--AFHPVHGTLATVGSDGRFSFWDKDARTK------LKTSEQLDQPISACCFNHNGNIFAY  332 (368)
T ss_dssp             EEC----CCCEEECCEEEE--EECTTTCCEEEEETTSCEEEEETTTTEE------EEECCCCSSCEEEEEECTTSSCEEE
T ss_pred             ecccccccccccccceEEE--EEecCCCEEEEEccCCeEEEEECCCCcE------EEEecCCCCCceEEEECCCCCeEEE
Confidence            43            45555  4557799999999999999999998742      2334478899999999999999874

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=4.1e-36  Score=236.94  Aligned_cols=225  Identities=16%  Similarity=0.276  Sum_probs=194.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|...|.+++|+|++    ++|++++.||.|++||+++++  ....+..|...|.+++|+| ++++|++++.||.|++||
T Consensus        95 ~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d  169 (337)
T 1gxr_A           95 NRDNYIRSCKLLPDG----CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWD  169 (337)
T ss_dssp             CTTSBEEEEEECTTS----SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred             CCCCcEEEEEEcCCC----CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEe
Confidence            578999999999998    499999999999999999877  5667788999999999999 899999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +++++.+..+   ..|...|.+++|+|++++|++++.||.|++||+++++....+.                        
T Consensus       170 ~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------------------------  222 (337)
T 1gxr_A          170 LHNQTLVRQF---QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD------------------------  222 (337)
T ss_dssp             TTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------------
T ss_pred             CCCCceeeee---ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec------------------------
Confidence            9999888888   7899999999999999999999999999999999887654432                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                           +...+.+++|+  ++++++++.|+.|++||++..+             ...+..+...+..+++  +|++++|++
T Consensus       223 -----~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-------------~~~~~~~~~~v~~~~~--~~~~~~l~~  282 (337)
T 1gxr_A          223 -----FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-------------KYQLHLHESCVLSLKF--AYCGKWFVS  282 (337)
T ss_dssp             -----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-------------EEEECCCSSCEEEEEE--CTTSSEEEE
T ss_pred             -----CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-------------eEEEcCCccceeEEEE--CCCCCEEEE
Confidence                 67779999998  7799999999999999998764             2345667777776655  466999999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.||.|++||+.+++..    ..   ..|...|.+++|+|++++|++
T Consensus       283 ~~~dg~i~~~~~~~~~~~----~~---~~~~~~v~~~~~s~~~~~l~~  323 (337)
T 1gxr_A          283 TGKDNLLNAWRTPYGASI----FQ---SKESSSVLSCDISVDDKYIVT  323 (337)
T ss_dssp             EETTSEEEEEETTTCCEE----EE---EECSSCEEEEEECTTSCEEEE
T ss_pred             ecCCCcEEEEECCCCeEE----EE---ecCCCcEEEEEECCCCCEEEE
Confidence            999999999999987532    22   246789999999999999874

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.7e-36  Score=255.98  Aligned_cols=223  Identities=20%  Similarity=0.317  Sum_probs=190.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...+.+++|+|++    .+|++++.||.|++||. +++.+..+.+|...|.+++|+| ++++|++++.|+.|++||. 
T Consensus       342 ~~~~~v~~~~~s~~g----~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-  414 (577)
T 2ymu_A          342 GHSSSVWGVAFSPDG----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-  414 (577)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-
T ss_pred             CCCCCEEEEEECCCC----CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-
Confidence            467899999999998    49999999999999995 5788889999999999999999 9999999999999999996 


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++.+..+   .+|...|.+++|+|++++|++++.|+.|++||+.. +.+..                            
T Consensus       415 ~~~~~~~~---~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~----------------------------  462 (577)
T 2ymu_A          415 NGQLLQTL---TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQT----------------------------  462 (577)
T ss_dssp             TCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEE----------------------------
T ss_pred             CCCEEEEe---cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEE----------------------------
Confidence            46777776   78999999999999999999999999999999643 32222                            


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                      ..+|...|.+++|+  +++|++++.|+.|++||.. +            +.+..+.+|...|..++|+  |++++|++++
T Consensus       463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~------------~~~~~~~~h~~~v~~l~~s--~dg~~l~s~~  527 (577)
T 2ymu_A          463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G------------QLLQTLTGHSSSVRGVAFS--PDGQTIASAS  527 (577)
T ss_dssp             EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-S------------CEEEEEECCSSCEEEEEEC--TTSSCEEEEE
T ss_pred             EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-C------------CEEEEEeCCCCCEEEEEEc--CCCCEEEEEE
Confidence            23488999999998  7799999999999999953 3            3377888899888876655  6699999999


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .||.|++||.. ++    ....  ..+|.+.|++++|+|||++|++
T Consensus       528 ~dg~v~lwd~~-~~----~~~~--~~~h~~~v~~~~fs~dg~~l~s  566 (577)
T 2ymu_A          528 DDKTVKLWNRN-GQ----LLQT--LTGHSSSVWGVAFSPDGQTIAS  566 (577)
T ss_dssp             TTSEEEEECTT-SC----EEEE--EECCSSCEEEEEECTTSSCEEE
T ss_pred             CcCEEEEEeCC-CC----EEEE--EcCCCCCEEEEEEcCCCCEEEE
Confidence            99999999964 32    2233  3478999999999999999975

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.1e-36  Score=240.22  Aligned_cols=200  Identities=17%  Similarity=0.259  Sum_probs=175.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-CCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|.+.|.+++|+|++    ..|++++.|++|++||+++++.+..+.+|...|.+++|+|. ++.+|++|+.||.|++||+
T Consensus       152 ~h~~~v~~~~~~~~~----~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~  227 (354)
T 2pbi_B          152 MHTNYLSACSFTNSD----MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM  227 (354)
T ss_dssp             ECSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred             ccCCcEEEEEEeCCC----CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence            578899999999998    49999999999999999999999999999999999999883 3589999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ++++++..+   ..|...|.+++|+|++.+|++++.|++|++||++.++....+..                        
T Consensus       228 ~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~------------------------  280 (354)
T 2pbi_B          228 RSGQCVQAF---ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK------------------------  280 (354)
T ss_dssp             TTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC------------------------
T ss_pred             CCCcEEEEe---cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC------------------------
Confidence            999998888   78999999999999999999999999999999988754332210                        


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        ..+...+.+++|+  +.+|++++.|+.|++||+.++..            +..+.+|...|..++|+  |++++|++|
T Consensus       281 --~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~------------~~~l~~h~~~v~~l~~s--pdg~~l~sg  344 (354)
T 2pbi_B          281 --ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR------------VSILFGHENRVSTLRVS--PDGTAFCSG  344 (354)
T ss_dssp             --TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE------------EEEECCCSSCEEEEEEC--TTSSCEEEE
T ss_pred             --CCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce------------EEEEECCCCcEEEEEEC--CCCCEEEEE
Confidence              1134468899998  78999999999999999987744            67788899888877665  669999999


Q ss_pred             cCCCcEEEEE
Q psy10348        245 NQSGRTYVWD  254 (291)
Q Consensus       245 ~~dg~i~vwd  254 (291)
                      +.||+|++|+
T Consensus       345 s~D~~v~vW~  354 (354)
T 2pbi_B          345 SWDHTLRVWA  354 (354)
T ss_dssp             ETTSEEEEEC
T ss_pred             cCCCCEEecC
Confidence            9999999996

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.9e-36  Score=254.59  Aligned_cols=252  Identities=19%  Similarity=0.283  Sum_probs=198.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|++.|++++|+|++    ++||+|+.|+.|+|||. ++++++.+.+|...|++++|+| ++++|++++.|++|++||+ 
T Consensus        14 GH~~~V~~~a~spdg----~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i~vWd~-   86 (577)
T 2ymu_A           14 AHSSSVRGVAFSPDG----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-   86 (577)
T ss_dssp             CCSSCEEEEEECTTS----SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEET-
T ss_pred             CCCCcEEEEEECCCC----CEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEEC-
Confidence            589999999999999    59999999999999995 6889999999999999999999 9999999999999999996 


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc-----cccccCCCCccccccCc----
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA-----ESYTFNPARSTRPFDTQ----  158 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----  158 (291)
                      +++.+..+   .+|...|.+++|+|++++|++++.|+.+++|+...........     ....+.|+.........    
T Consensus        87 ~~~~~~~~---~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  163 (577)
T 2ymu_A           87 NGQLLQTL---TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV  163 (577)
T ss_dssp             TSCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred             CCCEEEEE---ECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence            47777777   7999999999999999999999999999999976543321111     12233333222211110    


Q ss_pred             ---cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        159 ---KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       159 ---~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                         ............|...|.++.++  ++++++++.|+.|++||...             ..+..+..|...+..++++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~-------------~~~~~~~~~~~~v~~~~~s  230 (577)
T 2ymu_A          164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-------------QLLQTLTGHSSSVRGVAFS  230 (577)
T ss_dssp             EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-------------CEEEEEECCSSCEEEEEEC
T ss_pred             eccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC-------------cEEEEEecCCCCEEEEEEC
Confidence               01112223345688899999998  77999999999999999643             3367778888888776654


Q ss_pred             ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        234 MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        |++++|++++.|+.|++||....       ......+|...|++++|+|++++|++
T Consensus       231 --~dg~~l~~~~~d~~i~~w~~~~~-------~~~~~~~~~~~v~~v~~~~d~~~l~~  279 (577)
T 2ymu_A          231 --PDGQTIASASDDKTVKLWNRNGQ-------LLQTLTGHSSSVNGVAFRPDGQTIAS  279 (577)
T ss_dssp             --TTSSCEEEEETTSCEEEECTTSC-------EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             --CCCCEEEEEeCCCEEEEEeCCCC-------EEEEEecCCCCEEEEEEcCCCCEEEE
Confidence              66999999999999999996542       22233478899999999999998874

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=3.6e-36  Score=243.17  Aligned_cols=235  Identities=16%  Similarity=0.241  Sum_probs=188.7

Q ss_pred             eecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCC-cEEEEeecC
Q psy10348          8 LIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDF-NLLLSVSKD   78 (291)
Q Consensus         8 ~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~d   78 (291)
                      .|.+.|++++|+| ++    .+|++|+.||.|++||+.++       +.+..+.+|...|.+++|+| ++ .+|++++.|
T Consensus        79 ~h~~~V~~~~~~p~~~----~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~d  153 (402)
T 2aq5_A           79 GHTAPVLDIAWCPHND----NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCD  153 (402)
T ss_dssp             CCSSCEEEEEECTTCT----TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETT
T ss_pred             cCCCCEEEEEeCCCCC----CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCC
Confidence            5889999999999 66    59999999999999999987       66888999999999999999 65 799999999


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      |.|++||+++++.+..+. ...|...|.+++|+|++++|++++.||.|++||+++++.+..+.                 
T Consensus       154 g~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----------------  215 (402)
T 2aq5_A          154 NVILVWDVGTGAAVLTLG-PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD-----------------  215 (402)
T ss_dssp             SCEEEEETTTTEEEEEEC-TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-----------------
T ss_pred             CEEEEEECCCCCccEEEe-cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec-----------------
Confidence            999999999998877761 03689999999999999999999999999999999887654431                 


Q ss_pred             cccCcccccccccCcc-eeEEEEc--CCEEEEe---cCCCeEEEecCCCCCccccccCCCceeeeeeec-CCcccEEEEE
Q psy10348        159 KEHFPQFSTRDIHRNY-VDCVRWL--GDFVLSK---SCENCIICWKPGRLEDKELRTNETNVTIINRLN-FKDCEIWFIR  231 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~  231 (291)
                                ..|... +.++.|+  +.++++|   +.|+.|++||+++....           +.... .+...+..+.
T Consensus       216 ----------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~~~v~~~~  274 (402)
T 2aq5_A          216 ----------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-----------LSLQELDTSSGVLLPF  274 (402)
T ss_dssp             ----------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-----------SEEEECCCCSSCEEEE
T ss_pred             ----------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-----------ceEEeccCCCceeEEE
Confidence                      125544 8889998  6688888   78999999999886541           11121 2444555554


Q ss_pred             EEecCCCcEEE-EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        232 FSMDYWQKILA-VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       232 ~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        ++|++++|+ +|+.||.|++||+.++++.   ...+....|..+|.+++|+|++.++++
T Consensus       275 --~s~~~~~l~~~g~~dg~i~i~d~~~~~~~---~~~l~~~~~~~~v~~~~~sp~~~~~~s  330 (402)
T 2aq5_A          275 --FDPDTNIVYLCGKGDSSIRYFEITSEAPF---LHYLSMFSSKESQRGMGYMPKRGLEVN  330 (402)
T ss_dssp             --EETTTTEEEEEETTCSCEEEEEECSSTTC---EEEEEEECCSSCCSEEEECCGGGSCGG
T ss_pred             --EcCCCCEEEEEEcCCCeEEEEEecCCCcc---eEeecccccCCcccceEEeccccccee
Confidence              456699886 5568999999999988641   233332236689999999999988763

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.8e-35  Score=233.72  Aligned_cols=228  Identities=21%  Similarity=0.294  Sum_probs=191.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      .|.+.|++++|+|+..   ++||+|+.||+|+|||+.+.+     +...+.+|...|.+++|+| ++.+|++++.|+.|+
T Consensus        36 GH~~~V~~v~~sp~~~---~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~  111 (340)
T 4aow_A           36 GHNGWVTQIATTPQFP---DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLR  111 (340)
T ss_dssp             CCSSCEEEEEECTTCT---TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred             CccCCEEEEEEeCCCC---CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccce
Confidence            3899999999999853   599999999999999987643     4667889999999999999 999999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +|+..........   ..+...+..+.+++++.+|++++.|+.+++||+........                       
T Consensus       112 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~-----------------------  165 (340)
T 4aow_A          112 LWDLTTGTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV-----------------------  165 (340)
T ss_dssp             EEETTTTEEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE-----------------------
T ss_pred             EEeecccceeeee---cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEE-----------------------
Confidence            9999988877776   67888999999999999999999999999999876543211                       


Q ss_pred             cccccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        163 PQFSTRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                          ...+|...+..++|.    ..++++++.|+.|++||+++.+            .+..+.+|...|..+++  +|++
T Consensus       166 ----~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~------------~~~~~~~h~~~v~~~~~--s~~~  227 (340)
T 4aow_A          166 ----QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK------------LKTNHIGHTGYLNTVTV--SPDG  227 (340)
T ss_dssp             ----CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCEEEEEE--CTTS
T ss_pred             ----EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc------------eeeEecCCCCcEEEEEE--CCCC
Confidence                123488889999997    3478999999999999998874            47788888888887665  4679


Q ss_pred             cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++|++|+.||.|++||+.+.+.    ...+.   +...|.+++|+|++.+++
T Consensus       228 ~~l~s~s~Dg~i~iwd~~~~~~----~~~~~---~~~~v~~~~~~~~~~~~~  272 (340)
T 4aow_A          228 SLCASGGKDGQAMLWDLNEGKH----LYTLD---GGDIINALCFSPNRYWLC  272 (340)
T ss_dssp             SEEEEEETTCEEEEEETTTTEE----EEEEE---CSSCEEEEEECSSSSEEE
T ss_pred             CEEEEEeCCCeEEEEEeccCce----eeeec---CCceEEeeecCCCCceee
Confidence            9999999999999999998742    23332   346899999999988775

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-35  Score=240.04  Aligned_cols=229  Identities=18%  Similarity=0.296  Sum_probs=190.5

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ...|...|++++|+|++    .+|++|+.||.|++||+.+++.+..+.+|...|.+++|++   ++|++|+.||.|++||
T Consensus       130 ~~~~~~~v~~v~~s~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d  202 (401)
T 4aez_A          130 ETDESTYVASVKWSHDG----SFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHD  202 (401)
T ss_dssp             ECCTTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEE
T ss_pred             ecCCCCCEEEEEECCCC----CEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEe
Confidence            33478899999999988    5999999999999999999999999999999999999965   6999999999999999


Q ss_pred             CC-CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++ .+..+..+   .+|...|.+++|+|++++|++++.|+.|++||+++++....+                        
T Consensus       203 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~------------------------  255 (401)
T 4aez_A          203 VRIANHQIGTL---QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK------------------------  255 (401)
T ss_dssp             TTSSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE------------------------
T ss_pred             cccCcceeeEE---cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe------------------------
Confidence            98 45556666   789999999999999999999999999999999987654433                        


Q ss_pred             cccccccCcceeEEEEc---CCEEEEec--CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        165 FSTRDIHRNYVDCVRWL---GDFVLSKS--CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~---~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                          ..|...|.+++|+   ..++++++  .|+.|++||+++++.            +..+. +...+..+  +++|+++
T Consensus       256 ----~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~------------~~~~~-~~~~v~~~--~~s~~~~  316 (401)
T 4aez_A          256 ----TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR------------VNTVD-AGSQVTSL--IWSPHSK  316 (401)
T ss_dssp             ----CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE------------EEEEE-CSSCEEEE--EECSSSS
T ss_pred             ----cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE------------EEEEe-CCCcEEEE--EECCCCC
Confidence                2488899999998   34777755  799999999988754            45554 33445554  5557799


Q ss_pred             EEEE--EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        240 ILAV--GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++  |+.||.|++||+.+++    ........+|...|.+++|+|+|++|++
T Consensus       317 ~l~~~~g~~dg~i~v~~~~~~~----~~~~~~~~~h~~~v~~~~~s~dg~~l~s  366 (401)
T 4aez_A          317 EIMSTHGFPDNNLSIWSYSSSG----LTKQVDIPAHDTRVLYSALSPDGRILST  366 (401)
T ss_dssp             EEEEEECTTTCEEEEEEEETTE----EEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred             eEEEEeecCCCcEEEEecCCcc----ceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence            9999  5589999999998863    2344444578899999999999999874

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=4.1e-36  Score=263.12  Aligned_cols=233  Identities=15%  Similarity=0.184  Sum_probs=200.7

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ....|.+.|.+++|+|++    ++||+|+.||.|+|||+.+++.+..+.+|..+|.+++|+| ++.+|++|+.||.|++|
T Consensus         8 ~~~~h~~~v~~i~~sp~~----~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw   82 (814)
T 3mkq_A            8 TFSNRSDRVKGIDFHPTE----PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVF   82 (814)
T ss_dssp             EEEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEE
T ss_pred             eeecCCCceEEEEECCCC----CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEE
Confidence            345689999999999998    5999999999999999999999999999999999999999 89999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccccCccccCc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      |+.+++.+..+   .+|...|.+++|+|++++|++++.||.|++||++++. ....                        
T Consensus        83 ~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~------------------------  135 (814)
T 3mkq_A           83 NYNTGEKVVDF---EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT------------------------  135 (814)
T ss_dssp             ETTTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE------------------------
T ss_pred             ECCCCcEEEEE---ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE------------------------
Confidence            99999998888   7899999999999999999999999999999998762 2222                        


Q ss_pred             ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCc
Q psy10348        164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~  239 (291)
                          ..+|...|.+++|+   ++.+++++.|+.|++||+.....            ...+.. +...+..+++++.+++.
T Consensus       136 ----~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~  199 (814)
T 3mkq_A          136 ----FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP------------NFTLTTGQERGVNYVDYYPLPDKP  199 (814)
T ss_dssp             ----EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC------------SEEEECCCTTCCCEEEECCSTTCC
T ss_pred             ----EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc------------eeEEecCCCCCEEEEEEEECCCCC
Confidence                23488999999997   45999999999999999987654            333333 33677788888766899


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++|+.||.|++||+.+++.    ...  ..+|...|.+++|+|+|++|++
T Consensus       200 ~l~~~~~dg~i~~~d~~~~~~----~~~--~~~~~~~v~~~~~~~~~~~l~~  245 (814)
T 3mkq_A          200 YMITASDDLTIKIWDYQTKSC----VAT--LEGHMSNVSFAVFHPTLPIIIS  245 (814)
T ss_dssp             EEEEECTTSEEEEEETTTTEE----EEE--EECCSSCEEEEEECSSSSEEEE
T ss_pred             EEEEEeCCCEEEEEECCCCcE----EEE--EcCCCCCEEEEEEcCCCCEEEE
Confidence            999999999999999988742    233  3367889999999999998874

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-37  Score=257.56  Aligned_cols=236  Identities=14%  Similarity=0.096  Sum_probs=175.7

Q ss_pred             eeeeecceeEEEEeeeccCCC-----CCEEEE-------------------ecCCCeEEEEccCCccee----EEEeeec
Q psy10348          5 YSLLIEENFYTCAWSMDLESG-----RPLLAV-------------------AGSRAVIRIFSPAFHACV----RHFYGHG   56 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~-----~~~l~~-------------------~~~dg~i~vw~~~~~~~~----~~~~~~~   56 (291)
                      +.+.+.+.|.+++|+|+....     +++||+                   ++.|++|+||++.+++..    ..+..|.
T Consensus       128 ~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~  207 (524)
T 2j04_B          128 FIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF  207 (524)
T ss_dssp             EEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC
T ss_pred             EEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC
Confidence            355668899999999986211     135544                   567899999999877643    3466778


Q ss_pred             cceeEEEEecC-----CCcEEEEeecCCeEEEEECCCccee-----------eeeccccCCCCceEEEEEccCCCEEEEE
Q psy10348         57 HAINELKFHPQ-----DFNLLLSVSKDHTLRLWNIKTDICI-----------AIFGGVEGHRDEVLSADFDLLGTKIMSC  120 (291)
Q Consensus        57 ~~v~~~~~~~~-----~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~  120 (291)
                      +.|.+++|+|.     ++.+||+++.||+|++||+..+...           ..+   .+|...|.+++|+++ ..|++|
T Consensus       208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l---~~h~~~v~sv~~s~~-~~lasg  283 (524)
T 2j04_B          208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL---SLADSLITTFDFLSP-TTVVCG  283 (524)
T ss_dssp             CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE---CCTTTCEEEEEESSS-SEEEEE
T ss_pred             CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE---EcCCCCEEEEEecCC-CeEEEE
Confidence            99999999993     2579999999999999999866421           233   689999999999986 489999


Q ss_pred             ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE--Ec--C-CEEEEecCCCeEE
Q psy10348        121 GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR--WL--G-DFVLSKSCENCII  195 (291)
Q Consensus       121 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~-~~l~~~~~d~~i~  195 (291)
                      +.||+|++||++++....                           ..+.+|...|.+++  |+  + .+|++++.|++|+
T Consensus       284 s~DgtV~lWD~~~~~~~~---------------------------~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk  336 (524)
T 2j04_B          284 FKNGFVAEFDLTDPEVPS---------------------------FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY  336 (524)
T ss_dssp             ETTSEEEEEETTBCSSCS---------------------------EEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred             eCCCEEEEEECCCCCCce---------------------------EEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence            999999999998753211                           11245999999994  55  4 6899999999999


Q ss_pred             EecCCCCCccccccCCCceeeeeeecCCcc--cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc
Q psy10348        196 CWKPGRLEDKELRTNETNVTIINRLNFKDC--EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC  273 (291)
Q Consensus       196 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  273 (291)
                      +||+++.+.            +..+.++..  .+..++  ++|+++.+++++.|++|++||++++.+.    ..+.  +|
T Consensus       337 lWD~~~~~~------------~~~~~~~~~~~~v~~v~--fsp~~~~l~s~~~d~tv~lwd~~~~~~~----~~l~--gH  396 (524)
T 2j04_B          337 IFNPKDIAT------------TKTTVSRFRGSNLVPVV--YCPQIYSYIYSDGASSLRAVPSRAAFAV----HPLV--SR  396 (524)
T ss_dssp             EECGGGHHH------------HCEEEEECSCCSCCCEE--EETTTTEEEEECSSSEEEEEETTCTTCC----EEEE--EC
T ss_pred             EEECCCCCc------------ccccccccccCcccceE--eCCCcCeEEEeCCCCcEEEEECcccccc----eeee--cC
Confidence            999987644            223333322  244444  4577999999999999999999987643    2333  68


Q ss_pred             ccceeeeEEccCCceeeC
Q psy10348        274 MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~s  291 (291)
                      .+.|++|+|||+|++|++
T Consensus       397 ~~~V~sva~Sp~g~~l~S  414 (524)
T 2j04_B          397 ETTITAIGVSRLHPMVLA  414 (524)
T ss_dssp             SSCEEEEECCSSCCBCEE
T ss_pred             CCceEEEEeCCCCCeEEE
Confidence            899999999999998874

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-35  Score=236.30  Aligned_cols=239  Identities=10%  Similarity=0.180  Sum_probs=199.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|++++|+|++    ++|++++.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+
T Consensus        29 ~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~  103 (369)
T 3zwl_B           29 TGHERPLTQVKYNKEG----DLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV  103 (369)
T ss_dssp             ECCSSCEEEEEECTTS----CEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred             EEeeceEEEEEEcCCC----CEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence            3588999999999998    5999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      .+++.+..+    .+...|.+++|+|++++|++++.+     +.|++||+........+...                 .
T Consensus       104 ~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-----------------~  162 (369)
T 3zwl_B          104 SNGQCVATW----KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV-----------------S  162 (369)
T ss_dssp             TTCCEEEEE----ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE-----------------C
T ss_pred             CCCcEEEEe----ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc-----------------c
Confidence            999998887    388999999999999999999998     99999999887654433210                 0


Q ss_pred             CcccccccccCc--ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        162 FPQFSTRDIHRN--YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       162 ~~~~~~~~~~~~--~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                      .........|..  .+.+++|+  ++++++++.||.|++||+++..           ..+..+..+...+..++++  |+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~~v~~~~~~--~~  229 (369)
T 3zwl_B          163 EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-----------EYVDSIDLHEKSISDMQFS--PD  229 (369)
T ss_dssp             SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT-----------EEEEEEECCSSCEEEEEEC--TT
T ss_pred             cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-----------EeEEEEecCCCceeEEEEC--CC
Confidence            011122223444  89999998  7799999999999999998732           3377778888888776555  66


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.+|++++.||.|++||+.+++.    ...+.   +...+.+++|+|+++++++
T Consensus       230 ~~~l~~~~~d~~i~v~d~~~~~~----~~~~~---~~~~~~~~~~~~~~~~l~~  276 (369)
T 3zwl_B          230 LTYFITSSRDTNSFLVDVSTLQV----LKKYE---TDCPLNTAVITPLKEFIIL  276 (369)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCE----EEEEE---CSSCEEEEEECSSSSEEEE
T ss_pred             CCEEEEecCCceEEEEECCCCce----eeeec---CCCCceeEEecCCCceEEE
Confidence            99999999999999999998753    23333   5578999999999999873

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.4e-35  Score=233.87  Aligned_cols=227  Identities=16%  Similarity=0.222  Sum_probs=188.6

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce---eEEEe--eeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC---VRHFY--GHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~---~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      ...|.+.|++++|+|++    +++++++ ||.|++||+.+++.   +..+.  .|...|.+++|+| ++++|++++.||.
T Consensus        47 ~~~h~~~v~~~~~~~~~----~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~  120 (337)
T 1gxr_A           47 TLNHGEVVCAVTISNPT----RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEAST  120 (337)
T ss_dssp             EECCSSCCCEEEECSSS----SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSE
T ss_pred             eccCCCceEEEEEecCC----cEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCc
Confidence            45689999999999998    4999998 99999999987653   34444  7889999999999 8999999999999


Q ss_pred             EEEEECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         81 LRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        81 i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      |++||+.+++  ....+   ..|...|.+++|+|++++|++++.||.|++||+++++....+                  
T Consensus       121 i~~~d~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~------------------  179 (337)
T 1gxr_A          121 LSIWDLAAPTPRIKAEL---TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF------------------  179 (337)
T ss_dssp             EEEEECCCC--EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------
T ss_pred             EEEEECCCCCcceeeec---ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee------------------
Confidence            9999999876  44444   689999999999999999999999999999999987755443                  


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                                ..|...|.+++|+  ++++++++.|+.|++||+++.+.            +..+. +...+..  ++++|
T Consensus       180 ----------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~------------~~~~~-~~~~v~~--~~~s~  234 (337)
T 1gxr_A          180 ----------QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ------------LQQHD-FTSQIFS--LGYCP  234 (337)
T ss_dssp             ----------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------------EEEEE-CSSCEEE--EEECT
T ss_pred             ----------ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce------------Eeeec-CCCceEE--EEECC
Confidence                      2488899999998  77999999999999999988743            34443 3444555  45567


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++|++++.||.|++||+.+.+.       .....|...|.+++|+|++++|++
T Consensus       235 ~~~~l~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~  282 (337)
T 1gxr_A          235 TGEWLAVGMESSNVEVLHVNKPDK-------YQLHLHESCVLSLKFAYCGKWFVS  282 (337)
T ss_dssp             TSSEEEEEETTSCEEEEETTSSCE-------EEECCCSSCEEEEEECTTSSEEEE
T ss_pred             CCCEEEEEcCCCcEEEEECCCCCe-------EEEcCCccceeEEEECCCCCEEEE
Confidence            799999999999999999998742       233478889999999999998874

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=8.8e-36  Score=242.19  Aligned_cols=234  Identities=13%  Similarity=0.104  Sum_probs=189.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    .+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||++
T Consensus       137 ~h~~~v~~~~~~~~~----~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~  211 (420)
T 3vl1_A          137 AHVSEITKLKFFPSG----EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG  211 (420)
T ss_dssp             SSSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETT
T ss_pred             cccCccEEEEECCCC----CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECC
Confidence            588999999999998    5999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEE---------------------EccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSAD---------------------FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~---------------------~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      +++.+..+.....+...|.+++                     |+|++++|++++.||.|++||+++++....+.     
T Consensus       212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----  286 (420)
T 3vl1_A          212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP-----  286 (420)
T ss_dssp             TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC-----
T ss_pred             CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc-----
Confidence            9998888743334555555554                     57889999999999999999999877544332     


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-  222 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-  222 (291)
                                            ..|...|.+++|+  +. +|++++.||.|++||+++.+..           +..+.. 
T Consensus       287 ----------------------~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~-----------~~~~~~~  333 (420)
T 3vl1_A          287 ----------------------SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP-----------VGEFLIN  333 (420)
T ss_dssp             ----------------------CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC-----------SEEEEES
T ss_pred             ----------------------cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc-----------hhhhhcc
Confidence                                  2378889999998  44 9999999999999999886532           444544 


Q ss_pred             CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee---EEEeccccccceeeeEEccCCc
Q psy10348        223 KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF---QILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       223 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                      +...+..+.+   +++++|++++.||.|++|++..........   .......|.+.|.+++|+|+++
T Consensus       334 ~~~~v~~~~~---~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  398 (420)
T 3vl1_A          334 EGTPINNVYF---AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE  398 (420)
T ss_dssp             TTSCEEEEEE---ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred             CCCCceEEEe---CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence            5566666633   348899999999999999998754321110   1112236778999999999999

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=2.2e-35  Score=237.07  Aligned_cols=209  Identities=15%  Similarity=0.158  Sum_probs=171.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|++++|+|++.   .+|++|+.||.|++||+.+++....+.  +|...|.+++|+|.++.+|++++.|+.|++||
T Consensus        71 ~h~~~v~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd  147 (383)
T 3ei3_B           71 PFDRRVTSLEWHPTHP---TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD  147 (383)
T ss_dssp             CCSSCEEEEEECSSCT---TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred             CCCCCEEEEEECCCCC---CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence            5789999999999973   499999999999999999888877775  69999999999996679999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ++. ..+..+.....|...|.+++|+|++++|++++.|+.|++||++ ++....+                         
T Consensus       148 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------------------------  200 (383)
T 3ei3_B          148 FSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKE-------------------------  200 (383)
T ss_dssp             TTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEE-------------------------
T ss_pred             CCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEe-------------------------
Confidence            985 5555554334566889999999999999999999999999994 3333222                         


Q ss_pred             ccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC-CCcEE
Q psy10348        166 STRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY-WQKIL  241 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~l  241 (291)
                         ..|...|.+++|+  ++ ++++++.|+.|++||+++.+..        ...+..+ .|...+..++++  | ++.+|
T Consensus       201 ---~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--------~~~~~~~-~~~~~v~~~~~s--~~~~~~l  266 (383)
T 3ei3_B          201 ---KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK--------NSYIAEM-PHEKPVNAAYFN--PTDSTKL  266 (383)
T ss_dssp             ---ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST--------TCEEEEE-ECSSCEEEEEEC--TTTSCEE
T ss_pred             ---ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc--------cceEEEe-cCCCceEEEEEc--CCCCCEE
Confidence               3488999999998  55 8999999999999999874321        0224444 466777766554  6 69999


Q ss_pred             EEEcCCCcEEEEEcCCCCC
Q psy10348        242 AVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~  260 (291)
                      ++++.||.|++||+.+++.
T Consensus       267 ~~~~~d~~i~iwd~~~~~~  285 (383)
T 3ei3_B          267 LTTDQRNEIRVYSSYDWSK  285 (383)
T ss_dssp             EEEESSSEEEEEETTBTTS
T ss_pred             EEEcCCCcEEEEECCCCcc
Confidence            9999999999999987654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-36  Score=246.17  Aligned_cols=242  Identities=16%  Similarity=0.287  Sum_probs=196.3

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      ..+.|...|++++|+|++    .+|++|+.||.|++||+.+    .+.+..+.+|...|.+++|+|+++.+|++++.||.
T Consensus        62 ~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  137 (416)
T 2pm9_A           62 ASLQVDSKFNDLDWSHNN----KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE  137 (416)
T ss_dssp             CCCCCSSCEEEEEECSSS----SCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC
T ss_pred             EEEecCCceEEEEECCCC----CeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe
Confidence            345688999999999998    4999999999999999987    35778888999999999999943899999999999


Q ss_pred             EEEEECCCcc------eeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccc
Q psy10348         81 LRLWNIKTDI------CIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR  153 (291)
Q Consensus        81 i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~  153 (291)
                      |++||+.+++      ....+.....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+....         
T Consensus       138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~---------  208 (416)
T 2pm9_A          138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS---------  208 (416)
T ss_dssp             EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC---------
T ss_pred             EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc---------
Confidence            9999999876      33333333679999999999999 7899999999999999999887655443100         


Q ss_pred             cccCccccCcccccccccCcceeEEEEc--C-CEEEEecCCC---eEEEecCCCCCccccccCCCceeeeeeec-CCccc
Q psy10348        154 PFDTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCEN---CIICWKPGRLEDKELRTNETNVTIINRLN-FKDCE  226 (291)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  226 (291)
                                   ...+|...|.+++|+  + .++++++.|+   .|++||+++....           +..+. .|...
T Consensus       209 -------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-----------~~~~~~~~~~~  264 (416)
T 2pm9_A          209 -------------PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-----------LQTLNQGHQKG  264 (416)
T ss_dssp             -------------CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-----------SBCCCSCCSSC
T ss_pred             -------------cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-----------cEEeecCccCc
Confidence                         012347889999998  3 4899999998   9999999886322           55566 77777


Q ss_pred             EEEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC-ceeeC
Q psy10348        227 IWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG-NVLLC  291 (291)
Q Consensus       227 i~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~s  291 (291)
                      +..++++  | ++++|++++.||.|++||+.+++.    ...  ...|...|.+++|+|++ ++|++
T Consensus       265 v~~~~~s--~~~~~~l~s~~~dg~v~~wd~~~~~~----~~~--~~~~~~~v~~~~~s~~~~~~l~s  323 (416)
T 2pm9_A          265 ILSLDWC--HQDEHLLLSSGRDNTVLLWNPESAEQ----LSQ--FPARGNWCFKTKFAPEAPDLFAC  323 (416)
T ss_dssp             EEEEEEC--SSCSSCEEEEESSSEEEEECSSSCCE----EEE--EECSSSCCCCEEECTTCTTEEEE
T ss_pred             eeEEEeC--CCCCCeEEEEeCCCCEEEeeCCCCcc----cee--ecCCCCceEEEEECCCCCCEEEE
Confidence            7776665  5 699999999999999999998752    222  33678899999999999 67763

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-35  Score=239.41  Aligned_cols=254  Identities=15%  Similarity=0.209  Sum_probs=196.3

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEcc----CCcc------eeEEEee----------eccceeEEEEec
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSP----AFHA------CVRHFYG----------HGHAINELKFHP   66 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~----~~~~------~~~~~~~----------~~~~v~~~~~~~   66 (291)
                      ..|.+.|++++|+|++.   .+||+|+.||.|++|++    .+++      ....+..          |.+.|.+++|+|
T Consensus        42 ~~~~~~v~~~~~s~~~~---~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  118 (425)
T 1r5m_A           42 IVKLDNIVSSTWNPLDE---SILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH  118 (425)
T ss_dssp             EEECSCCSEEEECSSCT---TEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred             eeccCceEEEEECCCCC---cEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence            34568999999999983   39999999999999999    8887      4555554          678999999999


Q ss_pred             CCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc---
Q psy10348         67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES---  143 (291)
Q Consensus        67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---  143 (291)
                       ++.+|++++.||.|++|| .+++.+..+   ..|...|.+++|+|++++|++++.|+.|++||+++++....+...   
T Consensus       119 -~~~~l~~~~~dg~i~i~~-~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  193 (425)
T 1r5m_A          119 -DGNSIVTGVENGELRLWN-KTGALLNVL---NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG  193 (425)
T ss_dssp             -TSSEEEEEETTSCEEEEE-TTSCEEEEE---CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred             -CCCEEEEEeCCCeEEEEe-CCCCeeeec---cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence             999999999999999999 567777777   789999999999999999999999999999999988766544321   


Q ss_pred             ------------------cccCCCCc---------cccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348        144 ------------------YTFNPARS---------TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCI  194 (291)
Q Consensus       144 ------------------~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i  194 (291)
                                        +.+.++..         ...+...  ..........|...|.+++|+  +++|++++.|+.|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  271 (425)
T 1r5m_A          194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQIT--EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL  271 (425)
T ss_dssp             ------------CCCBSCCEEEETTEEEEECGGGCEEEEETT--CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcC--CCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence                              11111111         0000100  112233445789999999998  7799999999999


Q ss_pred             EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348        195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM  274 (291)
Q Consensus       195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~  274 (291)
                      ++||++..+.            +..+..+...+..+++.  |++ ++++++.||.|++||+.+++.    ...+  ..|.
T Consensus       272 ~i~d~~~~~~------------~~~~~~~~~~i~~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~----~~~~--~~~~  330 (425)
T 1r5m_A          272 RIWHGGNGNS------------QNCFYGHSQSIVSASWV--GDD-KVISCSMDGSVRLWSLKQNTL----LALS--IVDG  330 (425)
T ss_dssp             EEECSSSBSC------------SEEECCCSSCEEEEEEE--TTT-EEEEEETTSEEEEEETTTTEE----EEEE--ECTT
T ss_pred             EEEECCCCcc------------ceEecCCCccEEEEEEC--CCC-EEEEEeCCCcEEEEECCCCcE----eEec--ccCC
Confidence            9999988754            66677788888777766  557 999999999999999988742    2233  3677


Q ss_pred             cceeeeEEccCCceeeC
Q psy10348        275 SAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       275 ~~v~~~~~s~~g~~l~s  291 (291)
                      ..|.+++|+|++++|++
T Consensus       331 ~~i~~~~~s~~~~~l~~  347 (425)
T 1r5m_A          331 VPIFAGRISQDGQKYAV  347 (425)
T ss_dssp             CCEEEEEECTTSSEEEE
T ss_pred             ccEEEEEEcCCCCEEEE
Confidence            89999999999999874

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=2.1e-35  Score=254.25  Aligned_cols=236  Identities=21%  Similarity=0.293  Sum_probs=186.9

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|...|.+++|+|++    ++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||.
T Consensus       427 ~~h~~~v~~v~~s~~g----~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~  501 (694)
T 3dm0_A          427 TGHSHFVEDVVLSSDG----QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNT  501 (694)
T ss_dssp             ECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECT
T ss_pred             cCCCCcEEEEEECCCC----CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEC
Confidence            3588999999999998    5999999999999999999999999999999999999999 8999999999999999998


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCC--CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLG--TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      .............+|...|.+++|+|++  ..|++++.|+.|++||+++++....+                        
T Consensus       502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~------------------------  557 (694)
T 3dm0_A          502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL------------------------  557 (694)
T ss_dssp             TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE------------------------
T ss_pred             CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE------------------------
Confidence            7554443333335799999999999987  58999999999999999887654433                        


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                          .+|...|++++|+  +++|++++.|+.|++||+++++.            +..+..+ ..+..+  +++|++.+|+
T Consensus       558 ----~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~------------~~~~~~~-~~v~~~--~~sp~~~~l~  618 (694)
T 3dm0_A          558 ----AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK------------LYSLEAN-SVIHAL--CFSPNRYWLC  618 (694)
T ss_dssp             ----CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE------------EECCBCS-SCEEEE--EECSSSSEEE
T ss_pred             ----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce------------EEEecCC-CcEEEE--EEcCCCcEEE
Confidence                3599999999998  78999999999999999988743            4444433 345554  5557788888


Q ss_pred             EEcCCCcEEEEEcCCCCCCcceeEEE-------------eccccccceeeeEEccCCceeeC
Q psy10348        243 VGNQSGRTYVWDLDVQDPSSIKFQIL-------------SHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +++ |+.|++||+.+++.+.......             ....+...+++++|||||++|++
T Consensus       619 ~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s  679 (694)
T 3dm0_A          619 AAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS  679 (694)
T ss_dssp             EEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred             EEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence            776 4569999999875322110000             00011224789999999999985

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.2e-35  Score=239.66  Aligned_cols=234  Identities=10%  Similarity=0.165  Sum_probs=189.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc------eeEEEeeeccceeEEEEecCC----C---cEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA------CVRHFYGHGHAINELKFHPQD----F---NLLLS   74 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~~----~---~~l~s   74 (291)
                      .|.+.|++++|+| .     +|++|+.||.|++|++.+++      .+..+.+|...|.+++|+| +    +   .+|++
T Consensus        14 ~h~~~i~~~~~~~-~-----~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s   86 (397)
T 1sq9_A           14 AHDADIFSVSACN-S-----FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVAT   86 (397)
T ss_dssp             CSSSCEEEEEECS-S-----EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEE
T ss_pred             hhhcCeEEEEecC-C-----eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEEE
Confidence            5889999999998 3     99999999999999999887      7888899999999999999 7    8   99999


Q ss_pred             eecCCeEEEEECCCcce-----eeeeccccCC-----CCceEEEEEc----cCCCE-EEEEecCCcEEEEeccC------
Q psy10348         75 VSKDHTLRLWNIKTDIC-----IAIFGGVEGH-----RDEVLSADFD----LLGTK-IMSCGMDHSLKLWDLTK------  133 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~-----~~~~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~d~~i~v~d~~~------  133 (291)
                      ++.||.|++||+.+++.     ...+   ..|     ...|.+++|+    |++++ |++++.||.|++||+++      
T Consensus        87 ~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  163 (397)
T 1sq9_A           87 TSFSGDLLFYRITREDETKKVIFEKL---DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN  163 (397)
T ss_dssp             EETTSCEEEEEEEECTTTCCEEEEEE---CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred             EcCCCCEEEEEccCCcccccccceee---cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence            99999999999998876     6666   567     6999999999    99999 99999999999999998      


Q ss_pred             chhhh-----hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccc
Q psy10348        134 PEIKD-----ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKE  206 (291)
Q Consensus       134 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~  206 (291)
                      ++.+.     .+...                     ......|...|.+++|+  + ++++++.|+.|++||+++.+   
T Consensus       164 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~---  218 (397)
T 1sq9_A          164 SLTLNWSPTLELQGT---------------------VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR---  218 (397)
T ss_dssp             HTTTCCCCEEEEEEE---------------------ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE---
T ss_pred             cceeeccCcceeeee---------------------eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc---
Confidence            54433     11100                     00112378889999998  6 99999999999999998763   


Q ss_pred             cccCCCceeeeeeecC---C---cccEEEEEEEecCCCcEEEEEcCC---CcEEEEEcCCCCCCcceeEEEecc------
Q psy10348        207 LRTNETNVTIINRLNF---K---DCEIWFIRFSMDYWQKILAVGNQS---GRTYVWDLDVQDPSSIKFQILSHP------  271 (291)
Q Consensus       207 ~~~~~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~------  271 (291)
                               .+..+..   |   ...+..++++  |++++|++++.|   |.|++||+.+++.    ...+...      
T Consensus       219 ---------~~~~~~~~~~h~~~~~~i~~i~~~--~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~  283 (397)
T 1sq9_A          219 ---------PLYNFESQHSMINNSNSIRSVKFS--PQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQA  283 (397)
T ss_dssp             ---------EEEEEECCC---CCCCCEEEEEEC--SSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC------
T ss_pred             ---------eeEEEeccccccccCCccceEEEC--CCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCcccccc
Confidence                     3667776   6   7777766655  669999999999   9999999998753    2233211      


Q ss_pred             -----ccccceeeeEEccCCceeeC
Q psy10348        272 -----RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       272 -----~~~~~v~~~~~s~~g~~l~s  291 (291)
                           .|...|.+++|+|++++|++
T Consensus       284 ~~~~~~~~~~v~~~~~~~~~~~l~~  308 (397)
T 1sq9_A          284 SLGEFAHSSWVMSLSFNDSGETLCS  308 (397)
T ss_dssp             --CCBSBSSCEEEEEECSSSSEEEE
T ss_pred             cccccccCCcEEEEEECCCCCEEEE
Confidence                 18889999999999999874

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=2.9e-35  Score=232.73  Aligned_cols=234  Identities=10%  Similarity=-0.018  Sum_probs=186.9

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLR   82 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~   82 (291)
                      ..|.+.|++++|+|++    .+|++++.||.|++|++.+++   ....+..|...|.+++|+| ++. +|++|+.||.|+
T Consensus         8 ~~h~~~v~~~~~s~~~----~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~   82 (342)
T 1yfq_A            8 QAPKDYISDIKIIPSK----SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             SCCSSCEEEEEEEGGG----TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEE
T ss_pred             cCCCCcEEEEEEcCCC----CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEE
Confidence            3688999999999998    499999999999999998776   3455668999999999999 889 999999999999


Q ss_pred             EEEC-CCcceeeeeccccC--CCCceEEEEEccCCCEEEEEecCCcEEEEeccC---------chhhhhhccccccCCCC
Q psy10348         83 LWNI-KTDICIAIFGGVEG--HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK---------PEIKDACAESYTFNPAR  150 (291)
Q Consensus        83 vwd~-~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~~~~~~  150 (291)
                      +||+ .+++. ..+   .+  |...|.+++|+| +.+|++++.|+.|++||+++         ++.+..+.         
T Consensus        83 ~wd~~~~~~~-~~~---~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---------  148 (342)
T 1yfq_A           83 KVDLIGSPSF-QAL---TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---------  148 (342)
T ss_dssp             EECSSSSSSE-EEC---BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---------
T ss_pred             EEEeccCCce-Eec---cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---------
Confidence            9999 87655 444   57  999999999999 99999999999999999986         44332221         


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCC-CCccccccCCCceeeeeeecCCcccEEE
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                                          |...|.+++|+++.+++++.|+.|++||++. ....          .......+...+..
T Consensus       149 --------------------~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----------~~~~~~~~~~~i~~  198 (342)
T 1yfq_A          149 --------------------VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN----------GTIEESGLKYQIRD  198 (342)
T ss_dssp             --------------------SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCC----------CEEEECSCSSCEEE
T ss_pred             --------------------eCCceEEEEecCCcEEEEeCCCeEEEEECCcccccc----------ceeeecCCCCceeE
Confidence                                7788999999977799999999999999987 4331          12333445566665


Q ss_pred             EEEEecC-CCcEEEEEcCCCcEEEEEcCCC--CCCcceeEEEecc-------ccccceeeeEEccCCceeeC
Q psy10348        230 IRFSMDY-WQKILAVGNQSGRTYVWDLDVQ--DPSSIKFQILSHP-------RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       230 ~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~-------~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +++  +| +++++++++.||.|++|++...  .........+...       .|...|.+++|+|++++|++
T Consensus       199 i~~--~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  268 (342)
T 1yfq_A          199 VAL--LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT  268 (342)
T ss_dssp             EEE--CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE
T ss_pred             EEE--CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE
Confidence            555  56 6999999999999999999876  1111222333321       23459999999999998874

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=8.2e-36  Score=237.84  Aligned_cols=251  Identities=12%  Similarity=0.184  Sum_probs=196.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-----cceeEEEEecCC----CcEEEEeecC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-----HAINELKFHPQD----FNLLLSVSKD   78 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~----~~~l~s~~~d   78 (291)
                      .|.++|++++|+|+...+...+++++.++.|++||+.+++.+..+..|.     ..|.+++|+| +    +.+|++|+.|
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~~d   94 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTY-DSNTSHPLLAVAGSR   94 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEE-CTTTCCEEEEEEETT
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEecc-CCCCCCCEEEEecCC
Confidence            4889999999999622222578888888899999999988887777544     6799999999 6    6799999999


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      |.|++||+.+++.+..+   .+|...|.+++|+| ++.+|++++.||.|++||+++++....+.                
T Consensus        95 g~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------  155 (366)
T 3k26_A           95 GIIRIINPITMQCIKHY---VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG----------------  155 (366)
T ss_dssp             CEEEEECTTTCCEEEEE---ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC----------------
T ss_pred             CEEEEEEchhceEeeee---cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec----------------
Confidence            99999999999998888   68999999999999 89999999999999999999887554431                


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC----------------CCceeeeee
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN----------------ETNVTIINR  219 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------------~~~~~~~~~  219 (291)
                               ....|...|.+++|+  +++|++++.|+.|++||+++.+.......                .........
T Consensus       156 ---------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (366)
T 3k26_A          156 ---------GVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST  226 (366)
T ss_dssp             ---------STTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred             ---------ccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence                     113488999999998  77999999999999999987643311000                000011233


Q ss_pred             ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc--------ceeEEEeccccccceeeeEEccC--Ccee
Q psy10348        220 LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS--------IKFQILSHPRCMSAVRQTTLSKN--GNVL  289 (291)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--------~~~~~~~~~~~~~~v~~~~~s~~--g~~l  289 (291)
                      ...|...+..+++.    +++|++++.||.|++||+.+.+...        ..........|...|++++|+|+  |++|
T Consensus       227 ~~~~~~~v~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l  302 (366)
T 3k26_A          227 RDIHRNYVDCVRWL----GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML  302 (366)
T ss_dssp             CSSCSSCCCEEEEE----TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred             ccCCcceEEEEEEc----CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence            44577778777775    6799999999999999998865311        11123334477889999999999  9998


Q ss_pred             eC
Q psy10348        290 LC  291 (291)
Q Consensus       290 ~s  291 (291)
                      ++
T Consensus       303 ~~  304 (366)
T 3k26_A          303 AL  304 (366)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.6e-36  Score=248.12  Aligned_cols=202  Identities=9%  Similarity=0.045  Sum_probs=166.1

Q ss_pred             ecceeEEEEeeeccC--CCCCEEEEecCCCeEEEEccCCcce-----------eEEEeeeccceeEEEEecCCCcEEEEe
Q psy10348          9 IEENFYTCAWSMDLE--SGRPLLAVAGSRAVIRIFSPAFHAC-----------VRHFYGHGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~--~~~~~l~~~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      |.+.|.+++|+|++.  +++.+||+++.||+|+|||+.+++.           ...+.+|...|++++|++ + ..|++|
T Consensus       206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasg  283 (524)
T 2j04_B          206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCG  283 (524)
T ss_dssp             CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEE
T ss_pred             cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEE
Confidence            468899999999732  2346999999999999999986642           246788999999999998 5 489999


Q ss_pred             ecCCeEEEEECCCcce-eeeeccccCCCCceEEE--EEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348         76 SKDHTLRLWNIKTDIC-IAIFGGVEGHRDEVLSA--DFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS  151 (291)
Q Consensus        76 ~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~  151 (291)
                      +.||+|++||++++.. ...+   .+|...|.++  .|+|++ .+|++|+.|++|++||+++++....+..         
T Consensus       284 s~DgtV~lWD~~~~~~~~~~~---~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~---------  351 (524)
T 2j04_B          284 FKNGFVAEFDLTDPEVPSFYD---QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS---------  351 (524)
T ss_dssp             ETTSEEEEEETTBCSSCSEEE---ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE---------
T ss_pred             eCCCEEEEEECCCCCCceEEe---ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc---------
Confidence            9999999999997643 3445   6899999999  578887 8999999999999999998876554321         


Q ss_pred             cccccCccccCcccccccccC--cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHR--NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                                         |.  ..|.+++|+  ++.+++++.|++|++||++....            +..+.+|...|
T Consensus       352 -------------------~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~------------~~~l~gH~~~V  400 (524)
T 2j04_B          352 -------------------RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA------------VHPLVSRETTI  400 (524)
T ss_dssp             -------------------ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC------------CEEEEECSSCE
T ss_pred             -------------------ccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc------------ceeeecCCCce
Confidence                               32  247889998  56899999999999999988754            56677888888


Q ss_pred             EEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      +.++|  +|++++|++|+.||+|++||+..
T Consensus       401 ~sva~--Sp~g~~l~Sgs~Dgtv~lwd~~~  428 (524)
T 2j04_B          401 TAIGV--SRLHPMVLAGSADGSLIITNAAR  428 (524)
T ss_dssp             EEEEC--CSSCCBCEEEETTTEEECCBSCS
T ss_pred             EEEEe--CCCCCeEEEEECCCEEEEEechH
Confidence            87766  56799999999999999999754

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=2.3e-35  Score=240.36  Aligned_cols=244  Identities=20%  Similarity=0.294  Sum_probs=193.2

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----------cceeEEEeeeccceeEEEEecCCCc-EEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----------HACVRHFYGHGHAINELKFHPQDFN-LLL   73 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~-~l~   73 (291)
                      ....|.+.|++++|+|++.   .+||+++.||.|++|++.+          .+.+..+.+|...|.+++|+| ++. +|+
T Consensus       123 ~~~~h~~~v~~l~~~p~~~---~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~  198 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNA---CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP-NLNGYLL  198 (430)
T ss_dssp             EEEEESSCCSEEEEETTEE---EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT-TSTTEEE
T ss_pred             EEEcCCCcEEEEEECCCCC---cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC-CCCCeEE
Confidence            3567899999999999732   5999999999999999986          577888999999999999999 666 999


Q ss_pred             EeecCCeEEEEECCCcce----eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         74 SVSKDHTLRLWNIKTDIC----IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        74 s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      +|+.||.|++||+..+..    +.....+.+|...|.+++|+| ++.+|++++.||.|++||++++....          
T Consensus       199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~----------  268 (430)
T 2xyi_A          199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK----------  268 (430)
T ss_dssp             EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS----------
T ss_pred             EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc----------
Confidence            999999999999987422    111122268999999999999 67799999999999999999763111          


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                                     .......|...|++++|+  +. ++++|+.||.|++||++....           .+..+..|..
T Consensus       269 ---------------~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-----------~~~~~~~h~~  322 (430)
T 2xyi_A          269 ---------------PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-----------KLHSFESHKD  322 (430)
T ss_dssp             ---------------CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-----------CSEEEECCSS
T ss_pred             ---------------ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-----------CeEEeecCCC
Confidence                           111123588999999998  44 789999999999999987532           2677778888


Q ss_pred             cEEEEEEEecCCC-cEEEEEcCCCcEEEEEcCCCCCCcc--------eeEEEeccccccceeeeEEccCCc-eee
Q psy10348        226 EIWFIRFSMDYWQ-KILAVGNQSGRTYVWDLDVQDPSSI--------KFQILSHPRCMSAVRQTTLSKNGN-VLL  290 (291)
Q Consensus       226 ~i~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~g~-~l~  290 (291)
                      .+..++|+  |++ .+|++++.||.|++||+........        ......+.+|...|++++|+|+++ +|+
T Consensus       323 ~v~~i~~s--p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~  395 (430)
T 2xyi_A          323 EIFQVQWS--PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC  395 (430)
T ss_dssp             CEEEEEEC--SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEE
T ss_pred             CEEEEEEC--CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEE
Confidence            88877665  557 4799999999999999987432110        124445568889999999999999 554

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=6.8e-36  Score=237.59  Aligned_cols=246  Identities=12%  Similarity=0.126  Sum_probs=192.4

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEeeeccceeEEEE------ecCCCcEEEEeec
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFYGHGHAINELKF------HPQDFNLLLSVSK   77 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~l~s~~~   77 (291)
                      ....|...|.+++|+|+. +++.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|      +| ++.+|++++.
T Consensus        60 ~~~~~~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~  137 (357)
T 3i2n_A           60 REIEKAKPIKCGTFGATS-LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSR  137 (357)
T ss_dssp             EEEEESSCEEEEECTTCC-TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEET
T ss_pred             eeecccCcEEEEEEcCCC-CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeC
Confidence            345788999999999983 112599999999999999999988 88999999999999965      67 8899999999


Q ss_pred             CCeEEEEECCCcc-eeeeeccccCC-CCceEEEE----EccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348         78 DHTLRLWNIKTDI-CIAIFGGVEGH-RDEVLSAD----FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS  151 (291)
Q Consensus        78 dg~i~vwd~~~~~-~~~~~~~~~~~-~~~i~~~~----~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~  151 (291)
                      ||.|++||+++++ .+..+....++ ...+.+++    |+|++++|++++.||.|++||+++++....            
T Consensus       138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------------  205 (357)
T 3i2n_A          138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE------------  205 (357)
T ss_dssp             TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE------------
T ss_pred             CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee------------
Confidence            9999999999886 56666321222 33899998    788999999999999999999998775322            


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                       ..|...|.+++|+     ++++++++.|+.|++||+++.+....       .....+..|...
T Consensus       206 -----------------~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~~  261 (357)
T 3i2n_A          206 -----------------TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG-------FASVSEKAHKST  261 (357)
T ss_dssp             -----------------EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE-------EEEEEEECCSSC
T ss_pred             -----------------cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc-------eeeeccCCCcCC
Confidence                             2378889999997     46999999999999999987643200       112234478888


Q ss_pred             EEEEEEEecCCCc-EEEEEcCCCcEEEEEcCCCCCCc-------------ceeEEEeccccccceeeeEEccCCceee
Q psy10348        227 IWFIRFSMDYWQK-ILAVGNQSGRTYVWDLDVQDPSS-------------IKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       227 i~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +..++++  |+++ +|++|+.||.|++||+..+....             .........+|..+|++++|+|+|++|+
T Consensus       262 v~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  337 (357)
T 3i2n_A          262 VWQVRHL--PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC  337 (357)
T ss_dssp             EEEEEEE--TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred             EEEEEEC--CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence            8877766  5588 89999999999999998765331             1123334457889999999999999886

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=7.6e-35  Score=235.54  Aligned_cols=248  Identities=15%  Similarity=0.184  Sum_probs=194.5

Q ss_pred             eeeecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-------------eeccceeEEEEecCCCcE
Q psy10348          6 SLLIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-------------GHGHAINELKFHPQDFNL   71 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~   71 (291)
                      ...|.+.|++++|+| ++    .+|++|+.||.|++||+.+++....+.             +|...|.+++|+|.++.+
T Consensus        39 ~~~h~~~v~~~~~s~~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  114 (408)
T 4a11_B           39 ERIHGGGINTLDIEPVEG----RYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM  114 (408)
T ss_dssp             CCCCSSCEEEEEECTTTC----CEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred             eeccCCcEEEEEEecCCC----CEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence            345899999999999 87    599999999999999999887655543             489999999999977789


Q ss_pred             EEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC---CEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG---TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      |++++.||.|++||+.+++....+    .+...+.++.|++.+   .++++++.|+.|++||+++++....+        
T Consensus       115 l~s~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--------  182 (408)
T 4a11_B          115 FTSSSFDKTLKVWDTNTLQTADVF----NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL--------  182 (408)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEE----ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE--------
T ss_pred             EEEEeCCCeEEEeeCCCCccceec----cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee--------
Confidence            999999999999999999888877    478889999999854   49999999999999999987755443        


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccC----CCceeeeeeec
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTN----ETNVTIINRLN  221 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~  221 (291)
                                          ..|...|.+++|+  ++ ++++++.||.|++||++..........    ...........
T Consensus       183 --------------------~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (408)
T 4a11_B          183 --------------------QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT  242 (408)
T ss_dssp             --------------------CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred             --------------------cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence                                3488999999998  44 689999999999999987653211000    00111122234


Q ss_pred             CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce-------------------------------------
Q psy10348        222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK-------------------------------------  264 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------------------------  264 (291)
                      .+...+..+++  +|++++|++++.||.|++||+.+++.....                                     
T Consensus       243 ~~~~~v~~~~~--~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  320 (408)
T 4a11_B          243 AHNGKVNGLCF--TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT  320 (408)
T ss_dssp             SCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred             cccCceeEEEE--cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence            56677776655  467999999999999999999886532110                                     


Q ss_pred             ----eEEEeccccccceeeeEEccCCceeeC
Q psy10348        265 ----FQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       265 ----~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                          .......+|...|++++|+|++++|++
T Consensus       321 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  351 (408)
T 4a11_B          321 VYSGEQITMLKGHYKTVDCCVFQSNFQELYS  351 (408)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred             CcCCcceeeeccCCCeEEEEEEcCCCCEEEE
Confidence                112233468899999999999999874

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=4.3e-36  Score=241.75  Aligned_cols=252  Identities=12%  Similarity=0.124  Sum_probs=167.0

Q ss_pred             CEEEEecCCCeEEEEccCCcceeE-----EEeeeccceeEEEEec-------CCCcEEEEeecCCeEEEEECCCcceeee
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVR-----HFYGHGHAINELKFHP-------QDFNLLLSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~-----~~~~~~~~v~~~~~~~-------~~~~~l~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                      .++|+++.|++|+|||.++++...     .+.+|.+.|.+++|+|       .++++||+|+.|++|+|||+.++.++..
T Consensus       102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~  181 (393)
T 4gq1_A          102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA  181 (393)
T ss_dssp             EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred             CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence            489999999999999998876543     3468999999999987       3678999999999999999988877776


Q ss_pred             eccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348         95 FGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN  173 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (291)
                      +   ..|..+|.+++|+|++. +|++++.|++|++||+++++..............   ..+..............+|..
T Consensus       182 ~---~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~  255 (393)
T 4gq1_A          182 G---YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP---WLLTLNTLPLVNTCHSSGIAS  255 (393)
T ss_dssp             E---EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC---CSEEEESGGGC------CCSS
T ss_pred             e---cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc---eEEecccccceeeeecccccc
Confidence            6   58899999999999875 7999999999999999988765443321111000   000000000011122346888


Q ss_pred             ceeEEEEc---CCEEEEecCCCeEEEecCCCCCcccccc-CCCce------eeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        174 YVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRT-NETNV------TIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       174 ~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .+.++.|.   +..+++++.|+++++||+.......... .....      ............ ....+.+.+++.++++
T Consensus       256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s  334 (393)
T 4gq1_A          256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL-LGACPHPRYMDYFATA  334 (393)
T ss_dssp             SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCS-SCCEECSSCTTEEEEE
T ss_pred             cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc-eeEEEccCCCCEEEEE
Confidence            99999996   7799999999999999997764421110 00000      001111111111 1123444445678888


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+.||.|++||+.+++...   ...   +|..+|++++|||||++||+
T Consensus       335 gs~Dg~V~lwd~~~~~~~~---~~~---~~~~~V~svafspdG~~LA~  376 (393)
T 4gq1_A          335 HSQHGLIQLINTYEKDSNS---IPI---QLGMPIVDFCWHQDGSHLAI  376 (393)
T ss_dssp             ETTTTEEEEEETTCTTCCE---EEE---ECSSCEEEEEECTTSSEEEE
T ss_pred             ECCCCEEEEEECCCCcEEE---Eec---CCCCcEEEEEEcCCCCEEEE
Confidence            9999999999999886432   222   46679999999999999984

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2e-35  Score=240.09  Aligned_cols=251  Identities=15%  Similarity=0.212  Sum_probs=188.7

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ..+....|+|++    .+|++|+.||.|++||+++++....+.+|...|.+++|+| ++.+|++|+.|+.|++||+.+++
T Consensus        98 ~~~~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~  172 (420)
T 3vl1_A           98 DYTAVDTAKLQM----RRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGS  172 (420)
T ss_dssp             CEEEEEEECSSS----CEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCC
T ss_pred             CceEEEEEecCC----CEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCc
Confidence            445555778888    5999999999999999999998888889999999999999 88999999999999999999999


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      .+..+   .+|...|.+++|+|++++|++++.|+.|++||+++++....+..............+..  ..  .......
T Consensus       173 ~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~--~~~~~~~  245 (420)
T 3vl1_A          173 NPRTL---IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFV--GT--DRQLHEI  245 (420)
T ss_dssp             CCEEE---ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEE--CC--CSSCGGG
T ss_pred             CceEE---cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEec--CC--cceeeec
Confidence            88888   78999999999999999999999999999999999887665542111000000000000  00  0001122


Q ss_pred             cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEEcCC
Q psy10348        171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVGNQS  247 (291)
Q Consensus       171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~~d  247 (291)
                      +...+.+++|+  +++|++++.||.|++||+++.+..           ......+...+..++++  |++. +|++|+.|
T Consensus       246 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~~v~~~~~~--~~~~~~l~~g~~d  312 (420)
T 3vl1_A          246 STSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT-----------IQLPSKFTCSCNSLTVD--GNNANYIYAGYEN  312 (420)
T ss_dssp             CCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE-----------EEECCTTSSCEEEEEEC--SSCTTEEEEEETT
T ss_pred             ccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee-----------EEcccccCCCceeEEEe--CCCCCEEEEEeCC
Confidence            45667777777  679999999999999999887542           22333466677766654  6688 99999999


Q ss_pred             CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |.|++||+.+++..   ...+.. .|...|.++.| +++++|++
T Consensus       313 g~i~vwd~~~~~~~---~~~~~~-~~~~~v~~~~~-~~~~~l~s  351 (420)
T 3vl1_A          313 GMLAQWDLRSPECP---VGEFLI-NEGTPINNVYF-AAGALFVS  351 (420)
T ss_dssp             SEEEEEETTCTTSC---SEEEEE-STTSCEEEEEE-ETTEEEEE
T ss_pred             CeEEEEEcCCCcCc---hhhhhc-cCCCCceEEEe-CCCCEEEE
Confidence            99999999987532   123321 35678888855 57777764

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-35  Score=257.56  Aligned_cols=241  Identities=17%  Similarity=0.206  Sum_probs=197.0

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL   81 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i   81 (291)
                      ...|.+.|++++|+|++    ++|++|+.||.|+|||+.  +++.+..+.+|.++|.+++|+| +  +.+|++|+.||.|
T Consensus         5 l~gH~~~V~~l~~s~dg----~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I   79 (753)
T 3jro_A            5 ANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKV   79 (753)
T ss_dssp             ---CCCCEEEECCCSSS----CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCE
T ss_pred             cccCcceeEEEEECCCC----CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeE
Confidence            34689999999999998    499999999999999997  5677888999999999999998 5  8999999999999


Q ss_pred             EEEECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         82 RLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        82 ~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      ++||+.+++  .+..+   .+|...|.+++|+|+  ++.+++|+.||.|++||++++......                 
T Consensus        80 ~vwd~~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-----------------  139 (753)
T 3jro_A           80 LIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-----------------  139 (753)
T ss_dssp             EEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-----------------
T ss_pred             EEEECCCCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-----------------
Confidence            999999876  45555   789999999999999  999999999999999999887432211                 


Q ss_pred             ccccCcccccccccCcceeEEEEcC---------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWLG---------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF  222 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  222 (291)
                               ....|...|.++.|++               +++++|+.||.|++||++.....        ......+..
T Consensus       140 ---------~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~--------~~~~~~~~~  202 (753)
T 3jro_A          140 ---------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------YVLESTLEG  202 (753)
T ss_dssp             ---------EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE--------EEEEEEECC
T ss_pred             ---------EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc--------ceeeeeecC
Confidence                     1234888999999973               58999999999999999876321        133567778


Q ss_pred             CcccEEEEEEEecCC---CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        223 KDCEIWFIRFSMDYW---QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       223 ~~~~i~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |...|..+++  +|+   +.+|++|+.||.|++||+.+++... .........|...|++++|+|+|++|++
T Consensus       203 h~~~V~~l~~--sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~~~~~~~~~v~~l~~spdg~~l~s  271 (753)
T 3jro_A          203 HSDWVRDVAW--SPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNVLAL  271 (753)
T ss_dssp             CSSCEEEEEE--CCCCSSSEEEEEEESSSCEEEEEESSSSSCC-BCCBSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred             CCCcEEEEEe--ccCCCCCCEEEEEecCCEEEEecCCCCCCcc-eeEEeccCCCCCceEEEEEcCCCCEEEE
Confidence            8888877655  477   8999999999999999999874321 1122333467889999999999998874

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-34  Score=234.76  Aligned_cols=235  Identities=17%  Similarity=0.242  Sum_probs=186.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      |.+.|++++|+|++    .+|++++.||.|++|| .+++.+..+..|...|.+++|+| ++.+|++++.||.|++||+.+
T Consensus       107 ~~~~v~~~~~s~~~----~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~  180 (425)
T 1r5m_A          107 TTNQVTCLAWSHDG----NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVIS  180 (425)
T ss_dssp             -CBCEEEEEECTTS----SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTT
T ss_pred             CCCceEEEEEcCCC----CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCC
Confidence            56799999999998    5999999999999999 67888899999999999999999 889999999999999999987


Q ss_pred             cceeeeec-----------------------------------------------------cccCCCCceEEEEEccCCC
Q psy10348         89 DICIAIFG-----------------------------------------------------GVEGHRDEVLSADFDLLGT  115 (291)
Q Consensus        89 ~~~~~~~~-----------------------------------------------------~~~~~~~~i~~~~~~~~~~  115 (291)
                      ++.+..+.                                                     .+..|...|.+++|+|+++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  260 (425)
T 1r5m_A          181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK  260 (425)
T ss_dssp             TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT
T ss_pred             CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC
Confidence            76554331                                                     1235667788888888888


Q ss_pred             EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeE
Q psy10348        116 KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCI  194 (291)
Q Consensus       116 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i  194 (291)
                      +|++++.|+.|++||+++++....+                            ..|...|.+++|+ ..++++++.|+.|
T Consensus       261 ~l~~~~~d~~i~i~d~~~~~~~~~~----------------------------~~~~~~i~~~~~~~~~~l~~~~~d~~i  312 (425)
T 1r5m_A          261 LLLSASDDGTLRIWHGGNGNSQNCF----------------------------YGHSQSIVSASWVGDDKVISCSMDGSV  312 (425)
T ss_dssp             EEEEEETTSCEEEECSSSBSCSEEE----------------------------CCCSSCEEEEEEETTTEEEEEETTSEE
T ss_pred             EEEEEcCCCEEEEEECCCCccceEe----------------------------cCCCccEEEEEECCCCEEEEEeCCCcE
Confidence            8888888888888887776544333                            3488899999998 3399999999999


Q ss_pred             EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce----------
Q psy10348        195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK----------  264 (291)
Q Consensus       195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~----------  264 (291)
                      ++||+++.+            .+..+..+...+..+++  +|++++|++++.||.|++||+.+++.....          
T Consensus       313 ~i~d~~~~~------------~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~  378 (425)
T 1r5m_A          313 RLWSLKQNT------------LLALSIVDGVPIFAGRI--SQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN  378 (425)
T ss_dssp             EEEETTTTE------------EEEEEECTTCCEEEEEE--CTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred             EEEECCCCc------------EeEecccCCccEEEEEE--cCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence            999998874            36777777777776655  466999999999999999999876410000          


Q ss_pred             ----eEEEecccccc--ceeeeEEccCCceeeC
Q psy10348        265 ----FQILSHPRCMS--AVRQTTLSKNGNVLLC  291 (291)
Q Consensus       265 ----~~~~~~~~~~~--~v~~~~~s~~g~~l~s  291 (291)
                          ........|..  .|++++|+|++++|++
T Consensus       379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  411 (425)
T 1r5m_A          379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKISV  411 (425)
T ss_dssp             CEECCEEEEECCTTCCCCEEEEEECTTSSEEEE
T ss_pred             cccchhhhhhcCcccCCceEEEEccCCCceEEE
Confidence                02223345655  9999999999999874

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=6e-34  Score=234.33  Aligned_cols=245  Identities=21%  Similarity=0.292  Sum_probs=193.1

Q ss_pred             eecce-eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEEN-FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~-i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|.+. +.++.+  ++    .+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++ +|++|+.||+|++||+
T Consensus       119 ~h~~~v~~~~~~--~~----~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~  190 (464)
T 3v7d_B          119 GHMTSVITCLQF--ED----NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDI  190 (464)
T ss_dssp             CCSSSCEEEEEE--ET----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEET
T ss_pred             CCCCCcEEEEEE--CC----CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEEC
Confidence            45555 455555  44    4999999999999999999999999999999999999998 65 9999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEc--cCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFD--LLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++++.+..+   .+|...|.+++|+  +++.++++++.||.|++||++++...........     ..............
T Consensus       191 ~~~~~~~~~---~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  262 (464)
T 3v7d_B          191 KKGCCTHVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHD-----YPLVFHTPEENPYF  262 (464)
T ss_dssp             TTTEEEEEE---CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CC-----SSEEESCGGGCTTE
T ss_pred             CCCcEEEEE---CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCC-----cceEeeccCCCeEE
Confidence            999988888   7899999999998  5778999999999999999998765433221100     00000011111112


Q ss_pred             cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                      .....+|...+.++..+++++++++.|+.|++||+++.+            .+..+.+|...+..+++.  |++++|++|
T Consensus       263 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~------------~~~~~~~~~~~v~~~~~~--~~~~~l~sg  328 (464)
T 3v7d_B          263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK------------CLYILSGHTDRIYSTIYD--HERKRCISA  328 (464)
T ss_dssp             EEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCEEEEEEE--TTTTEEEEE
T ss_pred             EEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc------------EEEEecCCCCCEEEEEEc--CCCCEEEEE
Confidence            344567999999998889999999999999999998873            477888888888877766  559999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.||.|++||+.+++.      .....+|...|.+++|++  ++|+
T Consensus       329 ~~dg~i~vwd~~~~~~------~~~~~~h~~~v~~~~~~~--~~l~  366 (464)
T 3v7d_B          329 SMDTTIRIWDLENGEL------MYTLQGHTALVGLLRLSD--KFLV  366 (464)
T ss_dssp             ETTSCEEEEETTTTEE------EEEECCCSSCEEEEEECS--SEEE
T ss_pred             eCCCcEEEEECCCCcE------EEEEeCCCCcEEEEEEcC--CEEE
Confidence            9999999999998742      223347889999999984  5554

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2.8e-35  Score=237.53  Aligned_cols=234  Identities=14%  Similarity=0.162  Sum_probs=186.6

Q ss_pred             eecceeEEEEeeeccCCCC---CEEEEecCCCeEEEEccCCcce-----eEEEeee-----ccceeEEEEe----cCCCc
Q psy10348          8 LIEENFYTCAWSMDLESGR---PLLAVAGSRAVIRIFSPAFHAC-----VRHFYGH-----GHAINELKFH----PQDFN   70 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~---~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~   70 (291)
                      .|...|++++|+|+.+.++   .+|++++.||.|++|++.+++.     +..+..|     ...|.+++|+    | ++.
T Consensus        60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~  138 (397)
T 1sq9_A           60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLS  138 (397)
T ss_dssp             CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----C
T ss_pred             cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCc
Confidence            5789999999999922222   3999999999999999998887     8888888     5999999999    9 888


Q ss_pred             E-EEEeecCCeEEEEECCC------cceee-----eecc----ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348         71 L-LLSVSKDHTLRLWNIKT------DICIA-----IFGG----VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        71 ~-l~s~~~dg~i~vwd~~~------~~~~~-----~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~  134 (291)
                      + |++++.||.|++||+.+      ++.+.     .+..    ...|...|.+++|+|++ +|++++.||.|++||++++
T Consensus       139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~  217 (397)
T 1sq9_A          139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL  217 (397)
T ss_dssp             EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT
T ss_pred             eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC
Confidence            8 99999999999999998      66555     4410    02488999999999999 9999999999999999987


Q ss_pred             hhhhhhccccccCCCCccccccCccccCccccccccc---CcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccc
Q psy10348        135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH---RNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKE  206 (291)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~  206 (291)
                      +.+..+..                         ...|   ...|.+++|+  +++|++++.|   +.|++||+++.+.  
T Consensus       218 ~~~~~~~~-------------------------~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~--  270 (397)
T 1sq9_A          218 RPLYNFES-------------------------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER--  270 (397)
T ss_dssp             EEEEEEEC-------------------------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE--
T ss_pred             ceeEEEec-------------------------cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc--
Confidence            75544321                         0116   8889999998  7899999999   9999999988744  


Q ss_pred             cccCCCceeeeeeecC-------------CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec---
Q psy10348        207 LRTNETNVTIINRLNF-------------KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH---  270 (291)
Q Consensus       207 ~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---  270 (291)
                                +..+..             |...+..++++  |++++|++++.||.|++||+.+++.+    ..+..   
T Consensus       271 ----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~  334 (397)
T 1sq9_A          271 ----------IGSLSVPTHSSQASLGEFAHSSWVMSLSFN--DSGETLCSAGWDGKLRFWDVKTKERI----TTLNMHCD  334 (397)
T ss_dssp             ----------EEEECBC--------CCBSBSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTTTEEE----EEEECCGG
T ss_pred             ----------cceeccCcccccccccccccCCcEEEEEEC--CCCCEEEEEeCCCeEEEEEcCCCcee----EEEecccC
Confidence                      566666             77777766555  66999999999999999999987532    33331   


Q ss_pred             -ccc---------------ccceeeeEEccCC
Q psy10348        271 -PRC---------------MSAVRQTTLSKNG  286 (291)
Q Consensus       271 -~~~---------------~~~v~~~~~s~~g  286 (291)
                       ..|               ..+|++++|+|+|
T Consensus       335 ~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g  366 (397)
T 1sq9_A          335 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG  366 (397)
T ss_dssp             GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred             cccchhhhhccccccccccCCceeEEEecccc
Confidence             044               8899999999998

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=5.4e-35  Score=232.38  Aligned_cols=240  Identities=14%  Similarity=0.137  Sum_probs=185.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEE-eeeccceeEEEEecCC--CcEEEEeecCCe
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQD--FNLLLSVSKDHT   80 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~l~s~~~dg~   80 (291)
                      ..|.+.|++++|+|++.   .++++|+.   ||.|++||+.+++..... .+|..+|.+++|+|+.  +.+|++|+.||.
T Consensus        15 ~~h~~~v~~~~~~p~~~---~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~   91 (357)
T 3i2n_A           15 KGFNYTVFDCKWVPCSA---KFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN   91 (357)
T ss_dssp             EECSSCEEEEEECTTSS---EEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred             cCCCCceEEEEEcCCCc---eEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence            34889999999999885   46667766   999999999988765443 3799999999999932  799999999999


Q ss_pred             EEEEECCCcc-eeeeeccccCCCCceEEEEE------ccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCcc
Q psy10348         81 LRLWNIKTDI-CIAIFGGVEGHRDEVLSADF------DLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARST  152 (291)
Q Consensus        81 i~vwd~~~~~-~~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~  152 (291)
                      |++||+.+++ .+..+   .+|...|.+++|      +|++++|++++.||.|++||+++++ ....+...         
T Consensus        92 i~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~---------  159 (357)
T 3i2n_A           92 LHIWNLEAPEMPVYSV---KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV---------  159 (357)
T ss_dssp             EEEECTTSCSSCSEEE---CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC---------
T ss_pred             EEEEeCCCCCccEEEE---EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc---------
Confidence            9999999887 77777   789999999955      6789999999999999999999876 33222110         


Q ss_pred             ccccCccccCcccccccccCcceeEEEE----c--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRNYVDCVRW----L--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                     ...+...+.+++|    +  ++++++++.|+.|++||+++.+.            . ....+...
T Consensus       160 ---------------~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~-~~~~~~~~  211 (357)
T 3i2n_A          160 ---------------QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL------------R-WETNIKNG  211 (357)
T ss_dssp             ---------------TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE------------E-EEEECSSC
T ss_pred             ---------------CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce------------e-eecCCCCc
Confidence                           0012347888884    3  78999999999999999988643            2 22345566


Q ss_pred             EEEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348        227 IWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL  290 (291)
Q Consensus       227 i~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~  290 (291)
                      +..+++++.. ++.+|++|+.||.|++||+.+++..... ......+|...|++++|+|+++ +|+
T Consensus       212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~  276 (357)
T 3i2n_A          212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF-ASVSEKAHKSTVWQVRHLPQNRELFL  276 (357)
T ss_dssp             EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE-EEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred             eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce-eeeccCCCcCCEEEEEECCCCCcEEE
Confidence            6665554310 6999999999999999999987655332 2223347889999999999998 565

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.9e-35  Score=241.01  Aligned_cols=239  Identities=15%  Similarity=0.187  Sum_probs=180.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----------eeEEEeeec------------cceeEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----------CVRHFYGHG------------HAINELK   63 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----------~~~~~~~~~------------~~v~~~~   63 (291)
                      +.+.+.|++++|+|++    .+||+|+.||.|+|||+.+++           ....+.+|.            +.|.+++
T Consensus        25 ~~~~~~V~~v~~s~~g----~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~  100 (447)
T 3dw8_B           25 VAEADIISTVEFNHSG----ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR  100 (447)
T ss_dssp             CCGGGSEEEEEECSSS----SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred             ccccCcEEEEEECCCC----CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence            4568999999999998    499999999999999998876           577888998            8899999


Q ss_pred             EecCCC--cEEEEeecCCeEEEEECCCcceee---------------------------------------eeccccCCC
Q psy10348         64 FHPQDF--NLLLSVSKDHTLRLWNIKTDICIA---------------------------------------IFGGVEGHR  102 (291)
Q Consensus        64 ~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~---------------------------------------~~~~~~~~~  102 (291)
                      |+| ++  .+|++++.|+.|++||+.++....                                       .+  ..+|.
T Consensus       101 ~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~  177 (447)
T 3dw8_B          101 WLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF--ANAHT  177 (447)
T ss_dssp             ECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE--CSCCS
T ss_pred             EcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe--ccCCC
Confidence            999 66  799999999999999997654321                                       11  25799


Q ss_pred             CceEEEEEccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc
Q psy10348        103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL  181 (291)
Q Consensus       103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  181 (291)
                      ..|.+++|+|++++|++| .|+.|++||+++.. ....+..    .                 ......|...|.+++|+
T Consensus       178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~----~-----------------~~~~~~~~~~v~~~~~~  235 (447)
T 3dw8_B          178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDI----K-----------------PANMEELTEVITAAEFH  235 (447)
T ss_dssp             SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC----C-----------------CSSGGGCCCCEEEEEEC
T ss_pred             cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeec----c-----------------cccccccCcceEEEEEC
Confidence            999999999999999998 79999999998433 2221100    0                 01224588999999998


Q ss_pred             --C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc------------cEEEEEEEecCCCcEEEEEcC
Q psy10348        182 --G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC------------EIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       182 --~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~~~~~~~~~~~~l~~~~~  246 (291)
                        + ++|++++.|+.|++||+++.....        ..+..+..+..            .+..+++  +|++++|++++.
T Consensus       236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~  305 (447)
T 3dw8_B          236 PNSCNTFVYSSSKGTIRLCDMRASALCD--------RHSKLFEEPEDPSNRSFFSEIISSISDVKF--SHSGRYMMTRDY  305 (447)
T ss_dssp             SSCTTEEEEEETTSCEEEEETTTCSSSC--------TTCEEECCC-----CCHHHHHTTCEEEEEE--CTTSSEEEEEES
T ss_pred             CCCCcEEEEEeCCCeEEEEECcCCcccc--------ceeeEeccCCCccccccccccCceEEEEEE--CCCCCEEEEeeC
Confidence              4 799999999999999998875310        01344444443            6666555  567999999999


Q ss_pred             CCcEEEEEcCC-CCCCcceeEEEecccccc---------------ceeeeEEccCCceeeC
Q psy10348        247 SGRTYVWDLDV-QDPSSIKFQILSHPRCMS---------------AVRQTTLSKNGNVLLC  291 (291)
Q Consensus       247 dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~---------------~v~~~~~s~~g~~l~s  291 (291)
                       |.|++||+.+ ++++.    .+.  .|..               .+.+++|+|+|++|++
T Consensus       306 -~~v~iwd~~~~~~~~~----~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s  359 (447)
T 3dw8_B          306 -LSVKVWDLNMENRPVE----TYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMT  359 (447)
T ss_dssp             -SEEEEEETTCCSSCSC----CEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEE
T ss_pred             -CeEEEEeCCCCccccc----eee--ccccccccccccccccccccceEEEECCCCCEEEE
Confidence             9999999987 54432    222  2322               1334999999999874

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=5.3e-34  Score=223.21  Aligned_cols=227  Identities=18%  Similarity=0.232  Sum_probs=172.8

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      .++++||+++     +||+|. |++|+|||++++++++.++  +|...|++++|+| ++++|++|+.||+|++||+++++
T Consensus        28 ~~~l~WS~~~-----~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~  100 (318)
T 4ggc_A           28 LNLVDWSSGN-----VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQK  100 (318)
T ss_dssp             CBCEEECTTS-----EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTE
T ss_pred             ceEEEECCCC-----EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCce
Confidence            4679999875     888775 8999999999999888775  5778899999999 99999999999999999999887


Q ss_pred             eeeeec--------------------------------------cccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348         91 CIAIFG--------------------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT  132 (291)
Q Consensus        91 ~~~~~~--------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~  132 (291)
                      .+..+.                                      .+.+|...+..+.+++++++|++++.|+.|++||++
T Consensus       101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~  180 (318)
T 4ggc_A          101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA  180 (318)
T ss_dssp             EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred             eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence            655441                                      124567777888888888888888888888888888


Q ss_pred             CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CC--EEEEecCCCeEEEecCCCCCcccc
Q psy10348        133 KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GD--FVLSKSCENCIICWKPGRLEDKEL  207 (291)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~l~~~~~d~~i~iwd~~~~~~~~~  207 (291)
                      +++.....                        ......+...|.++.+.   ++  .+++++.+++|++||......   
T Consensus       181 ~~~~~~~~------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---  233 (318)
T 4ggc_A          181 PGEGGWVP------------------------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---  233 (318)
T ss_dssp             CBTTBSCC------------------------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---
T ss_pred             CCcccccc------------------------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---
Confidence            76643221                        11223467788899887   33  345778899999999987643   


Q ss_pred             ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE--cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG--NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                               ... ..+...+..+.+.  |++..++++  +.||.|++||+.++++    ...  ..+|.+.|++++|+||
T Consensus       234 ---------~~~-~~~~~~v~~~~~~--~~~~~~~~~sg~~d~~i~iwd~~~~~~----~~~--l~gH~~~V~~l~~spd  295 (318)
T 4ggc_A          234 ---------LSA-VDAHSQVCSILWS--PHYKELISGHGFAQNQLVIWKYPTMAK----VAE--LKGHTSRVLSLTMSPD  295 (318)
T ss_dssp             ---------EEE-EECSSCEEEEEEE--TTTTEEEEEECTTTCCEEEEETTTCCE----EEE--ECCCSSCEEEEEECTT
T ss_pred             ---------ccc-ccceeeeeeeeec--ccccceEEEEEcCCCEEEEEECCCCcE----EEE--EcCCCCCEEEEEEcCC
Confidence                     222 2344456666555  447766654  4899999999998853    233  3479999999999999


Q ss_pred             CceeeC
Q psy10348        286 GNVLLC  291 (291)
Q Consensus       286 g~~l~s  291 (291)
                      |++||+
T Consensus       296 g~~l~S  301 (318)
T 4ggc_A          296 GATVAS  301 (318)
T ss_dssp             SSCEEE
T ss_pred             CCEEEE
Confidence            999985

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-35  Score=238.75  Aligned_cols=236  Identities=12%  Similarity=0.195  Sum_probs=190.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc------eeEE---EeeeccceeEEEEecCCCcEEEEeecC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA------CVRH---FYGHGHAINELKFHPQDFNLLLSVSKD   78 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~------~~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~d   78 (291)
                      .|...|++++|+|++.   .+|++++.||.|++||+.+++      ....   +..|...|.+++|+|+++.+|++++.|
T Consensus       111 ~h~~~v~~~~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  187 (416)
T 2pm9_A          111 NHSSSVKTVKFNAKQD---NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS  187 (416)
T ss_dssp             CSSSCCCEEEECSSST---TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS
T ss_pred             CCccceEEEEEcCCCC---CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC
Confidence            4789999999999832   599999999999999999876      3332   367899999999999438999999999


Q ss_pred             CeEEEEECCCcceeeeeccccCC------CCceEEEEEccCC-CEEEEEecCC---cEEEEeccCch-hhhhhccccccC
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGH------RDEVLSADFDLLG-TKIMSCGMDH---SLKLWDLTKPE-IKDACAESYTFN  147 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~d~---~i~v~d~~~~~-~~~~~~~~~~~~  147 (291)
                      |.|++||+++++.+..+   ..+      ...|.+++|+|++ .++++++.|+   .|++||++++. ....        
T Consensus       188 g~v~iwd~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~--------  256 (416)
T 2pm9_A          188 NFASIWDLKAKKEVIHL---SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT--------  256 (416)
T ss_dssp             SCEEEEETTTTEEEEEE---CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC--------
T ss_pred             CCEEEEECCCCCcceEE---eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE--------
Confidence            99999999999888877   344      7899999999997 5899999998   99999998863 2221        


Q ss_pred             CCCccccccCccccCccccccc-ccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRD-IHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                                          .. +|...|.+++|+   +++|++++.|+.|++||+++.+.            +..+..|
T Consensus       257 --------------------~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~------------~~~~~~~  304 (416)
T 2pm9_A          257 --------------------LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ------------LSQFPAR  304 (416)
T ss_dssp             --------------------CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE------------EEEEECS
T ss_pred             --------------------eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc------------ceeecCC
Confidence                                12 488999999996   57999999999999999988744            7778888


Q ss_pred             cccEEEEEEEecCCC-cEEEEEcCCCcEEEEEcCCCCCCcceeE-----------EEec------------------ccc
Q psy10348        224 DCEIWFIRFSMDYWQ-KILAVGNQSGRTYVWDLDVQDPSSIKFQ-----------ILSH------------------PRC  273 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~------------------~~~  273 (291)
                      ...+..++|+  |++ .+|++++.||.|++||+.+.........           .+..                  ..|
T Consensus       305 ~~~v~~~~~s--~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (416)
T 2pm9_A          305 GNWCFKTKFA--PEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWY  382 (416)
T ss_dssp             SSCCCCEEEC--TTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTT
T ss_pred             CCceEEEEEC--CCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccc
Confidence            8888776655  668 8999999999999999998764322110           0111                  115


Q ss_pred             ccceeeeEEccCCceeeC
Q psy10348        274 MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~s  291 (291)
                      ..++.+++|+|||++|++
T Consensus       383 ~~~~~~~~~s~dg~~la~  400 (416)
T 2pm9_A          383 GEPSPAAHWAFGGKLVQI  400 (416)
T ss_dssp             CCCSCCCEEETTTEEECB
T ss_pred             cCCccceEEeeCCeEEEE
Confidence            678889999999999974

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.5e-33  Score=229.07  Aligned_cols=229  Identities=18%  Similarity=0.280  Sum_probs=185.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    .+||+|+.||.|+|||+++++.+..+.+|...+.++.+++   .+|++|+.|+.+++||..
T Consensus       145 ~~~~~V~sv~fspdg----~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~  217 (420)
T 4gga_A          145 QPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVR  217 (420)
T ss_dssp             STTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETT
T ss_pred             CCCCcEEEEEECCCC----CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeec
Confidence            356789999999998    4999999999999999999999999999999999988765   799999999999999988


Q ss_pred             Ccc-eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         88 TDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        88 ~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ... .+..+   .+|...+..+.|+|++.++++++.|+.+++||..+++....                        ...
T Consensus       218 ~~~~~~~~~---~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~------------------------~~~  270 (420)
T 4gga_A          218 VAEHHVATL---SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV------------------------PLQ  270 (420)
T ss_dssp             SSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC------------------------CSE
T ss_pred             ccceeeEEe---cccccceeeeeecCCCCeeeeeeccccceEEeeccccccce------------------------eee
Confidence            654 44455   78999999999999999999999999999999987763211                        112


Q ss_pred             cccccCcceeEEEEc---CCEEEE--ecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        167 TRDIHRNYVDCVRWL---GDFVLS--KSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~---~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                      ....|...|.+++|+   ++++++  |+.|++|++||+.++..            +..+..+. .+..+.+  +|+++.+
T Consensus       271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~------------~~~~~~~~-~v~~~~~--~~~~~~l  335 (420)
T 4gga_A          271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC------------LSAVDAHS-QVCSILW--SPHYKEL  335 (420)
T ss_dssp             EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE------------EEEEECSS-CEEEEEE--ETTTTEE
T ss_pred             eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc------------ceeecccc-ceeeeee--cCCCCeE
Confidence            224588899999998   445554  56799999999998744            55555444 3444444  4668888


Q ss_pred             EEEc--CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        242 AVGN--QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       242 ~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++  .||.|+|||+.++++      .....+|.+.|++++|+|||++|++
T Consensus       336 v~~sg~~d~~I~iwd~~~~~~------v~~l~gH~~~V~~l~~spdg~~l~S  381 (420)
T 4gga_A          336 ISGHGFAQNQLVIWKYPTMAK------VAELKGHTSRVLSLTMSPDGATVAS  381 (420)
T ss_dssp             EEEECTTTCCEEEEETTTCCE------EEEECCCSSCEEEEEECTTSSCEEE
T ss_pred             EEEEecCCCEEEEEECCCCcE------EEEEcCCCCCEEEEEEcCCCCEEEE
Confidence            7654  799999999998853      2233489999999999999999985

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=6.5e-35  Score=238.89  Aligned_cols=248  Identities=12%  Similarity=0.193  Sum_probs=179.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee---------------------------------------EE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV---------------------------------------RH   51 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~---------------------------------------~~   51 (291)
                      +.|++++|+|+++  ..+|++++.||.|++||+.+++..                                       ..
T Consensus        94 ~~V~~l~~~~~~~--~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (447)
T 3dw8_B           94 EKINKIRWLPQKN--AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI  171 (447)
T ss_dssp             CCCCEEEECCCCS--SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred             CceEEEEEcCCCC--cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence            7899999999862  128999999999999998764432                                       12


Q ss_pred             -EeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-cceeeee----ccccCCCCceEEEEEccCC-CEEEEEecCC
Q psy10348         52 -FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-DICIAIF----GGVEGHRDEVLSADFDLLG-TKIMSCGMDH  124 (291)
Q Consensus        52 -~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~----~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~  124 (291)
                       ..+|...|.+++|+| ++++|++| .|+.|++||+++ ++....+    ..+.+|...|.+++|+|++ .+|++|+.||
T Consensus       172 ~~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  249 (447)
T 3dw8_B          172 FANAHTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG  249 (447)
T ss_dssp             ECSCCSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred             eccCCCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence             257999999999999 89999998 799999999984 3343321    0236899999999999998 8999999999


Q ss_pred             cEEEEeccCchhh----hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEec
Q psy10348        125 SLKLWDLTKPEIK----DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWK  198 (291)
Q Consensus       125 ~i~v~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd  198 (291)
                      .|++||+++++..    ..+....    .            .........|...|.+++|+  +++|++++. +.|++||
T Consensus       250 ~i~iwd~~~~~~~~~~~~~~~~~~----~------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd  312 (447)
T 3dw8_B          250 TIRLCDMRASALCDRHSKLFEEPE----D------------PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD  312 (447)
T ss_dssp             CEEEEETTTCSSSCTTCEEECCC---------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred             eEEEEECcCCccccceeeEeccCC----C------------ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence            9999999988752    2221100    0            00001112345589999998  779999998 9999999


Q ss_pred             CCC-CCccccccCCCceeeeeeecCCcccEE-------------EEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce
Q psy10348        199 PGR-LEDKELRTNETNVTIINRLNFKDCEIW-------------FIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK  264 (291)
Q Consensus       199 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~-------------~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~  264 (291)
                      ++. .+.            +..+..|...+.             ...++++|++++|++|+.||.|++||+.+++.+...
T Consensus       313 ~~~~~~~------------~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~  380 (447)
T 3dw8_B          313 LNMENRP------------VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE  380 (447)
T ss_dssp             TTCCSSC------------SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred             CCCCccc------------cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence            986 433            444554432111             112566788999999999999999999987532100


Q ss_pred             e--------------------------EEEeccccccceeeeEEccCCceeeC
Q psy10348        265 F--------------------------QILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       265 ~--------------------------~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .                          .......+...|.+++|+|+|++||+
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~  433 (447)
T 3dw8_B          381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAV  433 (447)
T ss_dssp             CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEE
T ss_pred             ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEE
Confidence            0                          00001134567899999999999874

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=2.4e-34  Score=262.14  Aligned_cols=240  Identities=17%  Similarity=0.299  Sum_probs=198.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|++++|+|++    +++++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++++|++++.||.|++||+.
T Consensus       613 ~h~~~v~~~~~s~~~----~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~  687 (1249)
T 3sfz_A          613 PHTDAVYHACFSQDG----QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSA  687 (1249)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             cccccEEEEEECCCC----CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECC
Confidence            588999999999998    5999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +++.+..+   .+|...|.+++|+|  ++.++++++.|+.|++||+++++....+                         
T Consensus       688 ~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-------------------------  739 (1249)
T 3sfz_A          688 TGKLVHTY---DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-------------------------  739 (1249)
T ss_dssp             TCCEEEEE---ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-------------------------
T ss_pred             CCceEEEE---cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-------------------------
Confidence            99999888   78999999999999  4568999999999999999988765443                         


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC------------------------C--------
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN------------------------E--------  211 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------------------------~--------  211 (291)
                         .+|...|.+++|+  ++++++++.||.|++||+.+.........                        .        
T Consensus       740 ---~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~  816 (1249)
T 3sfz_A          740 ---FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA  816 (1249)
T ss_dssp             ---CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred             ---cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence               3489999999998  77999999999999999876643211000                        0        


Q ss_pred             ----------Cceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeee
Q psy10348        212 ----------TNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQT  280 (291)
Q Consensus       212 ----------~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~  280 (291)
                                .....+..+ ..+...+..+++  +|++.++++++.||.|++||+.++.      ......+|.+.|.++
T Consensus       817 ~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~~dg~v~vwd~~~~~------~~~~~~~h~~~v~~v  888 (1249)
T 3sfz_A          817 AKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF--SPYDHLAVIALSQYCVELWNIDSRL------KVADCRGHLSWVHGV  888 (1249)
T ss_dssp             ETTEEEEEETTTCCEEEEEECSSSSCCCEEEE--CSSTTEEEEECSSSCEEEEETTTTE------EEEEECCCSSCEEEE
T ss_pred             cCCcEEEEEecCCCceeEEcCCCCCceEEEEE--cCCCCEEEEEeCCCeEEEEEcCCCc------eeeecCCCccceEEE
Confidence                      000111111 245555655554  5679999999999999999999874      233345788999999


Q ss_pred             EEccCCceeeC
Q psy10348        281 TLSKNGNVLLC  291 (291)
Q Consensus       281 ~~s~~g~~l~s  291 (291)
                      +|+|+|++|++
T Consensus       889 ~~spdg~~l~s  899 (1249)
T 3sfz_A          889 MFSPDGSSFLT  899 (1249)
T ss_dssp             EECTTSSEEEE
T ss_pred             EECCCCCEEEE
Confidence            99999998874

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-34  Score=235.53  Aligned_cols=235  Identities=12%  Similarity=0.153  Sum_probs=183.0

Q ss_pred             eecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCC---cc---eeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAF---HA---CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .|.+.|++++|+| ++    .+|++|+.||+|+|||+.+   +.   ....+ .|...|.+++|+| ++.+|++|+.||.
T Consensus        61 ~h~~~V~~~~~s~~~~----~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s~dg~  134 (437)
T 3gre_A           61 NEPNSITSSAVSPGET----PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP-NFDAFAVSSKDGQ  134 (437)
T ss_dssp             TTTSCEEEEEEECSSS----CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred             CCCCceEEEEECCCCC----CEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC-CCCEEEEEeCCCE
Confidence            4679999999999 87    5999999999999999876   33   23333 5999999999999 8999999999999


Q ss_pred             EEEEECC---Ccceeeeec-----c--ccC--CCCceEEEE--EccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348         81 LRLWNIK---TDICIAIFG-----G--VEG--HRDEVLSAD--FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        81 i~vwd~~---~~~~~~~~~-----~--~~~--~~~~i~~~~--~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      |++||+.   +++....+.     .  +..  +...+.++.  +++++.+|++++.|+.|++||+++++.+..+..    
T Consensus       135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----  210 (437)
T 3gre_A          135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN----  210 (437)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred             EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc----
Confidence            9999995   454443321     0  011  556677777  567899999999999999999999876654431    


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec-CC
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-FK  223 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~  223 (291)
                                            ..|...|.+++|+  +++|++++.||.|++||++..+            .+..+. .+
T Consensus       211 ----------------------~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~~~  256 (437)
T 3gre_A          211 ----------------------SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV------------LIRSWSFGD  256 (437)
T ss_dssp             ----------------------CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE------------EEEEEBCTT
T ss_pred             ----------------------CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc------------EEEEEecCC
Confidence                                  1177899999998  7799999999999999999863            366665 56


Q ss_pred             cccEEEEEEEec--CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec----------------------c--ccccce
Q psy10348        224 DCEIWFIRFSMD--YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH----------------------P--RCMSAV  277 (291)
Q Consensus       224 ~~~i~~~~~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------------~--~~~~~v  277 (291)
                      ...|..+++++.  |++.+|++|+.||.|++||+.+++..    ..+..                      .  .|...|
T Consensus       257 ~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v  332 (437)
T 3gre_A          257 HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ----YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL  332 (437)
T ss_dssp             CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE----EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred             CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE----EEEEcCCCCCccceecccccccccceecccccCCce
Confidence            667777766543  77899999999999999999987532    22220                      1  267788


Q ss_pred             eeeEEccCCceeeC
Q psy10348        278 RQTTLSKNGNVLLC  291 (291)
Q Consensus       278 ~~~~~s~~g~~l~s  291 (291)
                      ++++|+ ++++|++
T Consensus       333 ~~l~~~-~~~~l~s  345 (437)
T 3gre_A          333 STISVS-NDKILLT  345 (437)
T ss_dssp             CCEEEE-TTEEEEE
T ss_pred             EEEEEC-CceEEEe
Confidence            999999 7777764

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.1e-34  Score=224.18  Aligned_cols=227  Identities=22%  Similarity=0.372  Sum_probs=182.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|.+++|+|++    ++|++|+.||.|++||+++++.+..+.+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus        63 ~h~~~v~~~~~~~~~----~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~  137 (312)
T 4ery_A           63 GHKLGISDVAWSSDS----NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVK  137 (312)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred             cCCCceEEEEEcCCC----CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECC
Confidence            578899999999998    4999999999999999999999999999999999999999 88999999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-------ccccCCCCccccccCccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-------SYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  160 (291)
                      +++.+..+   ..|..+|.+++|+|++++|++++.||.|++||+++++....+..       .+.+.|++..........
T Consensus       138 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~  214 (312)
T 4ery_A          138 TGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN  214 (312)
T ss_dssp             TCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred             CCEEEEEe---cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence            99988888   78999999999999999999999999999999998876554321       345566554333222211


Q ss_pred             cC--------cccccccccCcceeE--EEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        161 HF--------PQFSTRDIHRNYVDC--VRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       161 ~~--------~~~~~~~~~~~~v~~--~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                      ..        .......+|.....+  ..+.   +.++++|+.||.|++||+.+.+.            +..+.+|...+
T Consensus       215 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~------------~~~~~~h~~~v  282 (312)
T 4ery_A          215 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI------------VQKLQGHTDVV  282 (312)
T ss_dssp             EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE------------EEEECCCSSCE
T ss_pred             eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh------------hhhhhccCCcE
Confidence            11        112233345443322  2332   67999999999999999988743            78888898887


Q ss_pred             EEEEEEecCCCcEEEEEc--CCCcEEEEEcC
Q psy10348        228 WFIRFSMDYWQKILAVGN--QSGRTYVWDLD  256 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~  256 (291)
                      ..+++  +|++.+|++++  .|+.|++|+..
T Consensus       283 ~~~~~--~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          283 ISTAC--HPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EEEEE--CSSSSEEEEEECTTTCCEEEEECC
T ss_pred             EEEee--cCcCCceEEEEccCCccEEEecCC
Confidence            76655  56699999987  69999999864

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-33  Score=219.72  Aligned_cols=219  Identities=16%  Similarity=0.183  Sum_probs=181.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|.+.|++++| |++    .+|++|+.||.|++||+.+++....+..|...|.+++|+| ++.+|++++.||.|++|++
T Consensus        15 ~~h~~~v~~~~~-~~~----~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~   88 (313)
T 3odt_A           15 KGHDQDVRDVVA-VDD----SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPL   88 (313)
T ss_dssp             CCCSSCEEEEEE-EET----TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred             hCCCCCcEEEEe-cCC----CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEe
Confidence            357899999999 887    4999999999999999999999999999999999999999 8999999999999999998


Q ss_pred             CCc---ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         87 KTD---ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        87 ~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ...   +.+..+   .+|...|.++.|  +++++++++.||.|++||  .++....                        
T Consensus        89 ~~~~~~~~~~~~---~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~------------------------  137 (313)
T 3odt_A           89 FATSGEDPLYTL---IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYN------------------------  137 (313)
T ss_dssp             TCCTTSCC-CEE---CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEE------------------------
T ss_pred             eecCCCCcccch---hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEe------------------------
Confidence            765   334444   789999999999  577999999999999999  3332222                        


Q ss_pred             ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCc
Q psy10348        164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~  239 (291)
                          ...|...+.++.|.   ++++++++.|+.|++||...              ....+.. +...+..+++.++  +.
T Consensus       138 ----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--------------~~~~~~~~~~~~i~~~~~~~~--~~  197 (313)
T 3odt_A          138 ----LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--------------VIKTFSGIHNDVVRHLAVVDD--GH  197 (313)
T ss_dssp             ----EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--------------EEEEECSSCSSCEEEEEEEET--TE
T ss_pred             ----cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--------------eEEEEeccCcccEEEEEEcCC--Ce
Confidence                23488889999985   77999999999999999432              2555665 7777888777754  77


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                       +++++.||.|++||+.+++.    ...  ...|.+.|++++|+|++.++
T Consensus       198 -~~~~~~dg~i~i~d~~~~~~----~~~--~~~~~~~i~~~~~~~~~~l~  240 (313)
T 3odt_A          198 -FISCSNDGLIKLVDMHTGDV----LRT--YEGHESFVYCIKLLPNGDIV  240 (313)
T ss_dssp             -EEEEETTSEEEEEETTTCCE----EEE--EECCSSCEEEEEECTTSCEE
T ss_pred             -EEEccCCCeEEEEECCchhh----hhh--hhcCCceEEEEEEecCCCEE
Confidence             99999999999999998752    222  33688899999999999544

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.3e-34  Score=232.57  Aligned_cols=244  Identities=11%  Similarity=0.006  Sum_probs=183.0

Q ss_pred             eecceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccC--CcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPA--FHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      .|.+.|++++|+|++.    +| ++|+.||.|++||+.  +++.+..+.  .|...|.+++|+| ++.+|++|+.||.|+
T Consensus       100 ~~~~~v~~~~~s~d~~----~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~  174 (450)
T 2vdu_B          100 PIYSYIRNLRLTSDES----RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVY  174 (450)
T ss_dssp             CCCCCEEEEEECTTSS----EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred             ccCCceEEEEEcCCCC----EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEE
Confidence            3455799999999984    75 899999999999999  888888886  5668899999999 899999999999999


Q ss_pred             EEECCCcceee-eeccccCCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         83 LWNIKTDICIA-IFGGVEGHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        83 vwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      +|++.+++... ....+.+|...|.+++|+|+   +++|++++.|+.|++||+++++.+..+                  
T Consensus       175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------------  236 (450)
T 2vdu_B          175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------------------  236 (450)
T ss_dssp             EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE------------------
T ss_pred             EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee------------------
Confidence            99998877554 22223689999999999999   999999999999999999987754432                  


Q ss_pred             cccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeee-------------eeecCCc
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII-------------NRLNFKD  224 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~~~~  224 (291)
                               ..+|...|.+++|+ +++|++++.|+.|++||+++++.............+             .......
T Consensus       237 ---------~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (450)
T 2vdu_B          237 ---------LFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE  307 (450)
T ss_dssp             ---------CCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred             ---------ecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence                     13488999999997 889999999999999999987643111000000000             0000112


Q ss_pred             ccEEEEEEEecCCCcEEEEEc-CCCcEEEEEc--CCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        225 CEIWFIRFSMDYWQKILAVGN-QSGRTYVWDL--DVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      ..+  ..+.++|++++|++++ .|+.|++|++  ..+..+   ........+ +.|.+++|+|++.++
T Consensus       308 ~~v--~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l---~~~~~~~~~-~~v~~~~~~~~~~~v  369 (450)
T 2vdu_B          308 FAV--SKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDL---ALKQIITFP-YNVISLSAHNDEFQV  369 (450)
T ss_dssp             CCE--EEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCE---EEEEEEECS-SCEEEEEEETTEEEE
T ss_pred             EEE--EEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCce---eeccEeccC-CceEEEEecCCcEEE
Confidence            233  4456667899999998 8999999999  443221   122222244 789999999965444

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=8.6e-34  Score=226.77  Aligned_cols=218  Identities=11%  Similarity=0.123  Sum_probs=173.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE--eeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF--YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|...|.+++|+|++    .+|++++.||.|++||+++++....+  ..|...|.+++|+| ++.+|++++.||.|++||
T Consensus        50 ~h~~~v~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d  124 (372)
T 1k8k_C           50 EHNGQVTGVDWAPDS----NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICY  124 (372)
T ss_dssp             CCSSCEEEEEEETTT----TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEE
T ss_pred             CCCCcccEEEEeCCC----CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEE
Confidence            478999999999988    59999999999999999888755444  57889999999999 889999999999999999


Q ss_pred             CCCcce---eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         86 IKTDIC---IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        86 ~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      ++.+..   ...+  ...|...|.+++|+|++++|++++.||.|++||++.........          ...+.......
T Consensus       125 ~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----------~~~~~~~~~~~  192 (372)
T 1k8k_C          125 FEQENDWWVCKHI--KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA----------PTPWGSKMPFG  192 (372)
T ss_dssp             EETTTTEEEEEEE--CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC----------CBTTBSCCCTT
T ss_pred             ecCCCcceeeeee--ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc----------ccccccccchh
Confidence            988763   2222  15789999999999999999999999999999987543211100          01111111111


Q ss_pred             cccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                      ........|...|.+++|+  +++|++++.|+.|++||+++.+.            +..+..+...+..+++++  ++++
T Consensus       193 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~~~~~~~~~~v~~~~~~~--~~~~  258 (372)
T 1k8k_C          193 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA------------VATLASETLPLLAVTFIT--ESSL  258 (372)
T ss_dssp             CEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE------------EEEEECSSCCEEEEEEEE--TTEE
T ss_pred             hheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce------------eEEEccCCCCeEEEEEec--CCCE
Confidence            2233344688999999997  77999999999999999988744            777788888888877775  4888


Q ss_pred             EEEEcCCCcEEEEEcCC
Q psy10348        241 LAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~  257 (291)
                      |++| .||.|++|++.+
T Consensus       259 l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          259 VAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             EEEE-TTSSCEEEEEET
T ss_pred             EEEE-eCCeEEEEEccC
Confidence            8888 899999999988

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.3e-33  Score=224.90  Aligned_cols=187  Identities=10%  Similarity=-0.001  Sum_probs=145.0

Q ss_pred             ceeEEEEecCCCcEEEE--eecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         58 AINELKFHPQDFNLLLS--VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        58 ~v~~~~~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      .+.+++|+| |++++++  ++.|++|+|||+++++++..+    .|...|.+++|+|+|+++++++. +.+++|+..+++
T Consensus       135 ~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~----~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~  208 (365)
T 4h5i_A          135 YTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEI----ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGS  208 (365)
T ss_dssp             CEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEE----ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCC
T ss_pred             CEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEe----CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCc
Confidence            367899999 8888765  457899999999999988887    57788999999999999999985 557777766665


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC----eEEEecCCCCCcccccc
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN----CIICWKPGRLEDKELRT  209 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~  209 (291)
                      .....                          ....|...|.+++|+  +.++++++.|+    .++.|++......    
T Consensus       209 ~~~~~--------------------------~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~----  258 (365)
T 4h5i_A          209 CIARK--------------------------TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS----  258 (365)
T ss_dssp             EEEEE--------------------------CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE----
T ss_pred             ceeee--------------------------ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec----
Confidence            43211                          113488889999998  77899988877    6888987665331    


Q ss_pred             CCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        210 NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       210 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                          ......+..+...|.+++|  +|+|++||+|+.|++|+|||+.++++    ...+ ..+|..+|++|+|||||++|
T Consensus       259 ----~~~~~~~~~~~~~V~~~~~--Spdg~~lasgs~D~~V~iwd~~~~~~----~~~~-~~gH~~~V~~v~fSpdg~~l  327 (365)
T 4h5i_A          259 ----VLRSKQVTNRFKGITSMDV--DMKGELAVLASNDNSIALVKLKDLSM----SKIF-KQAHSFAITEVTISPDSTYV  327 (365)
T ss_dssp             ----EEEEEEEESSCSCEEEEEE--CTTSCEEEEEETTSCEEEEETTTTEE----EEEE-TTSSSSCEEEEEECTTSCEE
T ss_pred             ----ceeeeeecCCCCCeEeEEE--CCCCCceEEEcCCCEEEEEECCCCcE----EEEe-cCcccCCEEEEEECCCCCEE
Confidence                0224556777777776655  57799999999999999999998742    1221 24799999999999999999


Q ss_pred             eC
Q psy10348        290 LC  291 (291)
Q Consensus       290 ~s  291 (291)
                      |+
T Consensus       328 aS  329 (365)
T 4h5i_A          328 AS  329 (365)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.9e-34  Score=233.05  Aligned_cols=227  Identities=17%  Similarity=0.265  Sum_probs=181.5

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ..++++|+..   .++++++.||.|+||++.+.    +.+..+.+|.+.|.+++|+|.++.+|++|+.||.|++||+.++
T Consensus        38 ~~~~~~~~~~---~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~  114 (402)
T 2aq5_A           38 GFCAVNPKFM---ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG  114 (402)
T ss_dssp             CSEEECSSEE---EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred             CcEEECCCeE---EEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence            3577888763   34556789999999998654    2345677899999999999977899999999999999999987


Q ss_pred             -------ceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         90 -------ICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        90 -------~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                             +.+..+   .+|...|.+++|+|++ .+|++++.|+.|++||+++++....+.                    
T Consensus       115 ~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------  171 (402)
T 2aq5_A          115 GLVLPLREPVITL---EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG--------------------  171 (402)
T ss_dssp             CCSSCBCSCSEEE---ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC--------------------
T ss_pred             CCccccCCceEEe---cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe--------------------
Confidence                   455566   7899999999999998 699999999999999999887654431                    


Q ss_pred             CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCccc-EEEEEEEecCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCE-IWFIRFSMDYW  237 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~  237 (291)
                            ...|...|.+++|+  +++|++++.|+.|++||+++++.            +..+ ..|... +..+  .++|+
T Consensus       172 ------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~  231 (402)
T 2aq5_A          172 ------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV------------VAEKDRPHEGTRPVHA--VFVSE  231 (402)
T ss_dssp             ------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE------------EEEEECSSCSSSCCEE--EECST
T ss_pred             ------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce------------eeeeccCCCCCcceEE--EEcCC
Confidence                  02488899999998  77999999999999999988743            5555 455543 4444  45577


Q ss_pred             CcEEEEE---cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        238 QKILAVG---NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       238 ~~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++|++|   +.|+.|++||+.+.+...   .... ..+...+.+++|+|++++|+
T Consensus       232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~l~  283 (402)
T 2aq5_A          232 GKILTTGFSRMSERQVALWDTKHLEEPL---SLQE-LDTSSGVLLPFFDPDTNIVY  283 (402)
T ss_dssp             TEEEEEEECTTCCEEEEEEETTBCSSCS---EEEE-CCCCSSCEEEEEETTTTEEE
T ss_pred             CcEEEEeccCCCCceEEEEcCccccCCc---eEEe-ccCCCceeEEEEcCCCCEEE
Confidence            9999999   899999999999876421   2222 24567899999999999885

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=6.4e-34  Score=220.72  Aligned_cols=207  Identities=18%  Similarity=0.260  Sum_probs=164.8

Q ss_pred             eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348          8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i   81 (291)
                      .|.++|++++|+++  +    .+|++|+.||+|++||+++++  .+..+.+|...|.+++|+| +  +.+|++++.|+.|
T Consensus        51 gH~~~V~~v~~s~~~~g----~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v  125 (297)
T 2pm7_B           51 GHEGPVWRVDWAHPKFG----TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPMLLVASSDGKV  125 (297)
T ss_dssp             CCSSCEEEEEECCGGGC----SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEE
T ss_pred             cccCCeEEEEecCCCcC----CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCc-CCCCcEEEEEECCCcE
Confidence            58899999999874  4    599999999999999998874  5667788999999999999 5  7899999999999


Q ss_pred             EEEECCCcce--eeeeccccCCCCceEEEEEccC-------------CCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348         82 RLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLL-------------GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        82 ~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      ++||++++..  ...+   .+|...|.+++|+|+             +++|++|+.|+.|++||+++++....       
T Consensus       126 ~~wd~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-------  195 (297)
T 2pm7_B          126 SVVEFKENGTTSPIII---DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-------  195 (297)
T ss_dssp             EEEEBCSSSCBCCEEE---ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-------
T ss_pred             EEEEecCCCceeeeee---ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-------
Confidence            9999987642  2334   689999999999997             57999999999999999987652111       


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEcC-----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG-----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-  220 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-  220 (291)
                                       ....+.+|...|.+++|++     .+|++++.|++|++||++.....         .....+ 
T Consensus       196 -----------------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~---------~~~~~~~  249 (297)
T 2pm7_B          196 -----------------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP---------WKKTLLK  249 (297)
T ss_dssp             -----------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC---------CEEEESS
T ss_pred             -----------------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc---------cceeeee
Confidence                             1122346999999999983     58999999999999998764311         001112 


Q ss_pred             -cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        221 -NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       221 -~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                       ..+...++.++  ++|++++||+++.||.|++|+...
T Consensus       250 ~~~~~~~v~~~~--~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          250 EEKFPDVLWRAS--WSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             SSCCSSCEEEEE--ECSSSCCEEEEETTSCEEEEEECT
T ss_pred             cccCCCcEEEEE--ECCCCCEEEEEcCCCcEEEEEECC
Confidence             34556666555  456799999999999999999874

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=8.4e-34  Score=231.59  Aligned_cols=227  Identities=19%  Similarity=0.319  Sum_probs=189.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|.+++|  ++    .+|++|+.||.|++||+.+++.+..+.+|...|.+++|++   .++++|+.||.|++||+.
T Consensus       171 ~h~~~v~~l~~--~~----~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~  241 (435)
T 1p22_A          171 GHTGSVLCLQY--DE----RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMA  241 (435)
T ss_dssp             CCSSCEEEEEC--CS----SEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECS
T ss_pred             CCCCcEEEEEE--CC----CEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCC
Confidence            47889999999  44    5999999999999999999999999999999999999976   599999999999999999


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++.......+.+|...|.+++|  +++++++|+.||.|++||+++++.+..+                           
T Consensus       242 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~---------------------------  292 (435)
T 1p22_A          242 SPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL---------------------------  292 (435)
T ss_dssp             SSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE---------------------------
T ss_pred             CCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEE---------------------------
Confidence            88766332233789999999999  6889999999999999999988765544                           


Q ss_pred             ccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS  247 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d  247 (291)
                       .+|...|.++.|+++++++|+.||.|++||+++++.            +..+.+|...+..+++    ++.+|++|+.|
T Consensus       293 -~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~------------~~~~~~h~~~v~~~~~----~~~~l~sg~~d  355 (435)
T 1p22_A          293 -NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC------------LRVLEGHEELVRCIRF----DNKRIVSGAYD  355 (435)
T ss_dssp             -ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEEEEC----CSSEEEEEETT
T ss_pred             -cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCE------------EEEEeCCcCcEEEEEe----cCCEEEEEeCC
Confidence             348889999999999999999999999999998744            7788888888887665    48999999999


Q ss_pred             CcEEEEEcCCCCCCcc---eeEEEeccccccceeeeEEccCCceeeC
Q psy10348        248 GRTYVWDLDVQDPSSI---KFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |.|++||+.+++....   ........+|.+.|.+++|  ++++|++
T Consensus       356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s  400 (435)
T 1p22_A          356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVS  400 (435)
T ss_dssp             SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEE
T ss_pred             CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEE
Confidence            9999999976542111   0022233478899999999  6666653

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-33  Score=223.22  Aligned_cols=229  Identities=11%  Similarity=0.212  Sum_probs=187.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-----CeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-----HTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~   82 (291)
                      .|...|.+++|+|++    ++|++++.||.|++||+.+++.+..+. +...|.+++|+| ++.++++++.+     |.|+
T Consensus        72 ~h~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~  145 (369)
T 3zwl_B           72 GHTGTIWSIDVDCFT----KYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSIN  145 (369)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEE
T ss_pred             hcCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEE
Confidence            478999999999988    599999999999999999999988887 889999999999 89999999998     9999


Q ss_pred             EEECCCcceeeee--------ccccCCCC--ceEEEEEccCCCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCCc
Q psy10348         83 LWNIKTDICIAIF--------GGVEGHRD--EVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPARS  151 (291)
Q Consensus        83 vwd~~~~~~~~~~--------~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~  151 (291)
                      +||+..+.....+        ..+..|..  .+.+++|+|++++|++++.||.|++||+++ .+....+           
T Consensus       146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------  214 (369)
T 3zwl_B          146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI-----------  214 (369)
T ss_dssp             EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE-----------
T ss_pred             EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE-----------
Confidence            9999865422111        01134555  899999999999999999999999999987 4433332           


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF  229 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (291)
                                       ..|...|.+++|+  +++|++++.|+.|++||+++.+.            +..+. +...+..
T Consensus       215 -----------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------~~~~~-~~~~~~~  264 (369)
T 3zwl_B          215 -----------------DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV------------LKKYE-TDCPLNT  264 (369)
T ss_dssp             -----------------ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE------------EEEEE-CSSCEEE
T ss_pred             -----------------ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce------------eeeec-CCCCcee
Confidence                             3488899999998  77999999999999999988754            44444 4444554


Q ss_pred             EEEEecCCCcEEEEEcCCC--------------cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        230 IRFSMDYWQKILAVGNQSG--------------RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        ++++|+++++++++.++              .+++||+.+++.    ..  ...+|...|++++|+|+|++|++
T Consensus       265 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~--~~~~~~~~v~~~~~s~~~~~l~s  332 (369)
T 3zwl_B          265 --AVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE----IG--RVQGHFGPLNTVAISPQGTSYAS  332 (369)
T ss_dssp             --EEECSSSSEEEEEECCC-------------CEEEEEETTTCCE----EE--EEECCSSCEEEEEECTTSSEEEE
T ss_pred             --EEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc----hh--heecccCcEEEEEECCCCCEEEE
Confidence              45567799999999988              899999998852    22  23478899999999999999874

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-33  Score=231.05  Aligned_cols=250  Identities=11%  Similarity=0.076  Sum_probs=185.5

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC---CcceeEEEeee------------ccceeEEE--Eec
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA---FHACVRHFYGH------------GHAINELK--FHP   66 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~---~~~~~~~~~~~------------~~~v~~~~--~~~   66 (291)
                      .....|...|++++|+|++    .+|++|+.||.|++||++   +++.+..+..|            ...+.++.  +++
T Consensus       105 ~~~~~h~~~v~~~~~~~~~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  180 (437)
T 3gre_A          105 SLTYDCSSTVTQITMIPNF----DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE  180 (437)
T ss_dssp             SEEEECSSCEEEEEECTTS----SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred             eeeccCCCCEEEEEEeCCC----CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence            3445689999999999988    499999999999999994   56655555433            33455555  446


Q ss_pred             CCCcEEEEeecCCeEEEEECCCcceeeeeccccC--CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcccc
Q psy10348         67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG--HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~  144 (291)
                       ++.+|++|+.||.|++||+++++.+..+   ..  |...|.+++|+|++++|++|+.||.|++||+++++.+..+.   
T Consensus       181 -~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---  253 (437)
T 3gre_A          181 -EKSLLVALTNLSRVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS---  253 (437)
T ss_dssp             -SCEEEEEEETTSEEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB---
T ss_pred             -CCCEEEEEeCCCeEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe---
Confidence             7899999999999999999999998888   45  88999999999999999999999999999999877655432   


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEc------CCEEEEecCCCeEEEecCCCCCccccccCCC-cee--
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL------GDFVLSKSCENCIICWKPGRLEDKELRTNET-NVT--  215 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~--  215 (291)
                                              ..|...|.+++|+      +.+|++++.|+.|++||+++++......... ...  
T Consensus       254 ------------------------~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  309 (437)
T 3gre_A          254 ------------------------FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSME  309 (437)
T ss_dssp             ------------------------CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGG
T ss_pred             ------------------------cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccc
Confidence                                    1377789999776      3489999999999999998775431111000 000  


Q ss_pred             -------e--eeeecC--CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEE-----------------
Q psy10348        216 -------I--INRLNF--KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQI-----------------  267 (291)
Q Consensus       216 -------~--~~~~~~--~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-----------------  267 (291)
                             .  -..+.+  |...+..+++. +  +++|++|+.||.|++||+.+++........                 
T Consensus       310 ~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (437)
T 3gre_A          310 HFLPIEKGLEELNFCGIRSLNALSTISVS-N--DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLT  386 (437)
T ss_dssp             GGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T--TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEE
T ss_pred             eecccccccccceecccccCCceEEEEEC-C--ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceE
Confidence                   0  001222  56667777776 3  799999999999999999988644221100                 


Q ss_pred             --------------EeccccccceeeeEEccC--CceeeC
Q psy10348        268 --------------LSHPRCMSAVRQTTLSKN--GNVLLC  291 (291)
Q Consensus       268 --------------~~~~~~~~~v~~~~~s~~--g~~l~s  291 (291)
                                    .....|...|++++|+++  +.+|++
T Consensus       387 ~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s  426 (437)
T 3gre_A          387 MLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVA  426 (437)
T ss_dssp             EEEEECC-------------CCCEEEEEEEESSSSEEEEE
T ss_pred             EEEEecccccccccCcccccccceeeEeeeccCCceEEEE
Confidence                          001138889999999998  777764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.8e-33  Score=246.40  Aligned_cols=226  Identities=19%  Similarity=0.260  Sum_probs=193.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|..+|.+++|+|++    ++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++++.||.|++||+.
T Consensus        53 ~~~~~v~~~~~s~~~----~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~  127 (814)
T 3mkq_A           53 VTETPVRAGKFIARK----NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWE  127 (814)
T ss_dssp             CCSSCEEEEEEEGGG----TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGG
T ss_pred             cCCCcEEEEEEeCCC----CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECC
Confidence            478999999999999    4999999999999999999999999999999999999999 88999999999999999998


Q ss_pred             Cc-ceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         88 TD-ICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        88 ~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ++ .....+   .+|...|.+++|+| ++..|++++.||.|++||+.++.....+.                        
T Consensus       128 ~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~------------------------  180 (814)
T 3mkq_A          128 NNWALEQTF---EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT------------------------  180 (814)
T ss_dssp             GTSEEEEEE---ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE------------------------
T ss_pred             CCceEEEEE---cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe------------------------
Confidence            87 555555   68999999999999 88899999999999999998776543332                        


Q ss_pred             ccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        166 STRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                         ..+...+.+++|+    +.++++++.|+.|++||+.+..            .+..+..|...+..++++  |++.+|
T Consensus       181 ---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~------------~~~~~~~~~~~v~~~~~~--~~~~~l  243 (814)
T 3mkq_A          181 ---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS------------CVATLEGHMSNVSFAVFH--PTLPII  243 (814)
T ss_dssp             ---CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE------------EEEEEECCSSCEEEEEEC--SSSSEE
T ss_pred             ---cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc------------EEEEEcCCCCCEEEEEEc--CCCCEE
Confidence               1245778899995    5699999999999999998773            377778888888776655  669999


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                      ++++.||.|++||+.+++.    ...  ...+...+.+++|+|+|+.
T Consensus       244 ~~~~~dg~v~vwd~~~~~~----~~~--~~~~~~~v~~~~~~~~~~~  284 (814)
T 3mkq_A          244 ISGSEDGTLKIWNSSTYKV----EKT--LNVGLERSWCIATHPTGRK  284 (814)
T ss_dssp             EEEETTSCEEEEETTTCSE----EEE--ECCSSSSEEEEEECTTCGG
T ss_pred             EEEeCCCeEEEEECCCCcE----EEE--eecCCCcEEEEEEccCCCc
Confidence            9999999999999998742    223  3356789999999999873

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=3e-33  Score=228.99  Aligned_cols=251  Identities=17%  Similarity=0.331  Sum_probs=188.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.+.|.+++|+++      ++++|+.||.|++||+++++.+..+.+|...|.+++|++   ..+++|+.||.|++||+.
T Consensus       157 ~h~~~v~~~~~~~~------~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~  227 (445)
T 2ovr_B          157 GHTGGVWSSQMRDN------IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIE  227 (445)
T ss_dssp             CCSSCEEEEEEETT------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESS
T ss_pred             CCCCCEEEEEecCC------EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECC
Confidence            47888888888888      688888888888888888888888888888888888865   568888888888888888


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc------ccccCC--------CCccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE------SYTFNP--------ARSTR  153 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------~~~~~~--------~~~~~  153 (291)
                      +++.+..+   .+|...|.++.|  ++.++++++.||.|++||+++++.+..+..      .+.+..        ++...
T Consensus       228 ~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~  302 (445)
T 2ovr_B          228 TGQCLHVL---MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR  302 (445)
T ss_dssp             SCCEEEEE---ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEE
T ss_pred             CCcEEEEE---cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEE
Confidence            88888888   678888888888  677888888888888888887777666553      122211        11111


Q ss_pred             cccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC---CcccEEEE
Q psy10348        154 PFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF---KDCEIWFI  230 (291)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~  230 (291)
                      .++...  ........+|...+.++.++++++++++.||.|++||+++++.            +..+..   +...+..+
T Consensus       303 i~d~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~------------~~~~~~~~~~~~~v~~~  368 (445)
T 2ovr_B          303 VWDVET--GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC------------LQTLQGPNKHQSAVTCL  368 (445)
T ss_dssp             EEETTT--CCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCE------------EEEECSTTSCSSCEEEE
T ss_pred             EEECCC--CCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcE------------EEEEccCCCCCCCEEEE
Confidence            111111  1223344578889999999999999999999999999988754            555554   66667665


Q ss_pred             EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+  +  +++|++|+.||.|++||+.+++.+... ......+|.+.|.+++|+|+|.+|++
T Consensus       369 ~~--~--~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~la~  424 (445)
T 2ovr_B          369 QF--N--KNFVITSSDDGTVKLWDLKTGEFIRNL-VTLESGGSGGVVWRIRASNTKLVCAV  424 (445)
T ss_dssp             EE--C--SSEEEEEETTSEEEEEETTTCCEEEEE-EECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred             EE--C--CCEEEEEeCCCeEEEEECCCCceeeee-eccccCCCCceEEEEEecCCEEEEEE
Confidence            54  4  789999999999999999998643211 11122367889999999999998874

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=6.4e-33  Score=226.37  Aligned_cols=220  Identities=20%  Similarity=0.376  Sum_probs=187.0

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      |...|+|++|  ++    +++++|+.||.|++||+.+++.+..+.+|...|.+++|   ++.+|++|+.||.|++||+.+
T Consensus       132 ~~~~v~~~~~--d~----~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~  202 (435)
T 1p22_A          132 TSKGVYCLQY--DD----QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNT  202 (435)
T ss_dssp             SCCCEEEEEC--CS----SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSS
T ss_pred             CCCcEEEEEE--CC----CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCC
Confidence            4567888887  45    59999999999999999999999999999999999998   457999999999999999999


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++.+..+   .+|...|.+++|+  +..+++|+.||.|++||++++.....                         ....
T Consensus       203 ~~~~~~~---~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~-------------------------~~~~  252 (435)
T 1p22_A          203 GEMLNTL---IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL-------------------------RRVL  252 (435)
T ss_dssp             CCEEEEE---CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEE-------------------------EEEE
T ss_pred             CcEEEEE---cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCcee-------------------------eeEe
Confidence            9998888   7899999999997  45999999999999999988764311                         1122


Q ss_pred             cccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       169 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      .+|...|.+++|+++++++++.|+.|++||+++.+.            +..+..|...+.++.+  +  +.++++|+.||
T Consensus       253 ~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~------------~~~~~~~~~~v~~~~~--~--~~~l~~g~~dg  316 (435)
T 1p22_A          253 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF------------VRTLNGHKRGIACLQY--R--DRLVVSGSSDN  316 (435)
T ss_dssp             CCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE------------EEEEECCSSCEEEEEE--E--TTEEEEEETTS
T ss_pred             cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE------------EEEEcCCCCcEEEEEe--C--CCEEEEEeCCC
Confidence            458899999999999999999999999999988744            7778888888877665  3  88999999999


Q ss_pred             cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|++||+.+++.      .....+|...|.+++|  ++++|++
T Consensus       317 ~i~iwd~~~~~~------~~~~~~h~~~v~~~~~--~~~~l~s  351 (435)
T 1p22_A          317 TIRLWDIECGAC------LRVLEGHEELVRCIRF--DNKRIVS  351 (435)
T ss_dssp             CEEEEETTTCCE------EEEECCCSSCEEEEEC--CSSEEEE
T ss_pred             eEEEEECCCCCE------EEEEeCCcCcEEEEEe--cCCEEEE
Confidence            999999998752      2233478889999999  6777763

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=3e-33  Score=230.22  Aligned_cols=226  Identities=17%  Similarity=0.291  Sum_probs=189.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEec-CCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|.+.|.+++|+|++     ++++|+.||+|++||+++++.+..+.+|...|.+++|++ .++.++++|+.||.|++||+
T Consensus       160 ~h~~~V~~l~~~~~~-----~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~  234 (464)
T 3v7d_B          160 GHDGGVWALKYAHGG-----ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL  234 (464)
T ss_dssp             CCSSCEEEEEECSTT-----EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEEC
T ss_pred             CCCcCEEEEEEcCCC-----EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeC
Confidence            488999999999876     999999999999999999999999999999999999984 26789999999999999999


Q ss_pred             CCcceeee--------------------eccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348         87 KTDICIAI--------------------FGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        87 ~~~~~~~~--------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      .++.....                    ...+.+|...|.++  +++++++++++.||.|++||+++++.+..+      
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~------  306 (464)
T 3v7d_B          235 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL------  306 (464)
T ss_dssp             CCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE------
T ss_pred             CCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe------
Confidence            87653211                    11226888888887  567899999999999999999988765443      


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                                            .+|...|.+++|+  ++++++++.|+.|++||+++++            .+..+..|.
T Consensus       307 ----------------------~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------------~~~~~~~h~  352 (464)
T 3v7d_B          307 ----------------------SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE------------LMYTLQGHT  352 (464)
T ss_dssp             ----------------------CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE------------EEEEECCCS
T ss_pred             ----------------------cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc------------EEEEEeCCC
Confidence                                  3488999999998  6799999999999999998874            478888898


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ..+..+.+  +  +.+|++|+.||.|++||+.+...    ....   .+...+..++|+|++++|++
T Consensus       353 ~~v~~~~~--~--~~~l~s~s~dg~v~vwd~~~~~~----~~~~---~~~~~~~~~~~~~~~~~l~~  408 (464)
T 3v7d_B          353 ALVGLLRL--S--DKFLVSAAADGSIRGWDANDYSR----KFSY---HHTNLSAITTFYVSDNILVS  408 (464)
T ss_dssp             SCEEEEEE--C--SSEEEEEETTSEEEEEETTTCCE----EEEE---ECTTCCCEEEEEECSSEEEE
T ss_pred             CcEEEEEE--c--CCEEEEEeCCCcEEEEECCCCce----eeee---cCCCCccEEEEEeCCCEEEE
Confidence            88877665  4  78999999999999999998642    1222   24567888999999999874

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-33  Score=246.03  Aligned_cols=212  Identities=11%  Similarity=0.102  Sum_probs=170.1

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ....|.+.|++++|+|++    .+||+|+.||.|+||+..+.+....+ .|..+|.+++|+| + ++|++++.|++|++|
T Consensus        12 ~~~gh~~~V~~lafspdg----~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW   84 (902)
T 2oaj_A           12 NKYGMSSKPIAAAFDFTQ----NLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-G-IYLVVINAKDTVYVL   84 (902)
T ss_dssp             EEEECSSCEEEEEEETTT----TEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred             cccCCCCCcEEEEECCCC----CEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence            345688999999999999    59999999999999999877765554 4788999999999 4 599999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |+.+++.+..+    .|...|++++|+|++++|++|+.||.|++||+++++.. .+..     +        .    ...
T Consensus        85 d~~~~~~~~~~----~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i-----~--------~----~~~  142 (902)
T 2oaj_A           85 SLYSQKVLTTV----FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKL-----D--------N----LQK  142 (902)
T ss_dssp             ETTTCSEEEEE----ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEE-----C--------C----HHH
T ss_pred             ECCCCcEEEEE----cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-ccee-----c--------c----ccc
Confidence            99999988887    36789999999999999999999999999999887642 1000     0        0    000


Q ss_pred             c-ccccccCcceeEEEEcC---CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC-----------------
Q psy10348        165 F-STRDIHRNYVDCVRWLG---DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK-----------------  223 (291)
Q Consensus       165 ~-~~~~~~~~~v~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  223 (291)
                      . ....+|..+|.+++|++   ..+++|+.|+.| +||+++.+.            +..+..+                 
T Consensus       143 ~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~~~  209 (902)
T 2oaj_A          143 SSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI------------KQSFIYELPPFAPGGDFSEKTNEK  209 (902)
T ss_dssp             HHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE------------EEEECCCBCTTCCCSTTCCCTTSC
T ss_pred             cccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce------------EEEEecccCCcCCCcccccccccc
Confidence            0 12245889999999984   589999999999 999988744            3334333                 


Q ss_pred             -cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        224 -DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       224 -~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                       ...|..++  ++|+|++|++|+.||.|++||+.++++
T Consensus       210 h~~~V~~v~--fspdg~~lasgs~Dg~i~lWd~~~g~~  245 (902)
T 2oaj_A          210 RTPKVIQSL--YHPNSLHIITIHEDNSLVFWDANSGHM  245 (902)
T ss_dssp             BCCCEEEEE--ECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred             cCCCeEEEE--EcCCCCEEEEEECCCeEEEEECCCCcE
Confidence             34566554  557799999999999999999998753

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.7e-34  Score=232.53  Aligned_cols=234  Identities=12%  Similarity=0.069  Sum_probs=173.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--eccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--HGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|++++|+|...   .+|++|+.||+|++||++++........  +...+.+++|+| ++.+|++|+.||.|++||
T Consensus       162 gH~~~V~~l~f~p~~~---~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd  237 (435)
T 4e54_B          162 GAGGSITGLKFNPLNT---NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLN  237 (435)
T ss_dssp             SSSCCCCEEEECSSCT---TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEE
T ss_pred             CCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeec
Confidence            4889999999998432   5999999999999999986554333332  334678999999 899999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++ ++.+..+   .+|...|.+++|+|++. +|++++.|+.|++||+++.+....+.                       
T Consensus       238 ~~-~~~~~~~---~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~-----------------------  290 (435)
T 4e54_B          238 MD-GKELWNL---RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL-----------------------  290 (435)
T ss_dssp             SS-SCBCCCS---BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS-----------------------
T ss_pred             cC-cceeEEE---ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE-----------------------
Confidence            87 4555555   78999999999999986 78899999999999998876433221                       


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc----ccEEEEEEEecCCC
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD----CEIWFIRFSMDYWQ  238 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~  238 (291)
                        ...+|...|++++|+  +++|++++.|+.|++||++++...            ..+..+.    ..+..+...++|++
T Consensus       291 --~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~  356 (435)
T 4e54_B          291 --YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP------------LGLIPHPHRHFQHLTPIKAAWHPRY  356 (435)
T ss_dssp             --BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE------------EEECCCCCCCCSSSCCCBCEECSSS
T ss_pred             --EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc------------eEEecccccccccceeEEEEEcCCC
Confidence              123488999999998  789999999999999999887653            1111111    11112223334444


Q ss_pred             cEEEEEc------------CCCcEEEEEcCCCCCCcceeEEEeccccccceeee-EEccCCceeeC
Q psy10348        239 KILAVGN------------QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQT-TLSKNGNVLLC  291 (291)
Q Consensus       239 ~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~s  291 (291)
                      .+++++.            .++.|++||..+++.    ...+ ..+|...|.++ +|+|+|++|++
T Consensus       357 ~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~----~~~l-~~~~~~~v~s~~~fspdg~~las  417 (435)
T 4e54_B          357 NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM----MCQL-YDPESSGISSLNEFNPMGDTLAS  417 (435)
T ss_dssp             SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE----EEEE-CCSSCCCCCCEEEECTTSSCEEE
T ss_pred             CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE----EEEE-eCCCCCcEEEEEEECCCCCEEEE
Confidence            4444443            346799999998853    2222 23677888887 69999999874

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=2.2e-33  Score=223.70  Aligned_cols=203  Identities=13%  Similarity=0.070  Sum_probs=163.3

Q ss_pred             cceeEEEEeeeccCCCCCEEE--EecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         10 EENFYTCAWSMDLESGRPLLA--VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~--~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      +..+.+++||||+.    +++  +++.|++|+|||+++++++..+. |...|.+++|+| ++++|++++.+ .+.+|+..
T Consensus       133 ~~~~~~v~fSpDg~----~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~  205 (365)
T 4h5i_A          133 DDYTKLVYISREGT----VAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTV  205 (365)
T ss_dssp             TCCEEEEEECTTSS----CEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETT
T ss_pred             ccCEEEEEEcCCCC----EEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEec
Confidence            45588999999994    765  45578999999999999988886 778899999999 99999999855 56677777


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC----cEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH----SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      +++.+... ....|...|.+++|+|+++++++++.|+    .+++|++........                        
T Consensus       206 ~~~~~~~~-~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~------------------------  260 (365)
T 4h5i_A          206 TGSCIARK-TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL------------------------  260 (365)
T ss_dssp             TCCEEEEE-CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE------------------------
T ss_pred             cCcceeee-ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce------------------------
Confidence            67665432 1257889999999999999999999887    588888876542211                        


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~  240 (291)
                      ......+|...|++++|+  +++|++|+.|++|++||+++++.            +..+ .+|...|+.++|+  |||++
T Consensus       261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~------------~~~~~~gH~~~V~~v~fS--pdg~~  326 (365)
T 4h5i_A          261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM------------SKIFKQAHSFAITEVTIS--PDSTY  326 (365)
T ss_dssp             EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE------------EEEETTSSSSCEEEEEEC--TTSCE
T ss_pred             eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE------------EEEecCcccCCEEEEEEC--CCCCE
Confidence            011223588899999998  78999999999999999998743            6664 7899998877665  66999


Q ss_pred             EEEEcCCCcEEEEEcCCC
Q psy10348        241 LAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~  258 (291)
                      ||+|+.|++|+|||+...
T Consensus       327 laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          327 VASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             EEEEETTSEEEEEECCTT
T ss_pred             EEEEeCCCeEEEEEcCCC
Confidence            999999999999999754

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=8.5e-34  Score=221.91  Aligned_cols=212  Identities=17%  Similarity=0.226  Sum_probs=164.5

Q ss_pred             eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC-CcEEEEeecCCeEE
Q psy10348          8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD-FNLLLSVSKDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~   82 (291)
                      .|.+.|++++|+++  +    .+|++|+.|++|++||+++++  .+..+.+|...|.+++|+|+. +.+|++|+.|+.|+
T Consensus        55 gH~~~V~~v~~~~~~~~----~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~  130 (316)
T 3bg1_A           55 GHEGPVWQVAWAHPMYG----NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS  130 (316)
T ss_dssp             CCSSCEEEEEECCGGGS----SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred             CCCccEEEEEeCCCCCC----CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence            47899999999864  4    599999999999999998874  566778899999999999932 78999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccC-----------------CCEEEEEecCCcEEEEeccCchhhhhhccccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLL-----------------GTKIMSCGMDHSLKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~  145 (291)
                      +||++.+........+.+|...|.+++|+|+                 +++|++|+.|+.|++||++......       
T Consensus       131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-------  203 (316)
T 3bg1_A          131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK-------  203 (316)
T ss_dssp             EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE-------
T ss_pred             EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc-------
Confidence            9999876433222233789999999999997                 4689999999999999996542100       


Q ss_pred             cCCCCccccccCccccCcccccccccCcceeEEEEc--C----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeee
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR  219 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  219 (291)
                                        ....+.+|...|.+++|+  +    ++|++++.|++|++||+.......        .....
T Consensus       204 ------------------~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~--------~~~~~  257 (316)
T 3bg1_A          204 ------------------EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT--------WSPKL  257 (316)
T ss_dssp             ------------------EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC--------CBCCE
T ss_pred             ------------------eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc--------hhhhh
Confidence                              011234599999999998  2    589999999999999987632100        00122


Q ss_pred             ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        220 LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      +..+...++.++|  +|++++||+++.||.|++|+....
T Consensus       258 ~~~~~~~v~~v~~--sp~g~~las~~~D~~v~lw~~~~~  294 (316)
T 3bg1_A          258 LHKFNDVVWHVSW--SITANILAVSGGDNKVTLWKESVD  294 (316)
T ss_dssp             EEECSSCEEEEEE--CTTTCCEEEEESSSCEEEEEECTT
T ss_pred             hhcCCCcEEEEEE--cCCCCEEEEEcCCCeEEEEEECCC
Confidence            3345666776555  577999999999999999998643

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2e-32  Score=232.59  Aligned_cols=261  Identities=11%  Similarity=0.147  Sum_probs=202.6

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc---ceeEEEEecCC-CcEEEEeecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH---AINELKFHPQD-FNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~-~~~l~s~~~dg~i~v   83 (291)
                      .|...|.+++|+|++.   .++++++.||.|++||+.+++.+..+.+|..   .|.+++|+| + +++|++++.||.|++
T Consensus       158 ~~~~~v~~~~~~~~~~---~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~v  233 (615)
T 1pgu_A          158 GHSQRINACHLKQSRP---MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISC  233 (615)
T ss_dssp             SCSSCEEEEEECSSSS---CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEE
T ss_pred             cCCccEEEEEECCCCC---cEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEE
Confidence            4778999999999984   4899999999999999999999999999999   999999999 7 999999999999999


Q ss_pred             EECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc-------------------
Q psy10348         84 WNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES-------------------  143 (291)
Q Consensus        84 wd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------------------  143 (291)
                      ||+.+++.+..+. ....|...|.+++|+ ++++|++++.|+.|++||+++++.+..+...                   
T Consensus       234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  312 (615)
T 1pgu_A          234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI  312 (615)
T ss_dssp             EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEE
T ss_pred             EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeE
Confidence            9999998887762 111799999999999 9999999999999999999876654332211                   


Q ss_pred             --------------------------------ccc---------------------------------CCC---------
Q psy10348        144 --------------------------------YTF---------------------------------NPA---------  149 (291)
Q Consensus       144 --------------------------------~~~---------------------------------~~~---------  149 (291)
                                                      +.+                                 .+.         
T Consensus       313 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d  392 (615)
T 1pgu_A          313 ISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWD  392 (615)
T ss_dssp             EEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETT
T ss_pred             EEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCC
Confidence                                            000                                 000         


Q ss_pred             CccccccCc----------------------------------------------------------------cccCc--
Q psy10348        150 RSTRPFDTQ----------------------------------------------------------------KEHFP--  163 (291)
Q Consensus       150 ~~~~~~~~~----------------------------------------------------------------~~~~~--  163 (291)
                      +....+...                                                                .....  
T Consensus       393 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~  472 (615)
T 1pgu_A          393 DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVF  472 (615)
T ss_dssp             TEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEE
T ss_pred             CCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEE
Confidence            000000000                                                                00000  


Q ss_pred             -----cc--ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEE
Q psy10348        164 -----QF--STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFS  233 (291)
Q Consensus       164 -----~~--~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~  233 (291)
                           ..  .....|...|.+++|+  +++|++++.|+.|++||+.+.+.            +..+.. |...+..++++
T Consensus       473 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~h~~~v~~~~~s  540 (615)
T 1pgu_A          473 KLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV------------KTSRWAFRTSKINAISWK  540 (615)
T ss_dssp             ETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------EECCSCCCSSCEEEEEEC
T ss_pred             ECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc------------eeEeecCCCCceeEEEEc
Confidence                 00  3345688899999997  78999999999999999988743            666666 88888877666


Q ss_pred             ecC--------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        234 MDY--------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       234 ~~~--------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +..        ++++|++|+.||.|++||+.++..     ......+|...|++++|+|+++ |++
T Consensus       541 p~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~h~~~v~~l~~s~~~~-l~s  600 (615)
T 1pgu_A          541 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-----IIKALNAHKDGVNNLLWETPST-LVS  600 (615)
T ss_dssp             CCC------CCSCCEEEEEETTSCEEEEESSCTTC-----CEEETTSSTTCEEEEEEEETTE-EEE
T ss_pred             CccccccccccCCCEEEEEcCCCcEEEEECCCCce-----echhhhcCccceEEEEEcCCCC-eEE
Confidence            400        699999999999999999998732     2233457889999999999999 764

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.1e-33  Score=224.17  Aligned_cols=211  Identities=11%  Similarity=0.131  Sum_probs=175.2

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      .+++++.||.|++||+.+++....+.. |...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+   .+|...|.
T Consensus       105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~  180 (401)
T 4aez_A          105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTM---AGHQARVG  180 (401)
T ss_dssp             SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEE
T ss_pred             CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEe---cCCCCceE
Confidence            577788999999999999998887775 789999999999 9999999999999999999999988888   79999999


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCE
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDF  184 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~  184 (291)
                      +++|  ++.+|++++.||.|++||++.....                           .....+|...|.+++|+  +++
T Consensus       181 ~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~~~~  231 (401)
T 4aez_A          181 CLSW--NRHVLSSGSRSGAIHHHDVRIANHQ---------------------------IGTLQGHSSEVCGLAWRSDGLQ  231 (401)
T ss_dssp             EEEE--ETTEEEEEETTSEEEEEETTSSSCE---------------------------EEEEECCSSCEEEEEECTTSSE
T ss_pred             EEEE--CCCEEEEEcCCCCEEEEecccCcce---------------------------eeEEcCCCCCeeEEEEcCCCCE
Confidence            9999  4679999999999999999853321                           11223589999999998  779


Q ss_pred             EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc--CCCcEEEEEcCCCCCCc
Q psy10348        185 VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN--QSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~  262 (291)
                      |++++.|+.|++||+++...            +..+..+...+..++++++ ...++++|+  .||.|++||+.+++.  
T Consensus       232 l~s~~~d~~v~iwd~~~~~~------------~~~~~~~~~~v~~~~~~p~-~~~ll~~~~gs~d~~i~i~d~~~~~~--  296 (401)
T 4aez_A          232 LASGGNDNVVQIWDARSSIP------------KFTKTNHNAAVKAVAWCPW-QSNLLATGGGTMDKQIHFWNAATGAR--  296 (401)
T ss_dssp             EEEEETTSCEEEEETTCSSE------------EEEECCCSSCCCEEEECTT-STTEEEEECCTTTCEEEEEETTTCCE--
T ss_pred             EEEEeCCCeEEEccCCCCCc------------cEEecCCcceEEEEEECCC-CCCEEEEecCCCCCEEEEEECCCCCE--
Confidence            99999999999999988643            6677778888877766643 235666655  799999999998753  


Q ss_pred             ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        263 IKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                        ...+.   +...|.+++|+|++++|++
T Consensus       297 --~~~~~---~~~~v~~~~~s~~~~~l~~  320 (401)
T 4aez_A          297 --VNTVD---AGSQVTSLIWSPHSKEIMS  320 (401)
T ss_dssp             --EEEEE---CSSCEEEEEECSSSSEEEE
T ss_pred             --EEEEe---CCCcEEEEEECCCCCeEEE
Confidence              23332   4568999999999999874

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-32  Score=212.71  Aligned_cols=223  Identities=15%  Similarity=0.207  Sum_probs=183.0

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ...|...|.+++|+|++    .+|++++.||.|++|++...   +.+..+.+|...|.+++|.+   .++++++.||.|+
T Consensus        55 ~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~d~~i~  127 (313)
T 3odt_A           55 VYTGQGFLNSVCYDSEK----ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQD---GVVISGSWDKTAK  127 (313)
T ss_dssp             EEECSSCEEEEEEETTT----TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEET---TEEEEEETTSEEE
T ss_pred             eecCCccEEEEEECCCC----CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecC---CEEEEEeCCCCEE
Confidence            34578999999999998    59999999999999998654   56778889999999999953   6999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      +||  .++....+   ..|...+.+++|.| ++.++++++.||.|++||.....  ..+.                    
T Consensus       128 ~~d--~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~--------------------  180 (313)
T 3odt_A          128 VWK--EGSLVYNL---QAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVI--KTFS--------------------  180 (313)
T ss_dssp             EEE--TTEEEEEE---ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEE--EEEC--------------------
T ss_pred             EEc--CCcEEEec---ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceE--EEEe--------------------
Confidence            999  56666666   68999999999998 89999999999999999943221  1111                    


Q ss_pred             CcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                             ..|...+.+++|+ ...+++++.|+.|++||+++.+.            +..+..|...+..++++  |++ .
T Consensus       181 -------~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~------------~~~~~~~~~~i~~~~~~--~~~-~  238 (313)
T 3odt_A          181 -------GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV------------LRTYEGHESFVYCIKLL--PNG-D  238 (313)
T ss_dssp             -------SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE------------EEEEECCSSCEEEEEEC--TTS-C
T ss_pred             -------ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh------------hhhhhcCCceEEEEEEe--cCC-C
Confidence                   1278889999998 44599999999999999988744            77788888888876665  557 5


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      |++++.||.|++||+.+++.    ...+  ..|..+|.+++|+|++++++
T Consensus       239 l~~~~~dg~v~iwd~~~~~~----~~~~--~~~~~~i~~~~~~~~~~~~~  282 (313)
T 3odt_A          239 IVSCGEDRTVRIWSKENGSL----KQVI--TLPAISIWSVDCMSNGDIIV  282 (313)
T ss_dssp             EEEEETTSEEEEECTTTCCE----EEEE--ECSSSCEEEEEECTTSCEEE
T ss_pred             EEEEecCCEEEEEECCCCce----eEEE--eccCceEEEEEEccCCCEEE
Confidence            88999999999999998852    2333  35678999999999999665

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-33  Score=228.22  Aligned_cols=236  Identities=11%  Similarity=0.038  Sum_probs=178.1

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc-----ceeEEEEecCCCcEEEEeecCC
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH-----AINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      +.+.|.+.|.+++|||++    .+||+++.||.|++||.+.  ++..+. |..     .|.+++|+| ++++||+|+.||
T Consensus        80 ~~~~~~~~V~~vawSPdG----~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DG  151 (588)
T 2j04_A           80 LNSQPVCYPRVCKPSPID----DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDG  151 (588)
T ss_dssp             STTSCSCCEEEEEECSSS----SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTS
T ss_pred             eecCCCCcEEEEEECCCC----CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCC
Confidence            344568899999999999    5999999999999999654  666666 665     499999999 999999999999


Q ss_pred             eEEEEECCCcce-------eeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh---hhhccccccCC
Q psy10348         80 TLRLWNIKTDIC-------IAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK---DACAESYTFNP  148 (291)
Q Consensus        80 ~i~vwd~~~~~~-------~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~~  148 (291)
                      +|++||+.++..       +..+. ...+|...|.+++|+|+|  +++++.|++|++||+..+...   .++.       
T Consensus       152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-------  222 (588)
T 2j04_A          152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-------  222 (588)
T ss_dssp             EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-------
T ss_pred             EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-------
Confidence            999999998753       34431 115688999999999999  888899999999999877632   1111       


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                          .+|...|.+++|+++.+++++ +++|++||+...+.            .....+|...+.
T Consensus       223 --------------------~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~------------~~~~~gh~~~V~  269 (588)
T 2j04_A          223 --------------------NASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSI------------SSLKTGSLENFH  269 (588)
T ss_dssp             --------------------CCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEE------------EEEECSCCSCCC
T ss_pred             --------------------ccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeE------------EEEEcCCCceEE
Confidence                                247888999999988999887 79999999987643            222226888888


Q ss_pred             EEEEEecCCCcEEEEEcCCCcEEEEEcCCC-----CCCc----cee-------EEEeccccccceeeeEEccCCceeeC
Q psy10348        229 FIRFSMDYWQKILAVGNQSGRTYVWDLDVQ-----DPSS----IKF-------QILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-----~~~~----~~~-------~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+.+--+|++..|++++.||+ ++|....-     ..+.    ...       ..+....+...|.+++|||||+.||+
T Consensus       270 ~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~  347 (588)
T 2j04_A          270 IIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAI  347 (588)
T ss_dssp             EEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEE
T ss_pred             EEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEE
Confidence            776611577999999999999 99997421     0000    000       00111122456899999999999874

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-32  Score=225.71  Aligned_cols=233  Identities=12%  Similarity=0.048  Sum_probs=183.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeee------------------------------
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGH------------------------------   55 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~------------------------------   55 (291)
                      ...++.+++|+|++    ++|+++ .++.|++||+.+++   .+..+..+                              
T Consensus         3 ~~~p~~~v~~s~dg----~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (450)
T 2vdu_B            3 VIHPLQNLLTSRDG----SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLK   77 (450)
T ss_dssp             EECCCCEEEECSSS----SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------
T ss_pred             ccccEEEEEecCCC----CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccc
Confidence            34688999999999    466655 57899999999998   66555432                              


Q ss_pred             ------------------------ccceeEEEEecCCCcEE-EEeecCCeEEEEECC--CcceeeeeccccCCCCceEEE
Q psy10348         56 ------------------------GHAINELKFHPQDFNLL-LSVSKDHTLRLWNIK--TDICIAIFGGVEGHRDEVLSA  108 (291)
Q Consensus        56 ------------------------~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~i~~~  108 (291)
                                              .+.|.+++|+| ++.+| ++|+.||.|++||+.  +++.+..+.. ..|...|.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~  155 (450)
T 2vdu_B           78 SNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAI  155 (450)
T ss_dssp             ----------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-EECSSCEEEE
T ss_pred             cCcCccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeec-ccCCCCceEE
Confidence                                    23699999999 78885 899999999999999  8888777621 2567899999


Q ss_pred             EEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCC-----
Q psy10348        109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD-----  183 (291)
Q Consensus       109 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----  183 (291)
                      +|+|++++|++++.||.+++|++.+++....                        ....+.+|...|.+++|+++     
T Consensus       156 ~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~------------------------~~~~~~~h~~~v~~~~~sp~~~~~~  211 (450)
T 2vdu_B          156 SIAEDDTTVIIADKFGDVYSIDINSIPEEKF------------------------TQEPILGHVSMLTDVHLIKDSDGHQ  211 (450)
T ss_dssp             EECTTSSEEEEEETTSEEEEEETTSCCCSSC------------------------CCCCSEECSSCEEEEEEEECTTSCE
T ss_pred             EEcCCCCEEEEEeCCCcEEEEecCCcccccc------------------------cceeeecccCceEEEEEcCCCCCCc
Confidence            9999999999999999999999987764320                        01122458899999999833     


Q ss_pred             EEEEecCCCeEEEecCCCCCccccccCCCceeeeee-ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        184 FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR-LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                      +|++++.|+.|++||+++...            +.. +.+|...+..++|+   ++++|++|+.|+.|++||+.+++.+ 
T Consensus       212 ~l~s~~~d~~i~vwd~~~~~~------------~~~~~~~h~~~v~~~~~s---d~~~l~s~~~d~~v~vwd~~~~~~~-  275 (450)
T 2vdu_B          212 FIITSDRDEHIKISHYPQCFI------------VDKWLFGHKHFVSSICCG---KDYLLLSAGGDDKIFAWDWKTGKNL-  275 (450)
T ss_dssp             EEEEEETTSCEEEEEESCTTC------------EEEECCCCSSCEEEEEEC---STTEEEEEESSSEEEEEETTTCCEE-
T ss_pred             EEEEEcCCCcEEEEECCCCce------------eeeeecCCCCceEEEEEC---CCCEEEEEeCCCeEEEEECCCCcEe-
Confidence            999999999999999987754            444 55788888887776   5999999999999999999998643 


Q ss_pred             ceeEEEecc-----------------------ccccceeeeEEccCCceeeC
Q psy10348        263 IKFQILSHP-----------------------RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       263 ~~~~~~~~~-----------------------~~~~~v~~~~~s~~g~~l~s  291 (291)
                         ..+...                       .....|.+++|+|++++|++
T Consensus       276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~  324 (450)
T 2vdu_B          276 ---STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF  324 (450)
T ss_dssp             ---EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred             ---eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence               222210                       23457899999999999874

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.2e-31  Score=211.76  Aligned_cols=233  Identities=19%  Similarity=0.236  Sum_probs=185.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|.+++|+|++    .+|++++.|+.|++|+............+...+..+.+++ ++.+|++++.|+.+++||+.
T Consensus        84 ~h~~~V~~~~~s~dg----~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~  158 (340)
T 4aow_A           84 GHSHFVSDVVISSDG----QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTL  158 (340)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTT
T ss_pred             CCCCCEEEEEECCCC----CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeC
Confidence            478999999999998    5999999999999999999988888888889999999999 88999999999999999998


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCC--CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLG--TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ........  ..+|...+..++|++++  .++++++.|+.|++||+++++....+                         
T Consensus       159 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~-------------------------  211 (340)
T 4aow_A          159 GVCKYTVQ--DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH-------------------------  211 (340)
T ss_dssp             SCEEEEEC--SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE-------------------------
T ss_pred             CCceEEEE--eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe-------------------------
Confidence            65544332  26899999999998875  47889999999999999988765443                         


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                         .+|...|.+++|+  +++|++++.|+.|++||+++.+.            +..+..+. .+..+.  ++|++.+ ++
T Consensus       212 ---~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~------------~~~~~~~~-~v~~~~--~~~~~~~-~~  272 (340)
T 4aow_A          212 ---IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH------------LYTLDGGD-IINALC--FSPNRYW-LC  272 (340)
T ss_dssp             ---CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE------------EEEEECSS-CEEEEE--ECSSSSE-EE
T ss_pred             ---cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce------------eeeecCCc-eEEeee--cCCCCce-ee
Confidence               3488999999998  77999999999999999988743            55555443 455544  4565655 55


Q ss_pred             EcCCCcEEEEEcCCCCCCcce---eEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIK---FQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++.|+.|++||++++......   .......+|...|++++|+|||++|++
T Consensus       273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s  323 (340)
T 4aow_A          273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA  323 (340)
T ss_dssp             EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEE
T ss_pred             ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE
Confidence            667999999999876432111   111223468889999999999999985

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.6e-34  Score=227.05  Aligned_cols=219  Identities=8%  Similarity=0.078  Sum_probs=162.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .|...|++++|+|++    ++|++++.||.|++||+.+++   ....+..|...|.+++|+| ++++|++++.|+.|++|
T Consensus        53 ~h~~~v~~~~~s~~~----~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw  127 (377)
T 3dwl_C           53 DHDKIVTCVDWAPKS----NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVC  127 (377)
T ss_dssp             CCSSCEEEEEECTTT----CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEEC
T ss_pred             cCCceEEEEEEeCCC----CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEE
Confidence            478999999999998    499999999999999999877   5667778999999999999 89999999999999999


Q ss_pred             ECCCcce---eeeeccccC-CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         85 NIKTDIC---IAIFGGVEG-HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        85 d~~~~~~---~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      |+++++.   ...+   .. |...|.+++|+|++++|++++.|+.|++||++..........          .++.....
T Consensus       128 d~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------~~~~~~~~  194 (377)
T 3dwl_C          128 YFEQENDWWVSKHL---KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEA----------SVWGSRLP  194 (377)
T ss_dssp             CC-----CCCCEEE---CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCS----------CSSCSCCC
T ss_pred             EECCcccceeeeEe---ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccc----------cccccccc
Confidence            9998774   4555   55 999999999999999999999999999999976543221110          00000000


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                      ........ .|...|.+++|+  +++|++++.|+.|++||+++.+..        ...+..+..|...+..++|+++  +
T Consensus       195 ~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~--~  263 (377)
T 3dwl_C          195 FNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP--------PRALITVKLSQLPLRSLLWANE--S  263 (377)
T ss_dssp             EEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC--------EEECCCEECSSSCEEEEEEEET--T
T ss_pred             hhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc--------ceeeEeecCCCCceEEEEEcCC--C
Confidence            01112222 689999999998  779999999999999999887541        1225667788888888777754  9


Q ss_pred             cEEEEEcCCCcEEEEEcC
Q psy10348        239 KILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~  256 (291)
                      ++|++|+.++.+ +|+..
T Consensus       264 ~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          264 AIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             EEEEEESSSSEE-EECCC
T ss_pred             CEEEEEcCCcEE-EEEeC
Confidence            999999877665 66665

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=9.7e-32  Score=220.06  Aligned_cols=248  Identities=20%  Similarity=0.320  Sum_probs=199.6

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      +.-..+..+.++.++.  +    +|++|+.||.|++||+.+++.+..+.+|.+.|.+++|++   .++++|+.||.|++|
T Consensus       114 l~~h~~~v~~~~~~~g--~----~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vw  184 (445)
T 2ovr_B          114 LKGHDDHVITCLQFCG--N----RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVW  184 (445)
T ss_dssp             EECSTTSCEEEEEEET--T----EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEE
T ss_pred             ecccCCCcEEEEEEcC--C----EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEE
Confidence            4456777888999994  3    899999999999999999999999999999999999999   499999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc------cccCCC--------C
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES------YTFNPA--------R  150 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~~~~--------~  150 (291)
                      |+.+++.+..+   .+|...|.++.|+  ++.+++|+.||.|++||+++++....+..+      +.+...        +
T Consensus       185 d~~~~~~~~~~---~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  259 (445)
T 2ovr_B          185 NAETGECIHTL---YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF  259 (445)
T ss_dssp             ETTTTEEEEEE---CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTS
T ss_pred             ECCcCcEEEEE---CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCC
Confidence            99999999999   7999999999996  678999999999999999998887766532      222111        1


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                      ....++..  .........+|...|.++.|++.++++++.|+.|++||+++++.            +..+..+...+..+
T Consensus       260 ~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~~~~~~~~~~v~~~  325 (445)
T 2ovr_B          260 MVKVWDPE--TETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC------------IHTLTGHQSLTSGM  325 (445)
T ss_dssp             CEEEEEGG--GTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCE------------EEEECCCCSCEEEE
T ss_pred             EEEEEECC--CCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCE------------EEEEcCCcccEEEE
Confidence            11111111  11233445679999999999999999999999999999988744            67777887776655


Q ss_pred             EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEccCCceee
Q psy10348        231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+  +  +.++++|+.||.|++||+.+++.    ...+. ...|...|.+++|+  +++|+
T Consensus       326 ~~--~--~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~--~~~l~  376 (445)
T 2ovr_B          326 EL--K--DNILVSGNADSTVKIWDIKTGQC----LQTLQGPNKHQSAVTCLQFN--KNFVI  376 (445)
T ss_dssp             EE--E--TTEEEEEETTSCEEEEETTTCCE----EEEECSTTSCSSCEEEEEEC--SSEEE
T ss_pred             EE--e--CCEEEEEeCCCeEEEEECCCCcE----EEEEccCCCCCCCEEEEEEC--CCEEE
Confidence            43  4  78999999999999999998753    23333 23488899999996  45655

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=2.1e-32  Score=216.27  Aligned_cols=232  Identities=11%  Similarity=0.078  Sum_probs=183.5

Q ss_pred             eeeeecceeEEEEeeeccCCCCC-EEEEecCCCeEEEEcc-CCcceeEEEee--eccceeEEEEecCCCcEEEEeecCCe
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRP-LLAVAGSRAVIRIFSP-AFHACVRHFYG--HGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~-~l~~~~~dg~i~vw~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      ....|...|.+++|+|++    . +|++|+.||.|++||+ ++++. ..+.+  |...|.+++|+|  +.+|++++.|+.
T Consensus        51 ~~~~~~~~v~~~~~~~~~----~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~  123 (342)
T 1yfq_A           51 QSLRYKHPLLCCNFIDNT----DLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGL  123 (342)
T ss_dssp             EEEECSSCEEEEEEEESS----SEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred             eeeecCCceEEEEECCCC----CcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence            345788999999999997    7 8999999999999999 77654 67778  999999999998  689999999999


Q ss_pred             EEEEECCC---------cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCC
Q psy10348         81 LRLWNIKT---------DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPAR  150 (291)
Q Consensus        81 i~vwd~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~  150 (291)
                      |++||+++         ++.+..+    .|...|.+++|+|++  +++++.|+.|++||+++ +......          
T Consensus       124 i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~----------  187 (342)
T 1yfq_A          124 IEVIDPRNYGDGVIAVKNLNSNNT----KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTI----------  187 (342)
T ss_dssp             EEEECHHHHTTBCEEEEESCSSSS----SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEE----------
T ss_pred             EEEEcccccccccccccCCeeeEE----eeCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccccee----------
Confidence            99999987         6666665    488999999999887  99999999999999987 5421110          


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc--
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC--  225 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--  225 (291)
                                      ....|...+.+++|+   ++++++++.||.|++|+++......      .......+..+..  
T Consensus       188 ----------------~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~------~~~~~~~~~~~~~~~  245 (342)
T 1yfq_A          188 ----------------EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY------NSSKRFAFRCHRLNL  245 (342)
T ss_dssp             ----------------EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST------TCTTCEEEECCCCCT
T ss_pred             ----------------eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc------ccccceeeecccccc
Confidence                            112377789999997   4699999999999999997751000      0011444555543  


Q ss_pred             -------cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc-ccceeeeEEccCCceeeC
Q psy10348        226 -------EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC-MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       226 -------~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~s  291 (291)
                             .+..++  ++|++++|++|+.||.|++||+.+++.      .....+| ..+|.+++  |+|++|++
T Consensus       246 ~~~~~~~~i~~~~--~s~~~~~l~~~~~dg~i~vwd~~~~~~------~~~~~~~h~~~v~~~~--~~~~~l~s  309 (342)
T 1yfq_A          246 KDTNLAYPVNSIE--FSPRHKFLYTAGSDGIISCWNLQTRKK------IKNFAKFNEDSVVKIA--CSDNILCL  309 (342)
T ss_dssp             TCCSSCCCEEEEE--ECTTTCCEEEEETTSCEEEEETTTTEE------EEECCCCSSSEEEEEE--ECSSEEEE
T ss_pred             cccccceeEEEEE--EcCCCCEEEEecCCceEEEEcCccHhH------hhhhhcccCCCceEec--CCCCeEEE
Confidence                   666554  557799999999999999999998742      2234466 88999999  99999874

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-33  Score=220.36  Aligned_cols=213  Identities=7%  Similarity=-0.047  Sum_probs=165.7

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC---------Ccceeeeecc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK---------TDICIAIFGG   97 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~---------~~~~~~~~~~   97 (291)
                      .++++|+.||.|++||+++++.+..+.  ...|.++.|+| +   +++++.|++|++|+..         +++.+..+. 
T Consensus        49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~-  121 (343)
T 3lrv_A           49 WVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE-  121 (343)
T ss_dssp             EEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE-
T ss_pred             CEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEee-
Confidence            599999999999999999999888886  57789999999 5   9999999999999765         444344432 


Q ss_pred             ccCCCCceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcce
Q psy10348         98 VEGHRDEVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV  175 (291)
Q Consensus        98 ~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  175 (291)
                       .+|..+|.+++|+|  ++++|++++.||.|++||+++++......                           ..|...+
T Consensus       122 -~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~---------------------------~~~~~~i  173 (343)
T 3lrv_A          122 -VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS---------------------------AKSDVEY  173 (343)
T ss_dssp             -CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC---------------------------CCSSCCC
T ss_pred             -cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---------------------------cCCCCce
Confidence             36778999999999  99999999999999999999887543221                           1255679


Q ss_pred             eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEE
Q psy10348        176 DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYV  252 (291)
Q Consensus       176 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~v  252 (291)
                      .+++|+  +.+|++|+.|+.|++||+++++..           ...+.. |...|..++|+  |++.+|++++ |+.|++
T Consensus       174 ~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~-----------~~~~~~~h~~~v~~l~fs--~~g~~l~s~~-~~~v~i  239 (343)
T 3lrv_A          174 SSGVLHKDSLLLALYSPDGILDVYNLSSPDQA-----------SSRFPVDEEAKIKEVKFA--DNGYWMVVEC-DQTVVC  239 (343)
T ss_dssp             CEEEECTTSCEEEEECTTSCEEEEESSCTTSC-----------CEECCCCTTSCEEEEEEC--TTSSEEEEEE-SSBEEE
T ss_pred             EEEEECCCCCEEEEEcCCCEEEEEECCCCCCC-----------ccEEeccCCCCEEEEEEe--CCCCEEEEEe-CCeEEE
Confidence            999998  779999999999999999987541           256666 78888776665  6699999999 559999


Q ss_pred             EEcCCCCCCcceeEEEecccccccee--eeEEccCCceeeC
Q psy10348        253 WDLDVQDPSSIKFQILSHPRCMSAVR--QTTLSKNGNVLLC  291 (291)
Q Consensus       253 wd~~~~~~~~~~~~~~~~~~~~~~v~--~~~~s~~g~~l~s  291 (291)
                      ||+++.+.......   ...|...+.  +++|+|+|++|++
T Consensus       240 wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~  277 (343)
T 3lrv_A          240 FDLRKDVGTLAYPT---YTIPEFKTGTVTYDIDDSGKNMIA  277 (343)
T ss_dssp             EETTSSTTCBSSCC---CBC-----CCEEEEECTTSSEEEE
T ss_pred             EEcCCCCcceeecc---cccccccccceEEEECCCCCEEEE
Confidence            99999865432211   112333444  6999999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-33  Score=243.75  Aligned_cols=127  Identities=13%  Similarity=0.159  Sum_probs=107.5

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-----------EEEeeeccceeEEEEecCCCcEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-----------RHFYGHGHAINELKFHPQDFNLLLS   74 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~~l~s   74 (291)
                      .+.|.+.|++++|+|++    .+|++|+.||.|++||+++++..           ..+.+|.++|.+++|+|.++..|++
T Consensus        94 ~~~~~~~V~~v~~sp~g----~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~  169 (902)
T 2oaj_A           94 TVFVPGKITSIDTDASL----DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI  169 (902)
T ss_dssp             EEECSSCEEEEECCTTC----SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred             EEcCCCCEEEEEECCCC----CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence            34577899999999998    49999999999999999987753           2235688999999999955689999


Q ss_pred             eecCCeEEEEECCCcceeeeeccc---------------cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348         75 VSKDHTLRLWNIKTDICIAIFGGV---------------EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK  137 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~~~~~~~~---------------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~  137 (291)
                      |+.||.| +||+++++.+..+...               ..|...|.+++|+|+|++|++++.||.|++||+++++.+
T Consensus       170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~  246 (902)
T 2oaj_A          170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI  246 (902)
T ss_dssp             ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred             EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence            9999999 9999999888776211               123578999999999999999999999999999887654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=1e-32  Score=211.16  Aligned_cols=210  Identities=12%  Similarity=0.039  Sum_probs=152.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEec--------------------CCCeEEEEcc-CCcceeEEEeeeccceeEEEEec--
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAG--------------------SRAVIRIFSP-AFHACVRHFYGHGHAINELKFHP--   66 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~--------------------~dg~i~vw~~-~~~~~~~~~~~~~~~v~~~~~~~--   66 (291)
                      ...|++++++|++..-++.+++++                    .|+.|++|++ .+++.+..+.+|...+..++|++  
T Consensus       111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~  190 (356)
T 2w18_A          111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ  190 (356)
T ss_dssp             EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred             ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence            457888888888322234666644                    3889999998 45888888888888888888887  


Q ss_pred             CCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEE------------EEEecCCcEEEEeccCc
Q psy10348         67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKI------------MSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l------------~~~~~d~~i~v~d~~~~  134 (291)
                      .++.+|++|+.|++|+|||+++|+++..+..-..+...+.+++|+|+|.++            ++|+.|++|++||..++
T Consensus       191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg  270 (356)
T 2w18_A          191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT  270 (356)
T ss_dssp             TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred             CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence            356899999999999999999999999983111123468888999999876            56788999999999988


Q ss_pred             hhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCce
Q psy10348        135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNV  214 (291)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  214 (291)
                      +.+..+...  +                     .++|...+.+..+++.++++++.|++|++||+.+++.          
T Consensus       271 k~l~v~~~~--~---------------------p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~----------  317 (356)
T 2w18_A          271 LSVGVMLYC--L---------------------PPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQC----------  317 (356)
T ss_dssp             EEEEEEEEC--C---------------------CTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSE----------
T ss_pred             EEEEEEEee--c---------------------cCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcE----------
Confidence            865432110  0                     1235555556666688999999999999999999855          


Q ss_pred             eeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        215 TIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       215 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                        +.++.+|...+.. .++++|||++|++|+.|++|+|||+
T Consensus       318 --l~tL~gH~~~vvs-~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          318 --TALLPPVSDQHWS-FVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             --EEEECCC--CCCC-EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             --EEEecCCCCCeEE-EEEECCCCCEEEEEECCCcEEEecC
Confidence              7888877665442 2355677999999999999999996

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-32  Score=223.73  Aligned_cols=225  Identities=12%  Similarity=0.153  Sum_probs=172.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----------------------------eeEEEe-eeccce
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----------------------------CVRHFY-GHGHAI   59 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----------------------------~~~~~~-~~~~~v   59 (291)
                      ...|.+++|+||+    +++|+++.|++|+  |.+.++                             ....+. .|...|
T Consensus        15 ~~~v~sv~~SpDG----~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V   88 (588)
T 2j04_A           15 EDWKNNLTWARDG----TLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYP   88 (588)
T ss_dssp             SSSSCCEEECTTS----CEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCE
T ss_pred             hccEEEEEECCCC----CEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcE
Confidence            5889999999999    5999999999995  333222                             111122 457889


Q ss_pred             eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCC-----ceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348         60 NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD-----EVLSADFDLLGTKIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        60 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~  134 (291)
                      .+++|+| +|.+||+++.||.|++||.+.  .+..+   . |..     .+.+++|+|+|++|++|+.||+|++||+.++
T Consensus        89 ~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l---~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~  161 (588)
T 2j04_A           89 RVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNL---D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN  161 (588)
T ss_dssp             EEEEECS-SSSCEEEEETTSCEEEEETTE--EEEEC---C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred             EEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeec---c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence            9999999 999999999999999999543  55554   4 554     5999999999999999999999999999987


Q ss_pred             hhh-------hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcccc
Q psy10348        135 EIK-------DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKEL  207 (291)
Q Consensus       135 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  207 (291)
                      ...       .++..                        ...+|...|.+++|+++-+++++.|++|++||+......  
T Consensus       162 ~l~~~~~i~l~ti~~------------------------~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~--  215 (588)
T 2j04_A          162 SENTPEFYFESSIRL------------------------SDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQ--  215 (588)
T ss_dssp             TTTCCCCEEEEEEEC------------------------SCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSC--
T ss_pred             ccccccceeeeeeec------------------------ccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccc--
Confidence            531       11110                        013488899999999333889999999999999876531  


Q ss_pred             ccCCCceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE--cc
Q psy10348        208 RTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL--SK  284 (291)
Q Consensus       208 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~  284 (291)
                             ....++ .+|...|..++|+    +++||+++ ++.|++||+.+++.     ..+.. +|...|.+++|  +|
T Consensus       216 -------~~~~tL~~~h~~~V~svaFs----g~~LASa~-~~tIkLWd~~~~~~-----~~~~~-gh~~~V~~va~~~s~  277 (588)
T 2j04_A          216 -------PVSRMIQNASRRKITDLKIV----DYKVVLTC-PGYVHKIDLKNYSI-----SSLKT-GSLENFHIIPLNHEK  277 (588)
T ss_dssp             -------CCEEEEECCCSSCCCCEEEE----TTEEEEEC-SSEEEEEETTTTEE-----EEEEC-SCCSCCCEEEETTCS
T ss_pred             -------cceeeecccccCcEEEEEEE----CCEEEEEe-CCeEEEEECCCCeE-----EEEEc-CCCceEEEEEeeeCC
Confidence                   113445 3677778877776    58999997 69999999998731     23332 68999999999  99


Q ss_pred             CCceeeC
Q psy10348        285 NGNVLLC  291 (291)
Q Consensus       285 ~g~~l~s  291 (291)
                      |++.|++
T Consensus       278 d~~~La~  284 (588)
T 2j04_A          278 ESTILLM  284 (588)
T ss_dssp             SCEEEEE
T ss_pred             CCCEEEE
Confidence            9988763

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=3.8e-32  Score=230.91  Aligned_cols=227  Identities=9%  Similarity=0.089  Sum_probs=188.6

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccc-eeEEEEecC-CCcEEEEeecCCe
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHA-INELKFHPQ-DFNLLLSVSKDHT   80 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~-v~~~~~~~~-~~~~l~s~~~dg~   80 (291)
                      ..|.+.|.+++|+|++    ++|++++ ++.|++||++++    +....+.+|... |.+++|+|. ++++|++|+.||.
T Consensus        15 ~~~~~~v~~~~~spdg----~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~   89 (615)
T 1pgu_A           15 STQRNFTTHLSYDPTT----NAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK   89 (615)
T ss_dssp             CCCTTCCCCCEEETTT----TEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred             CCccCceeEEEECCCC----CEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCE
Confidence            3578999999999999    4899888 789999999999    889999999999 999999983 5689999999999


Q ss_pred             EEEEECCCc--------ceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCC
Q psy10348         81 LRLWNIKTD--------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        81 i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      |++||+.++        +....+   ..|...|.+++|+|++++|++++.+    +.|++||.  ++....         
T Consensus        90 v~vw~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~~~---------  155 (615)
T 1pgu_A           90 VIVWGWTFDKESNSVEVNVKSEF---QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSLGE---------  155 (615)
T ss_dssp             EEEEEEEEEGGGTEEEEEEEEEE---ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEEEE---------
T ss_pred             EEEEeCCCCcccccccccccchh---hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCccee---------
Confidence            999999755        455555   6899999999999999999999987    68999983  332222         


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                                         ..+|...|.+++|+  ++ ++++++.|+.|++||+.+.+            .+..+..|..
T Consensus       156 -------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~------------~~~~~~~~~~  204 (615)
T 1pgu_A          156 -------------------VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK------------FSASDRTHHK  204 (615)
T ss_dssp             -------------------CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE------------EEEEECSSSC
T ss_pred             -------------------eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc------------eeeeecccCC
Confidence                               23488999999999  43 89999999999999988763            3677777777


Q ss_pred             ---cEEEEEEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc---ccccceeeeEEccCCceeeC
Q psy10348        226 ---EIWFIRFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP---RCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       226 ---~i~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~s  291 (291)
                         .+..++  ++|+ +++|++++.||.|++||+.+++.    ...+. .   .|...|.+++|+ ++++|++
T Consensus       205 ~~~~v~~~~--~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~-~~~~~~~~~v~~~~~~-~~~~l~~  269 (615)
T 1pgu_A          205 QGSFVRDVE--FSPDSGEFVITVGSDRKISCFDGKSGEF----LKYIE-DDQEPVQGGIFALSWL-DSQKFAT  269 (615)
T ss_dssp             TTCCEEEEE--ECSTTCCEEEEEETTCCEEEEETTTCCE----EEECC-BTTBCCCSCEEEEEES-SSSEEEE
T ss_pred             CCceEEEEE--ECCCCCCEEEEEeCCCeEEEEECCCCCE----eEEec-ccccccCCceEEEEEc-CCCEEEE
Confidence               776655  5588 99999999999999999998752    12221 2   688899999999 9988874

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.2e-32  Score=251.02  Aligned_cols=233  Identities=19%  Similarity=0.272  Sum_probs=197.3

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..+...+.+++|+|++    .++++|+.+|.|++|++.+++....+.+|...|.+++|+| ++++|++++.||.|++||+
T Consensus       958 ~~~~~~i~~~~~sp~g----~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A          958 YLPEAQVSCCCLSPHL----EYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp             EECCSCEEEEEECTTS----SEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEET
T ss_pred             EcccCcEEEEEEcCCC----CEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEEC
Confidence            3456789999999998    4999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .+++....    ..|...|.++.|+|++ .+++++.||.|++||+.+++....+                          
T Consensus      1033 ~~~~~~~~----~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~-------------------------- 1081 (1249)
T 3sfz_A         1033 QTGDYVFL----QAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDF-------------------------- 1081 (1249)
T ss_dssp             TTTEEECC----BCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEE--------------------------
T ss_pred             CCCceEEE----ecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEE--------------------------
Confidence            98877654    5899999999999965 6788999999999999988765444                          


Q ss_pred             cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        .+|...|.+++|+  ++++++++.|++|++||+.+...            +..+.+|...|..++++  |++++|++|
T Consensus      1082 --~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~------------~~~l~~h~~~v~~~~~s--~dg~~lat~ 1145 (1249)
T 3sfz_A         1082 --TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP------------LHELKGHNGCVRCSAFS--LDGILLATG 1145 (1249)
T ss_dssp             --ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC------------SBCCCCCSSCEEEEEEC--SSSSEEEEE
T ss_pred             --cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce------------eeeeccCCCcEEEEEEC--CCCCEEEEE
Confidence              3488899999998  77999999999999999988754            66777888888776655  669999999


Q ss_pred             cCCCcEEEEEcCCCCCCcceeE---EEeccccccceeeeEEccCCceeeC
Q psy10348        245 NQSGRTYVWDLDVQDPSSIKFQ---ILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +.||.|++||+.+++.......   ......|.+.|++++|+|||++|++
T Consensus      1146 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s 1195 (1249)
T 3sfz_A         1146 DDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVS 1195 (1249)
T ss_dssp             ETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEE
T ss_pred             eCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEE
Confidence            9999999999999876543211   1112367889999999999999874

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-31  Score=214.47  Aligned_cols=211  Identities=18%  Similarity=0.247  Sum_probs=169.5

Q ss_pred             eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348          8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i   81 (291)
                      .|...|++++|+++  +    .+|++|+.||.|++||+.+++  .+..+..|...|.+++|+| +  +.+|++++.||.|
T Consensus        53 ~h~~~v~~~~~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i  127 (379)
T 3jrp_A           53 GHEGPVWRVDWAHPKFG----TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKV  127 (379)
T ss_dssp             CCSSCEEEEEECCGGGC----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEE
T ss_pred             CCCCcEEEEEeCCCCCC----CEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcE
Confidence            47899999999987  5    599999999999999999887  6777888999999999999 6  8999999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEcc-------------CCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDL-------------LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      ++||+..+.....+ .+..|...|.+++|+|             ++.+|++++.||.|++||++++.....+        
T Consensus       128 ~v~d~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------  198 (379)
T 3jrp_A          128 SVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL--------  198 (379)
T ss_dssp             EEEECCTTSCCCEE-EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE--------
T ss_pred             EEEecCCCCceeeE-EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee--------
Confidence            99999877433221 1268999999999999             6899999999999999999876533211        


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                                      .....+|...|.+++|+     +++|++++.|+.|++||++......       ...+.....+
T Consensus       199 ----------------~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-------~~~~~~~~~~  255 (379)
T 3jrp_A          199 ----------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-------KKTLLKEEKF  255 (379)
T ss_dssp             ----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC-------EEEESSSSCC
T ss_pred             ----------------EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc-------eeeeeccccC
Confidence                            12234589999999998     3589999999999999998764210       0112223335


Q ss_pred             cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ...+..++  ++|++++|++++.||.|++|++..
T Consensus       256 ~~~v~~~~--~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          256 PDVLWRAS--WSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             SSCEEEEE--ECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             CCcEEEEE--EcCCCCEEEEecCCCcEEEEeCCC
Confidence            66666555  456799999999999999999984

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.5e-30  Score=210.33  Aligned_cols=232  Identities=15%  Similarity=0.227  Sum_probs=179.5

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC--CCcEEEEeecCCeEEEEEC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ--DFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~   86 (291)
                      |...|.+++|+|+..   .+|++++.||.|++||+.+++.+..+. +...+.++.|+|.  ++.++++++.||.|++||+
T Consensus        98 ~~~~v~~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~  173 (408)
T 4a11_B           98 HRYSVETVQWYPHDT---GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL  173 (408)
T ss_dssp             CSSCEEEEEECTTCT---TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred             CCCcEEEEEEccCCC---cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence            889999999999433   599999999999999999999888776 7788999999983  2349999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchh-hhhhccccccCCCCccccccCccccCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEI-KDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ++++.+..+   ..|...|.+++|+|+++ .|++++.||.|++||++++.. ...+...             ........
T Consensus       174 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~~~~~~  237 (408)
T 4a11_B          174 KSGSCSHIL---QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH-------------NGKKSQAV  237 (408)
T ss_dssp             SSSCCCEEE---CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTT-------------TTCSCCCT
T ss_pred             CCcceeeee---cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccc-------------ccccceee
Confidence            999888888   78999999999999998 588999999999999987652 2111100             00000111


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC-------------------------------
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE-------------------------------  211 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------------------------  211 (291)
                      ......|...|.+++|+  +++|++++.|+.|++||+.+.+........                               
T Consensus       238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  317 (408)
T 4a11_B          238 ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIA  317 (408)
T ss_dssp             TTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEE
T ss_pred             ccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEE
Confidence            22234588999999998  779999999999999999876543211100                               


Q ss_pred             ----CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        212 ----TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       212 ----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                          .....+..+.+|...|..++++  |++++|++|+.||.|++||+.+.+.+.
T Consensus       318 v~d~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~s~~~dg~i~iw~~~~~~~~~  370 (408)
T 4a11_B          318 VYTVYSGEQITMLKGHYKTVDCCVFQ--SNFQELYSGSRDCNILAWVPSLYEPVP  370 (408)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEEE--TTTTEEEEEETTSCEEEEEECC-----
T ss_pred             EEECcCCcceeeeccCCCeEEEEEEc--CCCCEEEEECCCCeEEEEeCCCCCccC
Confidence                2234566777888888877666  669999999999999999999987543

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.8e-31  Score=211.14  Aligned_cols=220  Identities=11%  Similarity=0.195  Sum_probs=175.3

Q ss_pred             eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCc---------ceeEEEeeeccceeEEEEecCC--CcEEEE
Q psy10348          8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFH---------ACVRHFYGHGHAINELKFHPQD--FNLLLS   74 (291)
Q Consensus         8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~---------~~~~~~~~~~~~v~~~~~~~~~--~~~l~s   74 (291)
                      .|...|++++|+|.  +    .+|++|+.||.|++||++++         +.+..+..|...|.+++|+| +  +.+|++
T Consensus        55 ~~~~~v~~~~~~~~~d~----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~  129 (351)
T 3f3f_A           55 AHDSSIVAIDWASPEYG----RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLAC  129 (351)
T ss_dssp             CCSSCEEEEEECCGGGC----SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEE
T ss_pred             cCCCcEEEEEEcCCCCC----CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEE
Confidence            47899999999994  5    59999999999999999877         55778889999999999999 7  899999


Q ss_pred             eecCCeEEEEECCCcceeeeec----------cccCCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         75 VSKDHTLRLWNIKTDICIAIFG----------GVEGHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        75 ~~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      ++.||.|++||+++++.+..+.          ....|...+.+++|+|+   +.++++++.|+.+.+|+...++...   
T Consensus       130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---  206 (351)
T 3f3f_A          130 LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV---  206 (351)
T ss_dssp             EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE---
T ss_pred             ecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee---
Confidence            9999999999998876544331          01368889999999997   8999999999999888876654311   


Q ss_pred             cccccCCCCccccccCccccCcccccccccCcceeEEEEc--C----CEEEEecCCCeEEEecCCCCCcccccc------
Q psy10348        142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G----DFVLSKSCENCIICWKPGRLEDKELRT------  209 (291)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~----~~l~~~~~d~~i~iwd~~~~~~~~~~~------  209 (291)
                                             .....+|...|.+++|+  +    ++|++++.||.|++||++.........      
T Consensus       207 -----------------------~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  263 (351)
T 3f3f_A          207 -----------------------AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNS  263 (351)
T ss_dssp             -----------------------EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------
T ss_pred             -----------------------eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccce
Confidence                                   12234589999999998  4    689999999999999998653221000      


Q ss_pred             ----------------------------CCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        210 ----------------------------NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       210 ----------------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                                                  .......+..+.+|...|..++|+  |++++|++|+.||.|++|++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~~~dg~v~iw~~~~~~~  340 (351)
T 3f3f_A          264 NMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWN--LTGTILSSAGDDGKVRLWKATYSNE  340 (351)
T ss_dssp             ---------------------------CCSEEEEEEEEECTTSSCEEEEEEC--SSSCCEEEEETTSCEEEEEECTTSC
T ss_pred             eccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEc--CCCCEEEEecCCCcEEEEecCcCcc
Confidence                                        011225567788888888877665  6699999999999999999998764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-31  Score=210.99  Aligned_cols=192  Identities=10%  Similarity=0.163  Sum_probs=147.7

Q ss_pred             EEEecCCCeEEEEccC---------CcceeEEEe-eeccceeEEEEec-CCCcEEEEeecCCeEEEEECCCcceeeeecc
Q psy10348         29 LAVAGSRAVIRIFSPA---------FHACVRHFY-GHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNIKTDICIAIFGG   97 (291)
Q Consensus        29 l~~~~~dg~i~vw~~~---------~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~   97 (291)
                      +++++.|++|++|+..         +++.++.+. .|.++|.+++|+| .++.+|++++.||+|++||+++++...... 
T Consensus        88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~-  166 (343)
T 3lrv_A           88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS-  166 (343)
T ss_dssp             EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC-
T ss_pred             eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-
Confidence            8999999999999765         445454444 6678999999998 246899999999999999999998866552 


Q ss_pred             ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh-hhhccccccCCCCccccccCccccCcccccccc-cCcce
Q psy10348         98 VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK-DACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYV  175 (291)
Q Consensus        98 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v  175 (291)
                       ..+...|.+++|+|++.+|++|+.||.|++||+++++.. ..+                            .. |..+|
T Consensus       167 -~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~----------------------------~~~h~~~v  217 (343)
T 3lrv_A          167 -AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRF----------------------------PVDEEAKI  217 (343)
T ss_dssp             -CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEEC----------------------------CCCTTSCE
T ss_pred             -cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEE----------------------------eccCCCCE
Confidence             345668999999999999999999999999999988754 222                            23 88999


Q ss_pred             eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-CCcEEE
Q psy10348        176 DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-SGRTYV  252 (291)
Q Consensus       176 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg~i~v  252 (291)
                      .+++|+  +.+|++++ |+.|++||+++.+...         .+..+..+...+...+++++|++++|++++. |+.|++
T Consensus       218 ~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v  287 (343)
T 3lrv_A          218 KEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL---------AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTI  287 (343)
T ss_dssp             EEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB---------SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             EEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce---------eecccccccccccceEEEECCCCCEEEEecCCCCcEEE
Confidence            999998  67999999 5599999999875521         1111112222222234677888999999998 999999


Q ss_pred             EEcCCCCC
Q psy10348        253 WDLDVQDP  260 (291)
Q Consensus       253 wd~~~~~~  260 (291)
                      |++.....
T Consensus       288 ~~~~~~~~  295 (343)
T 3lrv_A          288 YKFDKKTK  295 (343)
T ss_dssp             EEECTTTC
T ss_pred             EEEccccc
Confidence            99976653

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.7e-31  Score=208.33  Aligned_cols=256  Identities=9%  Similarity=0.041  Sum_probs=179.1

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWN   85 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd   85 (291)
                      -.|.+.|++++|+|++    .+||+|+.++ +++|++++++......  ...+..+++.+ +++.+ ++++.|++|++||
T Consensus        16 ~~h~~~V~~v~fs~dg----~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd   87 (355)
T 3vu4_A           16 NHVSNPVTDYEFNQDQ----SCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLH-RTNYVAFVTGVKEVVHIWD   87 (355)
T ss_dssp             ---CCCCCEEEECTTS----SEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECT-TSSEEEEECSSTTEEEEEE
T ss_pred             ccCCCceEEEEECCCC----CEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcC-CCCEEEEEECCccEEEEEE
Confidence            3488999999999999    4999988775 7899998877655433  23588888988 55555 6788889999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc-hhhhhhcc----------cccc---CCCCc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP-EIKDACAE----------SYTF---NPARS  151 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~----------~~~~---~~~~~  151 (291)
                      +.+++.+..+    .+...|.+++|+++.  ++++ .|+.|++||+.++ +.+..+..          .+.+   ..++.
T Consensus        88 ~~~~~~~~~~----~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~  160 (355)
T 3vu4_A           88 DVKKQDVSRI----KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ  160 (355)
T ss_dssp             TTTTEEEEEE----ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred             CCCCcEEEEE----ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence            9999998887    467799999998764  4443 4788999999887 54444331          0000   11222


Q ss_pred             cccccCcccc--------------CcccccccccCcceeEEEEc--CCEEEEecCCCe-EEEecCCCCCccccccCCCce
Q psy10348        152 TRPFDTQKEH--------------FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENC-IICWKPGRLEDKELRTNETNV  214 (291)
Q Consensus       152 ~~~~~~~~~~--------------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~  214 (291)
                      ...++.....              .+....+.+|...|.+++|+  +++|++++.|++ |++||+++++.          
T Consensus       161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~----------  230 (355)
T 3vu4_A          161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL----------  230 (355)
T ss_dssp             EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE----------
T ss_pred             EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE----------
Confidence            2222222111              01155667899999999998  789999999998 99999998754          


Q ss_pred             eeeeeec-C-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee----------------EEEec-ccccc
Q psy10348        215 TIINRLN-F-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF----------------QILSH-PRCMS  275 (291)
Q Consensus       215 ~~~~~~~-~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----------------~~~~~-~~~~~  275 (291)
                        +..+. + |...|..++|+  |++++|++++.|++|++||+......+...                ..... .....
T Consensus       231 --~~~~~~g~h~~~v~~~~~s--~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (355)
T 3vu4_A          231 --VREFRRGLDRADVVDMKWS--TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV  306 (355)
T ss_dssp             --EEEEECTTCCSCEEEEEEC--TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred             --EEEEEcCCCCCcEEEEEEC--CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence              67776 4 77777776655  669999999999999999998764221100                00000 11122


Q ss_pred             ceeeeEEccCCceeeC
Q psy10348        276 AVRQTTLSKNGNVLLC  291 (291)
Q Consensus       276 ~v~~~~~s~~g~~l~s  291 (291)
                      +...++|++||++|++
T Consensus       307 ~~~~~a~~~d~~~l~~  322 (355)
T 3vu4_A          307 RGCKIAWISESSLVVV  322 (355)
T ss_dssp             CCCEEEESSSSEEEEE
T ss_pred             CceEEEEeCCCCEEEE
Confidence            3467899999998863

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.9e-30  Score=210.87  Aligned_cols=224  Identities=17%  Similarity=0.221  Sum_probs=180.2

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ++.++||+++     +||+|. |++|+|||..+++.+..+.  +|...|++|+|+| ++++|++|+.||.|++||+++++
T Consensus       108 ~~~l~wS~~n-----~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~  180 (420)
T 4gga_A          108 LNLVDWSSGN-----VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQK  180 (420)
T ss_dssp             CBCEEECTTS-----EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTE
T ss_pred             ceeEEECCCC-----EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCc
Confidence            4678999754     888875 8999999999999887765  5678899999999 99999999999999999999999


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      .+..+   .+|...+.++.|+  +..|++|+.|+.+++||.......                           ...+.+
T Consensus       181 ~~~~~---~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~---------------------------~~~~~~  228 (420)
T 4gga_A          181 RLRNM---TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH---------------------------VATLSG  228 (420)
T ss_dssp             EEEEE---CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE---------------------------EEEEEC
T ss_pred             EEEEE---eCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee---------------------------eEEecc
Confidence            99888   7999999998875  679999999999999998765422                           222345


Q ss_pred             cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE--EcC
Q psy10348        171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV--GNQ  246 (291)
Q Consensus       171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~--~~~  246 (291)
                      |...+..+.+.  +.++++++.|+.+++|+....+...        ..+.....+...|..+++++. +..++++  |+.
T Consensus       229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~--------~~~~~~~~~~~~V~~~~~~p~-~~~~la~~~gs~  299 (420)
T 4gga_A          229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW--------VPLQTFTQHQGAVKAVAWCPW-QSNVLATGGGTS  299 (420)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS--------CCSEEECCCSSCEEEEEECTT-CTTEEEEEECTT
T ss_pred             cccceeeeeecCCCCeeeeeeccccceEEeeccccccc--------eeeeeecccCCceeeeeeCCC-cccEEEEEeecC
Confidence            88999999998  7899999999999999998764321        224566777888888777653 2455554  458


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |++|++||+.+++.    ...+.   +...+.++.|+|+++.|++
T Consensus       300 D~~I~iwd~~t~~~----~~~~~---~~~~v~~~~~~~~~~~lv~  337 (420)
T 4gga_A          300 DRHIRIWNVCSGAC----LSAVD---AHSQVCSILWSPHYKELIS  337 (420)
T ss_dssp             TCEEEEEETTTTEE----EEEEE---CSSCEEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCcccc----ceeec---cccceeeeeecCCCCeEEE
Confidence            99999999998842    22332   3458999999999998863

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.4e-31  Score=212.08  Aligned_cols=210  Identities=14%  Similarity=0.133  Sum_probs=161.3

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~   88 (291)
                      ...|.+++|+|++    .+|++|+.||.|++||+ +++.+..+.+|...|.+++|+| ++. +|++++.|+.|++||+++
T Consensus       163 ~~~v~~~~~~~~~----~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~  236 (383)
T 3ei3_B          163 DYWYCCVDVSVSR----QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRN  236 (383)
T ss_dssp             SCCEEEEEEETTT----TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGG
T ss_pred             CCCeEEEEECCCC----CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCC
Confidence            4779999999998    59999999999999999 5788889999999999999999 667 999999999999999997


Q ss_pred             ----cceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         89 ----DICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        89 ----~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                          +..+..+    +|...|.+++|+| ++.+|++++.|+.|++||+++++....+.........           +..
T Consensus       237 ~~~~~~~~~~~----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----------~~~  301 (383)
T 3ei3_B          237 IKDKNSYIAEM----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ-----------HLT  301 (383)
T ss_dssp             CCSTTCEEEEE----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT-----------TSC
T ss_pred             CCcccceEEEe----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc-----------ccc
Confidence                5555554    6999999999999 9999999999999999999998876554421110000           000


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC--cccEEEEEEEecCCCc
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK--DCEIWFIRFSMDYWQK  239 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~  239 (291)
                      .+...-.....+..++|+  +.+  +++.|+.|++||+.+++.            +..+..+  ...+..+  +++|+++
T Consensus       302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~------------~~~l~~~~~~~~~~~~--~~s~~g~  365 (383)
T 3ei3_B          302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL------------VHQLRDPNAAGIISLN--KFSPTGD  365 (383)
T ss_dssp             CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE------------EEEECBTTBCSCCCEE--EECTTSS
T ss_pred             ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce------------eeeecCCCCCceEEEE--EEecCcc
Confidence            000000112345556666  444  888999999999988754            5666653  3444444  4557799


Q ss_pred             EEEEEcCCCcEEEEEcCC
Q psy10348        240 ILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~  257 (291)
                      +|++|+ ||.|++||+++
T Consensus       366 ~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          366 VLASGM-GFNILIWNRED  382 (383)
T ss_dssp             EEEEEE-TTEEEEEECC-
T ss_pred             EEEEec-CCcEEEEecCC
Confidence            999997 99999999875

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.98  E-value=1.1e-30  Score=212.83  Aligned_cols=215  Identities=16%  Similarity=0.292  Sum_probs=171.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-------eEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-------VRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .|...|++++|+|++.   .+|++|+.||.|++|++.++..       ...+.+|...|.+++|+|.++.+|++++.||.
T Consensus       179 ~h~~~v~~l~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~  255 (430)
T 2xyi_A          179 GHQKEGYGLSWNPNLN---GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK  255 (430)
T ss_dssp             CCSSCCCCEEECTTST---TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred             CCCCCeEEEEeCCCCC---CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence            5788999999999974   4999999999999999987322       45677899999999999977889999999999


Q ss_pred             EEEEECCCc---ceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccc
Q psy10348         81 LRLWNIKTD---ICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        81 i~vwd~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~  155 (291)
                      |++||++++   +.+..+   ..|...|++++|+|++. +|++|+.||.|++||+++.. .+.                 
T Consensus       256 i~i~d~~~~~~~~~~~~~---~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~-----------------  315 (430)
T 2xyi_A          256 LMIWDTRNNNTSKPSHTV---DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH-----------------  315 (430)
T ss_dssp             EEEEETTCSCSSSCSEEE---ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE-----------------
T ss_pred             EEEEECCCCCCCcceeEe---ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE-----------------
Confidence            999999977   455555   68999999999999987 68899999999999998743 222                 


Q ss_pred             cCccccCcccccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccc--cCCCceeeeeeecCCcccEEEE
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELR--TNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                                 .+..|...|.+++|+  + .+|++++.|+.|++||+.........  ........+..+.+|...+..+
T Consensus       316 -----------~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~  384 (430)
T 2xyi_A          316 -----------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF  384 (430)
T ss_dssp             -----------EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEE
T ss_pred             -----------EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEE
Confidence                       223488999999998  4 47999999999999999774321000  0001113466677788777766


Q ss_pred             EEEecCCCc-EEEEEcCCCcEEEEEcCCC
Q psy10348        231 RFSMDYWQK-ILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       231 ~~~~~~~~~-~l~~~~~dg~i~vwd~~~~  258 (291)
                      +|+  |++. +|++++.||.|++|++...
T Consensus       385 ~~~--p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          385 SWN--PNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEC--SSSTTEEEEEETTSEEEEEEECHH
T ss_pred             EEC--CCCCCEEEEEECCCCEEEeEcccc
Confidence            554  6688 8999999999999999764

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.98  E-value=3.2e-30  Score=201.70  Aligned_cols=204  Identities=17%  Similarity=0.237  Sum_probs=161.9

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe----------------------------------
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY----------------------------------   53 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~----------------------------------   53 (291)
                      .|...|++++|+|++    ++|++|+.||+|++||+++++.+..+.                                  
T Consensus        65 ~~~~~V~~v~~~~~~----~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~  140 (318)
T 4ggc_A           65 QPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE  140 (318)
T ss_dssp             STTCCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred             CCCCeEEEEEECCCC----CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc
Confidence            366789999999999    499999999999999999877655443                                  


Q ss_pred             -------eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee-ccccCCCCceEEEEEccCCCEE---EEEec
Q psy10348         54 -------GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF-GGVEGHRDEVLSADFDLLGTKI---MSCGM  122 (291)
Q Consensus        54 -------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l---~~~~~  122 (291)
                             +|...+..+.+++ ++.+|++++.||.|++||+++++..... .....+...|.++.++|++..+   ++++.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  219 (318)
T 4ggc_A          141 HHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS  219 (318)
T ss_dssp             CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred             eeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence                   4556677777888 8899999999999999999877543211 1125788899999999987643   45677


Q ss_pred             CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE--ecCCCeEEEec
Q psy10348        123 DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS--KSCENCIICWK  198 (291)
Q Consensus       123 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~--~~~d~~i~iwd  198 (291)
                      ++.|++||.+.........                             +...+..+.|.  ++.+++  |+.|+.|++||
T Consensus       220 ~~~i~lwd~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd  270 (318)
T 4ggc_A          220 DRHIRIWNVCSGACLSAVD-----------------------------AHSQVCSILWSPHYKELISGHGFAQNQLVIWK  270 (318)
T ss_dssp             TCEEEEEETTTCCEEEEEE-----------------------------CSSCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEeccccccccccc-----------------------------ceeeeeeeeecccccceEEEEEcCCCEEEEEE
Confidence            8999999998876543322                             66678888887  555544  45799999999


Q ss_pred             CCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        199 PGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      +++++.            +..+.+|...|..++|+  |++++|++|+.||+|+|||+...+
T Consensus       271 ~~~~~~------------~~~l~gH~~~V~~l~~s--pdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          271 YPTMAK------------VAELKGHTSRVLSLTMS--PDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             TTTCCE------------EEEECCCSSCEEEEEEC--TTSSCEEEEETTTEEEEECCSCCC
T ss_pred             CCCCcE------------EEEEcCCCCCEEEEEEc--CCCCEEEEEecCCeEEEEECCCCC
Confidence            998744            88899999998877665  669999999999999999998754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.98  E-value=4.5e-31  Score=228.75  Aligned_cols=211  Identities=18%  Similarity=0.253  Sum_probs=169.8

Q ss_pred             eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348          8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i   81 (291)
                      .|.++|++++|+|+  +    .+|++|+.||.|++||+.+++  .+..+.+|...|.+++|+| +  +.++++|+.||.|
T Consensus        51 ~h~~~V~~l~~s~~~~~----~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I  125 (753)
T 3jro_A           51 GHEGPVWRVDWAHPKFG----TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKV  125 (753)
T ss_dssp             CCSSCEEEEEECCTTSC----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEE
T ss_pred             CCcCceEEEEecCCCCC----CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcE
Confidence            47899999999988  5    599999999999999999886  6777888999999999999 6  8999999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEcc-------------CCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDL-------------LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      ++||+.++...... .+.+|...|.+++|+|             ++.+|++|+.||.|++||++++......        
T Consensus       126 ~vwdl~~~~~~~~~-~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~--------  196 (753)
T 3jro_A          126 SVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL--------  196 (753)
T ss_dssp             EEEECCSSSCCCCE-EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE--------
T ss_pred             EEEEeecCCCccee-EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee--------
Confidence            99999877432221 1268999999999999             5899999999999999999876432111        


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                                      .....+|...|.+++|+     ++++++++.||.|++||++.......       ..+.....+
T Consensus       197 ----------------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~-------~~~~~~~~~  253 (753)
T 3jro_A          197 ----------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK-------KTLLKEEKF  253 (753)
T ss_dssp             ----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB-------CCBSSSSCC
T ss_pred             ----------------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce-------eEEeccCCC
Confidence                            12234589999999998     45899999999999999987642100       112333445


Q ss_pred             cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ...+..+++  +|++++|++|+.||.|++|++..
T Consensus       254 ~~~v~~l~~--spdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          254 PDVLWRASW--SLSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             SSCCCCEEE--CTTTCCEEEECSSSCEECCBCCS
T ss_pred             CCceEEEEE--cCCCCEEEEEcCCCEEEEEecCC
Confidence            666665555  56799999999999999999985

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=6e-30  Score=205.95  Aligned_cols=226  Identities=10%  Similarity=0.045  Sum_probs=150.8

Q ss_pred             eecceeEEEEeeeccC----CCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          8 LIEENFYTCAWSMDLE----SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~----~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .|.+.|++++|+|...    .++++||+|+.|++|+|||+.++..+..+..|..+|.+++|+|.++.+|++|+.||+|++
T Consensus       134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~  213 (393)
T 4gq1_A          134 GHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI  213 (393)
T ss_dssp             SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred             CCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE
Confidence            4889999999998211    123699999999999999999888888888899999999999944568999999999999


Q ss_pred             EECCCcceeeeec----------------------cccCCCCceEEEEEc-cCCCEEEEEecCCcEEEEeccCchhhhhh
Q psy10348         84 WNIKTDICIAIFG----------------------GVEGHRDEVLSADFD-LLGTKIMSCGMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus        84 wd~~~~~~~~~~~----------------------~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~  140 (291)
                      ||+++++......                      ...+|...+.++.|+ |+++.|++++.|+++++||+..++....+
T Consensus       214 wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l  293 (393)
T 4gq1_A          214 FDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI  293 (393)
T ss_dssp             EETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred             EECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence            9998775433221                      124677889999986 79999999999999999999888765554


Q ss_pred             ccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeee
Q psy10348        141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      ..........         ...+.......+...+..+.+.   +.++++|+.||+|++||+.+++.            +
T Consensus       294 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~------------~  352 (393)
T 4gq1_A          294 SDSTMKLGPK---------NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS------------N  352 (393)
T ss_dssp             -------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC------------C
T ss_pred             eeecCccccE---------EEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE------------E
Confidence            3211100000         0001111111122223333332   33678889999999999988755            4


Q ss_pred             eeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        218 NRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      .....+...|..+  +++|||++||+++.+| +.+|.+..
T Consensus       353 ~~~~~~~~~V~sv--afspdG~~LA~as~~G-v~lvrL~g  389 (393)
T 4gq1_A          353 SIPIQLGMPIVDF--CWHQDGSHLAIATEGS-VLLTRLMG  389 (393)
T ss_dssp             EEEEECSSCEEEE--EECTTSSEEEEEESSE-EEEEEEGG
T ss_pred             EEecCCCCcEEEE--EEcCCCCEEEEEeCCC-eEEEEEeC
Confidence            4455566677655  4557799999999776 66666543

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=9.9e-29  Score=189.20  Aligned_cols=212  Identities=13%  Similarity=0.087  Sum_probs=145.4

Q ss_pred             EEEEecCCCeEEEEccCCc---ceeEEEeeecc-------------------------ceeEEEEecCC----CcEEEEe
Q psy10348         28 LLAVAGSRAVIRIFSPAFH---ACVRHFYGHGH-------------------------AINELKFHPQD----FNLLLSV   75 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~-------------------------~v~~~~~~~~~----~~~l~s~   75 (291)
                      .++++++ ..|++|+..++   ++++++..|+.                         .|.+++|+| +    +..++++
T Consensus        56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp-d~~~~~~~l~s~  133 (356)
T 2w18_A           56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS-DDESEKQVLLKS  133 (356)
T ss_dssp             EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-------CCEEEEEE
T ss_pred             EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC-CccccccEEEeC
Confidence            6777776 58999999988   77888777664                         556667777 6    6677765


Q ss_pred             ec--------------------CCeEEEEEC-CCcceeeeeccccCCCCceEEEEEcc---CCCEEEEEecCCcEEEEec
Q psy10348         76 SK--------------------DHTLRLWNI-KTDICIAIFGGVEGHRDEVLSADFDL---LGTKIMSCGMDHSLKLWDL  131 (291)
Q Consensus        76 ~~--------------------dg~i~vwd~-~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~v~d~  131 (291)
                      +.                    |+.|++|++ .+|+.+..+   ..|...++.++|++   ++.+|++++.|++|++||+
T Consensus       134 g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~---~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl  210 (356)
T 2w18_A          134 GNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQ---FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNL  210 (356)
T ss_dssp             EEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEE---EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEET
T ss_pred             CCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeee---ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEEC
Confidence            53                    777888887 446666655   57788888888888   6688999999999999999


Q ss_pred             cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCE------------EEEecCCCeEEEe
Q psy10348        132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDF------------VLSKSCENCIICW  197 (291)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~------------l~~~~~d~~i~iw  197 (291)
                      .+++++.++....                         .+...+.+++|+  |.+            +++|+.|++|++|
T Consensus       211 ~TGk~l~tL~g~~-------------------------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW  265 (356)
T 2w18_A          211 KTGQLLKKMHIDD-------------------------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI  265 (356)
T ss_dssp             TTCCEEEEEECCC----------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred             CCCcEEEEEcCCC-------------------------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence            9999877764200                         012345555666  433            4678899999999


Q ss_pred             cCCCCCccccccCCCceeeeeee-----cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc
Q psy10348        198 KPGRLEDKELRTNETNVTIINRL-----NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR  272 (291)
Q Consensus       198 d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  272 (291)
                      |..+++.            +..+     .+|...  .+...++  +.++|+|+.||+|+|||+.+++.    ...+.  +
T Consensus       266 d~~tgk~------------l~v~~~~~p~Gh~~~--~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~----l~tL~--g  323 (356)
T 2w18_A          266 NPKTTLS------------VGVMLYCLPPGQAGR--FLEGDVK--DHCAAAILTSGTIAIWDLLLGQC----TALLP--P  323 (356)
T ss_dssp             ETTTTEE------------EEEEEECCCTTCCCC--EEEEEEE--TTEEEEEETTSCEEEEETTTCSE----EEEEC--C
T ss_pred             ECCCCEE------------EEEEEeeccCCCcce--eEccccC--CCEEEEEcCCCcEEEEECCCCcE----EEEec--C
Confidence            9988754            2222     234333  2333444  88999999999999999999853    23443  5


Q ss_pred             ccccee-eeEEccCCceeeC
Q psy10348        273 CMSAVR-QTTLSKNGNVLLC  291 (291)
Q Consensus       273 ~~~~v~-~~~~s~~g~~l~s  291 (291)
                      |...+. +++|||||++|++
T Consensus       324 H~~~vvs~vafSPDG~~LaS  343 (356)
T 2w18_A          324 VSDQHWSFVKWSGTDSHLLA  343 (356)
T ss_dssp             C--CCCCEEEECSSSSEEEE
T ss_pred             CCCCeEEEEEECCCCCEEEE
Confidence            666555 5899999999985

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=4.6e-28  Score=194.95  Aligned_cols=224  Identities=9%  Similarity=0.046  Sum_probs=172.8

Q ss_pred             eeeecceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCeEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHTLRL   83 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~i~v   83 (291)
                      .+.+...+.+++|+|++.    ++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+| ++++|+ +++.++.|++
T Consensus        27 ~~~~~~~~~~~~~s~dg~----~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp-dg~~l~~~~~~~~~v~v  100 (391)
T 1l0q_A           27 TIPVGSNPMGAVISPDGT----KVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP-DGKQVYVTNMASSTLSV  100 (391)
T ss_dssp             EEECSSSEEEEEECTTSS----EEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEETTTTEEEE
T ss_pred             EeecCCCcceEEECCCCC----EEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC-CCCEEEEEECCCCEEEE
Confidence            344566789999999985    55 777799999999999999988887554 899999999 777665 5556799999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEE-EEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKI-MSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      ||+.+++.+..+    .+...+.+++|+|+++.+ ++++.|+.|++||+.+++....+.                     
T Consensus       101 ~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---------------------  155 (391)
T 1l0q_A          101 IDTTSNTVAGTV----KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS---------------------  155 (391)
T ss_dssp             EETTTTEEEEEE----ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---------------------
T ss_pred             EECCCCeEEEEE----eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe---------------------
Confidence            999999888776    344578999999999977 678889999999999887654433                     


Q ss_pred             cccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                              ....+.+++|+  ++++ ++++.|+.|++||+++.+.            +..+..+ ..+.  .++++|+++
T Consensus       156 --------~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~-~~~~--~~~~~~~g~  212 (391)
T 1l0q_A          156 --------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV------------IDTVKVE-AAPS--GIAVNPEGT  212 (391)
T ss_dssp             --------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE------------EEEEECS-SEEE--EEEECTTSS
T ss_pred             --------cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE------------EEEEecC-CCcc--ceEECCCCC
Confidence                    23446888898  5555 6778899999999988743            3444332 3344  455667899


Q ss_pred             EEEEEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        240 ILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       240 ~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|++++   .++.|++||+.+++.    ...+.  .+ ..+.+++|+|+|++|+
T Consensus       213 ~l~~~~~~~~~~~v~~~d~~~~~~----~~~~~--~~-~~~~~~~~s~dg~~l~  259 (391)
T 1l0q_A          213 KAYVTNVDKYFNTVSMIDTGTNKI----TARIP--VG-PDPAGIAVTPDGKKVY  259 (391)
T ss_dssp             EEEEEEECSSCCEEEEEETTTTEE----EEEEE--CC-SSEEEEEECTTSSEEE
T ss_pred             EEEEEecCcCCCcEEEEECCCCeE----EEEEe--cC-CCccEEEEccCCCEEE
Confidence            999888   689999999998742    23333  22 3578999999999873

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.97  E-value=3.4e-28  Score=198.31  Aligned_cols=223  Identities=13%  Similarity=0.024  Sum_probs=177.3

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~   86 (291)
                      .|...|.+++|++++    .++++++.|+.|++||+++++.+..+..|...+.+++|+| ++..+ ++++.|+.|++||+
T Consensus       167 ~~~~~v~~~~~~~~~----~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~  241 (433)
T 3bws_A          167 KKLGFVETISIPEHN----ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDR  241 (433)
T ss_dssp             TTCCEEEEEEEGGGT----EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEET
T ss_pred             ccCCceeEEEEcCCC----EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEEC
Confidence            356789999999888    4999999999999999999999999988999999999999 77766 55558999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEe--------cCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG--------MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      ++++.+..+    .+...+.+++|+|+++++++++        .|+.|++||+++++....+.                 
T Consensus       242 ~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-----------------  300 (433)
T 3bws_A          242 KTKLEIRKT----DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-----------------  300 (433)
T ss_dssp             TTTEEEEEC----CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-----------------
T ss_pred             CCCcEEEEe----cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-----------------
Confidence            999887776    3345699999999999999888        48899999999876544332                 


Q ss_pred             cccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                                  |...+.+++|+  ++ ++++++.|+.|++||+.+.+.            +..+. +...+.  .++++
T Consensus       301 ------------~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~------------~~~~~-~~~~~~--~~~~s  353 (433)
T 3bws_A          301 ------------PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV------------QKSIP-VFDKPN--TIALS  353 (433)
T ss_dssp             ------------EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE------------EEEEE-CSSSEE--EEEEC
T ss_pred             ------------CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE------------EEEec-CCCCCC--eEEEc
Confidence                        55578889998  54 557778999999999987643            44444 333444  45566


Q ss_pred             CCCcEEEEEcC---------------CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        236 YWQKILAVGNQ---------------SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       236 ~~~~~l~~~~~---------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      |++++|++++.               ||.|++||+.+++.    ...+..   ...+.+++|+|+|++|+
T Consensus       354 ~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~----~~~~~~---~~~~~~~~~s~dg~~l~  416 (433)
T 3bws_A          354 PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV----KEFWEA---GNQPTGLDVSPDNRYLV  416 (433)
T ss_dssp             TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE----EEEEEC---SSSEEEEEECTTSCEEE
T ss_pred             CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE----EEEecC---CCCCceEEEcCCCCEEE
Confidence            77999988876               57999999988742    233332   35789999999999886

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.97  E-value=2.8e-28  Score=198.85  Aligned_cols=223  Identities=9%  Similarity=0.006  Sum_probs=174.6

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-----EeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-----FYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      ....+.+++|+|++    .++++++.++.|++||+.+++.+..     +.+|...|.+++|+| ++.++++++.|+.|++
T Consensus       121 ~~~~~~~~~~s~~~----~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~  195 (433)
T 3bws_A          121 TGFQPKSVRFIDNT----RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHV  195 (433)
T ss_dssp             CSSCBCCCEESSSS----EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEE
T ss_pred             CCCCceEEEEeCCC----eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEE
Confidence            44567789999955    5888888899999999999988763     346788999999998 8899999999999999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      ||+++++.+..+   ..|...+.+++|+|++++++++ +.|+.|++||+++++....+.                     
T Consensus       196 ~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~---------------------  251 (433)
T 3bws_A          196 FDLKTLAYKATV---DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD---------------------  251 (433)
T ss_dssp             EETTTCCEEEEE---ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC---------------------
T ss_pred             EECCCceEEEEE---cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec---------------------
Confidence            999999888887   6788999999999999988554 479999999999887654432                     


Q ss_pred             cccccccccCcceeEEEEc--CCEEEEec--------CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDFVLSKS--------CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                              +...+.+++|+  ++++++++        .|+.|++||+++++.            +..+ .+...+..  +
T Consensus       252 --------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~------------~~~~-~~~~~~~~--~  308 (433)
T 3bws_A          252 --------KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL------------IDTI-GPPGNKRH--I  308 (433)
T ss_dssp             --------CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE------------EEEE-EEEECEEE--E
T ss_pred             --------CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE------------Eeec-cCCCCcce--E
Confidence                    33458899998  66888877        588999999987643            3322 12223333  4


Q ss_pred             EecCCCcEE-EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        233 SMDYWQKIL-AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       233 ~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++|+++.+ ++++.|+.|++||+.+++.    ...+   .+...+.+++|+|+|++|+
T Consensus       309 ~~~~~g~~l~~~~~~~~~v~v~d~~~~~~----~~~~---~~~~~~~~~~~s~dg~~l~  360 (433)
T 3bws_A          309 VSGNTENKIYVSDMCCSKIEVYDLKEKKV----QKSI---PVFDKPNTIALSPDGKYLY  360 (433)
T ss_dssp             EECSSTTEEEEEETTTTEEEEEETTTTEE----EEEE---ECSSSEEEEEECTTSSEEE
T ss_pred             EECCCCCEEEEEecCCCEEEEEECCCCcE----EEEe---cCCCCCCeEEEcCCCCEEE
Confidence            556778655 6668999999999997642    2333   2456799999999999876

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=2.4e-28  Score=194.75  Aligned_cols=215  Identities=9%  Similarity=0.116  Sum_probs=154.4

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEE--ecCCCcEEEEeecCCeEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKF--HPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg~i~v   83 (291)
                      ...|...|++++|+|++    ++|++++.||.|++||+++++.+. +..|...|.+++|  +| ++.+|++++.||.|++
T Consensus        82 ~~~h~~~v~~~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~v  155 (368)
T 3mmy_A           82 QQMHTGPVLDVCWSDDG----SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKF  155 (368)
T ss_dssp             EEECSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEE
T ss_pred             eccccCCEEEEEECcCC----CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEE
Confidence            34578999999999988    599999999999999999888766 5679999999999  88 8899999999999999


Q ss_pred             EECCCcceeeeeccccCCC-----------------------------------------CceEEEEEccCCCE----EE
Q psy10348         84 WNIKTDICIAIFGGVEGHR-----------------------------------------DEVLSADFDLLGTK----IM  118 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~-----------------------------------------~~i~~~~~~~~~~~----l~  118 (291)
                      ||+++++.+..+   ..+.                                         ..+.++.+.++...    ++
T Consensus       156 wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (368)
T 3mmy_A          156 WDTRSSNPMMVL---QLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA  232 (368)
T ss_dssp             ECSSCSSCSEEE---ECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred             EECCCCcEEEEE---ecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence            999988877665   2222                                         22233333333222    55


Q ss_pred             EEecCCcEEEEeccCchh---hhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCe
Q psy10348        119 SCGMDHSLKLWDLTKPEI---KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENC  193 (291)
Q Consensus       119 ~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~  193 (291)
                      +++.||.|++||++....   ...+..+..                .........|...|.+++|+  +++|++++.||.
T Consensus       233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~  296 (368)
T 3mmy_A          233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRS----------------NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR  296 (368)
T ss_dssp             EEETTSEEEEEESSCSCHHHHSEEEECSEE----------------C----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred             EecCCCcEEEEecCCCCccccceeeeeeec----------------ccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence            566666666666655422   111110000                00000111233479999998  679999999999


Q ss_pred             EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        194 IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       194 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      |++||+.+++            .+..+..|...+..++|+  |++++|++|+.|+..+.|++...+
T Consensus       297 i~iwd~~~~~------------~~~~~~~~~~~v~~~~~s--~~g~~l~~~s~d~~~~~~~~~~~~  348 (368)
T 3mmy_A          297 FSFWDKDART------------KLKTSEQLDQPISACCFN--HNGNIFAYASSYDWSKGHEFYNPQ  348 (368)
T ss_dssp             EEEEETTTTE------------EEEECCCCSSCEEEEEEC--TTSSCEEEEECCCSTTCGGGCCTT
T ss_pred             EEEEECCCCc------------EEEEecCCCCCceEEEEC--CCCCeEEEEecccccccccccCCC
Confidence            9999998874            477888888888776655  669999999999877777766554

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=2.6e-27  Score=190.55  Aligned_cols=207  Identities=9%  Similarity=0.014  Sum_probs=162.7

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i  105 (291)
                      .++++++.|+.|++||+++++.+..+..|. .+.+++|+| +++++ ++++.|+.|++||+.+++.+..+   ..+ ..+
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~~-~~v   76 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATV---PAG-SSP   76 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECS-SSE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEE---ECC-CCc
Confidence            478889999999999999999998888664 589999999 77765 67779999999999999988877   333 499


Q ss_pred             EEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        106 LSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      .+++|+|++++|+.+ +.++.|++||+.+++....+.                             +...+.+++|+  +
T Consensus        77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-----------------------------~~~~~~~~~~s~dg  127 (391)
T 1l0q_A           77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-----------------------------TGKSPLGLALSPDG  127 (391)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------------------------CSSSEEEEEECTTS
T ss_pred             cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-----------------------------CCCCcceEEECCCC
Confidence            999999999987654 467999999999887654432                             34457899998  5


Q ss_pred             CEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE-EEEcCCCcEEEEEcCCCCC
Q psy10348        183 DFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL-AVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       183 ~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~  260 (291)
                      +++ ++++.|+.|++||+.+++.            +..+..+.. +.  .++++|++++| ++++.|+.|++||+.+++.
T Consensus       128 ~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~~~-~~--~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~  192 (391)
T 1l0q_A          128 KKLYVTNNGDKTVSVINTVTKAV------------INTVSVGRS-PK--GIAVTPDGTKVYVANFDSMSISVIDTVTNSV  192 (391)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEE------------EEEEECCSS-EE--EEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             CEEEEEeCCCCEEEEEECCCCcE------------EEEEecCCC-cc--eEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence            555 7888899999999987743            455554433 33  45566779887 6778899999999998742


Q ss_pred             CcceeEEEeccccccceeeeEEccCCceee
Q psy10348        261 SSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                          ...+.   +...+.+++|+|+|++|+
T Consensus       193 ----~~~~~---~~~~~~~~~~~~~g~~l~  215 (391)
T 1l0q_A          193 ----IDTVK---VEAAPSGIAVNPEGTKAY  215 (391)
T ss_dssp             ----EEEEE---CSSEEEEEEECTTSSEEE
T ss_pred             ----EEEEe---cCCCccceEECCCCCEEE
Confidence                23332   346889999999999876

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=3.4e-27  Score=187.39  Aligned_cols=214  Identities=10%  Similarity=0.113  Sum_probs=155.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC---------------------
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF---------------------   69 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------   69 (291)
                      ..+..+++.++.+   .++++++.|++|++||..+++.+..+. +..+|.+++|++ +.                     
T Consensus        59 ~~~~~~~~~~~~~---~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~-~~~~~~~~~~i~i~d~~~~~~~~  133 (355)
T 3vu4_A           59 RHLSKVRMLHRTN---YVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR-EFIVVSYGDVISVFKFGNPWKRI  133 (355)
T ss_dssp             SCCCEEEECTTSS---EEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS-SEEEEEETTEEEEEESSTTCCBS
T ss_pred             CCeEEEEEcCCCC---EEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC-CEEEEEEcCEEEEEECCCCceee
Confidence            3577788887764   234678888999999999999988886 667899998887 32                     


Q ss_pred             --------------cEEEE--eecCCeEEEEECCCcc----------------eeeeeccccCCCCceEEEEEccCCCEE
Q psy10348         70 --------------NLLLS--VSKDHTLRLWNIKTDI----------------CIAIFGGVEGHRDEVLSADFDLLGTKI  117 (291)
Q Consensus        70 --------------~~l~s--~~~dg~i~vwd~~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l  117 (291)
                                    .+++.  |+.||.|++||+.+++                .+..+   .+|...|.+++|+|++++|
T Consensus       134 ~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~---~~h~~~v~~~~~s~~g~~l  210 (355)
T 3vu4_A          134 TDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI---KAHTNPIKMVRLNRKSDMV  210 (355)
T ss_dssp             SCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEE---CCCSSCEEEEEECTTSSEE
T ss_pred             EEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE---EccCCceEEEEECCCCCEE
Confidence                          12333  5778888888888654                14445   7999999999999999999


Q ss_pred             EEEecCCc-EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc-cCcceeEEEEc--CCEEEEecCCCe
Q psy10348        118 MSCGMDHS-LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYVDCVRWL--GDFVLSKSCENC  193 (291)
Q Consensus       118 ~~~~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~~~~~d~~  193 (291)
                      ++|+.|++ |++||+++++.+..+.                           .+ |...|.+++|+  +++|++++.|++
T Consensus       211 ~s~s~d~~~v~iwd~~~~~~~~~~~---------------------------~g~h~~~v~~~~~s~~~~~l~s~s~d~~  263 (355)
T 3vu4_A          211 ATCSQDGTIIRVFKTEDGVLVREFR---------------------------RGLDRADVVDMKWSTDGSKLAVVSDKWT  263 (355)
T ss_dssp             EEEETTCSEEEEEETTTCCEEEEEE---------------------------CTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred             EEEeCCCCEEEEEECCCCcEEEEEE---------------------------cCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence            99999998 9999999988665543                           13 88899999998  779999999999


Q ss_pred             EEEecCCCCCccccccCCC--------ceeeeee--ecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348        194 IICWKPGRLEDKELRTNET--------NVTIINR--LNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       194 i~iwd~~~~~~~~~~~~~~--------~~~~~~~--~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      |++||++............        .......  +.. .....  ..+++++++++|++++.||.+++|++..++..
T Consensus       264 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~  340 (355)
T 3vu4_A          264 LHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRG--CKIAWISESSLVVVWPHTRMIETFKVVFDDEM  340 (355)
T ss_dssp             EEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCC--CEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred             EEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCc--eEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence            9999997653221100000        0000001  111 11111  23566788999999999999999999876543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=1e-25  Score=182.42  Aligned_cols=220  Identities=13%  Similarity=-0.017  Sum_probs=166.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCC---eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCe--
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRA---VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHT--   80 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg---~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~--   80 (291)
                      ..|...+.+++|+|++    +.|++++.++   .|++||+++++.. .+..|...+.+++|+| +++.|+ +++.++.  
T Consensus       175 ~~~~~~v~~~~~Spdg----~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~  248 (415)
T 2hqs_A          175 HRSPQPLMSPAWSPDG----SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLN  248 (415)
T ss_dssp             EEESSCEEEEEECTTS----SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECTTSSCE
T ss_pred             eCCCCcceeeEEcCCC----CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEEEEecCCCce
Confidence            3578899999999999    4999988775   9999999988865 5667888999999999 888777 6666654  


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      |++||+.+++.. .+   ..|...+.+++|+|+|++|++++. ++  .|.+||+.+++... +                 
T Consensus       249 i~~~d~~~~~~~-~l---~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l-----------------  306 (415)
T 2hqs_A          249 LYVMDLASGQIR-QV---TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-I-----------------  306 (415)
T ss_dssp             EEEEETTTCCEE-EC---CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-C-----------------
T ss_pred             EEEEECCCCCEE-eC---cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-E-----------------
Confidence            999999987763 44   578889999999999999988876 45  57777887765321 1                 


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                                 ..+...+.+++|+  |++|++++.+   ..|.+||+.+++.             ..+..+. .+.  .+
T Consensus       307 -----------~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-------------~~l~~~~-~~~--~~  359 (415)
T 2hqs_A          307 -----------TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-------------QVLSSTF-LDE--TP  359 (415)
T ss_dssp             -----------CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-------------EECCCSS-SCE--EE
T ss_pred             -----------ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-------------EEecCCC-CcC--Ce
Confidence                       1255678889998  7788777654   6899999987643             2233332 344  34


Q ss_pred             EecCCCcEEEEEcCCC---cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        233 SMDYWQKILAVGNQSG---RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       233 ~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                      +++|+|++|++++.++   .|++||+..+.       ......|.+.|.+++|+|.-.+
T Consensus       360 ~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-------~~~l~~~~~~v~~~~~~~~~~~  411 (415)
T 2hqs_A          360 SLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-------KARLPATDGQVKFPAWSPYLHH  411 (415)
T ss_dssp             EECTTSSEEEEEEEETTEEEEEEEETTSCC-------EEECCCSSSEEEEEEECCCCCC
T ss_pred             EEcCCCCEEEEEEcCCCccEEEEEECCCCc-------EEEeeCCCCCCcCCcccccccc
Confidence            5668899999998777   79999997542       2233467789999999997543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.94  E-value=2.6e-24  Score=174.13  Aligned_cols=206  Identities=14%  Similarity=0.095  Sum_probs=155.2

Q ss_pred             CEEEEecCC------CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC---eEEEEECCCcceeeeecc
Q psy10348         27 PLLAVAGSR------AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH---TLRLWNIKTDICIAIFGG   97 (291)
Q Consensus        27 ~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~   97 (291)
                      ..++.++.+      +.|++||++ +...+.+..|...+.+++|+| +++.|++++.++   .|++||+.+++... +  
T Consensus       144 ~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~-l--  218 (415)
T 2hqs_A          144 TRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQ-V--  218 (415)
T ss_dssp             CEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEE-E--
T ss_pred             CEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEE-e--
Confidence            466666554      799999997 555678888999999999999 999999998875   99999999887754 3  


Q ss_pred             ccCCCCceEEEEEccCCCEEE-EEecCCc--EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcc
Q psy10348         98 VEGHRDEVLSADFDLLGTKIM-SCGMDHS--LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNY  174 (291)
Q Consensus        98 ~~~~~~~i~~~~~~~~~~~l~-~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (291)
                       ..|...+.+++|+|+|++|+ +++.|+.  |++||+.+++... +                            ..|...
T Consensus       219 -~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~-l----------------------------~~~~~~  268 (415)
T 2hqs_A          219 -ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-V----------------------------TDGRSN  268 (415)
T ss_dssp             -ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-C----------------------------CCCSSC
T ss_pred             -ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEe-C----------------------------cCCCCc
Confidence             46788999999999999887 6666655  9999998876421 1                            236677


Q ss_pred             eeEEEEc--CCEEEEecC-CC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC--
Q psy10348        175 VDCVRWL--GDFVLSKSC-EN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS--  247 (291)
Q Consensus       175 v~~~~~~--~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d--  247 (291)
                      +.+++|+  +++|++++. ++  .|.+||+.+++.             ..+..+...+.  .++++|+|++|++++.+  
T Consensus       269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-------------~~l~~~~~~~~--~~~~spdG~~l~~~~~~~g  333 (415)
T 2hqs_A          269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-------------QRITWEGSQNQ--DADVSSDGKFMVMVSSNGG  333 (415)
T ss_dssp             EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-------------EECCCSSSEEE--EEEECTTSSEEEEEEECSS
T ss_pred             ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-------------EEEecCCCccc--CeEECCCCCEEEEEECcCC
Confidence            8999998  677777765 45  677888877642             22333333333  45667889999988864  


Q ss_pred             -CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        248 -GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       248 -g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                       +.|++||+.+++.     ..+.  .+. .+.+++|+|||++|+
T Consensus       334 ~~~i~~~d~~~~~~-----~~l~--~~~-~~~~~~~spdg~~l~  369 (415)
T 2hqs_A          334 QQHIAKQDLATGGV-----QVLS--STF-LDETPSLAPNGTMVI  369 (415)
T ss_dssp             CEEEEEEETTTCCE-----EECC--CSS-SCEEEEECTTSSEEE
T ss_pred             ceEEEEEECCCCCE-----EEec--CCC-CcCCeEEcCCCCEEE
Confidence             5899999998742     2222  332 789999999999886

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=3.9e-25  Score=170.85  Aligned_cols=230  Identities=12%  Similarity=0.075  Sum_probs=163.3

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeee-ccceeEEEEecCCCcEEEEee--cCCeE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGH-GHAINELKFHPQDFNLLLSVS--KDHTL   81 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~--~dg~i   81 (291)
                      ...|...+.+++|+|++    ++|++++ ++.|++||+.+ ++.......+ ...+.+++|+| ++++|++++  .++..
T Consensus        37 ~~~~~~~v~~~~~spdg----~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~  110 (297)
T 2ojh_A           37 VWQTPELFEAPNWSPDG----KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-DGALYAISDKVEFGKS  110 (297)
T ss_dssp             EEEESSCCEEEEECTTS----SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-TSSEEEEEECTTTSSC
T ss_pred             eccCCcceEeeEECCCC----CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-CCCEEEEEEeCCCCcc
Confidence            34578899999999999    4888876 78999999998 7776655555 36789999999 889999988  33445


Q ss_pred             EEE--ECCCcceeeeeccccCCCCceEEEEEccCCCEEE-EEecCCcEEEEeccCch-hhhhhccccccCCCCccccccC
Q psy10348         82 RLW--NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        82 ~vw--d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      .||  ++.++. ...+    .+...+..++|+|++++|+ ++..|+.+++|+++... ....                  
T Consensus       111 ~l~~~~~~~~~-~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~------------------  167 (297)
T 2ojh_A          111 AIYLLPSTGGT-PRLM----TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR------------------  167 (297)
T ss_dssp             EEEEEETTCCC-CEEC----CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE------------------
T ss_pred             eEEEEECCCCc-eEEe----ecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE------------------
Confidence            555  545444 3333    2333589999999999877 77789999999975321 1111                  


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                                ...+...+.++.|+  +++++.++ .++.+++|++.....           .+..+..+...+..  +.+
T Consensus       168 ----------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~--~~~  224 (297)
T 2ojh_A          168 ----------LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-----------SVERITDSAYGDWF--PHP  224 (297)
T ss_dssp             ----------CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----------CEEECCCCSEEEEE--EEE
T ss_pred             ----------cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----------CcEEEecCCcccCC--eEE
Confidence                      12266778999998  66666555 589999998763221           14445545444444  556


Q ss_pred             cCCCcEEEEEcCC-----------CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        235 DYWQKILAVGNQS-----------GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       235 ~~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +|++++|++++.+           +.|++||+.+++.    .......+|...+.+++|+|+|++|++
T Consensus       225 s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~  288 (297)
T 2ojh_A          225 SPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV----ETLFDLFGGQGTMNSPNWSPDGDEFAY  288 (297)
T ss_dssp             CTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC----EEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred             CCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc----eeeeccCCCCcccccceECCCCCEEEE
Confidence            6889999988866           5699999988753    123333356678999999999998863

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.93  E-value=2.9e-24  Score=174.50  Aligned_cols=203  Identities=15%  Similarity=0.106  Sum_probs=147.0

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----------ceeE-----EEeeeccceeEEEEecCCCcEEE-
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----------ACVR-----HFYGHGHAINELKFHPQDFNLLL-   73 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----------~~~~-----~~~~~~~~v~~~~~~~~~~~~l~-   73 (291)
                      ...++.++++++.    .++++++.++ +++|+....          ..+.     ....+...|.+++|+| ++++|+ 
T Consensus        36 ~~~~n~lavs~~~----~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav  109 (434)
T 2oit_A           36 KERSSLLAVSNKY----GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSA  109 (434)
T ss_dssp             CSCCBCEEEETTT----TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEE
T ss_pred             CCCccEEEEecCC----CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEE
Confidence            4568899999987    4999998887 888875311          0111     1113567899999999 889999 


Q ss_pred             ---EeecCCeEEEEECCCc--------ceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         74 ---SVSKDHTLRLWNIKTD--------ICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        74 ---s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                         +|+.|+.|++||+.++        +.+..+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++...... 
T Consensus       110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-  188 (434)
T 2oit_A          110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-  188 (434)
T ss_dssp             EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-
T ss_pred             EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-
Confidence               7889999999998765        222333334789999999999998 789999999999999999987532211 


Q ss_pred             cccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee
Q psy10348        142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR  219 (291)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  219 (291)
                                                 ..|...|.+++|+  |++|++|+.||.|++||.+ +..            ...
T Consensus       189 ---------------------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~------------~~~  228 (434)
T 2oit_A          189 ---------------------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE------------KKV  228 (434)
T ss_dssp             ---------------------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE------------EEE
T ss_pred             ---------------------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc------------ccc
Confidence                                       2378889999998  8899999999999999998 322            222


Q ss_pred             ecCC-----cccEEEEEEEecCCCcEEEEEc-CCC------cEEEEEcCCCC
Q psy10348        220 LNFK-----DCEIWFIRFSMDYWQKILAVGN-QSG------RTYVWDLDVQD  259 (291)
Q Consensus       220 ~~~~-----~~~i~~~~~~~~~~~~~l~~~~-~dg------~i~vwd~~~~~  259 (291)
                      +..+     .....+.++++++++.++++.+ .||      .+++|++...+
T Consensus       229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~  280 (434)
T 2oit_A          229 IPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE  280 (434)
T ss_dssp             ECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred             ccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence            2211     1123455566666677775533 443      38999998753

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.93  E-value=3.6e-23  Score=172.44  Aligned_cols=247  Identities=8%  Similarity=0.008  Sum_probs=171.9

Q ss_pred             EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC--CCcceeee
Q psy10348         17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI--KTDICIAI   94 (291)
Q Consensus        17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~   94 (291)
                      +++|++    .++++++.|++|.+||..+++++..+..+.. +..++|+| ++++|++++.|+.|.+||+  .+++.+..
T Consensus       144 ~~~p~~----~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~  217 (543)
T 1nir_A          144 DLDLPN----LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAE  217 (543)
T ss_dssp             CCCGGG----EEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred             ccCCCC----EEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence            377776    5899999999999999999999999984333 88999999 9999999999999999999  78888877


Q ss_pred             eccccCCCCceEEEEEcc----CCCEEEEEec-CCcEEEEeccCchhhhhhcc-----------------ccccCCCCcc
Q psy10348         95 FGGVEGHRDEVLSADFDL----LGTKIMSCGM-DHSLKLWDLTKPEIKDACAE-----------------SYTFNPARST  152 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~~----~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~-----------------~~~~~~~~~~  152 (291)
                      +   . +...+..++|+|    +|+++++++. +++|.+||..+++.+..+..                 .+.+++++..
T Consensus       218 i---~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~  293 (543)
T 1nir_A          218 I---K-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE  293 (543)
T ss_dssp             E---E-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred             E---e-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence            7   3 556789999999    9999999885 89999999999887766542                 1122222211


Q ss_pred             ccc-----------cCccccCcccccccccCcceeEEEEc--CCEEEE-ecCCCeEEEecCCCCCccccccCCCceeeee
Q psy10348        153 RPF-----------DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS-KSCENCIICWKPGRLEDKELRTNETNVTIIN  218 (291)
Q Consensus       153 ~~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  218 (291)
                      ..+           +............ .+...+..+.|+  ++++++ +..+++|.+||..+++.            +.
T Consensus       294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l------------~~  360 (543)
T 1nir_A          294 FIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL------------SA  360 (543)
T ss_dssp             EEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE------------EE
T ss_pred             EEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE------------EE
Confidence            111           0000000000011 244557788898  666554 55689999999998754            44


Q ss_pred             eecC----CcccEEEEEEEecCC-CcEEEEEc-CCCcEEEEEcCCCCC---CcceeEEEeccccccceeeeEEccCCcee
Q psy10348        219 RLNF----KDCEIWFIRFSMDYW-QKILAVGN-QSGRTYVWDLDVQDP---SSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       219 ~~~~----~~~~i~~~~~~~~~~-~~~l~~~~-~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      .+..    |....  ..+ .+|+ +.+++++. .|++|.+||+.+...   ..+....+.  .|.+.+..++|+|||++|
T Consensus       361 ~i~~g~~ph~g~g--~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~--~~g~~~~~v~~~pdg~~l  435 (543)
T 1nir_A          361 LVDVGKTPHPGRG--ANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ--GQGGGSLFIKTHPKSSHL  435 (543)
T ss_dssp             EEECSSSBCCTTC--EEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE--CSCSCCCCEECCTTCCEE
T ss_pred             eeccCCCCCCCCC--ccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE--cCCCCceEEEcCCCCCcE
Confidence            4442    22211  122 3465 66677775 689999999988221   113334444  555778899999999998


Q ss_pred             eC
Q psy10348        290 LC  291 (291)
Q Consensus       290 ~s  291 (291)
                      .+
T Consensus       436 ~v  437 (543)
T 1nir_A          436 YV  437 (543)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.92  E-value=7.3e-23  Score=161.52  Aligned_cols=241  Identities=8%  Similarity=0.022  Sum_probs=155.9

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCC-CeEEEEccC--Ccc--eeEEEeeeccceeEEEEecCCCcEEEEee-cCCe
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPA--FHA--CVRHFYGHGHAINELKFHPQDFNLLLSVS-KDHT   80 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~d-g~i~vw~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~   80 (291)
                      +.+...+.+++|+|++    ++|++++.+ +.|.+|+++  +++  .+..+..+ ..+..++|+| ++++|++++ .++.
T Consensus        34 ~~~~~~~~~~~~spdg----~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~  107 (343)
T 1ri6_A           34 VDVPGQVQPMVVSPDK----RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDH-QGQFVFVGSYNAGN  107 (343)
T ss_dssp             EECSSCCCCEEECTTS----SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECT-TSSEEEEEETTTTE
T ss_pred             EecCCCCceEEECCCC----CEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcC-CCCEEEEEecCCCe
Confidence            4566788899999998    477777776 999999997  554  33445443 3789999999 888776665 4889


Q ss_pred             EEEEECC---CcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccC-chhhhhhccccccCCCCccccc
Q psy10348         81 LRLWNIK---TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTK-PEIKDACAESYTFNPARSTRPF  155 (291)
Q Consensus        81 i~vwd~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~  155 (291)
                      |.+||+.   ..+....+    .....+.+++|+|+++++++++ .++.|++||+.+ ++.........           
T Consensus       108 i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----------  172 (343)
T 1ri6_A          108 VSVTRLEDGLPVGVVDVV----EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEV-----------  172 (343)
T ss_dssp             EEEEEEETTEEEEEEEEE----CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEE-----------
T ss_pred             EEEEECCCCccccccccc----cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccc-----------
Confidence            9999994   33444444    2334688999999999888887 799999999987 44221100000           


Q ss_pred             cCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCC--CCccccccCCCceeeeeeecC-CcccEEE
Q psy10348        156 DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGR--LEDKELRTNETNVTIINRLNF-KDCEIWF  229 (291)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~i~~  229 (291)
                                  .......+..++|+  ++++ +++..++.|.+|++..  +....       ...+..+.. +......
T Consensus       173 ------------~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~  233 (343)
T 1ri6_A          173 ------------TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-------VQTLDMMPENFSDTRWA  233 (343)
T ss_dssp             ------------ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-------EEEEECSCTTCCSCCCE
T ss_pred             ------------ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-------EeeccccCccccccCCc
Confidence                        00023356788898  5655 4555799999999954  22100       011111111 1112233


Q ss_pred             EEEEecCCCcEEEE-EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        230 IRFSMDYWQKILAV-GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       230 ~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..++++|++++|++ +..++.|.+||+............+.  .+ ..+.+++|+|+|++|+
T Consensus       234 ~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~-~~~~~~~~s~dg~~l~  292 (343)
T 1ri6_A          234 ADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP--TE-TQPRGFNVDHSGKYLI  292 (343)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE--CS-SSCCCEEECTTSSEEE
T ss_pred             cceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec--CC-CccceEEECCCCCEEE
Confidence            45667788988874 55799999999984221111122222  22 3488999999999775

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.92  E-value=1.2e-22  Score=161.09  Aligned_cols=228  Identities=9%  Similarity=0.027  Sum_probs=167.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc---------eeEEEEecCCCcEEEEee--c
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA---------INELKFHPQDFNLLLSVS--K   77 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~s~~--~   77 (291)
                      ....+.+++|+|++.   .++++...++.|.+||.++++.+..+..+...         +.+++|+| +++++++++  .
T Consensus        87 ~~~~~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~  162 (353)
T 3vgz_A           87 NDLKPFGATINNTTQ---TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGK  162 (353)
T ss_dssp             ESSCCCSEEEETTTT---EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESS
T ss_pred             cCCCcceEEECCCCC---EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCC
Confidence            345677899999884   35556666899999999999988888754422         68899999 777766665  4


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      ++.|.+||+.+++.+..+   ..+...+.+++|+|+++++++++.++.|.+||+.+++....+...              
T Consensus       163 ~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~--------------  225 (353)
T 3vgz_A          163 ESVIWVVDGGNIKLKTAI---QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL--------------  225 (353)
T ss_dssp             SCEEEEEETTTTEEEEEE---CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC--------------
T ss_pred             CceEEEEcCCCCceEEEe---cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC--------------
Confidence            789999999999888877   445666889999999999999999999999999988765443210              


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                                ..++...+..++|+  ++++++++ .++.|.+||..+++.            +..+.....    ..+.+
T Consensus       226 ----------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~~~----~~~~~  279 (353)
T 3vgz_A          226 ----------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI------------LAKVAAPES----LAVLF  279 (353)
T ss_dssp             ----------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE------------EEEEECSSC----CCEEE
T ss_pred             ----------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE------------EEEEEcCCC----ceEEE
Confidence                      01244557788887  66555554 469999999988754            333333322    23555


Q ss_pred             cCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        235 DYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       235 ~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|+++++++++ .++.|.+||+.+++.    ...+..   ...+.+++|+|||++|+
T Consensus       280 s~dg~~l~v~~~~~~~v~~~d~~~~~~----~~~~~~---~~~~~~~~~s~dg~~l~  329 (353)
T 3vgz_A          280 NPARNEAYVTHRQAGKVSVIDAKSYKV----VKTFDT---PTHPNSLALSADGKTLY  329 (353)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTTTEE----EEEEEC---CSEEEEEEECTTSCEEE
T ss_pred             CCCCCEEEEEECCCCeEEEEECCCCeE----EEEEec---CCCCCeEEEcCCCCEEE
Confidence            67798665555 789999999988742    233332   24678999999999764

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.92  E-value=9.7e-24  Score=171.42  Aligned_cols=168  Identities=13%  Similarity=0.120  Sum_probs=127.2

Q ss_pred             eeecceeEEEEeeeccCCCCCEEE----EecCCCeEEEEccCCc--------ce---eEEEeeeccceeEEEEecCCCcE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLA----VAGSRAVIRIFSPAFH--------AC---VRHFYGHGHAINELKFHPQDFNL   71 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~----~~~~dg~i~vw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~   71 (291)
                      +.+...|++++|+|++    ++||    +|+.|+.|+|||+.++        +.   +..+.+|...|.+++|+|.++.+
T Consensus        89 ~~~~~~v~~l~~spdg----~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~  164 (434)
T 2oit_A           89 VPMKFPIHHLALSCDN----LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM  164 (434)
T ss_dssp             ECCSSCEEEEEECTTS----CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred             ccCCCcccEEEEcCCC----CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence            4456789999999998    4888    7899999999998765        22   34455799999999999954899


Q ss_pred             EEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348         72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS  151 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~  151 (291)
                      |++++.||+|++||++++......   .+|...|.+++|+|+|++|++|+.||.|++||++ ++....+......     
T Consensus       165 las~s~Dg~v~iwD~~~~~~~~~~---~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~-----  235 (434)
T 2oit_A          165 VAVCLADGSIAVLQVTETVKVCAT---LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY-----  235 (434)
T ss_dssp             EEEEETTSCEEEEEESSSEEEEEE---ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC-----
T ss_pred             EEEEECCCeEEEEEcCCCcceeec---cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc-----
Confidence            999999999999999988665544   5789999999999999999999999999999998 4333222110000     


Q ss_pred             cccccCccccCcccccccccCcceeEEEEcC-C-EEEE-ecCCC------eEEEecCCCCC
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG-D-FVLS-KSCEN------CIICWKPGRLE  203 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~l~~-~~~d~------~i~iwd~~~~~  203 (291)
                                      ...|...|.++.|++ . ++++ ...||      .+++|+++...
T Consensus       236 ----------------~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~  280 (434)
T 2oit_A          236 ----------------ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE  280 (434)
T ss_dssp             ----------------CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred             ----------------CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence                            012456899999983 3 3322 33343      38999998653

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.92  E-value=7.4e-23  Score=177.64  Aligned_cols=242  Identities=11%  Similarity=0.048  Sum_probs=163.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecC-CC-----eEEEEccCCcceeEEEeeecc------------------------ce
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGS-RA-----VIRIFSPAFHACVRHFYGHGH------------------------AI   59 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~-dg-----~i~vw~~~~~~~~~~~~~~~~------------------------~v   59 (291)
                      .+.+.+++||||+    ++|++++. |+     .|++||+.+++....+..+..                        .+
T Consensus        36 ~~~~~~~~~SpdG----~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  111 (741)
T 2ecf_A           36 GPTLMKPKVAPDG----SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI  111 (741)
T ss_dssp             CCCCEEEEECTTS----SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEES
T ss_pred             CCCCCCceEecCC----CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence            4578999999999    49999888 88     999999999987776665433                        38


Q ss_pred             eEEEEecCCCcEEEEeecCCeEEEEECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348         60 NELKFHPQDFNLLLSVSKDHTLRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK  137 (291)
Q Consensus        60 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~  137 (291)
                      .+++|+| ++++|++++. +.|.+||+.++.  ....+   ..+...+.+++|+|+|++|++++ ++.|++||+.+++..
T Consensus       112 ~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l---~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~  185 (741)
T 2ecf_A          112 VDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQL---THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM  185 (741)
T ss_dssp             CCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBC---CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred             ceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEc---ccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence            8999999 9999999886 999999999872  33444   57788899999999999999887 568999999887644


Q ss_pred             hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC-----------------------
Q psy10348        138 DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN-----------------------  192 (291)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~-----------------------  192 (291)
                      ......     .  ......    .+.. ........+..+.|+  |++|++++.|+                       
T Consensus       186 ~~~~~~-----~--~~~~~g----~~~~-v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~  253 (741)
T 2ecf_A          186 QLTADG-----S--TTIGNG----IAEF-VADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY  253 (741)
T ss_dssp             ECCCCC-----C--SSEEES----CCCH-HHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred             EeccCC-----c--cceecc----ccce-eeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence            322100     0  000000    0000 000011225678888  67788777665                       


Q ss_pred             ----------eEEEecCCC-CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-----CCcEEEEEcC
Q psy10348        193 ----------CIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-----SGRTYVWDLD  256 (291)
Q Consensus       193 ----------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-----dg~i~vwd~~  256 (291)
                                .|.+||+.+ ++..          .+.....+...+..++  + |||++|++++.     +..|++||+.
T Consensus       254 ~~~g~~~~~~~l~~~d~~~~~~~~----------~~~~~~~~~~~~~~~~--~-pDg~~l~~~~~~~~~~~~~i~~~d~~  320 (741)
T 2ecf_A          254 PAAGDANVQVKLGVISPAEQAQTQ----------WIDLGKEQDIYLARVN--W-RDPQHLSFQRQSRDQKKLDLVEVTLA  320 (741)
T ss_dssp             CBTTSCCCEEEEEEECSSTTCCCE----------EECCCSCSSEEEEEEE--E-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred             CCCCCCCCeeEEEEEECCCCCceE----------EecCCCCcceEEEEEE--e-CCCCEEEEEEecccCCeEEEEEEECC
Confidence                      788899877 6431          1111112444455544  4 55999987754     5789999999


Q ss_pred             CCCCCcceeEEEecc--ccccceeeeEEccCCceee
Q psy10348        257 VQDPSSIKFQILSHP--RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       257 ~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++.    ...+...  .....+.+++|+|||++++
T Consensus       321 ~g~~----~~~~~~~~~~~~~~~~~~~~spdg~~~~  352 (741)
T 2ecf_A          321 SNQQ----RVLAHETSPTWVPLHNSLRFLDDGSILW  352 (741)
T ss_dssp             TCCE----EEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred             CCce----EEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence            8853    2222211  1111457899999999765

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.91  E-value=1.5e-22  Score=168.70  Aligned_cols=243  Identities=13%  Similarity=0.048  Sum_probs=175.2

Q ss_pred             eeeecceeEEEEeee----ccCCCCCEEEEec-CCCeEEEEccCCcceeEEEee----------ecc-ceeEEEEecCCC
Q psy10348          6 SLLIEENFYTCAWSM----DLESGRPLLAVAG-SRAVIRIFSPAFHACVRHFYG----------HGH-AINELKFHPQDF   69 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~----~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~   69 (291)
                      .+.+......++|+|    ++    +++++++ .+++|.+||..++++++.+..          |.+ .+.++.++|+++
T Consensus       217 ~i~~g~~p~~va~sp~~~~dg----~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~  292 (543)
T 1nir_A          217 EIKIGIEARSVESSKFKGYED----RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP  292 (543)
T ss_dssp             EEECCSEEEEEEECCSTTCTT----TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred             EEecCCCcceEEeCCCcCCCC----CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCC
Confidence            344567789999999    88    5888887 489999999999999988864          223 688999999666


Q ss_pred             cEEEEeecCCeEEEEECCCcceee--eeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhcccccc
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIA--IFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      .++++...++.|.+||+.+++.+.  .+    .+...+.++.|+|+|++|++++ .+++|.+||+.+++++..+...  .
T Consensus       293 ~~~vs~~~~g~i~vvd~~~~~~l~~~~i----~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g--~  366 (543)
T 1nir_A          293 EFIVNVKETGKVLLVNYKDIDNLTVTSI----GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG--K  366 (543)
T ss_dssp             EEEEEETTTTEEEEEECTTSSSCEEEEE----ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS--S
T ss_pred             EEEEEECCCCeEEEEEecCCCcceeEEe----ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC--C
Confidence            777888889999999998776544  33    4566788999999999877655 5899999999999876554310  0


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFK  223 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  223 (291)
                                            ..|......+...  +..++++. .|++|.+||+.+....     ....+.++++..+
T Consensus       367 ----------------------~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~-----~~~~~~v~~l~~~  419 (543)
T 1nir_A          367 ----------------------TPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP-----QYAWKKVAELQGQ  419 (543)
T ss_dssp             ----------------------SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECS
T ss_pred             ----------------------CCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCc-----hhcCeEEEEEEcC
Confidence                                  0143322233221  44666665 5899999999872110     0011557888887


Q ss_pred             cccEEEEEEEecCCCcEEEEEc-------CCCcEEEEEcCCCCCCcceeEEEe------ccccccceeeeEEccCCceee
Q psy10348        224 DCEIWFIRFSMDYWQKILAVGN-------QSGRTYVWDLDVQDPSSIKFQILS------HPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       224 ~~~i~~~~~~~~~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ...+..++  ++|++++|++++       .+++|.|||+.+.+...   ..+.      ...+...+..++|+|||+.|.
T Consensus       420 g~~~~~v~--~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~  494 (543)
T 1nir_A          420 GGGSLFIK--THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY---QVLPIAEWADLGEGAKRVVQPEYNKRGDEVW  494 (543)
T ss_dssp             CSCCCCEE--CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCC---EEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred             CCCceEEE--cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCe---EEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence            76655544  567899999997       37799999999987542   2221      123457899999999999886

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=3.2e-22  Score=157.27  Aligned_cols=223  Identities=8%  Similarity=-0.016  Sum_probs=152.6

Q ss_pred             EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CCeEEEEECCCcce-eee
Q psy10348         17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTLRLWNIKTDIC-IAI   94 (291)
Q Consensus        17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~-~~~   94 (291)
                      .|.++.+   ..+++++.++.|++||+++++.+..+..+...+ .++|+| +++++++++. ++.|.+||+.+++. ...
T Consensus         4 ~~~~~~~---~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~   78 (331)
T 3u4y_A            4 MFQTTSN---FGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVA   78 (331)
T ss_dssp             ---CCCC---EEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred             eEcCCCC---EEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence            3444443   468888899999999999999988887666677 999999 7776665554 88999999998887 555


Q ss_pred             eccccCCCCceEEEEEccCCCEEEEEecCC---cEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc
Q psy10348         95 FGGVEGHRDEVLSADFDLLGTKIMSCGMDH---SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH  171 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (291)
                      +   ..+..+..+++|+|++++++++..++   .|.+||+.+++.+..+.                             .
T Consensus        79 ~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-----------------------------~  126 (331)
T 3u4y_A           79 I---QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-----------------------------I  126 (331)
T ss_dssp             E---EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-----------------------------C
T ss_pred             c---ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-----------------------------C
Confidence            5   45555555599999999999655553   89999999887654432                             2


Q ss_pred             CcceeEEEEc--CCEE-EEecCCCe-EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cC
Q psy10348        172 RNYVDCVRWL--GDFV-LSKSCENC-IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQ  246 (291)
Q Consensus       172 ~~~v~~~~~~--~~~l-~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~  246 (291)
                      .....+++|+  ++++ ++...++. |.+|++........       .....+. .....  ..+.++|+|++++++ ..
T Consensus       127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~-------~~~~~~~-~~~~~--~~~~~spdg~~l~v~~~~  196 (331)
T 3u4y_A          127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD-------TGQEFIS-GGTRP--FNITFTPDGNFAFVANLI  196 (331)
T ss_dssp             CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE-------EEEEEEC-SSSSE--EEEEECTTSSEEEEEETT
T ss_pred             CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee-------cCCcccc-CCCCc--cceEECCCCCEEEEEeCC
Confidence            3345788998  5544 44455678 99999875432100       0011111 22223  345667889866554 57


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++.|++||+.+++... ....+.   ....+..++|+|||++|+
T Consensus       197 ~~~v~v~d~~~~~~~~-~~~~~~---~~~~~~~~~~spdg~~l~  236 (331)
T 3u4y_A          197 GNSIGILETQNPENIT-LLNAVG---TNNLPGTIVVSRDGSTVY  236 (331)
T ss_dssp             TTEEEEEECSSTTSCE-EEEEEE---CSSCCCCEEECTTSSEEE
T ss_pred             CCeEEEEECCCCcccc-eeeecc---CCCCCceEEECCCCCEEE
Confidence            8999999999876411 122232   235778999999999764

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=5.3e-21  Score=151.54  Aligned_cols=226  Identities=11%  Similarity=0.036  Sum_probs=163.8

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecC-------CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCc-EEEEeec
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGS-------RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN-LLLSVSK   77 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~   77 (291)
                      .......+..++|+|++.    ++++++.       ++.|.+||..+++.+..+.. ...+..++|+| +++ ++++...
T Consensus        36 ~~~~~~~~~~~~~s~dg~----~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~  109 (353)
T 3vgz_A           36 RKAVGKGAYEMAYSQQEN----ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINN-TTQTLWFGNTV  109 (353)
T ss_dssp             EEEEESSEEEEEEETTTT----EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEET-TTTEEEEEETT
T ss_pred             hhhhccCccceEECCCCC----EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECC-CCCEEEEEecC
Confidence            445567888999999984    6776653       57899999999998888874 45578999999 777 4555566


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCC---------ceEEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhcccccc
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRD---------EVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      ++.|.+||..+++.+..+.   .+..         .+.+++|+|+++++++++  .++.|.+||+.+++....+.     
T Consensus       110 ~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-----  181 (353)
T 3vgz_A          110 NSAVTAIDAKTGEVKGRLV---LDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-----  181 (353)
T ss_dssp             TTEEEEEETTTCCEEEEEE---SCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-----
T ss_pred             CCEEEEEeCCCCeeEEEEe---cCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-----
Confidence            7999999999998877763   2221         278999999999887776  47889999999887654432     


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--  222 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--  222 (291)
                                             .+...+..++|+  ++++++++.++.|.+||+.+.+.            +..+..  
T Consensus       182 -----------------------~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~------------~~~~~~~~  226 (353)
T 3vgz_A          182 -----------------------NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI------------LSRKKLLD  226 (353)
T ss_dssp             -----------------------CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE------------EEEEECCC
T ss_pred             -----------------------CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE------------EEEEEcCC
Confidence                                   123335677786  77888888999999999988744            333332  


Q ss_pred             --CcccEEEEEEEecCCCcEEEEEcC-CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        223 --KDCEIWFIRFSMDYWQKILAVGNQ-SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       223 --~~~~i~~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                        +...+..  ++++|+++++++++. ++.|.+||+.+++..    ..+.. +   ....++|+|+|++|+
T Consensus       227 ~~~~~~~~~--~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~-~---~~~~~~~s~dg~~l~  287 (353)
T 3vgz_A          227 DGKEHFFIN--ISLDTARQRAFITDSKAAEVLVVDTRNGNIL----AKVAA-P---ESLAVLFNPARNEAY  287 (353)
T ss_dssp             SSSCCCEEE--EEEETTTTEEEEEESSSSEEEEEETTTCCEE----EEEEC-S---SCCCEEEETTTTEEE
T ss_pred             CCCCcccce--EEECCCCCEEEEEeCCCCEEEEEECCCCcEE----EEEEc-C---CCceEEECCCCCEEE
Confidence              2233333  455577997777664 599999999887532    23332 1   236799999999654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.91  E-value=1.6e-21  Score=154.28  Aligned_cols=239  Identities=10%  Similarity=-0.004  Sum_probs=152.7

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecC--CCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEee-cCCeEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGS--RAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVS-KDHTLR   82 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~--dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~   82 (291)
                      .+......++|+|++    ++++++..  ++.|++|++.+++  .+..+..+...+..++|+| ++++|++++ .++.|.
T Consensus        37 ~~~~~p~~~a~spdg----~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~  111 (347)
T 3hfq_A           37 AATQNPTYLALSAKD----CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAE  111 (347)
T ss_dssp             EECSCCCCEEECTTC----EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEE
T ss_pred             eccCCcceEEEccCC----eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEE
Confidence            345667789999988    44444432  6899999997665  4445556778899999999 888888877 679999


Q ss_pred             EEECCC-cc--eeeeeccccC-------CCCceEEEEEccCCCEEEEEecCCcEEEEecc-CchhhhhhccccccCCCCc
Q psy10348         83 LWNIKT-DI--CIAIFGGVEG-------HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-KPEIKDACAESYTFNPARS  151 (291)
Q Consensus        83 vwd~~~-~~--~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~  151 (291)
                      +|++.. +.  .+..+.. .+       ....+.+++|+|+|+++++...++.|++||+. +++......  ..      
T Consensus       112 v~~~~~~g~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~--~~------  182 (347)
T 3hfq_A          112 VMKIAADGALTLTDTVQH-SGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSV--LT------  182 (347)
T ss_dssp             EEEECTTSCEEEEEEEEC-CCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEE--EE------
T ss_pred             EEEeCCCCCeeecceeec-CCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeee--EE------
Confidence            999963 22  2222210 11       22358899999999966666668899999998 333211000  00      


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc--CCEEE-EecCCCeEEEecCCC--CCccccccCCCceeeeeeecCCcc-
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVL-SKSCENCIICWKPGR--LEDKELRTNETNVTIINRLNFKDC-  225 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~-  225 (291)
                                       .........++|+  |++++ ++..++.|.+|++..  ++.          ..+..+..... 
T Consensus       183 -----------------~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~----------~~~~~~~~~~~~  235 (347)
T 3hfq_A          183 -----------------MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF----------TQLGIVKTIPAD  235 (347)
T ss_dssp             -----------------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE----------EEEEEEESSCTT
T ss_pred             -----------------cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce----------EEeeeeeecCCC
Confidence                             0012245678898  66454 466789999999874  221          11222222111 


Q ss_pred             ---cEEEEEEEecCCCcEEEE-EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        226 ---EIWFIRFSMDYWQKILAV-GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       226 ---~i~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                         ......++++|||++|++ ...++.|.+|++.....   .........+...+.+++|+|||++|+
T Consensus       236 ~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~---~~~~~~~~~~~~~~~~~~~spdg~~l~  301 (347)
T 3hfq_A          236 YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH---LTLIQQISTEGDFPRDFDLDPTEAFVV  301 (347)
T ss_dssp             CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC---EEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred             CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc---EEEeEEEecCCCCcCeEEECCCCCEEE
Confidence               123445667788998854 55689999999974321   112222223445688999999999876

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.91  E-value=1.9e-23  Score=180.87  Aligned_cols=245  Identities=9%  Similarity=-0.002  Sum_probs=158.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc---ceeEEEEecCCCcEEEEeecC---------
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH---AINELKFHPQDFNLLLSVSKD---------   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d---------   78 (291)
                      ....+++|+|++    +++++ +.||.|++||+.+++....+..|..   .|.+++|+| ++++|++++.+         
T Consensus        17 ~~~~~~~~spdg----~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~   90 (723)
T 1xfd_A           17 IHDPEAKWISDT----EFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYT   90 (723)
T ss_dssp             CCCCCCCBSSSS----CBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCC
T ss_pred             ccccccEEcCCC----cEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecce
Confidence            346788999998    46666 7899999999999988877776654   499999999 99999998764         


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      +.+.+||+.+++. ..+.....|...+..++|+|+|+.|++++. +.|++||+.+++.........     .. ..+.  
T Consensus        91 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-----~~-~~~~--  160 (723)
T 1xfd_A           91 GYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-----EG-VIYN--  160 (723)
T ss_dssp             SEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB-----TT-TEEE--
T ss_pred             eeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC-----CC-ceEC--
Confidence            7888999998876 334222455666889999999999999885 799999998876543221100     00 0000  


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCC----------------------------------CeEEEecCCCC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE----------------------------------NCIICWKPGRL  202 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d----------------------------------~~i~iwd~~~~  202 (291)
                       +....+. .+.-...+.+++|+  |++|++++.|                                  ..|.+||+.++
T Consensus       161 -g~~~~v~-~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~  238 (723)
T 1xfd_A          161 -GLSDWLY-EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP  238 (723)
T ss_dssp             -EECCHHH-HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred             -cccceeE-EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence             0000000 00000123567776  5566666543                                  27888988776


Q ss_pred             CccccccCCCceeeeeeecCCc----ccEEEEEEEecCCCcEEEEEcC----CCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348        203 EDKELRTNETNVTIINRLNFKD----CEIWFIRFSMDYWQKILAVGNQ----SGRTYVWDLDVQDPSSIKFQILSHPRCM  274 (291)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~  274 (291)
                      +.            ...+..+.    ..-....++++|||++|++...    +..|++||+.+++..    ..+.. .+.
T Consensus       239 ~~------------~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~-~~~  301 (723)
T 1xfd_A          239 TH------------DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT----KKHED-ESE  301 (723)
T ss_dssp             CC------------CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE----EEEEE-ECS
T ss_pred             ce------------eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce----EEEEe-ccC
Confidence            43            12222210    1223345667788999877653    367999999987531    22221 222


Q ss_pred             cce----eeeEEccCCceee
Q psy10348        275 SAV----RQTTLSKNGNVLL  290 (291)
Q Consensus       275 ~~v----~~~~~s~~g~~l~  290 (291)
                      +.+    ..++|||||+.|+
T Consensus       302 ~~~~~~~~~~~~spdg~~l~  321 (723)
T 1xfd_A          302 AWLHRQNEEPVFSKDGRKFF  321 (723)
T ss_dssp             SCCCCCCCCCEECTTSCSEE
T ss_pred             CEEeccCCCceEcCCCCeEE
Confidence            333    3789999999775

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.90  E-value=1.6e-21  Score=153.29  Aligned_cols=233  Identities=11%  Similarity=0.094  Sum_probs=155.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEe-cCCCeEEEEccCCcce-eEEEeeeccceeEEEEecCCCcEEEEeecCC---eEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVA-GSRAVIRIFSPAFHAC-VRHFYGHGHAINELKFHPQDFNLLLSVSKDH---TLRLW   84 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vw   84 (291)
                      .... +++|+|++.    +++++ ..++.|.+||+.+++. ...+..+..+..+++|+| ++++++++..++   .|.+|
T Consensus        40 ~~~~-~~~~s~dg~----~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~  113 (331)
T 3u4y_A           40 YDFV-DTAITSDCS----NVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSY  113 (331)
T ss_dssp             CCEE-EEEECSSSC----EEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEE
T ss_pred             CCcc-eEEEcCCCC----EEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEE
Confidence            4455 999999984    55555 4589999999999987 777777766666699999 888888665553   89999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCc-EEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHS-LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      |+.+++.+..+    .......+++|+|+|++++++ ..++. +.+|++.....+.....                    
T Consensus       114 d~~~~~~~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~--------------------  169 (331)
T 3u4y_A          114 SFLKNKFISTI----PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQ--------------------  169 (331)
T ss_dssp             ETTTTEEEEEE----ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEE--------------------
T ss_pred             ECCCCCeEEEE----ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCC--------------------
Confidence            99999888776    234556899999999866655 44588 99999875432211100                    


Q ss_pred             cccccccccCcceeEEEEc--CCE-EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDF-VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                         .. .........++|+  +++ ++++..++.|.+||+.+++..         ..+..+.... .+.  .++++|+|+
T Consensus       170 ---~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~---------~~~~~~~~~~-~~~--~~~~spdg~  233 (331)
T 3u4y_A          170 ---EF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI---------TLLNAVGTNN-LPG--TIVVSRDGS  233 (331)
T ss_dssp             ---EE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC---------EEEEEEECSS-CCC--CEEECTTSS
T ss_pred             ---cc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc---------ceeeeccCCC-CCc--eEEECCCCC
Confidence               00 0123346788898  664 455567899999999876541         1133333322 222  355678899


Q ss_pred             EEEEEc-CCCcEEEEEcCCCCCCcceeEEEec-----cccccceeeeEEccCCceee
Q psy10348        240 ILAVGN-QSGRTYVWDLDVQDPSSIKFQILSH-----PRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       240 ~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|++++ .++.|.+||+.+++..  ....+..     .........++|+|||++|+
T Consensus       234 ~l~v~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~  288 (331)
T 3u4y_A          234 TVYVLTESTVDVFNFNQLSGTLS--FVKSFGHGLLIDPRPLFGANQMALNKTETKLF  288 (331)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEE--EEEEEECCCCCCCGGGTTCCCEEECTTSSEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcee--eecccccccccCCCCcccccceEECCCCCEEE
Confidence            776665 5788999999987431  0111111     11112235689999999875

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=8.8e-22  Score=151.94  Aligned_cols=206  Identities=11%  Similarity=0.009  Sum_probs=146.2

Q ss_pred             EecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-cceeeeeccccCC-CCceEEE
Q psy10348         31 VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-DICIAIFGGVEGH-RDEVLSA  108 (291)
Q Consensus        31 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~-~~~i~~~  108 (291)
                      .++.++.|++||+.+++.. .+..|...|.+++|+| ++++|++++ ++.|.+||+.+ ++.....   ..+ ...+.++
T Consensus        17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~   90 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVD---TGFATICNNDH   90 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECC---CTTCCCBCSCC
T ss_pred             CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEec---cccccccccce
Confidence            3467899999999988765 4556899999999999 889999876 78999999998 7766555   344 4778999


Q ss_pred             EEccCCCEEEEEe--cCCcEEEEecc--CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        109 DFDLLGTKIMSCG--MDHSLKLWDLT--KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       109 ~~~~~~~~l~~~~--~d~~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      +|+|++++|++++  .++...+|.++  +++. ..+.                             +...+..++|+  +
T Consensus        91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~-----------------------------~~~~~~~~~~spdg  140 (297)
T 2ojh_A           91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT-----------------------------KNLPSYWHGWSPDG  140 (297)
T ss_dssp             EECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC-----------------------------SSSSEEEEEECTTS
T ss_pred             EECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee-----------------------------cCCCccceEECCCC
Confidence            9999999999998  44566666654  3321 1111                             22237788898  6


Q ss_pred             CEEE-EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCCC
Q psy10348        183 DFVL-SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQDP  260 (291)
Q Consensus       183 ~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~  260 (291)
                      ++|+ ++..++.+++|++......           ...+..+...+..  +.++|++++|+.++ .++.+++|++.....
T Consensus       141 ~~l~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~  207 (297)
T 2ojh_A          141 KSFTYCGIRDQVFDIYSMDIDSGV-----------ETRLTHGEGRNDG--PDYSPDGRWIYFNSSRTGQMQIWRVRVDGS  207 (297)
T ss_dssp             SEEEEEEEETTEEEEEEEETTTCC-----------EEECCCSSSCEEE--EEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred             CEEEEEECCCCceEEEEEECCCCc-----------ceEcccCCCcccc--ceECCCCCEEEEEecCCCCccEEEECCCCC
Confidence            6665 7788999999986432211           3344444555554  45567799887766 589999999873221


Q ss_pred             CcceeEEEeccccccceeeeEEccCCceee
Q psy10348        261 SSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                           .......+...+.+++|+|+|++|+
T Consensus       208 -----~~~~~~~~~~~~~~~~~s~dg~~l~  232 (297)
T 2ojh_A          208 -----SVERITDSAYGDWFPHPSPSGDKVV  232 (297)
T ss_dssp             -----CEEECCCCSEEEEEEEECTTSSEEE
T ss_pred             -----CcEEEecCCcccCCeEECCCCCEEE
Confidence                 1122234567899999999999886

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.89  E-value=5.4e-21  Score=150.42  Aligned_cols=221  Identities=10%  Similarity=0.085  Sum_probs=148.9

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeecc--ceeEEEEecCCCcE-EEEeecCCeEEEEECCCcceeeeeccccCC--
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGH--AINELKFHPQDFNL-LLSVSKDHTLRLWNIKTDICIAIFGGVEGH--  101 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~--  101 (291)
                      .++++++.++.|++||+.+++.+..+.....  .+..++|+| +++. ++++..++.|.+||+.+++.+..+.  ..+  
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--~~~~~   78 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRID--LSTPE   78 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEE--CCBTT
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEE--cCCcc
Confidence            4899999999999999999998887763322  588999999 7755 4566668899999999988877662  122  


Q ss_pred             --CCceEEEEEccCCCEEEEEe------------cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348        102 --RDEVLSADFDLLGTKIMSCG------------MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus       102 --~~~i~~~~~~~~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                        ...+.+++|+|+|++++++.            .++.|.+||+.+++....+.                          
T Consensus        79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--------------------------  132 (337)
T 1pby_B           79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--------------------------  132 (337)
T ss_dssp             EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--------------------------
T ss_pred             cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe--------------------------
Confidence              22677899999999988886            57999999998877554332                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC---c------ee---------------------
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET---N------VT---------------------  215 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~------~~---------------------  215 (291)
                         ....+.+++|+  +++++++  ++.|.+||+.+++.........   .      ..                     
T Consensus       133 ---~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~  207 (337)
T 1pby_B          133 ---APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK  207 (337)
T ss_dssp             ---CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred             ---CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence               12235566776  5566666  5778888887654331110000   0      00                     


Q ss_pred             ------------eeeeecCCcccE----------EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc
Q psy10348        216 ------------IINRLNFKDCEI----------WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC  273 (291)
Q Consensus       216 ------------~~~~~~~~~~~i----------~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  273 (291)
                                  .+..+......+          ....++++|++++++++  ++.|++||+.+++.    ...+..   
T Consensus       208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~----~~~~~~---  278 (337)
T 1pby_B          208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS----IKRVPL---  278 (337)
T ss_dssp             TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE----EEEEEC---
T ss_pred             ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC----cceecC---
Confidence                        011111111110          12235677889999988  78999999988742    223322   


Q ss_pred             ccceeeeEEccCCceee
Q psy10348        274 MSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~  290 (291)
                      ...+.+++|+|||++|+
T Consensus       279 ~~~~~~~~~s~dg~~l~  295 (337)
T 1pby_B          279 PHSYYSVNVSTDGSTVW  295 (337)
T ss_dssp             SSCCCEEEECTTSCEEE
T ss_pred             CCceeeEEECCCCCEEE
Confidence            24678999999999875

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.89  E-value=1.6e-20  Score=147.67  Aligned_cols=222  Identities=9%  Similarity=0.022  Sum_probs=155.8

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEee----------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVS----------   76 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~----------   76 (291)
                      .+.+++|+|++.   .+++++..++.|.+||+.+++.+..+..     |...+..++|+| +++++++++          
T Consensus        35 ~~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~  110 (337)
T 1pby_B           35 TPMVPMVAPGGR---IAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHF  110 (337)
T ss_dssp             CCCCEEECTTSS---EEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCE
T ss_pred             CccceEEcCCCC---EEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC-CCCEEEEEecccccccccc
Confidence            578999999984   3456667789999999999988877763     223678999999 888888876          


Q ss_pred             --cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----ccccCCC
Q psy10348         77 --KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----SYTFNPA  149 (291)
Q Consensus        77 --~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~~  149 (291)
                        .++.|.+||+.+++.+..+   . ....+.+++|+|++++|+++  ++.|.+||+.+++....+..     ...+.|+
T Consensus       111 ~~~~~~i~v~d~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d  184 (337)
T 1pby_B          111 EVQPTRVALYDAETLSRRKAF---E-APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD  184 (337)
T ss_dssp             EECCCEEEEEETTTTEEEEEE---E-CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred             cccCceEEEEECCCCcEEEEE---e-CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence              5799999999988877776   2 24567889999999988888  68999999998876544332     2244444


Q ss_pred             CccccccCccccC------------------------cc---------cccccccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348        150 RSTRPFDTQKEHF------------------------PQ---------FSTRDIHRNYVDCVRWL--GDFVLSKSCENCI  194 (291)
Q Consensus       150 ~~~~~~~~~~~~~------------------------~~---------~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i  194 (291)
                      +............                        ..         ......+...+.+++|+  +++++++  ++.|
T Consensus       185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v  262 (337)
T 1pby_B          185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL  262 (337)
T ss_dssp             CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred             ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence            4332221110000                        00         00112234456678898  6677777  7999


Q ss_pred             EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      .+||+.+++.            +..+.... .+.  .++++|++++|++++.++.|++||+.+++.
T Consensus       263 ~~~d~~~~~~------------~~~~~~~~-~~~--~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~  313 (337)
T 1pby_B          263 ESFDLEKNAS------------IKRVPLPH-SYY--SVNVSTDGSTVWLGGALGDLAAYDAETLEK  313 (337)
T ss_dssp             EEEETTTTEE------------EEEEECSS-CCC--EEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred             EEEECCCCcC------------cceecCCC-cee--eEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence            9999987643            34443332 233  356678899999999999999999998853

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.89  E-value=1.3e-21  Score=168.94  Aligned_cols=226  Identities=8%  Similarity=0.062  Sum_probs=157.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC--
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT--   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--   88 (291)
                      ..|.+++|||+ .    .++.+ .++.|++||+.+++... +..+...+..++|+| +++.|+.+ .|+.|++||+.+  
T Consensus        82 ~~v~~~~~spd-~----~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~  152 (706)
T 2z3z_A           82 FPSFRTLDAGR-G----LVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLG  152 (706)
T ss_dssp             CCCEEEEETTT-T----EEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTT
T ss_pred             cCceeEEECCC-C----eEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCccc
Confidence            56999999999 4    45444 35999999999887544 445677899999999 89999885 689999999998  


Q ss_pred             ---cceeeeeccccCCCCc--------------eEEEEEccCCCEEEEEe------------------------------
Q psy10348         89 ---DICIAIFGGVEGHRDE--------------VLSADFDLLGTKIMSCG------------------------------  121 (291)
Q Consensus        89 ---~~~~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~------------------------------  121 (291)
                         ++.....   ..+...              +.++.|+|+|++|++++                              
T Consensus       153 ~~~g~~~~~~---~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g  229 (706)
T 2z3z_A          153 EGMSRAIAVT---IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG  229 (706)
T ss_dssp             SCCCCCEESC---SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred             ccCCCcEEec---cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence               7765544   233332              48899999999999987                              


Q ss_pred             ---cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC----
Q psy10348        122 ---MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN----  192 (291)
Q Consensus       122 ---~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~----  192 (291)
                         .+..|++||+.+++......                          ...|...+.+++|+  |++|++++.++    
T Consensus       230 ~~~~~~~l~~~d~~~~~~~~~~~--------------------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~  283 (706)
T 2z3z_A          230 TPSHHVTVGIYHLATGKTVYLQT--------------------------GEPKEKFLTNLSWSPDENILYVAEVNRAQNE  283 (706)
T ss_dssp             SCCCEEEEEEEETTTTEEEECCC--------------------------CSCTTCEEEEEEECTTSSEEEEEEECTTSCE
T ss_pred             CCCCeeEEEEEECCCCceEeecc--------------------------CCCCceeEeeEEEECCCCEEEEEEeCCCCCe
Confidence               34678889988766322110                          01366779999998  77888877665    


Q ss_pred             -eEEEecCCCCCccccccCCCceeeeeeecCCcccE-EEEEEEecC--CCcEEEEEcCCCcEEEEEcC-CCCCCcceeEE
Q psy10348        193 -CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI-WFIRFSMDY--WQKILAVGNQSGRTYVWDLD-VQDPSSIKFQI  267 (291)
Q Consensus       193 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~  267 (291)
                       .|.+||+.+++..         ..+.... +...+ ....+.++|  ||+++++++.||.+++|.+. ++.    ....
T Consensus       284 ~~v~~~d~~~g~~~---------~~~~~~~-~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~----~~~~  349 (706)
T 2z3z_A          284 CKVNAYDAETGRFV---------RTLFVET-DKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR----LIRQ  349 (706)
T ss_dssp             EEEEEEETTTCCEE---------EEEEEEE-CSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC----EEEE
T ss_pred             eEEEEEECCCCcee---------eEEEEcc-CCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC----EEEe
Confidence             9999999887321         1111111 11100 001235567  89999999999999999887 332    1222


Q ss_pred             Eeccccccceee-eEEccCCceee
Q psy10348        268 LSHPRCMSAVRQ-TTLSKNGNVLL  290 (291)
Q Consensus       268 ~~~~~~~~~v~~-~~~s~~g~~l~  290 (291)
                      +  ..+...+.+ ++|+|||+.|+
T Consensus       350 l--~~~~~~v~~~~~~spdg~~l~  371 (706)
T 2z3z_A          350 V--TKGEWEVTNFAGFDPKGTRLY  371 (706)
T ss_dssp             C--CCSSSCEEEEEEECTTSSEEE
T ss_pred             c--CCCCeEEEeeeEEcCCCCEEE
Confidence            2  345566776 79999998875

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.88  E-value=2.2e-20  Score=147.35  Aligned_cols=216  Identities=9%  Similarity=0.033  Sum_probs=141.1

Q ss_pred             EEEEecCCCeEEEEccC-Cc--ceeEEEeeeccceeEEEEecCCCcEEEEeecC-CeEEEEECC--Ccce--eeeecccc
Q psy10348         28 LLAVAGSRAVIRIFSPA-FH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-HTLRLWNIK--TDIC--IAIFGGVE   99 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~--~~~~--~~~~~~~~   99 (291)
                      ++++++.++.|++|+++ ++  +.+..+ .+...+.+++|+| ++++|++++.+ +.|.+|++.  +++.  +..+   .
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~   81 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES---A   81 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE---E
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeecccc---c
Confidence            45555889999999985 33  233333 4677899999999 88888888876 999999997  4443  2333   3


Q ss_pred             CCCCceEEEEEccCCCEEEEEec-CCcEEEEeccC---chhhhhhccccccCCCCccccccCccccCcccccccccCcce
Q psy10348        100 GHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTK---PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV  175 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  175 (291)
                      .+ ..+..++|+|++++|++++. ++.|.+||+..   .+....+.                             ....+
T Consensus        82 ~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------------------------~~~~~  131 (343)
T 1ri6_A           82 LP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-----------------------------GLDGC  131 (343)
T ss_dssp             CS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-----------------------------CCTTB
T ss_pred             cC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-----------------------------CCCCc
Confidence            33 37889999999998877665 88999999952   22221111                             22347


Q ss_pred             eEEEEc--CCEEEEec-CCCeEEEecCCC-CCccccccCCCceeeee--eecCC-cccEEEEEEEecCCCcEEEEE-cCC
Q psy10348        176 DCVRWL--GDFVLSKS-CENCIICWKPGR-LEDKELRTNETNVTIIN--RLNFK-DCEIWFIRFSMDYWQKILAVG-NQS  247 (291)
Q Consensus       176 ~~~~~~--~~~l~~~~-~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~--~~~~~-~~~i~~~~~~~~~~~~~l~~~-~~d  247 (291)
                      .+++|+  ++++++++ .++.|.+||+.. ++.          ..+.  ....+ ...+.  .++++|++++++++ ..+
T Consensus       132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~----------~~~~~~~~~~~~~~~~~--~~~~~pdg~~l~~~~~~~  199 (343)
T 1ri6_A          132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHL----------VAQDPAEVTTVEGAGPR--HMVFHPNEQYAYCVNELN  199 (343)
T ss_dssp             CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE----------EEEEEEEEECSTTCCEE--EEEECTTSSEEEEEETTT
T ss_pred             eEEEECCCCCEEEEecCCCCEEEEEEecCCCce----------eeecccccccCCCCCcc--eEEECCCCCEEEEEeCCC
Confidence            788888  66677666 899999999976 322          1111  22221 22333  35667889977655 488


Q ss_pred             CcEEEEEcCCCCCCcceeEEEe-cc-c--cccceeeeEEccCCceee
Q psy10348        248 GRTYVWDLDVQDPSSIKFQILS-HP-R--CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~~~~~~~-~~-~--~~~~v~~~~~s~~g~~l~  290 (291)
                      +.|.+|++.............. .. +  ....+.+++|+|+|++|+
T Consensus       200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~  246 (343)
T 1ri6_A          200 SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY  246 (343)
T ss_dssp             TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred             CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence            9999999964221111112222 11 1  123566899999998875

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.88  E-value=8.2e-21  Score=150.18  Aligned_cols=230  Identities=10%  Similarity=-0.035  Sum_probs=152.8

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceee
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIA   93 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~   93 (291)
                      +++++++    .++++++.++.|++||+.+++.+..+..+. ..+..++|+| +++++ +++..++.|.+||+.+++...
T Consensus         5 ~~~~~~~----~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~   79 (349)
T 1jmx_B            5 PALKAGH----EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTF   79 (349)
T ss_dssp             CCCCTTC----EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             ccccCCC----EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence            3455555    589999999999999999999888887543 2578999999 77654 555678999999999988776


Q ss_pred             eeccccCC-----CCceEEEEEccCCCEEEEEecC------------CcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348         94 IFGGVEGH-----RDEVLSADFDLLGTKIMSCGMD------------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        94 ~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      .+.  ..+     ...+..++|+|+|++|++++.+            +.|.+||+.+++.......              
T Consensus        80 ~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--------------  143 (349)
T 1jmx_B           80 HAN--LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT--------------  143 (349)
T ss_dssp             EEE--SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--------------
T ss_pred             EEE--cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee--------------
Confidence            662  122     2347889999999999998865            8999999988654322110              


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC---c-----------------e
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET---N-----------------V  214 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~-----------------~  214 (291)
                                  ..+...+.+++|+  ++ +++++.  .|.+||+.+++.........   .                 .
T Consensus       144 ------------~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (349)
T 1jmx_B          144 ------------FPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH  208 (349)
T ss_dssp             ------------EECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred             ------------ccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcce
Confidence                        0123357788887  55 555443  49999998776432111110   0                 0


Q ss_pred             ---e--eeee-------------------ecCCcccE----------EEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        215 ---T--IINR-------------------LNFKDCEI----------WFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       215 ---~--~~~~-------------------~~~~~~~i----------~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                         .  .+..                   +......+          ....++++| ++++++++  ++.|.+||+.+++
T Consensus       209 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~  286 (349)
T 1jmx_B          209 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK  286 (349)
T ss_dssp             EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE
T ss_pred             eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe
Confidence               0  0000                   00000000          122345668 89999988  8899999999874


Q ss_pred             CCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        260 PSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       260 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .    ...+..   ...+.+++|+|||++|+
T Consensus       287 ~----~~~~~~---~~~~~~~~~s~dg~~l~  310 (349)
T 1jmx_B          287 L----IKAANL---DHTYYCVAFDKKGDKLY  310 (349)
T ss_dssp             E----EEEEEC---SSCCCEEEECSSSSCEE
T ss_pred             E----EEEEcC---CCCccceEECCCCCEEE
Confidence            2    233322   23578999999998876

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.87  E-value=1e-20  Score=169.76  Aligned_cols=217  Identities=12%  Similarity=0.078  Sum_probs=165.2

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----------eccceeEEEEe-cCCCcEEEEeecC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----------HGHAINELKFH-PQDFNLLLSVSKD   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~~l~s~~~d   78 (291)
                      ..+...+|+|++.    .|+.+ .++.|++|++...+ +..+..           |...+..++|+ | +++.|++++ +
T Consensus       245 ~~~~~~~~SpDG~----~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~  316 (1045)
T 1k32_A          245 TDYYPRHLNTDGR----RILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-R  316 (1045)
T ss_dssp             CSSCEEEEEESSS----CEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-T
T ss_pred             CCcceeeEcCCCC----EEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-c
Confidence            3466789999984    77776 58999999985443 334443           45579999999 9 899998887 7


Q ss_pred             CeEEEEECCCcceeeeeccccCCCC-ceEEEEEccCCCEEEEEecCCcEE-EEeccCchhhhhhccccccCCCCcccccc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRD-EVLSADFDLLGTKIMSCGMDHSLK-LWDLTKPEIKDACAESYTFNPARSTRPFD  156 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~~i~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (291)
                      +.|.+|++..+.... +   ..|.. .+..++|+ +|+.|++++.++.+. +||+.+++....                 
T Consensus       317 ~~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l-----------------  374 (1045)
T 1k32_A          317 GQAFIQDVSGTYVLK-V---PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF-----------------  374 (1045)
T ss_dssp             TEEEEECTTSSBEEE-C---SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-----------------
T ss_pred             CEEEEEcCCCCceEE-c---cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe-----------------
Confidence            899999998776544 3   46777 89999999 999999998888888 889876643211                 


Q ss_pred             CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                                  ..|...+..++|+  |++|++++.++.|++||+.+++.            ......+...+..  +++
T Consensus       375 ------------~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~------------~~~~~~~~~~v~~--~~~  428 (1045)
T 1k32_A          375 ------------EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP------------TVIERSREAMITD--FTI  428 (1045)
T ss_dssp             ------------CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE------------EEEEECSSSCCCC--EEE
T ss_pred             ------------cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce------------EEeccCCCCCccc--eEE
Confidence                        1266778999998  78999999999999999988754            3333345555544  455


Q ss_pred             cCCCcEEEEEcCCC----------cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        235 DYWQKILAVGNQSG----------RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       235 ~~~~~~l~~~~~dg----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|||++|++++.++          .|++||+.+++       ......|...+.+++|+|||++|+
T Consensus       429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-------~~~l~~~~~~~~~~~~spdG~~l~  487 (1045)
T 1k32_A          429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-------IFAATTENSHDYAPAFDADSKNLY  487 (1045)
T ss_dssp             CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-------EEECSCSSSBEEEEEECTTSCEEE
T ss_pred             CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-------EEEeeCCCcccCCceEcCCCCEEE
Confidence            67899999887654          89999998863       223335667788999999999886

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.87  E-value=1.1e-20  Score=159.57  Aligned_cols=217  Identities=10%  Similarity=0.012  Sum_probs=149.7

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecC-CCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeec---CCeEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSK---DHTLRL   83 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~---dg~i~v   83 (291)
                      +..+|++++|+||+    +.||.++. ||+++||++++++.. .+..|. ..+..++|+| + +++++++.   +....+
T Consensus        20 ~~~~~~~~~~~~DG----~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l   92 (582)
T 3o4h_A           20 IAVEKYSLQGVVDG----DKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHAL   92 (582)
T ss_dssp             HHSCEEEEEEEETT----TEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEE
T ss_pred             hccchheeecCCCC----CeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCC-C-eEEEEeccCCCCcceEE
Confidence            35689999999999    48888876 999999999766554 444454 6899999999 7 78887765   455566


Q ss_pred             EECCC---cceeeeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         84 WNIKT---DICIAIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        84 wd~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      |.+..   +... .+   .. ...+...+|+|+++. +++++.++.+.+||+.+++......                  
T Consensus        93 ~~~~~~~~g~~~-~l---~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~------------------  149 (582)
T 3o4h_A           93 FKVNTSRPGEEQ-RL---EA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR------------------  149 (582)
T ss_dssp             EEEETTSTTCCE-EC---TT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE------------------
T ss_pred             EEEeccCCCccc-cc---cC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec------------------
Confidence            55433   3332 33   12 223446688888863 3344445556699998876432211                  


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCC----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS  233 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  233 (291)
                                 +..  .+++|+  |++|++++.+    +.|.+||+.+++.             ..+..+...+.  ..+
T Consensus       150 -----------~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-------------~~l~~~~~~~~--~~~  201 (582)
T 3o4h_A          150 -----------LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-------------RVFDSGEGSFS--SAS  201 (582)
T ss_dssp             -----------ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-------------EEECCSSCEEE--EEE
T ss_pred             -----------CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-------------eEeecCCCccc--cce
Confidence                       222  567776  8899988777    7899999887653             34445555444  456


Q ss_pred             ecCCCcEEEEEcCCC--cEEEEEcCCCCCCcceeEEEeccccccceeeeE--------EccCCceee
Q psy10348        234 MDYWQKILAVGNQSG--RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT--------LSKNGNVLL  290 (291)
Q Consensus       234 ~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~g~~l~  290 (291)
                      ++|||++|+++..+|  .|++||+.+++.     .  ....+...+.+++        |+|||.+++
T Consensus       202 ~SpDG~~l~~~~~~~~~~i~~~d~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~spdg~~~~  261 (582)
T 3o4h_A          202 ISPGMKVTAGLETAREARLVTVDPRDGSV-----E--DLELPSKDFSSYRPTAITWLGYLPDGRLAV  261 (582)
T ss_dssp             ECTTSCEEEEEECSSCEEEEEECTTTCCE-----E--ECCCSCSHHHHHCCSEEEEEEECTTSCEEE
T ss_pred             ECCCCCEEEEccCCCeeEEEEEcCCCCcE-----E--EccCCCcChhhhhhccccceeEcCCCcEEE
Confidence            678899999888888  899999998752     1  2235667788888        999996654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.86  E-value=5.2e-21  Score=165.55  Aligned_cols=239  Identities=8%  Similarity=0.017  Sum_probs=153.0

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc---ceeEEEEecCCCcEEEEeec---------CCeE
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH---AINELKFHPQDFNLLLSVSK---------DHTL   81 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~---------dg~i   81 (291)
                      .+++|+|++    .+++++ .|+.|++||+.+++....+..|..   .+.+++|+| |+++|++++.         ++.|
T Consensus        19 ~~~~~s~dg----~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i   92 (719)
T 1z68_A           19 FFPNWISGQ----EYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATY   92 (719)
T ss_dssp             CCCEESSSS----EEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEE
T ss_pred             CccEECCCC----eEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEE
Confidence            367899988    355554 699999999999988777765544   389999999 9999998876         7899


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ++||+.+++.+...    .....+..++|+|||+.|+.+. |+.|++||+.+++.......       +..         
T Consensus        93 ~~~d~~~g~~~~~~----~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~-------~~~---------  151 (719)
T 1z68_A           93 YIYDLSNGEFVRGN----ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN-------GRE---------  151 (719)
T ss_dssp             EEEETTTTEECCSS----CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC-------CBT---------
T ss_pred             EEEECCCCccccce----ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC-------CCc---------
Confidence            99999988763211    1124688899999999999886 78999999988765322110       000         


Q ss_pred             CcccccccccCcc---------eeEEEEc--CCEEEEecCCC----------------------------------eEEE
Q psy10348        162 FPQFSTRDIHRNY---------VDCVRWL--GDFVLSKSCEN----------------------------------CIIC  196 (291)
Q Consensus       162 ~~~~~~~~~~~~~---------v~~~~~~--~~~l~~~~~d~----------------------------------~i~i  196 (291)
                         .....++...         ..+++|+  |++|++++.|.                                  .|++
T Consensus       152 ---~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~  228 (719)
T 1z68_A          152 ---NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI  228 (719)
T ss_dssp             ---TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred             ---CCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Confidence               0000112222         2578888  67888776542                                  7888


Q ss_pred             ecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----CcEEEEE----cCCCCCCcceeEEE
Q psy10348        197 WKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----GRTYVWD----LDVQDPSSIKFQIL  268 (291)
Q Consensus       197 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----g~i~vwd----~~~~~~~~~~~~~~  268 (291)
                      ||+.+++......    ......+..+...+..  ++++||++++++....    ..|.+||    +.+++......  .
T Consensus       229 ~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~--~  300 (719)
T 1z68_A          229 IDTTYPAYVGPQE----VPVPAMIASSDYYFSW--LTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE--H  300 (719)
T ss_dssp             EESSCHHHHCCEE----CCCCHHHHTSCEEEEE--EEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE--E
T ss_pred             EECCCCCccceeE----ccCCccCCCCcceEEE--eEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe--c
Confidence            9887654210000    0000112334444444  4566778887775432    3488899    77665432110  0


Q ss_pred             ecccccccee-----eeEEccCCceee
Q psy10348        269 SHPRCMSAVR-----QTTLSKNGNVLL  290 (291)
Q Consensus       269 ~~~~~~~~v~-----~~~~s~~g~~l~  290 (291)
                      ...+|.+.+.     .++|+|||+.|+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~spdg~~l~  327 (719)
T 1z68_A          301 IEESRTGWAGGFFVSTPVFSYDAISYY  327 (719)
T ss_dssp             EEECSSSCSSSSSCCCCEECTTSSCEE
T ss_pred             ccccCCceEccccCCccEECCCCCeEE
Confidence            0024555666     889999999653

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.86  E-value=5.6e-19  Score=140.51  Aligned_cols=238  Identities=10%  Similarity=0.003  Sum_probs=146.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCC----CeEEEEccCC--cce--eEEEeeeccceeEEEEecCCCcEEEEee-cCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSR----AVIRIFSPAF--HAC--VRHFYGHGHAINELKFHPQDFNLLLSVS-KDH   79 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~d----g~i~vw~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg   79 (291)
                      +......++|+|++    ++|++++.+    +.|.+|+++.  ++.  +.....+......+++   ++++|++++ .++
T Consensus        48 ~~~~p~~l~~spdg----~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~  120 (361)
T 3scy_A           48 EVANPSYLIPSADG----KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT---NGKNIVTANYSGG  120 (361)
T ss_dssp             ECSCCCSEEECTTS----SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE---CSSEEEEEETTTT
T ss_pred             cCCCCceEEECCCC----CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE---CCCEEEEEECCCC
Confidence            55667788999998    488888775    7999998865  433  2333334455666776   445555554 688


Q ss_pred             eEEEEECCCcceeeeecc-----------ccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchh------hhhh-
Q psy10348         80 TLRLWNIKTDICIAIFGG-----------VEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEI------KDAC-  140 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~-----------~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~------~~~~-  140 (291)
                      .|.+|++.....+..+..           ...+...+.+++|+|+|+++++++ .++.|++|++.....      +... 
T Consensus       121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~  200 (361)
T 3scy_A          121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG  200 (361)
T ss_dssp             EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred             EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence            999999975443322110           011234468899999999776655 488999999875431      1000 


Q ss_pred             ccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeee
Q psy10348        141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTII  217 (291)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~  217 (291)
                      ..                      ......+......++|+  ++++++++ .++.|.+||+.++..          ..+
T Consensus       201 ~~----------------------~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~----------~~~  248 (361)
T 3scy_A          201 TP----------------------EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML----------DEI  248 (361)
T ss_dssp             EE----------------------EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE----------EEE
T ss_pred             cc----------------------cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce----------EEe
Confidence            00                      00000133446788998  66666665 689999999875532          112


Q ss_pred             eeec---CCcccEEEEEEEecCCCcEEEEEcC--CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        218 NRLN---FKDCEIWFIRFSMDYWQKILAVGNQ--SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       218 ~~~~---~~~~~i~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..+.   .+....  ..++++|||++|+++..  ++.|.+|++............+.  . ...+.+++|+|||++|+
T Consensus       249 ~~~~~~~~~~~~~--~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~-g~~~~~~~~spdg~~l~  321 (361)
T 3scy_A          249 QTVAADTVNAQGS--GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL--T-GIHPRNFIITPNGKYLL  321 (361)
T ss_dssp             EEEESCSSCCCCE--EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--C-SSCCCEEEECTTSCEEE
T ss_pred             EEEecCCCCCCCc--ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--C-CCCCceEEECCCCCEEE
Confidence            2222   222222  34567788999977665  48999999963211101112222  2 35788999999999876

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=3.2e-20  Score=160.28  Aligned_cols=235  Identities=11%  Similarity=0.080  Sum_probs=147.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-EEEeeec-----------------cceeEEEEecCCCcEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-RHFYGHG-----------------HAINELKFHPQDFNLL   72 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~~l   72 (291)
                      ..+..+.|.  +    ..+++++.++ | +||+.+++.+ ..+..|.                 ..|.+++|+| + ..+
T Consensus        26 ~~~~~~~w~--g----~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp-d-~~~   95 (706)
T 2z3z_A           26 EYVVGLQWM--G----DNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG-R-GLV   95 (706)
T ss_dssp             --CTTCEEE--T----TEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETT-T-TEE
T ss_pred             ccCCCCcCc--C----CeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECC-C-CeE
Confidence            345567777  3    3677777777 8 9999999874 4454443                 4699999999 6 454


Q ss_pred             EEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-----chhhhhhccccccC
Q psy10348         73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-----PEIKDACAESYTFN  147 (291)
Q Consensus        73 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-----~~~~~~~~~~~~~~  147 (291)
                      +.+ .++.|++||+.+++.....    .+...+.+++|+|+|++|+++ .|+.|++||+.+     ++.........   
T Consensus        96 ~~~-~~~~i~~~d~~~~~~~~l~----~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~---  166 (706)
T 2z3z_A           96 VLF-TQGGLVGFDMLARKVTYLF----DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT---  166 (706)
T ss_dssp             EEE-ETTEEEEEETTTTEEEEEE----CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB---
T ss_pred             EEE-ECCEEEEEECCCCceEEcc----CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC---
Confidence            444 3599999999987765543    566778899999999999985 689999999988     65432211000   


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec---------------------------------CCC
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS---------------------------------CEN  192 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~---------------------------------~d~  192 (291)
                          ......    .+   ....+...+.++.|+  |++|++++                                 .+.
T Consensus       167 ----~~~~~g----~~---~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~  235 (706)
T 2z3z_A          167 ----ETLVYG----QA---VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV  235 (706)
T ss_dssp             ----TTEEES----SC---CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred             ----CCeEcc----cc---hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence                000000    00   001123346788898  77888776                                 457


Q ss_pred             eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC-----cEEEEEcCCCCCCcceeEE
Q psy10348        193 CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG-----RTYVWDLDVQDPSSIKFQI  267 (291)
Q Consensus       193 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~  267 (291)
                      .|.+||+.+++..          .+.....+...+  ..++++|||++|++++.++     .|++||+.+++...   ..
T Consensus       236 ~l~~~d~~~~~~~----------~~~~~~~~~~~~--~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~---~~  300 (706)
T 2z3z_A          236 TVGIYHLATGKTV----------YLQTGEPKEKFL--TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR---TL  300 (706)
T ss_dssp             EEEEEETTTTEEE----------ECCCCSCTTCEE--EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE---EE
T ss_pred             EEEEEECCCCceE----------eeccCCCCceeE--eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee---EE
Confidence            8999999876431          111111233333  4456678899999988775     89999999874221   12


Q ss_pred             Ee--ccccccceeeeEEcc--CCceee
Q psy10348        268 LS--HPRCMSAVRQTTLSK--NGNVLL  290 (291)
Q Consensus       268 ~~--~~~~~~~v~~~~~s~--~g~~l~  290 (291)
                      ..  .......+.+++|+|  ||++|+
T Consensus       301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~  327 (706)
T 2z3z_A          301 FVETDKHYVEPLHPLTFLPGSNNQFIW  327 (706)
T ss_dssp             EEEECSSCCCCCSCCEECTTCSSEEEE
T ss_pred             EEccCCCeECccCCceeecCCCCEEEE
Confidence            21  111112357899999  999875

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.86  E-value=5.7e-20  Score=159.57  Aligned_cols=231  Identities=10%  Similarity=0.014  Sum_probs=158.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc----------------eeEEEEecCCCcE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA----------------INELKFHPQDFNL   71 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~~   71 (291)
                      .+...+.+++||||+    ++|+.++ ++.|++||+.+++..+....+...                +..++|+| |+++
T Consensus       149 ~~~~~~~~~~~SPDG----~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~  222 (741)
T 2ecf_A          149 HGEGFATDAKLSPKG----GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSA  222 (741)
T ss_dssp             CSSSCEEEEEECTTS----SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSC
T ss_pred             cCCcccccccCCCCC----CEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECC-CCCE
Confidence            355789999999999    4888876 469999999988765544433332                47899999 9999


Q ss_pred             EEEeecCC---------------------------------eEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEE
Q psy10348         72 LLSVSKDH---------------------------------TLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKI  117 (291)
Q Consensus        72 l~s~~~dg---------------------------------~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  117 (291)
                      |++++.|+                                 .|.+||+.+ ++...... ...|...+..++| |+|++|
T Consensus       223 l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~-pDg~~l  300 (741)
T 2ecf_A          223 IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDL-GKEQDIYLARVNW-RDPQHL  300 (741)
T ss_dssp             EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECC-CSCSSEEEEEEEE-EETTEE
T ss_pred             EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecC-CCCcceEEEEEEe-CCCCEE
Confidence            99987765                                 789999988 77554331 1247789999999 999999


Q ss_pred             EEEec-----CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC
Q psy10348        118 MSCGM-----DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC  190 (291)
Q Consensus       118 ~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~  190 (291)
                      ++++.     +..|++||+.+++....+....                        ...-..+..++|+  |+++++++.
T Consensus       301 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~------------------------~~~~~~~~~~~~spdg~~~~~~~~  356 (741)
T 2ecf_A          301 SFQRQSRDQKKLDLVEVTLASNQQRVLAHETS------------------------PTWVPLHNSLRFLDDGSILWSSER  356 (741)
T ss_dssp             EEEEEETTSSEEEEEEEETTTCCEEEEEEEEC------------------------SSCCCCCSCCEECTTSCEEEEECT
T ss_pred             EEEEecccCCeEEEEEEECCCCceEEEEEcCC------------------------CCcCCcCCceEECCCCeEEEEecC
Confidence            87764     5679999999887543332100                        0000134567887  678888888


Q ss_pred             CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE-EEcCCC--cEEEEEcCC-CCCCcceeE
Q psy10348        191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA-VGNQSG--RTYVWDLDV-QDPSSIKFQ  266 (291)
Q Consensus       191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-~~~~dg--~i~vwd~~~-~~~~~~~~~  266 (291)
                      |+.+++|.+....           . ...+..+...+..+ ..++|+++.|+ +++.++  .++||++.. +...    .
T Consensus       357 ~g~~~l~~~~~~~-----------~-~~~l~~~~~~v~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~----~  419 (741)
T 2ecf_A          357 TGFQHLYRIDSKG-----------K-AAALTHGNWSVDEL-LAVDEKAGLAYFRAGIESARESQIYAVPLQGGQP----Q  419 (741)
T ss_dssp             TSSCEEEEECSSS-----------C-EEESCCSSSCEEEE-EEEETTTTEEEEEECSSCTTCBEEEEEETTCCCC----E
T ss_pred             CCccEEEEEcCCC-----------C-eeeeeecceEEEeE-eEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCe----e
Confidence            9988887664221           1 33444455445433 13557798775 455555  899999875 3211    2


Q ss_pred             EEeccccccceeeeEEccCCceee
Q psy10348        267 ILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       267 ~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+..   ...+.+++|||||++|+
T Consensus       420 ~l~~---~~~~~~~~~spdg~~l~  440 (741)
T 2ecf_A          420 RLSK---APGMHSASFARNASVYV  440 (741)
T ss_dssp             ECCC---SCSEEEEEECTTSSEEE
T ss_pred             eccc---CCCceEEEECCCCCEEE
Confidence            2322   35678999999999886

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.85  E-value=3.4e-20  Score=166.39  Aligned_cols=221  Identities=13%  Similarity=0.059  Sum_probs=163.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      .|...+.++.|+++.     ++++++.++.++||.+.. +.....+..|. .+...+|+| +++.|+.+ .++.|.+||+
T Consensus       201 ~~~~~v~~~~~s~d~-----l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~Sp-DG~~la~~-~~~~i~~~d~  272 (1045)
T 1k32_A          201 DMSTHVSSPVIVGHR-----IYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNT-DGRRILFS-KGGSIYIFNP  272 (1045)
T ss_dssp             CCSSCCEEEEEETTE-----EEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEE-SSSCEEEE-ETTEEEEECT
T ss_pred             CCCCcccceEEeCCE-----EEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcC-CCCEEEEE-eCCEEEEecC
Confidence            467889999999874     888888899999998653 44455565554 467789999 88888887 4899999999


Q ss_pred             CCcceeeeeccccC-----------CCCceEEEEEc-cCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348         87 KTDICIAIFGGVEG-----------HRDEVLSADFD-LLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        87 ~~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~  154 (291)
                      ... .+..+   ..           |...+.+++|+ |+|++|++++ ++.+.+|++..++....               
T Consensus       273 ~~~-~l~~l---~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~---------------  332 (1045)
T 1k32_A          273 DTE-KIEKI---EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV---------------  332 (1045)
T ss_dssp             TTC-CEEEC---CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---------------
T ss_pred             Cce-Eeeee---ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---------------
Confidence            543 33344   23           34578999999 9999999888 88999999887653221               


Q ss_pred             ccCccccCcccccccccCc-ceeEEEEc-CCEEEEecCCCeEE-EecCCCCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348        155 FDTQKEHFPQFSTRDIHRN-YVDCVRWL-GDFVLSKSCENCII-CWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~l~~~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                                    ..|.. .+..++|+ ++.++.++.++.+. +||+.....             ..+..+...+..  
T Consensus       333 --------------~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~-------------~~l~~~~~~~~~--  383 (1045)
T 1k32_A          333 --------------PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-------------EKFEENLGNVFA--  383 (1045)
T ss_dssp             --------------SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-------------EECCCCCCSEEE--
T ss_pred             --------------cCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCc-------------eEecCCccceee--
Confidence                          12445 67788887 55788777788888 999876532             223344444544  


Q ss_pred             EEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        232 FSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       232 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++|||++|++++.++.|++||+.+++.    .....  +|.+.+.+++|||||++|++
T Consensus       384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~----~~~~~--~~~~~v~~~~~SpDG~~la~  437 (1045)
T 1k32_A          384 MGVDRNGKFAVVANDRFEIMTVDLETGKP----TVIER--SREAMITDFTISDNSRFIAY  437 (1045)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE--CSSSCCCCEEECTTSCEEEE
T ss_pred             eEECCCCCEEEEECCCCeEEEEECCCCce----EEecc--CCCCCccceEECCCCCeEEE
Confidence            55667899999999999999999998752    22322  56778999999999999863

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.84  E-value=1.3e-19  Score=156.95  Aligned_cols=233  Identities=10%  Similarity=-0.007  Sum_probs=150.8

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccce------------------eEEEEecCCCcEEE
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI------------------NELKFHPQDFNLLL   73 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~l~   73 (291)
                      .+.+++||||+    +.||.++. +.|++||+.+++..+....+...+                  .+++|+| +++.|+
T Consensus       115 ~~~~~~~SPdG----~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la  188 (723)
T 1xfd_A          115 KLQYAGWGPKG----QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLA  188 (723)
T ss_dssp             CCSBCCBCSST----TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEE
T ss_pred             cccccEECCCC----CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEE
Confidence            47889999998    48888775 799999999888776665544433                  7899999 999999


Q ss_pred             EeecCC----------------------------------eEEEEECCCcceeeeecc---ccCCCCceEEEEEccCCCE
Q psy10348         74 SVSKDH----------------------------------TLRLWNIKTDICIAIFGG---VEGHRDEVLSADFDLLGTK  116 (291)
Q Consensus        74 s~~~dg----------------------------------~i~vwd~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~  116 (291)
                      +++.|+                                  .|++||+.+++....+..   ...+...+..++|+|||++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~  268 (723)
T 1xfd_A          189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV  268 (723)
T ss_dssp             EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE
T ss_pred             EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE
Confidence            887553                                  799999998876555520   0113678999999999998


Q ss_pred             EEEEec----CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcce----eEEEEc--CCEEE
Q psy10348        117 IMSCGM----DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV----DCVRWL--GDFVL  186 (291)
Q Consensus       117 l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~--~~~l~  186 (291)
                      +++...    +..|++||+.+++....+..                           .+...+    ..++|+  |+.|+
T Consensus       269 l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---------------------------~~~~~~~~~~~~~~~spdg~~l~  321 (723)
T 1xfd_A          269 AVTWLNRAQNVSILTLCDATTGVCTKKHED---------------------------ESEAWLHRQNEEPVFSKDGRKFF  321 (723)
T ss_dssp             EEEEEETTSCEEEEEEEETTTCCEEEEEEE---------------------------ECSSCCCCCCCCCEECTTSCSEE
T ss_pred             EEEEEcCCCCeEEEEEEeCCCCcceEEEEe---------------------------ccCCEEeccCCCceEcCCCCeEE
Confidence            877653    35799999988875433211                           022222    256787  66555


Q ss_pred             E--ecCCC------eEEEec-CCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC---CcEEEEE
Q psy10348        187 S--KSCEN------CIICWK-PGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS---GRTYVWD  254 (291)
Q Consensus       187 ~--~~~d~------~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd  254 (291)
                      .  +..++      .|.+|| ......          .....+......+.. ..+++|||++|+..+.+   +.+++|+
T Consensus       322 ~~~~~~~~~~~~~~~l~~~d~~~~~~~----------~~~~~l~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~l~~  390 (723)
T 1xfd_A          322 FIRAIPQGGRGKFYHITVSSSQPNSSN----------DNIQSITSGDWDVTK-ILAYDEKGNKIYFLSTEDLPRRRQLYS  390 (723)
T ss_dssp             EEEEECCSSSSCEEEEEEECSSCCSSS----------CCCCBSCCSSSCEEE-EEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred             EEEecccCCCcceeEEEEEeccCCCCc----------cceeEeecCCeEEEe-eeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence            3  45566      577777 333320          001122222222221 13566779999766544   7899999


Q ss_pred             cCCCCCCcceeEEEec-cccccceeeeEEccCCceee
Q psy10348        255 LDVQDPSSIKFQILSH-PRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       255 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.......  ...+.. ..+...+..++|+|||++|+
T Consensus       391 ~~~~~~~~--~~~l~~~~~~~~~~~~~~~spdg~~l~  425 (723)
T 1xfd_A          391 ANTVGNFN--RQCLSCDLVENCTYFSASFSHSMDFFL  425 (723)
T ss_dssp             ECSSTTCC--CBCSSTTSSSSCCCCEEEECTTSSEEE
T ss_pred             EeCCCCCC--cceecccccCCCCeEEEEECCCCCEEE
Confidence            87543110  011211 11456788999999999886

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.84  E-value=1.2e-18  Score=138.68  Aligned_cols=241  Identities=11%  Similarity=0.003  Sum_probs=151.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC-CcceeEEEeee-ccceeEEEEecCCCcE--EEEee----------
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-FHACVRHFYGH-GHAINELKFHPQDFNL--LLSVS----------   76 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~--l~s~~----------   76 (291)
                      ..+..++|+|++    ++|++++.+ .|.+|++. +++........ .+.+..++|+| ++++  +++++          
T Consensus        40 ~~~~~~a~spdg----~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~  113 (365)
T 1jof_A           40 EPISWMTFDHER----KNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANP  113 (365)
T ss_dssp             CCCSEEEECTTS----SEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEE
T ss_pred             CCCcEEEECCCC----CEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccce
Confidence            367789999998    488888887 99999997 77765433311 13466789999 8884  55553          


Q ss_pred             ---cCCeEEEEECC-Ccceeeeecccc-CCCCceEEEEEccCCCEEEEEec-CCcEEEEecc-CchhhhhhccccccCCC
Q psy10348         77 ---KDHTLRLWNIK-TDICIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLT-KPEIKDACAESYTFNPA  149 (291)
Q Consensus        77 ---~dg~i~vwd~~-~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~-~~~~~~~~~~~~~~~~~  149 (291)
                         .+|.+.+|++. .++....+.... .+...+.+++|+|+|++++++.. ++.|++||+. +++......  .     
T Consensus       114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~--~-----  186 (365)
T 1jof_A          114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS--V-----  186 (365)
T ss_dssp             ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE--E-----
T ss_pred             eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeee--E-----
Confidence               68999999997 455544332111 25567999999999998887764 6899999998 554321000  0     


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCC--CCccccccCCCceeeeeeecC--
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGR--LEDKELRTNETNVTIINRLNF--  222 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~--  222 (291)
                                       ....|...+..++|+  |+++++++. ++.|.+|++..  ++....      ...+..+..  
T Consensus       187 -----------------~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~------~~~~~~~~~~~  243 (365)
T 1jof_A          187 -----------------DAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT------HHSFPLIPPGI  243 (365)
T ss_dssp             -----------------ECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE------EEEEESSCTTC
T ss_pred             -----------------ecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc------cceEEcCCCCc
Confidence                             000134557889998  667776654 78999997653  321000      000111211  


Q ss_pred             --Ccc----cEEEEEEE-ecCCCcEEEEEcCC-C-----cEEEEEcC-CCCCCcceeEEEe-ccccccceeeeEEcc---
Q psy10348        223 --KDC----EIWFIRFS-MDYWQKILAVGNQS-G-----RTYVWDLD-VQDPSSIKFQILS-HPRCMSAVRQTTLSK---  284 (291)
Q Consensus       223 --~~~----~i~~~~~~-~~~~~~~l~~~~~d-g-----~i~vwd~~-~~~~~~~~~~~~~-~~~~~~~v~~~~~s~---  284 (291)
                        +..    ......++ ++|||++|++++.+ +     .|.+|++. +++    ...... ...+...+..++|+|   
T Consensus       244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~----~~~~~~~~~~~~~~~~~~a~sp~~~  319 (365)
T 1jof_A          244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS----IEKQLFLSPTPTSGGHSNAVSPCPW  319 (365)
T ss_dssp             CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC----EEEEEEEEECSSCCTTCCCEEECTT
T ss_pred             CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC----EEEeeeeeecCCCCcccceecCCCc
Confidence              111    00234456 67889998877643 2     89999996 442    212111 112334577899999   


Q ss_pred             CCceeeC
Q psy10348        285 NGNVLLC  291 (291)
Q Consensus       285 ~g~~l~s  291 (291)
                      ||++|++
T Consensus       320 dg~~l~v  326 (365)
T 1jof_A          320 SDEWMAI  326 (365)
T ss_dssp             CTTEEEE
T ss_pred             CCCEEEE
Confidence            8998863

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.83  E-value=2.3e-18  Score=136.04  Aligned_cols=222  Identities=9%  Similarity=-0.031  Sum_probs=142.4

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEeecC-------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVSKD-------   78 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~d-------   78 (291)
                      .+..++|+|++.   .+++++..++.|.+||+.+++.+..+..+      ...+..++|+| ++++|++++.+       
T Consensus        44 ~~~~~~~s~dg~---~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~  119 (349)
T 1jmx_B           44 GPGTAMMAPDNR---TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDH  119 (349)
T ss_dssp             SSCEEEECTTSS---EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSC
T ss_pred             CCceeEECCCCC---EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccc
Confidence            578899999984   24456667899999999999888777632      23478999999 88999888865       


Q ss_pred             -----CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCC----
Q psy10348         79 -----HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA----  149 (291)
Q Consensus        79 -----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~----  149 (291)
                           +.|.+||+.+++....+.. ..+...+.+++|+|+|+ +++++  +.|.+||+.+++....+.......+.    
T Consensus       120 ~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~  195 (349)
T 1jmx_B          120 YVVKPPRLEVFSTADGLEAKPVRT-FPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAP  195 (349)
T ss_dssp             EEECCCEEEEEEGGGGGGBCCSEE-EECCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred             cccCCCeEEEEECCCccccceeee-ccCCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCc
Confidence                 8999999988554332211 12334688999999999 66654  44999999988766544321100000    


Q ss_pred             CccccccC-------------------------------------ccccCcccccccccCcceeEEEEc---CCEEEEec
Q psy10348        150 RSTRPFDT-------------------------------------QKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKS  189 (291)
Q Consensus       150 ~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~  189 (291)
                      .....+..                                     ...... ......+...+..++++   +++++++ 
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sp~dg~~l~~~-  273 (349)
T 1jmx_B          196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH-TQEFADLTELYFTGLRSPKDPNQIYGV-  273 (349)
T ss_dssp             BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECSSCTTEEEEE-
T ss_pred             cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE-ecccccCCCcceeeEecCCCCCEEEEE-
Confidence            00000000                                     000000 00001122345566665   4577776 


Q ss_pred             CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                       ++.|.+||+.+.+.            +..+..... +.  .++++|++++|++++.++.|++||+.+++
T Consensus       274 -~~~v~~~d~~~~~~------------~~~~~~~~~-~~--~~~~s~dg~~l~~~~~~~~v~v~d~~~~~  327 (349)
T 1jmx_B          274 -LNRLAKYDLKQRKL------------IKAANLDHT-YY--CVAFDKKGDKLYLGGTFNDLAVFNPDTLE  327 (349)
T ss_dssp             -ESEEEEEETTTTEE------------EEEEECSSC-CC--EEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred             -cCeEEEEECccCeE------------EEEEcCCCC-cc--ceEECCCCCEEEEecCCCeEEEEeccccc
Confidence             89999999988643            344433222 23  35566779999888889999999999874

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.83  E-value=5e-19  Score=153.47  Aligned_cols=114  Identities=13%  Similarity=0.179  Sum_probs=92.9

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc-----eeEEEEecCCCcEEEEeecC--------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA-----INELKFHPQDFNLLLSVSKD--------   78 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~s~~~d--------   78 (291)
                      ...+++|+|++    .+++++  ||.|++||+.+++....+.+|...     ...+.|+| |+++|+.++.+        
T Consensus        18 ~~~~~~w~~dg----~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~   90 (740)
T 4a5s_A           18 KLYSLRWISDH----EYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSY   90 (740)
T ss_dssp             CCCCEEECSSS----EEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCE
T ss_pred             cccccEECCCC----cEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEcc
Confidence            45689999998    488876  899999999999987777776533     23478999 99999998876        


Q ss_pred             -CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348         79 -HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK  137 (291)
Q Consensus        79 -g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~  137 (291)
                       +.+.+||+.+++... +   ..+...+...+|||||+.|+.+. |+.|++||+.+++..
T Consensus        91 ~~~~~~~d~~~~~~~~-l---~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~  145 (740)
T 4a5s_A           91 TASYDIYDLNKRQLIT-E---ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY  145 (740)
T ss_dssp             EEEEEEEETTTTEECC-S---SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred             ceEEEEEECCCCcEEE-c---ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence             566799999887554 3   56778899999999999999885 789999999887643

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.82  E-value=1.4e-17  Score=131.69  Aligned_cols=212  Identities=14%  Similarity=0.054  Sum_probs=135.0

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCC-cc--eeEEEeee---------ccceeEEEEecCCCcEEEEe
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAF-HA--CVRHFYGH---------GHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~l~s~   75 (291)
                      +...+..++|+|++.    +|++++ .++.|.+|++.. +.  .+..+...         ...+.+++|+| +++++++.
T Consensus        84 ~~~~p~~~a~spdg~----~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~  158 (347)
T 3hfq_A           84 PGTPPAYVAVDEARQ----LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVID  158 (347)
T ss_dssp             ESCCCSEEEEETTTT----EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEE
T ss_pred             CCCCCEEEEECCCCC----EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEe
Confidence            466788999999984    777776 789999999963 32  23333211         12478899999 77877777


Q ss_pred             ecCCeEEEEECC-CcceeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEeccC--chhhhhhccccccCCCCc
Q psy10348         76 SKDHTLRLWNIK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLTK--PEIKDACAESYTFNPARS  151 (291)
Q Consensus        76 ~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~~--~~~~~~~~~~~~~~~~~~  151 (291)
                      ..++.|.+|++. +++..............+..++|+|+|+++++ ...++.+.+|++..  ++...  .......+.. 
T Consensus       159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~--~~~~~~~~~~-  235 (347)
T 3hfq_A          159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ--LGIVKTIPAD-  235 (347)
T ss_dssp             TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE--EEEEESSCTT-
T ss_pred             CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE--eeeeeecCCC-
Confidence            778899999998 45432211000123346788999999996666 45688999999875  32110  0000000000 


Q ss_pred             cccccCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                       ......+..++|+  |++| ++...++.|.+|++......         ..+..+..+...+.
T Consensus       236 -----------------~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~---------~~~~~~~~~~~~~~  289 (347)
T 3hfq_A          236 -----------------YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL---------TLIQQISTEGDFPR  289 (347)
T ss_dssp             -----------------CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE---------EEEEEEECSSSCCC
T ss_pred             -----------------CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE---------EEeEEEecCCCCcC
Confidence                             0012457889998  6666 55666899999998632111         33444444333333


Q ss_pred             EEEEEecCCCcEEEEEcC-CCcEEEEEcC
Q psy10348        229 FIRFSMDYWQKILAVGNQ-SGRTYVWDLD  256 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~-dg~i~vwd~~  256 (291)
                      .  ++++|+|++|++++. ++.|.+|++.
T Consensus       290 ~--~~~spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          290 D--FDLDPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             E--EEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             e--EEECCCCCEEEEEEcCCCcEEEEEEe
Confidence            3  556788999888875 5899999554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.81  E-value=1.2e-16  Score=122.87  Aligned_cols=226  Identities=12%  Similarity=0.121  Sum_probs=154.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee------eccceeEEEEecCCCcEEEEeec-CCeEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG------HGHAINELKFHPQDFNLLLSVSK-DHTLRL   83 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~s~~~-dg~i~v   83 (291)
                      ....++++++++    .++++...++.|.+||.+ ++.+..+..      +...+..+++.+.++.++++... ++.|.+
T Consensus        30 ~~p~~v~~~~~g----~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~  104 (286)
T 1q7f_A           30 TEPSGVAVNAQN----DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI  104 (286)
T ss_dssp             SCEEEEEECTTC----CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred             CCCceEEECCCC----CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence            567889999887    488888889999999987 666666642      33568899995327777776643 889999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      || .+++.+..+.  ..+...+.+++++++|+++++...++.|.+||.. ++....+..                     
T Consensus       105 ~d-~~g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~---------------------  159 (286)
T 1q7f_A          105 YN-QYGQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC---------------------  159 (286)
T ss_dssp             EC-TTSCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC---------------------
T ss_pred             EC-CCCcEEEEec--CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCC---------------------
Confidence            99 5577766652  2345678999999999988877778999999964 332222110                     


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc--ccEEEEEEEecCCCc
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD--CEIWFIRFSMDYWQK  239 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~  239 (291)
                           ..+...+..++++  ++++++...++.|++||.... .            +..+....  ....  .++++++|+
T Consensus       160 -----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~------------~~~~~~~g~~~~p~--~i~~d~~G~  219 (286)
T 1q7f_A          160 -----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-Y------------LRQIGGEGITNYPI--GVGINSNGE  219 (286)
T ss_dssp             -----TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-E------------EEEESCTTTSCSEE--EEEECTTCC
T ss_pred             -----CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC-E------------EEEEccCCccCCCc--EEEECCCCC
Confidence                 0133457888988  566777777999999997432 1            33333221  2333  455667799


Q ss_pred             EEEEEcCCC-cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        240 ILAVGNQSG-RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       240 ~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++...++ .|.+|+... +    ....+........+.+++++|+|+++++
T Consensus       220 l~v~~~~~~~~i~~~~~~g-~----~~~~~~~~~~~~~~~~i~~~~~g~l~vs  267 (286)
T 1q7f_A          220 ILIADNHNNFNLTIFTQDG-Q----LISALESKVKHAQCFDVALMDDGSVVLA  267 (286)
T ss_dssp             EEEEECSSSCEEEEECTTS-C----EEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred             EEEEeCCCCEEEEEECCCC-C----EEEEEcccCCCCcceeEEECCCCcEEEE
Confidence            888888776 999999643 2    2233332222335789999999987764

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.80  E-value=9.6e-18  Score=134.60  Aligned_cols=224  Identities=12%  Similarity=0.058  Sum_probs=144.0

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEE--ecCCCcEEEEe--------------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKF--HPQDFNLLLSV--------------   75 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~--------------   75 (291)
                      .+...+|+|++    +.|+.++.++.|++||+.+++....+..+...+....|  +| ++.+++..              
T Consensus        82 ~~~~~~~spdg----~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~  156 (388)
T 3pe7_A           82 NTFGGFLSPDD----DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWK  156 (388)
T ss_dssp             CSSSCEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHH
T ss_pred             CccceEEcCCC----CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccc
Confidence            34467899998    59999998999999999999877766666665544444  78 77887742              


Q ss_pred             --------ecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecC------CcEEEEeccCchhhhhh
Q psy10348         76 --------SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMD------HSLKLWDLTKPEIKDAC  140 (291)
Q Consensus        76 --------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~  140 (291)
                              ..+..|.+||+.+++.....    .+...+..+.|+| +|+.|+.+..+      ..|.++|+..+......
T Consensus       157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~  232 (388)
T 3pe7_A          157 KFHEFYFTKPCCRLMRVDLKTGESTVIL----QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK  232 (388)
T ss_dssp             HHHHHGGGCCCEEEEEEETTTCCEEEEE----EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred             hhhhhhccCCcceEEEEECCCCceEEee----cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence                    24478999999988755443    5667789999999 99988877653      36777777654422111


Q ss_pred             ccccccCCCCccccccCccccCcccccccccC--cceeEEEEc--CCEEEEecC-C----CeEEEecCCCCCccccccCC
Q psy10348        141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHR--NYVDCVRWL--GDFVLSKSC-E----NCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~l~~~~~-d----~~i~iwd~~~~~~~~~~~~~  211 (291)
                                                   .+.  ..+....|+  |+.|+..+. +    ..|.+||+.+++.       
T Consensus       233 -----------------------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------  276 (388)
T 3pe7_A          233 -----------------------------THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------  276 (388)
T ss_dssp             -----------------------------CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------
T ss_pred             -----------------------------eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------
Confidence                                         022  346778887  665544332 2    2499999988764       


Q ss_pred             CceeeeeeecCCcccEEEE-EEEecCCCcEEEEE---------cCCCcEEEEEcCCCCCCcceeEEEecccccc------
Q psy10348        212 TNVTIINRLNFKDCEIWFI-RFSMDYWQKILAVG---------NQSGRTYVWDLDVQDPSSIKFQILSHPRCMS------  275 (291)
Q Consensus       212 ~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~l~~~---------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~------  275 (291)
                         +.+..+.......... ...++|||+.|+..         ..+..|++||+.+++.     ..+.  .+..      
T Consensus       277 ---~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~--~~~~~~~~~~  346 (388)
T 3pe7_A          277 ---RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-----HRVA--RHDTSWKVFE  346 (388)
T ss_dssp             ---EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-----EEEE--ECCCCCCCBT
T ss_pred             ---EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-----EEec--cccCcccccc
Confidence               2233332210000000 01244568888754         4567899999998642     2222  2222      


Q ss_pred             -----ceeeeEEccCCceee
Q psy10348        276 -----AVRQTTLSKNGNVLL  290 (291)
Q Consensus       276 -----~v~~~~~s~~g~~l~  290 (291)
                           .+.+++|+|||+.|+
T Consensus       347 ~~~~~~~~~~~~spDg~~l~  366 (388)
T 3pe7_A          347 GDRQVTHPHPSFTPDDKQIL  366 (388)
T ss_dssp             TBSSTTCCCCEECTTSSEEE
T ss_pred             cccccCCCCccCCCCCCEEE
Confidence                 478899999999886

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.79  E-value=2.6e-18  Score=145.20  Aligned_cols=212  Identities=9%  Similarity=0.042  Sum_probs=144.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCC---cceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAF---HACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRL   83 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~v   83 (291)
                      ..+.+++|+|+ .    ++++++.   +...++|.+..   +... .+... ..+...+|+| +++ .+++.+.++.+.+
T Consensus        65 ~~~~~~~~spd-~----~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~-dg~~~~~~s~~~~~~~l  136 (582)
T 3o4h_A           65 NSVLDPHYGVG-R----VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVD-TGEAVVFTGATEDRVAL  136 (582)
T ss_dssp             SEECEECTTCS-E----EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEE-CSSCEEEEEECSSCEEE
T ss_pred             cccccccCCCC-e----EEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCC-CCCeEEEEecCCCCceE
Confidence            57889999988 3    7877764   45556655432   2222 33222 2344668888 554 3344444455669


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      ||+.+++.....    .+..  .+++|+|||++|++++.|    +.|++||+.+++... +                   
T Consensus       137 ~d~~~g~~~~l~----~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~-l-------------------  190 (582)
T 3o4h_A          137 YALDGGGLRELA----RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV-F-------------------  190 (582)
T ss_dssp             EEEETTEEEEEE----EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE-E-------------------
T ss_pred             EEccCCcEEEee----cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE-e-------------------
Confidence            999988765554    2222  789999999999988877    789999998876431 1                   


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEE------
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF------  229 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------  229 (291)
                               ..|...+..++|+  |+.|+++..++  .|++||+.+++..             .+..+...+..      
T Consensus       191 ---------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-------------~~~~~~~~~~~~~~~~~  248 (582)
T 3o4h_A          191 ---------DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-------------DLELPSKDFSSYRPTAI  248 (582)
T ss_dssp             ---------CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-------------ECCCSCSHHHHHCCSEE
T ss_pred             ---------ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-------------EccCCCcChhhhhhccc
Confidence                     2367778999998  77888888888  9999999877542             22333222221      


Q ss_pred             EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ...+++|||.++++++.||.+++|++  ++.       ..  ...+.+.+++|+ +|++++
T Consensus       249 ~~~~~spdg~~~~~~~~~g~~~l~~~--g~~-------~~--~~~~~v~~~~~s-dg~~l~  297 (582)
T 3o4h_A          249 TWLGYLPDGRLAVVARREGRSAVFID--GER-------VE--APQGNHGRVVLW-RGKLVT  297 (582)
T ss_dssp             EEEEECTTSCEEEEEEETTEEEEEET--TEE-------EC--CCSSEEEEEEEE-TTEEEE
T ss_pred             cceeEcCCCcEEEEEEcCCcEEEEEE--CCe-------ec--cCCCceEEEEec-CCEEEE
Confidence            12336788999999999999999999  421       11  123578899999 998875

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.79  E-value=1e-16  Score=125.78  Aligned_cols=240  Identities=12%  Similarity=0.104  Sum_probs=158.5

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCC------------------------CeEEEEccCCcceeEEEe-eeccceeEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSR------------------------AVIRIFSPAFHACVRHFY-GHGHAINELKF   64 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~d------------------------g~i~vw~~~~~~~~~~~~-~~~~~v~~~~~   64 (291)
                      -..+.+++++|++    +++++...+                        +.|.+||..+++.+..+. ++-.....+++
T Consensus        23 l~~v~~va~d~~G----~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~   98 (329)
T 3fvz_A           23 PGQVSGVALDSKN----NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI   98 (329)
T ss_dssp             CSCEEEEEECTTC----CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred             cCCceEEEECCCC----CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence            3678999999998    488877766                        479999999898876654 33356889999


Q ss_pred             ecCCCcEEEEeecCCeEEEEECCCcc-eeeeeccc------cCCCCceEEEEEcc-CCCEEEEEe-cCCcEEEEeccCch
Q psy10348         65 HPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGV------EGHRDEVLSADFDL-LGTKIMSCG-MDHSLKLWDLTKPE  135 (291)
Q Consensus        65 ~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~------~~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~v~d~~~~~  135 (291)
                      +| +++++++...++.|++||..... .+..+...      ..+......++++| ++.++++.+ .++.|++|| .+++
T Consensus        99 d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~  176 (329)
T 3fvz_A           99 DT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK  176 (329)
T ss_dssp             CT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred             CC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence            99 88888888889999999986432 44444210      13344689999999 787777776 689999999 4455


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCC
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNET  212 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  212 (291)
                      .+..+...-    ...              ....++......++++   +.++++...++.|++||..+++.        
T Consensus       177 ~~~~~~~~g----~~~--------------~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--------  230 (329)
T 3fvz_A          177 FVTQWGEES----SGS--------------SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--------  230 (329)
T ss_dssp             EEEEECEEC----CSS--------------SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--------
T ss_pred             EEEEeccCC----CCC--------------CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--------
Confidence            443332100    000              0001133446788886   45677777889999999986643        


Q ss_pred             ceeeeeeec--CCcccEEEEEEEecC------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEc
Q psy10348        213 NVTIINRLN--FKDCEIWFIRFSMDY------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLS  283 (291)
Q Consensus       213 ~~~~~~~~~--~~~~~i~~~~~~~~~------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s  283 (291)
                          +..+.  .+...+..+.+  +|      +++..++...+..|++|++.+++.    ...+. ...+...+.+++++
T Consensus       231 ----~~~~~~~~~~~~~~~~~~--~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~----~~~~~~~~~~~~~p~~ia~~  300 (329)
T 3fvz_A          231 ----VREIKHASFGRNVFAISY--IPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI----IDVFKPVRKHFDMPHDIVAS  300 (329)
T ss_dssp             ----EEEECCTTTTTCEEEEEE--ETTEEEEEECCCCTTCSCCCCEEEEETTTCCE----EEEECCSSSCCSSEEEEEEC
T ss_pred             ----EEEEeccccCCCcceeee--cCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE----EEEEcCCCCccCCeeEEEEC
Confidence                34442  23334444444  34      233333334556899999998853    23332 13455678999999


Q ss_pred             cCCceeeC
Q psy10348        284 KNGNVLLC  291 (291)
Q Consensus       284 ~~g~~l~s  291 (291)
                      |+|.++++
T Consensus       301 ~dG~lyva  308 (329)
T 3fvz_A          301 EDGTVYIG  308 (329)
T ss_dssp             TTSEEEEE
T ss_pred             CCCCEEEE
Confidence            99976653

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.79  E-value=1.8e-17  Score=132.95  Aligned_cols=221  Identities=13%  Similarity=0.008  Sum_probs=144.7

Q ss_pred             EEeeeccCCCCCEEEEecC-CC--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348         16 CAWSMDLESGRPLLAVAGS-RA--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI   92 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~-dg--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~   92 (291)
                      .+||||+    +.|+.++. +|  .|.+||+.+++..+...++...+..+.|+| +++.|+.++.++.|++||+.+++..
T Consensus        41 ~~~SpDg----~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~  115 (388)
T 3pe7_A           41 KCFTRDG----SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEEN  115 (388)
T ss_dssp             CCBCTTS----CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEE
T ss_pred             ccCCCCC----CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcce
Confidence            6788888    47887776 66  488899998887766666666666789999 9999999999999999999998876


Q ss_pred             eeeccccCCCCceEEEE--EccCCCEEEEE----------------------ecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         93 AIFGGVEGHRDEVLSAD--FDLLGTKIMSC----------------------GMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        93 ~~~~~~~~~~~~i~~~~--~~~~~~~l~~~----------------------~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      ..+   ..+...+....  ++|++.+++..                      ..+..|.+||+.+++.....        
T Consensus       116 ~~~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~--------  184 (388)
T 3pe7_A          116 VVY---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL--------  184 (388)
T ss_dssp             EEE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE--------
T ss_pred             eee---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee--------
Confidence            665   34555554444  48999888743                      23467888998877633221        


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEcC---CEEEEecC------CCeEEEecCCCCCccccccCCCceeeeee
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG---DFVLSKSC------ENCIICWKPGRLEDKELRTNETNVTIINR  219 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  219 (291)
                                           .+...+..+.|++   +.|+....      ...|.++|......             ..
T Consensus       185 ---------------------~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-------------~~  230 (388)
T 3pe7_A          185 ---------------------QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-------------RK  230 (388)
T ss_dssp             ---------------------EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-------------EE
T ss_pred             ---------------------cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-------------EE
Confidence                                 1445577888875   45655544      33788888765432             22


Q ss_pred             ecCCcccEEEEEEEecCCCcEEEEEcC-CC----cEEEEEcCCCCCCcceeEEEeccccc---cceeeeEEccCCceee
Q psy10348        220 LNFKDCEIWFIRFSMDYWQKILAVGNQ-SG----RTYVWDLDVQDPSSIKFQILSHPRCM---SAVRQTTLSKNGNVLL  290 (291)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg----~i~vwd~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~  290 (291)
                      +..+..........++|||+.|+..+. ++    .|++||+.+++.    .......++.   .....++|+|||+.|+
T Consensus       231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~~~~~~~spdg~~l~  305 (388)
T 3pe7_A          231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN----RQLTSMPACSHLMSNYDGSLMVGDGSDAP  305 (388)
T ss_dssp             SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE----EEEEEECCEEEEEECTTSSEEEEEECCC-
T ss_pred             eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce----EEEEcCCCceeeeecCCCCeEccCCCcce
Confidence            222222223345567788997765443 22    399999998853    1121221211   1133458999999876

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.78  E-value=2.6e-16  Score=125.14  Aligned_cols=222  Identities=9%  Similarity=0.049  Sum_probs=136.4

Q ss_pred             eeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCCcceeEE---Eeee-----------ccceeEEEEecCCCcEEEEee
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAFHACVRH---FYGH-----------GHAINELKFHPQDFNLLLSVS   76 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~---~~~~-----------~~~v~~~~~~~~~~~~l~s~~   76 (291)
                      ....+++  ++    ++|++++ .++.|.+|++.....+..   ...+           ...+.+++|+| +++++++++
T Consensus       101 ~p~~~~~--dg----~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~  173 (361)
T 3scy_A          101 DPCYLTT--NG----KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADD  173 (361)
T ss_dssp             CEEEEEE--CS----SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEE
T ss_pred             CcEEEEE--CC----CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEe
Confidence            4445555  44    4555554 688999999975432221   1111           12347899999 888665554


Q ss_pred             -cCCeEEEEECCCcce------e------eeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhcc
Q psy10348         77 -KDHTLRLWNIKTDIC------I------AIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAE  142 (291)
Q Consensus        77 -~dg~i~vwd~~~~~~------~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~  142 (291)
                       .++.|.+|++.....      +      ....  ..+...+..++|+|+|+++++++ .++.|.+||+.+++...... 
T Consensus       174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~-  250 (361)
T 3scy_A          174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFK--VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT-  250 (361)
T ss_dssp             TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE--CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE-
T ss_pred             CCCCEEEEEEEcCCCCcccccceeeccccccee--cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE-
Confidence             578999998875431      1      1111  24456678999999999887777 58999999998664321100 


Q ss_pred             ccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC--CCeEEEecCCC--CCccccccCCCceee
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC--ENCIICWKPGR--LEDKELRTNETNVTI  216 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--d~~i~iwd~~~--~~~~~~~~~~~~~~~  216 (291)
                                            +.....+......++|+  |++|+++..  ++.|.+|++..  +..          ..
T Consensus       251 ----------------------~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~----------~~  298 (361)
T 3scy_A          251 ----------------------VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL----------TK  298 (361)
T ss_dssp             ----------------------EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE----------EE
T ss_pred             ----------------------EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE----------EE
Confidence                                  00011133445788998  777766555  48999999862  221          22


Q ss_pred             eeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcC--CCCCCcceeEEEeccccccceeeeEEc
Q psy10348        217 INRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLD--VQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      +..+.. ...+.  .++++|+|++|++++ .++.|.+|++.  +++.     ..+....+...+.|++|.
T Consensus       299 ~~~~~~-g~~~~--~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~-----~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          299 VGYQLT-GIHPR--NFIITPNGKYLLVACRDTNVIQIFERDQATGLL-----TDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             EEEEEC-SSCCC--EEEECTTSCEEEEEETTTTEEEEEEECTTTCCE-----EECSCCEECSSEEEEEEE
T ss_pred             eeEecC-CCCCc--eEEECCCCCEEEEEECCCCCEEEEEEECCCCcE-----eecceeeeCCCCeEEEEc
Confidence            333333 22222  456678899988887 67899997665  4431     222222334578888886

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.78  E-value=5.9e-18  Score=146.49  Aligned_cols=231  Identities=11%  Similarity=0.043  Sum_probs=144.0

Q ss_pred             eEEEEeeeccCCCCCEEEEecC---------CCeEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGS---------RAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~---------dg~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      +.+++||||+    ++|+.++.         ++.|++||+++++.+  ..+   ...+..++|+| +|+.|+.+. ++.|
T Consensus        62 ~~~~~~SpDg----~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i  132 (719)
T 1z68_A           62 ASNYGLSPDR----QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNI  132 (719)
T ss_dssp             CSEEEECTTS----SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEE
T ss_pred             eeeEEECCCC----CeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECC-CCCEEEEEE-CCeE
Confidence            8899999999    48888876         789999999988762  222   35688999999 999999885 7899


Q ss_pred             EEEECCCcceeeeeccccCCCCce-----------------EEEEEccCCCEEEEEecCC--------------------
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEV-----------------LSADFDLLGTKIMSCGMDH--------------------  124 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~l~~~~~d~--------------------  124 (291)
                      ++||+.+++......  .++...|                 .+++|+|||++|++++.|.                    
T Consensus       133 ~~~~~~~g~~~~l~~--~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~  210 (719)
T 1z68_A          133 YLKQRPGDPPFQITF--NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI  210 (719)
T ss_dssp             EEESSTTSCCEECCC--CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred             EEEeCCCCCcEEEec--CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence            999998887654331  2333222                 4899999999999988652                    


Q ss_pred             --------------cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe
Q psy10348        125 --------------SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK  188 (291)
Q Consensus       125 --------------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  188 (291)
                                    .|++||+.+++....+.                    ...-..+..|...+..++|+  +.++++.
T Consensus       211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~SpD~~~~~~~  270 (719)
T 1z68_A          211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE--------------------VPVPAMIASSDYYFSWLTWVTDERVCLQW  270 (719)
T ss_dssp             EEECCBTTSCCCEEEEEEEESSCHHHHCCEE--------------------CCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred             eecCCCCCCCCCeeEEEEEECCCCCccceeE--------------------ccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence                          67778877766420000                    00001122477889999998  4455553


Q ss_pred             cC--C--CeEEEec----CCCCCccccccCCCceeeeeeecCCcccEE---EEEEEecCCCcEEEE--EcCCC--cEEEE
Q psy10348        189 SC--E--NCIICWK----PGRLEDKELRTNETNVTIINRLNFKDCEIW---FIRFSMDYWQKILAV--GNQSG--RTYVW  253 (291)
Q Consensus       189 ~~--d--~~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~l~~--~~~dg--~i~vw  253 (291)
                      ..  +  ..|.+||    ..+++...+..        .....+...+.   .....++|||+.|+.  ...+|  .|.+|
T Consensus       271 ~~~~~~~~~l~~~d~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~  342 (719)
T 1z68_A          271 LKRVQNVSVLSICDFREDWQTWDCPKTQE--------HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI  342 (719)
T ss_dssp             EESSTTEEEEEEEEECSSSSSEECCGGGE--------EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred             eccccCeEEEEEEcccCCCCCCceEEEEe--------cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence            22  2  3588899    66554321110        00012222222   002345677986544  44555  56677


Q ss_pred             EcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        254 DLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       254 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      |+.+++.     ..+.  .+...+..+.++ +++.|+
T Consensus       343 ~~~~~~~-----~~lt--~~~~~v~~~~~~-d~~~i~  371 (719)
T 1z68_A          343 KDTVENA-----IQIT--SGKWEAINIFRV-TQDSLF  371 (719)
T ss_dssp             SSCSTTC-----EECS--CSSSCEEEEEEE-CSSEEE
T ss_pred             ECCCCce-----Eecc--cCceEEEEEEEE-eCCEEE
Confidence            7766541     2222  233456677777 776654

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.77  E-value=8e-16  Score=117.29  Aligned_cols=216  Identities=10%  Similarity=0.019  Sum_probs=150.9

Q ss_pred             CCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCc
Q psy10348         26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE  104 (291)
Q Consensus        26 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  104 (291)
                      +++|++++.++.|.+||.++|+.+..+..+. ..+.++.+.| ++++++  +.++.|..||. +++.+..+.  .+....
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~--~~~~~~   78 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIA--APAGCE   78 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEE--CCTTCE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEc--CCCCcc
Confidence            3599999999999999999999999998765 4789999999 889888  34778999999 799888883  122357


Q ss_pred             eEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348        105 VLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--  181 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  181 (291)
                      +.++.+.++|+++++.+. ++.+..+|. +++.+..+...    ...                  ..+......+++.  
T Consensus        79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~----~~~------------------~~~~~~~~~v~~~~~  135 (276)
T 3no2_A           79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE----TGI------------------ERPHAQFRQINKNKK  135 (276)
T ss_dssp             EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC----CSC------------------SSGGGSCSCCEECTT
T ss_pred             ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc----CCC------------------CcccccccCceECCC
Confidence            889999999999999887 777877775 56655443210    000                  0011122233343  


Q ss_pred             CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348        182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      |+++++...++.|..||.. ++.            +.++..... ...  ....++++++++++.++.|..+|..+++.+
T Consensus       136 G~~lv~~~~~~~v~~~d~~-G~~------------~w~~~~~~~-~~~--~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~  199 (276)
T 3no2_A          136 GNYLVPLFATSEVREIAPN-GQL------------LNSVKLSGT-PFS--SAFLDNGDCLVACGDAHCFVQLNLESNRIV  199 (276)
T ss_dssp             SCEEEEETTTTEEEEECTT-SCE------------EEEEECSSC-CCE--EEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred             CCEEEEecCCCEEEEECCC-CCE------------EEEEECCCC-ccc--eeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence            8899999999999999987 643            555554322 222  344577999999998889999999988632


Q ss_pred             cceeEEEeccc----cccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPR----CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~  290 (291)
                          ..+....    ....+.+++..++|++++
T Consensus       200 ----w~~~~~~~~~~~l~~~~~~~~~~~G~i~v  228 (276)
T 3no2_A          200 ----RRVNANDIEGVQLFFVAQLFPLQNGGLYI  228 (276)
T ss_dssp             ----EEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred             ----EEecCCCCCCccccccccceEcCCCCEEE
Confidence                2222110    112356666666766655

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.76  E-value=1.1e-15  Score=131.92  Aligned_cols=226  Identities=12%  Similarity=-0.046  Sum_probs=145.4

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCC-----eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCe------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRA-----VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT------   80 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~------   80 (291)
                      .+..++||||+.    +||.+..++     .|++||+.+++.+.....+ ..+..++|+| |++.|+.++.++.      
T Consensus       126 ~~~~~~~SPDg~----~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~  199 (710)
T 2xdw_A          126 ALRGYAFSEDGE----YFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKSDG  199 (710)
T ss_dssp             EEEEEEECTTSS----EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred             EEEEEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccccc
Confidence            578899999994    887765543     8999999999876643322 2377899999 8898888887765      


Q ss_pred             ----------EEEEECCCccee--eeeccccCCCCceEEEEEccCCCEEEEEec-----CCcEEEEeccC------ch-h
Q psy10348         81 ----------LRLWNIKTDICI--AIFGGVEGHRDEVLSADFDLLGTKIMSCGM-----DHSLKLWDLTK------PE-I  136 (291)
Q Consensus        81 ----------i~vwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~------~~-~  136 (291)
                                |++|++.+++..  ..+. ...+...+..+.|+|+|++|+.++.     +..|.+||+.+      +. .
T Consensus       200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~  278 (710)
T 2xdw_A          200 TETSTNLHQKLYYHVLGTDQSEDILCAE-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK  278 (710)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred             cccccCCCCEEEEEECCCCcccceEEec-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence                      999999877632  2221 1335566889999999999888765     56899999876      32 1


Q ss_pred             hhhhccccccCCCCccccccCccccCcccccccccCcceeEE-EEcCCEEEEecC----CCeEEEecCCCCCccccccCC
Q psy10348        137 KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCV-RWLGDFVLSKSC----ENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      ...+.                            .+...+... .-.|+.|+..+.    ...|.+||+.+....      
T Consensus       279 ~~~l~----------------------------~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~------  324 (710)
T 2xdw_A          279 WVKLI----------------------------DNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES------  324 (710)
T ss_dssp             CEEEE----------------------------CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG------
T ss_pred             eEEee----------------------------CCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc------
Confidence            11111                            122222222 222665554443    347999998775320      


Q ss_pred             CceeeeeeecCCcc--cEEEEEEEecCCCcEEEEEcCCCc--EEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348        212 TNVTIINRLNFKDC--EIWFIRFSMDYWQKILAVGNQSGR--TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       212 ~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l~~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  287 (291)
                          ....+..+..  .+..+.+  .+++.++++...|+.  |.+|++.+++.    ...+.  .+.+.+..++++|+++
T Consensus       325 ----~~~~l~~~~~~~~~~~~~~--~~~~~lv~~~~~~g~~~l~~~~~~~g~~----~~~l~--~~~~~v~~~~~s~d~~  392 (710)
T 2xdw_A          325 ----KWKVLVPEHEKDVLEWVAC--VRSNFLVLCYLHDVKNTLQLHDLATGAL----LKIFP--LEVGSVVGYSGQKKDT  392 (710)
T ss_dssp             ----GCEEEECCCSSCEEEEEEE--ETTTEEEEEEEETTEEEEEEEETTTCCE----EEEEC--CCSSEEEEEECCTTCS
T ss_pred             ----cceeccCCCCCCeEEEEEE--EcCCEEEEEEEECCEEEEEEEECCCCCE----EEecC--CCCceEEEEecCCCCC
Confidence                0122333322  3444444  456788888888885  56667656542    23333  2356788999999987


Q ss_pred             eee
Q psy10348        288 VLL  290 (291)
Q Consensus       288 ~l~  290 (291)
                      .|+
T Consensus       393 ~l~  395 (710)
T 2xdw_A          393 EIF  395 (710)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            664

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.75  E-value=2.5e-15  Score=119.22  Aligned_cols=242  Identities=10%  Similarity=0.019  Sum_probs=150.7

Q ss_pred             EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEeec-
Q psy10348         15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVSK-   77 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~-   77 (291)
                      .++|+|++    ++++++.          .++.|.+||..+++.+..+...      ......++++| ++++|+++.. 
T Consensus        54 ~i~~spdg----~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~  128 (361)
T 2oiz_A           54 HVQVSNDG----KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNAS  128 (361)
T ss_dssp             EEEECTTS----SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEES
T ss_pred             ceEECCCC----CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCC
Confidence            88999998    4888775          3678999999999988887643      24567899999 8999988864 


Q ss_pred             -CCeEEEEECCCcceeee-eccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccC-chhhhhhccccccCC-----
Q psy10348         78 -DHTLRLWNIKTDICIAI-FGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNP-----  148 (291)
Q Consensus        78 -dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~-----  148 (291)
                       ++.|.+||+.+++.+.. +.    .. ....+.+.|++ ..+++.+.||.+.+|++.. ++..........+.+     
T Consensus       129 ~~~~v~v~d~~~~~~~~~~i~----~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~  203 (361)
T 2oiz_A          129 PATSIGIVDVAKGDYVEDVTA----AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI  203 (361)
T ss_dssp             SSEEEEEEETTTTEEEEEEGG----GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB
T ss_pred             CCCeEEEEECCCCcEEEEEec----CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce
Confidence             57899999999988777 52    22 22335567765 5778888899999998865 433211100001111     


Q ss_pred             ------CCccccccCccccCc----------cccccc------c----cCcceeEEEEc--CCEEEEecC----------
Q psy10348        149 ------ARSTRPFDTQKEHFP----------QFSTRD------I----HRNYVDCVRWL--GDFVLSKSC----------  190 (291)
Q Consensus       149 ------~~~~~~~~~~~~~~~----------~~~~~~------~----~~~~v~~~~~~--~~~l~~~~~----------  190 (291)
                            ++....+........          ......      .    .......++|+  ++.+++...          
T Consensus       204 ~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~  283 (361)
T 2oiz_A          204 FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF  283 (361)
T ss_dssp             CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred             EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence                  110100000000000          000000      0    00111125666  455555432          


Q ss_pred             -CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe
Q psy10348        191 -ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS  269 (291)
Q Consensus       191 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  269 (291)
                       .+.|.+||+.+.+            .+.++..+.  .+.+.  ++|||++|++++. +.|.+||..+++.  +  ..-.
T Consensus       284 ~~~~v~viD~~t~~------------~v~~i~~~~--p~~ia--~spdg~~l~v~n~-~~v~v~D~~t~~l--~--~~~~  342 (361)
T 2oiz_A          284 PAAEIWVMDTKTKQ------------RVARIPGRD--ALSMT--IDQQRNLMLTLDG-GNVNVYDISQPEP--K--LLRT  342 (361)
T ss_dssp             CCSEEEEEETTTTE------------EEEEEECTT--CCEEE--EETTTTEEEEECS-SCEEEEECSSSSC--E--EEEE
T ss_pred             CCceEEEEECCCCc------------EEEEEecCC--eeEEE--ECCCCCEEEEeCC-CeEEEEECCCCcc--e--eeEE
Confidence             3589999998874            367776665  44544  4577999999887 9999999998721  1  1111


Q ss_pred             ccccccceeeeEEccCCc
Q psy10348        270 HPRCMSAVRQTTLSKNGN  287 (291)
Q Consensus       270 ~~~~~~~v~~~~~s~~g~  287 (291)
                      ..........++++|+|.
T Consensus       343 i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          343 IEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             ETTSCSSEEEEEECCCSC
T ss_pred             eccCCCCcEEEEecCCCC
Confidence            124456778999999986

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.75  E-value=7.1e-15  Score=115.45  Aligned_cols=234  Identities=12%  Similarity=-0.010  Sum_probs=149.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC----CeEEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD----HTLRLWN   85 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~vwd   85 (291)
                      ...+.+++|++++    .+++++..++.|.+||.++++.......+...+.+++++| +++++++...+    +.|.+||
T Consensus        44 ~~~~~~~~~~~~g----~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d  118 (333)
T 2dg1_A           44 GLQLEGLNFDRQG----QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT  118 (333)
T ss_dssp             CCCEEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC
T ss_pred             CccccCcEECCCC----CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe
Confidence            3456889999887    4788888899999999988876554445667899999999 88888877666    6899999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec------CCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      ..++.....+.. ..+...+.+++++|+|+++++...      .+.|..+|..+++.....                   
T Consensus       119 ~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------------------  178 (333)
T 2dg1_A          119 ENGDNLQDIIED-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-------------------  178 (333)
T ss_dssp             TTSCSCEEEECS-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-------------------
T ss_pred             CCCCEEEEEEcc-CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-------------------
Confidence            987765433311 134567899999999987776653      245555655443321110                   


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCC-CccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRL-EDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                                .+...+..++|+  ++.+ ++.+.++.|.+||+... .......    ......+..+ ...  -.++++
T Consensus       179 ----------~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~----~~~~~~~~~~-~~~--~~i~~d  241 (333)
T 2dg1_A          179 ----------QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG----ATIPYYFTGH-EGP--DSCCID  241 (333)
T ss_dssp             ----------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE----EEEEEECCSS-SEE--EEEEEB
T ss_pred             ----------cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccccc----ceEEEecCCC-CCC--CceEEC
Confidence                      022236678887  5544 45556889999998642 2110000    0001111211 122  235667


Q ss_pred             CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc----ccccceeeeEEccCCceee
Q psy10348        236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP----RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++|+++++...++.|.+||.. ++    ....+...    ++...+.+++|+||++.|.
T Consensus       242 ~~G~l~v~~~~~~~v~~~d~~-g~----~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~  295 (333)
T 2dg1_A          242 SDDNLYVAMYGQGRVLVFNKR-GY----PIGQILIPGRDEGHMLRSTHPQFIPGTNQLI  295 (333)
T ss_dssp             TTCCEEEEEETTTEEEEECTT-SC----EEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred             CCCCEEEEEcCCCEEEEECCC-CC----EEEEEEcCCCccccccCcceEEECCCCCEEE
Confidence            889988887788999999984 32    22333321    1222688999999986653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.74  E-value=4.2e-16  Score=124.09  Aligned_cols=222  Identities=9%  Similarity=0.057  Sum_probs=136.1

Q ss_pred             EEEEecCC--CeEEEEcc--CCcceeEE--Ee-eeccceeEEEEecCCCcEEEEeecCCeEEEEECC-Ccceeeeecccc
Q psy10348         28 LLAVAGSR--AVIRIFSP--AFHACVRH--FY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK-TDICIAIFGGVE   99 (291)
Q Consensus        28 ~l~~~~~d--g~i~vw~~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~   99 (291)
                      .+++|+..  +.|.+|++  +++++...  .. .....+..++|+| ++++|++++.+ .|.+|++. +++....... .
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~-~   80 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASH-P   80 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEE-E
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEe-e
Confidence            45566543  56888765  45654221  11 1234688999999 88999998887 99999997 6765443210 1


Q ss_pred             CCCCceEEEEEccCCCE--EEEEe-------------cCCcEEEEeccC-chhhhhhccccccCCCCccccccCccccCc
Q psy10348        100 GHRDEVLSADFDLLGTK--IMSCG-------------MDHSLKLWDLTK-PEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus       100 ~~~~~i~~~~~~~~~~~--l~~~~-------------~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      .+ +.+.+++|+|+|++  ++++.             .++.+.+|++.. ++....+.. .                   
T Consensus        81 ~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~-~-------------------  139 (365)
T 1jof_A           81 IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN-Y-------------------  139 (365)
T ss_dssp             CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE-E-------------------
T ss_pred             cC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee-E-------------------
Confidence            11 23556899999994  45553             689999999974 443221110 0                   


Q ss_pred             ccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCC-CCCccccccCCCceeeeeeecC--CcccEEEEEEEecCC
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPG-RLEDKELRTNETNVTIINRLNF--KDCEIWFIRFSMDYW  237 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~  237 (291)
                          ...+...+.+++|+  |++++++. .++.|.+||+. +++.          ..+..+..  +......  ++++|+
T Consensus       140 ----~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~----------~~~~~~~~~~~g~~p~~--~~~spd  203 (365)
T 1jof_A          140 ----EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV----------ELVGSVDAPDPGDHPRW--VAMHPT  203 (365)
T ss_dssp             ----ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE----------EEEEEEECSSTTCCEEE--EEECTT
T ss_pred             ----EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE----------EEeeeEecCCCCCCCCE--eEECCC
Confidence                00134568889998  66777655 46899999997 4432          11233321  2333443  456788


Q ss_pred             CcEEEEEc-CCCcEEEEEcCC--CCCCcceeEEEe-cc----cccc------ceeeeE-EccCCceee
Q psy10348        238 QKILAVGN-QSGRTYVWDLDV--QDPSSIKFQILS-HP----RCMS------AVRQTT-LSKNGNVLL  290 (291)
Q Consensus       238 ~~~l~~~~-~dg~i~vwd~~~--~~~~~~~~~~~~-~~----~~~~------~v~~~~-~s~~g~~l~  290 (291)
                      |++|++++ .++.|.+|++..  ++... ....+. .+    ++..      .+.+++ |+|||++|+
T Consensus       204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~  270 (365)
T 1jof_A          204 GNYLYALMEAGNRICEYVIDPATHMPVY-THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF  270 (365)
T ss_dssp             SSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred             CCEEEEEECCCCeEEEEEEeCCCCcEEE-ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence            99998876 478999998763  32100 001121 11    2222      588999 999999875

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.74  E-value=1.1e-15  Score=121.33  Aligned_cols=103  Identities=7%  Similarity=0.013  Sum_probs=82.8

Q ss_pred             CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec----------CCeEEEEECCCcceeeeeccccC---
Q psy10348         34 SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK----------DHTLRLWNIKTDICIAIFGGVEG---  100 (291)
Q Consensus        34 ~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~---  100 (291)
                      .|+.|.+||..+++.+..+..+..+  .++|+| +++++++++.          ++.|.+||..+++.+..+.....   
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~  105 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ  105 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence            4789999999999998888876665  899999 8898888763          67799999998888777632111   


Q ss_pred             CCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhh
Q psy10348        101 HRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDA  139 (291)
Q Consensus       101 ~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~  139 (291)
                      +......++++|+|++|+++..  ++.|.+||+.+++.+..
T Consensus       106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~  146 (361)
T 2oiz_A          106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED  146 (361)
T ss_dssp             BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred             cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence            2345678999999999998874  58999999999887665

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.73  E-value=3.3e-15  Score=115.45  Aligned_cols=224  Identities=12%  Similarity=-0.031  Sum_probs=147.4

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      +.....+++|+|+++   .+++++..++.|..|+..++  ...+..+...+.++++++ ++.++++...++.|.+||..+
T Consensus        26 ~~~~~eg~~~d~~g~---~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~   99 (296)
T 3e5z_A           26 GFTWTEGPVYVPARS---AVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPG   99 (296)
T ss_dssp             CCSSEEEEEEEGGGT---EEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTT
T ss_pred             CCccccCCeEeCCCC---EEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCC
Confidence            445677899999983   37888888999999999877  666766778899999999 888888777778999999987


Q ss_pred             cceeeeeccccC-CCCceEEEEEccCCCEEEEE----ec-------------CCcEEEEeccCchhhhhhccccccCCCC
Q psy10348         89 DICIAIFGGVEG-HRDEVLSADFDLLGTKIMSC----GM-------------DHSLKLWDLTKPEIKDACAESYTFNPAR  150 (291)
Q Consensus        89 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~----~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~  150 (291)
                      ++.......... ....+..++++|+|+++++.    +.             .+.|..++.. ++.. .+          
T Consensus       100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~----------  167 (296)
T 3e5z_A          100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-AP----------  167 (296)
T ss_dssp             CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EE----------
T ss_pred             CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Ee----------
Confidence            875543311111 12346789999999988873    31             2344444443 2211 11          


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCC-CCCc-cccccCCCceeeeeeecCCccc
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPG-RLED-KELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                        ..+......++|+  ++.+++.+.++.|.+|++. .+.. .         . ...+......
T Consensus       168 ------------------~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~---------~-~~~~~~~~~~  219 (296)
T 3e5z_A          168 ------------------IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEY---------Q-GVHFTVEPGK  219 (296)
T ss_dssp             ------------------ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEE---------E-EEEECCSSSC
T ss_pred             ------------------ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcC---------C-CeEeeCCCCC
Confidence                              1133446788897  6677778888999999986 2221 0         0 1111112222


Q ss_pred             EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE-ccCCceee
Q psy10348        227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL-SKNGNVLL  290 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~  290 (291)
                      +.  .++++++|+++++.  ++.|.+|+.. ++    ....+.  .+.. +.+++| +|+++.|.
T Consensus       220 p~--~i~~d~~G~l~v~~--~~~v~~~~~~-g~----~~~~~~--~~~~-~~~~~f~~~d~~~L~  272 (296)
T 3e5z_A          220 TD--GLRVDAGGLIWASA--GDGVHVLTPD-GD----ELGRVL--TPQT-TSNLCFGGPEGRTLY  272 (296)
T ss_dssp             CC--SEEEBTTSCEEEEE--TTEEEEECTT-SC----EEEEEE--CSSC-CCEEEEESTTSCEEE
T ss_pred             CC--eEEECCCCCEEEEc--CCeEEEECCC-CC----EEEEEE--CCCC-ceeEEEECCCCCEEE
Confidence            22  25567889866666  7889999986 32    223333  2334 889999 58888664

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.73  E-value=7.1e-16  Score=132.87  Aligned_cols=225  Identities=10%  Similarity=-0.004  Sum_probs=142.7

Q ss_pred             ceeEEEEeeeccCCCCCEEE-----EecCCCeEEEEccCCcceeEEEeeeccce--eEEEEecCCCcEEEEeecCCe---
Q psy10348         11 ENFYTCAWSMDLESGRPLLA-----VAGSRAVIRIFSPAFHACVRHFYGHGHAI--NELKFHPQDFNLLLSVSKDHT---   80 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~-----~~~~dg~i~vw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~dg~---   80 (291)
                      ..+.+++||||+.    +||     .|+.+..|++||+++++.+.  ..+...+  ..++|+| +++.|+.++.|..   
T Consensus       121 ~~~~~~~~SPDG~----~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~  193 (695)
T 2bkl_A          121 VSLGTWAVSWDGK----KVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSI  193 (695)
T ss_dssp             EEEEEEEECTTSS----EEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTS
T ss_pred             EEEEEEEECCCCC----EEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCC
Confidence            3688999999994    777     44445789999999988651  1122222  6899999 8899998888765   


Q ss_pred             ----------EEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEecCC----cEEEEeccCchhhhhhcccc
Q psy10348         81 ----------LRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH----SLKLWDLTKPEIKDACAESY  144 (291)
Q Consensus        81 ----------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~  144 (291)
                                |++|++.++..  ...+ ....+...+..+.|+|+|++|+.++.++    .|.+||..+++.. .+.   
T Consensus       194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~-~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~---  268 (695)
T 2bkl_A          194 KVDERPGYTTIRYHTLGTEPSKDTVVH-ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV---  268 (695)
T ss_dssp             CGGGGGGGCEEEEEETTSCGGGCEEEE-CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE---
T ss_pred             ccccCCCCCEEEEEECCCCchhceEEE-ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee---
Confidence                      99999988762  2222 1134566889999999999998887666    5666655443321 111   


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEec---CCCeEEEecCCCCCccccccCCCceeeeeee
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKS---CENCIICWKPGRLEDKELRTNETNVTIINRL  220 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  220 (291)
                                               .+...+....+. +++++...   .++.|.+||+.+....          ....+
T Consensus       269 -------------------------~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~----------~~~~l  313 (695)
T 2bkl_A          269 -------------------------KGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARA----------SWKEI  313 (695)
T ss_dssp             -------------------------ECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGG----------GCEEE
T ss_pred             -------------------------cCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCcc----------CCeEE
Confidence                                     122233334444 55444433   2589999999775421          01122


Q ss_pred             cCC--cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC-CCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        221 NFK--DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV-QDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       221 ~~~--~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..+  ...+..+.+  + ++.++++...|+..++|.+.. ++    ....+.. ...+.+..++++|+++.|+
T Consensus       314 ~~~~~~~~l~~~~~--~-~~~lv~~~~~dg~~~l~~~~~~g~----~~~~l~~-~~~~~v~~~~~s~d~~~l~  378 (695)
T 2bkl_A          314 VPEDSSASLLSVSI--V-GGHLSLEYLKDATSEVRVATLKGK----PVRTVQL-PGVGAASNLMGLEDLDDAY  378 (695)
T ss_dssp             ECCCSSCEEEEEEE--E-TTEEEEEEEETTEEEEEEEETTCC----EEEECCC-SSSSEECCCBSCTTCSEEE
T ss_pred             ecCCCCCeEEEEEE--E-CCEEEEEEEECCEEEEEEEeCCCC----eeEEecC-CCCeEEEEeecCCCCCEEE
Confidence            222  233444444  3 478889999999988887652 32    1122221 2246788899999998765

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.72  E-value=7.2e-17  Score=129.73  Aligned_cols=219  Identities=11%  Similarity=0.004  Sum_probs=135.2

Q ss_pred             eEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +.+++|||++    ++|+....   +..|.+||+.+++.......+......+.|+| +++.|+.++.++.|.+||+.++
T Consensus        38 ~~~~~~SpdG----~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~  112 (396)
T 3c5m_A           38 FYQKCFTQDG----KKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETL  112 (396)
T ss_dssp             TTSCCBCTTS----CEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTC
T ss_pred             eecCcCCCCC----CEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCC
Confidence            6678899988    47666543   34788999988775443333323333488999 9999999999999999999988


Q ss_pred             ceeeeeccccCCCCceEE-------------------EEEccCCCEEEEE-----ecCCcEEEEeccCchhhhhhccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLS-------------------ADFDLLGTKIMSC-----GMDHSLKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~d~~i~v~d~~~~~~~~~~~~~~~  145 (291)
                      +.....   ..+......                   +.|+|+++.++.+     ..+..|.+||+.+++.....     
T Consensus       113 ~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-----  184 (396)
T 3c5m_A          113 EEQVIY---TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-----  184 (396)
T ss_dssp             CEEEEE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-----
T ss_pred             CcEEEE---ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-----
Confidence            765554   223332222                   3456666655543     34567888888776532211     


Q ss_pred             cCCCCccccccCccccCcccccccccCcceeEEEEcC---CEEEEecCC------CeEEEecCCCCCccccccCCCceee
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG---DFVLSKSCE------NCIICWKPGRLEDKELRTNETNVTI  216 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~  216 (291)
                                              .+...+..+.|++   +.|+..+.+      ..|.+||+.....            
T Consensus       185 ------------------------~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~------------  228 (396)
T 3c5m_A          185 ------------------------QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV------------  228 (396)
T ss_dssp             ------------------------EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC------------
T ss_pred             ------------------------cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce------------
Confidence                                    1445577788864   345544432      4688888765432            


Q ss_pred             eeeecCCcccEEEEEEEecCCCcEEEEEcCC-----CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceee
Q psy10348        217 INRLNFKDCEIWFIRFSMDYWQKILAVGNQS-----GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLL  290 (291)
Q Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~  290 (291)
                       ..+..+..........++|+|++|+.++.+     +.|++||+.+++.    .......+    .. ++|+| ||++|+
T Consensus       229 -~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~----~~-~~~s~~dg~~l~  298 (396)
T 3c5m_A          229 -RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN----EEVMVMPP----CS-HLMSNFDGSLMV  298 (396)
T ss_dssp             -EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE----EEEEECCS----EE-EEEECSSSSEEE
T ss_pred             -eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe----EEeeeCCC----CC-CCccCCCCceEE
Confidence             112112112223345677889988777543     4599999988742    12222222    22 89999 999876

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.71  E-value=2.8e-16  Score=126.32  Aligned_cols=219  Identities=10%  Similarity=0.002  Sum_probs=139.2

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeE-------------------EEEecCCCcEEEEe
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINE-------------------LKFHPQDFNLLLSV   75 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~s~   75 (291)
                      .+.|+|++    +.|+.++.++.|++||+.+++.......+......                   +.|+| +++.++.+
T Consensus        85 ~~~~spdg----~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~  159 (396)
T 3c5m_A           85 GGFISTDE----RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFA  159 (396)
T ss_dssp             TCEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHH
T ss_pred             cceECCCC----CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeee
Confidence            37789988    58988888889999999988766555544332222                   34566 55555543


Q ss_pred             -----ecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecC------CcEEEEeccCchhhhhhccc
Q psy10348         76 -----SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMD------HSLKLWDLTKPEIKDACAES  143 (291)
Q Consensus        76 -----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~  143 (291)
                           ..+..|.+||+.+++.....    .+...+..+.|+| +++.|+..+.+      ..|.+||+..++......  
T Consensus       160 ~~~~~~~~~~l~~~d~~~g~~~~~~----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--  233 (396)
T 3c5m_A          160 EFYHTNPTCRLIKVDIETGELEVIH----QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--  233 (396)
T ss_dssp             HHHHTCCCEEEEEEETTTCCEEEEE----EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--
T ss_pred             eeccCCCcceEEEEECCCCcEEeec----cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--
Confidence                 35668999999987765544    4667889999999 78877766543      358888876544211100  


Q ss_pred             cccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC-----CeEEEecCCCCCccccccCCCceee
Q psy10348        144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTI  216 (291)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~  216 (291)
                                               ......+..+.|+  |++|+..+.+     +.|.+||+.+++.          ..
T Consensus       234 -------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----------~~  278 (396)
T 3c5m_A          234 -------------------------HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN----------EE  278 (396)
T ss_dssp             -------------------------CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE----------EE
T ss_pred             -------------------------cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe----------EE
Confidence                                     0012347778888  6666665443     5599999987653          11


Q ss_pred             eeeecCCcccEEEEEEEecC-CCcEEEEEc----------------CCCcEEEEEcCCCCCCcceeEEEecccc------
Q psy10348        217 INRLNFKDCEIWFIRFSMDY-WQKILAVGN----------------QSGRTYVWDLDVQDPSSIKFQILSHPRC------  273 (291)
Q Consensus       217 ~~~~~~~~~~i~~~~~~~~~-~~~~l~~~~----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~------  273 (291)
                      +..+..    ..   ..++| +|++++.++                .++.|++||+.+++..    ........      
T Consensus       279 l~~~~~----~~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~  347 (396)
T 3c5m_A          279 VMVMPP----CS---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ----KLCKHSTSWDVLDG  347 (396)
T ss_dssp             EEECCS----EE---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC----EEEECCCCCCCBTT
T ss_pred             eeeCCC----CC---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE----EccCCCCccccccc
Confidence            222221    11   34556 799888754                3478999999887531    22221110      


Q ss_pred             --ccceeeeEEccCCceee
Q psy10348        274 --MSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       274 --~~~v~~~~~s~~g~~l~  290 (291)
                        ...+..++|+|||+.|+
T Consensus       348 ~~~~~~~~~~~s~dg~~l~  366 (396)
T 3c5m_A          348 DRQITHPHPSFTPNDDGVL  366 (396)
T ss_dssp             BSSTTCCCCEECTTSSEEE
T ss_pred             cccCCCCCceEccCCCeEE
Confidence              00256789999999876

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.71  E-value=8.6e-16  Score=131.76  Aligned_cols=230  Identities=8%  Similarity=-0.067  Sum_probs=146.8

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEe--cCCCeEEEEccCCcceeEEEeeecccee---------EEEEe--cCCCcE-EE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVA--GSRAVIRIFSPAFHACVRHFYGHGHAIN---------ELKFH--PQDFNL-LL   73 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~--~~dg~i~vw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~-l~   73 (291)
                      .|...+..++|+++.    -+++..  +.++...||....+...+.+..|...+.         ...|+  | |++. |+
T Consensus        21 ~~~~~~~~~~~s~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la   95 (662)
T 3azo_A           21 SRSGRPACVGAVGDE----VWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLV   95 (662)
T ss_dssp             HTCSCCEEEEEETTE----EEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEE
T ss_pred             hcCCccceeEEcCCe----EEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEE
Confidence            357789999999876    356666  5678999998655555566666666666         66676  8 7777 66


Q ss_pred             Eeec-CCeEEEEECC--C-cceeeeeccccC-----CCCceEEEEEccCCCEEEEEecC----------CcEEEEeccC-
Q psy10348         74 SVSK-DHTLRLWNIK--T-DICIAIFGGVEG-----HRDEVLSADFDLLGTKIMSCGMD----------HSLKLWDLTK-  133 (291)
Q Consensus        74 s~~~-dg~i~vwd~~--~-~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------~~i~v~d~~~-  133 (291)
                      .++. +..|.++++.  . +. ...+   ..     |...+..++|+|+|+.|++++.|          ..|++||+.+ 
T Consensus        96 ~~~~~~~~l~~~~~~~~g~~~-~~~l---~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~  171 (662)
T 3azo_A           96 FTHFGDQRLYAFEPDAPGGAV-PRPL---TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS  171 (662)
T ss_dssp             EEBTTTCCEEEECTTSTTCCC-CEEC---SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred             EEECCCCeEEEEcCCCCCCCC-CEec---cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence            5543 5667777765  2 33 3344   23     67788999999999999998877          5899999987 


Q ss_pred             -----chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC--------CeEEEec
Q psy10348        134 -----PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE--------NCIICWK  198 (291)
Q Consensus       134 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d--------~~i~iwd  198 (291)
                           ++.....                            ..+...+..++|+  |++|+..+.+        ..|.+||
T Consensus       172 ~~~~~~~~~~l~----------------------------~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d  223 (662)
T 3azo_A          172 AAADRSAVRELS----------------------------DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTAR  223 (662)
T ss_dssp             TTTCGGGSEESS----------------------------CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEE
T ss_pred             ccccCCceeEEE----------------------------ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEE
Confidence                 4422111                            0134567778888  7788776644        4899999


Q ss_pred             CC-CCCccccccCCCceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCC--cEEEEEcCCCCCCcceeEEEecccc-
Q psy10348        199 PG-RLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSG--RTYVWDLDVQDPSSIKFQILSHPRC-  273 (291)
Q Consensus       199 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~-  273 (291)
                      +. ++..          .....+ ..+...+..  ..++|||+++++++.++  .|.+||+.+++.    ..+...... 
T Consensus       224 ~~~~g~~----------~~~~~l~~~~~~~~~~--~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~----~~l~~~~~~~  287 (662)
T 3azo_A          224 VTEDGRF----------ADTRTLLGGPEEAIAQ--AEWAPDGSLIVATDRTGWWNLHRVDPATGAA----TQLCRREEEF  287 (662)
T ss_dssp             ECTTSCE----------EEEEEEEEETTBCEEE--EEECTTSCEEEEECTTSSCEEEEECTTTCCE----EESSCCSSBS
T ss_pred             ECCCCcc----------cccEEeCCCCCceEcc--eEECCCCeEEEEECCCCCeEEEEEECCCCce----eecccccccc
Confidence            87 4411          012222 222344444  45667799888888888  566666555531    111111100 


Q ss_pred             -----ccceeeeEEccCCceee
Q psy10348        274 -----MSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       274 -----~~~v~~~~~s~~g~~l~  290 (291)
                           .-.+.+++|+|++++++
T Consensus       288 ~~p~w~~~~~~~~~~~~~~~~~  309 (662)
T 3azo_A          288 AGPLWTPGMRWFAPLANGLIAV  309 (662)
T ss_dssp             SCCCCSTTCCSEEECTTSCEEE
T ss_pred             cCccccccCceEeEeCCCEEEE
Confidence                 01156789999998775

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.71  E-value=1.3e-14  Score=111.47  Aligned_cols=201  Identities=12%  Similarity=0.101  Sum_probs=135.6

Q ss_pred             ceeEEEEee-eccCCCCCEEEEecC-CCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         11 ENFYTCAWS-MDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        11 ~~i~~~~~s-~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      ..+.++++. +++    .++++... ++.|++|| .+++.+..+.. +...+..+++.| +++++++...++.|.+||..
T Consensus        77 ~~p~~i~~~~~~g----~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~  150 (286)
T 1q7f_A           77 LYPNRVAVVRNSG----DIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN  150 (286)
T ss_dssp             SSEEEEEEETTTT----EEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred             cCceEEEEEcCCC----eEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC
Confidence            457788884 555    35555533 88999999 56777766642 335688999999 88888887788999999965


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                       ++.+..+.. ..+...+..++++++|+++++...++.|++||... +.+..+..                         
T Consensus       151 -g~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~-------------------------  202 (286)
T 1q7f_A          151 -GNVLHKFGC-SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGG-------------------------  202 (286)
T ss_dssp             -SCEEEEEEC-TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESC-------------------------
T ss_pred             -CCEEEEeCC-CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEcc-------------------------
Confidence             565555521 23456789999999998878777899999999743 32222110                         


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                       .++...+..++++  ++++++...++ .|.+||... +.            +..+..+........++++|+|+++++ 
T Consensus       203 -~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~------------~~~~~~~~~~~~~~~i~~~~~g~l~vs-  267 (286)
T 1q7f_A          203 -EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QL------------ISALESKVKHAQCFDVALMDDGSVVLA-  267 (286)
T ss_dssp             -TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CE------------EEEEEESSCCSCEEEEEEETTTEEEEE-
T ss_pred             -CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CE------------EEEEcccCCCCcceeEEECCCCcEEEE-
Confidence             1123457788887  66777777775 999999643 22            333333222212234555677987776 


Q ss_pred             cCCCcEEEEEcCCCCC
Q psy10348        245 NQSGRTYVWDLDVQDP  260 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~  260 (291)
                      +.|+.|++|++....+
T Consensus       268 ~~~~~v~v~~~~~~~p  283 (286)
T 1q7f_A          268 SKDYRLYIYRYVQLAP  283 (286)
T ss_dssp             ETTTEEEEEECSCCCC
T ss_pred             CCCCeEEEEEcccccc
Confidence            5689999999876543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.70  E-value=2.3e-15  Score=129.16  Aligned_cols=222  Identities=13%  Similarity=0.060  Sum_probs=138.7

Q ss_pred             EEEee--eccCCCCCE-EEEec-CCCeEEEEccC--C-cceeEEEee-----eccceeEEEEecCCCcEEEEeecC----
Q psy10348         15 TCAWS--MDLESGRPL-LAVAG-SRAVIRIFSPA--F-HACVRHFYG-----HGHAINELKFHPQDFNLLLSVSKD----   78 (291)
Q Consensus        15 ~~~~s--~~~~~~~~~-l~~~~-~dg~i~vw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~d----   78 (291)
                      ...|+  ||+.    . |+.++ .+..|.++++.  . ++ ...+..     |...+..++|+| +++.|+.++.+    
T Consensus        81 ~~~~~~SPDg~----~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~  154 (662)
T 3azo_A           81 PWAGVPRPAGG----PLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGE  154 (662)
T ss_dssp             CEEEECCSSSS----CEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSS
T ss_pred             cceeeeecCCC----eEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCC
Confidence            45565  8884    5 55444 46778888876  3 43 445554     567789999999 89999988876    


Q ss_pred             ------CeEEEEECCC------cceeeeecccc-CCCCceEEEEEccCCCEEEEEecCC--------cEEEEecc-Cch-
Q psy10348         79 ------HTLRLWNIKT------DICIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGMDH--------SLKLWDLT-KPE-  135 (291)
Q Consensus        79 ------g~i~vwd~~~------~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~--------~i~v~d~~-~~~-  135 (291)
                            ..|++||+.+      ++. ..+   . .+...+..++|+|||++|+.++.++        .|++||+. ++. 
T Consensus       155 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~l---~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~  230 (662)
T 3azo_A          155 GPSDVRRFLAAVPLDGSAAADRSAV-REL---SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF  230 (662)
T ss_dssp             STTCEEEEEEEEETTSTTTTCGGGS-EES---SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred             CCCCceeEEEEEECCCCccccCCce-eEE---EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence                  5899999987      443 344   4 5567888899999999999887653        79999998 451 


Q ss_pred             -hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC--eEEEecCCCCCccccccC
Q psy10348        136 -IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN--CIICWKPGRLEDKELRTN  210 (291)
Q Consensus       136 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~  210 (291)
                       ....+.                           ..|...+..+.|+  |++++++..++  .|.+||+.+++...+...
T Consensus       231 ~~~~~l~---------------------------~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~  283 (662)
T 3azo_A          231 ADTRTLL---------------------------GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR  283 (662)
T ss_dssp             EEEEEEE---------------------------EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred             cccEEeC---------------------------CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence             111111                           1245678889998  66778888888  677777655543211111


Q ss_pred             CCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEE--EcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        211 ETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVW--DLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       211 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                      ..... -..+..   .+  ..++++|+++++++++. +.++||  |+.+++     ...+  ..+...+..+ |++++..
T Consensus       284 ~~~~~-~p~w~~---~~--~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-----~~~l--~~~~~~~~~~-~s~~~~~  348 (662)
T 3azo_A          284 EEEFA-GPLWTP---GM--RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-----LVDA--AGPWTEWAAT-LTVSGTR  348 (662)
T ss_dssp             SSBSS-CCCCST---TC--CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-----EEEC--CSSCCEEEEE-EEEETTE
T ss_pred             ccccc-Cccccc---cC--ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-----EEEe--cCCCCeEEEE-EecCCCE
Confidence            00000 000000   01  13556678999999998 999999  444432     1222  2345566655 1444443

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.69  E-value=6.9e-15  Score=116.14  Aligned_cols=206  Identities=13%  Similarity=0.035  Sum_probs=131.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCC---C--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-------
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSR---A--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-------   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~d---g--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-------   78 (291)
                      ..+..++|||++.    .||..+.+   +  .|.+|++.+++....... .. +..++|+| +++.|+.++.+       
T Consensus        59 ~~~~~~~~SpDg~----~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~  131 (347)
T 2gop_A           59 ENATMPRISPDGK----KIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNE-DSRKLLIVGFKRREDEDF  131 (347)
T ss_dssp             ESCEEEEECTTSS----EEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECT-TSSEEEEEEECCCC----
T ss_pred             ccCCCeEECCCCC----EEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECC-CCCEEEEEEccCCCcCCc
Confidence            4567889999984    78777643   2  488889888776554443 34 99999999 88888877642       


Q ss_pred             --------------------CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-------cEEEEec
Q psy10348         79 --------------------HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-------SLKLWDL  131 (291)
Q Consensus        79 --------------------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~v~d~  131 (291)
                                          ..|.+||+.+++.+..+   .. . .+..+.|+|+| +++++..++       ...+|.+
T Consensus       132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l---~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~  205 (347)
T 2gop_A          132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF---EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIW  205 (347)
T ss_dssp             -----CCCC---------CEEEEEEEETTTTEEEEEE---EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred             EEEcccceeecCcccccCccceEEEEECCCCeEEeee---cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEe
Confidence                                56999999888764555   23 3 78899999999 777776542       4455555


Q ss_pred             cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCC--------CeEEEecCCCCC
Q psy10348        132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCE--------NCIICWKPGRLE  203 (291)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~  203 (291)
                      .+++. ..+.                            .+ ..+..+.-+|++|+..+.+        ..|.+||  +++
T Consensus       206 d~~~~-~~l~----------------------------~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~  253 (347)
T 2gop_A          206 EDGKE-EKMF----------------------------EK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE  253 (347)
T ss_dssp             ETTEE-EEEE----------------------------EE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC
T ss_pred             CCCce-EEec----------------------------cC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc
Confidence            43321 1111                            02 2233343347777665543        4788888  332


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      .            ......+...+.. ...++ ++ ++++++.++.+++| +.+++    .....   .+.+.|.+++|+
T Consensus       254 ~------------~~l~~~~~~~~~~-~~~~s-dg-~~~~~~~~~~~~l~-~~~g~----~~~~~---~~~~~v~~~~~s  310 (347)
T 2gop_A          254 V------------MGILDEVDRGVGQ-AKIKD-GK-VYFTLFEEGSVNLY-IWDGE----IKPIA---KGRHWIMGFDVD  310 (347)
T ss_dssp             E------------EESSTTCCSEEEE-EEEET-TE-EEEEEEETTEEEEE-EESSS----EEEEE---CSSSEEEEEEES
T ss_pred             e------------EeccccCCcccCC-ccEEc-Cc-EEEEEecCCcEEEE-EcCCc----eEEEe---cCCCeEEeeeee
Confidence            2            2222233344442 13455 67 88999999999999 87432    22222   235688999999


Q ss_pred             c
Q psy10348        284 K  284 (291)
Q Consensus       284 ~  284 (291)
                      |
T Consensus       311 ~  311 (347)
T 2gop_A          311 E  311 (347)
T ss_dssp             S
T ss_pred             C
Confidence            9

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.69  E-value=3.3e-14  Score=108.20  Aligned_cols=222  Identities=6%  Similarity=-0.058  Sum_probs=142.8

Q ss_pred             eeEEEEeeeccCCCCCEEE-EecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         12 NFYTCAWSMDLESGRPLLA-VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~-~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ...++++++++    .+++ +...++.|.+|+..++........+...+.++++.+ ++.++++.. ++.|.+||.....
T Consensus        25 ~p~~i~~~~~g----~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~   98 (270)
T 1rwi_B           25 SPSGVAVDSAG----NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNN   98 (270)
T ss_dssp             CEEEEEECTTC----CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSC
T ss_pred             CccceEECCCC----CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCce
Confidence            67789999887    4676 557789999999765543221122335678999999 777666655 8899999987544


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      . ..+.  ......+..++++++|+.+++...++.|.+|+..+.......                            ..
T Consensus        99 ~-~~~~--~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~----------------------------~~  147 (270)
T 1rwi_B           99 Q-TVLP--FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP----------------------------FT  147 (270)
T ss_dssp             C-EECC--CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC----------------------------CC
T ss_pred             E-eeee--cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec----------------------------cc
Confidence            3 3331  223367899999999987777777889999975543321100                            01


Q ss_pred             cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      ....+..++++  ++++++...++.|.+||.......            ...........  .++++++|.++++...++
T Consensus       148 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~------------~~~~~~~~~p~--~i~~d~~g~l~v~~~~~~  213 (270)
T 1rwi_B          148 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV------------VLPFTDITAPW--GIAVDEAGTVYVTEHNTN  213 (270)
T ss_dssp             SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE------------ECCCSSCCSEE--EEEECTTCCEEEEETTTS
T ss_pred             cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE------------eecccCCCCce--EEEECCCCCEEEEECCCC
Confidence            22345677887  666666666889999998765321            11111112233  456677788778777889


Q ss_pred             cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .|.+|+......     .... ..+...+.+++++++|++++
T Consensus       214 ~v~~~~~~~~~~-----~~~~-~~~~~~p~~i~~~~~g~l~v  249 (270)
T 1rwi_B          214 QVVKLLAGSTTS-----TVLP-FTGLNTPLAVAVDSDRTVYV  249 (270)
T ss_dssp             CEEEECTTCSCC-----EECC-CCSCSCEEEEEECTTCCEEE
T ss_pred             cEEEEcCCCCcc-----eeec-cCCCCCceeEEECCCCCEEE
Confidence            999999876532     1111 12235688999999998665

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.69  E-value=6.3e-16  Score=134.10  Aligned_cols=192  Identities=14%  Similarity=0.096  Sum_probs=127.2

Q ss_pred             ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCc-----eEEEEEccCCCEEEEEecC---------
Q psy10348         58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE-----VLSADFDLLGTKIMSCGMD---------  123 (291)
Q Consensus        58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~d---------  123 (291)
                      ....+.|+| ++.+++++  |+.|++||+.+++....+   .+|...     ...+.|||||++|+.++.+         
T Consensus        18 ~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~   91 (740)
T 4a5s_A           18 KLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFL---ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT   91 (740)
T ss_dssp             CCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEE---CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred             cccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEE---echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence            456899999 88888886  899999999999887766   455432     3457899999999998876         


Q ss_pred             CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348        124 HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       124 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~  201 (291)
                      +.+.+||+.+++....                             ..|...+...+|+  |+.|+.+ .|+.|.+|++.+
T Consensus        92 ~~~~~~d~~~~~~~~l-----------------------------~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~  141 (740)
T 4a5s_A           92 ASYDIYDLNKRQLITE-----------------------------ERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN  141 (740)
T ss_dssp             EEEEEEETTTTEECCS-----------------------------SCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred             eEEEEEECCCCcEEEc-----------------------------ccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCC
Confidence            5667999998874321                             1256678899998  7788777 478999999987


Q ss_pred             CCccccccCCCceeeeeeecCCcccE-------EEEEEEecCCCcEEEEEcCCC--------------------------
Q psy10348        202 LEDKELRTNETNVTIINRLNFKDCEI-------WFIRFSMDYWQKILAVGNQSG--------------------------  248 (291)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~~~~~~~l~~~~~dg--------------------------  248 (291)
                      +....+........   .+.++...+       ....+.++|||++||.++.|.                          
T Consensus       142 ~~~~~lt~~g~~~~---~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y  218 (740)
T 4a5s_A          142 LPSYRITWTGKEDI---IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY  218 (740)
T ss_dssp             SCCEECCSCCBTTT---EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred             CceEEEcCCCCccc---eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence            75432211110000   001100000       001256778899999875332                          


Q ss_pred             ----------cEEEEEcCC---CCCCcceeEEEecc----ccccceeeeEEccCCceee
Q psy10348        249 ----------RTYVWDLDV---QDPSSIKFQILSHP----RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       249 ----------~i~vwd~~~---~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~  290 (291)
                                .|++||+.+   ++...  ...+..+    ++...+..++|||||+.++
T Consensus       219 p~~G~~~~~~~l~v~d~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~wspdg~~~~  275 (740)
T 4a5s_A          219 PKAGAVNPTVKFFVVNTDSLSSVTNAT--SIQITAPASMLIGDHYLCDVTWATQERISL  275 (740)
T ss_dssp             CBTTSCCCEEEEEEEETTSCCSSSCCC--EEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred             CCCcCcCCeeEEEEEECCCCCCCCcce--EEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence                      477888887   63211  1122211    3667899999999999654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.68  E-value=5.4e-14  Score=110.14  Aligned_cols=221  Identities=10%  Similarity=-0.056  Sum_probs=143.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      ....+.+..+     +++++...++.|.+||..+++.+..+. .......+++++ ++.++++...++.|.+||..+++.
T Consensus        45 ~~~~i~~~~~-----~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~  117 (328)
T 3dsm_A           45 VAQSMVIRDG-----IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEI  117 (328)
T ss_dssp             CEEEEEEETT-----EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEE
T ss_pred             cceEEEEECC-----EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeE
Confidence            3456666432     467777778999999999999988885 346678999988 776555554789999999999887


Q ss_pred             eeeecccc--CCCCceEEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         92 IAIFGGVE--GHRDEVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        92 ~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ...+..-.  +.......+++  ++..++.+.  .++.|.++|+.+++....+..                         
T Consensus       118 ~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-------------------------  170 (328)
T 3dsm_A          118 TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-------------------------  170 (328)
T ss_dssp             EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-------------------------
T ss_pred             EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-------------------------
Confidence            76653100  01114556777  345555554  488999999998876654431                         


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCC----------CeEEEecCCCCCccccccCCCceeeeeeecCCc-ccEEEEEEEe
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCE----------NCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEIWFIRFSM  234 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~  234 (291)
                          ......+.++  |++++++..+          +.|.++|..+.+.            ...+.... ....  .+++
T Consensus       171 ----g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v------------~~~~~~~~g~~p~--~la~  232 (328)
T 3dsm_A          171 ----GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV------------EKQFKFKLGDWPS--EVQL  232 (328)
T ss_dssp             ----SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE------------EEEEECCTTCCCE--EEEE
T ss_pred             ----CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE------------EEEEecCCCCCce--eEEE
Confidence                1112355665  5555555544          7899999887643            33433221 1223  4566


Q ss_pred             cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC-Cceee
Q psy10348        235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN-GNVLL  290 (291)
Q Consensus       235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~  290 (291)
                      +|++++|+++..  .|.+||..+++.....  .+.  ........++++|+ +.+.+
T Consensus       233 ~~d~~~lyv~~~--~v~~~d~~t~~~~~~~--~~~--~~~~~p~gi~vdp~~g~lyv  283 (328)
T 3dsm_A          233 NGTRDTLYWINN--DIWRMPVEADRVPVRP--FLE--FRDTKYYGLTVNPNNGEVYV  283 (328)
T ss_dssp             CTTSCEEEEESS--SEEEEETTCSSCCSSC--SBC--CCSSCEEEEEECTTTCCEEE
T ss_pred             ecCCCEEEEEcc--EEEEEECCCCceeeee--eec--CCCCceEEEEEcCCCCeEEE
Confidence            677999988765  8999999887642111  111  11356788999994 44443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.66  E-value=1.9e-14  Score=112.98  Aligned_cols=228  Identities=11%  Similarity=0.000  Sum_probs=149.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ...+.+++|+++..    .++..+.++.++.|   .++....+..+...+.+++|++ ++++++++..++.|.+||..++
T Consensus         5 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~   76 (333)
T 2dg1_A            5 QQDLPTLFYSGKSN----SAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETK   76 (333)
T ss_dssp             -CCCCBCCSCGGGG----CSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTC
T ss_pred             ccccceeeecCCcc----ceeEEeecccCccc---ccceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCC
Confidence            45578889999874    66666778899999   3556666776777789999999 8888888888999999999887


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.....   ..+...+.+++++++|+++++...+    +.|.+||..++.....+..                       
T Consensus        77 ~~~~~~---~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~-----------------------  130 (333)
T 2dg1_A           77 EIKRPF---VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED-----------------------  130 (333)
T ss_dssp             CEEEEE---ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-----------------------
T ss_pred             cEEEEe---eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-----------------------
Confidence            765543   2456789999999999888777666    6899999887653211100                       


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecC------CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSC------ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                         ..+...+..+.++  ++++++...      .+.|..+|....+.             ..+........  .++++|+
T Consensus       131 ---~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~--~i~~~~d  192 (333)
T 2dg1_A          131 ---LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-------------TPIIQNISVAN--GIALSTD  192 (333)
T ss_dssp             ---SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-------------EEEEEEESSEE--EEEECTT
T ss_pred             ---CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-------------EEeecCCCccc--ceEECCC
Confidence               0123457788887  555555443      35677777654332             11111111222  3556788


Q ss_pred             CcEEEE-EcCCCcEEEEEcCC-CCCCccee-E-EEeccccccceeeeEEccCCceee
Q psy10348        238 QKILAV-GNQSGRTYVWDLDV-QDPSSIKF-Q-ILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       238 ~~~l~~-~~~dg~i~vwd~~~-~~~~~~~~-~-~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++|++ .+.++.|.+|++.+ +....... . .....++ ..+..++++++|++++
T Consensus       193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v  248 (333)
T 2dg1_A          193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYV  248 (333)
T ss_dssp             SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEE
T ss_pred             CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEE
Confidence            986654 45678999999964 32211110 1 1111122 4678899999998765

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.64  E-value=7.5e-14  Score=109.35  Aligned_cols=208  Identities=13%  Similarity=0.089  Sum_probs=137.7

Q ss_pred             CCCeEEEEccCCcceeEEEe------eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348         34 SRAVIRIFSPAFHACVRHFY------GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS  107 (291)
Q Consensus        34 ~dg~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~  107 (291)
                      .++.|.++|.++++....+.      ........+.+.  ++.++++...++.|.+||..+++.+..+   . .......
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i---~-~~~~p~~   88 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI---T-GFTSPRY   88 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE---E-CCSSEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc---C-CCCCCcE
Confidence            37999999999988765441      112345677775  4567777777899999999999988887   2 3467889


Q ss_pred             EEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEE
Q psy10348        108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLS  187 (291)
Q Consensus       108 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  187 (291)
                      ++++++++.+++...++.|.+||+.+++....+.....                       .+.......+++.++.++.
T Consensus        89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-----------------------~~~~~~p~~i~~~~~~lyv  145 (328)
T 3dsm_A           89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-----------------------DMESGSTEQMVQYGKYVYV  145 (328)
T ss_dssp             EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-----------------------CTTTCBCCCEEEETTEEEE
T ss_pred             EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-----------------------cccCCCcceEEEECCEEEE
Confidence            99999985444443799999999998876544331000                       0011133455556555555


Q ss_pred             ec--CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----------CcEEEEEc
Q psy10348        188 KS--CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----------GRTYVWDL  255 (291)
Q Consensus       188 ~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----------g~i~vwd~  255 (291)
                      +.  .++.|.++|+.+.+.            +..+.....+   ..+.++|+|++++++..+          +.|.++|.
T Consensus       146 ~~~~~~~~v~viD~~t~~~------------~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~  210 (328)
T 3dsm_A          146 NCWSYQNRILKIDTETDKV------------VDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA  210 (328)
T ss_dssp             EECTTCCEEEEEETTTTEE------------EEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred             EcCCCCCEEEEEECCCCeE------------EEEEEcCCCc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence            54  489999999988743            3333322221   134556889877777654          78999999


Q ss_pred             CCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        256 DVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+++    ....+... ....+..++|+||+++|.
T Consensus       211 ~t~~----v~~~~~~~-~g~~p~~la~~~d~~~ly  240 (328)
T 3dsm_A          211 ETFT----VEKQFKFK-LGDWPSEVQLNGTRDTLY  240 (328)
T ss_dssp             TTTE----EEEEEECC-TTCCCEEEEECTTSCEEE
T ss_pred             CCCe----EEEEEecC-CCCCceeEEEecCCCEEE
Confidence            8874    22233321 123688999999998774

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.64  E-value=2.7e-13  Score=117.72  Aligned_cols=225  Identities=11%  Similarity=-0.034  Sum_probs=139.2

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCC-----CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCe------
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSR-----AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT------   80 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~------   80 (291)
                      .+..++||||++    +||.+..+     ..|++||+++++.+.. ..+...+..++|+| + +.|+.++.++.      
T Consensus       164 ~~~~~~~SPDG~----~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~  236 (741)
T 1yr2_A          164 ALDAWAASDDGR----LLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAF  236 (741)
T ss_dssp             EEEEEEECTTSS----EEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC------
T ss_pred             EEEeEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEEC-C-CEEEEEEecCccccccc
Confidence            678899999984    77776543     4699999999987653 22233346889999 7 77777766543      


Q ss_pred             --------EEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEecCC-----cEEEEeccCc--hhhhhhccc
Q psy10348         81 --------LRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-----SLKLWDLTKP--EIKDACAES  143 (291)
Q Consensus        81 --------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~--~~~~~~~~~  143 (291)
                              |++|++.++..  ...+. ...+...+..+.|+|+|++|+..+.++     .|++||+.++  +....+.  
T Consensus       237 ~~~~~~~~v~~~~lgt~~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--  313 (741)
T 1yr2_A          237 QALNYNQTVWLHRLGTPQSADQPVFA-TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--  313 (741)
T ss_dssp             --CCCCCEEEEEETTSCGGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--
T ss_pred             ccCCCCCEEEEEECCCCchhCEEEec-cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--
Confidence                    89999977652  22221 123444688999999999988877654     7999999876  2011111  


Q ss_pred             cccCCCCccccccCccccCcccccccccCcceeEEEE-cCCEEEEecC----CCeEEEecCCCCCccccccCCCceeeee
Q psy10348        144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW-LGDFVLSKSC----ENCIICWKPGRLEDKELRTNETNVTIIN  218 (291)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~  218 (291)
                                                .+...+....+ +++.|+..+.    ++.|.+||+.+.. .         ....
T Consensus       314 --------------------------~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~---------~~~~  357 (741)
T 1yr2_A          314 --------------------------PDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-P---------RFDT  357 (741)
T ss_dssp             --------------------------CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-C---------EEEE
T ss_pred             --------------------------CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-c---------ccEE
Confidence                                      01111222222 3776666554    4569999987642 0         1112


Q ss_pred             eecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC-CCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        219 RLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD-VQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+..+...+..  ++++ ++.++++...|+..+||.+. +++    ....+.. ...+.+..++++|+++.|+
T Consensus       358 l~~~~~~~l~~--~~~~-~~~lv~~~~~dg~~~l~~~~~~g~----~~~~l~~-~~~~~v~~~~~s~d~~~l~  422 (741)
T 1yr2_A          358 VVPESKDNLES--VGIA-GNRLFASYIHDAKSQVLAFDLDGK----PAGAVSL-PGIGSASGLSGRPGDRHAY  422 (741)
T ss_dssp             EECCCSSEEEE--EEEE-BTEEEEEEEETTEEEEEEEETTSC----EEEECBC-SSSCEEEEEECCBTCSCEE
T ss_pred             EecCCCCeEEE--EEEE-CCEEEEEEEECCEEEEEEEeCCCC----ceeeccC-CCCeEEEEeecCCCCCEEE
Confidence            22223333333  3443 36788888899988877665 232    1222322 2346788999999988664

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.64  E-value=2.3e-13  Score=106.63  Aligned_cols=202  Identities=7%  Similarity=-0.045  Sum_probs=139.1

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEe---------eeccceeEEEEecCCCcEEEEee-cCCe
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFY---------GHGHAINELKFHPQDFNLLLSVS-KDHT   80 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~l~s~~-~dg~   80 (291)
                      ....++++|++    .++++...++.|++|+.+... .+..+.         .+-.....++++|.++.++++.+ .++.
T Consensus        92 ~p~gia~d~~g----~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~  167 (329)
T 3fvz_A           92 LPHGLSIDTDG----NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR  167 (329)
T ss_dssp             SEEEEEECTTS----CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred             CceEEEECCCC----CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence            56788999888    488888889999999986442 555552         33346889999985677777775 6899


Q ss_pred             EEEEECCCcceeeeeccc-------cCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348         81 LRLWNIKTDICIAIFGGV-------EGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST  152 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~  152 (291)
                      |++|| .+++.+..+...       .++-.....++++|+ +.++++...++.|++||..+++.+..+..          
T Consensus       168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~----------  236 (329)
T 3fvz_A          168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH----------  236 (329)
T ss_dssp             EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC----------
T ss_pred             EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec----------
Confidence            99999 557777666210       012234889999998 66667777789999999987776554321          


Q ss_pred             ccccCccccCcccccccccCcceeEEEEc--------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec---
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRNYVDCVRWL--------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN---  221 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---  221 (291)
                                      ..+...+..++|.        ++..++...+..|.+||..+++.            +..+.   
T Consensus       237 ----------------~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~------------~~~~~~~~  288 (329)
T 3fvz_A          237 ----------------ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI------------IDVFKPVR  288 (329)
T ss_dssp             ----------------TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE------------EEEECCSS
T ss_pred             ----------------cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE------------EEEEcCCC
Confidence                            0123334455554        33334444566899999887754            44442   


Q ss_pred             CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      .+......  ++++|+|.++++...++.|++|++...
T Consensus       289 ~~~~~p~~--ia~~~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          289 KHFDMPHD--IVASEDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             SCCSSEEE--EEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred             CccCCeeE--EEECCCCCEEEEECCCCEEEEEeCCcc
Confidence            33333444  455678988888889999999998753

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.63  E-value=8.2e-13  Score=110.24  Aligned_cols=196  Identities=10%  Similarity=0.054  Sum_probs=138.0

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC--CcceeeeeccccCCCCc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK--TDICIAIFGGVEGHRDE  104 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~  104 (291)
                      .++++...++.|.++|..+++.+..+.. ...+..+.|+| +++++++++.|+.|.+||+.  +++.+..+   .. ...
T Consensus       168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i---~~-G~~  241 (567)
T 1qks_A          168 LFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEI---KI-GSE  241 (567)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEE---EC-CSE
T ss_pred             eEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEE---ec-CCC
Confidence            4777778899999999999999988874 34567899999 99999999999999999995  77777766   22 345


Q ss_pred             eEEEEEc----cCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc-ceeEE
Q psy10348        105 VLSADFD----LLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN-YVDCV  178 (291)
Q Consensus       105 i~~~~~~----~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~  178 (291)
                      ...++|+    |+|++++++.. ++.+.++|..+.+.+..+...-.                  .......|.. .+..+
T Consensus       242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~------------------~~~~~~~~p~~rva~i  303 (567)
T 1qks_A          242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM------------------TYDEQEYHPEPRVAAI  303 (567)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEE------------------CTTTCCEESCCCEEEE
T ss_pred             CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccc------------------ccccccccCCCceEEE
Confidence            6899999    69998887766 69999999988887665431000                  0000001222 45566


Q ss_pred             EEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEE
Q psy10348        179 RWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWD  254 (291)
Q Consensus       179 ~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd  254 (291)
                      ..+   ..+++....+|.|.++|.......          .+..+.... .  .-.+.++|++++++++. .+++|.++|
T Consensus       304 ~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~----------~v~~i~~~~-~--~~d~~~~pdgr~~~va~~~sn~V~ViD  370 (567)
T 1qks_A          304 LASHYRPEFIVNVKETGKILLVDYTDLNNL----------KTTEISAER-F--LHDGGLDGSHRYFITAANARNKLVVID  370 (567)
T ss_dssp             EECSSSSEEEEEETTTTEEEEEETTCSSEE----------EEEEEECCS-S--EEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred             EEcCCCCEEEEEecCCCeEEEEecCCCccc----------eeeeeeccc-c--ccCceECCCCCEEEEEeCCCCeEEEEE
Confidence            655   336666677899999998765421          122222111 1  12356778899987765 678999999


Q ss_pred             cCCCC
Q psy10348        255 LDVQD  259 (291)
Q Consensus       255 ~~~~~  259 (291)
                      +.+++
T Consensus       371 ~~t~k  375 (567)
T 1qks_A          371 TKEGK  375 (567)
T ss_dssp             TTTTE
T ss_pred             CCCCc
Confidence            99885

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.62  E-value=2.4e-14  Score=112.99  Aligned_cols=175  Identities=13%  Similarity=0.036  Sum_probs=124.9

Q ss_pred             ceeEEEEecCCCcEEEEeecCCeEEEEECCCcc---------eee-eeccccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI---------CIA-IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---------~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      ++..+++++ ...++++|+.++ +.+|+++..+         ... ..   ..+.. |+.++|  ++.+|+++ .++.|+
T Consensus        39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~---~~lp~-V~~l~f--d~~~L~v~-~~~~l~  109 (388)
T 1xip_A           39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE---KEIPD-VIFVCF--HGDQVLVS-TRNALY  109 (388)
T ss_dssp             CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE---EECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred             cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE---eeCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence            689999999 888999999875 6669876443         111 11   23556 999999  88999998 889999


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcccc
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKEL  207 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  207 (291)
                      +||+++.......                            ..|...+..+.+....+++++.||.|.+||+......  
T Consensus       110 v~dv~sl~~~~~~----------------------------~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~--  159 (388)
T 1xip_A          110 SLDLEELSEFRTV----------------------------TSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTK--  159 (388)
T ss_dssp             EEESSSTTCEEEE----------------------------EECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE--
T ss_pred             EEEchhhhccCcc----------------------------ceeecceeeEEecCCCEEEEECCCCEEEEEccCCccc--
Confidence            9999876532221                            1255567777777545888899999999999876431  


Q ss_pred             ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEE-------eccccccceeee
Q psy10348        208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQIL-------SHPRCMSAVRQT  280 (291)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~v~~~  280 (291)
                                .    ....+.  +++|+|+|  ++.|..||++++|+....+..  ....+       .+.+|...|.++
T Consensus       160 ----------~----~~~~Vs--~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~--~k~~I~~Pp~~~~~~~~~~~V~sI  219 (388)
T 1xip_A          160 ----------Q----LAQNVT--SFDVTNSQ--LAVLLKDRSFQSFAWRNGEME--KQFEFSLPSELEELPVEEYSPLSV  219 (388)
T ss_dssp             ----------E----EEESEE--EEEECSSE--EEEEETTSCEEEEEEETTEEE--EEEEECCCHHHHTSCTTTSEEEEE
T ss_pred             ----------c----ccCCce--EEEEcCCc--eEEEEcCCcEEEEcCCCcccc--ccceecCCcccccccCCCeeEEEE
Confidence                      1    122344  56666778  788999999999988776310  02233       112467899999


Q ss_pred             EEccCCceeeC
Q psy10348        281 TLSKNGNVLLC  291 (291)
Q Consensus       281 ~~s~~g~~l~s  291 (291)
                      .|.+++++|++
T Consensus       220 ~wl~~~~flv~  230 (388)
T 1xip_A          220 TILSPQDFLAV  230 (388)
T ss_dssp             EESSSSEEEEE
T ss_pred             EEecCCeEEEE
Confidence            99999999874

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.62  E-value=3e-12  Score=98.67  Aligned_cols=224  Identities=7%  Similarity=-0.069  Sum_probs=149.3

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE-eeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ...+.++++.+++    .++++...++.|.+||.. ++..... ..+...+..+++.+ ++.++++...++.|..||.. 
T Consensus        14 ~~~~~~i~~d~~g----~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-   86 (299)
T 2z2n_A           14 DTGPYGITVSDKG----KVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-   86 (299)
T ss_dssp             SCCEEEEEECTTS----CEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred             CCCccceEECCCC----CEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-
Confidence            4678999999988    477766667899999988 5543222 22346789999999 88888877778899999986 


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++. ..+. +......+..+++.+++.++++...++.|..||. +++......                           
T Consensus        87 g~~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~---------------------------  136 (299)
T 2z2n_A           87 GII-KEYT-LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL---------------------------  136 (299)
T ss_dssp             SCE-EEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC---------------------------
T ss_pred             CcE-EEEe-CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC---------------------------
Confidence            433 2221 1234567899999999988887777889999998 443221000                           


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      ......+..++++  +++.++...++.|..||. +++..           ..........+.  .++.++++.+.++...
T Consensus       137 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~~--~i~~~~~g~l~v~~~~  202 (299)
T 2z2n_A          137 PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT-----------EFKIPTPASGPV--GITKGNDDALWFVEII  202 (299)
T ss_dssp             SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCEE--EEEECTTSSEEEEETT
T ss_pred             CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE-----------EeeCCCCCCcce--eEEECCCCCEEEEccC
Confidence            0123346788887  556666666789999998 44321           111111222233  4566777887777777


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++.|.+||. +++.     ..+........+.+++++++|+..+
T Consensus       203 ~~~i~~~~~-~g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v  240 (299)
T 2z2n_A          203 GNKIGRITT-SGEI-----TEFKIPTPNARPHAITAGAGIDLWF  240 (299)
T ss_dssp             TTEEEEECT-TCCE-----EEEECSSTTCCEEEEEECSTTCEEE
T ss_pred             CceEEEECC-CCcE-----EEEECCCCCCCceeEEECCCCCEEE
Confidence            889999998 5531     2222233446788999999998665

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.60  E-value=2.3e-13  Score=107.45  Aligned_cols=207  Identities=12%  Similarity=0.084  Sum_probs=127.1

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEec---------CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAG---------SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-   78 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~---------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-   78 (291)
                      .-..+...++  ++    +.++...         .++.|.+||+.+++.. .+    ..+..++|+| +++.|+.++.+ 
T Consensus        13 ~~~~~~~~~~--dG----~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~Sp-Dg~~la~~~~~~   80 (347)
T 2gop_A           13 KFAYLSDPRT--KG----ELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISP-DGKKIAFMRANE   80 (347)
T ss_dssp             CSCEEEEEEE--ET----TEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECT-TSSEEEEEEEET
T ss_pred             eeEEcccceE--CC----cEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECC-CCCEEEEEEecc
Confidence            3456677777  66    4666542         2678999999887653 33    5678899999 88888877654 


Q ss_pred             --C--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC---------------------------CcEE
Q psy10348         79 --H--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD---------------------------HSLK  127 (291)
Q Consensus        79 --g--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------~~i~  127 (291)
                        +  .|.+||+.+++.....    .+.. +..+.|+|+|+.|+.++.+                           ..|.
T Consensus        81 ~~~~~~l~~~~~~~g~~~~l~----~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~  155 (347)
T 2gop_A           81 EKKVSEIWVADLETLSSKKIL----EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW  155 (347)
T ss_dssp             TTTEEEEEEEETTTTEEEEEE----EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred             CCCcceEEEEECCCCceEEEE----cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence              3  3788888877765544    2233 9999999999988887643                           4688


Q ss_pred             EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCC-EEEEecCCC-------eEEEecC
Q psy10348        128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD-FVLSKSCEN-------CIICWKP  199 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~-------~i~iwd~  199 (291)
                      +||+.+++.+..+.                            . . .+..+.|+++ +++++..+.       ...+|.+
T Consensus       156 ~~d~~~~~~~~~l~----------------------------~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~  205 (347)
T 2gop_A          156 IFDTESEEVIEEFE----------------------------K-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIW  205 (347)
T ss_dssp             EEETTTTEEEEEEE----------------------------E-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEE
T ss_pred             EEECCCCeEEeeec----------------------------C-C-CcccccCCCCeEEEEEecccccccccccccEEEe
Confidence            88887765422211                            1 1 4567778722 666664432       3344433


Q ss_pred             CCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC--------CcEEEEEcCCCCCCcceeEEEecc
Q psy10348        200 GRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS--------GRTYVWDLDVQDPSSIKFQILSHP  271 (291)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~~~~~  271 (291)
                      .+++             ...+..+ ..+.  .+  +|+|++|+.++.+        ..|.+||  +++    . ..+ ..
T Consensus       206 d~~~-------------~~~l~~~-~~~~--~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~----~-~~l-~~  259 (347)
T 2gop_A          206 EDGK-------------EEKMFEK-VSFY--AV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE----V-MGI-LD  259 (347)
T ss_dssp             ETTE-------------EEEEEEE-ESEE--EE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC----E-EES-ST
T ss_pred             CCCc-------------eEEeccC-ccee--eE--CCCCCEEEEEEccccCCccccceEEEEC--CCc----e-Eec-cc
Confidence            3321             1222212 2222  22  6779988877744        3677787  332    1 111 22


Q ss_pred             ccccceee-eEEccCCceee
Q psy10348        272 RCMSAVRQ-TTLSKNGNVLL  290 (291)
Q Consensus       272 ~~~~~v~~-~~~s~~g~~l~  290 (291)
                      .+...+.. +.|+ || +++
T Consensus       260 ~~~~~~~~~~~~s-dg-~~~  277 (347)
T 2gop_A          260 EVDRGVGQAKIKD-GK-VYF  277 (347)
T ss_dssp             TCCSEEEEEEEET-TE-EEE
T ss_pred             cCCcccCCccEEc-Cc-EEE
Confidence            44567776 8999 87 554

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.57  E-value=4e-12  Score=98.83  Aligned_cols=227  Identities=9%  Similarity=0.009  Sum_probs=140.8

Q ss_pred             ceeEEEEeeeccCCCCCEEEE-------ecCCCeEEEEccCCcceeEEEe----eeccceeEEEEecCC-CcEEEEeecC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAV-------AGSRAVIRIFSPAFHACVRHFY----GHGHAINELKFHPQD-FNLLLSVSKD   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~-------~~~dg~i~vw~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~~l~s~~~d   78 (291)
                      ....+++|++++    .++++       +..++.|.+||..+++......    ++...+..+++++ + +.++++.. .
T Consensus        18 ~~~~~~~~~~~g----~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~~-~   91 (314)
T 1pjx_A           18 PGAEGPVFDKNG----DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVADM-R   91 (314)
T ss_dssp             TTCEEEEECTTS----CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEET-T
T ss_pred             CCccCceECCCC----CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEEC-C
Confidence            455789999877    47777       5778999999988777543221    1556789999999 6 66665544 4


Q ss_pred             CeEEEEECCCcceeee-ecccc-CCCCceEEEEEccCCCEEEEEecC---------------CcEEEEeccCchhhhhhc
Q psy10348         79 HTLRLWNIKTDICIAI-FGGVE-GHRDEVLSADFDLLGTKIMSCGMD---------------HSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d---------------~~i~v~d~~~~~~~~~~~  141 (291)
                      +.|.+||.. ++.... ..... .....+.+++++++|+++++...+               +.|..||.. ++..... 
T Consensus        92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-  168 (314)
T 1pjx_A           92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-  168 (314)
T ss_dssp             TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-
T ss_pred             CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-
Confidence            479999988 665433 21101 122458899999999877776655               456666654 3221110 


Q ss_pred             cccccCCCCccccccCccccCcccccccccCcceeEEEEc----CC--EE-EEecCCCeEEEecCC-CCCccccccCCCc
Q psy10348        142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL----GD--FV-LSKSCENCIICWKPG-RLEDKELRTNETN  213 (291)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~--~l-~~~~~d~~i~iwd~~-~~~~~~~~~~~~~  213 (291)
                                                  .+......++++    .+  .+ ++...++.|.+||.. .+...       .
T Consensus       169 ----------------------------~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~-------~  213 (314)
T 1pjx_A          169 ----------------------------TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE-------N  213 (314)
T ss_dssp             ----------------------------EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE-------E
T ss_pred             ----------------------------cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccc-------c
Confidence                                        012234566665    32  44 444568899999975 22110       0


Q ss_pred             eeeeeeecCCc-ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        214 VTIINRLNFKD-CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       214 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      ......+..+. ....  .++++++|+++++...++.|.+||..+++..    ..+.  .+...+.+++|+|+|++|
T Consensus       214 ~~~~~~~~~~~~~~p~--~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~----~~~~--~~~~~~~~i~~~~dg~~l  282 (314)
T 1pjx_A          214 KKVWGHIPGTHEGGAD--GMDFDEDNNLLVANWGSSHIEVFGPDGGQPK----MRIR--CPFEKPSNLHFKPQTKTI  282 (314)
T ss_dssp             EEEEEECCCCSSCEEE--EEEEBTTCCEEEEEETTTEEEEECTTCBSCS----EEEE--CSSSCEEEEEECTTSSEE
T ss_pred             ceEEEECCCCCCCCCC--ceEECCCCCEEEEEcCCCEEEEEcCCCCcEe----EEEe--CCCCCceeEEECCCCCEE
Confidence            01122232222 2233  3566788988888878889999998866432    2232  223578999999999844

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.57  E-value=2.7e-12  Score=103.34  Aligned_cols=245  Identities=8%  Similarity=0.012  Sum_probs=146.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEECCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWNIKT   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~   88 (291)
                      .....++|++++    .++++...++.|++||.++++....... ..... ++|++ +++.|+++..++  .|.+++...
T Consensus       131 ~~P~~la~d~~g----~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~  203 (409)
T 3hrp_A          131 KYMWGIAAVGNN----TVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKAS  203 (409)
T ss_dssp             CCEEEEEECSTT----EEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGG
T ss_pred             CCceEEEEeCCC----CEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCC
Confidence            356788999887    4777777789999999987776555443 23334 99999 888888887765  789998876


Q ss_pred             cceeeeeccccC-CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         89 DICIAIFGGVEG-HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        89 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +.....+..+.. ....+.+++++|++..|+.+..++.|+.||..++... .+.. .....                   
T Consensus       204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~-~~~~g-------------------  262 (409)
T 3hrp_A          204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQ-LELSG-------------------  262 (409)
T ss_dssp             TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEE-CCCCS-------------------
T ss_pred             CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEec-ccccC-------------------
Confidence            554333311122 4566788999996556666777889999998866421 1100 00000                   


Q ss_pred             ccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCC-Cceeeeee-ecCCcccEEEEEEEecCCCcEEE
Q psy10348        168 RDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNE-TNVTIINR-LNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       168 ~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                       .....+...++|+   +.++++...++.|+.|+....... +.... .....-.. ....-..  ...++++|+|++++
T Consensus       263 -~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~-~~g~~~~~g~~dg~~~~~~~~~--P~gia~d~dG~lyv  338 (409)
T 3hrp_A          263 -SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEW-FCGSATQKTVQDGLREEALFAQ--PNGMTVDEDGNFYI  338 (409)
T ss_dssp             -CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE-EEECTTCCSCBCEEGGGCBCSS--EEEEEECTTCCEEE
T ss_pred             -CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEE-EEeCCCCCCcCCCcccccEeCC--CeEEEEeCCCCEEE
Confidence             0001111278887   335566667889999987643110 00000 00000000 0000011  23456678899888


Q ss_pred             EEc-CCCcEEEEEcCCCCCCcceeEEEeccc------------cccceeeeEEccCCceeeC
Q psy10348        243 VGN-QSGRTYVWDLDVQDPSSIKFQILSHPR------------CMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       243 ~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~g~~l~s  291 (291)
                      +-+ .++.|+.|++.++.    .........            .-.....++++++|.++++
T Consensus       339 ad~~~~~~I~~~~~~~G~----v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa  396 (409)
T 3hrp_A          339 VDGFKGYCLRKLDILDGY----VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIA  396 (409)
T ss_dssp             EETTTTCEEEEEETTTTE----EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE
T ss_pred             EeCCCCCEEEEEECCCCE----EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEE
Confidence            887 89999999987663    212222100            1235789999999887764

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.57  E-value=1.3e-11  Score=95.12  Aligned_cols=222  Identities=4%  Similarity=-0.109  Sum_probs=147.2

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      ...+.++++.+++    .++++...++.|..|+.+ ++. ..+.  .....+..+++.+ ++.++++...++.|.+||. 
T Consensus        56 ~~~~~~i~~~~~g----~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-  127 (299)
T 2z2n_A           56 DAKVMCLTISSDG----EVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-  127 (299)
T ss_dssp             TCCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-
T ss_pred             cCceeeEEECCCC----CEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-
Confidence            4568889998887    477777778899999986 443 3332  2345688999999 8888887777889999998 


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      +++.....  .......+..++++++|..+++...++.|..||. +++.... .                          
T Consensus       128 ~g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~--------------------------  177 (299)
T 2z2n_A          128 DGKIREYE--LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF-K--------------------------  177 (299)
T ss_dssp             TCCEEEEE--CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-E--------------------------
T ss_pred             CCCEEEec--CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-e--------------------------
Confidence            55544322  1334567899999999987777767789999998 5543211 0                          


Q ss_pred             ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                      .......+..++++  +++.++...++.|.+||. ++...           ..........+.  .+..+++|+++++..
T Consensus       178 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~~--~i~~~~~g~l~v~~~  243 (299)
T 2z2n_A          178 IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-----------EFKIPTPNARPH--AITAGAGIDLWFTEW  243 (299)
T ss_dssp             CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCEE--EEEECSTTCEEEEET
T ss_pred             CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-----------EEECCCCCCCce--eEEECCCCCEEEecc
Confidence            00123346778887  566666666889999998 44321           111122223333  455667788777766


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .++.|..||.. ++     ...+....+...+.++++ ++|++.+
T Consensus       244 ~~~~i~~~d~~-g~-----~~~~~~~~~~~~~~~i~~-~~g~l~v  281 (299)
T 2z2n_A          244 GANKIGRLTSN-NI-----IEEYPIQIKSAEPHGICF-DGETIWF  281 (299)
T ss_dssp             TTTEEEEEETT-TE-----EEEEECSSSSCCEEEEEE-CSSCEEE
T ss_pred             CCceEEEECCC-Cc-----eEEEeCCCCCCccceEEe-cCCCEEE
Confidence            78899999983 31     123322334467899999 8888765

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.57  E-value=6.9e-12  Score=99.66  Aligned_cols=109  Identities=7%  Similarity=-0.100  Sum_probs=81.0

Q ss_pred             CEEEEecC--CC---eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcce
Q psy10348         27 PLLAVAGS--RA---VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDIC   91 (291)
Q Consensus        27 ~~l~~~~~--dg---~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~   91 (291)
                      +++++...  .+   .|.++|..+++.+..+..-..+  .++++| ++++++.+.          .++.|.+||..+.+.
T Consensus        33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~  109 (373)
T 2mad_H           33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP  109 (373)
T ss_pred             CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence            46666543  33   8899999999988887754444  999999 888888875          367899999998887


Q ss_pred             eeeeccc-cC---CCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhh
Q psy10348         92 IAIFGGV-EG---HRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDA  139 (291)
Q Consensus        92 ~~~~~~~-~~---~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~  139 (291)
                      +..+... ..   +......+.|+|+|++|+++..  ++.|.++| .+++.+..
T Consensus       110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~  162 (373)
T 2mad_H          110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ  162 (373)
T ss_pred             EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence            7765311 00   0133568999999999998874  57899999 98886654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.57  E-value=6e-13  Score=101.21  Aligned_cols=197  Identities=5%  Similarity=-0.143  Sum_probs=133.4

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ..+.++++.+++    .++++.. ++.|.+||...... ..+. .....+..+++.+ ++.++++...++.|.+|+..+.
T Consensus        67 ~~p~~i~~~~~g----~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~  139 (270)
T 1rwi_B           67 YQPQGLAVDGAG----TVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSK  139 (270)
T ss_dssp             CSCCCEEECTTC----CEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCC
T ss_pred             CCcceeEECCCC----CEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCc
Confidence            456788888877    4666655 88999999875543 3332 2235688999999 8888887777889999986554


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ......   ......+.+++++++|+++++...++.|.+||..........                            .
T Consensus       140 ~~~~~~---~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~----------------------------~  188 (270)
T 1rwi_B          140 TQTVLP---FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP----------------------------F  188 (270)
T ss_dssp             SCEECC---CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC----------------------------C
T ss_pred             eeEeec---cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec----------------------------c
Confidence            433222   233346788999999987777777889999998765422110                            0


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS  247 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d  247 (291)
                      .+...+..++++  |.++++...++.|.+||.......            .....+...+.  .++++++|+++++...+
T Consensus       189 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~------------~~~~~~~~~p~--~i~~~~~g~l~v~~~~~  254 (270)
T 1rwi_B          189 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST------------VLPFTGLNTPL--AVAVDSDRTVYVADRGN  254 (270)
T ss_dssp             SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE------------ECCCCSCSCEE--EEEECTTCCEEEEEGGG
T ss_pred             cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce------------eeccCCCCCce--eEEECCCCCEEEEECCC
Confidence            122456788887  556666667889999998654321            11111112233  45566779988888899


Q ss_pred             CcEEEEEcCCCC
Q psy10348        248 GRTYVWDLDVQD  259 (291)
Q Consensus       248 g~i~vwd~~~~~  259 (291)
                      +.|+++++...+
T Consensus       255 ~~v~~~~~~~~~  266 (270)
T 1rwi_B          255 DRVVKLTSLEHH  266 (270)
T ss_dssp             TEEEEECCCGGG
T ss_pred             CEEEEEcCCCcc
Confidence            999999998764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.56  E-value=2.5e-11  Score=93.70  Aligned_cols=229  Identities=10%  Similarity=0.044  Sum_probs=142.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      .--.+..|+++..   .++++...++.|..||..+++. ..+. ....+.++++++ +++++++ . ++.|.+||.++++
T Consensus        13 ~~~Egp~w~~~~~---~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~   84 (297)
T 3g4e_A           13 RCGESPVWEEVSN---SLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQS   84 (297)
T ss_dssp             SBEEEEEEETTTT---EEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTE
T ss_pred             ccccCCeEECCCC---EEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCc
Confidence            3445788998653   5777777889999999987765 3333 457799999999 8785554 3 5679999998776


Q ss_pred             eeeeecccc-CCCCceEEEEEccCCCEEEEEecC---------CcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         91 CIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGMD---------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        91 ~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      ......... .....+..++++|+|+++++...+         ..-.+|.+........+.                   
T Consensus        85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-------------------  145 (297)
T 3g4e_A           85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-------------------  145 (297)
T ss_dssp             EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-------------------
T ss_pred             EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-------------------
Confidence            543321101 123458899999999966654322         233455544221111110                   


Q ss_pred             cCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCC--CCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPG--RLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD  235 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  235 (291)
                               .+......++|+  ++.+ ++.+.++.|.+||+.  ++...       ..+.+..+........  .++.+
T Consensus       146 ---------~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~-------~~~~~~~~~~~~~~p~--g~~~d  207 (297)
T 3g4e_A          146 ---------DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS-------NRRSVYKLEKEEQIPD--GMCID  207 (297)
T ss_dssp             ---------EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE-------EEEEEEECCGGGCEEE--EEEEB
T ss_pred             ---------eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc-------CcEEEEECCCCCCCCC--eeEEC
Confidence                     122335678887  5544 556668899999873  33210       0011222222222333  35567


Q ss_pred             CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc-cCCceee
Q psy10348        236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS-KNGNVLL  290 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~  290 (291)
                      ++|++.++...++.|..||..+++.    ...+..  ....+++++|. ||++.|.
T Consensus       208 ~~G~lwva~~~~~~v~~~d~~tG~~----~~~i~~--p~~~~t~~~f~g~d~~~L~  257 (297)
T 3g4e_A          208 AEGKLWVACYNGGRVIRLDPVTGKR----LQTVKL--PVDKTTSCCFGGKNYSEMY  257 (297)
T ss_dssp             TTSCEEEEEETTTEEEEECTTTCCE----EEEEEC--SSSBEEEEEEESGGGCEEE
T ss_pred             CCCCEEEEEcCCCEEEEEcCCCceE----EEEEEC--CCCCceEEEEeCCCCCEEE
Confidence            8898887777788999999987742    233332  23578999998 8887664

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.55  E-value=3.6e-12  Score=98.33  Aligned_cols=197  Identities=12%  Similarity=0.000  Sum_probs=129.4

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee----ccceeEEEEecCCCcEEEE----ee----
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH----GHAINELKFHPQDFNLLLS----VS----   76 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s----~~----   76 (291)
                      +...+.++++++++    .++++...++.|.+||..+++........    ...+..++++| +++++++    |.    
T Consensus        67 ~~~~~~~l~~~~dg----~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~  141 (296)
T 3e5z_A           67 PSHHQNGHCLNKQG----HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPE  141 (296)
T ss_dssp             SCSSEEEEEECTTC----CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGG
T ss_pred             CCCCcceeeECCCC----cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCcccccccc
Confidence            44668899999988    47777777789999999888765443322    23467899999 8888887    33    


Q ss_pred             ---------cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc-Cchhhhhhcccccc
Q psy10348         77 ---------KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-KPEIKDACAESYTF  146 (291)
Q Consensus        77 ---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~  146 (291)
                               ..+.|..++.. ++. ..+   ..+......++|+|+++.+++.+.++.|.+||+. +++......   . 
T Consensus       142 ~~~~~~~~~~~~~l~~~~~~-g~~-~~~---~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~---~-  212 (296)
T 3e5z_A          142 EGYGGEMELPGRWVFRLAPD-GTL-SAP---IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV---H-  212 (296)
T ss_dssp             GSSCCCCCSSSCEEEEECTT-SCE-EEE---ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE---E-
T ss_pred             ccccccccCCCcEEEEECCC-CCE-EEe---ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe---E-
Confidence                     13456666655 443 333   3556677899999999988777778999999987 333200000   0 


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                                        +   ..+...+..++++  |++.++.  ++.|.+||.. ++            .+..+..+.
T Consensus       213 ------------------~---~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~------------~~~~~~~~~  256 (296)
T 3e5z_A          213 ------------------F---TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD------------ELGRVLTPQ  256 (296)
T ss_dssp             ------------------E---CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC------------EEEEEECSS
T ss_pred             ------------------e---eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC------------EEEEEECCC
Confidence                              0   0123345678887  5555444  8899999986 32            245555555


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      . +..+++. +|+++.|++++.++ +.-++..+.
T Consensus       257 ~-~~~~~f~-~~d~~~L~v~t~~~-l~~~~~~~~  287 (296)
T 3e5z_A          257 T-TSNLCFG-GPEGRTLYMTVSTE-FWSIETNVR  287 (296)
T ss_dssp             C-CCEEEEE-STTSCEEEEEETTE-EEEEECSCC
T ss_pred             C-ceeEEEE-CCCCCEEEEEcCCe-EEEEEcccc
Confidence            4 5555554 57789999988764 445555554

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.55  E-value=7.9e-12  Score=104.35  Aligned_cols=245  Identities=11%  Similarity=0.001  Sum_probs=150.9

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEe----cCCCcEEEEeec-CCeE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFH----PQDFNLLLSVSK-DHTL   81 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~s~~~-dg~i   81 (291)
                      ....+..+.|+|++    +++++++.|+.|.+||+.  +++.+..+.... ....++|+    | +++++++++. +++|
T Consensus       195 ~g~~p~~v~~SpDG----r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~p-DGk~l~v~n~~~~~v  268 (567)
T 1qks_A          195 TGYAVHISRLSASG----RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGW-EDKYAIAGAYWPPQY  268 (567)
T ss_dssp             CSSCEEEEEECTTS----CEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTC-TTTEEEEEEEETTEE
T ss_pred             CCCCccceEECCCC----CEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCC-CCCEEEEEEccCCeE
Confidence            34566789999998    599999999999999995  788888887533 45789999    7 7777776654 5899


Q ss_pred             EEEECCCcceeeeecccc----C---CC---------------------------------------------CceEEEE
Q psy10348         82 RLWNIKTDICIAIFGGVE----G---HR---------------------------------------------DEVLSAD  109 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~----~---~~---------------------------------------------~~i~~~~  109 (291)
                      .++|..+.+.+..+....    .   |.                                             .....+.
T Consensus       269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~  348 (567)
T 1qks_A          269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG  348 (567)
T ss_dssp             EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred             EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCce
Confidence            999998887776553110    0   00                                             1123456


Q ss_pred             EccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CC-EE
Q psy10348        110 FDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FV  185 (291)
Q Consensus       110 ~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l  185 (291)
                      |+|++++|+++. .++.|.++|+.+++....+... ..                      ..|...-..+ ++  +. ..
T Consensus       349 ~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg-g~----------------------~Phpg~g~~~-~~p~~g~v~  404 (567)
T 1qks_A          349 LDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG-GQ----------------------TPHPGRGANF-VHPTFGPVW  404 (567)
T ss_dssp             ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS-SS----------------------SBCCTTCEEE-EETTTEEEE
T ss_pred             ECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc-Cc----------------------CCCCccceee-ECCCCCcEE
Confidence            778888766655 4677888888777654433210 00                      0132211111 23  23 44


Q ss_pred             EEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-------CCcEEEEEcCC
Q psy10348        186 LSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-------SGRTYVWDLDV  257 (291)
Q Consensus       186 ~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~  257 (291)
                      +++. .++.|.++|.......     ....+.+.++......  .+.+..+|++++|.+...       .++|.|+|+.+
T Consensus       405 ~t~~~g~~~Vsvid~~~~~~~-----~~~~kvv~~i~~~g~g--~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~  477 (567)
T 1qks_A          405 ATSHMGDDSVALIGTDPEGHP-----DNAWKILDSFPALGGG--SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA  477 (567)
T ss_dssp             EEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECSCSC--CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred             EeCCCCCCeEEEecCCCCCCc-----cccCEEEEEEecCCCC--CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence            4443 4689999998863211     0001345665544322  122446788999998763       45999999998


Q ss_pred             CCC--CcceeEEEec------cccccceeeeEEccCCceee
Q psy10348        258 QDP--SSIKFQILSH------PRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       258 ~~~--~~~~~~~~~~------~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+.  .......+..      ..-...+..+.|+|+|+++.
T Consensus       478 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  518 (567)
T 1qks_A          478 MTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVW  518 (567)
T ss_dssp             CCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEE
T ss_pred             ccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEE
Confidence            721  0011122211      01134788999999998764

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.54  E-value=5.2e-13  Score=105.45  Aligned_cols=146  Identities=9%  Similarity=-0.044  Sum_probs=111.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---------e-eEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---------C-VRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .+++.+++++..    .++++|+.+ .+++|+++..+         . ......+.. |+.|+|   ++.+|+++ .++.
T Consensus        38 ~~~nlLais~~~----gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~  107 (388)
T 1xip_A           38 ASLQNLDISNSK----SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNA  107 (388)
T ss_dssp             SCCBCEEEETTT----TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSE
T ss_pred             ccccEEEEcCCC----CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCc
Confidence            468999999998    499999887 56669875443         1 112234666 999999   55788888 8899


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      |++||+.+.......   ..|..++.++.+.+.  .+++++.||.|.+||+.++....                      
T Consensus       108 l~v~dv~sl~~~~~~---~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----------------------  160 (388)
T 1xip_A          108 LYSLDLEELSEFRTV---TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----------------------  160 (388)
T ss_dssp             EEEEESSSTTCEEEE---EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----------------------
T ss_pred             EEEEEchhhhccCcc---ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----------------------
Confidence            999999876655544   466778888887755  38889999999999998776421                      


Q ss_pred             cCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCC
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                                +...|+|++|+.+-++.|..||++++|+....+
T Consensus       161 ----------~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~  193 (388)
T 1xip_A          161 ----------LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE  193 (388)
T ss_dssp             ----------EEESEEEEEECSSEEEEEETTSCEEEEEEETTE
T ss_pred             ----------ccCCceEEEEcCCceEEEEcCCcEEEEcCCCcc
Confidence                      445799999995558889999999999876654

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.53  E-value=1e-11  Score=94.62  Aligned_cols=184  Identities=9%  Similarity=0.013  Sum_probs=130.7

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeec-CCeEEEEECCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSK-DHTLRLWNIKT   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~   88 (291)
                      ..+.++.++|++    ++++  +.++.|..||. +++.+..+..+. ..+.++.+.+ +++++++.+. ++.|..+|. +
T Consensus        37 ~~~~~~~~~pdG----~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~  107 (276)
T 3no2_A           37 WECNSVAATKAG----EILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-K  107 (276)
T ss_dssp             CCCCEEEECTTS----CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-T
T ss_pred             CCCcCeEECCCC----CEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeC-C
Confidence            367888999988    4777  34778999999 799999988653 4788899999 8999998887 788888886 5


Q ss_pred             cceeeeeccc---cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         89 DICIAIFGGV---EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        89 ~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      |+.+..+..-   ..+......+...++|+++++...++.|..||.. ++.+.++..                       
T Consensus       108 Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~-----------------------  163 (276)
T 3no2_A          108 GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL-----------------------  163 (276)
T ss_dssp             SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC-----------------------
T ss_pred             CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC-----------------------
Confidence            7776665310   1222345566788999999999999999999988 887665542                       


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc----ccEEEEEEEecCCCc
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD----CEIWFIRFSMDYWQK  239 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~  239 (291)
                            .....++...  ++.++++..+++|..+|..+++.            +.++....    ...........++|.
T Consensus       164 ------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~------------~w~~~~~~~~~~~l~~~~~~~~~~~G~  225 (276)
T 3no2_A          164 ------SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI------------VRRVNANDIEGVQLFFVAQLFPLQNGG  225 (276)
T ss_dssp             ------SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE------------EEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred             ------CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE------------EEEecCCCCCCccccccccceEcCCCC
Confidence                  1122234443  77888888888999999987754            44443211    112233455567788


Q ss_pred             EEEEEc
Q psy10348        240 ILAVGN  245 (291)
Q Consensus       240 ~l~~~~  245 (291)
                      ++++.+
T Consensus       226 i~v~~~  231 (276)
T 3no2_A          226 LYICNW  231 (276)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            888874

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.52  E-value=1.1e-14  Score=115.73  Aligned_cols=181  Identities=12%  Similarity=-0.008  Sum_probs=103.9

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCC-ce
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD-EV  105 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~i  105 (291)
                      ..+++++.||.|+.||..+|+.+..+..  +.+.+..+.. ++..+++++.||.|+.||.++|+.+..+   ..+.. .+
T Consensus        10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~---~~~~~~~~   83 (369)
T 2hz6_A           10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKL---PFTIPELV   83 (369)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEEC---SCCHHHHH
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeee---eccCcccc
Confidence            5899999999999999999999988876  5566666666 6678888889999999999988877665   22211 11


Q ss_pred             EE-EEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCE
Q psy10348        106 LS-ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDF  184 (291)
Q Consensus       106 ~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  184 (291)
                      .+ ..+. .+..+++++.|+.++.||.++++.+..+...                            . .+. ..-.++.
T Consensus        84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~----------------------------~-~~~-~~p~~~~  132 (369)
T 2hz6_A           84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA----------------------------F-ADS-LSPSTSL  132 (369)
T ss_dssp             TTCSCC------CCCCEEEEEEEEECCC----------------------------------------------------
T ss_pred             ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC----------------------------C-ccc-ccccCCE
Confidence            00 0111 3457788888999999999999977654321                            0 000 0113678


Q ss_pred             EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC---cEEEEEcCCCcEEEEEcCCCCC
Q psy10348        185 VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ---KILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      +++++.|+.|..||.++++..            ..+....    ......+++.   ..+++++.||.|+.||..+++.
T Consensus       133 v~~~~~dg~v~a~d~~tG~~~------------W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~  195 (369)
T 2hz6_A          133 LYLGRTEYTITMYDTKTRELR------------WNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV  195 (369)
T ss_dssp             EEEEEEEEEEECCCSSSSSCC------------CEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred             EEEEecCCEEEEEECCCCCEE------------EeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence            888999999999999887642            2211110    0011222221   5677888999999999999863

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.52  E-value=4e-12  Score=100.11  Aligned_cols=249  Identities=8%  Similarity=-0.040  Sum_probs=151.6

Q ss_pred             EEeeeccCCCCCEEEEecC-----CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCe
Q psy10348         16 CAWSMDLESGRPLLAVAGS-----RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHT   80 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~   80 (291)
                      ....|++    ..+++...     ++.|.+.|..+++.+..+..-..+  .++++| +++++++++          .++.
T Consensus        38 ~~~~pd~----~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~sp-DG~~lyVan~~~~r~~~G~~~~~  110 (386)
T 3sjl_D           38 EAPAPDA----RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVAD-DGSFIAHASTVFSRIARGERTDY  110 (386)
T ss_dssp             CCCCCCT----TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEE
T ss_pred             eccCCCC----CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECC-CCCEEEEEcccccccccCCCCCE
Confidence            3445666    46666644     689999999999999999865555  499999 888877765          3678


Q ss_pred             EEEEECCCcceeeeeccccC----CCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccc-----------
Q psy10348         81 LRLWNIKTDICIAIFGGVEG----HRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAES-----------  143 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~-----------  143 (291)
                      |.+||..+++.+..+..-.+    .......+.++|+|++++++..  ++.|.++|+.+++.+.++...           
T Consensus       111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~  190 (386)
T 3sjl_D          111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPD  190 (386)
T ss_dssp             EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETT
T ss_pred             EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCc
Confidence            99999999998887631110    1224567899999999988864  689999999999988776421           


Q ss_pred             --cccCCCCccccccCcc-ccCccc--ccccccCcce-eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCcee
Q psy10348        144 --YTFNPARSTRPFDTQK-EHFPQF--STRDIHRNYV-DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVT  215 (291)
Q Consensus       144 --~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~v-~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  215 (291)
                        ....+++....+.... ......  .....-..++ ....|.  ...++..+.+|.|.+.|+......          
T Consensus       191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~----------  260 (386)
T 3sjl_D          191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAK----------  260 (386)
T ss_dssp             EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCE----------
T ss_pred             eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcce----------
Confidence              1223333333222211 111000  0000011112 123553  233333555899999998765431          


Q ss_pred             eeeeec---------C-CcccEEEEEEEecCCCcEEEEEcC----------CCcEEEEEcCCCCCCcceeEEEecccccc
Q psy10348        216 IINRLN---------F-KDCEIWFIRFSMDYWQKILAVGNQ----------SGRTYVWDLDVQDPSSIKFQILSHPRCMS  275 (291)
Q Consensus       216 ~~~~~~---------~-~~~~i~~~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~  275 (291)
                      .+..+.         + .......  +..+++++.+++...          .+.|.++|+.+++.+    ..+..   ..
T Consensus       261 v~~~~~~~~~~~~~~g~~p~g~q~--~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~----~~i~v---g~  331 (386)
T 3sjl_D          261 FLPAVEALTEAERADGWRPGGWQQ--VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL----AKFEM---GH  331 (386)
T ss_dssp             ECCCEESSCHHHHHTTEEECSSSC--EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEEE---EE
T ss_pred             eecceeccccccccccccCCCcce--eeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE----EEEEC---CC
Confidence            121111         0 0011112  334577888877643          257999999998643    22222   13


Q ss_pred             ceeeeEEccCCc-eee
Q psy10348        276 AVRQTTLSKNGN-VLL  290 (291)
Q Consensus       276 ~v~~~~~s~~g~-~l~  290 (291)
                      .+.+|++++|++ +|+
T Consensus       332 ~~~~lavs~D~~~~ly  347 (386)
T 3sjl_D          332 EIDSINVSQDEKPLLY  347 (386)
T ss_dssp             EECEEEECSSSSCEEE
T ss_pred             CcceEEECCCCCeEEE
Confidence            788999999997 543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.51  E-value=5.7e-12  Score=108.94  Aligned_cols=222  Identities=9%  Similarity=-0.049  Sum_probs=134.0

Q ss_pred             eccCCCCCEEEEecCC-----CeEEEEccCCcceeEEEe------eeccceeEEEEecCCCcEEEEeecCC-----eEEE
Q psy10348         20 MDLESGRPLLAVAGSR-----AVIRIFSPAFHACVRHFY------GHGHAINELKFHPQDFNLLLSVSKDH-----TLRL   83 (291)
Q Consensus        20 ~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg-----~i~v   83 (291)
                      |++    ++++....+     +.+.+.+...++....+.      +|...+..++|+| |+++||.+..++     .|++
T Consensus        81 ~dG----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v  155 (710)
T 2xdw_A           81 KKG----KRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKF  155 (710)
T ss_dssp             EET----TEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEE
T ss_pred             EEC----CEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEE
Confidence            666    355544322     245555554444332222      2334688999999 889888765543     8999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc----------------EEEEeccCchhhhhhccccccC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS----------------LKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~----------------i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      ||+.+++.....   .. ...+..++|+|||+.|+.++.++.                |++|++.+++....+.      
T Consensus       156 ~d~~tg~~~~~~---~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v------  225 (710)
T 2xdw_A          156 MKVDGAKELPDV---LE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC------  225 (710)
T ss_dssp             EETTTTEEEEEE---EE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE------
T ss_pred             EECCCCCCCccc---cc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE------
Confidence            999998876543   11 223677999999999999888766                9999998766321110      


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-----CCeEEEecCCC------CCccccccCCCce
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-----ENCIICWKPGR------LEDKELRTNETNV  214 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-----d~~i~iwd~~~------~~~~~~~~~~~~~  214 (291)
                                        .....|...+..+.|+  |++|+..+.     +..|.+||+.+      +..          
T Consensus       226 ------------------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~----------  277 (710)
T 2xdw_A          226 ------------------AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL----------  277 (710)
T ss_dssp             ------------------ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC----------
T ss_pred             ------------------eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc----------
Confidence                              0001134456778887  667766553     57899999875      311          


Q ss_pred             eeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        215 TIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       215 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                       ....+..+...+.. .++  |+|..|+..+.+    +.|.+||+.+++.. ....+..+ .....+.+++|++++.+++
T Consensus       278 -~~~~l~~~~~~~~~-~~s--~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~-~~~~~~~~~~~~~~~~lv~  351 (710)
T 2xdw_A          278 -KWVKLIDNFEGEYD-YVT--NEGTVFTFKTNRHSPNYRLINIDFTDPEES-KWKVLVPE-HEKDVLEWVACVRSNFLVL  351 (710)
T ss_dssp             -CCEEEECSSSSCEE-EEE--EETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEEECC-CSSCEEEEEEEETTTEEEE
T ss_pred             -ceEEeeCCCCcEEE-EEe--ccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cceeccCC-CCCCeEEEEEEEcCCEEEE
Confidence             12333333333332 234  558877766543    36999999876421 11122221 1113678899997776654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.51  E-value=9.7e-11  Score=90.23  Aligned_cols=224  Identities=8%  Similarity=-0.051  Sum_probs=147.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-EeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ...+.++++.+++    .++++...++.|.+||.. ++.... +......+..+++.+ ++.++++...++.|..+|.. 
T Consensus        19 ~~~p~~i~~d~~g----~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-   91 (300)
T 2qc5_A           19 DSGPYGITSSEDG----KVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-   91 (300)
T ss_dssp             TCCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred             CCCcceeeECCCC----CEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-
Confidence            4578899999887    477777678999999987 554331 122235688999998 88887777667899999987 


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++... +. .......+.++++.++++++++...++.|..+|.. ++... +.                          .
T Consensus        92 g~~~~-~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~--------------------------~  141 (300)
T 2qc5_A           92 GGFTE-YP-LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YD--------------------------L  141 (300)
T ss_dssp             SCEEE-EE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EE--------------------------C
T ss_pred             CCeEE-ec-CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-cc--------------------------C
Confidence            55432 21 12344678999999999888777768889999876 43221 10                          0


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      ......+..++++  +++.++...++.|..+|. .++..           ..........+  ..+..++++.+.++...
T Consensus       142 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~--~~i~~d~~g~l~v~~~~  207 (300)
T 2qc5_A          142 PNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE-----------EYPLPTNAAAP--VGITSGNDGALWFVEIM  207 (300)
T ss_dssp             SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCE--EEEEECTTSSEEEEETT
T ss_pred             CCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-----------EeeCCCCCCCc--ceEEECCCCCEEEEccC
Confidence            0022346778886  666666666789999997 33221           11111122223  34556677887777777


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+.|.+|+. +++.     ...........+.+++++++|++.+
T Consensus       208 ~~~i~~~~~-~g~~-----~~~~~~~~~~~~~~i~~d~~g~l~v  245 (300)
T 2qc5_A          208 GNKIGRITT-TGEI-----SEYDIPTPNARPHAITAGKNSEIWF  245 (300)
T ss_dssp             TTEEEEECT-TCCE-----EEEECSSTTCCEEEEEECSTTCEEE
T ss_pred             CCEEEEEcC-CCcE-----EEEECCCCCCCceEEEECCCCCEEE
Confidence            788999998 3321     1222223345688999999998665

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.49  E-value=3.5e-12  Score=110.00  Aligned_cols=220  Identities=8%  Similarity=0.029  Sum_probs=129.4

Q ss_pred             eeccCCCCCEEEEecCCC-----eEEEEccCCcceeEEEe------eeccceeEEEEecCCCcEEE-----EeecCCeEE
Q psy10348         19 SMDLESGRPLLAVAGSRA-----VIRIFSPAFHACVRHFY------GHGHAINELKFHPQDFNLLL-----SVSKDHTLR   82 (291)
Q Consensus        19 s~~~~~~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~-----s~~~dg~i~   82 (291)
                      +|++    .+++....++     .|.+.+...++....+.      +|...+..++|+| |+++||     .|+.+..|+
T Consensus        76 ~~dG----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~  150 (695)
T 2bkl_A           76 SRRN----GRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLH  150 (695)
T ss_dssp             EEET----TEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEE
T ss_pred             EEEC----CEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECC-CCCEEEEEECCCCCceEEEE
Confidence            3666    4666555432     34444544444333332      3445789999999 889888     455567899


Q ss_pred             EEECCCccee-eeeccccCCCCceEEEEEccCCCEEEEEecCCc-------------EEEEeccCchhhhhhccccccCC
Q psy10348         83 LWNIKTDICI-AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS-------------LKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        83 vwd~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-------------i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      +||+.+++.+ ...  +...  ....++|+|+|+.|+.++.|..             |++|++.++.....+.       
T Consensus       151 v~dl~tg~~~~~~~--~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv-------  219 (695)
T 2bkl_A          151 VIDVDSGEWSKVDV--IEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV-------  219 (695)
T ss_dssp             EEETTTCCBCSSCC--BSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE-------
T ss_pred             EEECCCCCCcCCcc--cCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE-------
Confidence            9999998765 211  0111  1267899999999999988776             9999998876321111       


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC----eEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN----CIICWKPGRLEDKELRTNETNVTIINRLNF  222 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  222 (291)
                                       .....+...+..+.|+  |++|+..+.++    .|.+|+......             ..+..
T Consensus       220 -----------------~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-------------~~l~~  269 (695)
T 2bkl_A          220 -----------------HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-------------RLLVK  269 (695)
T ss_dssp             -----------------ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-------------EEEEE
T ss_pred             -----------------EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-------------EEeec
Confidence                             0011244567788888  77777766555    677776544322             22222


Q ss_pred             CcccEEEEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        223 KDCEIWFIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       223 ~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +........+   ++|.+++...   .++.|.+||+.+++.. .....+.. .....+.+++|+ ++.+++
T Consensus       270 ~~~~~~~~~~---~~g~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~-~~~~~l~~~~~~-~~~lv~  334 (695)
T 2bkl_A          270 GVGAKYEVHA---WKDRFYVLTDEGAPRQRVFEVDPAKPARA-SWKEIVPE-DSSASLLSVSIV-GGHLSL  334 (695)
T ss_dssp             CSSCCEEEEE---ETTEEEEEECTTCTTCEEEEEBTTBCSGG-GCEEEECC-CSSCEEEEEEEE-TTEEEE
T ss_pred             CCCceEEEEe---cCCcEEEEECCCCCCCEEEEEeCCCCCcc-CCeEEecC-CCCCeEEEEEEE-CCEEEE
Confidence            2222322222   3466444443   2588999999876421 11222221 223467788887 555544

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.49  E-value=1.5e-10  Score=89.16  Aligned_cols=222  Identities=7%  Similarity=-0.091  Sum_probs=145.4

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ..+.++++.+++    .++++...++.|..||.. ++.. .+.  .....+..+++.+ ++.++++...++.|..+|.. 
T Consensus        62 ~~~~~i~~~~~g----~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-  133 (300)
T 2qc5_A           62 AKVMCLIVSSLG----DIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-  133 (300)
T ss_dssp             CCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-
T ss_pred             CcceeEEECCCC----CEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-
Confidence            567888888777    477776667899999987 6543 332  2335688999998 88888877768899999987 


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ++.....  +......+..+++.++++.+++...++.|..+|. +++... +.                          .
T Consensus       134 g~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~--------------------------~  183 (300)
T 2qc5_A          134 GTIYEYD--LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YP--------------------------L  183 (300)
T ss_dssp             SCEEEEE--CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE--------------------------C
T ss_pred             CCEEEcc--CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-ee--------------------------C
Confidence            5544321  1334567899999999996666666788999987 443221 10                          0


Q ss_pred             cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                      ..+...+..++++  +++.++....+.|.+||. .+...           ..........+  ..++.+++|++.++...
T Consensus       184 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~--~~i~~d~~g~l~v~~~~  249 (300)
T 2qc5_A          184 PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS-----------EYDIPTPNARP--HAITAGKNSEIWFTEWG  249 (300)
T ss_dssp             SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCE--EEEEECSTTCEEEEETT
T ss_pred             CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE-----------EEECCCCCCCc--eEEEECCCCCEEEeccC
Confidence            0123446788887  556666666778999997 33221           11111122223  34566777887777767


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++.|..|+.. ++    . ..+........+.+++++++|++.+
T Consensus       250 ~~~i~~~~~~-g~----~-~~~~~~~~~~~~~~i~~~~~g~l~v  287 (300)
T 2qc5_A          250 ANQIGRITND-NT----I-QEYQLQTENAEPHGITFGKDGSVWF  287 (300)
T ss_dssp             TTEEEEECTT-SC----E-EEEECCSTTCCCCCEEECTTSCEEE
T ss_pred             CCeEEEECCC-Cc----E-EEEECCccCCccceeEeCCCCCEEE
Confidence            7899999983 32    1 2222223345688999999998765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.48  E-value=3.3e-10  Score=88.57  Aligned_cols=225  Identities=8%  Similarity=-0.097  Sum_probs=136.8

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI   92 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~   92 (291)
                      ..+.+|+|++.   .++++...++.|..||.++++.. .+. ....+.+++|++ +++++++. .+ .|.+||..+++..
T Consensus        51 ~egp~~~~~~~---~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~  122 (326)
T 2ghs_A           51 GEGPTFDPASG---TAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLT  122 (326)
T ss_dssp             EEEEEEETTTT---EEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEE
T ss_pred             CcCCeEeCCCC---EEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEE
Confidence            46788998753   47777778899999999877543 333 356799999999 87877754 44 4999999877654


Q ss_pred             eeecccc-CCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         93 AIFGGVE-GHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        93 ~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ....... .....+.+++++|+|+++++...+    +...+|.+.+++.. .+.                          
T Consensus       123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~-~~~--------------------------  175 (326)
T 2ghs_A          123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT-KLF--------------------------  175 (326)
T ss_dssp             EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE-EEE--------------------------
T ss_pred             EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEE-Eee--------------------------
Confidence            3321001 113468999999999876654422    22344443333321 110                          


Q ss_pred             ccccCcceeEEEEc--CCEE-EEecCCCeEEEecCC--CC-CccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        168 RDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPG--RL-EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                        .+......++|+  ++.+ ++.+.++.|.+||+.  ++ ...       ....+..+........  .+..+++|.+.
T Consensus       176 --~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~-------~~~~~~~~~~~~~~p~--gi~~d~~G~lw  244 (326)
T 2ghs_A          176 --ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG-------KAEVFIDSTGIKGGMD--GSVCDAEGHIW  244 (326)
T ss_dssp             --EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS-------CCEEEEECTTSSSEEE--EEEECTTSCEE
T ss_pred             --CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc-------CceEEEECCCCCCCCC--eeEECCCCCEE
Confidence              012235678887  5555 445567899999975  33 210       0011222222222222  45667889877


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc-cCCceee
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS-KNGNVLL  290 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~  290 (291)
                      ++...++.|..||. +++    ....+..  ....+.+++|+ |+++.|.
T Consensus       245 va~~~~~~v~~~d~-~g~----~~~~i~~--~~~~~~~~af~g~d~~~L~  287 (326)
T 2ghs_A          245 NARWGEGAVDRYDT-DGN----HIARYEV--PGKQTTCPAFIGPDASRLL  287 (326)
T ss_dssp             EEEETTTEEEEECT-TCC----EEEEEEC--SCSBEEEEEEESTTSCEEE
T ss_pred             EEEeCCCEEEEECC-CCC----EEEEEEC--CCCCcEEEEEecCCCCEEE
Confidence            77766788999998 343    2233332  23568999998 8887663

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.46  E-value=2.5e-11  Score=96.43  Aligned_cols=233  Identities=11%  Similarity=0.035  Sum_probs=136.3

Q ss_pred             CEEEEecCCCeEEEEccCCc----ceeEEEe------e-eccceeEEEEecCCCcEEEEeecC------CeEEEEECCCc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFH----ACVRHFY------G-HGHAINELKFHPQDFNLLLSVSKD------HTLRLWNIKTD   89 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~   89 (291)
                      .+++.+..++.|+|+|+.+.    +..++++      . -...-..+...| ++ +++++..+      |.|.+.|.+++
T Consensus        97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~  174 (462)
T 2ece_A           97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSF  174 (462)
T ss_dssp             EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred             EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence            45666778899999998755    5555553      0 111345577889 77 77776555      78999999999


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEe-------------------cCCcEEEEeccCchhhhhhccccccCCCC
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-------------------MDHSLKLWDLTKPEIKDACAESYTFNPAR  150 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~  150 (291)
                      +.+..+..-......-+.+-|+|+++.++++.                   .+.+|.+||+.+++.++++...       
T Consensus       175 ~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg-------  247 (462)
T 2ece_A          175 EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG-------  247 (462)
T ss_dssp             CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC-------
T ss_pred             eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC-------
Confidence            98888732111122345688899999888885                   3689999999987655544310       


Q ss_pred             ccccccCccccCcccccccccCcceeEEEE--c--CCEEEEec------CCCeEEEecCCCCCccccccCC-Cceeeeee
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRW--L--GDFVLSKS------CENCIICWKPGRLEDKELRTNE-TNVTIINR  219 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~  219 (291)
                                         ........+.|  +  ++++++++      .+++|.+|....+.......-. ...+....
T Consensus       248 -------------------~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~  308 (462)
T 2ece_A          248 -------------------EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN  308 (462)
T ss_dssp             -------------------TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS
T ss_pred             -------------------CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc
Confidence                               01122345555  4  55555554      5678877665432110000000 00000000


Q ss_pred             e---c----CCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEecccc------------ccceee
Q psy10348        220 L---N----FKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRC------------MSAVRQ  279 (291)
Q Consensus       220 ~---~----~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~------------~~~v~~  279 (291)
                      +   .    .....  ...+..++||++|+++. ..+.|.+||+...... ++...+...+.            .+....
T Consensus       309 lp~~~~~f~~~~~~--pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~-~lv~~I~tGG~~~~~~~~~G~~~~ggPr~  385 (462)
T 2ece_A          309 LPEILKPFKAVPPL--VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP-VLTGKVKLGGIFHRADHPAGHKLTGAPQM  385 (462)
T ss_dssp             CCGGGGGGTEECCC--CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC-EEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred             ccccccccccCCCc--eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-EEEEEEEeCCeeccccccccccCCCCCCE
Confidence            0   0    00111  23455668899998877 5789999999744322 22222221110            124688


Q ss_pred             eEEccCCceee
Q psy10348        280 TTLSKNGNVLL  290 (291)
Q Consensus       280 ~~~s~~g~~l~  290 (291)
                      ++++|||++|.
T Consensus       386 ~~lSpDGk~Ly  396 (462)
T 2ece_A          386 LEISRDGRRVY  396 (462)
T ss_dssp             EEECTTSSEEE
T ss_pred             EEEcCCCCEEE
Confidence            99999999886

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.45  E-value=4.3e-11  Score=103.06  Aligned_cols=224  Identities=10%  Similarity=0.027  Sum_probs=132.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEE-----ecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC------
Q psy10348         11 ENFYTCAWSMDLESGRPLLAV-----AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH------   79 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~-----~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg------   79 (291)
                      ..+..++||||++    +||.     |+....|++||+++++.+... .+......++|+  |++.|+.++.+.      
T Consensus       129 ~~l~~~~~SpDg~----~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~  201 (693)
T 3iuj_A          129 TALDQLSFSRDGR----ILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL--GNEGFFYSSYDKPDGSEL  201 (693)
T ss_dssp             CEEEEEEECTTSS----EEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE--TTTEEEEEESSCCC----
T ss_pred             EEEEEEEECCCCC----EEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe--CCCEEEEEEecCcccccc
Confidence            4688889999994    7774     333468999999999865431 111123678899  556666666553      


Q ss_pred             -------eEEEEECCCcce--eeeeccccC-CCCceEEEEEccCCCEEEEEec----CCcEEEEeccCchh-hhhhcccc
Q psy10348         80 -------TLRLWNIKTDIC--IAIFGGVEG-HRDEVLSADFDLLGTKIMSCGM----DHSLKLWDLTKPEI-KDACAESY  144 (291)
Q Consensus        80 -------~i~vwd~~~~~~--~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~-~~~~~~~~  144 (291)
                             .|++|++.++..  ...+. ... |......+.|+|+|++|+....    +..|+++|+.++.. ...+.   
T Consensus       202 ~~~~~~~~v~~~~lgt~~~~~~~v~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~---  277 (693)
T 3iuj_A          202 SARTDQHKVYFHRLGTAQEDDRLVFG-AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ---  277 (693)
T ss_dssp             ---CCCCEEEEEETTSCGGGCEEEES-CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE---
T ss_pred             cccCCCcEEEEEECCCCcccceEEEe-cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe---
Confidence                   499999987643  22331 123 4456788999999998765443    35899999877631 11111   


Q ss_pred             ccCCCCccccccCccccCcccccccccCcceeE-EEEcCCE-EEEecCC---CeEEEecCCCCCccccccCCCceeeeee
Q psy10348        145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC-VRWLGDF-VLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINR  219 (291)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~-l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~  219 (291)
                                               .+...... +...++. ++....+   +.|..+|+.+....          ....
T Consensus       278 -------------------------~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----------~~~~  322 (693)
T 3iuj_A          278 -------------------------GDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA----------HWRD  322 (693)
T ss_dssp             -------------------------CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG----------GCEE
T ss_pred             -------------------------CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----------ccEE
Confidence                                     12222222 2223554 3444333   68999998875431          0223


Q ss_pred             ecCCcccEEEEEEEecCCCcEEEEEcC-CC--cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        220 LNFKDCEIWFIRFSMDYWQKILAVGNQ-SG--RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +..+...+.  .+++  ++++|+.... ++  .|++|++..+.     ...+.. ...+.+..+.++++++.|+
T Consensus       323 l~~~~~~~~--~~s~--~g~~lv~~~~~~g~~~l~~~d~~g~~-----~~~l~~-p~~~~~~~~~~~~d~~~l~  386 (693)
T 3iuj_A          323 LIPERQQVL--TVHS--GSGYLFAEYMVDATARVEQFDYEGKR-----VREVAL-PGLGSVSGFNGKHDDPALY  386 (693)
T ss_dssp             EECCCSSCE--EEEE--ETTEEEEEEEETTEEEEEEECTTSCE-----EEEECC-SSSSEEEECCCCTTCSCEE
T ss_pred             EecCCCCEE--EEEE--ECCEEEEEEEECCeeEEEEEECCCCe-----eEEeec-CCCceEEeeecCCCCCEEE
Confidence            333433332  4554  4887776664 44  68899887542     123322 2334677788888887654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.44  E-value=1.2e-11  Score=99.04  Aligned_cols=233  Identities=7%  Similarity=-0.058  Sum_probs=140.1

Q ss_pred             CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcceeeeeccc-cC---C
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDICIAIFGGV-EG---H  101 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~-~~---~  101 (291)
                      +.|.++|..+++.+..+..-..+  .++++| +++.++++.          .++.|.++|..+++.+..+..- ..   .
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~  175 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV  175 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred             CeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence            79999999999999999865555  899999 888777775          3678999999999888776310 00   1


Q ss_pred             CCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccc-------------cccCCCCccccccCccccCccc-
Q psy10348        102 RDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAES-------------YTFNPARSTRPFDTQKEHFPQF-  165 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-  165 (291)
                      ......+.++|+|++++++..  ++.|.+.|+.+++.+.++...             +.+.+++....+.......... 
T Consensus       176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~  255 (426)
T 3c75_H          176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN  255 (426)
T ss_dssp             SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred             CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence            234567899999999998874  578999999999887766531             1122222222222100000000 


Q ss_pred             -ccccccCcce-eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC----------CcccEEEEE
Q psy10348        166 -STRDIHRNYV-DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF----------KDCEIWFIR  231 (291)
Q Consensus       166 -~~~~~~~~~v-~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~  231 (291)
                       ........++ ..+.+.  +..++..+..+.+.+.|.......          .+..+..          .......+ 
T Consensus       256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~----------v~~~~~~~~~~~i~~g~~p~g~~~v-  324 (426)
T 3c75_H          256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGAT----------FRAPIEALTEAERADDWRPGGWQQT-  324 (426)
T ss_dssp             CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEE----------ECCCEESSCTTTGGGTEEECSSSCE-
T ss_pred             eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceE----------EeeeeeeccccccccccccCCceee-
Confidence             0000001111 123344  444444556788999988654321          1111110          00000112 


Q ss_pred             EEecCCCcEEEEEcC----------CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348        232 FSMDYWQKILAVGNQ----------SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL  290 (291)
Q Consensus       232 ~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~  290 (291)
                       .++|+++.+++...          ++.|.++|+.+.+.+    ..+..   .....+++|+|||+ +|+
T Consensus       325 -a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv----~~I~v---g~~P~gia~spDg~~~ly  386 (426)
T 3c75_H          325 -AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI----NKIEL---GHEIDSINVSQDAEPLLY  386 (426)
T ss_dssp             -EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEEE---EEEECEEEECCSSSCEEE
T ss_pred             -EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE----EEEEC---CCCcCeEEEccCCCEEEE
Confidence             34566887777642          357999999998643    22221   12578899999999 664

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.40  E-value=2.2e-10  Score=88.71  Aligned_cols=224  Identities=10%  Similarity=-0.013  Sum_probs=136.2

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      ........+|+|+++   .+++++..++.|..|+. +++ ...+..+...+..+++++ +++++++...++.|.+|+.. 
T Consensus        43 ~~~~~egp~~~~~g~---~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-  115 (305)
T 3dr2_A           43 QATWSEGPAWWEAQR---TLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-  115 (305)
T ss_dssp             CCSSEEEEEEEGGGT---EEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred             CCcCccCCeEeCCCC---EEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-
Confidence            345567889999984   37788888899999997 455 445555667789999999 88877665566889999986 


Q ss_pred             cceeeeeccccC-CCCceEEEEEccCCCEEEE----Eec-------------CCcEEEEeccCchhhhhhccccccCCCC
Q psy10348         89 DICIAIFGGVEG-HRDEVLSADFDLLGTKIMS----CGM-------------DHSLKLWDLTKPEIKDACAESYTFNPAR  150 (291)
Q Consensus        89 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~  150 (291)
                      ++.........+ ....+..++++++|+++++    |..             .+.|..+|..+++.....          
T Consensus       116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----------  185 (305)
T 3dr2_A          116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----------  185 (305)
T ss_dssp             SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----------
T ss_pred             CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----------
Confidence            553332211111 1234678999999998776    332             245666666555422110          


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC------CeEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE------NCIICWKPGRLEDKELRTNETNVTIINRLNF  222 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  222 (291)
                                          .......++|+  ++.|+.+...      +.|.+|++......   .    .......  
T Consensus       186 --------------------~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~---~----~~~~~~~--  236 (305)
T 3dr2_A          186 --------------------DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALH---D----RRHFASV--  236 (305)
T ss_dssp             --------------------EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEE---E----EEEEECC--
T ss_pred             --------------------cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCcc---C----CeEEEEC--
Confidence                                11234567887  5566666554      78999987643210   0    0111111  


Q ss_pred             CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        223 KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       223 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ......  .+..+++|+ |.+++.+| |.+|+... +    ....+..+   ..+.+++|+|+++.|.
T Consensus       237 ~~~~pd--gi~~d~~G~-lwv~~~~g-v~~~~~~g-~----~~~~~~~~---~~~~~~~f~~d~~~L~  292 (305)
T 3dr2_A          237 PDGLPD--GFCVDRGGW-LWSSSGTG-VCVFDSDG-Q----LLGHIPTP---GTASNCTFDQAQQRLF  292 (305)
T ss_dssp             SSSCCC--SEEECTTSC-EEECCSSE-EEEECTTS-C----EEEEEECS---SCCCEEEECTTSCEEE
T ss_pred             CCCCCC--eEEECCCCC-EEEecCCc-EEEECCCC-C----EEEEEECC---CceeEEEEeCCCCEEE
Confidence            111111  245677788 44555554 99999843 2    22333322   2588999999987664

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.38  E-value=4.2e-10  Score=89.45  Aligned_cols=217  Identities=9%  Similarity=-0.056  Sum_probs=130.2

Q ss_pred             EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEeec
Q psy10348         15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      .++++||+    ++++++.          .++.|.+||..+.+.+..+...       ......+.|+| ++++|++++.
T Consensus        70 ~i~~spDg----~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~  144 (373)
T 2mad_H           70 NPVAAHSG----SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQF  144 (373)
T ss_pred             CeEECCCC----CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEec
Confidence            88999998    4777774          3678999999998888776532       12345789999 8899888874


Q ss_pred             --CCeEEEEECCCcceeee-eccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhcc-----------
Q psy10348         78 --DHTLRLWNIKTDICIAI-FGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAE-----------  142 (291)
Q Consensus        78 --dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----------  142 (291)
                        ++.|.++| .+++.+.. +   . ...   ++.+.|++ +.+++.+.||.+.++|. +++.......           
T Consensus       145 ~~~~~v~viD-~t~~~~~~~i---~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~  215 (373)
T 2mad_H          145 AAGPAVGLVV-QGGSSDDQLL---S-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL  215 (373)
T ss_pred             CCCCeEEEEE-CCCCEEeEEc---C-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee
Confidence              47899999 99988777 5   2 222   23445555 35566777999999999 7665522110           


Q ss_pred             -ccccCCCCccccccCccccC----------ccccccc----------ccCcceeEEEEc--CCEEEEecC---------
Q psy10348        143 -SYTFNPARSTRPFDTQKEHF----------PQFSTRD----------IHRNYVDCVRWL--GDFVLSKSC---------  190 (291)
Q Consensus       143 -~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----------~~~~~v~~~~~~--~~~l~~~~~---------  190 (291)
                       ...+.+.+....+.......          .......          -.......+.++  ++.+++...         
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~  295 (373)
T 2mad_H          216 TQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHA  295 (373)
T ss_pred             ecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccC
Confidence             00011111110110000000          0000000          001112235555  455555432         


Q ss_pred             -CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEEc-CCCcEEEEEcCCCCC
Q psy10348        191 -ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVGN-QSGRTYVWDLDVQDP  260 (291)
Q Consensus       191 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~  260 (291)
                       ++.|.++|+.+.+.            +.++.... ..+  .+.++|||+ +++++. .++.|.+||+.+++.
T Consensus       296 ~~~~V~VID~~t~~v------------v~~i~~g~-~p~--~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v  353 (373)
T 2mad_H          296 AAKEVTSVTGLVGQT------------SSQISLGH-DVD--AISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             CCCeEEEEECCCCEE------------EEEEECCC-CcC--eEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence             35799999988743            55554433 233  345567799 777777 589999999999864

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.37  E-value=4.6e-10  Score=87.12  Aligned_cols=200  Identities=9%  Similarity=0.041  Sum_probs=125.4

Q ss_pred             cceeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCcceeEE-Eee----eccceeEEEEecCCCcEEEEeecC-----
Q psy10348         10 EENFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYG----HGHAINELKFHPQDFNLLLSVSKD-----   78 (291)
Q Consensus        10 ~~~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~s~~~d-----   78 (291)
                      ...+.+++++++ +    .++++. ..+.|.+||.+ ++.... ...    ....+.++++.+ +++++++...+     
T Consensus        70 ~~~~~~i~~~~~~g----~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~  142 (314)
T 1pjx_A           70 GGIPAGCQCDRDAN----QLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPA  142 (314)
T ss_dssp             ECCEEEEEECSSSS----EEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTS
T ss_pred             CCCCceEEEecCCC----cEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccc
Confidence            356888999988 6    244444 34579999988 664332 211    123588999999 88887776655     


Q ss_pred             ----------CeEEEEECCCcceeeeeccccCCCCceEEEEEc----cCCCEEEEE-ecCCcEEEEecc-Cchhhhhhcc
Q psy10348         79 ----------HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD----LLGTKIMSC-GMDHSLKLWDLT-KPEIKDACAE  142 (291)
Q Consensus        79 ----------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~i~v~d~~-~~~~~~~~~~  142 (291)
                                +.|..||.. ++.....    .+......++|+    |+++.++.+ ..++.|.+||+. .++.... . 
T Consensus       143 ~~~~~~~~~~~~l~~~~~~-g~~~~~~----~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~-~-  215 (314)
T 1pjx_A          143 DYTRSMQEKFGSIYCFTTD-GQMIQVD----TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK-K-  215 (314)
T ss_dssp             CCCBTTSSSCEEEEEECTT-SCEEEEE----EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE-E-
T ss_pred             cccccccCCCCeEEEECCC-CCEEEec----cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc-e-
Confidence                      567777765 5543332    333456889999    999766555 567899999986 3321100 0 


Q ss_pred             ccccCCCCccccccCccccCcccccccccC-cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHR-NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR  219 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  219 (291)
                                           .+.....+. .....++++  |+++++...++.|.+||..+++.            +..
T Consensus       216 ---------------------~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~------------~~~  262 (314)
T 1pjx_A          216 ---------------------VWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP------------KMR  262 (314)
T ss_dssp             ---------------------EEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC------------SEE
T ss_pred             ---------------------EEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE------------eEE
Confidence                                 000001122 446778887  66777766788999999875533            233


Q ss_pred             ecCCcccEEEEEEEecCCCcEEEE-EcCCCcEEEEEcCCC
Q psy10348        220 LNFKDCEIWFIRFSMDYWQKILAV-GNQSGRTYVWDLDVQ  258 (291)
Q Consensus       220 ~~~~~~~i~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~  258 (291)
                      +..+...+..++  ++|+++.|++ ...++.|..|++...
T Consensus       263 ~~~~~~~~~~i~--~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          263 IRCPFEKPSNLH--FKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EECSSSCEEEEE--ECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EeCCCCCceeEE--ECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            333434444444  4688985554 456788999998753

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.33  E-value=3.6e-10  Score=89.06  Aligned_cols=236  Identities=12%  Similarity=0.052  Sum_probs=139.9

Q ss_pred             EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeeec-------cceeEEEEecCCCcEEEEeec
Q psy10348         15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGHG-------HAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      .++++|++.    +++++.          .++.|.+||..+++.+..+....       .....++|+| ++++++++..
T Consensus        82 ~va~spDG~----~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~  156 (386)
T 3sjl_D           82 NPVVADDGS----FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQF  156 (386)
T ss_dssp             EEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEEC
T ss_pred             cEEECCCCC----EEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEc
Confidence            399999985    666654          36789999999999988886321       2456799999 8888888764


Q ss_pred             --CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCC----
Q psy10348         78 --DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPAR----  150 (291)
Q Consensus        78 --dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~----  150 (291)
                        ++.|.++|+.+++.+..+.   -. + . ...+....+.+++.+.||++.+.++.. ++......  ..+.+..    
T Consensus       157 ~~~~~VsVID~~t~~vv~tI~---v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~--~~~~~~~~~~~  228 (386)
T 3sjl_D          157 SPAPAVGVVDLEGKAFKRMLD---VP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT--EVFHPEDEFLI  228 (386)
T ss_dssp             SSSCEEEEEETTTTEEEEEEE---CC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC--CCCSCTTSCBC
T ss_pred             CCCCeEEEEECCCCcEEEEEE---CC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec--ceecccccccc
Confidence              6899999999999888873   11 1 1 222333345677777788888888865 44321111  0111111    


Q ss_pred             ---------ccccccCccccCcccc----------ccc----------ccCcceeEEEEc--CCEEEEecC---------
Q psy10348        151 ---------STRPFDTQKEHFPQFS----------TRD----------IHRNYVDCVRWL--GDFVLSKSC---------  190 (291)
Q Consensus       151 ---------~~~~~~~~~~~~~~~~----------~~~----------~~~~~v~~~~~~--~~~l~~~~~---------  190 (291)
                               ....|.+..+....+.          ...          -.......++++  ++.++....         
T Consensus       229 ~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~  308 (386)
T 3sjl_D          229 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT  308 (386)
T ss_dssp             SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred             ccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence                     0111111111000000          000          011122335555  455555431         


Q ss_pred             -CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEE-cCCCcEEEEEcCCCCCCcceeEE
Q psy10348        191 -ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVG-NQSGRTYVWDLDVQDPSSIKFQI  267 (291)
Q Consensus       191 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~-~~dg~i~vwd~~~~~~~~~~~~~  267 (291)
                       .+.|.++|+.+.+.            +.++.... .++.  +.+++|++ +|++. ..++.|.++|..+++    ....
T Consensus       309 ~~~~V~viD~~t~kv------------~~~i~vg~-~~~~--lavs~D~~~~ly~tn~~~~~VsViD~~t~k----~~~~  369 (386)
T 3sjl_D          309 ASRFVVVLDAKTGER------------LAKFEMGH-EIDS--INVSQDEKPLLYALSTGDKTLYIHDAESGE----ELRS  369 (386)
T ss_dssp             CEEEEEEEETTTCCE------------EEEEEEEE-EECE--EEECSSSSCEEEEEETTTTEEEEEETTTCC----EEEE
T ss_pred             CCCEEEEEECCCCeE------------EEEEECCC-Ccce--EEECCCCCeEEEEEcCCCCeEEEEECCCCc----EEEE
Confidence             36799999988854            55554332 3344  44556686 66664 568999999999985    3344


Q ss_pred             EeccccccceeeeEEccC
Q psy10348        268 LSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       268 ~~~~~~~~~v~~~~~s~~  285 (291)
                      +...+   ..+.|.+++|
T Consensus       370 i~~~~---~p~~l~~s~d  384 (386)
T 3sjl_D          370 VNQLG---HGPQVITTAD  384 (386)
T ss_dssp             ECCCC---SSCCEEEECC
T ss_pred             ecCCC---CCceeEECCc
Confidence            44433   4566788887

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.32  E-value=3e-09  Score=83.73  Aligned_cols=260  Identities=11%  Similarity=-0.009  Sum_probs=144.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEec--CCCeEEEEccCCcceeEEE-------eeeccceeEEEEecCCCcEEEEeec----
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAG--SRAVIRIFSPAFHACVRHF-------YGHGHAINELKFHPQDFNLLLSVSK----   77 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~s~~~----   77 (291)
                      .....+++++++    +++++..  .++.++||.+.+++.. .+       ..+-..+..+++.+ +++++++-..    
T Consensus        17 ~~p~~va~~~~g----~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~   90 (343)
T 2qe8_A           17 LAPGNITLTPDG----RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSK   90 (343)
T ss_dssp             SCEEEEEECTTS----CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHT
T ss_pred             CCcceEEECCCC----CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcC
Confidence            578899999988    4777753  2343566665455432 22       12446789999999 7777665443    


Q ss_pred             -CCeEEEEECCCcceeeeecc---ccCCCCceEEEEEccCCCEE-EEEe---cCCcEEEEeccCchhhhhhccccccCCC
Q psy10348         78 -DHTLRLWNIKTDICIAIFGG---VEGHRDEVLSADFDLLGTKI-MSCG---MDHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        78 -dg~i~vwd~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l-~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                       ++.|.+||+.+++.+..+..   ...+...+..+++++++..+ ++-.   .++.|.+||+.+++..+.+..+....+.
T Consensus        91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~  170 (343)
T 2qe8_A           91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE  170 (343)
T ss_dssp             SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred             CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence             57899999998886665521   01223456899999865554 4444   5789999999887754443221111111


Q ss_pred             CccccccCccccCcccc--cccc----cCcceeEEEEc--CCEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeee
Q psy10348        150 RSTRPFDTQKEHFPQFS--TRDI----HRNYVDCVRWL--GDFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRL  220 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~--~~~~----~~~~v~~~~~~--~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~  220 (291)
                      .......   ..  .+.  ...+    -...+..++++  ++.|+.+..++ .+..++............. ....+...
T Consensus       171 ~~~~~~~---g~--~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~  244 (343)
T 2qe8_A          171 DIDLVID---GV--PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE-LGSKIERY  244 (343)
T ss_dssp             SCCCEET---TE--ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH-HHTTCEEE
T ss_pred             ccceeEC---CE--EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh-hhcceEec
Confidence            1000000   00  000  0000    01236778898  66777766555 5555543211100000000 00000000


Q ss_pred             cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       221 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                       ++.....  .++++++|.++++...++.|.+||..+++    ....... .....+.+++|+++|++++
T Consensus       245 -g~~g~pd--gia~d~~G~l~va~~~~~~V~~~d~~~G~----~~~~~~~-~~~~~p~~va~~~~g~l~v  306 (343)
T 2qe8_A          245 -SEKPICD--GISIDKDHNIYVGDLAHSAIGVITSADRA----YKLLVTD-EKLSWTDSFNFGSDGYLYF  306 (343)
T ss_dssp             -EECCSCS--CEEECTTCCEEEEEGGGTEEEEEETTTTE----EEEEEEC-GGGSCEEEEEECTTSCEEE
T ss_pred             -ccCCCCc--eEEECCCCCEEEEccCCCeEEEEECCCCC----EEEEEEC-CceecCCeeEECCCCcEEE
Confidence             1111111  25667889999999999999999985542    2222222 2345688999999998765

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.30  E-value=7.1e-10  Score=87.40  Aligned_cols=103  Identities=8%  Similarity=-0.142  Sum_probs=78.7

Q ss_pred             EEEEecCCC----eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcceee
Q psy10348         28 LLAVAGSRA----VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDICIA   93 (291)
Q Consensus        28 ~l~~~~~dg----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~   93 (291)
                      .+++-..++    .|.++|..+++.+.++..-..+  .+.++| ++++++++.          .++.|.+||+.+++.+.
T Consensus        34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~  110 (368)
T 1mda_H           34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA  110 (368)
T ss_dssp             EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred             EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence            444444445    8899999999999999865566  799999 888888876          36889999999999988


Q ss_pred             eeccccCC----CCceEEEEEccCCCEEEEEec--CCcEEE--EeccC
Q psy10348         94 IFGGVEGH----RDEVLSADFDLLGTKIMSCGM--DHSLKL--WDLTK  133 (291)
Q Consensus        94 ~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~--d~~i~v--~d~~~  133 (291)
                      .+..-.+.    ......++++|+|++++++..  +..+.+  +|+.+
T Consensus       111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            87310000    134567999999999998874  467888  99876

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.28  E-value=6.1e-09  Score=80.23  Aligned_cols=192  Identities=11%  Similarity=0.021  Sum_probs=118.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee----eccceeEEEEecCCCcEEEEeecC-----
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG----HGHAINELKFHPQDFNLLLSVSKD-----   78 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~~d-----   78 (291)
                      .....+.++++++++    .++++ . ++.|.+||.++++.......    ....+..+++.| +++++++...+     
T Consensus        51 ~~~~~~~~i~~~~dG----~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~  123 (297)
T 3g4e_A           51 TMDAPVSSVALRQSG----GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPA  123 (297)
T ss_dssp             ECSSCEEEEEEBTTS----SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTT
T ss_pred             eCCCceEEEEECCCC----CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccc
Confidence            345778899999988    45554 3 56899999987765433221    123578899999 88877754322     


Q ss_pred             ----CeEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEecc--CchhhhhhccccccCCCC
Q psy10348         79 ----HTLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLT--KPEIKDACAESYTFNPAR  150 (291)
Q Consensus        79 ----g~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~--~~~~~~~~~~~~~~~~~~  150 (291)
                          ..-.||.+.. ++.....    ........++|+|+++.|+. .+.++.|.+||+.  ++..... .         
T Consensus       124 ~~~~~~~~l~~~d~~g~~~~~~----~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~-~---------  189 (297)
T 3g4e_A          124 VLERHQGALYSLFPDHHVKKYF----DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR-R---------  189 (297)
T ss_dssp             BCCTTCEEEEEECTTSCEEEEE----EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE-E---------
T ss_pred             cccCCCcEEEEEECCCCEEEEe----eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc-E---------
Confidence                2234555443 3333222    33445688999999987654 4557889999973  4432100 0         


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW  228 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (291)
                                   .+.....+......++++  |++.++...++.|..||..+++.            +..+..+...+.
T Consensus       190 -------------~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~------------~~~i~~p~~~~t  244 (297)
T 3g4e_A          190 -------------SVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR------------LQTVKLPVDKTT  244 (297)
T ss_dssp             -------------EEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE------------EEEEECSSSBEE
T ss_pred             -------------EEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE------------EEEEECCCCCce
Confidence                         000001123456778887  66666666778999999987643            556665655666


Q ss_pred             EEEEEecCCCcEEEEEcC
Q psy10348        229 FIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       229 ~~~~~~~~~~~~l~~~~~  246 (291)
                      .++|. .|+++.|++++.
T Consensus       245 ~~~f~-g~d~~~L~vt~~  261 (297)
T 3g4e_A          245 SCCFG-GKNYSEMYVTCA  261 (297)
T ss_dssp             EEEEE-SGGGCEEEEEEB
T ss_pred             EEEEe-CCCCCEEEEEcC
Confidence            66665 145676665553

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.26  E-value=2.2e-10  Score=99.48  Aligned_cols=195  Identities=9%  Similarity=-0.014  Sum_probs=120.8

Q ss_pred             EEEEeeeccCCCCCEEEEecCCC--------------eEEEEccCCcce--eEEEee--eccceeEEEEecCCCcEEEEe
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRA--------------VIRIFSPAFHAC--VRHFYG--HGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg--------------~i~vw~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      ..++|+|| .    .|+.++.++              .|++|++.++..  ...+..  +...+..+.|+| ++++|+..
T Consensus       212 ~~~~wspD-~----~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~  285 (741)
T 1yr2_A          212 SGLAWLGN-D----ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVIT  285 (741)
T ss_dssp             CCCEESTT-S----EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEE
T ss_pred             ccEEEECC-C----EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEE
Confidence            57889988 6    666666544              389999987653  222332  223578999999 88888877


Q ss_pred             ecCC-----eEEEEECCCc--ceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCch-hhhhhccc
Q psy10348         76 SKDH-----TLRLWNIKTD--ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPE-IKDACAES  143 (291)
Q Consensus        76 ~~dg-----~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~-~~~~~~~~  143 (291)
                      +.++     .|.+||+.++  +....+   ..+...+.... +|+|+.|+..+.+    +.|.+||+.++. ....+.  
T Consensus       286 ~~~~~~~~~~l~~~d~~~~~~~~~~~l---~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~--  359 (741)
T 1yr2_A          286 SSEGTDPVNTVHVARVTNGKIGPVTAL---IPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV--  359 (741)
T ss_dssp             EECTTCSCCEEEEEEEETTEECCCEEE---ECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE--
T ss_pred             EEccCCCcceEEEEECCCCCCcccEEe---cCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe--
Confidence            6544     8999999876  313344   34444444443 4889988887763    459999987642 111110  


Q ss_pred             cccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCC-CCCccccccCCCceeeeeeec
Q psy10348        144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPG-RLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~  221 (291)
                                               ..+...+..+.+. +.++++...|+..++|.+. .+.            ....+.
T Consensus       360 -------------------------~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~------------~~~~l~  402 (741)
T 1yr2_A          360 -------------------------PESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGK------------PAGAVS  402 (741)
T ss_dssp             -------------------------CCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSC------------EEEECB
T ss_pred             -------------------------cCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC------------ceeecc
Confidence                                     1133446677777 5577777888887777553 221            133343


Q ss_pred             CC-cccEEEEEEEecCCCcEEEEE----cCCCcEEEEEcCCCC
Q psy10348        222 FK-DCEIWFIRFSMDYWQKILAVG----NQSGRTYVWDLDVQD  259 (291)
Q Consensus       222 ~~-~~~i~~~~~~~~~~~~~l~~~----~~dg~i~vwd~~~~~  259 (291)
                      .+ ...+.  .++++|++..|+..    ...++|++||+.+++
T Consensus       403 ~~~~~~v~--~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          403 LPGIGSAS--GLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             CSSSCEEE--EEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             CCCCeEEE--EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            32 33333  45556677766532    345789999998764

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.22  E-value=1.8e-08  Score=74.52  Aligned_cols=188  Identities=10%  Similarity=0.084  Sum_probs=121.0

Q ss_pred             eeEEEeeeccc--eeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-c
Q psy10348         48 CVRHFYGHGHA--INELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-M  122 (291)
Q Consensus        48 ~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~  122 (291)
                      .++++. |...  ...|.|+  ++.++.+.+.+|  .|+++|+++++.+..+.   - ..........+++..|+... .
T Consensus        33 vv~~~p-hd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~---l-~~~~FgeGit~~g~~ly~ltw~  105 (262)
T 3nol_A           33 IVHSYP-HDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE---L-GKRYFGEGISDWKDKIVGLTWK  105 (262)
T ss_dssp             EEEEEE-CCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE---C-CTTCCEEEEEEETTEEEEEESS
T ss_pred             EEEEec-CCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe---c-CCccceeEEEEeCCEEEEEEee
Confidence            445553 5443  4788888  457777777776  89999999999888772   2 22333322333455665555 4


Q ss_pred             CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCC
Q psy10348        123 DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       123 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      ++.+.+||..+.+.+.++..                             ...=..++++++.|+.+..++.|.++|..+.
T Consensus       106 ~~~v~v~D~~t~~~~~ti~~-----------------------------~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~  156 (262)
T 3nol_A          106 NGLGFVWNIRNLRQVRSFNY-----------------------------DGEGWGLTHNDQYLIMSDGTPVLRFLDPESL  156 (262)
T ss_dssp             SSEEEEEETTTCCEEEEEEC-----------------------------SSCCCCEEECSSCEEECCSSSEEEEECTTTC
T ss_pred             CCEEEEEECccCcEEEEEEC-----------------------------CCCceEEecCCCEEEEECCCCeEEEEcCCCC
Confidence            88999999999998776641                             1112356677776666666889999999887


Q ss_pred             CccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc----
Q psy10348        203 EDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC----  273 (291)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~----  273 (291)
                      +.            +.++....     ..++-+.+.   +|+..+..-.++.|.+.|..+++..    ..+...+.    
T Consensus       157 ~v------------~~~I~V~~~g~~~~~lNELe~~---~G~lyan~w~~~~I~vIDp~tG~V~----~~Id~~~L~~~~  217 (262)
T 3nol_A          157 TP------------VRTITVTAHGEELPELNELEWV---DGEIFANVWQTNKIVRIDPETGKVT----GIIDLNGILAEA  217 (262)
T ss_dssp             SE------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSEEEEECTTTCBEE----EEEECTTGGGGS
T ss_pred             eE------------EEEEEeccCCccccccceeEEE---CCEEEEEEccCCeEEEEECCCCcEE----EEEECCcCcccc
Confidence            54            33333211     122234443   3766666667889999999998543    33332211    


Q ss_pred             ------ccceeeeEEccCCceee
Q psy10348        274 ------MSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       274 ------~~~v~~~~~s~~g~~l~  290 (291)
                            ....+.|||+|+++.|.
T Consensus       218 ~~~~~~~~vlNGIA~dp~~~~lf  240 (262)
T 3nol_A          218 GPLPSPIDVLNGIAWDKEHHRLF  240 (262)
T ss_dssp             CSCCSSCCCEEEEEEETTTTEEE
T ss_pred             ccccCcCCceEEEEEcCCCCEEE
Confidence                  23568999999887664

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.20  E-value=5.5e-09  Score=82.22  Aligned_cols=207  Identities=9%  Similarity=0.023  Sum_probs=125.1

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecC-----CCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEee--
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGS-----RAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVS--   76 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~--   76 (291)
                      -..+.++++.+++    .++++-..     ++.|.+||+.+++.+..+...      ...+..+++.+.++..+++..  
T Consensus        66 ~~~p~gv~~d~~g----~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~  141 (343)
T 2qe8_A           66 FDTVLGIKSDGNG----IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP  141 (343)
T ss_dssp             CSCEEEEEECSSS----EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred             eeEeeEEEEcCCC----cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence            4578899999987    35555433     578999999999877776532      234689999984455556655  


Q ss_pred             -cCCeEEEEECCCcceeeeeccccCC-----------------------------CCceEEEEEccCCCEEEEEecCCcE
Q psy10348         77 -KDHTLRLWNIKTDICIAIFGGVEGH-----------------------------RDEVLSADFDLLGTKIMSCGMDHSL  126 (291)
Q Consensus        77 -~dg~i~vwd~~~~~~~~~~~~~~~~-----------------------------~~~i~~~~~~~~~~~l~~~~~d~~i  126 (291)
                       .++.|.+||+.+++....+.   +|                             ...+..++|+|+++.|+.+..++. 
T Consensus       142 ~~~~~i~v~d~~~g~~~r~~~---~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-  217 (343)
T 2qe8_A          142 DDKAALIRVDLQTGLAARVLQ---GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-  217 (343)
T ss_dssp             GGGCEEEEEETTTCCEEEECT---TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-
T ss_pred             CCCCeEEEEECCCCCEEEEec---CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-
Confidence             67899999998877655441   11                             123688999999998888877663 


Q ss_pred             EEEeccCchhhh-hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC
Q psy10348        127 KLWDLTKPEIKD-ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       127 ~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      ++|.+....... .+..         .....       .+. ..++......++++  |+++++...++.|.+||..+++
T Consensus       218 ~l~~~~~~~~~~~~~~~---------~~~~~-------~~~-~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~  280 (343)
T 2qe8_A          218 SMYRIKSADLSNLQLTD---------AELGS-------KIE-RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA  280 (343)
T ss_dssp             EEEEEEHHHHTCTTCCH---------HHHHT-------TCE-EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred             eEEEEEHHHhcCCCCCh---------hhhhc-------ceE-ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence            455443221100 0000         00000       000 00123345667887  7788888889999999984432


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      .          ..+.... .....  ..++++++++++++.+..+.+.+|.
T Consensus       281 ~----------~~~~~~~-~~~~p--~~va~~~~g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          281 Y----------KLLVTDE-KLSWT--DSFNFGSDGYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             E----------EEEEECG-GGSCE--EEEEECTTSCEEEEECCGGGSGGGB
T ss_pred             E----------EEEEECC-ceecC--CeeEECCCCcEEEEeCccccccccc
Confidence            1          1111111 11223  3455567788888877666655554

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.20  E-value=2.8e-08  Score=77.63  Aligned_cols=188  Identities=14%  Similarity=-0.018  Sum_probs=112.0

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee---e-ccceeEEEEecCCCcEEEEeec------C
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG---H-GHAINELKFHPQDFNLLLSVSK------D   78 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~~l~s~~~------d   78 (291)
                      ....+.+++|++++.    ++++ ..+ .|.+||.++++.......   . ...+..++++| +++++++...      .
T Consensus        88 ~~~~v~~i~~~~dg~----l~v~-~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~  160 (326)
T 2ghs_A           88 LPFMGSALAKISDSK----QLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGA  160 (326)
T ss_dssp             CSSCEEEEEEEETTE----EEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTC
T ss_pred             CCCcceEEEEeCCCe----EEEE-ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCc
Confidence            356789999999983    5554 444 499999988775432221   1 23588999999 8887765542      2


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEecc--Cc-hhhhhhccccccCCCCcccc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLT--KP-EIKDACAESYTFNPARSTRP  154 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~--~~-~~~~~~~~~~~~~~~~~~~~  154 (291)
                      +.|..++  +++.....    ........++|+|+++.++.+ +.++.|.+||+.  ++ ..... .             
T Consensus       161 ~~l~~~~--~g~~~~~~----~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~-~-------------  220 (326)
T 2ghs_A          161 GSIYHVA--KGKVTKLF----ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA-E-------------  220 (326)
T ss_dssp             EEEEEEE--TTEEEEEE----EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC-E-------------
T ss_pred             eEEEEEe--CCcEEEee----CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc-e-------------
Confidence            4555556  44433222    233456789999999877555 457889999986  44 31100 0             


Q ss_pred             ccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        155 FDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                               .+............++++  |++.++...++.|..||.. ++.            +..+..+...+..+++
T Consensus       221 ---------~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~------------~~~i~~~~~~~~~~af  278 (326)
T 2ghs_A          221 ---------VFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH------------IARYEVPGKQTTCPAF  278 (326)
T ss_dssp             ---------EEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE------------EEEEECSCSBEEEEEE
T ss_pred             ---------EEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE------------EEEEECCCCCcEEEEE
Confidence                     000000122345677776  6566655567889999973 322            4445545445555555


Q ss_pred             EecCCCcEEEEEcC
Q psy10348        233 SMDYWQKILAVGNQ  246 (291)
Q Consensus       233 ~~~~~~~~l~~~~~  246 (291)
                      . .++++.|++++.
T Consensus       279 ~-g~d~~~L~vt~~  291 (326)
T 2ghs_A          279 I-GPDASRLLVTSA  291 (326)
T ss_dssp             E-STTSCEEEEEEB
T ss_pred             e-cCCCCEEEEEec
Confidence            4 155776655543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.20  E-value=5.9e-09  Score=83.60  Aligned_cols=219  Identities=13%  Similarity=0.059  Sum_probs=127.8

Q ss_pred             EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEeec
Q psy10348         15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      .++++|++.    +++++.          .++.|.++|..+++.+..+.-.       ......+.|+| ++++++++..
T Consensus       122 gia~SpDgk----~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~  196 (426)
T 3c75_H          122 HPVAAEDGS----FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQF  196 (426)
T ss_dssp             EEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEEC
T ss_pred             ceEECCCCC----EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEec
Confidence            799999985    666654          4679999999999998887632       13456789999 8888888764


Q ss_pred             --CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhh----hc-------cc
Q psy10348         78 --DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDA----CA-------ES  143 (291)
Q Consensus        78 --dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~----~~-------~~  143 (291)
                        ++.|.+.|+.+++.+..+..  +  ..   ....|++ +.+++.+.||.+.+.++.+++....    +.       ..
T Consensus       197 ~~~~~VsVID~~t~kvv~~I~v--~--g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~  269 (426)
T 3c75_H          197 SPAPAVGVVDLEGKTFDRMLDV--P--DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINH  269 (426)
T ss_dssp             SSSCEEEEEETTTTEEEEEEEC--C--SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSC
T ss_pred             CCCCeEEEEECCCCeEEEEEEc--C--Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeE
Confidence              57899999999998887731  1  11   2223332 3455555666666666644433211    00       01


Q ss_pred             cccCCCCccccccCccccC-------------cccccc-----c--ccCcceeEEEEc--CCEEEEec----------CC
Q psy10348        144 YTFNPARSTRPFDTQKEHF-------------PQFSTR-----D--IHRNYVDCVRWL--GDFVLSKS----------CE  191 (291)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~-----~--~~~~~v~~~~~~--~~~l~~~~----------~d  191 (291)
                      ..+.+++....+.......             ..+...     .  ........++++  ++.+++..          .+
T Consensus       270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s  349 (426)
T 3c75_H          270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS  349 (426)
T ss_dssp             CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred             eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence            1112222111111110000             000000     0  001111225665  45555443          24


Q ss_pred             CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEEc-CCCcEEEEEcCCCCC
Q psy10348        192 NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVGN-QSGRTYVWDLDVQDP  260 (291)
Q Consensus       192 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~  260 (291)
                      +.|.++|+.+.+.            +.++.... ..  ..+.++||++ ++++.. .++.|.++|+.+.+.
T Consensus       350 ~~VsVID~~T~kv------------v~~I~vg~-~P--~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv  405 (426)
T 3c75_H          350 RFVVVLNAETGER------------INKIELGH-EI--DSINVSQDAEPLLYALSAGTQTLHIYDAATGEE  405 (426)
T ss_dssp             EEEEEEETTTCCE------------EEEEEEEE-EE--CEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred             CEEEEEECCCCeE------------EEEEECCC-Cc--CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence            6899999998854            55554332 12  3355667798 888887 599999999999863

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.20  E-value=1.8e-08  Score=75.28  Aligned_cols=192  Identities=9%  Similarity=-0.006  Sum_probs=121.5

Q ss_pred             cceeEEEeeecc--ceeEEEEecCCCcEEEEeec--CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe
Q psy10348         46 HACVRHFYGHGH--AINELKFHPQDFNLLLSVSK--DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        46 ~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      .+.+.++. |..  ....+.|++ ++.++++.+.  ++.|.+.|+.+++.+..+..  +.......+++.  +..|+.+.
T Consensus         9 ~~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~--g~~lyv~t   82 (266)
T 2iwa_A            9 VEVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTLL--NEKLYQVV   82 (266)
T ss_dssp             EEEEEEEE-CCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEE--TTEEEEEE
T ss_pred             ceEEEEEE-CCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEEe--CCEEEEEE
Confidence            34555664 443  357899999 6666555543  57999999999998887631  122222345554  55555554


Q ss_pred             -cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCC
Q psy10348        122 -MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPG  200 (291)
Q Consensus       122 -~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~  200 (291)
                       .++.+.++|..+.+.+.++...   .                         ..-..++++++.++++..++.|.++|..
T Consensus        83 ~~~~~v~viD~~t~~v~~~i~~g---~-------------------------~~g~glt~Dg~~l~vs~gs~~l~viD~~  134 (266)
T 2iwa_A           83 WLKNIGFIYDRRTLSNIKNFTHQ---M-------------------------KDGWGLATDGKILYGSDGTSILYEIDPH  134 (266)
T ss_dssp             TTCSEEEEEETTTTEEEEEEECC---S-------------------------SSCCEEEECSSSEEEECSSSEEEEECTT
T ss_pred             ecCCEEEEEECCCCcEEEEEECC---C-------------------------CCeEEEEECCCEEEEECCCCeEEEEECC
Confidence             4889999999998877665310   0                         1113466677766666678999999998


Q ss_pred             CCCccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc---
Q psy10348        201 RLEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR---  272 (291)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---  272 (291)
                      +.+.            +..+....     ...+.+.+.   +++..+....++.|.+.|..+++.+    ..+...+   
T Consensus       135 t~~v------------~~~I~Vg~~~~p~~~~nele~~---dg~lyvn~~~~~~V~vID~~tg~V~----~~I~~~g~~~  195 (266)
T 2iwa_A          135 TFKL------------IKKHNVKYNGHRVIRLNELEYI---NGEVWANIWQTDCIARISAKDGTLL----GWILLPNLRK  195 (266)
T ss_dssp             TCCE------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSEEEEEETTTCCEE----EEEECHHHHH
T ss_pred             CCcE------------EEEEEECCCCcccccceeEEEE---CCEEEEecCCCCeEEEEECCCCcEE----EEEECCCccc
Confidence            8754            33333221     123344444   3766666657889999999998643    3332211   


Q ss_pred             --------cccceeeeEEccCCceee
Q psy10348        273 --------CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       273 --------~~~~v~~~~~s~~g~~l~  290 (291)
                              .....+.++|+|+++.|.
T Consensus       196 ~~~~~~~~~~~v~nGIa~~~~~~~lf  221 (266)
T 2iwa_A          196 KLIDEGFRDIDVLNGIAWDQENKRIF  221 (266)
T ss_dssp             HHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred             ccccccccccCceEEEEEcCCCCEEE
Confidence                    113568999999988664

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.20  E-value=1.1e-08  Score=82.50  Aligned_cols=189  Identities=8%  Similarity=0.037  Sum_probs=115.6

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC--cEEEEeccCc
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH--SLKLWDLTKP  134 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~  134 (291)
                      .....|+|++ +++++++...++.|++||..++......   .. ..... ++|+++++.|+++..++  .|.+++...+
T Consensus       131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~---~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~  204 (409)
T 3hrp_A          131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVH---PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG  204 (409)
T ss_dssp             CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEE---ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred             CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEee---cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence            3567899999 8888888777899999999877665554   22 22333 99999999999888766  7888887654


Q ss_pred             hhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC
Q psy10348        135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET  212 (291)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  212 (291)
                      .....+..   ..                     ......+.+++++  +..|+.+..++.|..||.......       
T Consensus       205 ~~~~~~g~---~~---------------------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-------  253 (409)
T 3hrp_A          205 WAPTRIGQ---LG---------------------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-------  253 (409)
T ss_dssp             TCEEEEEE---CC---------------------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-------
T ss_pred             ceeEEeee---cc---------------------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-------
Confidence            42211100   00                     0022345667776  345666777889999998765431       


Q ss_pred             ceeeeee--ecCCcccE-EEEEEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc---c---------cccc
Q psy10348        213 NVTIINR--LNFKDCEI-WFIRFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP---R---------CMSA  276 (291)
Q Consensus       213 ~~~~~~~--~~~~~~~i-~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~---------~~~~  276 (291)
                         .+..  ..+..... . ..++++|+ +.++++-..++.|+.|+....     ........   +         .-..
T Consensus       254 ---~~~~~~~~g~~~~~P~-~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~  324 (409)
T 3hrp_A          254 ---LIKQLELSGSLGTNPG-PYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----CEWFCGSATQKTVQDGLREEALFAQ  324 (409)
T ss_dssp             ---EEEECCCCSCCCCSSC-CEEEEETTTTEEEEEETTTTEEEEECTTCC-----EEEEEECTTCCSCBCEEGGGCBCSS
T ss_pred             ---EEecccccCCCCCCcc-ccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----EEEEEeCCCCCCcCCCcccccEeCC
Confidence               1110  11111111 1 03455573 566666677889999987653     11121111   0         1134


Q ss_pred             eeeeEEccCCceeeC
Q psy10348        277 VRQTTLSKNGNVLLC  291 (291)
Q Consensus       277 v~~~~~s~~g~~l~s  291 (291)
                      ...++|+|+|+++++
T Consensus       325 P~gia~d~dG~lyva  339 (409)
T 3hrp_A          325 PNGMTVDEDGNFYIV  339 (409)
T ss_dssp             EEEEEECTTCCEEEE
T ss_pred             CeEEEEeCCCCEEEE
Confidence            789999999987653

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.16  E-value=8.1e-09  Score=88.47  Aligned_cols=111  Identities=11%  Similarity=0.141  Sum_probs=78.9

Q ss_pred             EEEEecC------CCeEEEEccCCcceeEEEeeeccc--------------------------------eeEEEEecCCC
Q psy10348         28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHGHA--------------------------------INELKFHPQDF   69 (291)
Q Consensus        28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~--------------------------------v~~~~~~~~~~   69 (291)
                      .+++++.      +|.|+.+|.++|+.+..+......                                ...+++.| ++
T Consensus       176 ~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~  254 (677)
T 1kb0_A          176 KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-EL  254 (677)
T ss_dssp             EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TT
T ss_pred             EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CC
Confidence            5666553      799999999999998877632211                                13578888 66


Q ss_pred             cEEEEeecCC-------------------eEEEEECCCcceeeeeccccCCC-------CceEEEEEccCC---CEEEEE
Q psy10348         70 NLLLSVSKDH-------------------TLRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLG---TKIMSC  120 (291)
Q Consensus        70 ~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~---~~l~~~  120 (291)
                      .+++.+..++                   .|..+|.++|+.+..++. ..|.       ....-+....+|   ..++.+
T Consensus       255 ~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~  333 (677)
T 1kb0_A          255 NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE-TPGDNWDYTSTQPMILADIKIAGKPRKVILHA  333 (677)
T ss_dssp             TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCCCSCCEEEEEEETTEEEEEEEEC
T ss_pred             CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec-CCCcccccccCCCcEEEecccCCcEeeEEEEE
Confidence            7777776654                   599999999999887742 1221       122233444467   678999


Q ss_pred             ecCCcEEEEeccCchhhhhh
Q psy10348        121 GMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus       121 ~~d~~i~v~d~~~~~~~~~~  140 (291)
                      +.+|.++++|.++++.+...
T Consensus       334 ~~~G~l~~lD~~tG~~l~~~  353 (677)
T 1kb0_A          334 PKNGFFFVLDRTNGKFISAK  353 (677)
T ss_dssp             CTTSEEEEEETTTCCEEEEE
T ss_pred             CCCCEEEEEECCCCCEeccc
Confidence            99999999999999987654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.16  E-value=2.1e-08  Score=74.90  Aligned_cols=198  Identities=11%  Similarity=0.024  Sum_probs=127.6

Q ss_pred             eEEEEeeeccCCCCCEEEEecC--CCeEEEEccCCcceeEEEeeecc-ceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGS--RAVIRIFSPAFHACVRHFYGHGH-AINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ...+.|++++    .++++.+.  ++.|+++|+.+++.+..+.-... ....+++..  +.+.++...++.+.++|..+.
T Consensus        23 ~~Gl~~~~dg----~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD~~t~   96 (266)
T 2iwa_A           23 TQGLVYAEND----TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYDRRTL   96 (266)
T ss_dssp             EEEEEECSTT----EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEETTTT
T ss_pred             cccEEEeCCC----eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEECCCC
Confidence            5789999875    35554443  68999999999999888763222 223455553  355566667899999999999


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      +.+..+..  + ...  ...++++|+.++.+..++.|.++|..+.+....+.-...                       .
T Consensus        97 ~v~~~i~~--g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~-----------------------~  148 (266)
T 2iwa_A           97 SNIKNFTH--Q-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN-----------------------G  148 (266)
T ss_dssp             EEEEEEEC--C-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET-----------------------T
T ss_pred             cEEEEEEC--C-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC-----------------------C
Confidence            98888731  2 111  233556888787777789999999998876655431000                       0


Q ss_pred             ccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-------------ccEEEEEEEec
Q psy10348        170 IHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-------------CEIWFIRFSMD  235 (291)
Q Consensus       170 ~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~i~~~~~~~~  235 (291)
                      ..-..++.+.|. +...+....++.|.+.|..+++.            +..+....             .....  ++++
T Consensus       149 ~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V------------~~~I~~~g~~~~~~~~~~~~~~v~nG--Ia~~  214 (266)
T 2iwa_A          149 HRVIRLNELEYINGEVWANIWQTDCIARISAKDGTL------------LGWILLPNLRKKLIDEGFRDIDVLNG--IAWD  214 (266)
T ss_dssp             EECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCE------------EEEEECHHHHHHHHHTTCTTCCCEEE--EEEE
T ss_pred             cccccceeEEEECCEEEEecCCCCeEEEEECCCCcE------------EEEEECCCcccccccccccccCceEE--EEEc
Confidence            011124566666 44444444689999999998855            34443210             12234  4455


Q ss_pred             CCCc-EEEEEcCCCcEEEEEcCCC
Q psy10348        236 YWQK-ILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       236 ~~~~-~l~~~~~dg~i~vwd~~~~  258 (291)
                      |+++ +++++...++|.+.++...
T Consensus       215 ~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          215 QENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             CCCCEEEEECCCCCeEEEEEEecc
Confidence            6665 4555667889999998765

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.15  E-value=3e-08  Score=85.15  Aligned_cols=103  Identities=17%  Similarity=0.240  Sum_probs=73.4

Q ss_pred             CCeEEEEccCCcceeEEEeee-------------------------------ccceeEEEEecCCCcEEEEeecCCe---
Q psy10348         35 RAVIRIFSPAFHACVRHFYGH-------------------------------GHAINELKFHPQDFNLLLSVSKDHT---   80 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~~~~~~l~s~~~dg~---   80 (291)
                      +|.|+.||.++|+.+..+..-                               ......+++.| +..+++.+..++.   
T Consensus       182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~  260 (689)
T 1yiq_A          182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWD  260 (689)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccc
Confidence            789999999999998777521                               01112578888 6678888877764   


Q ss_pred             ----------------EEEEECCCcceeeeeccccCCC-------CceEEEEEccCCC---EEEEEecCCcEEEEeccCc
Q psy10348         81 ----------------LRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLGT---KIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        81 ----------------i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~  134 (291)
                                      |..+|.++|+.+..++. ..|.       .+........+|+   .++.++.+|.++++|.+++
T Consensus       261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG  339 (689)
T 1yiq_A          261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT-TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG  339 (689)
T ss_dssp             HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred             cCCCCCCCCCceeeeeEEEEEccCCceeEeeec-CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence                            99999999999887742 1121       2222223333554   7889999999999999999


Q ss_pred             hhhhh
Q psy10348        135 EIKDA  139 (291)
Q Consensus       135 ~~~~~  139 (291)
                      +.+..
T Consensus       340 ~~l~~  344 (689)
T 1yiq_A          340 ELLSA  344 (689)
T ss_dssp             CEEEE
T ss_pred             CEecc
Confidence            97643

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.13  E-value=5e-09  Score=86.27  Aligned_cols=264  Identities=11%  Similarity=0.067  Sum_probs=146.0

Q ss_pred             EEeee-ccCCCCCEEEEec-CCCeEEEEccCCcceeEEEeee-ccceeEEEE-e-cCCCcEEEEee--------------
Q psy10348         16 CAWSM-DLESGRPLLAVAG-SRAVIRIFSPAFHACVRHFYGH-GHAINELKF-H-PQDFNLLLSVS--------------   76 (291)
Q Consensus        16 ~~~s~-~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~l~s~~--------------   76 (291)
                      ...|. ++.+||+++++.. .++.|.+.|+++.++.+.+.-. ......+++ . | ++.+++.++              
T Consensus        90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~  168 (595)
T 1fwx_A           90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNME  168 (595)
T ss_dssp             EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTT
T ss_pred             cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccc
Confidence            44444 3333445666655 4567999999999988855422 245778887 4 7 777777774              


Q ss_pred             ----cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC---------------cEEEEeccCchhh
Q psy10348         77 ----KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH---------------SLKLWDLTKPEIK  137 (291)
Q Consensus        77 ----~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------~i~v~d~~~~~~~  137 (291)
                          .++.+.+.|..+.+....+.    -.+....++++|+|+++++.+.+.               .+.+.|.......
T Consensus       169 ~~~~~~~~vtvID~~t~~v~~qI~----Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~  244 (595)
T 1fwx_A          169 DVANYVNVFTAVDADKWEVAWQVL----VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA  244 (595)
T ss_dssp             CGGGEEEEEEEEETTTTEEEEEEE----ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred             cccccCceEEEEECCCCeEEEEEE----eCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence                34679999999888877762    112456688999999999888653               3667765443321


Q ss_pred             hhhccccccCCCCccccccCccccCcc-cccccccCcceeEEEEc--CCEEE-EecCCCeEEEecCCCCCccccccCCCc
Q psy10348        138 DACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIHRNYVDCVRWL--GDFVL-SKSCENCIICWKPGRLEDKELRTNETN  213 (291)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~--~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~  213 (291)
                      ..- ....+.  +....++........ ..... -.....++.++  |++++ ++..+.+|.++|+.+.+...-..-...
T Consensus       245 v~~-Gk~~~i--~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~  320 (595)
T 1fwx_A          245 IAA-GDYQEL--NGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR  320 (595)
T ss_dssp             HHH-TCSEEE--TTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred             ccC-CCeeEE--CcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence            100 000000  011111111100000 00000 11234567777  66554 455689999999986531100000000


Q ss_pred             eeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC------CCCcceeEEEec---cccccceeeeEEcc
Q psy10348        214 VTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ------DPSSIKFQILSH---PRCMSAVRQTTLSK  284 (291)
Q Consensus       214 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~---~~~~~~v~~~~~s~  284 (291)
                      ...+........   -..++++|+|....+.-.|+.|.+||+...      +........+..   ++|...-.++.++|
T Consensus       321 ~~v~~~v~vG~g---P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~  397 (595)
T 1fwx_A          321 SAVVAEPELGLG---PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA  397 (595)
T ss_dssp             GGEEECCBCCSC---EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC
T ss_pred             cceEEEcCCCCC---cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC
Confidence            112333333333   234567788944455668999999999872      111222333322   14444446678899


Q ss_pred             CCceeeC
Q psy10348        285 NGNVLLC  291 (291)
Q Consensus       285 ~g~~l~s  291 (291)
                      ||++|++
T Consensus       398 DGk~l~~  404 (595)
T 1fwx_A          398 TNDWLVC  404 (595)
T ss_dssp             CSSEEEE
T ss_pred             CCCEEEE
Confidence            9999974

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.13  E-value=7.2e-07  Score=67.44  Aligned_cols=224  Identities=6%  Similarity=-0.034  Sum_probs=130.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ......++|++++.   .++++-..++.|.+++.+.+.....+.........+++.+.++.++++-..++.|.++++...
T Consensus        35 ~~~~~gi~~d~~~~---~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~  111 (267)
T 1npe_A           35 AKVIIGLAFDCVDK---VVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT  111 (267)
T ss_dssp             EEEEEEEEEETTTT---EEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCcEEEEEEecCCC---EEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence            34567889998653   355566667899999987654433332222467899999844555556566789999998743


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ......   .........++++|++..|+.+..   .+.|..+++.... ...+.                         
T Consensus       112 ~~~~~~---~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~-------------------------  162 (267)
T 1npe_A          112 QRRVLF---DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILA-------------------------  162 (267)
T ss_dssp             SCEEEE---CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEE-------------------------
T ss_pred             CEEEEE---ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEE-------------------------
Confidence            322222   222245689999997776666554   3578777765322 11110                         


Q ss_pred             cccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                        .........++++  ++.| ++....+.|.++|......            ......... ...  ++++ ++.++++
T Consensus       163 --~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~------------~~~~~~~~~-P~g--i~~d-~~~lyva  224 (267)
T 1npe_A          163 --QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR------------RKVLEGLQY-PFA--VTSY-GKNLYYT  224 (267)
T ss_dssp             --CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE------------EEEEECCCS-EEE--EEEE-TTEEEEE
T ss_pred             --ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce------------EEEecCCCC-ceE--EEEe-CCEEEEE
Confidence              0011235677886  4444 5555578999999865322            111111111 122  3444 2444444


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV  288 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  288 (291)
                      ....+.|..+|..+++.    ...+.. +.......+++.|++.-
T Consensus       225 ~~~~~~v~~~d~~~g~~----~~~i~~-g~~~~p~gi~~~~~~~~  264 (267)
T 1npe_A          225 DWKTNSVIAMDLAISKE----MDTFHP-HKQTRLYGITIALSQCP  264 (267)
T ss_dssp             ETTTTEEEEEETTTTEE----EEEECC-SSCCCCCCEEEECSCC-
T ss_pred             ECCCCeEEEEeCCCCCc----eEEEcc-ccccccceeeecCccCC
Confidence            44678999999988742    233321 21224788999998763

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.12  E-value=4.6e-08  Score=72.32  Aligned_cols=153  Identities=10%  Similarity=-0.046  Sum_probs=105.5

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeE--EEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINE--LKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      ..+.|+. +    .++.+.+.+|.|+++|+++++.++.+ - ......  +++.  +..+......++.+.+||.++.+.
T Consensus        58 qGL~~~~-~----~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~  128 (268)
T 3nok_A           58 QGLVFHQ-G----HFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQR  128 (268)
T ss_dssp             EEEEEET-T----EEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEE
T ss_pred             ceEEEEC-C----EEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcE
Confidence            5777773 2    48888888899999999999998887 3 333433  5554  335555566789999999999999


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH  171 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (291)
                      +..+.   . ...-..++  ++++.|+.+..++.|.++|..+.+.+..+.-..  .                     ...
T Consensus       129 ~~ti~---~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~--~---------------------g~~  179 (268)
T 3nok_A          129 ERTTR---Y-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL--R---------------------GQP  179 (268)
T ss_dssp             EEEEE---C-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE--T---------------------TEE
T ss_pred             EEEEe---C-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC--C---------------------Ccc
Confidence            99884   2 12223444  567888877779999999999988766554210  0                     001


Q ss_pred             CcceeEEEEc-CCEEEEecCCCeEEEecCCCCCc
Q psy10348        172 RNYVDCVRWL-GDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       172 ~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      -..++.+.|. |.+.+..-.++.|.+.|..+++.
T Consensus       180 v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V  213 (268)
T 3nok_A          180 VELINELECANGVIYANIWHSSDVLEIDPATGTV  213 (268)
T ss_dssp             CCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE
T ss_pred             cccccccEEeCCEEEEEECCCCeEEEEeCCCCcE
Confidence            1234667776 54444444688999999998865

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.09  E-value=2e-07  Score=68.36  Aligned_cols=189  Identities=10%  Similarity=0.044  Sum_probs=118.2

Q ss_pred             ceeEEEeeecc--ceeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-e
Q psy10348         47 ACVRHFYGHGH--AINELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-G  121 (291)
Q Consensus        47 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~  121 (291)
                      +.++.+ .|..  ....+.|++  +.++.+.+.+|  .|+.+|+.+++.+..+.   - ............++.|+.. -
T Consensus        10 ~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~---l-~~~~fgeGi~~~~~~ly~ltw   82 (243)
T 3mbr_X           10 RVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE---V-PPPYFGAGIVAWRDRLIQLTW   82 (243)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE---C-CTTCCEEEEEEETTEEEEEES
T ss_pred             EEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe---C-CCCcceeEEEEeCCEEEEEEe
Confidence            344555 4553  456899986  46677766654  89999999999888762   1 1222222222234555444 4


Q ss_pred             cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCC
Q psy10348        122 MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       122 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~  201 (291)
                      .++.+.+||..+.+.+.++..                             ...=..++++++.|+.+..++.|.++|..+
T Consensus        83 ~~~~v~v~D~~tl~~~~ti~~-----------------------------~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t  133 (243)
T 3mbr_X           83 RNHEGFVYDLATLTPRARFRY-----------------------------PGEGWALTSDDSHLYMSDGTAVIRKLDPDT  133 (243)
T ss_dssp             SSSEEEEEETTTTEEEEEEEC-----------------------------SSCCCEEEECSSCEEEECSSSEEEEECTTT
T ss_pred             eCCEEEEEECCcCcEEEEEeC-----------------------------CCCceEEeeCCCEEEEECCCCeEEEEeCCC
Confidence            589999999999998776641                             111246667766666566689999999988


Q ss_pred             CCccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-----
Q psy10348        202 LEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-----  271 (291)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----  271 (291)
                      .+.            +.++....     ..++-+.+.   +|+..+..-.+..|.+.|..+++.+    ..+...     
T Consensus       134 ~~~------------~~~I~V~~~g~~~~~lNeLe~~---~G~lyanvw~s~~I~vIDp~tG~V~----~~idl~~l~~~  194 (243)
T 3mbr_X          134 LQQ------------VGSIKVTAGGRPLDNLNELEWV---NGELLANVWLTSRIARIDPASGKVV----AWIDLQALVPD  194 (243)
T ss_dssp             CCE------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTTTEEEEECTTTCBEE----EEEECGGGSTT
T ss_pred             CeE------------EEEEEEccCCcccccceeeEEe---CCEEEEEECCCCeEEEEECCCCCEE----EEEECCcCccc
Confidence            754            33333221     122233332   3666666657789999999998643    333221     


Q ss_pred             ------ccccceeeeEEccCCceee
Q psy10348        272 ------RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       272 ------~~~~~v~~~~~s~~g~~l~  290 (291)
                            ......+.+||+|+++.|.
T Consensus       195 ~~~~~~~~~~vlNGIA~d~~~~~lf  219 (243)
T 3mbr_X          195 ADALTDSTNDVLNGIAFDAEHDRLF  219 (243)
T ss_dssp             TTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred             cccccCCcCCceEEEEEcCCCCEEE
Confidence                  1123568999999877664

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.08  E-value=1.1e-07  Score=75.70  Aligned_cols=184  Identities=9%  Similarity=-0.037  Sum_probs=112.6

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccce-----eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI-----NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR  102 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~  102 (291)
                      .+++++.++.|..+|.++|+.+..........     ......   +..++.+..++.+..+|..+|+.+..........
T Consensus       145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~  221 (376)
T 3q7m_A          145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG  221 (376)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence            56666777777777777777766654322111     112222   2467778889999999999998877653100000


Q ss_pred             -C---ceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCccee
Q psy10348        103 -D---EVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVD  176 (291)
Q Consensus       103 -~---~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  176 (291)
                       .   .+..+.-.|  .+..++.++.++.+..+|..+++.+....                              .....
T Consensus       222 ~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~------------------------------~~~~~  271 (376)
T 3q7m_A          222 STEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE------------------------------LGSVN  271 (376)
T ss_dssp             --------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC------------------------------CCCEE
T ss_pred             CcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc------------------------------CCCCC
Confidence             0   000010111  24678888889999999999887654321                              11133


Q ss_pred             EEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        177 CVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       177 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                      .+...++.++.++.++.|..+|..+++.            +..... .......  ....  +..|++++.+|.|.++|.
T Consensus       272 ~~~~~~~~l~~~~~~g~l~~~d~~tG~~------------~w~~~~~~~~~~~~--~~~~--~~~l~v~~~~g~l~~~d~  335 (376)
T 3q7m_A          272 DFIVDGNRIYLVDQNDRVMALTIDGGVT------------LWTQSDLLHRLLTS--PVLY--NGNLVVGDSEGYLHWINV  335 (376)
T ss_dssp             EEEEETTEEEEEETTCCEEEEETTTCCE------------EEEECTTTTSCCCC--CEEE--TTEEEEECTTSEEEEEET
T ss_pred             CceEECCEEEEEcCCCeEEEEECCCCcE------------EEeecccCCCcccC--CEEE--CCEEEEEeCCCeEEEEEC
Confidence            4455578888888899999999988854            222221 1111111  1112  678889999999999999


Q ss_pred             CCCCC
Q psy10348        256 DVQDP  260 (291)
Q Consensus       256 ~~~~~  260 (291)
                      .+++.
T Consensus       336 ~tG~~  340 (376)
T 3q7m_A          336 EDGRF  340 (376)
T ss_dssp             TTCCE
T ss_pred             CCCcE
Confidence            99863

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.08  E-value=1.2e-08  Score=80.44  Aligned_cols=104  Identities=12%  Similarity=-0.028  Sum_probs=73.0

Q ss_pred             EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEeec
Q psy10348         15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVSK   77 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~   77 (291)
                      .+.++|++.    +++++.          .++.|.+||+.+++.+..+...       ......++++| ++++++++..
T Consensus        69 ~i~~spDg~----~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~  143 (368)
T 1mda_H           69 LAVAGHSGS----DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLF  143 (368)
T ss_dssp             EEEECTTSS----CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEEC
T ss_pred             ceEECCCCC----EEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEcc
Confidence            799999984    666664          4789999999999999998743       12457899999 8888888864


Q ss_pred             --CCeEEE--EECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccC
Q psy10348         78 --DHTLRL--WNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        78 --dg~i~v--wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~  133 (291)
                        +..|.+  +|..+   +..+.  .+.  .   ....|+++ .+++.+.|+.+.+.|+.+
T Consensus       144 ~~~~~v~V~~iD~~t---v~~i~--v~~--~---~~~~p~g~~~~~~~~~dg~~~~vd~~~  194 (368)
T 1mda_H          144 GSSAAAGLSVPGASD---DQLTK--SAS--C---FHIHPGAAATHYLGSCPASLAASDLAA  194 (368)
T ss_dssp             SSSCEEEEEETTTEE---EEEEE--CSS--C---CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred             CCCCeEEEEEEchhh---ceEEE--CCC--c---eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence              457888  99876   34441  111  1   12334443 445566788888888876

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.07  E-value=1.1e-07  Score=70.33  Aligned_cols=156  Identities=10%  Similarity=0.000  Sum_probs=103.1

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCC--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRA--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ...+.|+ ++    .++.+.+.+|  .|+++|+++++.++.+... .........+.+..+......++.+.+||.++.+
T Consensus        45 tqGL~~~-~~----~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~  118 (262)
T 3nol_A           45 TEGFFYR-NG----YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR  118 (262)
T ss_dssp             EEEEEEE-TT----EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred             cceEEEE-CC----EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence            3678887 44    3666666665  8999999999999888643 3333333333133555555568999999999999


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      .+..+.   .. ..=..+  +++++.|+.+..++.|.++|..+.+.+..+.-..                        .+
T Consensus       119 ~~~ti~---~~-~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~------------------------~g  168 (262)
T 3nol_A          119 QVRSFN---YD-GEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA------------------------HG  168 (262)
T ss_dssp             EEEEEE---CS-SCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEE------------------------TT
T ss_pred             EEEEEE---CC-CCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc------------------------CC
Confidence            998883   21 111233  3567777777668889999999988766554100                        00


Q ss_pred             c-CcceeEEEEc-CCEEEEecCCCeEEEecCCCCCc
Q psy10348        171 H-RNYVDCVRWL-GDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       171 ~-~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      . -..++.+.|. |...+..-.++.|.+.|..+++.
T Consensus       169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V  204 (262)
T 3nol_A          169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGKV  204 (262)
T ss_dssp             EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBE
T ss_pred             ccccccceeEEECCEEEEEEccCCeEEEEECCCCcE
Confidence            1 1224456666 54444444688999999998865

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.04  E-value=2.2e-07  Score=68.70  Aligned_cols=188  Identities=11%  Similarity=0.059  Sum_probs=121.1

Q ss_pred             ceeEEEeeeccc--eeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEE-EecC
Q psy10348         47 ACVRHFYGHGHA--INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMD  123 (291)
Q Consensus        47 ~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d  123 (291)
                      +.++.+ .|...  ...+.|+  ++.++.+.+.+|.|+++|+++++.+..+  +.. ...-..++.  .++.|+. .-.+
T Consensus        44 ~Vv~~~-phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-~~FgeGit~--~g~~Ly~ltw~~  115 (268)
T 3nok_A           44 HIIREY-PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME--RLG-NIFAEGLAS--DGERLYQLTWTE  115 (268)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-TCCEEEEEE--CSSCEEEEESSS
T ss_pred             EEEEEE-cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-CcceeEEEE--eCCEEEEEEccC
Confidence            344555 35433  4688887  4578888888999999999999887765  232 212233444  3444444 4458


Q ss_pred             CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCC
Q psy10348        124 HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       124 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      +.+.+||..+.+.+.++..                             ...-..++++++.|+.+..++.|.++|..+.+
T Consensus       116 ~~v~V~D~~Tl~~~~ti~~-----------------------------~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~  166 (268)
T 3nok_A          116 GLLFTWSGMPPQRERTTRY-----------------------------SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFA  166 (268)
T ss_dssp             CEEEEEETTTTEEEEEEEC-----------------------------SSCCCCEEEETTEEEEECSSSEEEEECTTTCC
T ss_pred             CEEEEEECCcCcEEEEEeC-----------------------------CCceeEEecCCCEEEEECCCCEEEEEcCCCCe
Confidence            9999999999998776641                             11124666777777777779999999998875


Q ss_pred             ccccccCCCceeeeeeecCCc--c---cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-------
Q psy10348        204 DKELRTNETNVTIINRLNFKD--C---EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-------  271 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~--~---~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-------  271 (291)
                      .            +.++....  .   .++-+.+.   +|+..+....++.|.+.|..+++.+    ..+...       
T Consensus       167 v------------~~~I~V~~~g~~v~~lNeLe~~---dG~lyanvw~s~~I~vIDp~TG~V~----~~Idl~~L~~~~~  227 (268)
T 3nok_A          167 L------------VGAVQVKLRGQPVELINELECA---NGVIYANIWHSSDVLEIDPATGTVV----GVIDASALTRAVA  227 (268)
T ss_dssp             E------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTCSEEEEECTTTCBEE----EEEECHHHHHHHT
T ss_pred             E------------EEEEEeCCCCcccccccccEEe---CCEEEEEECCCCeEEEEeCCCCcEE----EEEECCCCccccc
Confidence            4            33333221  1   22333433   4766666657889999999998643    333221       


Q ss_pred             ----ccccceeeeEEccCCceee
Q psy10348        272 ----RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       272 ----~~~~~v~~~~~s~~g~~l~  290 (291)
                          .-....+.|||+|+++.|.
T Consensus       228 ~~~~~~~~vlNGIA~dp~~~rlf  250 (268)
T 3nok_A          228 GQVTNPEAVLNGIAVEPGSGRIF  250 (268)
T ss_dssp             TTCCCTTCCEEEEEECTTTCCEE
T ss_pred             ccccCcCCceEEEEEcCCCCEEE
Confidence                1123568999999877654

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.03  E-value=3.3e-07  Score=67.18  Aligned_cols=159  Identities=9%  Similarity=-0.014  Sum_probs=105.9

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCC--CeEEEEccCCcceeEEEeeecccee--EEEEecCCCcEEEEeecCCeEEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSR--AVIRIFSPAFHACVRHFYGHGHAIN--ELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ..-...+.|+.+     .++.+.+.+  ..|+.+|+++++.++.+.... ...  .+++.  ++++......++.+.+||
T Consensus        20 ~~ftqGL~~~~~-----~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~--~~~ly~ltw~~~~v~v~D   91 (243)
T 3mbr_X           20 TAFTEGLFYLRG-----HLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAW--RDRLIQLTWRNHEGFVYD   91 (243)
T ss_dssp             TCCEEEEEEETT-----EEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred             ccccccEEEECC-----EEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence            344558888863     366666665  489999999999998886433 233  34444  345566666789999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .++.+.+..+.   .. ..-..++  +++..|+.+..++.|.++|..+.+.+.++.-..  .+                 
T Consensus        92 ~~tl~~~~ti~---~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~--~g-----------------  146 (243)
T 3mbr_X           92 LATLTPRARFR---YP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA--GG-----------------  146 (243)
T ss_dssp             TTTTEEEEEEE---CS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE--TT-----------------
T ss_pred             CCcCcEEEEEe---CC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc--CC-----------------
Confidence            99999999883   22 2223444  567777777778999999999988766554210  00                 


Q ss_pred             ccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        166 STRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                          ..-..++.+.|. |...+..-.+..|.+.|..+++..
T Consensus       147 ----~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~  183 (243)
T 3mbr_X          147 ----RPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVV  183 (243)
T ss_dssp             ----EECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred             ----cccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEE
Confidence                011234566676 444444446889999999988653

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.01  E-value=3.8e-08  Score=84.88  Aligned_cols=186  Identities=12%  Similarity=0.013  Sum_probs=109.4

Q ss_pred             eccceeEEEEecCCCcEEEE-----eecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc----
Q psy10348         55 HGHAINELKFHPQDFNLLLS-----VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS----  125 (291)
Q Consensus        55 ~~~~v~~~~~~~~~~~~l~s-----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~----  125 (291)
                      |...+..++|+| |+++||-     |+.+..|++||+.+++.+...    .+......++|+ |++.|+.++.+..    
T Consensus       127 ~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~----~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~  200 (693)
T 3iuj_A          127 GTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETP----LKDVKFSGISWL-GNEGFFYSSYDKPDGSE  200 (693)
T ss_dssp             SCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE----EEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred             CcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccc----cCCceeccEEEe-CCCEEEEEEecCccccc
Confidence            445688899999 8888874     333457999999998865432    111123567899 9999998887743    


Q ss_pred             ---------EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc-cCcceeEEEEc--CCEEEEec----
Q psy10348        126 ---------LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYVDCVRWL--GDFVLSKS----  189 (291)
Q Consensus       126 ---------i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~~~~----  189 (291)
                               |++|++.+........                        ..... |......+.|+  |++|+...    
T Consensus       201 ~~~~~~~~~v~~~~lgt~~~~~~~v------------------------~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~  256 (693)
T 3iuj_A          201 LSARTDQHKVYFHRLGTAQEDDRLV------------------------FGAIPAQHHRYVGATVTEDDRFLLISAANST  256 (693)
T ss_dssp             ----CCCCEEEEEETTSCGGGCEEE------------------------ESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred             ccccCCCcEEEEEECCCCcccceEE------------------------EecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence                     8889887765322111                        00011 23345677787  66554322    


Q ss_pred             CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE-EEcCC---CcEEEEEcCCCCCCccee
Q psy10348        190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA-VGNQS---GRTYVWDLDVQDPSSIKF  265 (291)
Q Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-~~~~d---g~i~vwd~~~~~~~~~~~  265 (291)
                      .++.|.++|+.+....           ...+..+....... +.  +++..|+ ....+   +.|..+++.++... .. 
T Consensus       257 ~~~~i~~~d~~~~~~~-----------~~~l~~~~~~~~~~-~~--~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~~-  320 (693)
T 3iuj_A          257 SGNRLYVKDLSQENAP-----------LLTVQGDLDADVSL-VD--NKGSTLYLLTNRDAPNRRLVTVDAANPGPA-HW-  320 (693)
T ss_dssp             SCCEEEEEETTSTTCC-----------CEEEECSSSSCEEE-EE--EETTEEEEEECTTCTTCEEEEEETTSCCGG-GC-
T ss_pred             CCcEEEEEECCCCCCc-----------eEEEeCCCCceEEE-Ee--ccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cc-
Confidence            2358999998765321           23333333333222 33  3355544 44433   67999999886431 11 


Q ss_pred             EEEeccccccceeeeEEccCCceee
Q psy10348        266 QILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       266 ~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ..+.  .+...+.  .|++++++|+
T Consensus       321 ~~l~--~~~~~~~--~~s~~g~~lv  341 (693)
T 3iuj_A          321 RDLI--PERQQVL--TVHSGSGYLF  341 (693)
T ss_dssp             EEEE--CCCSSCE--EEEEETTEEE
T ss_pred             EEEe--cCCCCEE--EEEEECCEEE
Confidence            2222  2233443  8999998875

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.01  E-value=4.8e-08  Score=77.85  Aligned_cols=149  Identities=3%  Similarity=-0.151  Sum_probs=95.3

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeec---------cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeecc
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHG---------HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG   97 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~   97 (291)
                      ..+++++.++.|..+|.++|+.+.......         ..+.+.. .. ++..++.++.++.|..+|.++|+.+.... 
T Consensus        54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~-  130 (376)
T 3q7m_A           54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TV-SGGHVYIGSEKAQVYALNTSDGTVAWQTK-  130 (376)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EE-ETTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eE-eCCEEEEEcCCCEEEEEECCCCCEEEEEe-
Confidence            478888889999999999999887765421         2222221 22 33567778889999999999999887652 


Q ss_pred             ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeE
Q psy10348         98 VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC  177 (291)
Q Consensus        98 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  177 (291)
                        ...........  .+..++.++.++.|..+|..+++.+.........                  . .....    ..
T Consensus       131 --~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~------------------~-~~~~~----~~  183 (376)
T 3q7m_A          131 --VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS------------------L-SLRGE----SA  183 (376)
T ss_dssp             --CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC------------------------CCC----CC
T ss_pred             --CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc------------------e-eecCC----CC
Confidence              22111111112  1457888888999999999999876544310000                  0 00000    11


Q ss_pred             EEEcCCEEEEecCCCeEEEecCCCCCcc
Q psy10348        178 VRWLGDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      ....++.++.++.++.+..+|..+++..
T Consensus       184 ~~~~~~~v~~g~~~g~l~~~d~~tG~~~  211 (376)
T 3q7m_A          184 PTTAFGAAVVGGDNGRVSAVLMEQGQMI  211 (376)
T ss_dssp             CEEETTEEEECCTTTEEEEEETTTCCEE
T ss_pred             cEEECCEEEEEcCCCEEEEEECCCCcEE
Confidence            2223667888888999999999877653

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.01  E-value=1.1e-07  Score=73.48  Aligned_cols=195  Identities=7%  Similarity=-0.033  Sum_probs=117.3

Q ss_pred             ceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348         47 ACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS  125 (291)
Q Consensus        47 ~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  125 (291)
                      ..+..+...........|+| +++ ++++...++.|..|+. +++ ...+   ..+...+..++++++|+++++...++.
T Consensus        35 ~~~~~l~~~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~---~~~~~~~~gl~~d~dG~l~v~~~~~~~  108 (305)
T 3dr2_A           35 ARLLTLYDQATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVL---LDATAFTNGNAVDAQQRLVHCEHGRRA  108 (305)
T ss_dssp             CCCEEEECCCSSEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEE---EESCSCEEEEEECTTSCEEEEETTTTE
T ss_pred             CceEEEecCCcCccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEE---eCCCCccceeeECCCCCEEEEECCCCE
Confidence            34455555556678899999 666 7778778899999998 454 3344   345667899999999997766666688


Q ss_pred             EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE----ecC---------
Q psy10348        126 LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS----KSC---------  190 (291)
Q Consensus       126 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~----~~~---------  190 (291)
                      |.+|+.. ++.. .+....   .                    ......+..++++  |++.++    |..         
T Consensus       109 v~~~~~~-g~~~-~~~~~~---~--------------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~  163 (305)
T 3dr2_A          109 ITRSDAD-GQAH-LLVGRY---A--------------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPAD  163 (305)
T ss_dssp             EEEECTT-SCEE-EEECEE---T--------------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCC
T ss_pred             EEEECCC-CCEE-EEEecc---C--------------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccc
Confidence            9999875 4321 111000   0                    0012235567776  556665    332         


Q ss_pred             ----CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC------CcEEEEEcCCCCC
Q psy10348        191 ----ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS------GRTYVWDLDVQDP  260 (291)
Q Consensus       191 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~  260 (291)
                          .+.|..+|..+++..          .+.    ......  .++++|+++.|+++...      +.|.+|++.... 
T Consensus       164 ~~~~~~~v~~~d~~~g~~~----------~~~----~~~~p~--gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-  226 (305)
T 3dr2_A          164 PELAHHSVYRLPPDGSPLQ----------RMA----DLDHPN--GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-  226 (305)
T ss_dssp             CSSSCEEEEEECSSSCCCE----------EEE----EESSEE--EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-
T ss_pred             cccCCCeEEEEcCCCCcEE----------EEe----cCCCCc--ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-
Confidence                256777776554331          111    111222  35567889988877654      789999987653 


Q ss_pred             CcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        261 SSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +... ..+.. ...+.+..++++++|++.++
T Consensus       227 l~~~-~~~~~-~~~~~pdgi~~d~~G~lwv~  255 (305)
T 3dr2_A          227 LHDR-RHFAS-VPDGLPDGFCVDRGGWLWSS  255 (305)
T ss_dssp             EEEE-EEEEC-CSSSCCCSEEECTTSCEEEC
T ss_pred             ccCC-eEEEE-CCCCCCCeEEECCCCCEEEe
Confidence            1111 11111 12345667888888886653

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.99  E-value=1.4e-10  Score=92.15  Aligned_cols=147  Identities=12%  Similarity=-0.001  Sum_probs=81.4

Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN  147 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~  147 (291)
                      ++..+++++.||.|+.||..+|+.+..+.   .  ..+.+..+..++..+++++.||.|+.||..+++.+..+.....  
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~---~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~--   80 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK---E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP--   80 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEE---C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH--
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEec---C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc--
Confidence            45788999999999999999999998873   3  4455555556777888888999999999988876543321000  


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI  227 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  227 (291)
                                      ..    ....++.   ..++.+++++.|+.|..||..+++.            +..+..+..  
T Consensus        81 ----------------~~----~~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~------------~w~~~~~~~--  123 (369)
T 2hz6_A           81 ----------------EL----VQASPCR---SSDGILYMGKKQDIWYVIDLLTGEK------------QQTLSSAFA--  123 (369)
T ss_dssp             ----------------HH----HTTCSCC--------CCCCEEEEEEEEECCC---------------------------
T ss_pred             ----------------cc----cccCceE---ecCCEEEEEeCCCEEEEEECCCCcE------------EEEecCCCc--
Confidence                            00    0001110   0255778888899999999998865            333332221  


Q ss_pred             EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348        228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  262 (291)
                        ..++  |++..+++++.|+.|+.||..+++...
T Consensus       124 --~~~~--p~~~~v~~~~~dg~v~a~d~~tG~~~W  154 (369)
T 2hz6_A          124 --DSLS--PSTSLLYLGRTEYTITMYDTKTRELRW  154 (369)
T ss_dssp             -------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred             --cccc--ccCCEEEEEecCCEEEEEECCCCCEEE
Confidence              1233  358899999999999999999987653

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.99  E-value=5e-08  Score=76.10  Aligned_cols=202  Identities=11%  Similarity=-0.014  Sum_probs=125.9

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      ..+..++.++.|..+|.+ ++.......+...+.++...+ ++. +..++.++.|..+|.. ++....+   ......+.
T Consensus       108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~---~~~~~~~~  180 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRF---KTNDAITS  180 (330)
T ss_dssp             TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEE---ECSSCCCS
T ss_pred             CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEE---ecCCCcee
Confidence            378888888999999988 777766665555667777776 555 5557778999999998 7776665   33445566


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEE
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFV  185 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l  185 (291)
                      ++...+++..++ ++  +.+..+| .+++......                            .....+.++..+ ...+
T Consensus       181 ~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~----------------------------~~~~~~~~~~~~~~g~l  228 (330)
T 3hxj_A          181 AASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFY----------------------------AGYWTVTRPAISEDGTI  228 (330)
T ss_dssp             CCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEEC----------------------------CSSCCCSCCEECTTSCE
T ss_pred             eeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEc----------------------------cCCcceeceEECCCCeE
Confidence            677777776444 44  7899999 6655432221                            022335566666 3367


Q ss_pred             EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee
Q psy10348        186 LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF  265 (291)
Q Consensus       186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  265 (291)
                      ..++.++.|..+|.. +..            +..+.........  ...++ +..|.+++.+|.|..+|. +++.    .
T Consensus       229 ~v~t~~~gl~~~~~~-g~~------------~~~~~~~~~~~~~--~~~~~-~g~l~v~t~~ggl~~~d~-~g~~----~  287 (330)
T 3hxj_A          229 YVTSLDGHLYAINPD-GTE------------KWRFKTGKRIESS--PVIGN-TDTIYFGSYDGHLYAINP-DGTE----K  287 (330)
T ss_dssp             EEEETTTEEEEECTT-SCE------------EEEEECSSCCCSC--CEECT-TSCEEEECTTCEEEEECT-TSCE----E
T ss_pred             EEEcCCCeEEEECCC-CCE------------eEEeeCCCCcccc--ceEcC-CCeEEEecCCCCEEEECC-CCcE----E
Confidence            777778888888743 322            2222222211111  22233 446777888888999985 4432    1


Q ss_pred             EEEeccccccceeeeEEccCCceee
Q psy10348        266 QILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       266 ~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .....  ....+.++...++|++.+
T Consensus       288 ~~~~~--~~~~~~~~~~d~~g~l~~  310 (330)
T 3hxj_A          288 WNFET--GSWIIATPVIDENGTIYF  310 (330)
T ss_dssp             EEEEC--SSCCCSCCEECTTCCEEE
T ss_pred             EEEEc--CCccccceEEcCCCEEEE
Confidence            22221  234677788878887654

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.98  E-value=5.1e-08  Score=80.36  Aligned_cols=221  Identities=9%  Similarity=-0.004  Sum_probs=132.7

Q ss_pred             cceeEEEEe-e-eccCCCCCEEEEec------------------CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC
Q psy10348         10 EENFYTCAW-S-MDLESGRPLLAVAG------------------SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF   69 (291)
Q Consensus        10 ~~~i~~~~~-s-~~~~~~~~~l~~~~------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~   69 (291)
                      ......+++ + |++    .++++++                  .++.+.+.|.++.+...++.--. ....++++| ++
T Consensus       133 g~~phg~~~~~~p~~----~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dG  206 (595)
T 1fwx_A          133 AKGIHGLRPQKWPRS----NYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EG  206 (595)
T ss_dssp             CCSEEEEEECCSSBC----SEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECS-SS
T ss_pred             CCCCcceeeeecCCC----cEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECC-CC
Confidence            455677777 4 777    4777773                  35789999999999888887433 457788999 88


Q ss_pred             cEEEEeecCC--------------------------------------eEEEEECCC--cce-eeeeccccCCCCceEEE
Q psy10348         70 NLLLSVSKDH--------------------------------------TLRLWNIKT--DIC-IAIFGGVEGHRDEVLSA  108 (291)
Q Consensus        70 ~~l~s~~~dg--------------------------------------~i~vwd~~~--~~~-~~~~~~~~~~~~~i~~~  108 (291)
                      +++++.+.+.                                      .|.+.|..+  ++. +..+    .-.....++
T Consensus       207 k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~I----pvg~~PhGv  282 (595)
T 1fwx_A          207 KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYI----PIANNPHGC  282 (595)
T ss_dssp             SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEE----EEESSCCCE
T ss_pred             CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEE----ecCCCceEE
Confidence            8888877553                                      355666655  333 2333    122345679


Q ss_pred             EEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEE
Q psy10348        109 DFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV  185 (291)
Q Consensus       109 ~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l  185 (291)
                      .++|||+++++++. +.+|.++|+.+.+...  ...+  .+.            ....... .-......++|+  |...
T Consensus       283 ~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~--~~~l--~~~------------~~v~~~v-~vG~gP~h~aF~~dG~aY  345 (595)
T 1fwx_A          283 NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF--YENA--DPR------------SAVVAEP-ELGLGPLHTAFDGRGNAY  345 (595)
T ss_dssp             EECTTSSEEEEECTTSSBEEEEEGGGHHHHH--HSCC--CGG------------GGEEECC-BCCSCEEEEEECTTSEEE
T ss_pred             EEcCCCCEEEEeCCCCCeEEEEECccccccc--cccc--Ccc------------cceEEEc-CCCCCcceEEECCCCeEE
Confidence            99999998877764 8899999999764321  0000  000            0000000 022346778888  6344


Q ss_pred             EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE---EEEEEEecCCCcEEEEEcC---CCc----------
Q psy10348        186 LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI---WFIRFSMDYWQKILAVGNQ---SGR----------  249 (291)
Q Consensus       186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~~~l~~~~~---dg~----------  249 (291)
                      .+...|+.|.+||+.....  ....+.....+.++..+..+-   .......+|||++|++...   |..          
T Consensus       346 ~t~~ldsqV~kwdi~~a~~--~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~  423 (595)
T 1fwx_A          346 TSLFLDSQVVKWNIEDAIR--AYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPEN  423 (595)
T ss_dssp             EEETTTTEEEEEEHHHHHH--HHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEE
T ss_pred             EEEecCCcEEEEEhhHhhh--hhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCc
Confidence            5666799999999866210  000001113455555554321   1112245788999999862   432          


Q ss_pred             EEEEEcCCCC
Q psy10348        250 TYVWDLDVQD  259 (291)
Q Consensus       250 i~vwd~~~~~  259 (291)
                      -.++|+..++
T Consensus       424 ~ql~dis~~~  433 (595)
T 1fwx_A          424 DQLIDISGDK  433 (595)
T ss_dssp             EEEEECSSSS
T ss_pred             ceEEEcCCCc
Confidence            1899996543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.98  E-value=2.2e-07  Score=74.06  Aligned_cols=185  Identities=12%  Similarity=0.080  Sum_probs=112.9

Q ss_pred             cCCCcEEEEeecCCeEEEEECCCc----ceeeeec--ccc-C-CCCceEEEEEccCCCEEEEEecC------CcEEEEec
Q psy10348         66 PQDFNLLLSVSKDHTLRLWNIKTD----ICIAIFG--GVE-G-HRDEVLSADFDLLGTKIMSCGMD------HSLKLWDL  131 (291)
Q Consensus        66 ~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~--~~~-~-~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~  131 (291)
                      ++...+++++..+++|.++|+.+.    +..+.+.  .+. . -......+...|+| .++++..+      |.|.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            633345556677889999999755    4444441  000 1 11245678889999 77766555      78999999


Q ss_pred             cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-------------------C
Q psy10348        132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-------------------C  190 (291)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-------------------~  190 (291)
                      .+.+.+.++.....                         ....-..+.|+  ++.+++..                   .
T Consensus       172 ~T~~v~~~~~~~~~-------------------------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~  226 (462)
T 2ece_A          172 YSFEPLGKWEIDRG-------------------------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY  226 (462)
T ss_dssp             TTCCEEEECCSBCT-------------------------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred             CCCeEEEEEccCCC-------------------------CccccceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence            99987766542100                         00111234454  55666664                   4


Q ss_pred             CCeEEEecCCCCCccccccCCCceeeeeeecCCc--ccEEEEEEEecCCCcEEEEEc------CCCcEEEEEcCCCCCCc
Q psy10348        191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKD--CEIWFIRFSMDYWQKILAVGN------QSGRTYVWDLDVQDPSS  262 (291)
Q Consensus       191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~  262 (291)
                      +.+|.+||+.+.+            .+.++....  ....-+.+.++|+++++++++      .+++|.+|....++.  
T Consensus       227 ~d~V~v~D~~~~k------------~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~--  292 (462)
T 2ece_A          227 GNRIHFWDLRKRK------------RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW--  292 (462)
T ss_dssp             CCEEEEEETTTTE------------EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE--
T ss_pred             CCEEEEEECCCCc------------EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce--
Confidence            7899999998763            255555431  223345566799999998887      466888877765321  


Q ss_pred             ceeEEEeccc----------------cccceeeeEEccCCceee
Q psy10348        263 IKFQILSHPR----------------CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       263 ~~~~~~~~~~----------------~~~~v~~~~~s~~g~~l~  290 (291)
                      .....+....                ....+..+.+||||++|.
T Consensus       293 ~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY  336 (462)
T 2ece_A          293 NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY  336 (462)
T ss_dssp             EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred             eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence            1111111110                024578899999999985

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.97  E-value=1e-07  Score=81.92  Aligned_cols=75  Identities=15%  Similarity=0.146  Sum_probs=54.5

Q ss_pred             EEEeeeccCCCCCEEEEecCCCe-------------------EEEEccCCcceeEEEee--ec-------cceeEEEEec
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAV-------------------IRIFSPAFHACVRHFYG--HG-------HAINELKFHP   66 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~-------------------i~vw~~~~~~~~~~~~~--~~-------~~v~~~~~~~   66 (291)
                      .+++.|+.    .+++.+..++.                   |..+|.++|+.+..++.  |.       .+........
T Consensus       239 ~~~~d~~~----~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~  314 (689)
T 1yiq_A          239 SFAYDPEL----NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI  314 (689)
T ss_dssp             CEEEETTT----TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred             ceeEcCCC----CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc
Confidence            56777766    48888887764                   99999999999988764  21       1222222223


Q ss_pred             CCCc---EEEEeecCCeEEEEECCCcceeee
Q psy10348         67 QDFN---LLLSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        67 ~~~~---~l~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                       ++.   .++.++.+|.++++|.++|+.+..
T Consensus       315 -~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~  344 (689)
T 1yiq_A          315 -DGKPRKVLMQAPKNGFFYVIDRATGELLSA  344 (689)
T ss_dssp             -TTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred             -CCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence             444   788999999999999999998743

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.95  E-value=6.9e-08  Score=82.75  Aligned_cols=156  Identities=12%  Similarity=0.137  Sum_probs=103.8

Q ss_pred             EEEeeeccCCCCCEEEEecCCC-------------------eEEEEccCCcceeEEEee--ec-------cceeEEEEec
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRA-------------------VIRIFSPAFHACVRHFYG--HG-------HAINELKFHP   66 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg-------------------~i~vw~~~~~~~~~~~~~--~~-------~~v~~~~~~~   66 (291)
                      .+++.|+.    .+++.+..++                   .|..+|.++|+.+..++.  |.       .....+....
T Consensus       247 ~~~~d~~~----~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~  322 (677)
T 1kb0_A          247 SMTFDAEL----NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI  322 (677)
T ss_dssp             CEEEETTT----TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE
T ss_pred             ceeEcCCC----CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc
Confidence            56777776    4788777654                   599999999999888763  21       1222233444


Q ss_pred             CCC---cEEEEeecCCeEEEEECCCcceeeeecccc--------CCCCce------------------------EEEEEc
Q psy10348         67 QDF---NLLLSVSKDHTLRLWNIKTDICIAIFGGVE--------GHRDEV------------------------LSADFD  111 (291)
Q Consensus        67 ~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------~~~~~i------------------------~~~~~~  111 (291)
                       ++   ..++.++.+|.+.++|..+|+.+..+..-.        ....++                        ..++++
T Consensus       323 -dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d  401 (677)
T 1kb0_A          323 -AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN  401 (677)
T ss_dssp             -TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE
T ss_pred             -CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc
Confidence             56   689999999999999999999877653100        001111                        146788


Q ss_pred             cCCCEEEEEecC-------------------------------------------CcEEEEeccCchhhhhhccccccCC
Q psy10348        112 LLGTKIMSCGMD-------------------------------------------HSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus       112 ~~~~~l~~~~~d-------------------------------------------~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      |++.++++...+                                           |.|..||+.+++.+....       
T Consensus       402 p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-------  474 (677)
T 1kb0_A          402 PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-------  474 (677)
T ss_dssp             TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-------
T ss_pred             CCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-------
Confidence            988888876543                                           567777777766554432       


Q ss_pred             CCccccccCccccCcccccccccCcceeE--EEEcCCEEEEecCCCeEEEecCCCCCc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDC--VRWLGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                                            +..++..  +.-.+++++.++.|+.+++||.++++.
T Consensus       475 ----------------------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~  510 (677)
T 1kb0_A          475 ----------------------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK  510 (677)
T ss_dssp             ----------------------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ----------------------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence                                  1111222  222377888899999999999999865

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.84  E-value=4.6e-06  Score=62.01  Aligned_cols=210  Identities=9%  Similarity=0.038  Sum_probs=126.8

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      +.+..++|+|+..   .++++...++.|...|.. ++.++.+.- -......+++.+ ++.++++.-.++.+.++++...
T Consensus        27 ~~lSGla~~~~~~---~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~  101 (255)
T 3qqz_A           27 NNISSLTWSAQSN---TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPN  101 (255)
T ss_dssp             SCEEEEEEETTTT---EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTT
T ss_pred             cCcceeEEeCCCC---EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCC
Confidence            5699999999864   466667788999999988 888877742 124577889988 7777676656788999987654


Q ss_pred             cee---eeec-c--ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         90 ICI---AIFG-G--VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        90 ~~~---~~~~-~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ..+   .... .  ....+.....++|+|.++.|+++.......+|.+. +. .....  +        ..   ..  .+
T Consensus       102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~-~~~~~--l--------~i---~~--~~  164 (255)
T 3qqz_A          102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GL-LSSNE--L--------HI---SK--DK  164 (255)
T ss_dssp             CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-ST-TCSSC--C--------EE---EE--CH
T ss_pred             CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-cc-ccCCc--e--------ee---ec--ch
Confidence            422   2221 0  02345567999999999888888876666777765 11 00000  0        00   00  00


Q ss_pred             ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-----ccEEEEEEEec
Q psy10348        164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMD  235 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~  235 (291)
                      .+. ...+...+.+++++   +.+++.......|..+|.... ..          ....+....     .....=-++++
T Consensus       165 ~~~-~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~----------~~~~L~~g~~~l~~~~~qpEGia~d  232 (255)
T 3qqz_A          165 ALQ-RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VI----------GEMSLTKGSRGLSHNIKQAEGVAMD  232 (255)
T ss_dssp             HHH-HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EE----------EEEECSTTGGGCSSCCCSEEEEEEC
T ss_pred             hhc-cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EE----------EEEEcCCccCCcccccCCCCeeEEC
Confidence            000 00122346788888   567788888899999997654 21          122222110     00112235667


Q ss_pred             CCCcEEEEEcCCCcEEEEEc
Q psy10348        236 YWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       236 ~~~~~l~~~~~dg~i~vwd~  255 (291)
                      ++|+ |++.++-+.++.+.-
T Consensus       233 ~~G~-lyIvsE~n~~y~f~~  251 (255)
T 3qqz_A          233 ASGN-IYIVSEPNRFYRFTP  251 (255)
T ss_dssp             TTCC-EEEEETTTEEEEEEC
T ss_pred             CCCC-EEEEcCCceEEEEEe
Confidence            7787 444466666666653

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.83  E-value=1.6e-05  Score=61.37  Aligned_cols=234  Identities=8%  Similarity=-0.025  Sum_probs=129.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-C-eEEEEECCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-H-TLRLWNIKT   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g-~i~vwd~~~   88 (291)
                      .....++|++++    .++++-..++.|..||.+. +....+. .......+++.+ +++++++.... + .|..+|..+
T Consensus        32 ~~pegia~~~~g----~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~  104 (306)
T 2p4o_A           32 TFLENLASAPDG----TIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD  104 (306)
T ss_dssp             CCEEEEEECTTS----CEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred             CCcceEEECCCC----CEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC
Confidence            456788999887    4777777889999999874 4333333 345688999999 77766654432 2 476777777


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh-hhhhccccccCCCCccccccCccccCccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI-KDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ++...... . ........++..+.+..+++-..++.|..+|...++. +.......  .+.   ..             
T Consensus       105 g~~~~~~~-~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~--~~~---~~-------------  164 (306)
T 2p4o_A          105 GTVETLLT-L-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML--ARS---NS-------------  164 (306)
T ss_dssp             SCEEEEEE-C-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG--SCS---ST-------------
T ss_pred             CeEEEEEe-C-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc--ccc---cc-------------
Confidence            76543321 1 1222334555555554444444588888888765321 10000000  000   00             


Q ss_pred             ccccCcceeEEEEcCC-EEEEecCCCeEEEecCCC-CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        168 RDIHRNYVDCVRWLGD-FVLSKSCENCIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                       .........+..+++ ++++-...+.|..+++.. +...       .......+....      .++.+++|+++++..
T Consensus       165 -~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~-------~~~~~~~~~~P~------gi~vd~dG~l~va~~  230 (306)
T 2p4o_A          165 -ESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPG-------EPEIFVEQTNID------DFAFDVEGNLYGATH  230 (306)
T ss_dssp             -TCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBC-------CCEEEEESCCCS------SEEEBTTCCEEEECB
T ss_pred             -cCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCC-------ccEEEeccCCCC------CeEECCCCCEEEEeC
Confidence             001112233444565 445556678999999864 2110       001122221122      256678898877777


Q ss_pred             CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc---cCCceee
Q psy10348        246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS---KNGNVLL  290 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~g~~l~  290 (291)
                      ..+.|.+++.. ++    .............+++++|.   ||++.|.
T Consensus       231 ~~~~V~~~~~~-G~----~~~~~~~~~~~~~p~~~a~~g~~~d~~~Ly  273 (306)
T 2p4o_A          231 IYNSVVRIAPD-RS----TTIIAQAEQGVIGSTAVAFGQTEGDCTAIY  273 (306)
T ss_dssp             TTCCEEEECTT-CC----EEEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred             CCCeEEEECCC-CC----EEEEeecccccCCceEEEEecccCCCCEEE
Confidence            78899999875 32    11121222222468899999   8877664

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.77  E-value=2.1e-07  Score=72.54  Aligned_cols=177  Identities=12%  Similarity=0.011  Sum_probs=110.8

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS  107 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~  107 (291)
                      .+..++.++.|..+|.+ ++.+..+......+.++...+ ++.+++. +  +.|..+| .+++....+   ......+.+
T Consensus       149 ~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v~-t--~~l~~~d-~~g~~~~~~---~~~~~~~~~  219 (330)
T 3hxj_A          149 TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK-DGTIYFG-S--DKVYAIN-PDGTEKWNF---YAGYWTVTR  219 (330)
T ss_dssp             CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TCCEEEE-S--SSEEEEC-TTSCEEEEE---CCSSCCCSC
T ss_pred             EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC-CCEEEEE-e--CEEEEEC-CCCcEEEEE---ccCCcceec
Confidence            57777888999999998 887777765566677787776 6665554 4  7799999 777776665   344466778


Q ss_pred             EEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEE
Q psy10348        108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVL  186 (291)
Q Consensus       108 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~  186 (291)
                      +...++|. +..++.++.+..+|. +++....+..                            ....+..+... +..|.
T Consensus       220 ~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~----------------------------~~~~~~~~~~~~~g~l~  269 (330)
T 3hxj_A          220 PAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT----------------------------GKRIESSPVIGNTDTIY  269 (330)
T ss_dssp             CEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC----------------------------SSCCCSCCEECTTSCEE
T ss_pred             eEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC----------------------------CCCccccceEcCCCeEE
Confidence            88887775 555666788888874 3433322210                            11112233444 56778


Q ss_pred             EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        187 SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       187 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      .++.++.|..+|. +++.            +..+......+.  .+..++++ .|..|+.+|.+++......+
T Consensus       270 v~t~~ggl~~~d~-~g~~------------~~~~~~~~~~~~--~~~~d~~g-~l~~gt~~G~~~~~~~~~~~  326 (330)
T 3hxj_A          270 FGSYDGHLYAINP-DGTE------------KWNFETGSWIIA--TPVIDENG-TIYFGTRNGKFYALFNLEHH  326 (330)
T ss_dssp             EECTTCEEEEECT-TSCE------------EEEEECSSCCCS--CCEECTTC-CEEEECTTSCEEEEEC----
T ss_pred             EecCCCCEEEECC-CCcE------------EEEEEcCCcccc--ceEEcCCC-EEEEEcCCCeEEEEeccccc
Confidence            8888989999985 4432            233322222222  23344445 46778899999998876543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.74  E-value=4.5e-05  Score=60.89  Aligned_cols=202  Identities=7%  Similarity=-0.099  Sum_probs=120.8

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ......++|.+...   .++++-...+.|..++++.+.....+.........+++.+.++.++++-...+.|.+.++...
T Consensus       115 ~~~~~gl~~d~~~~---~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~  191 (386)
T 3v65_B          115 LENAIALDFHHRRE---LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA  191 (386)
T ss_dssp             CSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred             CCccEEEEEecCCC---eEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence            34567788887553   355555667889999987655433333223455788998756666666666788999988744


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEec-C-CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-D-HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      .....+   .........++++|.+..|+.+.. . +.|..+++...... .+.                          
T Consensus       192 ~~~~l~---~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~--------------------------  241 (386)
T 3v65_B          192 HRKVLL---WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIA--------------------------  241 (386)
T ss_dssp             SCEEEE---CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE--------------------------
T ss_pred             ceEEee---cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EEE--------------------------
Confidence            333333   233456789999998776666554 3 56777776543211 110                          


Q ss_pred             ccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        168 RDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       168 ~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                       .........++++   +.+.++-...+.|..+|+......          .+  +.........+++  + .+.++++-
T Consensus       242 -~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~----------~~--~~~~~~~P~giav--~-~~~ly~td  305 (386)
T 3v65_B          242 -DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK----------AV--ISQGLPHPFAITV--F-EDSLYWTD  305 (386)
T ss_dssp             -CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE----------EE--ECSSCSSEEEEEE--E-TTEEEEEE
T ss_pred             -ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE----------EE--EECCCCCceEEEE--E-CCEEEEee
Confidence             0012235678886   345555556788999998653221          11  1111222334444  2 25666666


Q ss_pred             cCCCcEEEEEcCCCCC
Q psy10348        245 NQSGRTYVWDLDVQDP  260 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~  260 (291)
                      ...+.|..++..+++.
T Consensus       306 ~~~~~V~~~~~~~G~~  321 (386)
T 3v65_B          306 WHTKSINSANKFTGKN  321 (386)
T ss_dssp             TTTTEEEEEETTTCCS
T ss_pred             CCCCeEEEEECCCCcc
Confidence            6788899999766654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.70  E-value=2.5e-05  Score=60.73  Aligned_cols=197  Identities=9%  Similarity=-0.017  Sum_probs=112.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--------------------eccceeEEEEecCCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--------------------HGHAINELKFHPQDFN   70 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~   70 (291)
                      ....+++|.+++    .++.++..++.|..|+..+++. ..+..                    ....+..+++.+.++.
T Consensus        19 ~~p~~i~~d~~g----~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~   93 (322)
T 2fp8_A           19 YAPNSFTFDSTN----KGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ   93 (322)
T ss_dssp             SCCCCEECCTTC----SSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred             CCceEEEEcCCC----CEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence            345678888877    4788888899999999876543 23321                    0124678999863444


Q ss_pred             EEEEeecCCeEEEEECCCcceeeeecc-ccC-CCCceEEEEEcc-CCCEEEEEec-----------------CCcEEEEe
Q psy10348         71 LLLSVSKDHTLRLWNIKTDICIAIFGG-VEG-HRDEVLSADFDL-LGTKIMSCGM-----------------DHSLKLWD  130 (291)
Q Consensus        71 ~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~-~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i~v~d  130 (291)
                       |+.+...+.|..+|..++.. ..+.. ..+ .......+++.+ +|+..++-..                 ++.|..||
T Consensus        94 -l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d  171 (322)
T 2fp8_A           94 -LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD  171 (322)
T ss_dssp             -EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred             -EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence             55555555688888775532 22210 011 123467899999 8876665432                 25577777


Q ss_pred             ccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCCCcccc
Q psy10348        131 LTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRLEDKEL  207 (291)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~  207 (291)
                      ..+++......                             .......++++  ++.|+.+ ...+.|..|++......  
T Consensus       172 ~~~~~~~~~~~-----------------------------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~--  220 (322)
T 2fp8_A          172 PSTKETTLLLK-----------------------------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG--  220 (322)
T ss_dssp             TTTTEEEEEEE-----------------------------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT--
T ss_pred             CCCCEEEEecc-----------------------------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC--
Confidence            65543211000                             11123467787  5555544 55789999998753210  


Q ss_pred             ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC----------CCcEEEEEcC
Q psy10348        208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ----------SGRTYVWDLD  256 (291)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~----------dg~i~vwd~~  256 (291)
                           ....+....   . ..  .++.+++|++.++...          .+.|..+|..
T Consensus       221 -----~~~~~~~~~---g-P~--gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~  268 (322)
T 2fp8_A          221 -----TAEVLVKIP---N-PG--NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF  268 (322)
T ss_dssp             -----CEEEEEECS---S-EE--EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred             -----ccceEEeCC---C-CC--CeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence                 001122221   1 22  3566777886666544          4667788764

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.70  E-value=8.3e-06  Score=69.91  Aligned_cols=114  Identities=11%  Similarity=0.056  Sum_probs=72.7

Q ss_pred             EEEeee-ccCCCCCEEEEecCCC-----------eEEEEccCCccee--EEEe-eeccceeEEEEecCCCcEEEEeec-C
Q psy10348         15 TCAWSM-DLESGRPLLAVAGSRA-----------VIRIFSPAFHACV--RHFY-GHGHAINELKFHPQDFNLLLSVSK-D   78 (291)
Q Consensus        15 ~~~~s~-~~~~~~~~l~~~~~dg-----------~i~vw~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~s~~~-d   78 (291)
                      ++++.+ ++    ++++.|+.++           .+.+||+.+++..  ..+. .+.....++++.. ++.+++.|+. +
T Consensus       190 ~~av~~~~g----~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~  264 (656)
T 1k3i_A          190 AAAIEPTSG----RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDA  264 (656)
T ss_dssp             EEEEETTTT----EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSST
T ss_pred             eEEEEecCC----EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCC
Confidence            455565 44    5888876542           6889999877532  2332 1233344577777 8889999884 4


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cC-----CcEEEEeccCch
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MD-----HSLKLWDLTKPE  135 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-----~~i~v~d~~~~~  135 (291)
                      ..+.+||..+++....- .+..... -.+++..++++.++.|+ .+     ..+.+||..+.+
T Consensus       265 ~~v~~yd~~t~~W~~~~-~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          265 KKTSLYDSSSDSWIPGP-DMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  325 (656)
T ss_dssp             TCEEEEEGGGTEEEECC-CCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             CceEEecCcCCceeECC-CCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence            57999999877544321 1122111 23455667899989888 34     568999997754

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.70  E-value=4.2e-06  Score=72.84  Aligned_cols=113  Identities=13%  Similarity=0.067  Sum_probs=74.2

Q ss_pred             eeEEEEee-eccCCCCCEEEEecC-C----CeEEEEccCCc-ceeE-EEeeeccceeEEEEecCCCcEEEEeecC-----
Q psy10348         12 NFYTCAWS-MDLESGRPLLAVAGS-R----AVIRIFSPAFH-ACVR-HFYGHGHAINELKFHPQDFNLLLSVSKD-----   78 (291)
Q Consensus        12 ~i~~~~~s-~~~~~~~~~l~~~~~-d----g~i~vw~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----   78 (291)
                      .+...+|| ||+.    +||.+.. +    ..|+++|+.++ +.+. .+.   .....+.|+| +++.|+....|     
T Consensus       175 ~~~~~~~S~PDG~----~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~~  246 (751)
T 2xe4_A          175 DVMEVKPAPPEHD----LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGP-DHTSLFYVTKDETLRE  246 (751)
T ss_dssp             EEEEEEECTTTTC----EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECS-STTEEEEEEECTTCCE
T ss_pred             EEeeeEecCCCCC----EEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEec-CCCEEEEEEECCCCCC
Confidence            56788999 9984    7765432 2    35999999988 6432 122   2245789999 77666665554     


Q ss_pred             CeEEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCc
Q psy10348         79 HTLRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKP  134 (291)
Q Consensus        79 g~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~  134 (291)
                      ..|.++++.++..  ...+.  .........+.|+|+|++|+..+.   ...|.++|+.++
T Consensus       247 ~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          247 NKVWRHVMGKLQSEDVCLYE--EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             EEEEEEETTSCGGGCEEEEE--CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             CEEEEEECCCCchhcEEEEe--cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            3588888877642  22331  123345678899999998876653   345778888765

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.64  E-value=5.9e-05  Score=56.83  Aligned_cols=186  Identities=10%  Similarity=-0.046  Sum_probs=107.2

Q ss_pred             CEEEEecCCCeEEEEccCCcce-----eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCC
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHAC-----VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH  101 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~  101 (291)
                      ++|+.+.. +.|+.++++....     ...+......+..++|++.++.++++-..++.|..+++..+.....+   ...
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---~~~   77 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII---RQD   77 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE---CTT
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE---ECC
Confidence            35555543 5788898875432     11233334567899999844556666666789999998765443333   222


Q ss_pred             CCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEE
Q psy10348        102 RDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW  180 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  180 (291)
                      ......+++++++..|+.+. ..+.|.++++..... ..+.                           .........+++
T Consensus        78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~---------------------------~~~~~~P~~i~v  129 (267)
T 1npe_A           78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLF---------------------------DTGLVNPRGIVT  129 (267)
T ss_dssp             CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE---------------------------CSSCSSEEEEEE
T ss_pred             CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEE---------------------------ECCCCCccEEEE
Confidence            35678999999766665554 467899998764321 1110                           001123467777


Q ss_pred             c--CCEEEEecC---CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEE
Q psy10348        181 L--GDFVLSKSC---ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWD  254 (291)
Q Consensus       181 ~--~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd  254 (291)
                      +  +..|+.+..   .+.|..+++.....          ..+..  .......  .+++++++..|+.+ ...+.|.++|
T Consensus       130 d~~~g~lyv~~~~~~~~~I~~~~~dg~~~----------~~~~~--~~~~~P~--gia~d~~~~~lyv~d~~~~~I~~~~  195 (267)
T 1npe_A          130 DPVRGNLYWTDWNRDNPKIETSHMDGTNR----------RILAQ--DNLGLPN--GLTFDAFSSQLCWVDAGTHRAECLN  195 (267)
T ss_dssp             ETTTTEEEEEECCSSSCEEEEEETTSCCC----------EEEEC--TTCSCEE--EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             eeCCCEEEEEECCCCCcEEEEEecCCCCc----------EEEEE--CCCCCCc--EEEEcCCCCEEEEEECCCCEEEEEe
Confidence            6  445544443   36888887754321          11111  1111222  34556766666544 4668999999


Q ss_pred             cCCC
Q psy10348        255 LDVQ  258 (291)
Q Consensus       255 ~~~~  258 (291)
                      +...
T Consensus       196 ~~g~  199 (267)
T 1npe_A          196 PAQP  199 (267)
T ss_dssp             TTEE
T ss_pred             cCCC
Confidence            8754

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.62  E-value=2.1e-05  Score=67.49  Aligned_cols=110  Identities=12%  Similarity=0.193  Sum_probs=76.7

Q ss_pred             EEEEecC------CCeEEEEccCCcceeEEEeeec-------------------------------cceeEEEEecCCCc
Q psy10348         28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHG-------------------------------HAINELKFHPQDFN   70 (291)
Q Consensus        28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~   70 (291)
                      .++++..      +|.|+.+|.++|+.+..+....                               .....+++.| +..
T Consensus       164 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~  242 (668)
T 1kv9_A          164 KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELD  242 (668)
T ss_dssp             EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTT
T ss_pred             EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCC
Confidence            5555543      5899999999999988775210                               0112467888 667


Q ss_pred             EEEEeecCC-------------------eEEEEECCCcceeeeeccccCCC-------CceEEEEEccCCC---EEEEEe
Q psy10348         71 LLLSVSKDH-------------------TLRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLGT---KIMSCG  121 (291)
Q Consensus        71 ~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~l~~~~  121 (291)
                      +++.+..++                   .|..+|.++|+.+..+.. ..|.       .+.....+..+|+   .++.++
T Consensus       243 ~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~-~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~  321 (668)
T 1kv9_A          243 LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV-TPGDSWDFTATQQITLAELNIDGKPRKVLMQAP  321 (668)
T ss_dssp             EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECC
T ss_pred             EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec-CCCccccccCCCCcEEEEeccCCcEEEEEEEEC
Confidence            787777665                   399999999999887742 1122       2333333334665   688999


Q ss_pred             cCCcEEEEeccCchhhhh
Q psy10348        122 MDHSLKLWDLTKPEIKDA  139 (291)
Q Consensus       122 ~d~~i~v~d~~~~~~~~~  139 (291)
                      .+|.++++|..+++.+..
T Consensus       322 ~~G~l~~lD~~tG~~l~~  339 (668)
T 1kv9_A          322 KNGFFYVLDRTNGKLISA  339 (668)
T ss_dssp             TTSEEEEEETTTCCEEEE
T ss_pred             CCCEEEEEECCCCCEecc
Confidence            999999999999987743

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.59  E-value=0.00011  Score=57.67  Aligned_cols=201  Identities=8%  Similarity=-0.083  Sum_probs=119.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      .....++|.+...   .++++-...+.|..++++.+.....+.........+++.+.++.++++-...+.|.+.++....
T Consensus        73 ~~~~~l~~d~~~~---~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~  149 (349)
T 3v64_C           73 ENAIALDFHHRRE---LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH  149 (349)
T ss_dssp             SCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CceEEEEEecccc---EEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence            4467888887653   3555555678899999876554333332234567899987566666776677899999987443


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEec-C-CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-D-HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ....+   .........++++|.+..|+.+.. . +.|..+++...... .+.                           
T Consensus       150 ~~~l~---~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~---------------------------  198 (349)
T 3v64_C          150 RKVLL---WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIA---------------------------  198 (349)
T ss_dssp             CEEEE---CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ESC---------------------------
T ss_pred             eEEEE---eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EEE---------------------------
Confidence            33333   233456789999997766665543 3 67777776543211 110                           


Q ss_pred             cccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        169 DIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                      ...-.....++++  ++ +.++-...+.|..+|+......          .+  +.........+++  + ++.++++-.
T Consensus       199 ~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~----------~~--~~~~~~~P~giav--~-~~~ly~td~  263 (349)
T 3v64_C          199 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK----------AV--ISQGLPHPFAITV--F-EDSLYWTDW  263 (349)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------EE--ECSSCSSEEEEEE--E-TTEEEEEET
T ss_pred             ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE----------EE--EeCCCCCceEEEE--E-CCEEEEecC
Confidence            0012235678886  44 4445555788999998653221          11  1111222334444  2 255666666


Q ss_pred             CCCcEEEEEcCCCCC
Q psy10348        246 QSGRTYVWDLDVQDP  260 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~  260 (291)
                      ..+.|..++..+++.
T Consensus       264 ~~~~V~~~~~~~G~~  278 (349)
T 3v64_C          264 HTKSINSANKFTGKN  278 (349)
T ss_dssp             TTTEEEEEETTTCCS
T ss_pred             CCCeEEEEEccCCCc
Confidence            788899998766654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.56  E-value=3.2e-05  Score=65.03  Aligned_cols=110  Identities=15%  Similarity=0.136  Sum_probs=72.2

Q ss_pred             EEEEecC------CCeEEEEccCCcceeEEEeeeccc--------------------------------------eeEEE
Q psy10348         28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHGHA--------------------------------------INELK   63 (291)
Q Consensus        28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~--------------------------------------v~~~~   63 (291)
                      .+++++.      +|.|+.+|.++|+.+..+......                                      ...++
T Consensus       162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a  241 (571)
T 2ad6_A          162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA  241 (571)
T ss_dssp             EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred             EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence            5555554      789999999999998877632111                                      01356


Q ss_pred             EecCCCcEEEEeecC----------------CeEEEEECCCcceeeeeccccCC--------CCceEEEEEccCCC---E
Q psy10348         64 FHPQDFNLLLSVSKD----------------HTLRLWNIKTDICIAIFGGVEGH--------RDEVLSADFDLLGT---K  116 (291)
Q Consensus        64 ~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~---~  116 (291)
                      +.+ +...++.+..+                +.|..+|.++|+.+..++. ..|        ..++. +....+|+   .
T Consensus       242 ~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~-~~~d~~d~~~~~~p~l-~~~~~~G~~~~~  318 (571)
T 2ad6_A          242 YDP-KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK-TPHDEWDFAGVNQMVL-TDQPVNGKMTPL  318 (571)
T ss_dssp             EET-TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES-STTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred             EcC-CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC-CCCcccccccCCCCEE-EecccCCcEEEE
Confidence            666 44455555432                3699999999998887642 112        12222 22234674   5


Q ss_pred             EEEEecCCcEEEEeccCchhhhhh
Q psy10348        117 IMSCGMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus       117 l~~~~~d~~i~v~d~~~~~~~~~~  140 (291)
                      ++.++.+|.+.++|..+++.+...
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~  342 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAE  342 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEE
T ss_pred             EEEeCCCcEEEEEECCCCCEEeee
Confidence            778888999999999999876554

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.56  E-value=0.00031  Score=61.65  Aligned_cols=238  Identities=13%  Similarity=0.097  Sum_probs=137.8

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-------eccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-------HGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ...|.++...+++     .+..|+.++-+.+||..+++.......       ....|.++...+ ++.+.+ |+.+| |.
T Consensus       214 ~~~i~~i~~d~~g-----~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~G-l~  285 (795)
T 4a2l_A          214 TKQIQAILQQSPT-----RIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWI-GTFND-LN  285 (795)
T ss_dssp             CCCEEEEEEEETT-----EEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEE-EESSC-EE
T ss_pred             CCeeEEEEEcCCC-----CEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEE-EeCCh-hh
Confidence            4567777777666     566666555588999876654322211       135688998887 666544 44554 88


Q ss_pred             EEECCCcceeeeecc----ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         83 LWNIKTDICIAIFGG----VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        83 vwd~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      +||..+++.......    ..-....|.++...++|. |-.|+.++-|..|+..+..... +.    ..+..        
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~----~~~~~--------  351 (795)
T 4a2l_A          286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKN-IR----NIPYK--------  351 (795)
T ss_dssp             EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEE-EC----CCTTS--------
T ss_pred             eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceE-Ec----CCCCC--------
Confidence            999876654332210    011346799999998886 4556667779999876543211 10    00000        


Q ss_pred             cccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDY  236 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~  236 (291)
                               .......|.++..+ ...|..|+.++-|..||..+...........     ..- ......|..  +..++
T Consensus       352 ---------~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~v~~--i~~d~  415 (795)
T 4a2l_A          352 ---------NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQED-----ESARGIGSNNIKA--VYVDE  415 (795)
T ss_dssp             ---------SSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-----------CCSCSCEEE--EEEET
T ss_pred             ---------CCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCC-----CcccCCCCccEEE--EEEcC
Confidence                     00134558888887 4466778888889999987653211100000     000 011233444  44556


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec---cccccceeeeEEccCCceee
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH---PRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++.|.+|+.++-|..||..+++.     ..+..   ......|.++...++|++.+
T Consensus       416 ~g~~lWigt~~~Gl~~~d~~~~~~-----~~~~~~~~~l~~~~v~~i~~d~~g~lwi  467 (795)
T 4a2l_A          416 KKSLVYIGTHAGGLSILHRNSGQV-----ENFNQRNSQLVNENVYAILPDGEGNLWL  467 (795)
T ss_dssp             TTTEEEEEETTTEEEEEETTTCCE-----EEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred             CCCEEEEEeCcCceeEEeCCCCcE-----EEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence            677677788777799999887642     12211   01235688888888887654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.55  E-value=2.5e-05  Score=65.74  Aligned_cols=61  Identities=10%  Similarity=0.039  Sum_probs=42.9

Q ss_pred             CeEEEEECCCcceeeeeccccCCC--------CceEEEEEc-cCCC---EEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHR--------DEVLSADFD-LLGT---KIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      +.|..+|..+|+.+..++. ..|.        .++. +... .+|+   .++.++.+|.++++|.++++.+....
T Consensus       291 ~~v~AlD~~TG~~~W~~q~-~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~  363 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQH-TPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP  363 (582)
T ss_dssp             SEEEEECTTTCCEEEEEES-STTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ceEEEEeCCCCCEEEEEeC-CCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence            6899999999999887742 1222        2222 2222 4664   78889999999999999998875543

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.54  E-value=3.8e-06  Score=72.00  Aligned_cols=75  Identities=17%  Similarity=0.198  Sum_probs=54.1

Q ss_pred             EEEeeeccCCCCCEEEEecCCC-------------------eEEEEccCCcceeEEEee--ec-------cceeEEEEec
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRA-------------------VIRIFSPAFHACVRHFYG--HG-------HAINELKFHP   66 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg-------------------~i~vw~~~~~~~~~~~~~--~~-------~~v~~~~~~~   66 (291)
                      .+++.|+.    .+++.+..++                   .|..+|.++|+.+..++.  |.       .+.....+..
T Consensus       234 ~~a~d~~~----~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~  309 (668)
T 1kv9_A          234 SMAYDPEL----DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI  309 (668)
T ss_dssp             CEEEETTT----TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred             ceEEcCCC----CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc
Confidence            45677665    4888887766                   499999999999888864  21       2223233333


Q ss_pred             CCCc---EEEEeecCCeEEEEECCCcceeee
Q psy10348         67 QDFN---LLLSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        67 ~~~~---~l~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                       +++   .++.++.+|.+.++|..+|+.+..
T Consensus       310 -~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~  339 (668)
T 1kv9_A          310 -DGKPRKVLMQAPKNGFFYVLDRTNGKLISA  339 (668)
T ss_dssp             -TTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred             -CCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence             444   688999999999999999988744

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.53  E-value=0.00015  Score=56.10  Aligned_cols=203  Identities=8%  Similarity=-0.092  Sum_probs=116.8

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---cceeEE-EeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---HACVRH-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ....+++|.+...   .++++-...+.|..+++..   +..... +...-.....+++.+.++.+.++-..++.|.+.++
T Consensus        30 ~~p~g~~~d~~~~---~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~  106 (316)
T 1ijq_A           30 RNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  106 (316)
T ss_dssp             SSEEEEEEETTTT---EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CceEEEEEEeCCC---EEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence            4566888887653   3555556678999999875   122222 32222456789998745566666667789999998


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC--CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD--HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ........+   .........++++|.+..|+.+...  +.|..+++.... ...+.                       
T Consensus       107 ~g~~~~~~~---~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~-----------------------  159 (316)
T 1ijq_A          107 KGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV-----------------------  159 (316)
T ss_dssp             TSSSEEEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEE-----------------------
T ss_pred             CCCceEEEE---ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEE-----------------------
Confidence            744333332   2233567899999977766665543  577777765322 11110                       


Q ss_pred             cccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                          ...-.....++++  ++.| ++-...+.|..+|+.....          +.+............+++  + .+.++
T Consensus       160 ----~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~----------~~~~~~~~~~~~P~giav--~-~~~ly  222 (316)
T 1ijq_A          160 ----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHPFSLAV--F-EDKVF  222 (316)
T ss_dssp             ----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEECTTTTSSEEEEEE--E-TTEEE
T ss_pred             ----ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce----------EEEeecCCccCCcEEEEE--E-CCEEE
Confidence                0012235678887  4444 4555577999999864322          112221111122233444  3 25566


Q ss_pred             EEEcCCCcEEEEEcCCCCC
Q psy10348        242 AVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~  260 (291)
                      ++-...+.|..++..+++.
T Consensus       223 ~~d~~~~~V~~~~~~~g~~  241 (316)
T 1ijq_A          223 WTDIINEAIFSANRLTGSD  241 (316)
T ss_dssp             EEETTTTEEEEEETTTCCC
T ss_pred             EEECCCCeEEEEeCCCCcc
Confidence            6666778899999876654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.52  E-value=9.3e-05  Score=57.26  Aligned_cols=189  Identities=12%  Similarity=0.132  Sum_probs=115.5

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC----c---EEEEeec---CCeEEEEECC--Ccceeee
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF----N---LLLSVSK---DHTLRLWNIK--TDICIAI   94 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~---~l~s~~~---dg~i~vwd~~--~~~~~~~   94 (291)
                      .+++.....+-+.+||+ +|+.++.+..  +.++.+..-| +-    .   ++++...   +.+|.+|++.  ++ .+..
T Consensus        41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~  115 (355)
T 3amr_A           41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQS  115 (355)
T ss_dssp             CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEE
T ss_pred             cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceee
Confidence            45666667789999999 7998888863  5667777766 32    1   3333333   5789999773  33 3444


Q ss_pred             eccc--c-CCC-CceEEEEE--ccC-CC-EEEEEecCCcEEEEeccC-------chhhhhhccccccCCCCccccccCcc
Q psy10348         95 FGGV--E-GHR-DEVLSADF--DLL-GT-KIMSCGMDHSLKLWDLTK-------PEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        95 ~~~~--~-~~~-~~i~~~~~--~~~-~~-~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      +...  . ... ..+..+++  +|. +. ++++...+|.+..|++..       .+.++++.                  
T Consensus       116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~------------------  177 (355)
T 3amr_A          116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK------------------  177 (355)
T ss_dssp             CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE------------------
T ss_pred             ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec------------------
Confidence            4110  0 011 55667777  775 43 688888899999999842       22233322                  


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--CcccEEEEEEEec
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--KDCEIWFIRFSMD  235 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~  235 (291)
                                 -...+..+..+  ...|+.+-++.-|..++.+.....       ..+.+..+..  -...+..+.+-..
T Consensus       178 -----------lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~-------~~~~v~~~~~g~l~aDvEGLai~~~  239 (355)
T 3amr_A          178 -----------MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGS-------NGTVIDRADGRHLTRDIEGLTIYYA  239 (355)
T ss_dssp             -----------CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCS-------CCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred             -----------CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCC-------CceEEEEecCCccccCcceEEEEec
Confidence                       12346666666  568888988877777775422100       0022433321  1235677777666


Q ss_pred             CCCc-EEEEEc-CCCcEEEEEcC
Q psy10348        236 YWQK-ILAVGN-QSGRTYVWDLD  256 (291)
Q Consensus       236 ~~~~-~l~~~~-~dg~i~vwd~~  256 (291)
                      ++++ ||++++ .++++.+||..
T Consensus       240 ~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          240 ADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             GGGCEEEEEEEGGGTEEEEEESS
T ss_pred             CCCCEEEEEEcCCCCEEEEEECC
Confidence            6666 666665 67799999997

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.48  E-value=0.00038  Score=61.16  Aligned_cols=234  Identities=8%  Similarity=-0.028  Sum_probs=133.5

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--------eccceeEEEEecCCCcEEEEeecCCeE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--------HGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ...|.++...+++     .|..|+.++-|..|+..+++.......        ....|.++...+ ++.+|..|+.++-|
T Consensus       356 ~~~V~~i~~d~~g-----~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl  429 (795)
T 4a2l_A          356 DNVVSCIVEDKDK-----NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGL  429 (795)
T ss_dssp             CSSEEEEEECTTS-----CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEE
T ss_pred             CCeeEEEEECCCC-----CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCce
Confidence            3568888877766     577788887899999887654332211        135688998887 77746667777779


Q ss_pred             EEEECCCcceeeeecc-ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348         82 RLWNIKTDICIAIFGG-VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE  160 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (291)
                      .++|..+++....... .......|.++...++|.+.+.. . +-+.+||..+++.......   ..+            
T Consensus       430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~---~~~------------  492 (795)
T 4a2l_A          430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKE---KDG------------  492 (795)
T ss_dssp             EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBC---TTC------------
T ss_pred             eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEcccc---ccc------------
Confidence            9999887764332210 01234679999988888755544 4 4588899876543211000   000            


Q ss_pred             cCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                             .......|.++..+ ...+..|+. +-|..||..+... ......      ..-......+  .++..+++|.
T Consensus       493 -------~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~-~~~~~~------~~~~l~~~~i--~~i~~d~~g~  555 (795)
T 4a2l_A          493 -------TPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI-QKASIL------PVSNVTKLFT--NCIYEASNGI  555 (795)
T ss_dssp             -------CBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE-EECCCS------CSCGGGGSCE--EEEEECTTSC
T ss_pred             -------cccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE-EEecCC------CCCCCCCCee--EEEEECCCCC
Confidence                   00133568888877 334444555 5577888755421 000000      0000112233  3455667677


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEec-cc-cccceeeeEEccCCceee
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSH-PR-CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~  290 (291)
                      +.+.. .. -|..||..+.+    . ..+.. .+ ....|.++...++|++.+
T Consensus       556 lWigT-~~-Gl~~~d~~~~~----~-~~~~~~~gl~~~~i~~i~~d~~g~lWi  601 (795)
T 4a2l_A          556 IWVGT-RE-GFYCFNEKDKQ----I-KRYNTTNGLPNNVVYGILEDSFGRLWL  601 (795)
T ss_dssp             EEEEE-SS-CEEEEETTTTE----E-EEECGGGTCSCSCEEEEEECTTSCEEE
T ss_pred             EEEEe-CC-CceeECCCCCc----E-EEeCCCCCCchhheEEEEECCCCCEEE
Confidence            55544 34 48888877652    1 22211 11 124578888888887654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.44  E-value=0.00035  Score=55.97  Aligned_cols=205  Identities=9%  Similarity=-0.092  Sum_probs=119.6

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ...+..++|.+...   .++.+-...+.|+.+++...    .....+.........+++.+..+.+.++-...+.|.+.+
T Consensus       111 ~~~~~~l~~d~~~~---~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~  187 (400)
T 3p5b_L          111 LRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD  187 (400)
T ss_dssp             CSCEEEEEEETTTT---EEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred             cCcceEEeeeeccC---ceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence            45677888887653   35555556788988888642    222233323345678899874566666666778999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ++.......+   .........++++|.+.+|+.+..  .+.|...++..........                      
T Consensus       188 ~~g~~~~~l~---~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~----------------------  242 (400)
T 3p5b_L          188 TKGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT----------------------  242 (400)
T ss_dssp             TTTCSEEEEE---ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC----------------------
T ss_pred             CCCCceEEEE---eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE----------------------
Confidence            8755443333   233455789999997777766653  3678888776433211100                      


Q ss_pred             ccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                            ..-.....|+++  ++.| ++-...+.|..+|+.....          ..+......-.....+++  . .+.+
T Consensus       243 ------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~----------~~~~~~~~~l~~P~gl~v--~-~~~l  303 (400)
T 3p5b_L          243 ------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHPFSLAV--F-EDKV  303 (400)
T ss_dssp             ------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC----------EEEEECSSTTSSEEEEEE--E-TTEE
T ss_pred             ------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc----------EEEEeCCCCCCCCEEEEE--e-CCEE
Confidence                  012345678887  4444 4445578899999865432          112211111112223333  2 2455


Q ss_pred             EEEEcCCCcEEEEEcCCCCCC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      +.+-...+.|..+|..+++..
T Consensus       304 ywtd~~~~~V~~~~~~~G~~~  324 (400)
T 3p5b_L          304 FWTDIINEAIFSANRLTGSDV  324 (400)
T ss_dssp             EEEESSSCSEEEEESSSCCCC
T ss_pred             EEecCCCCeEEEEEcCCCCce
Confidence            666667788999997777543

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.43  E-value=9.4e-05  Score=62.35  Aligned_cols=110  Identities=14%  Similarity=0.082  Sum_probs=73.9

Q ss_pred             EEEEec------CCCeEEEEccCCcceeEEEeeeccce--------------------------------------eEEE
Q psy10348         28 LLAVAG------SRAVIRIFSPAFHACVRHFYGHGHAI--------------------------------------NELK   63 (291)
Q Consensus        28 ~l~~~~------~dg~i~vw~~~~~~~~~~~~~~~~~v--------------------------------------~~~~   63 (291)
                      .+++++      .+|.|+-+|.++|+.+..+.......                                      ..++
T Consensus       168 ~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a  247 (599)
T 1w6s_A          168 KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYA  247 (599)
T ss_dssp             EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred             EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCcccccee
Confidence            555555      37999999999999988776321110                                      1345


Q ss_pred             EecCCCcEEEEeecC----------------CeEEEEECCCcceeeeeccccCCC--------CceEEEEEc-cCC---C
Q psy10348         64 FHPQDFNLLLSVSKD----------------HTLRLWNIKTDICIAIFGGVEGHR--------DEVLSADFD-LLG---T  115 (291)
Q Consensus        64 ~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~---~  115 (291)
                      +.+ ...+++.+..+                +.|..+|.++|+.+..++. ..|.        .++. +... .+|   .
T Consensus       248 ~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~-~~~d~wd~d~~~~p~l-~d~~~~~G~~~~  324 (599)
T 1w6s_A          248 YDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK-TPHDEWDYAGVNVMML-SEQKDKDGKARK  324 (599)
T ss_dssp             EET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES-STTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred             EeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec-CCCccccccCCCccEE-EeccccCCcEEE
Confidence            666 45566666554                3799999999999887742 2221        2222 2222 467   4


Q ss_pred             EEEEEecCCcEEEEeccCchhhhhh
Q psy10348        116 KIMSCGMDHSLKLWDLTKPEIKDAC  140 (291)
Q Consensus       116 ~l~~~~~d~~i~v~d~~~~~~~~~~  140 (291)
                      .++.++.+|.+.++|.++++.+...
T Consensus       325 ~v~~~~~~G~l~~lD~~tG~~lw~~  349 (599)
T 1w6s_A          325 LLTHPDRNGIVYTLDRTDGALVSAN  349 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             EEEEECCCcEEEEEECCCCCEeecc
Confidence            6777889999999999999877554

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.41  E-value=0.00024  Score=52.79  Aligned_cols=203  Identities=13%  Similarity=0.110  Sum_probs=116.6

Q ss_pred             eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348         54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK  133 (291)
Q Consensus        54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~  133 (291)
                      +-.+.+..++|+|+++.++++...++.|...|.. ++.+..+.  ..-......+++.+++.++++.-.++.+.++++..
T Consensus        24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~--l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~  100 (255)
T 3qqz_A           24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP--LDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP  100 (255)
T ss_dssp             TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE--CSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred             CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe--cCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence            4446799999999555667778888999999998 77777662  12235678899998887766665678899998876


Q ss_pred             chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348        134 PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      ...+..... ..+                + +. ....+.....++|+  ++.|+++.......+|.+.....    .  
T Consensus       101 ~~~i~~~~~-~~~----------------~-~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~----~--  155 (255)
T 3qqz_A          101 NSEVKILKK-IKI----------------P-LQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS----S--  155 (255)
T ss_dssp             TCCEEEEEE-EEC----------------C-CS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC----S--
T ss_pred             CCeeeeeee-ecc----------------c-cc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc----C--
Confidence            542111110 000                0 00 01134457889998  54666666554445554431100    0  


Q ss_pred             Cceeeeee--e--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-cc------ccceeee
Q psy10348        212 TNVTIINR--L--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-RC------MSAVRQT  280 (291)
Q Consensus       212 ~~~~~~~~--~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~------~~~v~~~  280 (291)
                      .....+..  +  .........+.+.+. .+++++.......+.++|....     ....+... +.      -...-.|
T Consensus       156 ~~l~i~~~~~~~~~~~~~d~S~l~~dp~-tg~lliLS~~s~~L~~~d~~g~-----~~~~~~L~~g~~~l~~~~~qpEGi  229 (255)
T 3qqz_A          156 NELHISKDKALQRQFTLDDVSGAEFNQQ-KNTLLVLSHESRALQEVTLVGE-----VIGEMSLTKGSRGLSHNIKQAEGV  229 (255)
T ss_dssp             SCCEEEECHHHHHTCCSSCCCEEEEETT-TTEEEEEETTTTEEEEECTTCC-----EEEEEECSTTGGGCSSCCCSEEEE
T ss_pred             CceeeecchhhccccccCCceeEEEcCC-CCeEEEEECCCCeEEEEcCCCC-----EEEEEEcCCccCCcccccCCCCee
Confidence            00011100  0  011122334445442 3667777778888999987653     12333322 11      1256789


Q ss_pred             EEccCCceee
Q psy10348        281 TLSKNGNVLL  290 (291)
Q Consensus       281 ~~s~~g~~l~  290 (291)
                      +|.++|+..+
T Consensus       230 a~d~~G~lyI  239 (255)
T 3qqz_A          230 AMDASGNIYI  239 (255)
T ss_dssp             EECTTCCEEE
T ss_pred             EECCCCCEEE
Confidence            9999998654

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.39  E-value=8.5e-05  Score=62.62  Aligned_cols=111  Identities=10%  Similarity=0.005  Sum_probs=72.1

Q ss_pred             CEEEEecC-CCeEEEEcc-CCcceeEEEeeeccc-----------eeEEEEecCCCcE----EEEeecCCeEEEEECCCc
Q psy10348         27 PLLAVAGS-RAVIRIFSP-AFHACVRHFYGHGHA-----------INELKFHPQDFNL----LLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        27 ~~l~~~~~-dg~i~vw~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~----l~s~~~dg~i~vwd~~~~   89 (291)
                      ..+++++. ++.|.-+|. ++|+.+.++......           ...+++.| .+..    ++.++.|+.|..+|.++|
T Consensus        63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEcCCCEEEEEECCCC
Confidence            36777777 899999999 899998877633211           12345544 2333    777888999999999999


Q ss_pred             ceeeeeccccCCC--CceEE-EEEccCCCEEEEEe------cCCcEEEEeccCchhhhhhc
Q psy10348         90 ICIAIFGGVEGHR--DEVLS-ADFDLLGTKIMSCG------MDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        90 ~~~~~~~~~~~~~--~~i~~-~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~  141 (291)
                      +.+..... ..+.  ..+.+ -.. .++ .+++++      .++.|+.+|.++++.+..+.
T Consensus       142 ~~~W~~~~-~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~  199 (599)
T 1w6s_A          142 ETVWKVEN-SDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY  199 (599)
T ss_dssp             CEEEEEEC-CCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             CEEEeecC-CCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence            98876531 1110  01111 011 133 555554      38999999999999776554

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.34  E-value=0.00019  Score=62.85  Aligned_cols=227  Identities=11%  Similarity=-0.013  Sum_probs=129.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE---eeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF---YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ...|.++...+++     .|..|+.++-|..|+..+++.....   ......|.++...+ ++.+.+ |+.++-+..+|.
T Consensus       362 ~~~v~~i~~d~~g-----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gt~~~Gl~~~~~  434 (781)
T 3v9f_A          362 NKVVSSVCDDGQG-----KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLWF-GTYLGNISYYNT  434 (781)
T ss_dssp             SSCEEEEEECTTS-----CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSCEEE-EETTEEEEEECS
T ss_pred             CcceEEEEEcCCC-----CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCCEEE-EeccCCEEEEcC
Confidence            3567888777666     5667776677899998755432211   12235788888876 655544 666667899998


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      .+++...... .......|.++...+++.+.+ |+. +-+..+|..+++.......     +.                 
T Consensus       435 ~~~~~~~~~~-~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~-----~~-----------------  489 (781)
T 3v9f_A          435 RLKKFQIIEL-EKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDT-----SN-----------------  489 (781)
T ss_dssp             SSCEEEECCS-TTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECT-----TT-----------------
T ss_pred             CCCcEEEecc-CCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccC-----cc-----------------
Confidence            7665433210 012346799998888776444 454 5588899876553211000     00                 


Q ss_pred             cccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC----CcccEEEEEEEecCCCcEE
Q psy10348        167 TRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF----KDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~l  241 (291)
                       .......|.++..+ ...|..|+.++-|..||..+.+.             ..+..    ....|  .++..+++|.+.
T Consensus       490 -~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-------------~~~~~~~~l~~~~i--~~i~~d~~g~lW  553 (781)
T 3v9f_A          490 -SQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-------------RKFNQYEGFCSNTI--NQIYRSSKGQMW  553 (781)
T ss_dssp             -SSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-------------EEECTTTTCSCSCE--EEEEECTTSCEE
T ss_pred             -cccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-------------EEccCCCCCCCCee--EEEEECCCCCEE
Confidence             00123557888777 44555566645577788765432             22211    12233  345566667655


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEec-cc-cccceeeeEEccCCceee
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSH-PR-CMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~  290 (291)
                      ++. .+|.|..||..+++.     ..+.. .+ ....|.++...++|++.+
T Consensus       554 i~T-~~Glv~~~d~~~~~~-----~~~~~~~gl~~~~i~~i~~d~~g~lW~  598 (781)
T 3v9f_A          554 LAT-GEGLVCFPSARNFDY-----QVFQRKEGLPNTHIRAISEDKNGNIWA  598 (781)
T ss_dssp             EEE-TTEEEEESCTTTCCC-----EEECGGGTCSCCCCCEEEECSSSCEEE
T ss_pred             EEE-CCCceEEECCCCCcE-----EEccccCCCCCceEEEEEECCCCCEEE
Confidence            544 477658888876532     22221 11 123577788888877654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.33  E-value=0.00059  Score=53.60  Aligned_cols=196  Identities=12%  Similarity=-0.022  Sum_probs=111.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      +...|.+..++     .+|+.+. ...|+..++........+.. ......++|.+.++.++++-...+.|..+++..+.
T Consensus        34 d~~~C~~~~~~-----~~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~  106 (349)
T 3v64_C           34 DRRSCKALGPE-----PVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSN  106 (349)
T ss_dssp             TSSCEEESSSC-----CEEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CCCcccccccC-----ceeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence            34455555553     3555543 35688888876554443433 34578999998566666666677899999988655


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ....+   .........+++.+.+..|+. -...+.|.+.++........+.                            
T Consensus       107 ~~~~~---~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----------------------------  155 (349)
T 3v64_C          107 VEEVV---STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----------------------------  155 (349)
T ss_dssp             CEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------------
T ss_pred             ceEEE---eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe----------------------------
Confidence            43333   222344568888876655544 4456789998876543111100                            


Q ss_pred             ccCcceeEEEEc--CC-EEEEecCC-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-
Q psy10348        170 IHRNYVDCVRWL--GD-FVLSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-  244 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~-~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-  244 (291)
                      ........++++  +. ++++-... +.|..+++......          .+  ....-....  .++++|++..|+.+ 
T Consensus       156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~----------~~--~~~~~~~Pn--Gla~d~~~~~lY~aD  221 (349)
T 3v64_C          156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR----------II--ADTHLFWPN--GLTIDYAGRRMYWVD  221 (349)
T ss_dssp             TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE----------ES--CCSSCSCEE--EEEEETTTTEEEEEE
T ss_pred             CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE----------EE--EECCCCCcc--eEEEeCCCCEEEEEE
Confidence            012234667776  33 44444444 78888887653221          11  111111122  34555546655554 


Q ss_pred             cCCCcEEEEEcCCC
Q psy10348        245 NQSGRTYVWDLDVQ  258 (291)
Q Consensus       245 ~~dg~i~vwd~~~~  258 (291)
                      +..+.|..+++...
T Consensus       222 ~~~~~I~~~~~dG~  235 (349)
T 3v64_C          222 AKHHVIERANLDGS  235 (349)
T ss_dssp             TTTTEEEEEETTSC
T ss_pred             CCCCEEEEEeCCCC
Confidence            46678999998754

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.31  E-value=0.00058  Score=52.94  Aligned_cols=113  Identities=7%  Similarity=0.034  Sum_probs=70.3

Q ss_pred             eeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEeec--------
Q psy10348         12 NFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVSK--------   77 (291)
Q Consensus        12 ~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~--------   77 (291)
                      ....+++.+ ++     .|+++...+.|..+|..+++. ..+..     .......+++.+.++.+.++-..        
T Consensus        81 ~p~gi~~~~~~g-----~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~  154 (322)
T 2fp8_A           81 RTYDISYNLQNN-----QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV  154 (322)
T ss_dssp             CEEEEEEETTTT-----EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred             CCceEEEcCCCC-----cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence            467888887 55     455554445588888775543 22321     11246778888734555555322        


Q ss_pred             ---------CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCc
Q psy10348         78 ---------DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKP  134 (291)
Q Consensus        78 ---------dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~  134 (291)
                               ++.|..+|..+++.....    ........++++|+++.|+.+ ...+.|.+|++...
T Consensus       155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~----~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~  217 (322)
T 2fp8_A          155 QQIMDTSDKTGRLIKYDPSTKETTLLL----KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP  217 (322)
T ss_dssp             HHHHHHTCCCEEEEEEETTTTEEEEEE----EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred             ceehcccCCCceEEEEeCCCCEEEEec----cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence                     367888888766543322    112334578999999866655 55688999998753

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.29  E-value=0.00064  Score=55.06  Aligned_cols=152  Identities=7%  Similarity=0.039  Sum_probs=89.5

Q ss_pred             eeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CC----eEEEEE
Q psy10348         12 NFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DH----TLRLWN   85 (291)
Q Consensus        12 ~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg----~i~vwd   85 (291)
                      ....++++| +..    .|+++...+.|+.+|+++++... +.........++|++ +++.|+.+.. ++    .+.+.+
T Consensus       138 ~P~~lavdp~~~g----~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~  211 (430)
T 3tc9_A          138 GAVWLSFDPKNHN----HLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILT  211 (430)
T ss_dssp             CCCEEEEETTEEE----EEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEE
T ss_pred             CCCEEEECCCCCC----eEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEe
Confidence            446788997 332    55555444889999988665443 333445678999999 7785555543 22    233344


Q ss_pred             CCCccee--eeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         86 IKTDICI--AIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        86 ~~~~~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                       ..+...  ..+.    .......++++| ++.++++-..++.|..++...+.......                     
T Consensus       212 -~~g~~~~~~~l~----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~---------------------  265 (430)
T 3tc9_A          212 -RESGFKVITELT----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT---------------------  265 (430)
T ss_dssp             -GGGTSCSEEEEE----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE---------------------
T ss_pred             -CCCceeeeeeec----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE---------------------
Confidence             333322  2221    123456788999 56655555567889999987654211100                     


Q ss_pred             cccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCC
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGR  201 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~  201 (291)
                            .........++|+  ++ ++++-...+.|..++...
T Consensus       266 ------~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          266 ------IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             ------CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             ------cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence                  0011234578887  66 455555678899987653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.27  E-value=9.5e-05  Score=62.16  Aligned_cols=58  Identities=10%  Similarity=-0.084  Sum_probs=41.5

Q ss_pred             CeEEEEccCCcceeEEEeeec----------cceeEEEEecCCC---cEEEEeecCCeEEEEECCCcceeeee
Q psy10348         36 AVIRIFSPAFHACVRHFYGHG----------HAINELKFHPQDF---NLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      +.|..+|.++|+.+..++...          .++. +.... ++   ..++.++.+|.+.++|..+|+.+..+
T Consensus       272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~  342 (571)
T 2ad6_A          272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAE  342 (571)
T ss_dssp             TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence            369999999999988776321          1221 22223 55   36778899999999999999887765

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.26  E-value=0.0018  Score=56.44  Aligned_cols=205  Identities=9%  Similarity=-0.076  Sum_probs=116.4

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      ...+..++|.+...   .++++-...+.|+.+++...    .....+.........|++.+..++++++-...+.|.+.+
T Consensus       423 ~~~~~gl~~d~~~~---~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~  499 (791)
T 3m0c_C          423 LRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD  499 (791)
T ss_dssp             CSSEEEEEEETTTT---EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCceEEEeecccCC---eeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence            34566788877543   35555566678888887642    222333323455678999884556666767788999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      +........+   .........|++.|.+.+|+.+..  .+.|...++........+.                      
T Consensus       500 ldG~~~~~l~---~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~----------------------  554 (791)
T 3m0c_C          500 TKGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT----------------------  554 (791)
T ss_dssp             TTSSSEEEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC----------------------
T ss_pred             CCCCeEEEEE---eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe----------------------
Confidence            8754433333   234456889999998777766653  2678887776433211110                      


Q ss_pred             ccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                            ..-.....|+++  .+.| ++-...+.|..+++......          .+..-...-....  .++... +.+
T Consensus       555 ------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~----------~v~~~~~~l~~P~--glav~~-~~l  615 (791)
T 3m0c_C          555 ------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK----------TILEDEKRLAHPF--SLAVFE-DKV  615 (791)
T ss_dssp             ------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------EEEECTTTTSSEE--EEEEET-TEE
T ss_pred             ------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE----------EEecCCCccCCCC--EEEEeC-CEE
Confidence                  012345677776  4444 44455678999988654331          1211111111112  233331 344


Q ss_pred             EEEEcCCCcEEEEEcCCCCCC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      +++-...+.|...|..+++.+
T Consensus       616 YwtD~~~~~I~~~dk~tG~~~  636 (791)
T 3m0c_C          616 FWTDIINEAIFSANRLTGSDV  636 (791)
T ss_dssp             EEEETTTTEEEEEETTTCCCC
T ss_pred             EEEECCCCEEEEEeCCCCcce
Confidence            455556788888887777543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.25  E-value=4.9e-05  Score=64.01  Aligned_cols=58  Identities=5%  Similarity=0.002  Sum_probs=42.5

Q ss_pred             CeEEEEccCCcceeEEEee--ec--------cceeEEEEe-cCCC---cEEEEeecCCeEEEEECCCcceeeee
Q psy10348         36 AVIRIFSPAFHACVRHFYG--HG--------HAINELKFH-PQDF---NLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      +.|.-+|.++|+.+..++.  |.        .++. +... . ++   ..++.++.+|.++++|.++|+.+..+
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~  362 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDRSNGKLQNAF  362 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence            6899999999999888763  21        1221 1222 3 55   47888999999999999999887665

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.22  E-value=0.00093  Score=51.39  Aligned_cols=200  Identities=9%  Similarity=0.016  Sum_probs=103.9

Q ss_pred             cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-
Q psy10348         46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-  124 (291)
Q Consensus        46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-  124 (291)
                      .+.+..+.. ......++|++ +++++++-..++.|..||... +....+    .....+..+++.++|+++++..... 
T Consensus        22 ~~~~~~~p~-~~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~----~~~~~p~gia~~~dG~l~vad~~~~~   94 (306)
T 2p4o_A           22 AKIITSFPV-NTFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHA----TVEGKVSGLAFTSNGDLVATGWNADS   94 (306)
T ss_dssp             EEEEEEECT-TCCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEE----ECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred             ceEeEeCCC-CCCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEE----eCCCCceeEEEcCCCcEEEEeccCCc
Confidence            344445532 24567899999 888777766789999999874 433333    2235688999999998655544322 


Q ss_pred             -cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE-EcCC-EEEEecCCCeEEEecCCC
Q psy10348        125 -SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR-WLGD-FVLSKSCENCIICWKPGR  201 (291)
Q Consensus       125 -~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~l~~~~~d~~i~iwd~~~  201 (291)
                       .|..+|..+++.......     +                      .......++ +.+. .+++...++.|.++|...
T Consensus        95 ~~v~~~d~~~g~~~~~~~~-----~----------------------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~  147 (306)
T 2p4o_A           95 IPVVSLVKSDGTVETLLTL-----P----------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ  147 (306)
T ss_dssp             CEEEEEECTTSCEEEEEEC-----T----------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred             ceEEEEcCCCCeEEEEEeC-----C----------------------CccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence             366667666653211100     0                      000112222 2233 344444578888888764


Q ss_pred             CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCC-CCCCcceeEEEeccccccceee
Q psy10348        202 LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDV-QDPSSIKFQILSHPRCMSAVRQ  279 (291)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~  279 (291)
                      .......... ... .......-.....+  +  |++++|+++ ...+.|..+++.. ++. ... ..+..   ......
T Consensus       148 ~~~~v~~~~~-~~~-~~~~~~~~~~pngi--s--~dg~~lyv~d~~~~~I~~~~~~~~g~~-~~~-~~~~~---~~~P~g  216 (306)
T 2p4o_A          148 PSGSIWLEHP-MLA-RSNSESVFPAANGL--K--RFGNFLYVSNTEKMLLLRIPVDSTDKP-GEP-EIFVE---QTNIDD  216 (306)
T ss_dssp             TEEEEEEECG-GGS-CSSTTCCSCSEEEE--E--EETTEEEEEETTTTEEEEEEBCTTSCB-CCC-EEEEE---SCCCSS
T ss_pred             CcEeEEEECC-ccc-cccccCCCCcCCCc--C--cCCCEEEEEeCCCCEEEEEEeCCCCCC-Ccc-EEEec---cCCCCC
Confidence            3110000000 000 00000011112222  3  447666554 5678999999875 321 111 11111   134667


Q ss_pred             eEEccCCceee
Q psy10348        280 TTLSKNGNVLL  290 (291)
Q Consensus       280 ~~~s~~g~~l~  290 (291)
                      ++++++|++.+
T Consensus       217 i~vd~dG~l~v  227 (306)
T 2p4o_A          217 FAFDVEGNLYG  227 (306)
T ss_dssp             EEEBTTCCEEE
T ss_pred             eEECCCCCEEE
Confidence            88888887665

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.16  E-value=0.0032  Score=55.19  Aligned_cols=227  Identities=11%  Similarity=-0.025  Sum_probs=131.4

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--------------eeccceeEEEEecCCCcEEEEe
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--------------GHGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      ...|+++....++     .|..|+..+-|.+++..+++......              .....|.++...+ ++. |-.|
T Consensus       257 ~~~i~~i~~d~~g-----~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~-lWig  329 (781)
T 3v9f_A          257 SSYIFSIKQLKDN-----KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNN-IWIG  329 (781)
T ss_dssp             CCCEEEEEECTTS-----EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCC-EEEE
T ss_pred             CceEEEEEECCCC-----CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCC-EEEE
Confidence            3567787777666     67777775678889987665322111              1235688888887 655 4556


Q ss_pred             ecCCeEEEEECCCcceeeeec------cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCC
Q psy10348         76 SKDHTLRLWNIKTDICIAIFG------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA  149 (291)
Q Consensus        76 ~~dg~i~vwd~~~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~  149 (291)
                      +.++-|..++...+.......      ...-....|.++...++|. |..|+.++-|..||..++..... .     .+.
T Consensus       330 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~-~-----~~~  402 (781)
T 3v9f_A          330 TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYN-K-----ENR  402 (781)
T ss_dssp             EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC----------
T ss_pred             ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEc-c-----CCC
Confidence            666678889877554322210      0011345699999888776 45566566799999876542210 0     000


Q ss_pred             CccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec---CCcc
Q psy10348        150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN---FKDC  225 (291)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~  225 (291)
                                         ......|.++..+ ...|..|+.++-|..+|..+.+.             ..+.   ....
T Consensus       403 -------------------~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-------------~~~~~~~~~~~  450 (781)
T 3v9f_A          403 -------------------ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-------------QIIELEKNELL  450 (781)
T ss_dssp             --------------------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-------------EECCSTTTCCC
T ss_pred             -------------------CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-------------EEeccCCCCCC
Confidence                               1134568888887 55666677777888998766532             1121   1223


Q ss_pred             cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc---ccccceeeeEEccCCceee
Q psy10348        226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP---RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~  290 (291)
                      .|.  ++..++++. |..|+.. -|..||..+++..    ......   .....|.++...++|++.+
T Consensus       451 ~v~--~i~~d~~g~-lwigt~~-Gl~~~~~~~~~~~----~~~~~~~~~~~~~~i~~i~~d~~g~lWi  510 (781)
T 3v9f_A          451 DVR--VFYEDKNKK-IWIGTHA-GVFVIDLASKKVI----HHYDTSNSQLLENFVRSIAQDSEGRFWI  510 (781)
T ss_dssp             CEE--EEEECTTSE-EEEEETT-EEEEEESSSSSCC----EEECTTTSSCSCSCEEEEEECTTCCEEE
T ss_pred             eEE--EEEECCCCC-EEEEECC-ceEEEeCCCCeEE----ecccCcccccccceeEEEEEcCCCCEEE
Confidence            343  445566565 4445554 5888998776431    111111   1135688888888887654

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.13  E-value=0.0015  Score=50.48  Aligned_cols=185  Identities=7%  Similarity=-0.109  Sum_probs=103.3

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC---cceeeeeccccCCCCc
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT---DICIAIFGGVEGHRDE  104 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~  104 (291)
                      +|+.+.. ..|+..++++.+....+. .......++|.+.++.++++-..++.|..+++..   +.....+-  ...-..
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~--~~~~~~   78 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--SRDIQA   78 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE--CSSCSC
T ss_pred             EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE--eCCCCC
Confidence            4444443 568999998776655544 3456789999984556666666678999999875   12222220  222234


Q ss_pred             eEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348        105 VLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--  181 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  181 (291)
                      ...+++.+.+..|+.+ ...+.|.++++...... .+..                           ........++.+  
T Consensus        79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~---------------------------~~~~~P~~iavdp~  130 (316)
T 1ijq_A           79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFR---------------------------ENGSKPRAIVVDPV  130 (316)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-EEEE---------------------------CTTCCEEEEEEETT
T ss_pred             cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE-EEEE---------------------------CCCCCcceEEeCCC
Confidence            5788888765555444 55788999987643211 1100                           011234567775  


Q ss_pred             CCEEEEecC-C-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCC
Q psy10348        182 GDFVLSKSC-E-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQ  258 (291)
Q Consensus       182 ~~~l~~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~  258 (291)
                      +..|+.... . +.|...++.....          +.+.  ...-....  .++++|++..|+.+ +..+.|..+|+...
T Consensus       131 ~g~ly~~d~~~~~~I~~~~~dG~~~----------~~~~--~~~~~~P~--gla~d~~~~~lY~~D~~~~~I~~~d~dg~  196 (316)
T 1ijq_A          131 HGFMYWTDWGTPAKIKKGGLNGVDI----------YSLV--TENIQWPN--GITLDLLSGRLYWVDSKLHSISSIDVNGG  196 (316)
T ss_dssp             TTEEEEEECSSSCEEEEEETTSCCE----------EEEE--CSSCSCEE--EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCEEEEEccCCCCeEEEEcCCCCCe----------EEEE--ECCCCCce--EEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence            344443333 3 6788887654321          1111  11111222  34555656666554 46679999998753

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.13  E-value=0.0019  Score=51.48  Aligned_cols=184  Identities=12%  Similarity=-0.039  Sum_probs=104.7

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS  107 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~  107 (291)
                      +|+.+. ...|+..++........+.. ......++|.+.++.++++-...+.|..+++..+.....+   .........
T Consensus        89 ~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~---~~~~~~p~g  163 (386)
T 3v65_B           89 VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV---STGLESPGG  163 (386)
T ss_dssp             EEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE---CSSCSCCCC
T ss_pred             eeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE---eCCCCCccE
Confidence            555444 35788889876655444433 3457899999856666666667789999998865543333   222334567


Q ss_pred             EEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCE
Q psy10348        108 ADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDF  184 (291)
Q Consensus       108 ~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~  184 (291)
                      +++.+.+..|+.+ ...+.|.+.++........+.                            ........++++  +..
T Consensus       164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~----------------------------~~l~~P~giavdp~~g~  215 (386)
T 3v65_B          164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----------------------------QSLEKPRAIALHPMEGT  215 (386)
T ss_dssp             EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC----------------------------SSCSCEEEEEEETTTTE
T ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec----------------------------CCCCCCcEEEEEcCCCe
Confidence            8888766555444 446778888876433111100                            012234667776  344


Q ss_pred             -EEEecCC-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCC
Q psy10348        185 -VLSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQ  258 (291)
Q Consensus       185 -l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~  258 (291)
                       +++-... +.|..+++......          .+.  ...-.....  ++++|++..|+.+ +..+.|..+++...
T Consensus       216 ly~td~~~~~~I~r~~~dG~~~~----------~~~--~~~~~~PnG--lavd~~~~~lY~aD~~~~~I~~~d~dG~  278 (386)
T 3v65_B          216 IYWTDWGNTPRIEASSMDGSGRR----------IIA--DTHLFWPNG--LTIDYAGRRMYWVDAKHHVIERANLDGS  278 (386)
T ss_dssp             EEEEECSSSCEEEEEETTSCSCE----------EEE--CSSCSCEEE--EEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred             EEEeccCCCCEEEEEeCCCCCcE----------EEE--ECCCCCeee--EEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence             4443334 67888887654221          111  111112233  4444445555554 46678999998754

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.12  E-value=4.2e-05  Score=65.86  Aligned_cols=202  Identities=9%  Similarity=-0.065  Sum_probs=108.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..+..++|.+...   .++++-...+.|+.+++..    ......+.........|++.+..+.++++-...+.|.+.++
T Consensus       406 ~~p~gla~d~~~~---~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~  482 (699)
T 1n7d_A          406 RNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  482 (699)
T ss_dssp             TTCCCCEEETTTT---EEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred             cceEEEccccccC---eEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence            3455778877653   2344434567888888764    22222222112335678888645666666666788999998


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ........+   .........++++|.+.+|+.+..  .+.|..+++...... .+.                       
T Consensus       483 dg~~~~~l~---~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~-----------------------  535 (699)
T 1n7d_A          483 KGVKRKTLF---REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLV-----------------------  535 (699)
T ss_dssp             SSCCEEEEC---CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EES-----------------------
T ss_pred             CCCceEEEE---eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEE-----------------------
Confidence            754433333   222344578889987666655543  256777666432211 100                       


Q ss_pred             cccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        165 FSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                          ...-.....|+++   +.++++-...+.|..+++.....          ..+............  ++++. +.++
T Consensus       536 ----~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~----------~~~~~~~~~~~~P~g--lavd~-~~ly  598 (699)
T 1n7d_A          536 ----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHPFS--LAVFE-DKVF  598 (699)
T ss_dssp             ----CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC----------EEECCCSSSCSSCCC--CEEET-TEEE
T ss_pred             ----eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce----------EEEEecCCcCCCceE--eEEEC-CEEE
Confidence                0011224567776   34555556678999999865322          111111100011111  23333 3455


Q ss_pred             EEEcCCCcEEEEEcCCCC
Q psy10348        242 AVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~  259 (291)
                      ++....+.|..++..+++
T Consensus       599 wtd~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          599 WTDIINEAIFSANRLTGS  616 (699)
T ss_dssp             EECSTTTCEEEEETTTEE
T ss_pred             EEeCCCCeEEEEEccCCC
Confidence            555677899999987664

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.10  E-value=0.0018  Score=50.13  Aligned_cols=201  Identities=6%  Similarity=-0.088  Sum_probs=119.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD   89 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~   89 (291)
                      ....+++|.+...   .++.+-...+.|..++++.+... ..+...-.....+++.+.++.++++-...+.|.++++...
T Consensus        35 ~~~~~ld~d~~~~---~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~  111 (318)
T 3sov_A           35 EDAAAVDFVFSHG---LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS  111 (318)
T ss_dssp             EEEEEEEEEGGGT---EEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CccEEEEEEeCCC---EEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence            4566888888653   45556566788999998765422 2232223456788998746666677667789999998743


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      .....+   .........+++.|.+..|+.+..  .+.|...++..... ..+..                         
T Consensus       112 ~~~~l~---~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~-------------------------  162 (318)
T 3sov_A          112 LRKVLF---WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN-------------------------  162 (318)
T ss_dssp             SCEEEE---CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEEC-------------------------
T ss_pred             cEEEEE---eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEE-------------------------
Confidence            322222   234456789999997777766653  46777777653221 11100                         


Q ss_pred             ccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348        168 RDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG  244 (291)
Q Consensus       168 ~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~  244 (291)
                        ..-.....++++  ++ +.++-+..+.|..+|+.....          +.+.  .........+++  +. +.++.+-
T Consensus       163 --~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~----------~~~~--~~~~~~P~glav--~~-~~lywtd  225 (318)
T 3sov_A          163 --SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR----------QAVV--KGSLPHPFALTL--FE-DILYWTD  225 (318)
T ss_dssp             --SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEE--CSCCSCEEEEEE--ET-TEEEEEE
T ss_pred             --CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce----------EEEe--cCCCCCceEEEE--eC-CEEEEEe
Confidence              011234678887  34 444555678999999865322          1111  111122233333  32 4555666


Q ss_pred             cCCCcEEEEEcCCCCC
Q psy10348        245 NQSGRTYVWDLDVQDP  260 (291)
Q Consensus       245 ~~dg~i~vwd~~~~~~  260 (291)
                      ...+.|..++..+++.
T Consensus       226 ~~~~~V~~~~~~~G~~  241 (318)
T 3sov_A          226 WSTHSILACNKYTGEG  241 (318)
T ss_dssp             TTTTEEEEEETTTCCS
T ss_pred             cCCCeEEEEECCCCCc
Confidence            6778899999877754

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.05  E-value=0.0015  Score=52.97  Aligned_cols=154  Identities=10%  Similarity=0.060  Sum_probs=85.7

Q ss_pred             eeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---Ce-EEEEEC
Q psy10348         12 NFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HT-LRLWNI   86 (291)
Q Consensus        12 ~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~-i~vwd~   86 (291)
                      ....++|.|+ ..   ..|+.+...+.|+.++..+++.... .........+++++ +++++++...+   .. +...+.
T Consensus       140 ~P~gvavd~~s~~---g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~  214 (433)
T 4hw6_A          140 NIWRMMFDPNSNY---DDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTR  214 (433)
T ss_dssp             CCCEEEECTTTTT---CEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECG
T ss_pred             CCceEEEccccCC---CEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEEC
Confidence            3457888884 11   2455554448999999887765443 33445678999999 77755543321   12 333332


Q ss_pred             CCcce-eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         87 KTDIC-IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        87 ~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ..+.. ...+    ........++++| ++.++++-..++.|+.+|..++.....+..                      
T Consensus       215 ~~~~~~~~~~----~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~----------------------  268 (433)
T 4hw6_A          215 ASGFTERLSL----CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM----------------------  268 (433)
T ss_dssp             GGTTCCEEEE----EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE----------------------
T ss_pred             CCCeeccccc----cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec----------------------
Confidence            22111 0112    1223446688899 565555555678899999876653211110                      


Q ss_pred             cccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCC
Q psy10348        165 FSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPG  200 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~  200 (291)
                          .+....-..++++  ++ +.++-...+.|..++..
T Consensus       269 ----~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          269 ----MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             ----CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             ----cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence                0001112357887  66 44555567899997764

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.93  E-value=0.0026  Score=48.79  Aligned_cols=188  Identities=9%  Similarity=0.054  Sum_probs=95.2

Q ss_pred             CEEEEecCC----CeEEEEccCCcceeEEEeeeccce-eEEEEecCCCcEEEEeecC------CeEEEEECCCcceeeee
Q psy10348         27 PLLAVAGSR----AVIRIFSPAFHACVRHFYGHGHAI-NELKFHPQDFNLLLSVSKD------HTLRLWNIKTDICIAIF   95 (291)
Q Consensus        27 ~~l~~~~~d----g~i~vw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~   95 (291)
                      .+++.|+.+    ..+.+||+.+++-...-....... .+++..  ++.+++.|+.+      ..+.+||..+.+.... 
T Consensus        57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~-  133 (306)
T 3ii7_A           57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK-  133 (306)
T ss_dssp             EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-
T ss_pred             EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-
Confidence            477777754    678889988765432211111111 122222  55777777765      4588999887654332 


Q ss_pred             ccccCCCCceEEEEEccCCCEEEEEec---------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         96 GGVEGHRDEVLSADFDLLGTKIMSCGM---------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ..+......-..+.+  ++..++.|+.         -..+.+||+.+.+-...-       +             .+   
T Consensus       134 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-------~-------------~p---  188 (306)
T 3ii7_A          134 PSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-------P-------------MI---  188 (306)
T ss_dssp             CCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-------C-------------CS---
T ss_pred             CCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-------C-------------cc---
Confidence            111222222222222  5666666654         244778888765422110       0             00   


Q ss_pred             cccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        167 TRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                         .....-..+.+.+.+++.|+.+     ..+.+||+.+.+-..          +..+........  ....+  ++++
T Consensus       189 ---~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~~--~~i~  251 (306)
T 3ii7_A          189 ---EARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM----------VSPMPWKGVTVK--CAAVG--SIVY  251 (306)
T ss_dssp             ---SCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEE----------CCCCSCCBSCCE--EEEET--TEEE
T ss_pred             ---chhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE----------CCCCCCCcccee--EEEEC--CEEE
Confidence               0111122333446667777654     457888887653211          111111111111  22233  7888


Q ss_pred             EEEcCC-----CcEEEEEcCCCC
Q psy10348        242 AVGNQS-----GRTYVWDLDVQD  259 (291)
Q Consensus       242 ~~~~~d-----g~i~vwd~~~~~  259 (291)
                      +.|+.+     ..+.+||+.+.+
T Consensus       252 v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          252 VLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             EEECBCSSSBCCEEEEEETTTTE
T ss_pred             EEeCcCCCeeeeeEEEEcCCCCe
Confidence            888854     468899998864

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.88  E-value=0.0034  Score=48.06  Aligned_cols=188  Identities=12%  Similarity=0.095  Sum_probs=93.9

Q ss_pred             CEEEEecCC-----CeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCC-----eEEEEECCCcceeeee
Q psy10348         27 PLLAVAGSR-----AVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDH-----TLRLWNIKTDICIAIF   95 (291)
Q Consensus        27 ~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~   95 (291)
                      .+++.|+.+     ..+.+||..+.+-...-.... ..-.+++..  ++.+++.|+.++     .+.+||+.+.+.... 
T Consensus        63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-  139 (302)
T 2xn4_A           63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV-  139 (302)
T ss_dssp             EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-
T ss_pred             EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeec-
Confidence            477777754     358888887664322111111 111222222  557777777653     477889887654332 


Q ss_pred             ccccCCCCceEEEEEccCCCEEEEEecC-------CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         96 GGVEGHRDEVLSADFDLLGTKIMSCGMD-------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ..+.........+.+  ++..++.|+.+       ..+.+||+.+.+-...-       +             .+     
T Consensus       140 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-------~-------------~p-----  192 (302)
T 2xn4_A          140 APMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-------E-------------MS-----  192 (302)
T ss_dssp             CCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-------C-------------CS-----
T ss_pred             CCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-------C-------------Cc-----
Confidence            111222222222222  56666666643       34778887665422110       0             00     


Q ss_pred             cccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        169 DIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       169 ~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                       ........+.+.+.+++.|+.+     ..+.+||+.+.+-..          +...........  ....  ++++++.
T Consensus       193 -~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~----------~~~~~~~r~~~~--~~~~--~~~i~v~  257 (302)
T 2xn4_A          193 -TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ----------VADMNMCRRNAG--VCAV--NGLLYVV  257 (302)
T ss_dssp             -SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE----------ECCCSSCCBSCE--EEEE--TTEEEEE
T ss_pred             -cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee----------CCCCCCccccCe--EEEE--CCEEEEE
Confidence             0111122334456677777654     368888887653311          111111111111  1223  3788888


Q ss_pred             EcCCC-----cEEEEEcCCCC
Q psy10348        244 GNQSG-----RTYVWDLDVQD  259 (291)
Q Consensus       244 ~~~dg-----~i~vwd~~~~~  259 (291)
                      |+.++     .+.+||+.+.+
T Consensus       258 GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          258 GGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             CCBCSSSBCCCEEEEETTTTE
T ss_pred             CCcCCCcccccEEEEcCCCCe
Confidence            87654     48999998763

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.87  E-value=0.0029  Score=48.38  Aligned_cols=188  Identities=8%  Similarity=0.062  Sum_probs=95.3

Q ss_pred             CEEEEecCC-----CeEEEEccCCcc---eeEEEeeec-cceeEEEEecCCCcEEEEeecC-----CeEEEEECCCccee
Q psy10348         27 PLLAVAGSR-----AVIRIFSPAFHA---CVRHFYGHG-HAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDICI   92 (291)
Q Consensus        27 ~~l~~~~~d-----g~i~vw~~~~~~---~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~   92 (291)
                      .+++.|+.+     ..+.+||+.+++   -...-.... ..-.+++..  ++.+++.|+.+     ..+.+||+.+.+..
T Consensus        64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~  141 (301)
T 2vpj_A           64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS  141 (301)
T ss_dssp             EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred             EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence            477777754     468899987765   222111111 111122222  55777777654     35888998876543


Q ss_pred             eeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        93 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ..- .+......-..+.+  ++..++.|+.+     ..+.+||+.+.+-...-       +             .+    
T Consensus       142 ~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-------~-------------~p----  194 (301)
T 2vpj_A          142 MLG-DMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-------P-------------MA----  194 (301)
T ss_dssp             EEE-ECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-------C-------------CS----
T ss_pred             ECC-CCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC-------C-------------CC----
Confidence            321 11222222222222  56677777654     35778887765422110       0             00    


Q ss_pred             ccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                        ........+.+.+.+++.|+.+     ..+.+||+.+.+-.          .+..........  .....+  +++++
T Consensus       195 --~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~----------~~~~~p~~r~~~--~~~~~~--~~i~v  258 (301)
T 2vpj_A          195 --TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT----------TVTSMTTPRCYV--GATVLR--GRLYA  258 (301)
T ss_dssp             --SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE----------EECCCSSCCBSC--EEEEET--TEEEE
T ss_pred             --cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE----------ECCCCCCcccce--eEEEEC--CEEEE
Confidence              0111122334446677777664     46888998765331          111111111111  122333  77888


Q ss_pred             EEcCC-----CcEEEEEcCCCC
Q psy10348        243 VGNQS-----GRTYVWDLDVQD  259 (291)
Q Consensus       243 ~~~~d-----g~i~vwd~~~~~  259 (291)
                      .|+.+     ..+.+||+.+.+
T Consensus       259 ~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          259 IAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             ECCBCSSSBEEEEEEEETTTTE
T ss_pred             EcCcCCCcccccEEEEcCCCCe
Confidence            88765     357889988764

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.82  E-value=0.0079  Score=48.16  Aligned_cols=184  Identities=8%  Similarity=-0.088  Sum_probs=105.6

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc----ceeeeeccccCCCC
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD----ICIAIFGGVEGHRD  103 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~  103 (291)
                      +|+.+. ...|+..++........+. ....+..|+|++.++.++.+-...+.|..+++...    .....+   .....
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~---~~~~~  159 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQ  159 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE---CSSCS
T ss_pred             eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE---eCCCC
Confidence            555544 4689999988665544443 44678899999855566666566788999998752    222222   23445


Q ss_pred             ceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-
Q psy10348        104 EVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-  181 (291)
Q Consensus       104 ~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-  181 (291)
                      ....+++.+.+..|+.+ ...+.|.+.++........+.                            ........++++ 
T Consensus       160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~----------------------------~~~~~P~~iavdp  211 (400)
T 3p5b_L          160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR----------------------------ENGSKPRAIVVDP  211 (400)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE----------------------------CSSCCEEEEEEET
T ss_pred             CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe----------------------------CCCCCcceEEEec
Confidence            67889998855555444 457788888886543221110                            012235667776 


Q ss_pred             -CCEEEEec-C-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCC
Q psy10348        182 -GDFVLSKS-C-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDV  257 (291)
Q Consensus       182 -~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~  257 (291)
                       +.+|+... . .+.|...++......          .+  ....-.....  +++++++..|+.+ +..+.|..+|+..
T Consensus       212 ~~g~ly~td~~~~~~I~~~~~dG~~~~----------~~--~~~~l~~P~g--lavd~~~~~lY~aD~~~~~I~~~d~dG  277 (400)
T 3p5b_L          212 VHGFMYWTDWGTPAKIKKGGLNGVDIY----------SL--VTENIQWPNG--ITLDLLSGRLYWVDSKLHSISSIDVNG  277 (400)
T ss_dssp             TTTEEEEEECSSSCCEEEEETTSCSCE----------EE--ECSSCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             ccCeEEEEeCCCCCEEEEEeCCCCccE----------EE--EECCCCceEE--EEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence             34444433 2 367888877654321          11  1111122233  4555556666655 4567899999876


Q ss_pred             C
Q psy10348        258 Q  258 (291)
Q Consensus       258 ~  258 (291)
                      .
T Consensus       278 ~  278 (400)
T 3p5b_L          278 G  278 (400)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.80  E-value=0.0013  Score=57.26  Aligned_cols=72  Identities=15%  Similarity=0.056  Sum_probs=48.2

Q ss_pred             ceeEEEEe-cCCCcEEEEeec-CC----eEEEEECCCc-ceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-----c
Q psy10348         58 AINELKFH-PQDFNLLLSVSK-DH----TLRLWNIKTD-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-----S  125 (291)
Q Consensus        58 ~v~~~~~~-~~~~~~l~s~~~-dg----~i~vwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~  125 (291)
                      .+...+|+ | |+++||-+.. +|    .|+++|+.++ +.+..     .-......+.|+|+|+.|+....|.     .
T Consensus       175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~  248 (751)
T 2xe4_A          175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----KVSGTNGEIVWGPDHTSLFYVTKDETLRENK  248 (751)
T ss_dssp             EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----CEEEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred             EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----cccCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence            57789999 9 8887775432 33    5999999988 53211     0111234688999999888777652     5


Q ss_pred             EEEEeccCch
Q psy10348        126 LKLWDLTKPE  135 (291)
Q Consensus       126 i~v~d~~~~~  135 (291)
                      |..+++.++.
T Consensus       249 v~~~~lgt~~  258 (751)
T 2xe4_A          249 VWRHVMGKLQ  258 (751)
T ss_dssp             EEEEETTSCG
T ss_pred             EEEEECCCCc
Confidence            7777776654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.78  E-value=0.008  Score=47.24  Aligned_cols=105  Identities=15%  Similarity=0.076  Sum_probs=60.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEe---eeccceeEEEEecC---CCcEEEEeec---C--
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFY---GHGHAINELKFHPQ---DFNLLLSVSK---D--   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~l~s~~~---d--   78 (291)
                      .....++|.|++     .|+++..+|.|++++. +++ .+..+.   ........|+++|+   ++.+.++-..   +  
T Consensus        29 ~~P~~ia~~pdG-----~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~  102 (354)
T 3a9g_A           29 EVPWSIAPLGGG-----RYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH  102 (354)
T ss_dssp             SCEEEEEEEETT-----EEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred             CCCeEEEEcCCC-----eEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence            456789999998     4555566799999974 454 222111   11245789999993   3555554432   3  


Q ss_pred             --CeEEEEECCCc--c---eeeeecccc-CCCCceEEEEEccCCCEEEEEe
Q psy10348         79 --HTLRLWNIKTD--I---CIAIFGGVE-GHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        79 --g~i~vwd~~~~--~---~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                        ..|..|+...+  .   ....+..+. ........++|.|+|.+.++.+
T Consensus       103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred             cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence              56777876643  1   111111011 1112346789999998666644

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.75  E-value=0.0051  Score=47.30  Aligned_cols=175  Identities=9%  Similarity=-0.029  Sum_probs=98.9

Q ss_pred             eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccC----C--CCceEEEEE---ccCCCEEEEEe---
Q psy10348         54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG----H--RDEVLSADF---DLLGTKIMSCG---  121 (291)
Q Consensus        54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~--~~~i~~~~~---~~~~~~l~~~~---  121 (291)
                      ...-.-.+++|.+.++.++++.-..++|..||...+......  ...    .  ...+..+.|   .|+++++++..   
T Consensus        10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~--~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~   87 (334)
T 2p9w_A           10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV--IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK   87 (334)
T ss_dssp             CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC--CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred             CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe--cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence            334445678999855566666558999999999765433322  122    1  124689999   68877776543   


Q ss_pred             ----------cCCcEEEEecc---CchhhhhhccccccCCCCccccccCccccCcccccccc-cCcceeEEEEc--CCEE
Q psy10348        122 ----------MDHSLKLWDLT---KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYVDCVRWL--GDFV  185 (291)
Q Consensus       122 ----------~d~~i~v~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l  185 (291)
                                .+..|..||+.   +++.+....-                ......+....+ -......++.+  |+..
T Consensus        88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL----------------~~~~~~~~~~~g~~~~~~nDvavD~~GnaY  151 (334)
T 2p9w_A           88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNF----------------EKVQDEFEKKAGKRPFGVVQSAQDRDGNSY  151 (334)
T ss_dssp             TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEES----------------HHHHHHHHHHHSSCCEEEEEEEECTTSCEE
T ss_pred             cccccccccCCCCEEEEEcCCcCCCCCEEEEecC----------------ccccccccccccccccCCceeEECCCCCEE
Confidence                      26779999998   6665432210                000000000000 11235667776  7777


Q ss_pred             EEecCC-CeEEEecCCCCCccccccCCCceeeeeee--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348        186 LSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRL--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV  257 (291)
Q Consensus       186 ~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  257 (291)
                      ++++.. +.|...+.........         ....  .......+.+  ..+|++..|++....|.+..+|+..
T Consensus       152 Vt~s~~~~~I~rV~pdG~~~~~~---------~~~~~~~~~~~G~nGI--v~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          152 VAFALGMPAIARVSADGKTVSTF---------AWESGNGGQRPGYSGI--TFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             EEEEESSCEEEEECTTSCCEEEE---------EECCCCSSSCCSCSEE--EEETTTTEEEEESSSSSEEEEECSS
T ss_pred             EeCCCCCCeEEEEeCCCCEEeee---------eecCCCcccccCcceE--EEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            777766 7777766654321100         0000  1111112233  4457799888887799999999884

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.75  E-value=0.018  Score=50.30  Aligned_cols=184  Identities=8%  Similarity=-0.093  Sum_probs=104.3

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc----ceeeeeccccCCCC
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD----ICIAIFGGVEGHRD  103 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~  103 (291)
                      +|+.+. ...|+..++...+....+. ....+..|+|.+.++.++++-...+.|+.+++...    .....+   .....
T Consensus       397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi---~~~l~  471 (791)
T 3m0c_C          397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQ  471 (791)
T ss_dssp             EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE---CSSCS
T ss_pred             cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE---ecCCC
Confidence            444443 4568888887665444443 34567899999855666666666788999988742    222333   22345


Q ss_pred             ceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-
Q psy10348        104 EVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-  181 (291)
Q Consensus       104 ~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-  181 (291)
                      ....|++.+.++.|+.+ ...+.|.+.++...... .+..                           ........|+++ 
T Consensus       472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-~l~~---------------------------~~l~~P~gIaVDp  523 (791)
T 3m0c_C          472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFR---------------------------ENGSKPRAIVVDP  523 (791)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-EEEE---------------------------CTTCCEEEEEEET
T ss_pred             CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-EEEe---------------------------CCCCCcceEEEec
Confidence            56788888877666555 45788999998754321 1110                           012235677776 


Q ss_pred             -CCEEEEec-C-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCC
Q psy10348        182 -GDFVLSKS-C-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDV  257 (291)
Q Consensus       182 -~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~  257 (291)
                       ..+|+... . .+.|...++......            ..+...-.....  +++++.+..|+.+ ...+.|...++..
T Consensus       524 ~~g~LYwtD~g~~~~I~~~~~dG~~~~------------~lv~~~l~~P~G--LavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          524 VHGFMYWTDWGTPAKIKKGGLNGVDIY------------SLVTENIQWPNG--ITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             TTTEEEEEECSSSCEEEEEETTSCCEE------------EEECSSCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCCCEEEecCCCCCeEEEEecCCCceE------------EEEeCCCCCceE--EEEecCCCeEEEEeCCCCcEEEEecCC
Confidence             34444443 2 367888887654321            111111122333  4444445655555 4567899999865


Q ss_pred             C
Q psy10348        258 Q  258 (291)
Q Consensus       258 ~  258 (291)
                      .
T Consensus       590 ~  590 (791)
T 3m0c_C          590 G  590 (791)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.74  E-value=0.0085  Score=46.31  Aligned_cols=185  Identities=13%  Similarity=-0.005  Sum_probs=103.7

Q ss_pred             EEEEecCCCeEEEEccCCcc-eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee-eeeccccCCCCce
Q psy10348         28 LLAVAGSRAVIRIFSPAFHA-CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI-AIFGGVEGHRDEV  105 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~i  105 (291)
                      +|+.+. ...|+..+++... ....+........+++|.+.++.++.+-...+.|..+++..+... ..+   ...-...
T Consensus         6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~---~~~l~~p   81 (318)
T 3sov_A            6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV---VSGLLSP   81 (318)
T ss_dssp             EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE---EECCSCC
T ss_pred             EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE---cCCCCCc
Confidence            555544 4689999998653 122222223456789999855666677667788999998765322 122   1222345


Q ss_pred             EEEEEccCCCEEE-EEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        106 LSADFDLLGTKIM-SCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       106 ~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      ..+++.+.+..|+ +-...+.|.++++...... .+.                           .........++++  +
T Consensus        82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~---------------------------~~~~~~P~giavdp~~  133 (318)
T 3sov_A           82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLF---------------------------WQELDQPRAIALDPSS  133 (318)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE---------------------------CSSCSSEEEEEEEGGG
T ss_pred             cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEE---------------------------eCCCCCccEEEEeCCC
Confidence            6788887555554 4445678999987653311 110                           0012234567776  3


Q ss_pred             CEEEEec--CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCC
Q psy10348        183 DFVLSKS--CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQ  258 (291)
Q Consensus       183 ~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~  258 (291)
                      ..|+...  ..+.|...++.....          ..+.  ...-..  ...++++|++..|+.+ +..+.|..+|+...
T Consensus       134 g~ly~td~~~~~~I~r~~~dG~~~----------~~~~--~~~l~~--Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~  198 (318)
T 3sov_A          134 GFMYWTDWGEVPKIERAGMDGSSR----------FIII--NSEIYW--PNGLTLDYEEQKLYWADAKLNFIHKSNLDGT  198 (318)
T ss_dssp             TEEEEEECSSSCEEEEEETTSCSC----------EEEE--CSSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CEEEEEecCCCCEEEEEEcCCCCe----------EEEE--ECCCCC--ccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence            4444443  357788887754322          1111  111111  2235555656655554 56788999998753

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.67  E-value=0.015  Score=47.13  Aligned_cols=116  Identities=9%  Similarity=0.042  Sum_probs=68.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCC----CeEEEEccCCccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSR----AVIRIFSPAFHACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~d----g~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .....+++++++    .++++....    ..+...+...+... ..+. .-.....+++.|.++.++++-..++.|+.+|
T Consensus       182 ~~P~giavd~dG----~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d  256 (433)
T 4hw6_A          182 GQCADVNFTLNG----DMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYD  256 (433)
T ss_dssp             SCEEEEEECTTC----CEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEEC
T ss_pred             CCccEEEECCCC----CEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEE
Confidence            446788888887    455554321    12333333222111 1222 2344567889985666666666778899999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEecc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLT  132 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~  132 (291)
                      ..++.....+.. .+....-..++|+|++++|+.+. ..+.|+.++..
T Consensus       257 ~~~g~~~~~~~~-~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          257 PATGTLTEEEVM-MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             TTTCCEEEEEEE-CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             CCCCeEEEEEec-cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            887765222211 12223335799999999665554 46789998865

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.67  E-value=0.027  Score=51.48  Aligned_cols=166  Identities=15%  Similarity=0.079  Sum_probs=100.1

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEE-eeeccceeEEEEecCCCcEE
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQDFNLL   72 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l   72 (291)
                      .+.+..++.+.|++...-......++++|.          ..|.|++|++..+++.... ...+++|++++--.  |.++
T Consensus       822 ~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~--g~Ll  899 (1158)
T 3ei3_A          822 AHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN--GKLL  899 (1158)
T ss_dssp             EEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEET--TEEE
T ss_pred             EEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeC--CEEE
Confidence            356667778887775442222346899886          3488999998744322211 13467888887663  4444


Q ss_pred             EEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348         73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST  152 (291)
Q Consensus        73 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~  152 (291)
                      ++ - ..+|++|++...+.+..-.  ..+. .|..+.....+++++.|..-..+.++..+...  ..+.           
T Consensus       900 a~-i-g~~l~vy~l~~~~~L~~~~--~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~--~~L~-----------  961 (1158)
T 3ei3_A          900 AS-I-NSTVRLYEWTTEKELRTEC--NHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPME--GNFE-----------  961 (1158)
T ss_dssp             EE-E-TTEEEEEEECTTSCEEEEE--EECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTT--TEEE-----------
T ss_pred             EE-c-CCEEEEEECCCCceEEEEe--eccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCC--CeEE-----------
Confidence            43 3 4789999998665444110  1111 12222332357789999887778776543321  0000           


Q ss_pred             ccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCC
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~  201 (291)
                                  .-..+.+...++++.+- .+.++.+..+|.+.+.....
T Consensus       962 ------------~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~  999 (1158)
T 3ei3_A          962 ------------EIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS  999 (1158)
T ss_dssp             ------------EEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred             ------------EEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence                        00112356678888885 77888899999999987654

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.67  E-value=0.012  Score=45.75  Aligned_cols=220  Identities=7%  Similarity=-0.032  Sum_probs=107.0

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe---eeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY---GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ...+.++.|.+ .    ..+++ +..|.|..- .+.|+.-..+.   .+...+..+.+.+ ++..++.+ .+|.|.. ..
T Consensus        79 ~~~~~~i~~~~-~----~~~~~-g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~  148 (327)
T 2xbg_A           79 DYRFNSVSFQG-N----EGWIV-GEPPIMLHT-TDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIYR-TK  148 (327)
T ss_dssp             CCEEEEEEEET-T----EEEEE-EETTEEEEE-SSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEEE-ES
T ss_pred             CccEEEEEecC-C----eEEEE-ECCCeEEEE-CCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEEE-Ec
Confidence            34688898875 3    24444 556655442 22233222221   1234567788776 66666655 4554422 22


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEE-EeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL-WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ..|+.-....  ......+..+.+.+++.+++.+. +|.+.. .|- .+..-..+.                        
T Consensus       149 DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~------------------------  200 (327)
T 2xbg_A          149 DSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHN------------------------  200 (327)
T ss_dssp             STTSSEEEEE--CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEE------------------------
T ss_pred             CCCCCCEEee--cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECC------------------------
Confidence            2343333221  34556789999999887776654 454433 331 011100000                        


Q ss_pred             ccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC----CcccEEEEEEEecCCCcE
Q psy10348        166 STRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF----KDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~  240 (291)
                         ......+..+.+. ...++..+.+|.+.+.+...++.            -.....    ....+.  .+.+.+++.+
T Consensus       201 ---~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~t------------W~~~~~~~~~~~~~~~--~v~~~~~~~~  263 (327)
T 2xbg_A          201 ---RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSEN------------WGELLSPLRRNSVGFL--DLAYRTPNEV  263 (327)
T ss_dssp             ---CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEE------------ECCCBCTTSSCCSCEE--EEEESSSSCE
T ss_pred             ---CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCe------------eEeccCCcccCCcceE--EEEecCCCEE
Confidence               0123446677776 33444555678877763221211            111110    111233  3445566777


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEccCCceee
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++++. +|.| ++....++.-    ..+. .......+.++.|.++++.++
T Consensus       264 ~~~g~-~g~i-~~S~DgG~tW----~~~~~~~~~~~~~~~v~~~~~~~~~~  308 (327)
T 2xbg_A          264 WLAGG-AGAL-LCSQDGGQTW----QQDVDVKKVPSNFYKILFFSPDQGFI  308 (327)
T ss_dssp             EEEES-TTCE-EEESSTTSSC----EECGGGTTSSSCCCEEEEEETTEEEE
T ss_pred             EEEeC-CCeE-EEeCCCCccc----EEcCccCCCCCCeEEEEEECCCceEE
Confidence            77665 6666 4455544321    1121 111234567788876666554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.65  E-value=0.022  Score=48.52  Aligned_cols=199  Identities=7%  Similarity=-0.156  Sum_probs=117.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      .....++|.+...   .++++-..++.|..++++.......+.........|++.+..+++.++-...+.|.+.++....
T Consensus        37 ~~~~~l~~d~~~~---~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~  113 (628)
T 4a0p_A           37 KEASALDFDVTDN---RIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH  113 (628)
T ss_dssp             SCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred             CceEEEEEECCCC---EEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence            4567888888653   4555556678999998875443333332224577899987456666766667889999987443


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                      ....+   ...-.....+++.|....|+.+..  .+.|...++...... .+.                           
T Consensus       114 ~~~l~---~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~---------------------------  162 (628)
T 4a0p_A          114 RQVLV---WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLV---------------------------  162 (628)
T ss_dssp             CEEEE---CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE---------------------------
T ss_pred             EEEEE---eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEE---------------------------
Confidence            32222   233456789999997666666653  456666666543311 110                           


Q ss_pred             cccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348        169 DIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN  245 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~  245 (291)
                       ..-.....|+++  ++.| ++-...+.|..+|+.....          +.+...   ......  ++.+. +.++++-.
T Consensus       163 -~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~----------~v~~~~---l~~P~g--lav~~-~~ly~tD~  225 (628)
T 4a0p_A          163 -PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR----------EVIADD---LPHPFG--LTQYQ-DYIYWTDW  225 (628)
T ss_dssp             -CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEEC---CSCEEE--EEEET-TEEEEEET
T ss_pred             -CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce----------EEeecc---CCCceE--EEEEC-CEEEEecC
Confidence             012335677777  3444 4445578899999865432          112111   111223  33332 44445555


Q ss_pred             CCCcEEEEEcCCCCC
Q psy10348        246 QSGRTYVWDLDVQDP  260 (291)
Q Consensus       246 ~dg~i~vwd~~~~~~  260 (291)
                      ..+.|...|..+++.
T Consensus       226 ~~~~I~~~dk~tg~~  240 (628)
T 4a0p_A          226 SRRSIERANKTSGQN  240 (628)
T ss_dssp             TTTEEEEEETTTCCS
T ss_pred             CCCEEEEEECCCCCc
Confidence            678899999877754

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.63  E-value=0.019  Score=47.06  Aligned_cols=113  Identities=7%  Similarity=0.033  Sum_probs=68.2

Q ss_pred             eeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCcceeEEEeee---ccceeEEEE-------ecCCCcEEEEeecCC-
Q psy10348         12 NFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH---GHAINELKF-------HPQDFNLLLSVSKDH-   79 (291)
Q Consensus        12 ~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~l~s~~~dg-   79 (291)
                      ....++|.|. ..   .++++....+.|++.|++++.+...+..-   ......++|       ++ ++..|+.+...+ 
T Consensus       140 ~p~~la~dp~~~~---~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~  215 (496)
T 3kya_A          140 DNGRLAFDPLNKD---HLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDG  215 (496)
T ss_dssp             SEEEEEEETTEEE---EEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCT
T ss_pred             CCCEEEEccCCCC---EEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCC
Confidence            3568899983 32   35555554578999998876655444321   124788999       99 777566555443 


Q ss_pred             ------eEEEEECCC-ccee-----eeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEecc
Q psy10348         80 ------TLRLWNIKT-DICI-----AIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLT  132 (291)
Q Consensus        80 ------~i~vwd~~~-~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~  132 (291)
                            .|.+.+... +...     ..+.   . -.....++.+|++.. +++-..++.|..+|+.
T Consensus       216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~---~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~  277 (496)
T 3kya_A          216 KGDESPSVYIIKRNADGTFDDRSDIQLIA---A-YKQCNGATIHPINGELYFNSYEKGQVFRLDLV  277 (496)
T ss_dssp             TGGGEEEEEEEECCTTSCCSTTSCEEEEE---E-ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred             CcccCceEEEEecCCCCceeecccceeec---c-CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence                  256665433 2221     1221   1 123356788995554 4455567889999987

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.61  E-value=0.0093  Score=51.17  Aligned_cols=75  Identities=17%  Similarity=0.156  Sum_probs=49.0

Q ss_pred             EEEEecCCCcEEEEeecCC-----------eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEE
Q psy10348         61 ELKFHPQDFNLLLSVSKDH-----------TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKL  128 (291)
Q Consensus        61 ~~~~~~~~~~~l~s~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v  128 (291)
                      ..++.+.++++++.|+.+.           .+.+||..+++..........+.....++++..+++.++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            4566654677888877543           5889999887643221100223334445777889999999885 568999


Q ss_pred             EeccCch
Q psy10348        129 WDLTKPE  135 (291)
Q Consensus       129 ~d~~~~~  135 (291)
                      ||..+.+
T Consensus       270 yd~~t~~  276 (656)
T 1k3i_A          270 YDSSSDS  276 (656)
T ss_dssp             EEGGGTE
T ss_pred             ecCcCCc
Confidence            9987654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.60  E-value=0.016  Score=45.50  Aligned_cols=104  Identities=14%  Similarity=0.096  Sum_probs=59.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEe---eeccceeEEEEecC---CCcEEEEeecC----
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFY---GHGHAINELKFHPQ---DFNLLLSVSKD----   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~l~s~~~d----   78 (291)
                      ..-..++|.|++    .+++ +..+|.|++++  +++.  +..+.   ........|+|+|+   ++.+.++-..+    
T Consensus        31 ~~P~~ia~~pdG----~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~  103 (352)
T 2ism_A           31 EVPWALAFLPDG----GMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL  103 (352)
T ss_dssp             SCEEEEEECTTS----CEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred             CCceEEEEcCCC----eEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence            455789999998    3444 45669999998  3432  11111   11346789999993   24444444432    


Q ss_pred             -CeEEEEECCCcce---eeeecccc---CCCCceEEEEEccCCCEEEEEe
Q psy10348         79 -HTLRLWNIKTDIC---IAIFGGVE---GHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        79 -g~i~vwd~~~~~~---~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                       ..|..++...+..   ...+..+.   ........++|.|+|.+.++.+
T Consensus       104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence             5788888764321   11111112   1112335899999997655543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.57  E-value=0.016  Score=44.61  Aligned_cols=160  Identities=8%  Similarity=0.069  Sum_probs=100.2

Q ss_pred             EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-Eee----e--ccceeEEEE---ecCCCcEEEEee-------
Q psy10348         14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYG----H--GHAINELKF---HPQDFNLLLSVS-------   76 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~l~s~~-------   76 (291)
                      .+++|.+...   .++++.-..++|..|+...+..... +.+    .  ...+..|.|   .| ++.++++..       
T Consensus        16 E~~~wd~~~g---~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~   91 (334)
T 2p9w_A           16 EDTIYDRTRQ---VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNF   91 (334)
T ss_dssp             SCEEEETTTT---EEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCT
T ss_pred             cCccCcCCCC---EEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccc
Confidence            3678877542   3444444789999999976543332 211    0  113578999   58 677777543       


Q ss_pred             ------cCCeEEEEECC---CcceeeeeccccC-----------CCCceEEEEEccCCCEEEEEecC-CcEEEEeccCch
Q psy10348         77 ------KDHTLRLWNIK---TDICIAIFGGVEG-----------HRDEVLSADFDLLGTKIMSCGMD-HSLKLWDLTKPE  135 (291)
Q Consensus        77 ------~dg~i~vwd~~---~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~  135 (291)
                            .+..|..+|+.   +++.+.... +..           -......++..++|+..++++.. +.|..++.....
T Consensus        92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~d-L~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~  170 (334)
T 2p9w_A           92 ADQSSHGASSFHSFNLPLSENSKPVWSVN-FEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT  170 (334)
T ss_dssp             TSCCSSSCCEEEEEESSCCTTCCCSEEEE-SHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred             cccccCCCCEEEEEcCCcCCCCCEEEEec-CccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence                  26779999999   777665431 111           11347899999999998988887 777777665432


Q ss_pred             hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348        136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR  201 (291)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~  201 (291)
                       ...+..  .+ |                   ........+.++++  ++.|++....+.|..+|+..
T Consensus       171 -~~~~~~--~~-~-------------------~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          171 -VSTFAW--ES-G-------------------NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             -EEEEEE--CC-C-------------------CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             -Eeeeee--cC-C-------------------CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence             111110  00 0                   00122336678887  66777766699999999874

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.56  E-value=0.029  Score=47.66  Aligned_cols=202  Identities=6%  Similarity=-0.084  Sum_probs=110.4

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      -+....++|++...   .++.+-...+.|..++++.... ...+...-.....|++.+.+++++++-...+.|.+.++..
T Consensus        39 ~~~~~~ld~~~~~~---~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG  115 (619)
T 3s94_A           39 LEDAAAVDFVFSHG---LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG  115 (619)
T ss_dssp             CSCEEEEEEETTTT---EEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEEEeCCC---EEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence            34567888888653   3444445567888888865432 2223322256788999985556666666778999999874


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ......+   ...-.....+++.|.+.+|+.+..  .+.|...++..... ..+..                        
T Consensus       116 ~~~~~l~---~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~------------------------  167 (619)
T 3s94_A          116 SLRKVLF---WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN------------------------  167 (619)
T ss_dssp             CSCEEEE---CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC------------------------
T ss_pred             CCEEEEE---eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEe------------------------
Confidence            4332222   233445678999998766666653  34565555543221 11100                        


Q ss_pred             cccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        167 TRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                         ..-.....++++  ++ +.++-...+.|..+|+.......+         +.....+..     .++... +..+.+
T Consensus       168 ---~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~---------~~~~~~~P~-----gi~~~~-~~ly~t  229 (619)
T 3s94_A          168 ---SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV---------VKGSLPHPF-----ALTLFE-DILYWT  229 (619)
T ss_dssp             ---SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------CC-----CEEESS-SEEEEE
T ss_pred             ---CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE---------EeCCCCCce-----EEEEeC-CEEEEe
Confidence               012235677776  34 444445567888888865432110         110001111     234443 244444


Q ss_pred             EcCCCcEEEEEcCCCCC
Q psy10348        244 GNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~  260 (291)
                      -...+.|...|..+++.
T Consensus       230 d~~~~~V~~~d~~tg~~  246 (619)
T 3s94_A          230 DWSTHSILACNKYTGEG  246 (619)
T ss_dssp             CTTTCSEEEEESSSCCC
T ss_pred             cCCCCEEEEEECCCCcc
Confidence            45678899999887753

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.54  E-value=0.016  Score=44.21  Aligned_cols=187  Identities=12%  Similarity=0.066  Sum_probs=93.9

Q ss_pred             CEEEEec-CC-----CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC-----CeEEEEECCCcc---
Q psy10348         27 PLLAVAG-SR-----AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDI---   90 (291)
Q Consensus        27 ~~l~~~~-~d-----g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~---   90 (291)
                      .+++.|+ .+     ..+.+||+.+++-..  .+.. ...-.+++. . ++.+++.|+.+     ..+.+||+.+++   
T Consensus        16 ~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~   92 (301)
T 2vpj_A           16 VLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR-KRRYVASVS-L-HDRIYVIGGYDGRSRLSSVECLDYTADEDGV   92 (301)
T ss_dssp             EEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS-CCBSCEEEE-E-TTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred             EEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh-hhccccEEE-E-CCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence            4777777 33     478899987765322  1111 111122222 2 55777777765     358899988766   


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCC-----cEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-----SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .... ..+......-..+.+  ++..++.|+.++     .+.+||+.+.+-...-.     .|                 
T Consensus        93 W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----~p-----------------  147 (301)
T 2vpj_A           93 WYSV-APMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD-----MQ-----------------  147 (301)
T ss_dssp             CEEE-CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE-----CS-----------------
T ss_pred             eEEC-CCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCC-----CC-----------------
Confidence            3322 211222222222333  566677776543     47778876654221100     00                 


Q ss_pred             ccccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        166 STRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                          .....-.++.+.+.+++.|+.+     ..+.+||+.+..-.          .+..+........  ....  ++++
T Consensus       148 ----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~----------~~~~~p~~r~~~~--~~~~--~~~i  209 (301)
T 2vpj_A          148 ----TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT----------NVTPMATKRSGAG--VALL--NDHI  209 (301)
T ss_dssp             ----SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE----------EECCCSSCCBSCE--EEEE--TTEE
T ss_pred             ----CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE----------eCCCCCcccccce--EEEE--CCEE
Confidence                0111122333446666777654     45788887765321          1111111111111  1223  3778


Q ss_pred             EEEEcCC-----CcEEEEEcCCCC
Q psy10348        241 LAVGNQS-----GRTYVWDLDVQD  259 (291)
Q Consensus       241 l~~~~~d-----g~i~vwd~~~~~  259 (291)
                      ++.|+.+     ..+.+||+.+.+
T Consensus       210 ~v~GG~~~~~~~~~v~~yd~~~~~  233 (301)
T 2vpj_A          210 YVVGGFDGTAHLSSVEAYNIRTDS  233 (301)
T ss_dssp             EEECCBCSSSBCCCEEEEETTTTE
T ss_pred             EEEeCCCCCcccceEEEEeCCCCc
Confidence            8888764     468999998763

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.49  E-value=0.01  Score=45.53  Aligned_cols=187  Identities=11%  Similarity=0.052  Sum_probs=92.8

Q ss_pred             CEEEEecC----C-----CeEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeecC-----CeEEEEECCCcc
Q psy10348         27 PLLAVAGS----R-----AVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDI   90 (291)
Q Consensus        27 ~~l~~~~~----d-----g~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~   90 (291)
                      .+++.|+.    +     ..+.+||+.+.+-...  +... ..-.+++..  ++.+++.|+.+     ..+.+||+.+.+
T Consensus        72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~  148 (308)
T 1zgk_A           72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDE  148 (308)
T ss_dssp             EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred             EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence            47777765    2     4688888876643221  1111 111122222  55777777643     358889988765


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .... ..+......-..+.+  ++..++.|+.+     ..+.+||+.+.+-...-       +             .+  
T Consensus       149 W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-------~-------------~p--  203 (308)
T 1zgk_A          149 WHLV-APMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT-------A-------------MN--  203 (308)
T ss_dssp             EEEC-CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC-------C-------------CS--
T ss_pred             EeEC-CCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC-------C-------------CC--
Confidence            4332 111222222222333  56677777654     35778887665421100       0             00  


Q ss_pred             ccccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        166 STRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                          ........+.+.+.+++.|+.+     ..+.+||+.+..-..          +..+........  ....+  +++
T Consensus       204 ----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~~--~~i  265 (308)
T 1zgk_A          204 ----TIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTF----------VAPMKHRRSALG--ITVHQ--GRI  265 (308)
T ss_dssp             ----SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE----------CCCCSSCCBSCE--EEEET--TEE
T ss_pred             ----CccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEE----------CCCCCCCccceE--EEEEC--CEE
Confidence                0111122334456677777654     468889887653211          111111111111  12223  778


Q ss_pred             EEEEcCC-----CcEEEEEcCCCC
Q psy10348        241 LAVGNQS-----GRTYVWDLDVQD  259 (291)
Q Consensus       241 l~~~~~d-----g~i~vwd~~~~~  259 (291)
                      ++.|+.+     ..+.+||+.+.+
T Consensus       266 ~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          266 YVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             EEECCBCSSCBCCEEEEEETTTTE
T ss_pred             EEEcCcCCCcccceEEEEcCCCCE
Confidence            8888754     357888888763

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.47  E-value=0.0012  Score=57.02  Aligned_cols=97  Identities=7%  Similarity=-0.015  Sum_probs=56.9

Q ss_pred             CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC----cceeeeeccccCCCCceEEEEE
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT----DICIAIFGGVEGHRDEVLSADF  110 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~i~~~~~  110 (291)
                      .+.|+..++.+.+....+.. ...+..|+|.+.++.++++-...+.|+.+++..    ......+   .........+++
T Consensus       385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i---~~~~~~P~glav  460 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQAPDGLAV  460 (699)
T ss_dssp             TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC---CSCC--CCCEEC
T ss_pred             ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE---eCCCCCcceEEE
Confidence            35788888876655443332 345678999984445555545668899999875    1222222   112233456788


Q ss_pred             ccCCCEEE-EEecCCcEEEEeccCch
Q psy10348        111 DLLGTKIM-SCGMDHSLKLWDLTKPE  135 (291)
Q Consensus       111 ~~~~~~l~-~~~~d~~i~v~d~~~~~  135 (291)
                      .+.+..|+ +-...+.|.++++....
T Consensus       461 D~~~g~LY~tD~~~~~I~v~d~dg~~  486 (699)
T 1n7d_A          461 DWIHSNIYWTDSVLGTVSVADTKGVK  486 (699)
T ss_dssp             CCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred             EeeCCcEEEEeccCCeEEEEecCCCc
Confidence            76554444 44457889999876543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.46  E-value=0.03  Score=45.28  Aligned_cols=115  Identities=12%  Similarity=0.113  Sum_probs=71.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecC-CC----eEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGS-RA----VIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~-dg----~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      .....++|++++    ++|+++.. ++    .+.+.+. .+...  ..+.. ......++++|.++.++++-..++.|..
T Consensus       179 ~~P~~ia~d~~G----~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~  252 (430)
T 3tc9_A          179 SKVRTICWTHEA----DSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFR  252 (430)
T ss_dssp             SCEEEEEECTTS----SEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred             CCcceEEEeCCC----CEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEE
Confidence            446778888887    44555543 22    3333443 33322  23332 3446788999966666666667789999


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccC
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTK  133 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~  133 (291)
                      ++...+.......  .........++|+|++++|+.+ ...+.|..++...
T Consensus       253 ~~~~~~~~~~~~~--~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          253 YDFTTQETTPLFT--IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             EETTTTEEEEEEE--CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             EECCCCcEEEEEE--cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence            9988655422221  1223456889999999955555 4578899988764

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.46  E-value=0.065  Score=49.06  Aligned_cols=178  Identities=10%  Similarity=0.083  Sum_probs=101.4

Q ss_pred             eEEEEccCCcceeEEEe-eeccceeEEE---EecCCCcEEEEee----------cCCeEEEEECCCcceeeeeccccCCC
Q psy10348         37 VIRIFSPAFHACVRHFY-GHGHAINELK---FHPQDFNLLLSVS----------KDHTLRLWNIKTDICIAIFGGVEGHR  102 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~-~~~~~v~~~~---~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~  102 (291)
                      .|++.|..+.+.+..++ .....+.+++   |......+|+.|.          ..|.|.++++..++ +..+.. ...+
T Consensus       808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~-~~v~  885 (1158)
T 3ei3_A          808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAE-KEVK  885 (1158)
T ss_dssp             EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEE-EEES
T ss_pred             EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEE-EEcC
Confidence            47777777777665554 1223445544   3332346888875          35889999987443 333321 3456


Q ss_pred             CceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc-ceeEEEEc
Q psy10348        103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN-YVDCVRWL  181 (291)
Q Consensus       103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~  181 (291)
                      ++|++++-- +| +|++|- ...+++|++...+.+. ...                          ..+.. .+..+...
T Consensus       886 g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~-~~~--------------------------~~~~~i~~~~l~~~  935 (1158)
T 3ei3_A          886 GAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELR-TEC--------------------------NHYNNIMALYLKTK  935 (1158)
T ss_dssp             SCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEE-EEE--------------------------EECCCSCEEEEEEE
T ss_pred             CcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEE-EEe--------------------------eccccEEEEEEecc
Confidence            788888744 35 455444 4789999997654322 100                          00111 12344445


Q ss_pred             CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348        182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~  258 (291)
                      +++++.|..-..+.+...+....           .+..+.....+.+..+..+-. ...++.+..+|.+.+......
T Consensus       936 ~~~I~vgD~~~Sv~~~~y~~~~~-----------~L~~~a~D~~~~~vta~~~ld-~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A          936 GDFILVGDLMRSVLLLAYKPMEG-----------NFEEIARDFNPNWMSAVEILD-DDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp             TTEEEEEESSBCEEEEEEETTTT-----------EEEEEEECCSCBCEEEEEEEE-TTEEEEEETTSEEEEEEECTT
T ss_pred             CCEEEEEEhhheEEEEEEEcCCC-----------eEEEEEeecccccEEEEEEEc-cCcEEEEcCCCcEEEEecCCC
Confidence            88999998877777765433221           133333233333333333311 457888999999999987653

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.42  E-value=0.02  Score=43.90  Aligned_cols=187  Identities=14%  Similarity=0.085  Sum_probs=92.9

Q ss_pred             CEEEEecCC----CeEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeec----C-----CeEEEEECCCcce
Q psy10348         27 PLLAVAGSR----AVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSK----D-----HTLRLWNIKTDIC   91 (291)
Q Consensus        27 ~~l~~~~~d----g~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~----d-----g~i~vwd~~~~~~   91 (291)
                      .+++.|+.+    ..+.+||..+++-...  +.. ...-.+++..  ++.+++.|+.    +     ..+.+||+.+.+.
T Consensus        26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W  102 (308)
T 1zgk_A           26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQV-PRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW  102 (308)
T ss_dssp             CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred             EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCc-ccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence            577777742    4688999877653221  111 0111122222  5577777765    2     3588899887654


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      ... ..+......-..+.+  ++..++.|+.+     ..+.+||+.+.+-...-.                    .+   
T Consensus       103 ~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--------------------~p---  156 (308)
T 1zgk_A          103 SPC-APMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP--------------------ML---  156 (308)
T ss_dssp             EEC-CCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCC--------------------CS---
T ss_pred             eEC-CCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC--------------------CC---
Confidence            332 111222222222333  56667776643     357778876654211100                    00   


Q ss_pred             cccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        167 TRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                         .....-..+.+.+.+++.|+.+     ..+.+||+.+..-..          +..+........  ....  +++++
T Consensus       157 ---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~--~~~iy  219 (308)
T 1zgk_A          157 ---TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM----------ITAMNTIRSGAG--VCVL--HNCIY  219 (308)
T ss_dssp             ---SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE----------CCCCSSCCBSCE--EEEE--TTEEE
T ss_pred             ---ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEee----------CCCCCCccccce--EEEE--CCEEE
Confidence               0111112333446666766654     457888876653211          111111111111  1222  37788


Q ss_pred             EEEcCC-----CcEEEEEcCCCC
Q psy10348        242 AVGNQS-----GRTYVWDLDVQD  259 (291)
Q Consensus       242 ~~~~~d-----g~i~vwd~~~~~  259 (291)
                      +.|+.+     ..+.+||+.+.+
T Consensus       220 v~GG~~~~~~~~~v~~yd~~~~~  242 (308)
T 1zgk_A          220 AAGGYDGQDQLNSVERYDVETET  242 (308)
T ss_dssp             EECCBCSSSBCCCEEEEETTTTE
T ss_pred             EEeCCCCCCccceEEEEeCCCCc
Confidence            888764     468999988753

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.35  E-value=0.014  Score=44.91  Aligned_cols=103  Identities=8%  Similarity=-0.035  Sum_probs=52.5

Q ss_pred             CEEEEecC----C-------CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC--------CeEEEEE
Q psy10348         27 PLLAVAGS----R-------AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD--------HTLRLWN   85 (291)
Q Consensus        27 ~~l~~~~~----d-------g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d--------g~i~vwd   85 (291)
                      .+++.|+.    +       ..+.+||..+++-..  .+.. ...-.+++..  ++.+++.|+.+        ..+.+||
T Consensus        47 ~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d  123 (315)
T 4asc_A           47 QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS-PRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYD  123 (315)
T ss_dssp             CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS-CEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred             EEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc-chhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEEC
Confidence            57777773    1       237788887765321  1110 0111122222  45777777642        3588999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-C-----CcEEEEeccCch
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-D-----HSLKLWDLTKPE  135 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-----~~i~v~d~~~~~  135 (291)
                      ..+++.... ..+......-..+.  -+++.++.|+. +     ..+.+||+.+.+
T Consensus       124 ~~~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  176 (315)
T 4asc_A          124 RLSFKWGES-DPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE  176 (315)
T ss_dssp             TTTTEEEEC-CCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred             CCCCcEeEC-CCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence            987654322 11122222222222  35666777765 2     357888877654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.34  E-value=0.031  Score=42.75  Aligned_cols=103  Identities=16%  Similarity=0.144  Sum_probs=56.3

Q ss_pred             CEEEEecC--CCeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC----CeEEEEECCCcceeeeeccc
Q psy10348         27 PLLAVAGS--RAVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD----HTLRLWNIKTDICIAIFGGV   98 (291)
Q Consensus        27 ~~l~~~~~--dg~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~   98 (291)
                      .+++.|+.  ...+.+||..+++-..  .+...... .+++. - ++.+++.|+.+    ..+.+||+.+++.... ..+
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~~   88 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVF-W-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK-LGP   88 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEE-E-TTEEEEECCBSSSBCCEEEEEETTTTEEEEE-ECC
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEE-E-CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC-CCC
Confidence            36666665  3578899988765322  11111111 12222 2 55777887755    5688999987754332 111


Q ss_pred             cCCCCceEEEEEccCCCEEEEEecC------CcEEEEeccCch
Q psy10348         99 EGHRDEVLSADFDLLGTKIMSCGMD------HSLKLWDLTKPE  135 (291)
Q Consensus        99 ~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~  135 (291)
                      ......-..+.+  ++..++.|+.+      ..+.+||+.+.+
T Consensus        89 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~  129 (306)
T 3ii7_A           89 PTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES  129 (306)
T ss_dssp             SSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred             CccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence            222222222222  56677777765      457888877654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.33  E-value=0.031  Score=42.64  Aligned_cols=187  Identities=12%  Similarity=0.128  Sum_probs=92.7

Q ss_pred             CEEEEecCC----CeEEEEccCCcceeEEEeee-cc-ceeEEEEecCCCcEEEEeecCC-----eEEEEECCCcceeeee
Q psy10348         27 PLLAVAGSR----AVIRIFSPAFHACVRHFYGH-GH-AINELKFHPQDFNLLLSVSKDH-----TLRLWNIKTDICIAIF   95 (291)
Q Consensus        27 ~~l~~~~~d----g~i~vw~~~~~~~~~~~~~~-~~-~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~   95 (291)
                      .+++.|+.+    ..+..||+.+.+-.. +... .. .-.+++..  ++.+++.|+.++     .+.+||..+.+.... 
T Consensus        17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-   92 (302)
T 2xn4_A           17 LMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-   92 (302)
T ss_dssp             EEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-
T ss_pred             EEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC-
Confidence            367777654    468889988765322 2111 11 11122222  557777777553     588899887654332 


Q ss_pred             ccccCCCCceEEEEEccCCCEEEEEecCC-----cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         96 GGVEGHRDEVLSADFDLLGTKIMSCGMDH-----SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      ..+......-..+.+  ++..++.|+.++     .+.+||+.+.+-...-       +             .+      .
T Consensus        93 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-------~-------------~p------~  144 (302)
T 2xn4_A           93 ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-------P-------------MN------T  144 (302)
T ss_dssp             CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-------C-------------CS------S
T ss_pred             CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-------C-------------CC------C
Confidence            111222222222322  566777777654     4667777654421110       0             00      0


Q ss_pred             cCcceeEEEEcCCEEEEecCC-------CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        171 HRNYVDCVRWLGDFVLSKSCE-------NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       171 ~~~~v~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      .......+.+.+.+++.|+.+       ..+.+||+.+..-.          .+..+........  ....+  +++++.
T Consensus       145 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~----------~~~~~p~~r~~~~--~~~~~--~~iyv~  210 (302)
T 2xn4_A          145 RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT----------YIAEMSTRRSGAG--VGVLN--NLLYAV  210 (302)
T ss_dssp             CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE----------EECCCSSCCBSCE--EEEET--TEEEEE
T ss_pred             cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE----------ECCCCcccccccc--EEEEC--CEEEEE
Confidence            111122333446666666643       35788888765321          1111111111111  12233  788888


Q ss_pred             EcCC-----CcEEEEEcCCCC
Q psy10348        244 GNQS-----GRTYVWDLDVQD  259 (291)
Q Consensus       244 ~~~d-----g~i~vwd~~~~~  259 (291)
                      |+.+     ..+.+||+.+.+
T Consensus       211 GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          211 GGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             CCBSSSSBCCCEEEEETTTTE
T ss_pred             CCCCCCcccceEEEEeCCCCC
Confidence            8764     368899988753

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.31  E-value=0.02  Score=44.48  Aligned_cols=115  Identities=10%  Similarity=0.040  Sum_probs=73.5

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEe--cCCCcEEEEe-ecCCeEEEEECCCcceeeeecccc-CCC
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFH--PQDFNLLLSV-SKDHTLRLWNIKTDICIAIFGGVE-GHR  102 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~--~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~-~~~  102 (291)
                      ++++++.||.|.-.|.++|+.+.+++... .++....-.  +.++..++.. ..||.|..++..+|.....+..-. -..
T Consensus        12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~   91 (339)
T 2be1_A           12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST   91 (339)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence            89999999999999999999998887431 222221100  1123444443 689999999998886554432100 011


Q ss_pred             CceEE---EEE-----ccCCCEEEEEecCCcEEEEeccCchhhhhhcc
Q psy10348        103 DEVLS---ADF-----DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE  142 (291)
Q Consensus       103 ~~i~~---~~~-----~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~  142 (291)
                      .++..   ...     ...+..+++|+.+|.+...|+++|+.+..+..
T Consensus        92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~  139 (339)
T 2be1_A           92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP  139 (339)
T ss_dssp             CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred             cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence            22221   000     01456889999999999999999998877653

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.28  E-value=0.029  Score=43.23  Aligned_cols=103  Identities=10%  Similarity=0.020  Sum_probs=51.4

Q ss_pred             CEEEEecC----CC-------eEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeecC-------CeEEEEEC
Q psy10348         27 PLLAVAGS----RA-------VIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKD-------HTLRLWNI   86 (291)
Q Consensus        27 ~~l~~~~~----dg-------~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-------g~i~vwd~   86 (291)
                      .+++.|+.    ++       .+.+||..+++-...  +.. ...-.+++..  ++.+++.|+.+       ..+.+||.
T Consensus        58 ~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~  134 (318)
T 2woz_A           58 QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS-ARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDP  134 (318)
T ss_dssp             CEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS-CBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred             EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc-cccccceEEE--CCEEEEEcCccCCCCcccceEEEEeC
Confidence            57777773    12       277788776543221  111 1111222222  45777777754       24788898


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEEEec------CCcEEEEeccCch
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM------DHSLKLWDLTKPE  135 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~  135 (291)
                      .+.+....- .+......-..+.  .++..++.|+.      -..+.+||+.+.+
T Consensus       135 ~~~~W~~~~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          135 VAAKWSEVK-NLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             TTTEEEEEC-CCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             CCCCEeECC-CCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            876544321 1111111112222  35666666664      2358888887654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.24  E-value=0.029  Score=46.01  Aligned_cols=66  Identities=12%  Similarity=0.097  Sum_probs=42.9

Q ss_pred             eeEEEEecC-CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEE-------ccCCCEEEEEecCC
Q psy10348         59 INELKFHPQ-DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADF-------DLLGTKIMSCGMDH  124 (291)
Q Consensus        59 v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~d~  124 (291)
                      ...|+|.|. .++++++-...+.|++.|++++........-.........++|       ++++.+|+++...+
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~  214 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD  214 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence            357899983 4455555554567999998876655444210112346899999       99999777776544

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.18  E-value=0.052  Score=42.07  Aligned_cols=107  Identities=7%  Similarity=-0.066  Sum_probs=60.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEE-EEccCCcceeEEE-eeeccceeEEEEecCCCcEEEEeecCCeEE-EEECC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIR-IFSPAFHACVRHF-YGHGHAINELKFHPQDFNLLLSVSKDHTLR-LWNIK   87 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~-vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~-vwd~~   87 (291)
                      ..+..+.+.+++    ..++++ .+|.|. -.|  .|+.-..+ ......+..+.+.+ ++.+++.+. +|.+. -+|- 
T Consensus       122 ~~~~~i~~~~~~----~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~-  191 (327)
T 2xbg_A          122 GSPRLIKALGNG----SAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEP-  191 (327)
T ss_dssp             SCEEEEEEEETT----EEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECT-TSCEEEEET-TSSEEEEECT-
T ss_pred             CCeEEEEEECCC----CEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCC-
Confidence            346777777665    355555 455443 223  23322222 23456788999998 777777664 44443 3332 


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD  130 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d  130 (291)
                      .+..-..+.  ......+..+.+.+++..+ .++.+|.+++.+
T Consensus       192 gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~  231 (327)
T 2xbg_A          192 GQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSD  231 (327)
T ss_dssp             TCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEE
T ss_pred             CCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEec
Confidence            122222221  2455678899999988655 455578777764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.18  E-value=0.061  Score=42.88  Aligned_cols=121  Identities=10%  Similarity=0.040  Sum_probs=71.4

Q ss_pred             CCcEEEEeecCCeEEEEECCCcceeeeeccccC--CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccc
Q psy10348         68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG--HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~  145 (291)
                      ++..++.+- ++.||.-++..+...+.+.. ..  .-..|..+..+|+|.+|+..+ +..|.|..+..+.....-. .. 
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~-~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~-~~-  105 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNF-SRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV-SI-  105 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSCEEEEC-TTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH-HH-
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcceEEec-CcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc-cc-
Confidence            455555543 46788878775444444421 11  123678899999999999887 5689999987432111000 00 


Q ss_pred             cCCCCccccccCccccCcccccc-cccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCC
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTR-DIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~  202 (291)
                            .   ...+...-.+... .....+|..+.|+     +..|++-..|+.|++||+...
T Consensus       106 ------~---~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s  159 (452)
T 3pbp_A          106 ------Q---DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS  159 (452)
T ss_dssp             ------H---HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred             ------c---cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence                  0   0000000000000 1146789999998     558899999999999999863

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.10  E-value=0.029  Score=43.56  Aligned_cols=121  Identities=13%  Similarity=0.168  Sum_probs=80.2

Q ss_pred             ceeEEEEe--eeccCCCCCEEEEecCCCeEEEEccC-------CcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348         11 ENFYTCAW--SMDLESGRPLLAVAGSRAVIRIFSPA-------FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus        11 ~~i~~~~~--s~~~~~~~~~l~~~~~dg~i~vw~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      ..++.+++  +|..  +..++++...+|.+..|++.       +.+.++++.. .+.+..+...+ ....|+.+-++.-|
T Consensus       128 ~~pyGlcly~~~~~--g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd-~~g~Lyv~eEd~GI  203 (355)
T 3amr_A          128 NEVYGFTLYHSQKT--GKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD-EYGRLYIAEEDEAI  203 (355)
T ss_dssp             SSCCCEEEEECTTT--CCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET-TTTEEEEEETTTEE
T ss_pred             CCeeEEEEEecCCC--CcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC-CCCeEEEecccceE
Confidence            55666777  4432  11368888889999999882       3456677764 45788899998 77888888888666


Q ss_pred             EEEECC-----CcceeeeeccccCCCCceEEEEE--ccCCC-EEEEEe-cCCcEEEEecc-Cchh
Q psy10348         82 RLWNIK-----TDICIAIFGGVEGHRDEVLSADF--DLLGT-KIMSCG-MDHSLKLWDLT-KPEI  136 (291)
Q Consensus        82 ~vwd~~-----~~~~~~~~~~~~~~~~~i~~~~~--~~~~~-~l~~~~-~d~~i~v~d~~-~~~~  136 (291)
                      ..++.+     +++.+..+. .......+..|++  .++++ +|++++ .+.++.+||.+ +.+.
T Consensus       204 w~~da~p~~~~~~~~v~~~~-~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~  267 (355)
T 3amr_A          204 WKFSAEPDGGSNGTVIDRAD-GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKY  267 (355)
T ss_dssp             EEEECSTTSCSCCEEEEEBS-SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred             EEEeCCcCCCCCceEEEEec-CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence            666754     234444431 1222346888887  45556 677666 47899999986 4443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.06  E-value=0.08  Score=42.23  Aligned_cols=149  Identities=13%  Similarity=0.158  Sum_probs=89.7

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeee----ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce------------
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGH----GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC------------   91 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~------------   91 (291)
                      .++.+- ++.||.-++..+...+.+...    -..|..+..+| +|++||..+ +..|.|-.+..+..            
T Consensus        34 ~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q  110 (452)
T 3pbp_A           34 RIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQ  110 (452)
T ss_dssp             EEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTE
T ss_pred             EEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccccc
Confidence            344432 367887777644445555532    12678899999 999999976 46788888773321            


Q ss_pred             eeeec--ccc-CCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         92 IAIFG--GVE-GHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        92 ~~~~~--~~~-~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .+.+.  ... ....+|..+.|+|-   +..|++-..|+.|++||+........     .++            .....+
T Consensus       111 ~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-----~L~------------k~~~~f  173 (452)
T 3pbp_A          111 IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-----VLN------------KPNNSF  173 (452)
T ss_dssp             EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-----EES------------CCCSEE
T ss_pred             eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-----chh------------cccccc
Confidence            11221  001 13578999999995   55899999999999999987321111     000            000011


Q ss_pred             ccccccCcceeEEEEcCC----EEEEecCCCeEEEe
Q psy10348        166 STRDIHRNYVDCVRWLGD----FVLSKSCENCIICW  197 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~~~----~l~~~~~d~~i~iw  197 (291)
                       ..+.....|.+++|.++    |+++.+.+|-|.-.
T Consensus       174 -g~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          174 -GLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             -ESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             -CCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence             11224466888999722    44445677877653

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.73  E-value=0.16  Score=40.68  Aligned_cols=204  Identities=9%  Similarity=0.120  Sum_probs=117.7

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-ceeee
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAI   94 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~   94 (291)
                      ...+|..    +.+|.=. ..++.|+|+++.+.++.+.- ...|.-=.|-. + +.|+-.+ +..|+-|++... .+.+.
T Consensus        71 AIMnP~~----~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis-~-~~l~lVT-~taVyHWsi~~~s~P~kv  141 (494)
T 1bpo_A           71 AIMNPAS----KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-L-NTVALVT-DNAVYHWSMEGESQPVKM  141 (494)
T ss_dssp             EEECSSS----SCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEE-T-TEEEEEC-SSEEEEEESSSSCCCEEE
T ss_pred             eeeCCCC----cEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecC-C-CeEEEEc-CCeeEEecccCCCCchhh
Confidence            3455655    4666665 57999999999888877764 45677777764 3 4555544 467999999743 45555


Q ss_pred             eccccC-CCCceEEEEEccCCCEEEEEec-------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         95 FGGVEG-HRDEVLSADFDLLGTKIMSCGM-------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        95 ~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +..... ....|..-..+++.++++..+-       .|.+.+|..+....                             .
T Consensus       142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-----------------------------Q  192 (494)
T 1bpo_A          142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-----------------------------Q  192 (494)
T ss_dssp             EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-----------------------------E
T ss_pred             eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-----------------------------c
Confidence            531111 1356777778888887765432       46677777665431                             1


Q ss_pred             cccccCcceeEEEEcCC-----EEEEecC---CCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecCC
Q psy10348        167 TRDIHRNYVDCVRWLGD-----FVLSKSC---ENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~-----~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~  237 (291)
                      ..++|.+....+...|+     +++.+..   .+.+++-++....... .+..  .+.+.-+ ......-.-+++..++.
T Consensus       193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~-~~f~--kk~vdv~fppe~~~DFPvamqvs~k  269 (494)
T 1bpo_A          193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFP--KKAVDVFFPPEAQNDFPVAMQISEK  269 (494)
T ss_dssp             EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC-CCCC--CEEEECCCCTTSTTCCEEEEEEETT
T ss_pred             hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC-CCcc--ceeeeeeCCcccccCceeEEEeccc
Confidence            12334443333333321     2222222   3789999986541100 0000  0111111 11111112234555566


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      -..++.-+.-|.|.+||+.++.+
T Consensus       270 ygviyviTK~G~i~lyDleTgt~  292 (494)
T 1bpo_A          270 HDVVFLITKYGYIHLYDLETGTC  292 (494)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCE
T ss_pred             CCEEEEEecCceEEEEeccccee
Confidence            88899999999999999999863

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.65  E-value=0.16  Score=39.65  Aligned_cols=23  Identities=9%  Similarity=0.284  Sum_probs=15.2

Q ss_pred             CcEEEEEcCCC------cEEEEEcCCCCC
Q psy10348        238 QKILAVGNQSG------RTYVWDLDVQDP  260 (291)
Q Consensus       238 ~~~l~~~~~dg------~i~vwd~~~~~~  260 (291)
                      +++++.|+.++      .|.++++++++.
T Consensus       317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~  345 (357)
T 2uvk_A          317 NSLLIIGGETAGGKAVTDSVLITVKDNKV  345 (357)
T ss_dssp             TEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred             CEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence            78888888543      366668887764

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.29  E-value=0.44  Score=40.59  Aligned_cols=201  Identities=6%  Similarity=-0.063  Sum_probs=112.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee------eccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG------HGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ..+.+++|.+...   .++.+=...+.|+.++.+.......+..      ....+..|++....+++..+-+..+.|.+.
T Consensus       340 ~~~~~ld~d~~~~---~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~  416 (628)
T 4a0p_A          340 RNVRAIDYDPLDK---QLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVT  416 (628)
T ss_dssp             SCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CCceEEEEecCCC---eEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEE
Confidence            5577888887653   3444445567888888764333333322      234578999988445566677778899999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      ++. |+....+.  .........+++.|...+|+.+.. ..  .|...++.... ...+.                    
T Consensus       417 ~~~-G~~~~~l~--~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~-~~~l~--------------------  472 (628)
T 4a0p_A          417 RLD-GRSVGVVL--KGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE-REVLF--------------------  472 (628)
T ss_dssp             ETT-SCEEEEEE--ECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS-CEEEE--------------------
T ss_pred             ECC-CCeEEEEE--eCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC-cEEEE--------------------
Confidence            986 55544441  234466899999995555554433 22  45555544322 11110                    


Q ss_pred             CcccccccccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                             ...-...+.++++  .+.|+.+ +..+.|...++.....          +.+..  ........++  ... +
T Consensus       473 -------~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r----------~~~~~--~~~~~P~gla--v~~-~  530 (628)
T 4a0p_A          473 -------FSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANR----------IVLED--SNILQPVGLT--VFE-N  530 (628)
T ss_dssp             -------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEC--SSCSCEEEEE--EET-T
T ss_pred             -------eccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCce----------EEEEc--CCCCCcEEEE--EEC-C
Confidence                   0012235677777  4455544 4468899998865432          11211  1111223333  332 4


Q ss_pred             cEEEEEcCCCcEEEEEcCCCCC
Q psy10348        239 KILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       239 ~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      .++.+=...+.|...|..+++.
T Consensus       531 ~ly~tD~~~~~i~~~~k~~G~~  552 (628)
T 4a0p_A          531 WLYWIDKQQQMIEKIDMTGREG  552 (628)
T ss_dssp             EEEEEETTTTEEEEEETTSSSC
T ss_pred             EEEEEECCCCeEEEEECcCCCC
Confidence            5555555677888888877653

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.14  E-value=0.36  Score=44.84  Aligned_cols=198  Identities=11%  Similarity=0.200  Sum_probs=107.1

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-ceeeeeccccCC----
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAIFGGVEGH----  101 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~----  101 (291)
                      +.+|.=. ..++.|+|+++...++.+.- ..+|.-=.|-.  .+.|+-.+ +..|.-|++... .+.+.+   ..|    
T Consensus        78 ~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~~s~P~k~f---dR~~~L~  149 (1630)
T 1xi4_A           78 KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMF---DRHSSLA  149 (1630)
T ss_pred             ceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecC--CCeeEEEc-CCeEEEeccCCCCccHHHH---hcchhcc
Confidence            4666654 57899999998887776653 45566667764  24555544 457999999742 344444   233    


Q ss_pred             CCceEEEEEccCCCEEEEEe-------cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc--c--c
Q psy10348        102 RDEVLSADFDLLGTKIMSCG-------MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR--D--I  170 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~-------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~  170 (291)
                      ...|..-..+++.++++..|       ..|.+.+|..+.+... .+..                  +...|...  .  .
T Consensus       150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~ieg------------------ha~~F~~~~~~~~~  210 (1630)
T 1xi4_A          150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEG------------------HAASFAQFKMEGNA  210 (1630)
T ss_pred             cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhH------------------hHhhhheeccCCCC
Confidence            45677777788888776443       3577888877654321 1111                  00000000  0  0


Q ss_pred             cCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee-ecCCcccEEEEEEEecCCCcEEEEEcCCCc
Q psy10348        171 HRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR-LNFKDCEIWFIRFSMDYWQKILAVGNQSGR  249 (291)
Q Consensus       171 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~  249 (291)
                      +...+.|.+...      ...+.++|-++....... .+...  +.+.- +......-.-+++..++.-..+..-+.-|.
T Consensus       211 ~~~~l~~f~~~~------~~g~kLhi~Ei~~~~~~~-~~f~k--k~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~  281 (1630)
T 1xi4_A          211 EESTLFCFAVRG------QAGGKLHIIEVGTPPTGN-QPFPK--KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY  281 (1630)
T ss_pred             CCceEEEEEEec------CCCceEEEEecCCCccCC-CCCcc--ccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence            112222222211      113688888886541100 00000  00111 111101111234455566788888999999


Q ss_pred             EEEEEcCCCCC
Q psy10348        250 TYVWDLDVQDP  260 (291)
Q Consensus       250 i~vwd~~~~~~  260 (291)
                      |.+||+.++.+
T Consensus       282 ~~~~d~~t~~~  292 (1630)
T 1xi4_A          282 IHLYDLETGTC  292 (1630)
T ss_pred             EEEEecccchh
Confidence            99999999864

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.07  E-value=0.34  Score=37.17  Aligned_cols=101  Identities=9%  Similarity=0.023  Sum_probs=51.4

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeee--ccceeEEEEecCCCcEEEEeec----CC-------eEEEEECCCcceeee
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGH--GHAINELKFHPQDFNLLLSVSK----DH-------TLRLWNIKTDICIAI   94 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~----dg-------~i~vwd~~~~~~~~~   94 (291)
                      +++.|+.  .+..||..+++-.. ....  ........... ++.+++.|+.    ++       .+.+||..+++....
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~   93 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL   93 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred             hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence            5556654  48899998876443 2111  11111222233 6677777773    12       177888877654332


Q ss_pred             eccccCCCCceEEEEEccCCCEEEEEecC-------CcEEEEeccCch
Q psy10348         95 FGGVEGHRDEVLSADFDLLGTKIMSCGMD-------HSLKLWDLTKPE  135 (291)
Q Consensus        95 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~  135 (291)
                       ..+......-..+.+  ++..++.|+.+       ..+.+||+.+.+
T Consensus        94 -~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~  138 (318)
T 2woz_A           94 -PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK  138 (318)
T ss_dssp             -SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE
T ss_pred             -CCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC
Confidence             111222222222222  56677777754       246777776554

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.06  E-value=0.34  Score=37.09  Aligned_cols=185  Identities=10%  Similarity=0.083  Sum_probs=90.8

Q ss_pred             EEEEecCCCeEEEEccCCcceeE-EEeeeccceeEEEEecCCCcEEEEeec----C-------CeEEEEECCCcceeeee
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVR-HFYGHGHAINELKFHPQDFNLLLSVSK----D-------HTLRLWNIKTDICIAIF   95 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~----d-------g~i~vwd~~~~~~~~~~   95 (291)
                      +++.|+  ..+.+||..+++-.. .+.............. ++.+++.|+.    +       ..+.+||..+++... +
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~   82 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M   82 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred             EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence            556666  579999998876432 1111111122222233 6677777773    1       127788888765432 2


Q ss_pred             ccccCCCCceEEEEEccCCCEEEEEecC--------CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         96 GGVEGHRDEVLSADFDLLGTKIMSCGMD--------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      ..+......-..+.+  ++..++.|+.+        ..+.+||+.+.+-...-       +             .+    
T Consensus        83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-------~-------------~p----  136 (315)
T 4asc_A           83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-------P-------------LP----  136 (315)
T ss_dssp             CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-------C-------------CS----
T ss_pred             CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-------C-------------CC----
Confidence            111211111122222  55666666642        34778887765421100       0             00    


Q ss_pred             ccccCcceeEEEEcCCEEEEecC-C-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348        168 RDIHRNYVDCVRWLGDFVLSKSC-E-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL  241 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l~~~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l  241 (291)
                        .....-..+.+.+.+++.|+. +     ..+.+||..+..-..          +..+........  ....  +++++
T Consensus       137 --~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~--~~~iy  200 (315)
T 4asc_A          137 --YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE----------LAPMQTARSLFG--ATVH--DGRII  200 (315)
T ss_dssp             --SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEE----------CCCCSSCCBSCE--EEEE--TTEEE
T ss_pred             --CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEE----------CCCCCCchhceE--EEEE--CCEEE
Confidence              011112233344666677765 2     468888887653211          111111111111  1223  37788


Q ss_pred             EEEcCCC-----cEEEEEcCCC
Q psy10348        242 AVGNQSG-----RTYVWDLDVQ  258 (291)
Q Consensus       242 ~~~~~dg-----~i~vwd~~~~  258 (291)
                      +.|+.++     .+.+||+.+.
T Consensus       201 v~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          201 VAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             EEEEECSSSEEEEEEEEETTTT
T ss_pred             EEeccCCCCccceEEEEECCCC
Confidence            8887654     5888888775

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.04  E-value=0.39  Score=37.62  Aligned_cols=106  Identities=12%  Similarity=0.093  Sum_probs=58.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE---E----eeeccceeEEEEecC---CCcEEEEeec---
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH---F----YGHGHAINELKFHPQ---DFNLLLSVSK---   77 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~l~s~~~---   77 (291)
                      .....++|.|++    ..|+++...|.|++++.. ++....   +    .........|+++|+   ++.+.++-..   
T Consensus        18 ~~P~~i~~~pdG----~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~   92 (353)
T 2g8s_A           18 DHPWALAFLPDN----HGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD   92 (353)
T ss_dssp             SSEEEEEECSTT----CCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred             CCcEEEEEcCCC----CEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence            456789999988    425566678999999854 332111   1    111345688999993   3444444332   


Q ss_pred             ----CCeEEEEECCCc--c--eee-eecccc---CCCCceEEEEEccCCCEEEEEe
Q psy10348         78 ----DHTLRLWNIKTD--I--CIA-IFGGVE---GHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        78 ----dg~i~vwd~~~~--~--~~~-~~~~~~---~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                          ...|..+++..+  .  ... .+..+.   ........++|.|+|.+.++.+
T Consensus        93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A           93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred             CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence                235666666432  1  111 111111   1112235799999996555543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.01  E-value=0.021  Score=41.14  Aligned_cols=106  Identities=15%  Similarity=-0.016  Sum_probs=63.9

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce------eEEEee-eccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC------VRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRL   83 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~v   83 (291)
                      ..+..++|+|++    .+.++  .+|.++-.+..+...      -..+-. --..-.++.|.| ++.+.++  .||.|.-
T Consensus        41 ~~~~~laf~P~G----~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr  111 (236)
T 1tl2_A           41 SNFKFLFLSPGG----ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYK  111 (236)
T ss_dssp             TTCSEEEECTTS----CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEE
T ss_pred             ccceeEEECCCc----cEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEE
Confidence            356799999988    35555  778877777654221      112210 001147889999 8888777  5699988


Q ss_pred             EECCCcceeeeecc--c--cCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348         84 WNIKTDICIAIFGG--V--EGHRDEVLSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        84 wd~~~~~~~~~~~~--~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      ++-.+.....-+..  .  ..--..+..|.+.|+|.+.+..  |+.++
T Consensus       112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly  157 (236)
T 1tl2_A          112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY  157 (236)
T ss_dssp             ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred             eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence            87643211111000  0  1122567999999999866666  77754

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.88  E-value=0.46  Score=37.18  Aligned_cols=55  Identities=11%  Similarity=0.183  Sum_probs=35.2

Q ss_pred             EEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceee
Q psy10348        232 FSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLL  290 (291)
Q Consensus       232 ~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~  290 (291)
                      ++++||++.|+++. ..+.|..|++.....+.. ...+..   .+..-.+++.+ +|++.+
T Consensus       226 ia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~-~~~~~~---~g~PDGi~vD~e~G~lwv  282 (355)
T 3sre_A          226 INISPDGKYVYIAELLAHKIHVYEKHANWTLTP-LRVLSF---DTLVDNISVDPVTGDLWV  282 (355)
T ss_dssp             EEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE-EEEEEC---SSEEEEEEECTTTCCEEE
T ss_pred             ceECCCCCEEEEEeCCCCeEEEEEECCCCcEec-CEEEeC---CCCCceEEEeCCCCcEEE
Confidence            56678898877664 678999999874322211 122222   35677888998 588765

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.75  E-value=0.52  Score=36.77  Aligned_cols=92  Identities=14%  Similarity=0.106  Sum_probs=45.7

Q ss_pred             CEEEEecCC-CeEEEEccCC--cc--eeEEEeeeccceeEEEEecCCCcEEEEeec-C---------CeEEEEECCCcce
Q psy10348         27 PLLAVAGSR-AVIRIFSPAF--HA--CVRHFYGHGHAINELKFHPQDFNLLLSVSK-D---------HTLRLWNIKTDIC   91 (291)
Q Consensus        27 ~~l~~~~~d-g~i~vw~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-d---------g~i~vwd~~~~~~   91 (291)
                      .+++.|+.+ ..+.+||+.+  .+  .+..+......-.+++..  ++.+++.|+. +         ..+.+||+.+.+.
T Consensus        21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W   98 (357)
T 2uvk_A           21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW   98 (357)
T ss_dssp             EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred             EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence            466666643 5788898864  22  221111011111223333  5577777765 2         3588999987654


Q ss_pred             eeeecccc-CCCCceEEEEEccCCCEEEEEecC
Q psy10348         92 IAIFGGVE-GHRDEVLSADFDLLGTKIMSCGMD  123 (291)
Q Consensus        92 ~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d  123 (291)
                      ...- .+. .....-.++.  .+++.++.|+.+
T Consensus        99 ~~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~  128 (357)
T 2uvk_A           99 VKLM-SHAPMGMAGHVTFV--HNGKAYVTGGVN  128 (357)
T ss_dssp             EECS-CCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred             EECC-CCCCcccccceEEE--ECCEEEEEeCcC
Confidence            4322 112 1111222222  456777777754

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.69  E-value=0.15  Score=39.64  Aligned_cols=109  Identities=9%  Similarity=-0.017  Sum_probs=65.1

Q ss_pred             cEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEc--cCCCEEEEE--ecCCcEEEEeccCchhhhhhccccc
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD--LLGTKIMSC--GMDHSLKLWDLTKPEIKDACAESYT  145 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~  145 (291)
                      .+++.++.||.|.-.|.++|+....+..  ....++....-.  +.+..++.+  +.||.|..++..++.....+...  
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~--~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~--   86 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEP--ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR--   86 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECG--GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH--
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecC--CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc--
Confidence            5788899999999999999999988732  111233221100  112234433  57999999998877433211100  


Q ss_pred             cCCCCccccccCccccCcccccccccCcceeE---EEE-------cCCEEEEecCCCeEEEecCCCCCc
Q psy10348        146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC---VRW-------LGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-------~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                                        ..    ....++..   ...       .+..+++|+.++++...|+++++.
T Consensus        87 ------------------~l----v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~  133 (339)
T 2be1_A           87 ------------------QL----VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI  133 (339)
T ss_dssp             ------------------HH----HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred             ------------------cc----eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence                              00    00111110   001       266889999999999999999866

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=95.62  E-value=0.4  Score=34.58  Aligned_cols=185  Identities=8%  Similarity=-0.004  Sum_probs=85.1

Q ss_pred             CcEEEEeecCCeEEEEECCCcc------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDI------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE  142 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~  142 (291)
                      ..+|++...| +++.=....+.      ....+.  .+--..+..++|+|+|.+.++  .+|.+.-.+..+.....-+..
T Consensus         4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG--~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s   78 (236)
T 1tl2_A            4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIG--KGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR   78 (236)
T ss_dssp             CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEE--SSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred             ceEEEEEeCC-cEEecCCCCCcccchhhhccccC--ccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc
Confidence            4566666776 65554444333      112221  111246779999998875555  678777766544322111110


Q ss_pred             ccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                      ..                   .+-  ..--..-.++.|+ ...|+.. .||.|.-++-.+.......   .....+..- 
T Consensus        79 ~t-------------------~IG--~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl---~~a~~vg~~-  132 (236)
T 1tl2_A           79 AK-------------------KIG--NGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWI---ARATEVGSG-  132 (236)
T ss_dssp             CE-------------------EEE--CSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHH---HHSEEEECS-
T ss_pred             cc-------------------Eec--ccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCcee---ccccEeccC-
Confidence            00                   000  0000113577777 2234433 6799988875332221000   000111110 


Q ss_pred             CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcc--eeEEEeccccccceeeeEEccCCceee
Q psy10348        222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSI--KFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                       .=..+  ..+.++|+|.+.++.  |+.++-....+......  ....+.. ..-..-+-+.|.++|.+.+
T Consensus       133 -gw~~~--~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~-~g~~~yr~l~f~~~G~l~~  197 (236)
T 1tl2_A          133 -GWSGF--KFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQ-GGWDTFKFLFFSSVGTLFG  197 (236)
T ss_dssp             -SGGGE--EEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEES-SSGGGEEEEEECTTSCEEE
T ss_pred             -CCCce--EEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceecc-CCcceEEEEEECCCCcEEE
Confidence             00122  345667889888888  77754333332211110  1122221 1122344577888887654

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=95.61  E-value=0.91  Score=38.63  Aligned_cols=158  Identities=6%  Similarity=-0.105  Sum_probs=92.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ..+.+++|.+...   .++++-...+.|+.++++.......+...-.....+++....+++.++-...+.|.+.++....
T Consensus       349 ~~~~~ld~d~~~~---~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~  425 (619)
T 3s94_A          349 RHAIAIDYDPVEG---YIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM  425 (619)
T ss_dssp             SSEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CccEEEEEEcCCC---eEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence            3456777777542   3444545577888888775443333333334677899986456666766677899999987443


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR  168 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (291)
                       ...+.  ...-.....+++.|....|+.+..  ...|...++..... ..+.                           
T Consensus       426 -~~~l~--~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~---------------------------  474 (619)
T 3s94_A          426 -RKILI--SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLV---------------------------  474 (619)
T ss_dssp             -CEEEE--CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEE---------------------------
T ss_pred             -EEEEE--ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEE---------------------------
Confidence             33331  233456789999997556665543  24555555543221 1110                           


Q ss_pred             cccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCC
Q psy10348        169 DIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRL  202 (291)
Q Consensus       169 ~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~  202 (291)
                      ...-.....|+++  .+.|+.+ +..+.|..+++...
T Consensus       475 ~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~  511 (619)
T 3s94_A          475 NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT  511 (619)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred             eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence            0012335567776  4444444 44678888887654

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=94.52  E-value=2.1  Score=37.00  Aligned_cols=107  Identities=16%  Similarity=0.116  Sum_probs=57.9

Q ss_pred             CEEEEecCC----CeEEEEccCCcceeEEE-e------eeccceeEEEEecCCCcEEEEeecCC------eEEEEECCCc
Q psy10348         27 PLLAVAGSR----AVIRIFSPAFHACVRHF-Y------GHGHAINELKFHPQDFNLLLSVSKDH------TLRLWNIKTD   89 (291)
Q Consensus        27 ~~l~~~~~d----g~i~vw~~~~~~~~~~~-~------~~~~~v~~~~~~~~~~~~l~s~~~dg------~i~vwd~~~~   89 (291)
                      .+++.||.+    ..+.+||..+++-...- .      .....-.+++..+.++.+++.|+.++      .+.+||..+.
T Consensus       399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~  478 (695)
T 2zwa_A          399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR  478 (695)
T ss_dssp             CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred             EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence            577777753    46888888776543222 1      01111122333311456777776543      4788998876


Q ss_pred             ceeeeeccccCCCCceEEEEEccCCCEEEEEecCC--cEEEEeccCch
Q psy10348         90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH--SLKLWDLTKPE  135 (291)
Q Consensus        90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~  135 (291)
                      +.... ..+......- +++...++..++.|+.++  .+.+||+.+.+
T Consensus       479 ~W~~~-~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~  524 (695)
T 2zwa_A          479 EWSMI-KSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEI  524 (695)
T ss_dssp             EEEEC-CCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred             cEEEC-CCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence            54332 1112111122 223323778888887754  68889887754

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=93.98  E-value=2.5  Score=38.10  Aligned_cols=37  Identities=24%  Similarity=0.528  Sum_probs=31.4

Q ss_pred             ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      .+.+++..+ +..++++-+.|+++|+|++.+++++...
T Consensus       237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            466777777 7789999999999999999999888764

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=93.48  E-value=2.5  Score=36.53  Aligned_cols=107  Identities=16%  Similarity=0.149  Sum_probs=58.2

Q ss_pred             CEEEEecCC------CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeec
Q psy10348         27 PLLAVAGSR------AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFG   96 (291)
Q Consensus        27 ~~l~~~~~d------g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~   96 (291)
                      .+++.||.+      +.+.+||..+.+-..  .+.. ...-.+++... ++.+++.|+.++  .+.+||..+.+....-.
T Consensus       453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~-~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~  530 (695)
T 2zwa_A          453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH-TRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTP  530 (695)
T ss_dssp             EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-CCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred             EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-CcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence            477777654      357788887653221  1111 11112233323 667888887655  68999998765433210


Q ss_pred             --cccCCCCceEEEEEccC-CCEEEEEec--C-----CcEEEEeccCch
Q psy10348         97 --GVEGHRDEVLSADFDLL-GTKIMSCGM--D-----HSLKLWDLTKPE  135 (291)
Q Consensus        97 --~~~~~~~~i~~~~~~~~-~~~l~~~~~--d-----~~i~v~d~~~~~  135 (291)
                        .+......-.++.+..+ +..++.|+.  +     ..+.+||+.+..
T Consensus       531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred             CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence              01111222233555555 566777765  2     358888887765

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=93.46  E-value=2.6  Score=34.28  Aligned_cols=108  Identities=10%  Similarity=0.119  Sum_probs=60.2

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EEee------eccceeEEEEecC---CCcEEEEeec--
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HFYG------HGHAINELKFHPQ---DFNLLLSVSK--   77 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~~l~s~~~--   77 (291)
                      .....++|.|++    .++++-...+.|++++..+++...  .+..      .......|+|+|+   ++.+.++-+.  
T Consensus        27 ~~P~~~a~~pdG----~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~  102 (454)
T 1cru_A           27 NKPHALLWGPDN----QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN  102 (454)
T ss_dssp             SSEEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred             CCceEEEEcCCC----cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence            455789999998    366654443579888865554322  2211      1345668999994   4444444332  


Q ss_pred             ----------CCeEEEEECCCc-----ceeeeecccc-CCCCceEEEEEccCCCEEEEEec
Q psy10348         78 ----------DHTLRLWNIKTD-----ICIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGM  122 (291)
Q Consensus        78 ----------dg~i~vwd~~~~-----~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~  122 (291)
                                ...|.-++...+     .....+..+. ........++|.|+|.+.++.+.
T Consensus       103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                      234665655322     1111111111 12235788999999987776554

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=93.13  E-value=4.1  Score=35.56  Aligned_cols=115  Identities=10%  Similarity=-0.063  Sum_probs=64.7

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-----cee---EEEee----eccceeEEEEecCCCcEEEE-eecC
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-----ACV---RHFYG----HGHAINELKFHPQDFNLLLS-VSKD   78 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-----~~~---~~~~~----~~~~v~~~~~~~~~~~~l~s-~~~d   78 (291)
                      .|.++....++     .|..|+..+-+.++|..+.     ...   ..+..    ....|.++...+ ++.+.+. +..+
T Consensus       420 ~v~~i~~d~~g-----~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~  493 (758)
T 3ott_A          420 WTYYIFEDTAG-----QLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNK  493 (758)
T ss_dssp             SEEEEEECTTS-----EEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCS
T ss_pred             eEEEEEEcCCC-----CEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCC
Confidence            46666555444     6677776667888875431     111   11111    123488888887 7776653 4444


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                       -+..+|..+++..............+.++....+|.+.+. +.. -+..+|..+.+
T Consensus       494 -Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~  547 (758)
T 3ott_A          494 -GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDES  547 (758)
T ss_dssp             -SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CC
T ss_pred             -CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCc
Confidence             4888898776544322100111346788888877876554 444 48888876554

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=92.66  E-value=2.9  Score=32.60  Aligned_cols=108  Identities=12%  Similarity=0.024  Sum_probs=62.3

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EE----eeeccceeEEEEecC---CCcEEEEe--ecCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HF----YGHGHAINELKFHPQ---DFNLLLSV--SKDH   79 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~----~~~~~~v~~~~~~~~---~~~~l~s~--~~dg   79 (291)
                      ..-..++|.|++    .++++--..|.|++++..+++...  .+    .........|+++|+   ++.+.++-  ..+.
T Consensus        32 ~~P~~ia~~pdG----~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~  107 (347)
T 3das_A           32 NSPWGLAPLPGG----DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN  107 (347)
T ss_dssp             SSEEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred             CCceEEEEcCCC----cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence            556789999998    466665558999999876555321  11    112456789999983   34444432  2345


Q ss_pred             eEEEEECCCcc--------eeeeecccc-CCCCceEEEEEccCCCEEEEEec
Q psy10348         80 TLRLWNIKTDI--------CIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGM  122 (291)
Q Consensus        80 ~i~vwd~~~~~--------~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~  122 (291)
                      .|.-|.+..+.        ....+..+. .....-..+.|.|+|.+.++.+.
T Consensus       108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred             EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence            66666655421        111111111 11223456899999987666553

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=92.51  E-value=3  Score=32.50  Aligned_cols=66  Identities=12%  Similarity=0.027  Sum_probs=38.0

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCC-----CeEEEEccCCcce------eEEEee---eccceeEEEEecCCCcEEEEe
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSR-----AVIRIFSPAFHAC------VRHFYG---HGHAINELKFHPQDFNLLLSV   75 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~------~~~~~~---~~~~v~~~~~~~~~~~~l~s~   75 (291)
                      ......++++|+...++.++++-...     +.|..++...+..      +..+..   .......++|.| ++.+.++-
T Consensus        74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~  152 (352)
T 2ism_A           74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTT  152 (352)
T ss_dssp             TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEEC
T ss_pred             CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEE
Confidence            35678999999843333344444432     6788888764321      111221   011236899999 88776664


Q ss_pred             e
Q psy10348         76 S   76 (291)
Q Consensus        76 ~   76 (291)
                      +
T Consensus       153 G  153 (352)
T 2ism_A          153 G  153 (352)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=91.51  E-value=6.6  Score=34.26  Aligned_cols=222  Identities=11%  Similarity=0.072  Sum_probs=114.0

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ..|.++.-..++     .|..|+.+| +..||..+.+...........|.++.. . ++. |..++.+ -+..+|..+++
T Consensus        63 ~~i~~i~~d~~g-----~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~-~g~-lWigt~~-Gl~~~~~~~~~  132 (758)
T 3ott_A           63 TRIYCGVIIDNT-----YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-Q-GDT-LWLGALN-GLYTYQLQSRK  132 (758)
T ss_dssp             SCEEEEEEETTT-----EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-E-TTE-EEEEETT-EEEEEETTTCC
T ss_pred             ceEEEEEEcCCC-----cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-c-CCc-EEEEcCC-cceeEeCCCCe
Confidence            457777665554     677777665 788998776433211111234666654 3 444 4455555 58888987655


Q ss_pred             eeeeecc-ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         91 CIAIFGG-VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        91 ~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ....... .......|.++....++.+.+ |+.+ -+..++..+++... +.    . +...                 .
T Consensus       133 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~----~-~~~~-----------------~  187 (758)
T 3ott_A          133 LTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IP----L-PVHS-----------------S  187 (758)
T ss_dssp             EEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-EC----C-CCCT-----------------T
T ss_pred             EEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ec----C-CCcc-----------------c
Confidence            3322000 011235688888887777555 4444 47778876544211 00    0 0000                 0


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS  247 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d  247 (291)
                      .....|.++..+  ++.|..|+. +-+..+|..+.+..          ....+  ...  .+.++..+.+|.+.+ |+.+
T Consensus       188 ~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~----------~~~~l--~~~--~i~~i~~d~~g~lWi-gT~~  251 (758)
T 3ott_A          188 QSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK----------QTEAF--HNN--SIKSLALDGNGDLLA-GTDN  251 (758)
T ss_dssp             CSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE----------EEEEE--EEE--EEEEEEECTTCCEEE-EETT
T ss_pred             cccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE----------eccCC--CCC--eEEEEEEcCCCCEEE-EeCC
Confidence            012347777766  455555663 56778887654321          11111  111  233455566565544 4444


Q ss_pred             CcEEEEEcCCCCCCcceeEEEecc------ccccceeeeEEccCCcee
Q psy10348        248 GRTYVWDLDVQDPSSIKFQILSHP------RCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       248 g~i~vwd~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~g~~l  289 (291)
                      | +.+++..+.+.     ..+...      -....|.++....+|.+-
T Consensus       252 G-l~~~~~~~~~~-----~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW  293 (758)
T 3ott_A          252 G-LYVYHNDTTPL-----QHIIHDSRNIQSLTNNIIWNIFADQEHNIW  293 (758)
T ss_dssp             E-EEEECCTTSCC-----EEECCCTTCTTSCSCSCEEEEEECTTCCEE
T ss_pred             c-eeEEecCCCcE-----EEEEcCCCCcCcCCcCeEEEEEEcCCCCEE
Confidence            4 77888765431     111110      112357777777766543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=89.77  E-value=7.2  Score=31.81  Aligned_cols=109  Identities=14%  Similarity=0.092  Sum_probs=60.7

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEe-----e----eccceeEEEEecC---CCcEEEEe
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFY-----G----HGHAINELKFHPQ---DFNLLLSV   75 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~-----~----~~~~v~~~~~~~~---~~~~l~s~   75 (291)
                      +.-..++|.|++.   ..|+++...|.|++++....   ..+..+.     +    .......|+|+|+   ++.+.++-
T Consensus        14 ~~P~~~a~~pdG~---~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y   90 (463)
T 2wg3_C           14 RQPVGALHSGDGS---QRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY   90 (463)
T ss_dssp             SSEEEEECCSSSS---CCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred             CCceEEEECCCCC---eEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence            4556889999873   24666678899999975422   1222221     0    1346788999992   24444443


Q ss_pred             ecC------------CeEEEEECCCc----------ceeeeeccccCCCCceEEEEEccCCCEEEEEecC
Q psy10348         76 SKD------------HTLRLWNIKTD----------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD  123 (291)
Q Consensus        76 ~~d------------g~i~vwd~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  123 (291)
                      +.+            ..|.-|.+..+          +.+..+.. ......-..|+|.|||.+.++.+..
T Consensus        91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~-~~~~H~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE-LHRKHLGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE-SSSSSCEEEEEECTTSCEEEEECCT
T ss_pred             eCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC-CCCcccCCcEeECCCCcEEEEeCCC
Confidence            321            13444655421          12222210 1222346789999999877766643

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=89.21  E-value=6.6  Score=30.63  Aligned_cols=75  Identities=9%  Similarity=-0.032  Sum_probs=46.0

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcc-eeeeeccccCCCCceEEEEEccC---CCEEEEEec----C----C
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDEVLSADFDLL---GTKIMSCGM----D----H  124 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~----d----~  124 (291)
                      .....|+|.| +++++++ ..+|.|+++|. +++ .+..+............++++|+   +..|+.+..    +    .
T Consensus        29 ~~P~~ia~~p-dG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPLG-GGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEEE-TTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEcC-CCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            4567899999 8875555 56699999973 454 22221100122356889999997   555555443    2    5


Q ss_pred             cEEEEeccCc
Q psy10348        125 SLKLWDLTKP  134 (291)
Q Consensus       125 ~i~v~d~~~~  134 (291)
                      .|..|+....
T Consensus       106 ~v~r~~~~~~  115 (354)
T 3a9g_A          106 RVIRGRLDGS  115 (354)
T ss_dssp             EEEEEEECSS
T ss_pred             EEEEEEECCC
Confidence            6777776543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=89.17  E-value=7.9  Score=31.46  Aligned_cols=33  Identities=0%  Similarity=-0.177  Sum_probs=23.0

Q ss_pred             CceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348        103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus       103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                      .....++|.|+|+++++-...+.|++++..++.
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~   59 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS   59 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence            456799999999866665444568888765443

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=89.15  E-value=5.8  Score=29.83  Aligned_cols=70  Identities=19%  Similarity=0.177  Sum_probs=36.1

Q ss_pred             cceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEE
Q psy10348        173 NYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYV  252 (291)
Q Consensus       173 ~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~v  252 (291)
                      ..|..++....+.+.- .||.|..|=...........        .    ....+..  ++... ...++..  ||.|..
T Consensus       180 ~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~--------~----~~~~v~~--i~~G~-~h~~al~--~g~v~~  241 (282)
T 3qhy_B          180 SGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPT--------E----ALSGVSA--IASGE-WYSLALK--NGKVIA  241 (282)
T ss_dssp             SSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCG--------G----GGSSCCE--EEECS-SCEEEEE--TTEEEE
T ss_pred             CCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCc--------c----cCCCceE--EEcCC-CEEEEEE--CCEEEE
Confidence            3466776654443334 69999999655443221100        0    0112222  33321 2344444  899999


Q ss_pred             EEcCCCCC
Q psy10348        253 WDLDVQDP  260 (291)
Q Consensus       253 wd~~~~~~  260 (291)
                      |-.....+
T Consensus       242 wG~n~~gq  249 (282)
T 3qhy_B          242 WGSSRTAP  249 (282)
T ss_dssp             ESTTCCCC
T ss_pred             ecCCCCcc
Confidence            98776544

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=88.92  E-value=1.5  Score=40.42  Aligned_cols=37  Identities=24%  Similarity=0.528  Sum_probs=30.5

Q ss_pred             ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      .+.+++..+ +..++++-+.|+++|+|++.+++++...
T Consensus       239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~  275 (1139)
T 4fhn_B          239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI  275 (1139)
T ss_dssp             CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred             eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence            445566666 7789999999999999999999988764

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=88.69  E-value=8.5  Score=31.19  Aligned_cols=205  Identities=12%  Similarity=0.090  Sum_probs=118.0

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeec----cceeEEEEecCCCcEEEEee-------c
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHG----HAINELKFHPQDFNLLLSVS-------K   77 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~-------~   77 (291)
                      .+.|.--.|-.+.     .|+..+. ..|+-|+++. ..+.+.+..|.    ..|..-..++ +.++++..+       -
T Consensus       105 ~e~VvfWkWis~~-----~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v  177 (494)
T 1bpo_A          105 TDDVTFWKWISLN-----TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRV  177 (494)
T ss_dssp             SSCCCEEEEEETT-----EEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEE
T ss_pred             CCCceEEEecCCC-----eEEEEcC-CeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcc
Confidence            3455555565443     5666554 5899999974 35677777664    3566666677 666665432       3


Q ss_pred             CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC---CEEEEEec---CCcEEEEeccCc-hhhhhhc---cccccC
Q psy10348         78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG---TKIMSCGM---DHSLKLWDLTKP-EIKDACA---ESYTFN  147 (291)
Q Consensus        78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~---d~~i~v~d~~~~-~~~~~~~---~~~~~~  147 (291)
                      .|.+.+|..+.+. -+.+   .+|......+....+.   ..|..+..   .+.+++.++... .....+.   ..+.|.
T Consensus       178 ~G~mQLYS~er~~-sQ~i---eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp  253 (494)
T 1bpo_A          178 VGAMQLYSVDRKV-SQPI---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP  253 (494)
T ss_dssp             EEEEEEEESTTCC-EEEE---CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC
T ss_pred             cceEEEeeccccc-cchh---eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC
Confidence            4778999988543 3444   6787666555543221   23444443   278888888543 1111111   111222


Q ss_pred             CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348        148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC  225 (291)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (291)
                      |                    +...+---++..+  .+.++.-+.-|.|.+||+.++..            +..-.....
T Consensus       254 p--------------------e~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~------------i~~nrIs~~  301 (494)
T 1bpo_A          254 P--------------------EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC------------IYMNRISGE  301 (494)
T ss_dssp             T--------------------TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE------------EEEEECCSS
T ss_pred             c--------------------ccccCceeEEEecccCCEEEEEecCceEEEEeccccee------------eeeecccCC
Confidence            2                    1122333455555  45777788899999999999965            444444555


Q ss_pred             cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      .|...+..  .+..=++.....|.|.-..++...
T Consensus       302 ~iF~t~~~--~~~~Gi~~Vnr~GqVl~v~v~e~~  333 (494)
T 1bpo_A          302 TIFVTAPH--EATAGIIGVNRKGQVLSVCVEEEN  333 (494)
T ss_dssp             CEEEEEEE--TTTTEEEEEETTCEEEEEEECTTT
T ss_pred             ceEEeccc--CCCCcEEEEccCceEEEEEEcccc
Confidence            55443322  334444444578888777777654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=88.26  E-value=18  Score=34.38  Aligned_cols=204  Identities=12%  Similarity=0.090  Sum_probs=104.5

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeee----ccceeEEEEecCCCcEEEEee-------cC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGH----GHAINELKFHPQDFNLLLSVS-------KD   78 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~-------~d   78 (291)
                      ++|.--.|-...     .|+..+. ..|+-|++.. ..+.+.+..|    ...|..-..++ +.++++..+       -.
T Consensus       106 e~VvfWkWis~~-----~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~  178 (1630)
T 1xi4_A          106 DDVTFWKWISLN-----TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVV  178 (1630)
T ss_pred             CCceEEEecCCC-----eeEEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCccc
Confidence            445445554443     4555543 5799999963 3455555544    34566666677 666655432       35


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEcc--C-CCEEEEEec---CCcEEEEeccCc-hhhhhhc---cccccCC
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL--L-GTKIMSCGM---DHSLKLWDLTKP-EIKDACA---ESYTFNP  148 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~~~~---d~~i~v~d~~~~-~~~~~~~---~~~~~~~  148 (291)
                      |.+.+|..+.+. .+.+   .+|.+....+....  . ...+..+..   .+.++|.++... .....+.   ..+.|.|
T Consensus       179 G~mQLyS~er~~-sQ~i---egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~  254 (1630)
T 1xi4_A          179 GAMQLYSVDRKV-SQPI---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP  254 (1630)
T ss_pred             ceeeeeeccccc-chhh---hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCc
Confidence            889999987543 2333   56655544433321  1 123332222   268888888553 1111111   0111111


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                      +                    ...+-..++..+  -+.++.-+.-|.|.++|+.++...            ..-......
T Consensus       255 ~--------------------~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i------------~~~ris~~~  302 (1630)
T 1xi4_A          255 E--------------------AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI------------YMNRISGET  302 (1630)
T ss_pred             c--------------------cccCcceEEEeccccCEEEEEecCceEEEEecccchhh------------hhccccCCc
Confidence            1                    112222244444  446777788999999999998653            322223333


Q ss_pred             EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348        227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD  259 (291)
Q Consensus       227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  259 (291)
                      |...+  ++....-++.....|.|.-..+....
T Consensus       303 iF~~~--~~~~~~g~~~vnr~G~vl~v~v~~~~  333 (1630)
T 1xi4_A          303 IFVTA--PHEATAGIIGVNRKGQVLSVCVEEEN  333 (1630)
T ss_pred             eEEec--cCCCCCceEEEcCCceEEEEEEccch
Confidence            33322  22222333333466777666666554

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=87.56  E-value=7.4  Score=29.21  Aligned_cols=185  Identities=11%  Similarity=0.063  Sum_probs=95.7

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ..|..++.....     .++. . ||.|..|-....-.+-.-......|..++... . ..++. . ||.|..|-.....
T Consensus        24 ~~i~~ia~G~~h-----~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~-~-hs~~l-~-~G~v~~wG~n~~G   92 (282)
T 3qhy_B           24 SGVDAIAGGYFH-----GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-Y-HSLAL-K-DGEVIAWGGNEDG   92 (282)
T ss_dssp             SSCCEEEECSSE-----EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECS-S-EEEEE-E-TTEEEEEECCTTS
T ss_pred             CCCcEEEeCCCe-----EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCC-C-EEEEE-E-CCEEEEeeCCCCC
Confidence            456666665443     3444 4 89999997654221111111234677777664 3 44444 4 8999999765322


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      .+..-   ..-...|..++...+  ..+.-. ||.|..|-......+..                       +     ..
T Consensus        93 qlg~P---~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-----------------------~-----~~  138 (282)
T 3qhy_B           93 QTTVP---AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-----------------------P-----AE  138 (282)
T ss_dssp             TTCCC---GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-----------------------C-----GG
T ss_pred             CCCCC---cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-----------------------C-----cc
Confidence            21111   112346777776543  333334 89999997654322110                       0     00


Q ss_pred             cCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcE
Q psy10348        171 HRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRT  250 (291)
Q Consensus       171 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i  250 (291)
                      ....|..++....+.+.-. ||.|..|=...........           . ....+.  .++... ...++.  .||.|
T Consensus       139 ~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~-----------~-~~~~v~--~i~~G~-~hs~al--~~G~v  200 (282)
T 3qhy_B          139 AQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPA-----------E-AQSGVD--DVAGGI-FHSLAL--KDGKV  200 (282)
T ss_dssp             GGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCG-----------G-GGSSEE--EEEECS-SEEEEE--ETTEE
T ss_pred             CCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCce-----------e-cCCCeE--EEEecC-CEEEEE--ECCeE
Confidence            1234666666544444344 7999999765433321000           0 012233  333321 334444  58999


Q ss_pred             EEEEcCCC
Q psy10348        251 YVWDLDVQ  258 (291)
Q Consensus       251 ~vwd~~~~  258 (291)
                      +.|-....
T Consensus       201 ~~wG~n~~  208 (282)
T 3qhy_B          201 IAWGDNRY  208 (282)
T ss_dssp             EEEECCTT
T ss_pred             EEEECCCC
Confidence            99987654

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=87.36  E-value=14  Score=32.04  Aligned_cols=34  Identities=6%  Similarity=0.211  Sum_probs=29.0

Q ss_pred             CcceeEEEEcCCEEEEecCCCeEEEecCCCCCcc
Q psy10348        172 RNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       172 ~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      ...|.++.+...++++-+.|.++|+|++.++...
T Consensus       221 ~~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv  254 (729)
T 3f7f_A          221 DSVISCKLFHERYLIVLTQNCHLKIWDLTSFTLI  254 (729)
T ss_dssp             CCEEEEEEETTTEEEEEETTCEEEEEETTTTEEE
T ss_pred             CceEEEeccCCcEEEEEEcCCeEEEEEcCCCceE
Confidence            3567888888889999999999999999998654

>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}

Probab=86.66  E-value=10  Score=29.95  Aligned_cols=205  Identities=10%  Similarity=0.069  Sum_probs=98.8

Q ss_pred             EEEEecCCCeEEEEccCCc-c----------eeEEEeee-ccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-c----
Q psy10348         28 LLAVAGSRAVIRIFSPAFH-A----------CVRHFYGH-GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-I----   90 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~-~----------~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~----   90 (291)
                      ..+.-..||.|+.|-.... +          ....+... ...|..++...   ...+.-..||.|..|-.... +    
T Consensus       118 h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~  194 (389)
T 3kci_A          118 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG---AHSACVTAAGDLYTWGKGRYGRLGHS  194 (389)
T ss_dssp             EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred             eEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc---CeEEEEeCCCeEEEeCCCCCCCcCCC
Confidence            5555677899999964321 1          01111111 12455555443   44555567999999965321 1    


Q ss_pred             ------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         91 ------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        91 ------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                            ....+.  ......|..++........+.-..||.|..|-....-.+..-..      .....|.        .
T Consensus       195 ~~~~~~~p~~v~--~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~------~~~~~p~--------~  258 (389)
T 3kci_A          195 DSEDQLKPKLVE--ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS------DGCKVPM--------K  258 (389)
T ss_dssp             SCCCEEEEEECG--GGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSC------CCEEEEE--------E
T ss_pred             CCcccccceEec--ccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCC------CCccccE--------E
Confidence                  111111  11234567776644335566667799999997544322211000      0000000        0


Q ss_pred             cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEE
Q psy10348        165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~  243 (291)
                      +.  ......|..++....+.+.-..||.|..|=.......-......... ...+.. ....  ++.++..  ....++
T Consensus       259 v~--~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~-P~~v~~l~~~~--v~~ia~G--~~h~~a  331 (389)
T 3kci_A          259 ID--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR-PRQVQGLQGKK--VIAIATG--SLHCVC  331 (389)
T ss_dssp             CG--GGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEE-EEECGGGTTCC--EEEEEEC--SSEEEE
T ss_pred             ec--ccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccC-CeEeccCCCCC--EEEEEec--cCeEEE
Confidence            00  00122466666656666666789999999654322211111111111 111111 1122  3334433  445555


Q ss_pred             EcCCCcEEEEEcCCC
Q psy10348        244 GNQSGRTYVWDLDVQ  258 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~  258 (291)
                      -..||.|+.|-....
T Consensus       332 l~~~G~v~~wG~n~~  346 (389)
T 3kci_A          332 CTEDGEVYTWGDNDE  346 (389)
T ss_dssp             EETTCCEEEEECCTT
T ss_pred             ECCCCCEEEeeCCCC
Confidence            678999999987643

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=86.26  E-value=6.9  Score=32.79  Aligned_cols=77  Identities=14%  Similarity=0.079  Sum_probs=52.2

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEE-ecCCCeEEEEccCCcc------e-------eEEEeeeccceeEEEEecCCCcE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAV-AGSRAVIRIFSPAFHA------C-------VRHFYGHGHAINELKFHPQDFNL   71 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~-~~~dg~i~vw~~~~~~------~-------~~~~~~~~~~v~~~~~~~~~~~~   71 (291)
                      .+........+..+||+.    ++++ |-.+.++.|+|.++..      .       ....+ -.-.....+|.+ +|..
T Consensus       318 ~iP~pksPHGv~vsPDGk----yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~a  391 (638)
T 3sbq_A          318 YVPVPKNPHGCNTSSDGK----YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNA  391 (638)
T ss_dssp             EEEESSSCCCEEECTTSC----EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEE
T ss_pred             EEeCCCCCcceeeCCCCC----EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCce
Confidence            344456666788888885    5555 4568899999987421      1       22222 123456789999 8866


Q ss_pred             EEEeecCCeEEEEECCC
Q psy10348         72 LLSVSKDHTLRLWNIKT   88 (291)
Q Consensus        72 l~s~~~dg~i~vwd~~~   88 (291)
                      ..|-.-|..|.-|++..
T Consensus       392 YTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          392 YTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             EEEETTTTEEEEEEHHH
T ss_pred             EeeeeecceEEEEeccH
Confidence            66777899999999874

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=80.96  E-value=32  Score=31.12  Aligned_cols=38  Identities=18%  Similarity=0.212  Sum_probs=32.6

Q ss_pred             ceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348        104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus       104 ~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      .+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            46777788888899999999999999999999877644

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=80.83  E-value=18  Score=28.14  Aligned_cols=108  Identities=11%  Similarity=0.079  Sum_probs=53.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecC-------CCeEEEEccCCc--c--eeEE-Eeee------ccceeEEEEecCCCcE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGS-------RAVIRIFSPAFH--A--CVRH-FYGH------GHAINELKFHPQDFNL   71 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~-------dg~i~vw~~~~~--~--~~~~-~~~~------~~~v~~~~~~~~~~~~   71 (291)
                      ......++++|+...++.+.++-..       ...|..|+...+  .  ..+. +..-      ...-..|+|.| ++.+
T Consensus        65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~L  143 (353)
T 2g8s_A           65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYL  143 (353)
T ss_dssp             TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEE
T ss_pred             CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcE
Confidence            3456899999962111134444322       235666666432  1  1111 1110      11235799999 8876


Q ss_pred             EEEeec-------------CCeEEEEECCCcc------------eeeeeccccCCCCceEEEEEccCCCEEEEEe
Q psy10348         72 LLSVSK-------------DHTLRLWNIKTDI------------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        72 l~s~~~-------------dg~i~vwd~~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      .++-+.             .|.|.-++....-            ....+.  .++ .....++|+|....|.++.
T Consensus       144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a--~G~-rnp~gl~~d~~~g~l~~~d  215 (353)
T 2g8s_A          144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS--YGI-RNPQGMAMNPWSNALWLNE  215 (353)
T ss_dssp             EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE--ECC-SEEEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE--EcC-cCccceEEECCCCCEEEEe
Confidence            666433             2456666655210            111111  133 3467899999433444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-14
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	6e-09
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-04
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-08
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-06
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-06
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-10
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-04
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	0.001
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-08
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	7e-08
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	9e-07
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-06
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	4e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	5e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.003
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.003

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.6 bits (166), Expect = 7e-14
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 4/119 (3%)

Query: 12  NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL 71
           +  T + +       P L        I+++  +   C+    GH + +  + FH      
Sbjct: 203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKF 261

Query: 72  LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
           +LS + D TLR+W+ K   C+        H   V S DF      +++  +D ++K+W+
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (128), Expect = 6e-09
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 52/204 (25%)

Query: 16  CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-------- 67
               +       L+A   +   +R++  A   C      H H +  + + P+        
Sbjct: 145 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISE 204

Query: 68  -----------DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTK 116
                          LLS S+D T+++W++ T +C+       GH + V    F   G  
Sbjct: 205 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL---VGHDNWVRGVLFHSGGKF 261

Query: 117 IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVD 176
           I+SC  D +L++WD                                    T + H ++V 
Sbjct: 262 ILSCADDKTLRVWDYKNKRC----------------------------MKTLNAHEHFVT 293

Query: 177 CVRWL--GDFVLSKSCENCIICWK 198
            + +     +V++ S +  +  W+
Sbjct: 294 SLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 1e-07
 Identities = 41/244 (16%), Positives = 78/244 (31%), Gaps = 28/244 (11%)

Query: 13  FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
                 S+ +      +  A     I+++      CV+ F GH   +  ++ +  D  L+
Sbjct: 100 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLI 158

Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
            S S D T+R+W + T  C A       HR  V    +    +         S       
Sbjct: 159 ASCSNDQTVRVWVVATKECKAEL---REHRHVVECISWAPESSYSSISEATGSETKKSGK 215

Query: 133 KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC 190
                 + +        ++ + +D          T   H N+V  V +   G F+LS + 
Sbjct: 216 PGPFLLSGSRD------KTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCAD 267

Query: 191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRT 250
           +  +  W            +  N   +  LN  +  +  + F        +  G+     
Sbjct: 268 DKTLRVW------------DYKNKRCMKTLNAHEHFVTSLDFHKT--APYVVTGSVDQTV 313

Query: 251 YVWD 254
            VW+
Sbjct: 314 KVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 44/280 (15%), Positives = 83/280 (29%), Gaps = 64/280 (22%)

Query: 18  WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ---------- 67
             +       ++  A   A I+++        R   GH  ++ ++ F             
Sbjct: 21  TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 80

Query: 68  -------------------------------DFNLLLSVSKDHTLRLWNIKTDICIAIFG 96
                                          + + ++S S+D T+++W ++T  C+  F 
Sbjct: 81  MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF- 139

Query: 97  GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD 156
              GHR+ V     +  GT I SC  D ++++W +   E K            R      
Sbjct: 140 --TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK------AELREHRHVVECI 191

Query: 157 TQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTI 216
           +        S  +   +        G F+LS S +  I  W            + +    
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW------------DVSTGMC 239

Query: 217 INRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD 256
           +  L   D  +  + F      K +          VWD  
Sbjct: 240 LMTLVGHDNWVRGVLFHSG--GKFILSCADDKTLRVWDYK 277

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (107), Expect = 2e-06
 Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 12/211 (5%)

Query: 49  VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSA 108
                GH   +  + FHP  F++++S S+D T+++W+ +T          +GH D V   
Sbjct: 10  KYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTL---KGHTDSVQDI 65

Query: 109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168
            FD  G  + SC  D ++KLWD    E             + S  P         +  T 
Sbjct: 66  SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 125

Query: 169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRL-----EDKELRTNETNVTIINRLNFK 223
            +    V     +  F   +     +   + G L      D+ +R      T   +   +
Sbjct: 126 KMW--EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-TKECKAELR 182

Query: 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWD 254
           +        S        ++   +G      
Sbjct: 183 EHRHVVECISWAPESSYSSISEATGSETKKS 213

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 6/166 (3%)

Query: 99  EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158
            GHR  V    F  + + ++S   D ++K+WD    + +         +  +      + 
Sbjct: 14  SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL--KGHTDSVQDISFDHSG 71

Query: 159 KEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN 218
           K      +   I          +          + +     G       R     +  + 
Sbjct: 72  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131

Query: 219 RLN----FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP 260
                  F     W      +    ++A  +      VW +  ++ 
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 177

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 61.7 bits (148), Expect = 2e-11
 Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 6/115 (5%)

Query: 18  WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH--AINELKFHPQDFNLLLSV 75
            ++         A     A  R+F       +  +        I  + F      LLL+ 
Sbjct: 230 NAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAG 288

Query: 76  SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
             D    +W+        +     GH + V        G  + +   D  LK+W+
Sbjct: 289 YDDFNCNVWDALKADRAGVL---AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.3 bits (121), Expect = 4e-08
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 32/162 (19%)

Query: 38  IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
            +++      C + F GH   IN + F P + N   + S D T RL++++ D  + +   
Sbjct: 208 AKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQEL-MTYS 265

Query: 98  VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157
            +     + S  F   G  +++   D +  +WD  K +                      
Sbjct: 266 HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---------------------- 303

Query: 158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICW 197
                 +      H N V C+     G  V + S ++ +  W
Sbjct: 304 ------RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 17/251 (6%)

Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
             R   GH   I  + +   D  LL+S S+D  L +W+  T   +            V++
Sbjct: 47  TRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAI---PLRSSWVMT 102

Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167
             +   G  +   G+D+   +++L   E     +     +    +             S 
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162

Query: 168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGR------LEDKELRT-NETNVTIINRL 220
                 +              + +   +   P          D   +  +          
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222

Query: 221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQT 280
              + +I  I F  +      A G+      ++       +  +    SH   +  +   
Sbjct: 223 TGHESDINAICFFPN--GNAFATGSDDATCRLF----DLRADQELMTYSHDNIICGITSV 276

Query: 281 TLSKNGNVLLC 291
           + SK+G +LL 
Sbjct: 277 SFSKSGRLLLA 287

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.9 bits (107), Expect = 2e-06
 Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 1/74 (1%)

Query: 12  NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL 71
           N      S+       LL          ++            GH + ++ L     D   
Sbjct: 268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DGMA 326

Query: 72  LLSVSKDHTLRLWN 85
           + + S D  L++WN
Sbjct: 327 VATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.5 bits (106), Expect = 3e-06
 Identities = 26/211 (12%), Positives = 58/211 (27%), Gaps = 45/211 (21%)

Query: 46  HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV 105
                  +              D  L +S + D + +LW+++  +C   F    GH  ++
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF---TGHESDI 229

Query: 106 LSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165
            +  F   G    +   D + +L+                          D + +     
Sbjct: 230 NAICFFPNGNAFATGSDDATCRLF--------------------------DLRADQELMT 263

Query: 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223
            + D     +  V +   G  +L+   +     W            +         L   
Sbjct: 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW------------DALKADRAGVLAGH 311

Query: 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWD 254
           D  +  +  + D     +A G+      +W+
Sbjct: 312 DNRVSCLGVTDD--GMAVATGSWDSFLKIWN 340

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (137), Expect = 4e-10
 Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 5/87 (5%)

Query: 45  FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE 104
                   + H   +  LKF        +S  KD+ L  W       I            
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSK----ESSS 308

Query: 105 VLSADFDLLGTKIMSCGMDHSLKLWDL 131
           VLS D  +    I++   D    ++++
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 4e-04
 Identities = 21/218 (9%), Positives = 54/218 (24%), Gaps = 10/218 (4%)

Query: 24  SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
            G+         A+I    P  HA   +   HG  +  +         + +      +++
Sbjct: 20  DGQMQPVPFPPDALIGPGIP-RHARQINTLNHGEVVCAVTISN-PTRHVYTGG-KGCVKV 76

Query: 84  WNIKTDICIAIFGGVE--GHRDEVLSADFDLLGTKIMSCG-----MDHSLKLWDLTKPEI 136
           W+I      +    ++     + + S      G  ++  G         L          
Sbjct: 77  WDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE 136

Query: 137 KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIIC 196
             + A +                      +  D+H   +           S    +    
Sbjct: 137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT 196

Query: 197 WKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM 234
                  D  +R+ +       + +    +I+ + +  
Sbjct: 197 KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP 234

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.4 bits (129), Expect = 4e-09
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 31  VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90
           +  +       +P    C   + GH   +  +     D   +LS SKD  +  W+ K+  
Sbjct: 283 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGN 341

Query: 91  CIAIFGGVEGHRDEVLS------ADFDLLGTKIMSCGMDHSLKLWDLTK 133
            + +    +GHR+ V+S      +          +   D   ++W   K
Sbjct: 342 PLLML---QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.3 bits (121), Expect = 5e-08
 Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 30/217 (13%)

Query: 45  FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG----VEG 100
                         +  +   P D   + + S D  +R+W+ +T   +           G
Sbjct: 193 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG 252

Query: 101 HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE 160
           H+D V S  F   G  ++S  +D S+KLW+L     K       +               
Sbjct: 253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV---------- 302

Query: 161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN 218
                 T   H+++V  V      +++LS S +  ++ W        + ++    + +  
Sbjct: 303 ------TYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW--------DKKSGNPLLMLQG 348

Query: 219 RLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL 255
             N           S+     + A G+   +  +W  
Sbjct: 349 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 51/314 (16%)

Query: 19  SMDLESGRPLLAVAGSRAVIRIFSPA----FHACVRHFYGHGHAINELKFHPQDFNLLLS 74
            +D +S    L    +   I +++PA        +     H   +  +KF        L+
Sbjct: 22  DLDSQSVPDALKKQTNDYYI-LYNPALPREIDVELHKSLDHTSVVCCVKFSND--GEYLA 78

Query: 75  VSKDHTLRLWNIKTDICIAIFGG---------------VEGHRDEVLSADFDLLGTKIMS 119
              + T +++ +     +A                          + S  F   G  + +
Sbjct: 79  TGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 138

Query: 120 CGMDHSLKLWDLTKPEIKDACAESYTFNP----------------ARSTRPFDTQKEHFP 163
              D  +++WD+   +I                             R+ R +D +     
Sbjct: 139 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 198

Query: 164 QFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223
              + +     V      G ++ + S +  +  W       +     E   +        
Sbjct: 199 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS-----ETGFLVERLDSENESGTGH 253

Query: 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF------QILSHPRCMSAV 277
              ++ + F+ D   + +  G+      +W+L   +  S           +++      V
Sbjct: 254 KDSVYSVVFTRD--GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 311

Query: 278 RQTTLSKNGNVLLC 291
                ++N   +L 
Sbjct: 312 LSVATTQNDEYILS 325

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (121), Expect = 4e-08
 Identities = 44/250 (17%), Positives = 96/250 (38%), Gaps = 48/250 (19%)

Query: 13  FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
               A    ++     +       +++++ P    C+    GH + +  L+F       +
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG---IHV 190

Query: 73  LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
           +S S D ++R+W+++T  CI       GH+      +       ++S   D ++K+WD+ 
Sbjct: 191 VSGSLDTSIRVWDVETGNCIHTL---TGHQSLTSGMELK--DNILVSGNADSTVKIWDI- 244

Query: 133 KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN 192
                                      +        + H++ V C+++  +FV++ S + 
Sbjct: 245 ------------------------KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 280

Query: 193 CIICWKPGRLEDKELRTNETNVTIINRLNFK-DCEIWFIRFSMDYWQKILAVGNQSG--- 248
            +  W        +L+T E    ++   +      +W IR S    + + AVG+++G   
Sbjct: 281 TVKLW--------DLKTGEFIRNLVTLESGGSGGVVWRIRASNT--KLVCAVGSRNGTEE 330

Query: 249 -RTYVWDLDV 257
            +  V D DV
Sbjct: 331 TKLLVLDFDV 340

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (109), Expect = 1e-06
 Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 6/130 (4%)

Query: 8   LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ 67
            I       + +  +E    +L    + + ++I+      C++   G     + +     
Sbjct: 209 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 268

Query: 68  DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVE--GHRDEVLSADFDLLGTKIMSCGMDHS 125
           + N +++ S D T++LW++KT   I     +E  G    V                 + +
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328

Query: 126 ----LKLWDL 131
               L + D 
Sbjct: 329 EETKLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (109), Expect = 1e-06
 Identities = 33/229 (14%), Positives = 63/229 (27%), Gaps = 13/229 (5%)

Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
             +   GH   +          N ++S S D+TL++W+  T  C+       GH   V S
Sbjct: 8   SPKVLKGHDDHVITC-LQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTL---VGHTGGVWS 62

Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167
           +        I+  G           +          +T                    + 
Sbjct: 63  SQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELR-TNETNVTIINRLNFKDCE 226
           R        C+  L   V +  C             D  ++  +    T ++ L      
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179

Query: 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS 275
           ++ ++F        +  G+      VWD++  +         S    M 
Sbjct: 180 VYSLQFD----GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.1 bits (120), Expect = 4e-08
 Identities = 22/192 (11%), Positives = 41/192 (21%), Gaps = 4/192 (2%)

Query: 47  ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL 106
           +  +  YGH  AI  L     D   L S   +  +  W+I T I   +F   + H   + 
Sbjct: 3   SIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFP--DVHATMIT 59

Query: 107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166
                     + +   D  LK+       +  + A +   +            +      
Sbjct: 60  GIKTT-SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 118

Query: 167 TRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE 226
            + I       +  +     S                                       
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178

Query: 227 IWFIRFSMDYWQ 238
              I        
Sbjct: 179 PAEITSVAFSNN 190

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.8 bits (101), Expect = 1e-05
 Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 1/95 (1%)

Query: 38  IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
               +  F     + +    A         D   L + S D+++ +WN+       I   
Sbjct: 205 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIK 264

Query: 98  VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
              H    +++   L  T I+S G D ++K W++ 
Sbjct: 265 -GAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.4 bits (92), Expect = 1e-04
 Identities = 28/262 (10%), Positives = 66/262 (25%), Gaps = 4/262 (1%)

Query: 18  WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVS 76
            ++   +    L  A +   I  +  +     R F   H   I  +K   +    L +VS
Sbjct: 16  TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD--LFTVS 73

Query: 77  KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLTKPE 135
            D  L++         +          + L       G   ++ C    ++         
Sbjct: 74  WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 133

Query: 136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCII 195
                +     +  +       Q      +       + V  +    +        N   
Sbjct: 134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAF 193

Query: 196 CWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL 255
                +       +   N  + +  ++          S       LA G+      VW++
Sbjct: 194 LVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253

Query: 256 DVQDPSSIKFQILSHPRCMSAV 277
           +      I  +       +++V
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSV 275

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.6 bits (119), Expect = 7e-08
 Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 2/140 (1%)

Query: 58  AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKI 117
            I+   ++  D   +     +H + ++    +  + +   ++ H  +V   D+     +I
Sbjct: 9   PISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHE-LKEHNGQVTGVDWAPDSNRI 66

Query: 118 MSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC 177
           ++CG D +  +W L     K           AR  R    +K+      +R I   Y + 
Sbjct: 67  VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 126

Query: 178 VRWLGDFVLSKSCENCIICW 197
                     K      +  
Sbjct: 127 ENDWWVCKHIKKPIRSTVLS 146

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 21/226 (9%), Positives = 56/226 (24%), Gaps = 14/226 (6%)

Query: 14  YTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQDFNL 71
              AW+ D    R  +A+  +   + I+  +      V     H   +  + + P D N 
Sbjct: 11  SCHAWNKD----RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNR 65

Query: 72  LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
           +++   D    +W +K          +           +     K         + +   
Sbjct: 66  IVTCGTDRNAYVWTLKGRTWK-PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124

Query: 132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCE 191
            +        + +     +           +   S      +     R    ++      
Sbjct: 125 EQ------ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 178

Query: 192 NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW 237
                W       + +  + ++   ++ + F          S D  
Sbjct: 179 PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 224

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (116), Expect = 2e-07
 Identities = 30/258 (11%), Positives = 65/258 (25%), Gaps = 19/258 (7%)

Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
            V+        I+++K  P   +LLL  S D +L ++                ++  +L 
Sbjct: 3   IVQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61

Query: 108 ADFDLLGTKIMSCG----------------MDHSLKLWDLTKPEIKDACAESYTFNPARS 151
            +F       +  G                                    +      +  
Sbjct: 62  CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121

Query: 152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNE 211
                    ++        + N  +       F +  +    I+     +++   L   E
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181

Query: 212 TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP 271
            +   I     K           +  Q+  A  +  GR  V   D Q       +  +  
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKE--QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239

Query: 272 RCMSAVRQTTLSKNGNVL 289
                ++ T L+   N +
Sbjct: 240 CHRLNLKDTNLAYPVNSI 257

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 39  RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV 98
           + F+   H          + +N ++F P     L +   D  +  WN++T   I  F   
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAK- 291

Query: 99  EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
             + D V+          +     D + K        I+
Sbjct: 292 -FNEDSVVKIACS--DNILCLATSDDTFKTNAAIDQTIE 327

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.1 bits (115), Expect = 2e-07
 Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 2/86 (2%)

Query: 46  HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV 105
                                 D   + S S D T+++WN+ T              D+ 
Sbjct: 227 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 286

Query: 106 LSADFDLLGTKIMSCGMDHSLKLWDL 131
           L   +      ++S   +  +   + 
Sbjct: 287 LGIIWT--KQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.7 bits (88), Expect = 4e-04
 Identities = 17/238 (7%), Positives = 43/238 (18%), Gaps = 14/238 (5%)

Query: 31  VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90
              +   +             +  H H     K  P       S      +R+W+     
Sbjct: 33  QYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTT 91

Query: 91  CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPAR 150
            I +   +      V    +D    +I + G                     +       
Sbjct: 92  HI-LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMN 150

Query: 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLED------ 204
           S     ++       S  +    +              +     + + P           
Sbjct: 151 SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 210

Query: 205 -----KELRTNETNVTIINRLNFKDCEI-WFIRFSMDYWQKILAVGNQSGRTYVWDLD 256
                             +               +       +A  +      +W++ 
Sbjct: 211 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 268

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (110), Expect = 9e-07
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 38  IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
           IR++     AC+R   GH   +        D   ++S + D  +++W++   +      G
Sbjct: 200 IRLWDIECGACLRVLEGHEELVR---CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAG 256

Query: 98  ------VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
                 +  H   V    FD    +I+S   D ++ +WD
Sbjct: 257 TLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 5e-06
 Identities = 29/240 (12%), Positives = 65/240 (27%), Gaps = 9/240 (3%)

Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
            +         +  L++  Q    ++S  +D+T+++W+  T  C  I     GH   VL 
Sbjct: 7   RIHCRSETSKGVYCLQYDDQ---KIVSGLRDNTIKIWDKNTLECKRIL---TGHTGSVLC 60

Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167
             +D    +++  G   S                  +                     S 
Sbjct: 61  LQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 117

Query: 168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI 227
                     +      V  ++  N +       +     RT +   T            
Sbjct: 118 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH 177

Query: 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN 287
                 + Y  +++  G+      +WD++      +        RC+    +  +S   +
Sbjct: 178 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD 237

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (89), Expect = 4e-04
 Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 26/181 (14%)

Query: 38  IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
           I ++  A    +            +     D   ++S S D T+++WN  T   +     
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL-- 174

Query: 98  VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA-------- 149
             GH+  +    +      ++S   D++++LWD+                          
Sbjct: 175 -NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 231

Query: 150 ------RSTRPFDTQKEHFPQFSTRDI-------HRNYVDCVRWLGDFVLSKSCENCIIC 196
                    + +D      P+     +       H   V  +++    ++S S ++ I+ 
Sbjct: 232 VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILI 291

Query: 197 W 197
           W
Sbjct: 292 W 292

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (110), Expect = 1e-06
 Identities = 27/240 (11%), Positives = 58/240 (24%), Gaps = 21/240 (8%)

Query: 54  GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV---EGHRDEVLSADF 110
            H   I  +       +  +S S D  L++W+ K                H+  +   D 
Sbjct: 12  AHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68

Query: 111 -------DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163
                        + +      L  + +T+ +                 +        + 
Sbjct: 69  LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 128

Query: 164 QFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223
             S   +  + +      G   + K                  L    T  + +    F 
Sbjct: 129 -ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187

Query: 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS 283
                 +  S      ++A G  +G   + +L    P        S     +++R    S
Sbjct: 188 TS----VDISER---GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.8 bits (104), Expect = 6e-06
 Identities = 25/197 (12%), Positives = 55/197 (27%), Gaps = 22/197 (11%)

Query: 99  EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158
           + H  ++ S       +  +SC  D  LK+WD    + ++   +SY+             
Sbjct: 11  KAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYS------------- 55

Query: 159 KEHFPQFSTRDIHRNYVDCVRWLGD---FVLSKSCENCIICWKPGRLEDKELRTNETNVT 215
                   +   H + +  +         V + S    ++ ++  R ++ +    E    
Sbjct: 56  ---HFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDL 112

Query: 216 IINRLNFKDCEIWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM 274
           + + +            S D      L   +  G TY+W        S    +   P   
Sbjct: 113 LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE 172

Query: 275 SAVRQTTLSKNGNVLLC 291
                 +          
Sbjct: 173 LQGTVESPMTPSQFATS 189

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 25/247 (10%), Positives = 56/247 (22%), Gaps = 15/247 (6%)

Query: 55  HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG 114
           H   +  ++    +  L+ + S    L  + I  +            + ++L +D     
Sbjct: 65  HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV---IFEKLDLLDSDMKKHS 121

Query: 115 TKIMSCGMDHSLKLWDL-----TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
              +  G  +   L         K          +       T  +    E      +  
Sbjct: 122 FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 181

Query: 170 IHRNYVDCVRWLGDFVLSKSCENCII-----CWKPGRLEDKELRTNETNVTIINRLNFKD 224
               +   V      +++    N  +              +   +   N   I  + F  
Sbjct: 182 TPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 241

Query: 225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK 284
                           + +        +  L V   SS            S V   + + 
Sbjct: 242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA--HSSWVMSLSFND 299

Query: 285 NGNVLLC 291
           +G  L  
Sbjct: 300 SGETLCS 306

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.1 bits (107), Expect = 2e-06
 Identities = 13/87 (14%), Positives = 27/87 (31%)

Query: 45  FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE 104
                                  D     +V  D T+R+W++ T  C+  +   +     
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298

Query: 105 VLSADFDLLGTKIMSCGMDHSLKLWDL 131
                      +I+S  +D +L  ++L
Sbjct: 299 QQVGVVATGNGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 3e-04
 Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 12  NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI--NELKFHPQDF 69
                             A  G+ A IR++      CV+ +      +   ++       
Sbjct: 249 EPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN 308

Query: 70  NLLLSVSKDHTLRLWNI 86
             ++S+S D TL  + +
Sbjct: 309 GRIISLSLDGTLNFYEL 325

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 44.9 bits (104), Expect = 5e-06
 Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 8/117 (6%)

Query: 19  SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
           SM  E+G   L     R+      P  +  +          +                + 
Sbjct: 239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGE-FAAYYQGAPEK 297

Query: 79  HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
             L  +++KT         V   ++ +           +M    D  +  + L KPE
Sbjct: 298 GVLLKYDVKT-------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 3e-05
 Identities = 42/247 (17%), Positives = 81/247 (32%), Gaps = 8/247 (3%)

Query: 28  LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
            +       +IR++       +    GH   +  LK+      +L+S S D T+R+W+IK
Sbjct: 25  YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG--GILVSGSTDRTVRVWDIK 82

Query: 88  TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN 147
              C  +F G       +   ++  +   +     D++L +W L K        E + + 
Sbjct: 83  KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT-GSRDNTLHVWKLPKESSVPDHGEEHDY- 140

Query: 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKEL 207
                  F T +E+         H   V  V   G+ V+S S +N +I W   +++   +
Sbjct: 141 ----PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196

Query: 208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQI 267
            +  T+       + +                 L  G            V         +
Sbjct: 197 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFL 256

Query: 268 LSHPRCM 274
           +S     
Sbjct: 257 VSAAADG 263

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (97), Expect = 3e-05
 Identities = 26/230 (11%), Positives = 57/230 (24%), Gaps = 17/230 (7%)

Query: 48  CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
            ++   GH   I  L  +P     L+S S D  +  W+  +          + H + ++S
Sbjct: 5   VLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSS--------MHQDHSNLIVS 51

Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167
            D             D                   S   +   +    D        F+ 
Sbjct: 52  LDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTG 111

Query: 168 RDIHRN----YVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223
             I           V    ++V     E   I        +             + ++  
Sbjct: 112 DIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171

Query: 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC 273
             E +     +     +  + ++  +T  W       ++I ++       
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN 221

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (88), Expect = 4e-04
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 3/86 (3%)

Query: 45  FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE 104
           F     +      A         + +L+ + S D  + ++++K  + I     +  H+D 
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA--LNAHKDG 260

Query: 105 VLSADFDLLGTKIMSCGMDHSLKLWD 130
           V +  ++   + ++S G D  +K W+
Sbjct: 261 VNNLLWET-PSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (81), Expect = 0.003
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 3/76 (3%)

Query: 12  NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-FHACVRHFYGHGHAINELKFHPQDFN 70
                  + + E    L+A       I I+S       ++    H   +N L +     +
Sbjct: 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP--S 270

Query: 71  LLLSVSKDHTLRLWNI 86
            L+S   D  ++ WN+
Sbjct: 271 TLVSSGADACIKRWNV 286

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 36.3 bits (82), Expect = 0.003
 Identities = 21/259 (8%), Positives = 55/259 (21%), Gaps = 8/259 (3%)

Query: 22  LESGRPLLAVAGSRAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQDFNLLLSVSKDHT 80
           L++G   + V      + +   A     +                P +    +  +    
Sbjct: 4   LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63

Query: 81  LRLWNI---KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
           +   ++   K      +          + S      G ++ +                  
Sbjct: 64  IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK--- 120

Query: 138 DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICW 197
               E ++       +P  T       +  R      +         +  K+ +  +   
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP 180

Query: 198 KPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257
                       +            +   ++ I    D  Q   A  +        DL  
Sbjct: 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ-DPATADLLYGYLSVDLKT 239

Query: 258 QDPSSIKFQILSHPRCMSA 276
               + +F  L+       
Sbjct: 240 GKTHTQEFADLTELYFTGL 258

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.98
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.98
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.97
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.96
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.95
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.95
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.94
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.93
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.93
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.93
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.91
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.9
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.88
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.88
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.87
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.86
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.85
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.85
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.84
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.78
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.78
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.76
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.73
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.72
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.64
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.56
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.54
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.54
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.46
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.37
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.32
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.32
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.23
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.18
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.18
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.13
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.07
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.06
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.03
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.98
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.88
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.83
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.79
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.65
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.62
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.52
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.48
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.42
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.34
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.18
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.85
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.84
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.68
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.44
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.34
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.19
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.0
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.84
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.75
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.66
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.59
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.56
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.53
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.48
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	96.46
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.38
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.18
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.88
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.7
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.52
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.34
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	94.25
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	93.62
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.33
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.3
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	92.39
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	92.15
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	91.13
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	89.44
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	84.1
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	82.52

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1e-39  Score=259.29  Aligned_cols=247  Identities=11%  Similarity=0.107  Sum_probs=196.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      .+..++|+|++|+|+++    +||+|+.||.|+|||.++++  .+..+++|.++|.+++|+| ++++|++|+.|++|++|
T Consensus         4 ~~~~~pIt~~~~s~dg~----~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp-~~~~l~s~s~D~~i~vW   78 (371)
T d1k8kc_           4 SFLVEPISCHAWNKDRT----QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVW   78 (371)
T ss_dssp             ESCSSCCCEEEECTTSS----EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEE
T ss_pred             CCCCCCeEEEEECCCCC----EEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECC-CCCEEEEEECCCeEEEE
Confidence            45568999999999994    99999999999999998765  5677889999999999999 88999999999999999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      |+.++.....+. +.+|...|.+++|+|+++.|++++.|+.+++|++..........                       
T Consensus        79 d~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~-----------------------  134 (371)
T d1k8kc_          79 TLKGRTWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK-----------------------  134 (371)
T ss_dssp             EEETTEEEEEEE-CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE-----------------------
T ss_pred             eecccccccccc-cccccccccccccccccccceeecccCcceeeeeeccccccccc-----------------------
Confidence            998766443331 26789999999999999999999999999999988765332211                       


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc------CCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT------NETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                       .....|...|.+++|+  +.+|++|+.|++|++||...........      .......+.....|...+..++|  +|
T Consensus       135 -~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~  211 (371)
T d1k8kc_         135 -HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF--SA  211 (371)
T ss_dssp             -EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE--CS
T ss_pred             -ccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEe--ec
Confidence             1123488889999998  6799999999999999987654321111      11122345566677777776655  56


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++|++++.||.|++||+.++..    ...  ...|..+|.+++|+|||++|++
T Consensus       212 ~g~~l~s~~~d~~i~iwd~~~~~~----~~~--~~~~~~~v~s~~fs~d~~~la~  260 (371)
T d1k8kc_         212 NGSRVAWVSHDSTVCLADADKKMA----VAT--LASETLPLLAVTFITESSLVAA  260 (371)
T ss_dssp             SSSEEEEEETTTEEEEEEGGGTTE----EEE--EECSSCCEEEEEEEETTEEEEE
T ss_pred             ccccccccccCCcceEEeeecccc----eee--eecccccceeeeecCCCCEEEE
Confidence            699999999999999999998752    223  3367789999999999998864

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-38  Score=246.24  Aligned_cols=250  Identities=20%  Similarity=0.312  Sum_probs=194.5

Q ss_pred             Cceeeee-ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-------------
Q psy10348          2 STRYSLL-IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-------------   67 (291)
Q Consensus         2 ~~~~~~~-~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-------------   67 (291)
                      ++.+.+. |.++|++++|+|++    ++||+|+.||+|+|||+++++++..+.+|...|.+++|+|+             
T Consensus         8 ~~~~~L~GH~~~I~~l~~sp~~----~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~   83 (317)
T d1vyhc1           8 PEKYALSGHRSPVTRVIFHPVF----SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTI   83 (317)
T ss_dssp             SCSCEEECCSSCEEEEEECSSS----SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred             CccEEEcCCCCCeEEEEEcCCC----CEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccc
Confidence            3445554 89999999999998    49999999999999999999999999888888888887762             


Q ss_pred             ----------------------------CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEE
Q psy10348         68 ----------------------------DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS  119 (291)
Q Consensus        68 ----------------------------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  119 (291)
                                                  ++..+++++.|+.+++||+++++.+..+   .+|...+.+++|+|++.+|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~  160 (317)
T d1vyhc1          84 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIAS  160 (317)
T ss_dssp             CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---ECCSSCEEEEEECTTSSEEEE
T ss_pred             ccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEE---ccCCCcceeeecccCCCEEEE
Confidence                                        2456788888999999999999888887   789999999999999999999


Q ss_pred             EecCCcEEEEeccCchhhhhhcc------ccccCCCCccccccCccccCcccccccccCcceeEEEE-cCCEEEEecCCC
Q psy10348        120 CGMDHSLKLWDLTKPEIKDACAE------SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW-LGDFVLSKSCEN  192 (291)
Q Consensus       120 ~~~d~~i~v~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~  192 (291)
                      ++.|+.|++|++.+++....+..      .+.+.|.........             .......... .+.++++++.|+
T Consensus       161 ~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~d~  227 (317)
T d1vyhc1         161 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISE-------------ATGSETKKSGKPGPFLLSGSRDK  227 (317)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGG-------------CCSCC-------CCEEEEEETTS
T ss_pred             EeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeec-------------cccceeeeeccCCceeEeccCCC
Confidence            99999999999998876655432      111222211110000             0111111111 267899999999


Q ss_pred             eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc
Q psy10348        193 CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR  272 (291)
Q Consensus       193 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  272 (291)
                      .|++||+++++            .+..+.+|...+..++++  |++++|++|+.||.|++||+.+++.+    ..+.  +
T Consensus       228 ~i~~~~~~~~~------------~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~--~  287 (317)
T d1vyhc1         228 TIKMWDVSTGM------------CLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCM----KTLN--A  287 (317)
T ss_dssp             EEEEEETTTTE------------EEEEEECCSSCEEEEEEC--SSSSCEEEEETTTEEEEECCTTSCCC----EEEE--C
T ss_pred             EEEEEECCCCc------------EEEEEeCCCCCEEEEEEC--CCCCEEEEEECCCeEEEEECCCCcEE----EEEc--C
Confidence            99999998874            478888888888776655  66999999999999999999988643    3333  6


Q ss_pred             cccceeeeEEccCCceeeC
Q psy10348        273 CMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       273 ~~~~v~~~~~s~~g~~l~s  291 (291)
                      |.++|++++|+|++++|++
T Consensus       288 h~~~V~~~~~s~~~~~l~s  306 (317)
T d1vyhc1         288 HEHFVTSLDFHKTAPYVVT  306 (317)
T ss_dssp             CSSCEEEEEECSSSSCEEE
T ss_pred             CCCCEEEEEEcCCCCEEEE
Confidence            8899999999999999875

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.7e-38  Score=245.66  Aligned_cols=231  Identities=17%  Similarity=0.188  Sum_probs=189.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.++|++++|+|++    ++||+|+.||+|+|||+.+++.+..+..|..+|.+++|+| ++.++++|+.|+.+.+|+..
T Consensus        53 GH~~~I~~l~~s~~~----~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~d~~i~~~~~~  127 (340)
T d1tbga_          53 GHLAKIYAMHWGTDS----RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLK  127 (340)
T ss_dssp             CCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECT-TSSEEEEEETTCCEEEEESS
T ss_pred             CCCCCEEEEEECCCC----CEEEEEECCCceeeeecccceeEEEEecccccEEeeEeec-cceeeeeecccceeeccccc
Confidence            489999999999998    5999999999999999999999999999999999999999 89999999999999999965


Q ss_pred             Ccce----eeeec--------------------------------------cccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348         88 TDIC----IAIFG--------------------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDHS  125 (291)
Q Consensus        88 ~~~~----~~~~~--------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  125 (291)
                      ....    ...+.                                      ....+...+....+.+.+.++++++.|+.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  207 (340)
T d1tbga_         128 TREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS  207 (340)
T ss_dssp             SSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred             ccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCce
Confidence            4321    11110                                      01334556777888888999999999999


Q ss_pred             EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC
Q psy10348        126 LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       126 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      |++||+++++.+..+                            .+|...|++++|+  +++|++++.|+.|++||++...
T Consensus       208 v~i~d~~~~~~~~~~----------------------------~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~  259 (340)
T d1tbga_         208 AKLWDVREGMCRQTF----------------------------TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ  259 (340)
T ss_dssp             EEEEETTTTEEEEEE----------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             EEEEECCCCcEEEEE----------------------------eCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccc
Confidence            999999988765544                            3488999999998  7799999999999999998774


Q ss_pred             ccccccCCCceeeeeee--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeE
Q psy10348        204 DKELRTNETNVTIINRL--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT  281 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~  281 (291)
                      .            +..+  ..+...+..+  +++|++++|++|+.||.|++||+.+++.      .....+|.++|++++
T Consensus       260 ~------------~~~~~~~~~~~~i~~~--~~s~~~~~l~~g~~dg~i~iwd~~~~~~------~~~~~~H~~~V~~l~  319 (340)
T d1tbga_         260 E------------LMTYSHDNIICGITSV--SFSKSGRLLLAGYDDFNCNVWDALKADR------AGVLAGHDNRVSCLG  319 (340)
T ss_dssp             E------------EEEECCTTCCSCEEEE--EECSSSCEEEEEETTSCEEEEETTTCCE------EEEECCCSSCEEEEE
T ss_pred             c------------ccccccccccCceEEE--EECCCCCEEEEEECCCEEEEEECCCCcE------EEEEcCCCCCEEEEE
Confidence            4            3333  3344445554  5567799999999999999999998752      223347889999999


Q ss_pred             EccCCceeeC
Q psy10348        282 LSKNGNVLLC  291 (291)
Q Consensus       282 ~s~~g~~l~s  291 (291)
                      |+|++++|++
T Consensus       320 ~s~d~~~l~s  329 (340)
T d1tbga_         320 VTDDGMAVAT  329 (340)
T ss_dssp             ECTTSSCEEE
T ss_pred             EeCCCCEEEE
Confidence            9999999874

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.9e-38  Score=250.29  Aligned_cols=268  Identities=18%  Similarity=0.250  Sum_probs=196.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe------------------eeccceeEEEEecCC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY------------------GHGHAINELKFHPQD   68 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~   68 (291)
                      +.|.+.|+|++|+|++    ++||+|+ |+.|+|||+.+++.+..+.                  .|...|.+++|+| +
T Consensus        59 ~~H~~~V~~l~fs~dg----~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~  132 (388)
T d1erja_          59 LDHTSVVCCVKFSNDG----EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-D  132 (388)
T ss_dssp             EECSSCCCEEEECTTS----SEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-T
T ss_pred             CCCCCcEEEEEECCCC----CEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECC-C
Confidence            4689999999999998    4999986 8999999999988776654                  3556799999999 8


Q ss_pred             CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----c
Q psy10348         69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----S  143 (291)
Q Consensus        69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~  143 (291)
                      +++|++|+.||.|++||...++.+..+   .+|...|.+++|++++..+++++.++.+++||+++.........     .
T Consensus       133 ~~~l~s~~~dg~v~i~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~  209 (388)
T d1erja_         133 GKFLATGAEDRLIRIWDIENRKIVMIL---QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTT  209 (388)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEE
T ss_pred             CCcceeccccccccccccccccccccc---ccccccccccccccccccccccccceeeeeeecccccccccccccccccc
Confidence            999999999999999999999988887   78999999999999999999999999999999987765443321     1


Q ss_pred             cccCC-CCcccc----------ccCcccc-----CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        144 YTFNP-ARSTRP----------FDTQKEH-----FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       144 ~~~~~-~~~~~~----------~~~~~~~-----~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                      ..+.+ ++....          +......     ........+|...|.+++|+  +++|++++.|+.|++||++.....
T Consensus       210 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~  289 (388)
T d1erja_         210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK  289 (388)
T ss_dssp             EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred             ccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccc
Confidence            11222 211111          1111000     01112234688999999998  779999999999999999877654


Q ss_pred             ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeE----
Q psy10348        206 ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT----  281 (291)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~----  281 (291)
                      .................|...+..++++  |++++|++|+.||.|++||+.++++    ...  ..+|.+.|.+++    
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~sg~~dg~i~vwd~~~~~~----~~~--l~~H~~~V~~~~~~~~  361 (388)
T d1erja_         290 SDSKTPNSGTCEVTYIGHKDFVLSVATT--QNDEYILSGSKDRGVLFWDKKSGNP----LLM--LQGHRNSVISVAVANG  361 (388)
T ss_dssp             ---------CEEEEEECCSSCEEEEEEC--GGGCEEEEEETTSEEEEEETTTCCE----EEE--EECCSSCEEEEEECSS
T ss_pred             cccccccccceeeecccccceEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCcE----EEE--EeCCCCCEEEEEEecC
Confidence            3333333334455666777777766655  6699999999999999999998853    233  347888998886    


Q ss_pred             --EccCCceeeC
Q psy10348        282 --LSKNGNVLLC  291 (291)
Q Consensus       282 --~s~~g~~l~s  291 (291)
                        |+|++++||+
T Consensus       362 ~~~spd~~~l~s  373 (388)
T d1erja_         362 SSLGPEYNVFAT  373 (388)
T ss_dssp             CTTCTTCEEEEE
T ss_pred             cccCCCCCEEEE
Confidence              5778998874

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-37  Score=243.08  Aligned_cols=225  Identities=16%  Similarity=0.278  Sum_probs=193.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.+.|.+++|+|++    ++|++|+.||.|++||+..  .+....+..|...+.+++|+| ++.++++++.|+.|++|+
T Consensus        95 ~h~~~I~~v~~s~dg----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~~  169 (337)
T d1gxra_          95 NRDNYIRSCKLLPDG----CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWD  169 (337)
T ss_dssp             CTTSBEEEEEECTTS----SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred             CCCCcEEEEEEcCCC----CEEEEeeccccccccccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence            577889999999998    4999999999999999874  355677788999999999999 889999999999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      +.+++.....   ..|...|.+++|++++..+++++.|+.+++||+++++.+..+.                        
T Consensus       170 ~~~~~~~~~~---~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~------------------------  222 (337)
T d1gxra_         170 LHNQTLVRQF---QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD------------------------  222 (337)
T ss_dssp             TTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------------
T ss_pred             cccccccccc---cccccccccccccccccccccccccccccccccccceeecccc------------------------
Confidence            9999888777   7899999999999999999999999999999999887654433                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                           |...|.+++|+  ++++++++.|+.+++||++..+.             .....|...|..+++  +|++++|++
T Consensus       223 -----~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------------~~~~~~~~~i~~v~~--s~~g~~l~s  282 (337)
T d1gxra_         223 -----FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-------------YQLHLHESCVLSLKF--AYCGKWFVS  282 (337)
T ss_dssp             -----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-------------EEECCCSSCEEEEEE--CTTSSEEEE
T ss_pred             -----cccceEEEEEcccccccceecccccccccccccccc-------------ccccccccccceEEE--CCCCCEEEE
Confidence                 77889999998  77999999999999999987643             344567777776655  567999999


Q ss_pred             EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |+.||.|++||+.+++.+    ..   ..|.+.|.+++|+|+|++|++
T Consensus       283 ~s~Dg~i~iwd~~~~~~~----~~---~~~~~~v~~~~~s~d~~~l~t  323 (337)
T d1gxra_         283 TGKDNLLNAWRTPYGASI----FQ---SKESSSVLSCDISVDDKYIVT  323 (337)
T ss_dssp             EETTSEEEEEETTTCCEE----EE---EECSSCEEEEEECTTSCEEEE
T ss_pred             EeCCCeEEEEECCCCCEE----EE---ccCCCCEEEEEEeCCCCEEEE
Confidence            999999999999988532    22   246789999999999999874

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.1e-37  Score=241.45  Aligned_cols=232  Identities=11%  Similarity=0.110  Sum_probs=183.0

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeec--CCeEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSK--DHTLR   82 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~--dg~i~   82 (291)
                      ..|.+.|++++|+|++    ++||+|+.||.|+|||+.+++..  ..+..|.++|.+++|+| ++.+|++++.  +..++
T Consensus        55 ~~H~~~v~~~~~sp~g----~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~-d~~~l~~~~~~~~~~~~  129 (311)
T d1nr0a1          55 TEHSHQTTVAKTSPSG----YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGH  129 (311)
T ss_dssp             CCCSSCEEEEEECTTS----SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEE
T ss_pred             cCCCCCEEEEEEeCCC----CeEeccccCceEeeeeeeccccccccccccccCccccccccc-ccccccccccccccccc
Confidence            3688999999999998    49999999999999999887644  55788999999999999 8899998876  45699


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH  161 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (291)
                      +|++++++....+   .+|...|.+++|+|++++ |++|+.|+.|++||+++++....+                     
T Consensus       130 v~~~~~~~~~~~l---~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~---------------------  185 (311)
T d1nr0a1         130 VFLFDTGTSNGNL---TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF---------------------  185 (311)
T ss_dssp             EEETTTCCBCBCC---CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE---------------------
T ss_pred             ccccccccccccc---cccccccccccccccceeeeccccccccccccccccccccccc---------------------
Confidence            9999999888877   789999999999999885 788999999999999988755443                     


Q ss_pred             CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                             ..|..+|.++.|+  ++++++++.|+.|++||............     ......+|...|..++|  +|+++
T Consensus       186 -------~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-----~~~~~~~h~~~V~~~~~--s~~~~  251 (311)
T d1nr0a1         186 -------GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFED-----DSLKNVAHSGSVFGLTW--SPDGT  251 (311)
T ss_dssp             -------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBC-----TTSSSCSSSSCEEEEEE--CTTSS
T ss_pred             -------ccccccccccccCccccccccccccccccccccccccccccccc-----ccccccccccccccccc--CCCCC
Confidence                   3488899999998  78999999999999999987754211110     01123356677776655  57799


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEec-cccccceeeeEEccC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSH-PRCMSAVRQTTLSKN  285 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~  285 (291)
                      +|++|+.||.|+|||+++++.    ...+.. ......+.++.|+++
T Consensus       252 ~l~tgs~Dg~v~iwd~~t~~~----~~~l~~~~~~~~~~~~~~~~~~  294 (311)
T d1nr0a1         252 KIASASADKTIKIWNVATLKV----EKTIPVGTRIEDQQLGIIWTKQ  294 (311)
T ss_dssp             EEEEEETTSEEEEEETTTTEE----EEEEECCSSGGGCEEEEEECSS
T ss_pred             EEEEEeCCCeEEEEECCCCcE----EEEEECCCCccceEEEEEecCC
Confidence            999999999999999998843    333432 122334555555544

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-37  Score=239.34  Aligned_cols=227  Identities=16%  Similarity=0.223  Sum_probs=186.8

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce---eEE--EeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC---VRH--FYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~---~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .+.|.+.|+|++|+|++    ++||+|+ ||.|+|||+.++..   +..  ..+|.+.|.+++|+| ++++|++|+.||.
T Consensus        47 ~~~H~~~V~~v~fs~~g----~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~-dg~~l~s~~~dg~  120 (337)
T d1gxra_          47 TLNHGEVVCAVTISNPT----RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEAST  120 (337)
T ss_dssp             EECCSSCCCEEEECSSS----SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSE
T ss_pred             ECCCCCcEEEEEECCCC----CEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcC-CCCEEEEeecccc
Confidence            55789999999999999    5999987 89999999976532   222  347889999999999 8999999999999


Q ss_pred             EEEEECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348         81 LRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ  158 (291)
Q Consensus        81 i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (291)
                      |++||+....  ....+   ..|...+.+++|+|++.++++++.|+.|++||+++++.....                  
T Consensus       121 i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~------------------  179 (337)
T d1gxra_         121 LSIWDLAAPTPRIKAEL---TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF------------------  179 (337)
T ss_dssp             EEEEECCCC--EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------
T ss_pred             ccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccc------------------
Confidence            9999987543  34444   689999999999999999999999999999999987754332                  


Q ss_pred             cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348        159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY  236 (291)
Q Consensus       159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  236 (291)
                                ..|...|.+++|+  +..+++++.|+.+++||+++.+.            +..+. +...+..+  +++|
T Consensus       180 ----------~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~------------~~~~~-~~~~i~~l--~~~~  234 (337)
T d1gxra_         180 ----------QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ------------LQQHD-FTSQIFSL--GYCP  234 (337)
T ss_dssp             ----------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------------EEEEE-CSSCEEEE--EECT
T ss_pred             ----------ccccccccccccccccccccccccccccccccccccee------------ecccc-cccceEEE--EEcc
Confidence                      2488889999998  77999999999999999988743            44443 44556555  4567


Q ss_pred             CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      ++++|++|+.||.|++||+.+.+.       .....|...|++++|+|+|++|++
T Consensus       235 ~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~~~~~~i~~v~~s~~g~~l~s  282 (337)
T d1gxra_         235 TGEWLAVGMESSNVEVLHVNKPDK-------YQLHLHESCVLSLKFAYCGKWFVS  282 (337)
T ss_dssp             TSSEEEEEETTSCEEEEETTSSCE-------EEECCCSSCEEEEEECTTSSEEEE
T ss_pred             cccccceecccccccccccccccc-------ccccccccccceEEECCCCCEEEE
Confidence            799999999999999999998742       233478889999999999999874

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3e-37  Score=238.99  Aligned_cols=233  Identities=10%  Similarity=0.073  Sum_probs=191.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .+.+...+++++|+++    .||.+. ++.|.+|++++++..+.+.+|...|++++|+| ++++|++|+.||+|++||+.
T Consensus        15 ~~r~~~~~~a~~~~g~----~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp-~g~~latg~~dg~i~iwd~~   88 (311)
T d1nr0a1          15 TARGTAVVLGNTPAGD----KIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTT   88 (311)
T ss_dssp             CCTTCCCCCEECTTSS----EEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESS
T ss_pred             CCCCCeEEEEEcCCCC----EEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeC-CCCeEeccccCceEeeeeee
Confidence            3445667889999985    788775 56799999999999999999999999999999 89999999999999999998


Q ss_pred             Cccee--eeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348         88 TDICI--AIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP  163 (291)
Q Consensus        88 ~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
                      ++...  ..+   ..|..+|.+++|+|++++|++++.  +..+++|++++++....+                       
T Consensus        89 ~~~~~~~~~~---~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l-----------------------  142 (311)
T d1nr0a1          89 QTTHILKTTI---PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNL-----------------------  142 (311)
T ss_dssp             STTCCEEEEE---ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCC-----------------------
T ss_pred             cccccccccc---ccccCccccccccccccccccccccccccccccccccccccccc-----------------------
Confidence            87654  334   689999999999999999999886  466999999987755443                       


Q ss_pred             ccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348        164 QFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI  240 (291)
Q Consensus       164 ~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (291)
                           .+|...|.+++|+  ++ .+++|+.|+.|++||+++.+            ....+..|...|..+.+  +|++++
T Consensus       143 -----~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~------------~~~~~~~~~~~i~~v~~--~p~~~~  203 (311)
T d1nr0a1         143 -----TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK------------FKSTFGEHTKFVHSVRY--NPDGSL  203 (311)
T ss_dssp             -----CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE------------EEEEECCCSSCEEEEEE--CTTSSE
T ss_pred             -----cccccccccccccccceeeecccccccccccccccccc------------ccccccccccccccccc--Cccccc
Confidence                 3488899999998  44 58899999999999998874            36777788888877665  467999


Q ss_pred             EEEEcCCCcEEEEEcCCCCCCcceeE-EEeccccccceeeeEEccCCceeeC
Q psy10348        241 LAVGNQSGRTYVWDLDVQDPSSIKFQ-ILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       241 l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      |++++.||.|++||+.++........ .....+|.+.|++++|+|+|++|++
T Consensus       204 l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t  255 (311)
T d1nr0a1         204 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS  255 (311)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccCCCCCEEEE
Confidence            99999999999999998753211100 0112368889999999999999975

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.8e-34  Score=222.15  Aligned_cols=240  Identities=15%  Similarity=0.153  Sum_probs=167.9

Q ss_pred             eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      +...-|.++|++++|+|++    ++|++|+.||.|++||+++++.++.+. .|...|++++|+| ++. +++++.|+.++
T Consensus         6 ~~~~GH~~~V~~l~~s~dg----~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~-~g~-~~~~~~d~~v~   79 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSADG----KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS-KGD-LFTVSWDDHLK   79 (299)
T ss_dssp             EEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT-TSC-EEEEETTTEEE
T ss_pred             eEcCCCCCCcEEEEECCCC----CEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeec-cce-eecccceeeEE
Confidence            3455689999999999998    599999999999999999999888774 7899999999999 776 45667799999


Q ss_pred             EEECCCcceeeeeccccCCCCce-------------------------------------EEEEEccCCCEEEEEecCCc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEV-------------------------------------LSADFDLLGTKIMSCGMDHS  125 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i-------------------------------------~~~~~~~~~~~l~~~~~d~~  125 (291)
                      +|+...............+...+                                     .+++|+|++++|++++.||.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~  159 (299)
T d1nr0a2          80 VVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK  159 (299)
T ss_dssp             EECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE
T ss_pred             EeccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99976432111000001233334                                     44555555555555555555


Q ss_pred             EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC
Q psy10348        126 LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       126 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      |++||+++++...                           .....|...|.+++|+  +++|++++.|+.|++||+.+..
T Consensus       160 i~~~d~~~~~~~~---------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~  212 (299)
T d1nr0a2         160 VHVYKLSGASVSE---------------------------VKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF  212 (299)
T ss_dssp             EEEEEEETTEEEE---------------------------EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT
T ss_pred             ccccccccccccc---------------------------cccccccccccccccccccccccccccccccccccccccc
Confidence            5555554433211                           1113488899999998  7799999999999999987764


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      ..         .....+..|...|..+++  +|++++|++|+.||.|++||+.++....   .......+...+.+++|.
T Consensus       213 ~~---------~~~~~~~~h~~~v~~l~~--s~~~~~l~sgs~dg~i~iwd~~~~~~~~---~~~~~~~~~~~v~~~~~~  278 (299)
T d1nr0a2         213 EL---------AHTNSWTFHTAKVACVSW--SPDNVRLATGSLDNSVIVWNMNKPSDHP---IIIKGAHAMSSVNSVIWL  278 (299)
T ss_dssp             EE---------SCCCCCCCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTCTTSCC---EEETTSSTTSCEEEEEEE
T ss_pred             cc---------cccccccccccccccccc--cccccceEEEcCCCEEEEEECCCCCcce---EEEecCCCCCcEEEEEEC
Confidence            42         224456667777777655  5779999999999999999999875432   233333445567777664


Q ss_pred             cCCceeeC
Q psy10348        284 KNGNVLLC  291 (291)
Q Consensus       284 ~~g~~l~s  291 (291)
                       ++++|++
T Consensus       279 -~~~~l~s  285 (299)
T d1nr0a2         279 -NETTIVS  285 (299)
T ss_dssp             -ETTEEEE
T ss_pred             -CCCEEEE
Confidence             4566653

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-34  Score=221.84  Aligned_cols=259  Identities=17%  Similarity=0.258  Sum_probs=169.5

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .-.|++.|.+ ++++++    ++||+|+.||+|+|||+.++++++.+.+|.+.|.+++|+|   .+|++|+.|+.+++|+
T Consensus        12 l~GH~~~V~s-~~~~~g----~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~---~~l~s~s~D~~~~~~~   83 (342)
T d2ovrb2          12 LKGHDDHVIT-CLQFCG----NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWN   83 (342)
T ss_dssp             EECSTTSCEE-EEEEET----TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEE
T ss_pred             ECCcCCceEE-EEEECC----CEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCC---Cccccceecccccccc
Confidence            3468888865 467777    4999999999999999999999999999999999999998   3899999999999999


Q ss_pred             CCCcceeeeeccccCCCCce--------------------------------------EEEEEccCCCEEEEEecCCcEE
Q psy10348         86 IKTDICIAIFGGVEGHRDEV--------------------------------------LSADFDLLGTKIMSCGMDHSLK  127 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i--------------------------------------~~~~~~~~~~~l~~~~~d~~i~  127 (291)
                      ...........   .+...+                                      ....+.+....+++++.|+.++
T Consensus        84 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  160 (342)
T d2ovrb2          84 AETGECIHTLY---GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK  160 (342)
T ss_dssp             TTTTEEEEEEC---CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred             cccccceeccc---ccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEE
Confidence            76543322210   000000                                      0011122333455555555666


Q ss_pred             EEeccCchhhhhhccc----cccCCC----------CccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCe
Q psy10348        128 LWDLTKPEIKDACAES----YTFNPA----------RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENC  193 (291)
Q Consensus       128 v~d~~~~~~~~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~  193 (291)
                      +||++..+.+..+..+    ....++          +....+...  .........+|...+.++.+++++|++++.|+.
T Consensus       161 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~--~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~  238 (342)
T d2ovrb2         161 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE--TGNCIHTLTGHQSLTSGMELKDNILVSGNADST  238 (342)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETT--TCCEEEEECCCCSCEEEEEEETTEEEEEETTSC
T ss_pred             EeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecc--cceeeeEecccccceeEEecCCCEEEEEcCCCE
Confidence            6655554444333221    000001          111111110  011223345688899999999999999999999


Q ss_pred             EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc
Q psy10348        194 IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC  273 (291)
Q Consensus       194 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  273 (291)
                      |++||+...+..         ..+.....+...+  .++.++  +.++++|+.||+|++||+++++.++.. ......+|
T Consensus       239 i~iwd~~~~~~~---------~~~~~~~~~~~~~--~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~-~~~~~~~~  304 (342)
T d2ovrb2         239 VKIWDIKTGQCL---------QTLQGPNKHQSAV--TCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNL-VTLESGGS  304 (342)
T ss_dssp             EEEEETTTCCEE---------EEECSTTSCSSCE--EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-EECTTGGG
T ss_pred             EEEEeccccccc---------ccccccceeeece--eecccC--CCeeEEEcCCCEEEEEECCCCCEEEEE-ecccCCCC
Confidence            999999877542         1122222233333  345555  789999999999999999998644221 11223467


Q ss_pred             ccceeeeEEccCCceeeC
Q psy10348        274 MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~s  291 (291)
                      .+.|++++|+|++.+||+
T Consensus       305 ~~~v~~v~~s~~~~~la~  322 (342)
T d2ovrb2         305 GGVVWRIRASNTKLVCAV  322 (342)
T ss_dssp             TCEEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEECCCCCEEEE
Confidence            889999999999998874

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.6e-34  Score=220.68  Aligned_cols=233  Identities=15%  Similarity=0.161  Sum_probs=178.5

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--------EEeeeccceeEEEEecCCCcEEEEeec--C
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--------HFYGHGHAINELKFHPQDFNLLLSVSK--D   78 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~~l~s~~~--d   78 (291)
                      +...|++++|+|+.  ++.+||+|+.||+|+|||+..++...        .+..|.++|.+++|++ ++.++++++.  +
T Consensus        62 ~~~~v~~v~fsP~~--~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~~~~  138 (325)
T d1pgua1          62 GSSVVTTVKFSPIK--GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRD  138 (325)
T ss_dssp             TTSCEEEEEECSST--TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSS
T ss_pred             CCCCEEEEEEeeCC--CCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECC-CCCccceeecccc
Confidence            35789999999854  23699999999999999987654332        3446778999999999 8888887654  6


Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                      +.+.+|+.++++.+..+   .+|...|.+++|+|++.+ +++++.|+.+++||+...+......                
T Consensus       139 ~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~----------------  199 (325)
T d1pgua1         139 NFGVFISWDSGNSLGEV---SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR----------------  199 (325)
T ss_dssp             CSEEEEETTTCCEEEEC---CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC----------------
T ss_pred             ceEEEEeecccccceee---eecccccccccccccccceEEEeecccccccccccccccceecc----------------
Confidence            78999999999988888   789999999999999875 6789999999999988766443221                


Q ss_pred             ccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM  234 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  234 (291)
                               ....|...|.+++|+   +.++++++.|+.|++||+++++.            +..+..|...+..+.+++
T Consensus       200 ---------~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~------------~~~l~~~~~~v~~~~~s~  258 (325)
T d1pgua1         200 ---------THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF------------LKYIEDDQEPVQGGIFAL  258 (325)
T ss_dssp             ---------SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE------------EEECCBTTBCCCSCEEEE
T ss_pred             ---------cccCCCCccEEeeeccccceeccccccccceeeeeeccccc------------cccccccccccccceeee
Confidence                     123478889999997   56899999999999999988744            677777777665555543


Q ss_pred             c-CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceee--eEEccCCce
Q psy10348        235 D-YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQ--TTLSKNGNV  288 (291)
Q Consensus       235 ~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~g~~  288 (291)
                      . |++++|++++.|+.|+|||+.+++.    ...+....+...+..  +.|.+++.+
T Consensus       259 ~~~dg~~l~s~s~D~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (325)
T d1pgua1         259 SWLDSQKFATVGADATIRVWDVTTSKC----VQKWTLDKQQLGNQQVGVVATGNGRI  311 (325)
T ss_dssp             EESSSSEEEEEETTSEEEEEETTTTEE----EEEEECCTTCGGGCEEEEEEEETTEE
T ss_pred             eccCCCEEEEEeCCCeEEEEECCCCCE----EEEEEecCCcccCeEEEEEECCCCEE
Confidence            3 6799999999999999999998853    344443344434444  444444443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-33  Score=221.35  Aligned_cols=216  Identities=22%  Similarity=0.344  Sum_probs=160.4

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|++++|+|++    ++|++|+.||.|++||..+++.+..+.+|...|.+++|++ ++..+++++.++.+++||.+
T Consensus       119 ~~~~~V~~l~~s~~~----~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~i~~~d~~  193 (388)
T d1erja_         119 SSDLYIRSVCFSPDG----KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLR  193 (388)
T ss_dssp             CCCCBEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             CCCCCEEEEEECCCC----Ccceeccccccccccccccccccccccccccccccccccc-ccccccccccceeeeeeecc
Confidence            467789999999998    5999999999999999999999999999999999999887 66666666666666666655


Q ss_pred             Cc------------------------------------------ceeeeec----cccCCCCceEEEEEccCCCEEEEEe
Q psy10348         88 TD------------------------------------------ICIAIFG----GVEGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        88 ~~------------------------------------------~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      +.                                          .....+.    ...+|...|.+++|+|++++|++++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~  273 (388)
T d1erja_         194 TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS  273 (388)
T ss_dssp             TTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred             ccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence            43                                          3222221    1235677788888888888888888


Q ss_pred             cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecC
Q psy10348        122 MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKP  199 (291)
Q Consensus       122 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~  199 (291)
                      .||.|++||++++.........                ...........|...|.+++|+  +++|++|+.||.|++||+
T Consensus       274 ~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~  337 (388)
T d1erja_         274 LDRSVKLWNLQNANNKSDSKTP----------------NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK  337 (388)
T ss_dssp             TTSEEEEEEC-------------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred             CCCcEEEEeccCCccccccccc----------------cccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            8888888888766544322110                0001122234588899999998  779999999999999999


Q ss_pred             CCCCccccccCCCceeeeeeecCCcccEEEEEEE----ecCCCcEEEEEcCCCcEEEEEcC
Q psy10348        200 GRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS----MDYWQKILAVGNQSGRTYVWDLD  256 (291)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~l~~~~~dg~i~vwd~~  256 (291)
                      ++++.            +..+.+|...|..++++    ++|++.+|++|+.||+|+||+++
T Consensus       338 ~~~~~------------~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         338 KSGNP------------LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             TTCCE------------EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             CCCcE------------EEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            98744            78899999999988765    46889999999999999999985

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.2e-32  Score=215.85  Aligned_cols=220  Identities=11%  Similarity=0.105  Sum_probs=170.5

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|.++|++++|+|++    ++|++|+.|++|+|||+.++...  ..+.+|...|.+++|+| +++.|++|+.|+.|++|+
T Consensus        49 gH~~~V~~l~fsp~~----~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~s~d~~i~i~~  123 (371)
T d1k8kc_          49 EHNGQVTGVDWAPDS----NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICY  123 (371)
T ss_dssp             CCSSCEEEEEEETTT----TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEE
T ss_pred             CCCCCEEEEEECCCC----CEEEEEECCCeEEEEeeccccccccccccccccccccccccc-ccccceeecccCcceeee
Confidence            478999999999998    49999999999999999876544  34467889999999999 899999999999999999


Q ss_pred             CCCcceeeee-ccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKTDICIAIF-GGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      +......... .....|...|.+++|+|++++|++|+.|+++++||+...........          ..+.........
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~  193 (371)
T d1k8kc_         124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP----------TPWGSKMPFGEL  193 (371)
T ss_dssp             EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCC----------BTTBSCCCTTCE
T ss_pred             eecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCcccccccc----------ccccccccceee
Confidence            8765533221 12367899999999999999999999999999999877653322110          011111111122


Q ss_pred             cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                      ......|...|.+++|+  +++|++++.|+.|++||+.....            +..+..+..++..++|++  ++++|+
T Consensus       194 ~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~------------~~~~~~~~~~v~s~~fs~--d~~~la  259 (371)
T d1k8kc_         194 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA------------VATLASETLPLLAVTFIT--ESSLVA  259 (371)
T ss_dssp             EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE------------EEEEECSSCCEEEEEEEE--TTEEEE
T ss_pred             eeeccCccCcEEEEEeecccccccccccCCcceEEeeecccc------------eeeeecccccceeeeecC--CCCEEE
Confidence            33445688999999998  78999999999999999987744            777888888888877765  488888


Q ss_pred             EEcCCCcEEEEEcCC
Q psy10348        243 VGNQSGRTYVWDLDV  257 (291)
Q Consensus       243 ~~~~dg~i~vwd~~~  257 (291)
                      +|+ |+.+++|....
T Consensus       260 ~g~-d~~~~~~~~~~  273 (371)
T d1k8kc_         260 AGH-DCFPVLFTYDS  273 (371)
T ss_dssp             EET-TSSCEEEEEET
T ss_pred             EEc-CCceEEEEeeC
Confidence            766 67777776543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-31  Score=208.13  Aligned_cols=272  Identities=7%  Similarity=-0.027  Sum_probs=177.7

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee---EEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV---RHFYGHGHAINELKFHPQDFNLLLSVSKDHTL   81 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i   81 (291)
                      +.-.|++.|++++|+|++    ++||+|+.||+|+|||++++...   ....+|..+|.+++|+|.++.+|++|+.||.|
T Consensus         6 ~~~~h~d~I~~l~fsp~~----~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSK----SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGG----TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             cCCCCCCCEEEEEEeCCC----CEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence            344688999999999999    49999999999999998765433   33346999999999999567799999999999


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc------------CCC
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF------------NPA  149 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~------------~~~  149 (291)
                      ++|++..+.......  ..+........+.++...+++++.|+.+++||++.+............            .+.
T Consensus        82 ~~w~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (342)
T d1yfqa_          82 LKVDLIGSPSFQALT--NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN  159 (342)
T ss_dssp             EEECSSSSSSEEECB--SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred             eeeeccccccccccc--ccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeecc
Confidence            999999877766652  334444556667778889999999999999999766544333221110            011


Q ss_pred             ----------CccccccCcccc-CcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCcee
Q psy10348        150 ----------RSTRPFDTQKEH-FPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVT  215 (291)
Q Consensus       150 ----------~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  215 (291)
                                +....+...... .........+...+.+..+.   +..+++++.||.+.+|+.................
T Consensus       160 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~  239 (342)
T d1yfqa_         160 SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR  239 (342)
T ss_dssp             SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred             CCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceee
Confidence                      111111110000 01111112233445555554   6689999999999999986554321111110000


Q ss_pred             e---eeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        216 I---INRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       216 ~---~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .   ......+...+.+  ++++|++++||+|+.||.|++||+.+++.    +..+.   +...+..++|+|+|++|++
T Consensus       240 ~~~~~~~~~~~~~~v~~--l~~sp~~~~lasg~~Dg~v~vWD~~~~~~----l~~~~---~~~~~~~~~~s~~~~~l~~  309 (342)
T d1yfqa_         240 CHRLNLKDTNLAYPVNS--IEFSPRHKFLYTAGSDGIISCWNLQTRKK----IKNFA---KFNEDSVVKIACSDNILCL  309 (342)
T ss_dssp             CCCCCTTCCSSCCCEEE--EEECTTTCCEEEEETTSCEEEEETTTTEE----EEECC---CCSSSEEEEEEECSSEEEE
T ss_pred             eeeeccCCCccccccee--EEecCCccEEEEECCCCEEEEEECCCCcE----EEEec---CCCCCEEEEEEeCCCEEEE
Confidence            0   1112233444554  45567799999999999999999998742    22222   2235566888999998863

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-30  Score=204.64  Aligned_cols=253  Identities=20%  Similarity=0.278  Sum_probs=182.6

Q ss_pred             Cceeeee-eccee-EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348          2 STRYSLL-IEENF-YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH   79 (291)
Q Consensus         2 ~~~~~~~-~~~~i-~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg   79 (291)
                      |++..+. |.+.| +|++  +++    ++||+|+.||+|+|||+.+++++..+++|+++|.+++|+| + .+|++|+.|+
T Consensus         3 p~~~tL~GH~~~vitc~~--~~~----~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~-~-~~l~s~s~D~   74 (355)
T d1nexb2           3 PQRTTLRGHMTSVITCLQ--FED----NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-G-GILVSGSTDR   74 (355)
T ss_dssp             CEEEEEECCSSSCEEEEE--EET----TEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEET-T-TEEEEEETTC
T ss_pred             CCcEEECCcCCCcEEEEE--ECC----CEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcC-C-CEEEEEeccc
Confidence            3344443 77775 5554  456    4999999999999999999999999999999999999998 5 5899999999


Q ss_pred             eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      .|++|++...+....... ..+........+.+++.++++++.|+.|++||+++.............     ........
T Consensus        75 ~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----~~~~~~~~  148 (355)
T d1nexb2          75 TVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY-----PLVFHTPE  148 (355)
T ss_dssp             CEEEEETTTTEEEEEECC-CSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CC-----CEEESCTT
T ss_pred             cccccccccccccccccc-ccccccccccccccccceeeeecCCCcEEEEEccCCceecccccccee-----ccceeccc
Confidence            999999998877665521 334455666778889999999999999999999887755433211000     00000111


Q ss_pred             ccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                      ...........|...+.....++++++++..|+.|++||+++.+.            +.....+...+....+.  |++.
T Consensus       149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~  214 (355)
T d1nexb2         149 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC------------LYILSGHTDRIYSTIYD--HERK  214 (355)
T ss_dssp             TCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEE------------EEEECCCSSCEEEEEEE--TTTT
T ss_pred             cccceeeeeeeccccccccccccceeeeecccceeeeeecccccc------------eeeeecccccccccccc--ccce
Confidence            111122233456777777777899999999999999999988743            66666666666555554  6699


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++++++.||.|++||+.++..      .....+|...|.+++|++  ++|+
T Consensus       215 ~~~~~~~d~~i~i~d~~~~~~------~~~~~~h~~~v~~~~~~~--~~l~  257 (355)
T d1nexb2         215 RCISASMDTTIRIWDLENGEL------MYTLQGHTALVGLLRLSD--KFLV  257 (355)
T ss_dssp             EEEEEETTSCEEEEETTTCCE------EEEECCCSSCCCEEEECS--SEEE
T ss_pred             eeecccccceEEeeecccccc------cccccccccccccccccc--ceee
Confidence            999999999999999998752      233447888999999975  4444

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-31  Score=206.51  Aligned_cols=198  Identities=21%  Similarity=0.334  Sum_probs=176.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ..|...+.++.|+|+++    .+++++.|+.+++||+++++.+..+.+|...+.+++|+| ++.+|++++.|+.|++|++
T Consensus        98 ~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~~~~~  172 (317)
T d1vyhc1          98 HGHDHNVSSVSIMPNGD----HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVV  172 (317)
T ss_dssp             CCCSSCEEEEEECSSSS----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred             ccccccceeeeccCCCc----eEEeeccCcceeEeecccceeeeEEccCCCcceeeeccc-CCCEEEEEeCCCeEEEEee
Confidence            34678899999999984    999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCC--------------------CEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLG--------------------TKIMSCGMDHSLKLWDLTKPEIKDACAESYTF  146 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  146 (291)
                      .+++....+   ..|...+.++.|+|++                    ..+++++.|+.|++||+++++.+..+.     
T Consensus       173 ~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-----  244 (317)
T d1vyhc1         173 ATKECKAEL---REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-----  244 (317)
T ss_dssp             TTCCEEEEE---CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-----
T ss_pred             ccceeeEEE---ecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEe-----
Confidence            999988888   7899999999998753                    468999999999999999988665543     


Q ss_pred             CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348        147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD  224 (291)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (291)
                                             +|...|.+++|+  +++|++++.||.|++||+.+++.            +..+.+|.
T Consensus       245 -----------------------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~h~  289 (317)
T d1vyhc1         245 -----------------------GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC------------MKTLNAHE  289 (317)
T ss_dssp             -----------------------CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC------------CEEEECCS
T ss_pred             -----------------------CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcE------------EEEEcCCC
Confidence                                   488999999998  77999999999999999988754            78888899


Q ss_pred             ccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348        225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWD  254 (291)
Q Consensus       225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd  254 (291)
                      ..|+.++|  +|++++|++|+.||+|++||
T Consensus       290 ~~V~~~~~--s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         290 HFVTSLDF--HKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SCEEEEEE--CSSSSCEEEEETTSEEEEEC
T ss_pred             CCEEEEEE--cCCCCEEEEEeCCCeEEEeC
Confidence            88887765  46699999999999999997

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-31  Score=202.07  Aligned_cols=250  Identities=17%  Similarity=0.294  Sum_probs=165.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|...|+|++|  ++    ++||+|+.||+|+|||++++++++.+++|.++|++++|+   +++|++|+.|+.|++|++.
T Consensus        13 ~~~~~V~c~~~--d~----~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~---~~~l~s~s~D~~i~~~~~~   83 (293)
T d1p22a2          13 ETSKGVYCLQY--DD----QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVN   83 (293)
T ss_dssp             SSCCCEEEEEC--CS----SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEESS
T ss_pred             CCCCCEEEEEE--cC----CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecc---cceeecccccccccccccc
Confidence            46678988765  56    499999999999999999999999999999999998875   4799999999999999998


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh---hhhhcc------ccc--------cCCCC
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI---KDACAE------SYT--------FNPAR  150 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~------~~~--------~~~~~  150 (291)
                      .+......   ..+....  ..+.+....++++..++.+++||......   ...+..      ...        ...++
T Consensus        84 ~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~  158 (293)
T d1p22a2          84 TGEMLNTL---IHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR  158 (293)
T ss_dssp             SCCEEEEE---CCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred             cccccccc---ccccccc--ccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCC
Confidence            87665544   1222221  12233344555555555555555543221   010000      000        00011


Q ss_pred             ccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348        151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI  230 (291)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (291)
                      ....+....  ........++...+..+.+++.++++++.|+.|++||+++...            +..+..+...+.. 
T Consensus       159 ~i~~~d~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------~~~~~~~~~~v~~-  223 (293)
T d1p22a2         159 TIKVWNTST--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC------------LRVLEGHEELVRC-  223 (293)
T ss_dssp             EEEEEETTT--CCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEE-
T ss_pred             ceeeecCCC--CcEEEEEcccccccccccCCCCeEEEecCCCEEEEEeccccee------------eeeecccceeeee-
Confidence            111111100  1122233457788899999999999999999999999988744            6666666665543 


Q ss_pred             EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc---ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS---IKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                       +.  +++.+|++|+.||.|++||+.......   .........+|.+.|++++|+  +++|++
T Consensus       224 -~~--~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s  282 (293)
T d1p22a2         224 -IR--FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVS  282 (293)
T ss_dssp             -EE--CCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEE
T ss_pred             -cc--ccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEE
Confidence             33  458999999999999999987543211   111223345789999999995  456653

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.8e-30  Score=202.76  Aligned_cols=223  Identities=18%  Similarity=0.227  Sum_probs=169.0

Q ss_pred             ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcE
Q psy10348         47 ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL  126 (291)
Q Consensus        47 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  126 (291)
                      +..+++++|.++|++++|+| ++.+||+|+.||+|+|||+.+++.+..+   ..|..+|.+++|+|++.++++|+.|+.+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~-~~~~l~sgs~Dg~v~iWd~~~~~~~~~~---~~~~~~v~~v~~~~~~~~l~~~~~d~~i  121 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAI---PLRSSWVMTCAYAPSGNYVACGGLDNIC  121 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEE---ECSCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred             eeeEEECCCCCCEEEEEECC-CCCEEEEEECCCceeeeecccceeEEEE---ecccccEEeeEeeccceeeeeeccccee
Confidence            45678999999999999999 9999999999999999999999998888   7899999999999999999999999999


Q ss_pred             EEEeccCchhhhhhccccccCCCC---------cccccc--------CccccCcccccccccCcceeEEEEc--CCEEEE
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPAR---------STRPFD--------TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS  187 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~---------~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  187 (291)
                      ++|+....................         ......        ..............+...+....+.  +.++++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (340)
T d1tbga_         122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS  201 (340)
T ss_dssp             EEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             ecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEE
Confidence            999987655433222111000000         000000        0000001111223355566677776  678999


Q ss_pred             ecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEE
Q psy10348        188 KSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQI  267 (291)
Q Consensus       188 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  267 (291)
                      ++.|+.|++||+++.+            .+..+..|...|..+++  +|++++|++|+.||.|++|++....    ....
T Consensus       202 ~~~d~~v~i~d~~~~~------------~~~~~~~h~~~i~~v~~--~p~~~~l~s~s~d~~i~~~~~~~~~----~~~~  263 (340)
T d1tbga_         202 GACDASAKLWDVREGM------------CRQTFTGHESDINAICF--FPNGNAFATGSDDATCRLFDLRADQ----ELMT  263 (340)
T ss_dssp             EETTTEEEEEETTTTE------------EEEEECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTE----EEEE
T ss_pred             eecCceEEEEECCCCc------------EEEEEeCCCCCeEEEEE--CCCCCEEEEEeCCCeEEEEeecccc----cccc
Confidence            9999999999998874            47888889988887766  4679999999999999999999874    3344


Q ss_pred             EeccccccceeeeEEccCCceeeC
Q psy10348        268 LSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       268 ~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      +....+...|.+++|+|+|++|++
T Consensus       264 ~~~~~~~~~i~~~~~s~~~~~l~~  287 (340)
T d1tbga_         264 YSHDNIICGITSVSFSKSGRLLLA  287 (340)
T ss_dssp             ECCTTCCSCEEEEEECSSSCEEEE
T ss_pred             cccccccCceEEEEECCCCCEEEE
Confidence            555567788999999999999874

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=1.2e-30  Score=203.13  Aligned_cols=207  Identities=12%  Similarity=0.132  Sum_probs=163.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEec--CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAG--SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|..+|.+++|++++.    ++++++  .++.+++|+.++++.+..+.+|...|.+++|+|.+..++++++.|+.+++||
T Consensus       113 ~~~~~v~~v~~s~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d  188 (325)
T d1pgua1         113 VLAGPISDISWDFEGR----RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ  188 (325)
T ss_dssp             CCSSCEEEEEECTTSS----EEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEE
T ss_pred             cccCcEEEEEECCCCC----ccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeeccccccccc
Confidence            3567899999999984    777665  4678999999999999999999999999999995445688899999999999


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ  164 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (291)
                      ....+....+.....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+.                    
T Consensus       189 ~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~--------------------  248 (325)
T d1pgua1         189 GPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ--------------------  248 (325)
T ss_dssp             TTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT--------------------
T ss_pred             ccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccc--------------------
Confidence            9988877776555778899999999997 6789999999999999999888665543200                    


Q ss_pred             cccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc--cEEEEEEEecCCCcEE
Q psy10348        165 FSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC--EIWFIRFSMDYWQKIL  241 (291)
Q Consensus       165 ~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l  241 (291)
                          ..+...+.++.|. +.+|++++.|+.|++||+++++.            +..+..+..  .+..+.+.+.+ +.+|
T Consensus       249 ----~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~-~~~l  311 (325)
T d1pgua1         249 ----EPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKC------------VQKWTLDKQQLGNQQVGVVATG-NGRI  311 (325)
T ss_dssp             ----BCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEE------------EEEEECCTTCGGGCEEEEEEEE-TTEE
T ss_pred             ----cccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCE------------EEEEEecCCcccCeEEEEEECC-CCEE
Confidence                0122334555555 77999999999999999988743            555554433  34455566554 4578


Q ss_pred             EEEcCCCcEEEEEc
Q psy10348        242 AVGNQSGRTYVWDL  255 (291)
Q Consensus       242 ~~~~~dg~i~vwd~  255 (291)
                      ++|+.||.|++||+
T Consensus       312 ~s~s~dg~i~vwdl  325 (325)
T d1pgua1         312 ISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEETTSCEEEEET
T ss_pred             EEEECCCEEEEEEC
Confidence            99999999999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=1.6e-31  Score=213.39  Aligned_cols=190  Identities=12%  Similarity=0.113  Sum_probs=129.5

Q ss_pred             cEEEEeecCCeEEEEECCCcc---------------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDI---------------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP  134 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~  134 (291)
                      .++++++.||.+++|++....               ..........+...+.+++|+|++ +|++|+.||+|++||++++
T Consensus       137 ~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~  215 (393)
T d1sq9a_         137 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL  215 (393)
T ss_dssp             EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT
T ss_pred             cEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccc
Confidence            456666777777777653211               011111123455668889999987 8889999999999999888


Q ss_pred             hhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC---eEEEecCCCCCccccc-
Q psy10348        135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN---CIICWKPGRLEDKELR-  208 (291)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~---~i~iwd~~~~~~~~~~-  208 (291)
                      +.+..+..                      ...+.+|..+|.+++|+  +++|++|+.|+   .|++||+.+++..... 
T Consensus       216 ~~~~~~~~----------------------~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~  273 (393)
T d1sq9a_         216 RPLYNFES----------------------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS  273 (393)
T ss_dssp             EEEEEEEC----------------------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred             cccccccc----------------------ccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeec
Confidence            76544331                      22334599999999998  78999999886   5999999887654221 


Q ss_pred             cCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccccccee----eeEEcc
Q psy10348        209 TNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR----QTTLSK  284 (291)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~----~~~~s~  284 (291)
                      ...........+.+|...|+.++|+  |++++|++|+.|++|++||+.++++    ...+.  +|...|.    .++|+|
T Consensus       274 ~~~~~~~~~~~~~gH~~~V~~l~fs--pd~~~l~S~s~D~~v~vWd~~~g~~----~~~l~--gH~~~v~~~~~~~~~~~  345 (393)
T d1sq9a_         274 VPTHSSQASLGEFAHSSWVMSLSFN--DSGETLCSAGWDGKLRFWDVKTKER----ITTLN--MHCDDIEIEEDILAVDE  345 (393)
T ss_dssp             BC--------CCBSBSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTTTEE----EEEEE--CCGGGCSSGGGCCCBCT
T ss_pred             cccccccceeeeecccCceeeeccC--CCCCeeEEECCCCEEEEEECCCCCE----EEEEC--CcCCcccCCccEEEECC
Confidence            1122223344556788888877665  6699999999999999999999853    34443  6777765    588999


Q ss_pred             CCceee
Q psy10348        285 NGNVLL  290 (291)
Q Consensus       285 ~g~~l~  290 (291)
                      +|..++
T Consensus       346 ~~~~~~  351 (393)
T d1sq9a_         346 HGDSLA  351 (393)
T ss_dssp             TSCBCS
T ss_pred             CCCEEE
Confidence            888765

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=1.3e-30  Score=200.52  Aligned_cols=225  Identities=16%  Similarity=0.149  Sum_probs=162.1

Q ss_pred             cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348         46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS  125 (291)
Q Consensus        46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  125 (291)
                      |+..+.+++|.++|++++|+| ++++|++|+.||+|++||+++++....+.  ..|...|.+++|+|+++ +++++.|+.
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~-dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~--~~h~~~v~~v~~~~~g~-~~~~~~d~~   77 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFP--DVHATMITGIKTTSKGD-LFTVSWDDH   77 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSS--CSCSSCEEEEEECTTSC-EEEEETTTE
T ss_pred             CccceEcCCCCCCcEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEc--CCCCCcEEEEEeeccce-eecccceee
Confidence            567788999999999999999 89999999999999999999999888763  57999999999999986 556677999


Q ss_pred             EEEEeccCchhhhhhc---------cccccCCCCccccccCccccCccc----ccccccCcceeEEEEc--CCEEEEecC
Q psy10348        126 LKLWDLTKPEIKDACA---------ESYTFNPARSTRPFDTQKEHFPQF----STRDIHRNYVDCVRWL--GDFVLSKSC  190 (291)
Q Consensus       126 i~v~d~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~--~~~l~~~~~  190 (291)
                      +++|+...........         ..+.+.+++......... ....+    .........+.+++|+  ++++++++.
T Consensus        78 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  156 (299)
T d1nr0a2          78 LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK-HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ  156 (299)
T ss_dssp             EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS-EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred             EEEeccCCccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence            9999987543221111         123344443322211100 00000    0011133457788887  679999999


Q ss_pred             CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec
Q psy10348        191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH  270 (291)
Q Consensus       191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  270 (291)
                      |+.|++||+++....           ......|...|..++  ++|++++|++++.||.|++||+.++....   .....
T Consensus       157 dg~i~~~d~~~~~~~-----------~~~~~~~~~~i~~~~--~~~~~~~l~~~~~d~~i~~~~~~~~~~~~---~~~~~  220 (299)
T d1nr0a2         157 DSKVHVYKLSGASVS-----------EVKTIVHPAEITSVA--FSNNGAFLVATDQSRKVIPYSVANNFELA---HTNSW  220 (299)
T ss_dssp             TSEEEEEEEETTEEE-----------EEEEEECSSCEEEEE--ECTTSSEEEEEETTSCEEEEEGGGTTEES---CCCCC
T ss_pred             ccccccccccccccc-----------ccccccccccccccc--ccccccccccccccccccccccccccccc---ccccc
Confidence            999999998765431           122334566676655  45779999999999999999998875322   22234


Q ss_pred             cccccceeeeEEccCCceeeC
Q psy10348        271 PRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       271 ~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .+|..+|++++|+|+|++|++
T Consensus       221 ~~h~~~v~~l~~s~~~~~l~s  241 (299)
T d1nr0a2         221 TFHTAKVACVSWSPDNVRLAT  241 (299)
T ss_dssp             CCCSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccceEE
Confidence            468889999999999999874

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.8e-30  Score=203.55  Aligned_cols=250  Identities=15%  Similarity=0.255  Sum_probs=150.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec--cceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG--HAINELKFHPQDFNLLLSVSKDHTLRLWN   85 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~dg~i~vwd   85 (291)
                      .|+++|++++|+|++     +|++|+.||.|++|+....+.......+.  .......+.+ ++.++++++.|+.|++||
T Consensus        51 ~H~~~V~~l~~s~~~-----~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~iw~  124 (355)
T d1nexb2          51 GHDGGVWALKYAHGG-----ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWK  124 (355)
T ss_dssp             CCSSCEEEEEEETTT-----EEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEET-TEEEEEEEETTSEEEEEE
T ss_pred             CCCCCEEEEEEcCCC-----EEEEEeccccccccccccccccccccccccccccccccccc-ccceeeeecCCCcEEEEE
Confidence            478999999999864     89999999999999999887766654333  3345566677 778888899999999998


Q ss_pred             CCCcceeeeecc--------------------ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh------hh
Q psy10348         86 IKTDICIAIFGG--------------------VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK------DA  139 (291)
Q Consensus        86 ~~~~~~~~~~~~--------------------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~------~~  139 (291)
                      +.++........                    ...|...+.  .+.+++++++++..|+.+++||+++++.+      ..
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~  202 (355)
T d1nexb2         125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD  202 (355)
T ss_dssp             CCC-----------CCCEEESCTTTCTTEEEEEECCSSCEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             ccCCceeccccccceeccceeccccccceeeeeeecccccc--ccccccceeeeecccceeeeeecccccceeeeecccc
Confidence            775432211100                    011111111  12233444555555555555554433210      00


Q ss_pred             hccccccCCCCccccccCcc--------ccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348        140 CAESYTFNPARSTRPFDTQK--------EHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                      ......+.+...........        ..........+|...|.++++++++|++++.||.|++||+++...       
T Consensus       203 ~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------  275 (355)
T d1nexb2         203 RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR-------  275 (355)
T ss_dssp             CEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCE-------
T ss_pred             ccccccccccceeeecccccceEEeeeccccccccccccccccccccccccceeeeeecccccccccccccce-------
Confidence            00111111211111100000        001122334569999999999999999999999999999987643       


Q ss_pred             CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC
Q psy10348        212 TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       212 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  286 (291)
                             .+..|...+..+.+ +.+++.++++|+ ||.|++||+++++.+..     ...+|.++|++++|+|+.
T Consensus       276 -------~~~~~~~~~~~~~~-~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~-----~~~~~~~~V~~v~~~~~~  336 (355)
T d1nexb2         276 -------KFSYHHTNLSAITT-FYVSDNILVSGS-ENQFNIYNLRSGKLVHA-----NILKDADQIWSVNFKGKT  336 (355)
T ss_dssp             -------EEEEECTTCCCCCE-EEECSSEEEEEE-TTEEEEEETTTCCBCCS-----CTTTTCSEEEEEEEETTE
T ss_pred             -------ecccccCCceEEEE-EcCCCCEEEEEe-CCEEEEEECCCCCEEEE-----EecCCCCCEEEEEEcCCe
Confidence                   22333333433332 224477777665 89999999999865321     123678899999999874

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=4.2e-30  Score=196.43  Aligned_cols=241  Identities=12%  Similarity=0.088  Sum_probs=158.2

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK   87 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~   87 (291)
                      .|.++|++++|+|        |++|+.||+|++||+.++     .++|...|.++++++ + ..+++++.|+++++|++.
T Consensus        11 gH~~~I~~l~~s~--------l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~-~-~~~~s~s~D~~v~~w~~~   75 (287)
T d1pgua2          11 GHNKGITALTVNP--------LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSK-A-QEYSSISWDDTLKVNGIT   75 (287)
T ss_dssp             CCSSCEEEEETTT--------TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCS-T-TCCEEEETTTEEEETTEE
T ss_pred             CCCCceEEEEECc--------EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecC-C-CeEEEEeecccccccccc
Confidence            5899999999964        899999999999998754     357999999999987 5 567999999999999875


Q ss_pred             CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc---cccCCCCccccccCcc-----
Q psy10348         88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES---YTFNPARSTRPFDTQK-----  159 (291)
Q Consensus        88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----  159 (291)
                      ..+          ....+.++.+++++..++++. ++.+.+|+..+++....+...   ..+.+.+.........     
T Consensus        76 ~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~  144 (287)
T d1pgua2          76 KHE----------FGSQPKVASANNDGFTAVLTN-DDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ  144 (287)
T ss_dssp             EEE----------CSSCEEEEEECSSSEEEEEET-TSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred             ccc----------cccceeeeeeccCCceEEEee-cccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceee
Confidence            321          112233444444443333322 333444444444433333210   0111111110000000     


Q ss_pred             -----ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        160 -----EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       160 -----~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                           ...........|...+++++|+  +.+|++|+.||.|++||+.+....           ...+..|...+..+++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~-----------~~~~~~h~~~v~~~~~  213 (287)
T d1pgua2         145 VFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK-----------TSRWAFRTSKINAISW  213 (287)
T ss_dssp             EEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----------ECCSCCCSSCEEEEEE
T ss_pred             eeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccc-----------cccccccccccceeee
Confidence                 0000111122377889999998  779999999999999999876432           3446677788887776


Q ss_pred             Eec--------CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        233 SMD--------YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       233 ~~~--------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++.        +++.+|++|+.|++|++||+.+...     ......+|.+.|++++|+|++.++.
T Consensus       214 ~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~-----~~~~~~~h~~~V~~v~~~~~~~l~s  274 (287)
T d1pgua2         214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-----IIKALNAHKDGVNNLLWETPSTLVS  274 (287)
T ss_dssp             CCCC------CCSCCEEEEEETTSCEEEEESSCTTC-----CEEETTSSTTCEEEEEEEETTEEEE
T ss_pred             cccccccccccCCCCeeEeecCCCeEEEEECCCCCe-----EEEEeCCCCCCeEEEEECCCCEEEE
Confidence            542        4578999999999999999987542     2223347899999999999987543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=3.7e-27  Score=187.94  Aligned_cols=208  Identities=13%  Similarity=0.120  Sum_probs=148.6

Q ss_pred             ecceeEEEEeeeccC-CCCCEEEEecCCCeEEEEccCCcc-----------ee----EEE---eeeccceeEEEEecCCC
Q psy10348          9 IEENFYTCAWSMDLE-SGRPLLAVAGSRAVIRIFSPAFHA-----------CV----RHF---YGHGHAINELKFHPQDF   69 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~-~~~~~l~~~~~dg~i~vw~~~~~~-----------~~----~~~---~~~~~~v~~~~~~~~~~   69 (291)
                      +...+..++|.++.. ..+.++++++.||.+++|++....           ..    ...   ..+...+.+++|+| ++
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg  196 (393)
T d1sq9a_         118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG  196 (393)
T ss_dssp             GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS
T ss_pred             CCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECC-CC
Confidence            345677888887653 234589999999999999974221           00    111   13445689999999 75


Q ss_pred             cEEEEeecCCeEEEEECCCcceeeeec---cccCCCCceEEEEEccCCCEEEEEecCCc---EEEEeccCchhhhhhccc
Q psy10348         70 NLLLSVSKDHTLRLWNIKTDICIAIFG---GVEGHRDEVLSADFDLLGTKIMSCGMDHS---LKLWDLTKPEIKDACAES  143 (291)
Q Consensus        70 ~~l~s~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~d~~---i~v~d~~~~~~~~~~~~~  143 (291)
                       +||+|+.||+|++||+.+++++..+.   .+.+|..+|.+++|+|+|++|++|+.|++   |++||+++++.+..+...
T Consensus       197 -~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~  275 (393)
T d1sq9a_         197 -LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP  275 (393)
T ss_dssp             -EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC
T ss_pred             -EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccc
Confidence             89999999999999999988776553   34679999999999999999999999875   899999998876655321


Q ss_pred             cccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348        144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN  221 (291)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  221 (291)
                      .               ..........+|...|++++|+  +++|++++.|++|++||+.+++.            +..+.
T Consensus       276 ~---------------~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~------------~~~l~  328 (393)
T d1sq9a_         276 T---------------HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER------------ITTLN  328 (393)
T ss_dssp             -----------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE------------EEEEE
T ss_pred             c---------------ccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE------------EEEEC
Confidence            1               1111223345799999999998  77999999999999999998844            67777


Q ss_pred             CCcccEEEE--EEEecCCCcEEEEEc
Q psy10348        222 FKDCEIWFI--RFSMDYWQKILAVGN  245 (291)
Q Consensus       222 ~~~~~i~~~--~~~~~~~~~~l~~~~  245 (291)
                      +|...|...  .++++|++..+++++
T Consensus       329 gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         329 MHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             CCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             CcCCcccCCccEEEECCCCCEEEEcc
Confidence            776655321  123445566655443

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-25  Score=175.19  Aligned_cols=184  Identities=23%  Similarity=0.465  Sum_probs=151.2

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      ..+++++.|+.|++||....+.+..+.+|...+..+.+   ++.++++|+.||.|++||++.++.+..+   ..|...+.
T Consensus       148 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~s~~~dg~i~~~d~~~~~~~~~~---~~~~~~v~  221 (342)
T d2ovrb2         148 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTL---TGHQSLTS  221 (342)
T ss_dssp             SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEE---CCCCSCEE
T ss_pred             ceeeeecCCCeEEEeecccceeeEEEcCcccccccccC---CCCEEEEEeCCCeEEEeecccceeeeEe---ccccccee
Confidence            48899999999999999999999999888776665544   5689999999999999999999998887   78999999


Q ss_pred             EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEE
Q psy10348        107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVL  186 (291)
Q Consensus       107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  186 (291)
                      ++.++  +++|++++.|+.|++||+...+....+.                         ....|...+.++.+++++++
T Consensus       222 ~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~  274 (342)
T d2ovrb2         222 GMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ-------------------------GPNKHQSAVTCLQFNKNFVI  274 (342)
T ss_dssp             EEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC-------------------------STTSCSSCEEEEEECSSEEE
T ss_pred             EEecC--CCEEEEEcCCCEEEEEeccccccccccc-------------------------ccceeeeceeecccCCCeeE
Confidence            88876  4699999999999999998876543332                         11237788899999999999


Q ss_pred             EecCCCeEEEecCCCCCccccccCCCceeeeeee-----cCCcccEEEEEEEecCCCcEEEEEcCCCc----EEEEEcCC
Q psy10348        187 SKSCENCIICWKPGRLEDKELRTNETNVTIINRL-----NFKDCEIWFIRFSMDYWQKILAVGNQSGR----TYVWDLDV  257 (291)
Q Consensus       187 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~----i~vwd~~~  257 (291)
                      +++.||+|++||+++++.            +..+     .++...|+.+++  +|++.+||+|+.||+    |++||+..
T Consensus       275 s~s~Dg~i~iwd~~tg~~------------i~~~~~~~~~~~~~~v~~v~~--s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         275 TSSDDGTVKLWDLKTGEF------------IRNLVTLESGGSGGVVWRIRA--SNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEETTSEEEEEETTTCCE------------EEEEEECTTGGGTCEEEEEEE--CSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEcCCCEEEEEECCCCCE------------EEEEecccCCCCCCCEEEEEE--CCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            999999999999998855            3333     235556666555  567999999999985    99999874

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.95  E-value=7.6e-27  Score=183.50  Aligned_cols=239  Identities=8%  Similarity=0.006  Sum_probs=169.6

Q ss_pred             eeeeecceeEEEEeeeccCCCCCEEEEecCC--CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348          5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSR--AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR   82 (291)
Q Consensus         5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~   82 (291)
                      ..+.|...|.+++|+||+.    +|++++.+  ..|++||.++++. ..+..|...|.+++|+| ++++|++++.++.++
T Consensus        37 ~~~~~~~~v~~~~~spDg~----~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~  110 (360)
T d1k32a3          37 LKVPEPLRIRYVRRGGDTK----VAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDR-NGKFAVVANDRFEIM  110 (360)
T ss_dssp             EECSCCSCEEEEEECSSSE----EEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECT-TSSEEEEEETTSEEE
T ss_pred             EEccCCCCEEEEEECCCCC----EEEEEEcCCCCEEEEEECCCCcE-EEeeCCCceEEeeeecc-cccccceeccccccc
Confidence            4457899999999999994    77776654  3799999987765 45677999999999999 999999999999999


Q ss_pred             EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe----------cCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348         83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG----------MDHSLKLWDLTKPEIKDACAESYTFNPARST  152 (291)
Q Consensus        83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~  152 (291)
                      +|++.+++....+   ..|...+.+++|+|+|++|+.+.          .++.+++||+.+++.....            
T Consensus       111 ~~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~------------  175 (360)
T d1k32a3         111 TVDLETGKPTVIE---RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT------------  175 (360)
T ss_dssp             EEETTTCCEEEEE---ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS------------
T ss_pred             cccccccceeeee---ecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeec------------
Confidence            9999999888877   68889999999999999998654          3456899999887644322            


Q ss_pred             ccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc--------CC-----------
Q psy10348        153 RPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT--------NE-----------  211 (291)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------~~-----------  211 (291)
                                       .+...+..+.|+  |++|++++.++.+.+||...........        ..           
T Consensus       176 -----------------~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  238 (360)
T d1k32a3         176 -----------------TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR  238 (360)
T ss_dssp             -----------------CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCG
T ss_pred             -----------------ccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCC
Confidence                             256667788887  7899999999999999875442210000        00           


Q ss_pred             ------------CceeeeeeecC----------CcccEEEEEEEe-cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEE
Q psy10348        212 ------------TNVTIINRLNF----------KDCEIWFIRFSM-DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQIL  268 (291)
Q Consensus       212 ------------~~~~~~~~~~~----------~~~~i~~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  268 (291)
                                  .....+..+..          +...+..+.+.. ++++.++++++.++.|++||+.+++.     .  
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~--  311 (360)
T d1k32a3         239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV-----T--  311 (360)
T ss_dssp             GGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE-----E--
T ss_pred             cCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE-----E--
Confidence                        00000111111          111111111111 12234567777889999999988642     1  


Q ss_pred             eccccccceeeeEEccCCceeeC
Q psy10348        269 SHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       269 ~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                         .|.+.|.+++|||||++|++
T Consensus       312 ---~~~~~v~~~~~SpDG~~l~~  331 (360)
T d1k32a3         312 ---EVKNNLTDLRLSADRKTVMV  331 (360)
T ss_dssp             ---EEEEEEEEEEECTTSCEEEE
T ss_pred             ---EecCCcCEEEECCCCCEEEE
Confidence               22347899999999999874

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.9e-24  Score=164.71  Aligned_cols=197  Identities=12%  Similarity=0.092  Sum_probs=148.5

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc----------------------------------eeEEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA----------------------------------CVRHF   52 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~----------------------------------~~~~~   52 (291)
                      ..|...|.+++++++.     .+++++.|+++++|+..+.+                                  .+..+
T Consensus        43 ~~h~~~V~~~~~~~~~-----~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (287)
T d1pgua2          43 QDHSNLIVSLDNSKAQ-----EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV  117 (287)
T ss_dssp             CCCCSCEEEEECCSTT-----CCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             CCCCCCEEEEEecCCC-----eEEEEeeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeec
Confidence            4577889999988765     67888889999999865321                                  11111


Q ss_pred             eeeccceeEEEEecCCCcEEEEeecCC-eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEec
Q psy10348         53 YGHGHAINELKFHPQDFNLLLSVSKDH-TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL  131 (291)
Q Consensus        53 ~~~~~~v~~~~~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~  131 (291)
                      .   ......++++ ++..+++++.++ .+++|++...+....+.  ..|...+.+++|+|++.+|++|+.||.|++||+
T Consensus       118 ~---~~~~~~~~~~-~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~  191 (287)
T d1pgua2         118 R---LNSPGSAVSL-SQNYVAVGLEEGNTIQVFKLSDLEVSFDLK--TPLRAKPSYISISPSETYIAAGDVMGKILLYDL  191 (287)
T ss_dssp             E---CSSCEEEEEE-CSSEEEEEETTTSCEEEEETTEEEEEEECS--SCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             c---ccceeeeeec-cCcceeeeccccceeeeeeccccceeeeee--eccCCceeEEEeccCccccccccccccccceee
Confidence            1   1122345667 667777777765 69999998666555442  468889999999999999999999999999999


Q ss_pred             cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc------------CCEEEEecCCCeEEEecC
Q psy10348        132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL------------GDFVLSKSCENCIICWKP  199 (291)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------~~~l~~~~~d~~i~iwd~  199 (291)
                      .+++.....                           ..+|..+|.+++|+            +.++++|+.|++|++||+
T Consensus       192 ~~~~~~~~~---------------------------~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~  244 (287)
T d1pgua2         192 QSREVKTSR---------------------------WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV  244 (287)
T ss_dssp             TTTEEEECC---------------------------SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred             ccccccccc---------------------------ccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEEC
Confidence            887643221                           13488889999885            358999999999999998


Q ss_pred             CCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        200 GRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                      +....           .+..+.+|...|..+.+.+  ++ .|++++.||.|++|++
T Consensus       245 ~~~~~-----------~~~~~~~h~~~V~~v~~~~--~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         245 KRPMK-----------IIKALNAHKDGVNNLLWET--PS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             SCTTC-----------CEEETTSSTTCEEEEEEEE--TT-EEEEEETTSCEEEEEE
T ss_pred             CCCCe-----------EEEEeCCCCCCeEEEEECC--CC-EEEEEECCCeEEEEEE
Confidence            76432           2677788999999887764  35 5888999999999996

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.9e-25  Score=173.54  Aligned_cols=129  Identities=17%  Similarity=0.094  Sum_probs=98.1

Q ss_pred             ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCc
Q psy10348         47 ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHS  125 (291)
Q Consensus        47 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~  125 (291)
                      +.++..++|++.|++|+|+| ++++||+|+.||+|+|||++.+.....+....+|..+|.+++|+|++ .+|++|+.||.
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp-~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~   80 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE   80 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred             CeEEcCCCCCCCEEEEEEeC-CCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc
Confidence            45666789999999999999 89999999999999999998765444332224799999999999875 57899999999


Q ss_pred             EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEE--cCCEEEEecCCCeEEEecCCCCC
Q psy10348        126 LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW--LGDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       126 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      |++|++...........                           .+........+  ....+++++.|+.+++||++...
T Consensus        81 v~~w~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~  133 (342)
T d1yfqa_          81 ILKVDLIGSPSFQALTN---------------------------NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG  133 (342)
T ss_dssp             EEEECSSSSSSEEECBS---------------------------CCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHT
T ss_pred             eeeeecccccccccccc---------------------------cccccccccccccccccccccccccccceeeccccc
Confidence            99999987764433221                           01111222222  37799999999999999986543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.93  E-value=6.1e-25  Score=172.51  Aligned_cols=221  Identities=12%  Similarity=-0.014  Sum_probs=162.3

Q ss_pred             EEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEECCCcce
Q psy10348         15 TCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWNIKTDIC   91 (291)
Q Consensus        15 ~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~   91 (291)
                      .-.||| |+    +++|+++ +|.|++||+++++.++ + .|...|.+++|+| ++++|++++.+.  .|++||.++++.
T Consensus         7 ~~~fSP~dG----~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~sp-Dg~~l~~~~~~~g~~v~v~d~~~~~~   78 (360)
T d1k32a3           7 AEDFSPLDG----DLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGG-DTKVAFIHGTREGDFLGIYDYRTGKA   78 (360)
T ss_dssp             EEEEEECGG----GCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECS-SSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred             cccccCCCC----CEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECC-CCCEEEEEEcCCCCEEEEEECCCCcE
Confidence            456999 88    4888876 5799999998887665 3 6899999999999 889888776553  799999998766


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH  171 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (291)
                      ...    ..|...|.+++|+|++++|++++.++.+++|++.+++....+.                            .|
T Consensus        79 ~~~----~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~  126 (360)
T d1k32a3          79 EKF----EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER----------------------------SR  126 (360)
T ss_dssp             EEC----CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----------------------------CS
T ss_pred             EEe----eCCCceEEeeeecccccccceeccccccccccccccceeeeee----------------------------cc
Confidence            543    5899999999999999999999999999999998887554332                            36


Q ss_pred             CcceeEEEEc--CCEEEE----------ecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        172 RNYVDCVRWL--GDFVLS----------KSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       172 ~~~v~~~~~~--~~~l~~----------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                      ...+.+++|+  |++|+.          +..++.+++||+.+.+.             .....+...+..  ..++|+|+
T Consensus       127 ~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~-------------~~~~~~~~~~~~--~~~spdg~  191 (360)
T d1k32a3         127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI-------------FAATTENSHDYA--PAFDADSK  191 (360)
T ss_dssp             SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE-------------EECSCSSSBEEE--EEECTTSC
T ss_pred             cccccchhhccceeeeeeeccccccceeeccccceeeeccccCce-------------eeeccccccccc--ccccCCCC
Confidence            6778888898  667764          44567899999987643             222333344443  45667899


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCc-ceeEEEeccccccceeeeEEccCCceee
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSS-IKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +|++++.++.+++|+........ ..........+...+..+.|++++..++
T Consensus       192 ~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~  243 (360)
T d1k32a3         192 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE  243 (360)
T ss_dssp             EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred             EEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCccc
Confidence            99999999999999987643110 0011112223445566677777776543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=3.4e-25  Score=178.30  Aligned_cols=258  Identities=12%  Similarity=0.033  Sum_probs=168.7

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceee--eeccccCCCCce
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIA--IFGGVEGHRDEV  105 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~i  105 (291)
                      ++++.+.||+|+|||+.+++.+..+..|. .+..++|+| ||++|++++.|++|++||+.+++...  .+....+|...+
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~  111 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE  111 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECC-CCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence            56778899999999999999999998764 589999999 99999999999999999999887543  332224667777


Q ss_pred             EEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccc------cccCCC-----------CccccccCcc--------
Q psy10348        106 LSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAES------YTFNPA-----------RSTRPFDTQK--------  159 (291)
Q Consensus       106 ~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~------~~~~~~-----------~~~~~~~~~~--------  159 (291)
                      .+++|+|+|++++++ ..++.+++||..++.........      ..+.+.           .....+....        
T Consensus       112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~  191 (426)
T d1hzua2         112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN  191 (426)
T ss_dssp             ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred             EeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence            888899999987555 57999999999988766544321      111111           1111110000        


Q ss_pred             --ccCcccccccccCcceeEEEEc--CCEEEE-ecCCCeEEEecCCCCCccccccC------------------------
Q psy10348        160 --EHFPQFSTRDIHRNYVDCVRWL--GDFVLS-KSCENCIICWKPGRLEDKELRTN------------------------  210 (291)
Q Consensus       160 --~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~------------------------  210 (291)
                        ...........+...+..+.|+  ++++++ ...+..+.+++..+.+.......                        
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (426)
T d1hzua2         192 YKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS  271 (426)
T ss_dssp             CSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEE
T ss_pred             eccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEec
Confidence              0000001112345556777786  554444 44566777887766543311000                        


Q ss_pred             ------------------CCceeeeeeecCCcccEEEEEEEecCCCcEEEE-------EcCCCcEEEEEcCCCCCCccee
Q psy10348        211 ------------------ETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV-------GNQSGRTYVWDLDVQDPSSIKF  265 (291)
Q Consensus       211 ------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~-------~~~dg~i~vwd~~~~~~~~~~~  265 (291)
                                        ....+....+.+|...+..++  ++||+++|++       ++.|++|+|||+.+++...+..
T Consensus       272 ~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~--~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~  349 (426)
T d1hzua2         272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK--THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVL  349 (426)
T ss_dssp             CTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEE--CCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEE
T ss_pred             cCCCceEEEeeccccccccccceEeEEEecCCCceeEEE--cCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEe
Confidence                              001133445666666666654  5577999995       5568899999999987654322


Q ss_pred             EEE---eccccccceeeeEEccCCcee
Q psy10348        266 QIL---SHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       266 ~~~---~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      ..-   ....+...|.+++|||||++|
T Consensus       350 ~~~~~~~~~~~~~rv~~~~fSpDGk~i  376 (426)
T d1hzua2         350 PIAEWADLGEGAKRVVQPEYNKRGDEV  376 (426)
T ss_dssp             CHHHHHCCCSSCCCEEEEEECSSSSEE
T ss_pred             ccchhcccCCCCccEEEEEECCCCCEE
Confidence            111   122456679999999999976

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.5e-24  Score=162.34  Aligned_cols=209  Identities=18%  Similarity=0.300  Sum_probs=149.6

Q ss_pred             EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEE
Q psy10348         50 RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW  129 (291)
Q Consensus        50 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~  129 (291)
                      .....|...|+|++  + ++++||||+.||+|+|||+++++++..+   .+|...|.+++|  ++++|++|+.|+.|++|
T Consensus         9 ~~~~~~~~~V~c~~--~-d~~~l~sgs~Dg~i~vWd~~~~~~~~~l---~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~   80 (293)
T d1p22a2           9 HCRSETSKGVYCLQ--Y-DDQKIVSGLRDNTIKIWDKNTLECKRIL---TGHTGSVLCLQY--DERVIITGSSDSTVRVW   80 (293)
T ss_dssp             ECCCSSCCCEEEEE--C-CSSEEEEEESSSCEEEEESSSCCEEEEE---CCCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred             eccCCCCCCEEEEE--E-cCCEEEEEeCCCeEEEEECCCCcEEEEE---ecCCCCEeeeec--ccceeeccccccccccc
Confidence            33446777888765  4 6789999999999999999999999998   799999999987  57899999999999999


Q ss_pred             eccCchhhhhhcccc----ccCC----------CCccccccCcc-ccCcccccccccCcceeEEEEcCCEEEEecCCCeE
Q psy10348        130 DLTKPEIKDACAESY----TFNP----------ARSTRPFDTQK-EHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCI  194 (291)
Q Consensus       130 d~~~~~~~~~~~~~~----~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i  194 (291)
                      ++..+..........    ...+          .+....+.... ...........|...+..+.+....+++++.|+.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i  160 (293)
T d1p22a2          81 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI  160 (293)
T ss_dssp             ESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEE
T ss_pred             ccccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCce
Confidence            998876554333210    0000          01111111111 11112333456888898899988999999999999


Q ss_pred             EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348        195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM  274 (291)
Q Consensus       195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~  274 (291)
                      ++||.++.+.            +..+.++...+..+  .++  +.++++++.||.|++||+.+.+.      .....++.
T Consensus       161 ~~~d~~~~~~------------~~~~~~~~~~v~~~--~~~--~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~  218 (293)
T d1p22a2         161 KVWNTSTCEF------------VRTLNGHKRGIACL--QYR--DRLVVSGSSDNTIRLWDIECGAC------LRVLEGHE  218 (293)
T ss_dssp             EEEETTTCCE------------EEEEECCSSCEEEE--EEE--TTEEEEEETTSCEEEEETTTCCE------EEEECCCS
T ss_pred             eeecCCCCcE------------EEEEcccccccccc--cCC--CCeEEEecCCCEEEEEeccccee------eeeecccc
Confidence            9999988754            67777777666544  334  78999999999999999998752      22333555


Q ss_pred             cceeeeEEccCCceee
Q psy10348        275 SAVRQTTLSKNGNVLL  290 (291)
Q Consensus       275 ~~v~~~~~s~~g~~l~  290 (291)
                      ..+..  +++++.+|+
T Consensus       219 ~~v~~--~~~~~~~l~  232 (293)
T d1p22a2         219 ELVRC--IRFDNKRIV  232 (293)
T ss_dssp             SCEEE--EECCSSEEE
T ss_pred             eeeee--ccccceEEE
Confidence            56654  556666665

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=1.8e-22  Score=162.32  Aligned_cols=263  Identities=9%  Similarity=-0.026  Sum_probs=166.0

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE--E---eeeccceeEEEEecCCCcEEE-EeecCC
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH--F---YGHGHAINELKFHPQDFNLLL-SVSKDH   79 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~--~---~~~~~~v~~~~~~~~~~~~l~-s~~~dg   79 (291)
                      .+.....+..++||||+    +++++++.||+|++||+.+++....  +   .+|...+.+++|+| ++++++ ++..++
T Consensus        57 ~l~~g~~~~~vafSPDG----k~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~sp-DG~~l~v~~~~~~  131 (426)
T d1hzua2          57 VIDTGYAVHISRMSASG----RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY-EDRYTIAGAYWPP  131 (426)
T ss_dssp             EEECCSSEEEEEECTTS----CEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTC-TTTEEEEEEEESS
T ss_pred             EEeCCCCeeEEEECCCC----CEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecC-CCCEEEEeecCCC
Confidence            34455678999999999    5999999999999999998875433  2   26777788889999 788764 456889


Q ss_pred             eEEEEECCCcceeeeecc----------------------------------------------------ccCCCCceEE
Q psy10348         80 TLRLWNIKTDICIAIFGG----------------------------------------------------VEGHRDEVLS  107 (291)
Q Consensus        80 ~i~vwd~~~~~~~~~~~~----------------------------------------------------~~~~~~~i~~  107 (291)
                      .+++||..++.....+..                                                    ...+...+..
T Consensus       132 ~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  211 (426)
T d1hzua2         132 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLAD  211 (426)
T ss_dssp             EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEE
T ss_pred             eEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEe
Confidence            999999887654432210                                                    0123344567


Q ss_pred             EEEccCCCEEEEEec-CCcEEEEeccCchhhhhhcccccc---------------------CCCCccccccCcc-----c
Q psy10348        108 ADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTF---------------------NPARSTRPFDTQK-----E  160 (291)
Q Consensus       108 ~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~-----~  160 (291)
                      +.|+|++++++++.. +..+.+++..+++...........                     .+++....+....     .
T Consensus       212 ~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~  291 (426)
T d1hzua2         212 GGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY  291 (426)
T ss_dssp             EEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTT
T ss_pred             eeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccc
Confidence            888889887777664 566888888887766544321111                     1111111111110     0


Q ss_pred             cCcccccccccCcceeEEEEc--CCEEE-------EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348        161 HFPQFSTRDIHRNYVDCVRWL--GDFVL-------SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIR  231 (291)
Q Consensus       161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~-------~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  231 (291)
                      .......+.+|...+..++|+  +.+|+       +++.|++|++||+.+++.......   .........+...  ++.
T Consensus       292 ~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~---~~~~~~~~~~~~r--v~~  366 (426)
T d1hzua2         292 AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP---IAEWADLGEGAKR--VVQ  366 (426)
T ss_dssp             BTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC---HHHHHCCCSSCCC--EEE
T ss_pred             cceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEec---cchhcccCCCCcc--EEE
Confidence            112334567889999999998  66887       355688999999988765310000   0000011122333  445


Q ss_pred             EEecCCCcEEEEE-----cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        232 FSMDYWQKILAVG-----NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       232 ~~~~~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.++|||+++++.     +.+|.|+|||..+.+    ....+...    +    .++|+|+|-+
T Consensus       367 ~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k----~~~~i~~~----~----~~tp~Gk~~~  418 (426)
T d1hzua2         367 PEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK----LKAVVKDP----R----LITPTGKFNV  418 (426)
T ss_dssp             EEECSSSSEEEEEECCCTTSCCEEEEEETTTTE----EEEEECCT----T----CCSEEEEEEH
T ss_pred             EEECCCCCEEEEEEecCCCCCCeEEEEECCCCe----EEEEECCC----C----ccCCCceEeE
Confidence            5667889977542     468899999999984    23334321    1    4568887753

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.90  E-value=1.9e-20  Score=143.04  Aligned_cols=223  Identities=9%  Similarity=0.032  Sum_probs=160.4

Q ss_pred             eecceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348          8 LIEENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI   86 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~   86 (291)
                      ........++|+|++.    +| ++++.++.|++||+.+++.+..+..+.. +..++|+++....++++..++.+.+|+.
T Consensus        29 ~~g~~p~~va~spdG~----~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (301)
T d1l0qa2          29 PVGSNPMGAVISPDGT----KVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDT  103 (301)
T ss_dssp             ECSSSEEEEEECTTSS----EEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             ECCCCceEEEEeCCCC----EEEEEECCCCEEEEEECCCCceeeeeecccc-ccccccccccccccccccccceeeeccc
Confidence            3456678999999985    55 5777899999999999999999887654 6889999944345566677889999999


Q ss_pred             CCcceeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .+++....+    .+.....++.|+|++..++. +..++.+.+|+..+......+.                        
T Consensus       104 ~~~~~~~~~----~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  155 (301)
T d1l0qa2         104 TSNTVAGTV----KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS------------------------  155 (301)
T ss_dssp             TTTEEEEEE----ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE------------------------
T ss_pred             ccceeeeec----cccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc------------------------
Confidence            999888877    45567788999999997754 5558889999999887665443                        


Q ss_pred             ccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA  242 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  242 (291)
                           +...+..+.++  +..+++++ .++.+.+|+......            ......+.. ..  ...+++++..++
T Consensus       156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-~~--~~~~~~~g~~~~  215 (301)
T d1l0qa2         156 -----VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV------------IDTVKVEAA-PS--GIAVNPEGTKAY  215 (301)
T ss_dssp             -----CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE------------EEEEECSSE-EE--EEEECTTSSEEE
T ss_pred             -----cCCCceEEEeeccccceeeecccccccccccccceee------------eecccccCC-cc--eeeccccccccc
Confidence                 33446677787  45555554 457787888766532            333333332 22  345567788877


Q ss_pred             EEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        243 VGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       243 ~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      +++   .++.|++||+.+++.    ...+.   +...+.+++|+|||++|+
T Consensus       216 v~~~~~~~~~v~v~D~~t~~~----~~~~~---~~~~~~~va~spdg~~l~  259 (301)
T d1l0qa2         216 VTNVDKYFNTVSMIDTGTNKI----TARIP---VGPDPAGIAVTPDGKKVY  259 (301)
T ss_dssp             EEEECSSCCEEEEEETTTTEE----EEEEE---CCSSEEEEEECTTSSEEE
T ss_pred             cccccceeeeeeeeecCCCeE----EEEEc---CCCCEEEEEEeCCCCEEE
Confidence            654   346899999998742    22232   234689999999999873

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=5.6e-21  Score=153.41  Aligned_cols=200  Identities=9%  Similarity=-0.042  Sum_probs=144.2

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce--eeeeccccCCCCce
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC--IAIFGGVEGHRDEV  105 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~i  105 (291)
                      ++++.+.+|+|.|||.++++++..+..+ ..+..++|+| ||+++++++.|+.|++||+.+++.  ...+....+|.+.+
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSp-DG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~  111 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE  111 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECC-CCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeE
Confidence            4688999999999999999999999876 4689999999 999999999999999999987763  33333224566677


Q ss_pred             EEEEEccCCCEE-EEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348        106 LSADFDLLGTKI-MSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G  182 (291)
Q Consensus       106 ~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~  182 (291)
                      .+..|+|||++| ++++.++.|++||..+++.+..+..........                 ...+......+.++  +
T Consensus       112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~v~~s~dg  174 (432)
T d1qksa2         112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ-----------------EYHPEPRVAAILASHYR  174 (432)
T ss_dssp             ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTC-----------------CEESCCCEEEEEECSSS
T ss_pred             EecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccce-----------------eccCCCceeEEEECCCC
Confidence            777889999976 677789999999999998776554211110000                 01134455667776  4


Q ss_pred             C-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCC
Q psy10348        183 D-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQD  259 (291)
Q Consensus       183 ~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~  259 (291)
                      . ++++...++.|.+||....+..          .+..+.... ...  .+.++|+|+++++++ .++.+.++|..+.+
T Consensus       175 ~~~~vs~~~~~~i~~~d~~~~~~~----------~~~~i~~g~-~~~--~~~~spdg~~~~va~~~~~~v~v~d~~~~~  240 (432)
T d1qksa2         175 PEFIVNVKETGKILLVDYTDLNNL----------KTTEISAER-FLH--DGGLDGSHRYFITAANARNKLVVIDTKEGK  240 (432)
T ss_dssp             SEEEEEETTTTEEEEEETTCSSEE----------EEEEEECCS-SEE--EEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred             CEEEEEEccCCeEEEEEccCCCcc----------eEEEEcccC-ccc--cceECCCCCEEEEeccccceEEEeecccce
Confidence            4 5567778899999998776541          233333222 223  456678899887776 45678899988754

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=1.3e-20  Score=146.15  Aligned_cols=222  Identities=10%  Similarity=0.067  Sum_probs=145.3

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeee--ccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceeeeeccc--cCC
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGH--GHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIAIFGGV--EGH  101 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~  101 (291)
                      .++++++.|++|+|||+++++.+..+..+  ...+.+++|+| |++++ ++++.++.|.+||+.+++.+..+...  ..+
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~sp-Dg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~   80 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECC-CCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccc
Confidence            48999999999999999999999988753  45678999999 88876 56678999999999999988776311  111


Q ss_pred             CCceEEEEEccCCCEEEEEec------------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348        102 RDEVLSADFDLLGTKIMSCGM------------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~~------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ...+..++|+|++++++++..            +..+.+||..+++....+.                            
T Consensus        81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----------------------------  132 (337)
T d1pbyb_          81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE----------------------------  132 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE----------------------------
T ss_pred             ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc----------------------------
Confidence            234557999999999988763            5678889988877655443                            


Q ss_pred             ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC------------------------------------
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE------------------------------------  211 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------------------------------  211 (291)
                       +...+..++|+  +.++++++.+  +.+||..+.+........                                    
T Consensus       133 -~~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (337)
T d1pbyb_         133 -APRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI  209 (337)
T ss_dssp             -CCSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTS
T ss_pred             -ccCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeecc
Confidence             23334555665  5555555433  445555443221000000                                    


Q ss_pred             ------Cceee------------eeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc
Q psy10348        212 ------TNVTI------------INRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC  273 (291)
Q Consensus       212 ------~~~~~------------~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  273 (291)
                            .....            ...+..+....  ..+..+|++.+++++  ++.|++||+.+++.    ...+.   +
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~----~~~~~---~  278 (337)
T d1pbyb_         210 DPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY--FSTAVNPAKTRAFGA--YNVLESFDLEKNAS----IKRVP---L  278 (337)
T ss_dssp             CTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCE--EEEEECTTSSEEEEE--ESEEEEEETTTTEE----EEEEE---C
T ss_pred             ceeeecccCccEEEEEcCCCcEEEEEecCCCcce--EEEEecccceEEEEc--cccEEEEECCCCcE----EEEEc---C
Confidence                  00000            11111122222  234455678887766  57899999999843    23332   3


Q ss_pred             ccceeeeEEccCCceeeC
Q psy10348        274 MSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       274 ~~~v~~~~~s~~g~~l~s  291 (291)
                      ...+.+++|+|||++|++
T Consensus       279 ~~~~~~~~~s~dG~~l~v  296 (337)
T d1pbyb_         279 PHSYYSVNVSTDGSTVWL  296 (337)
T ss_dssp             SSCCCEEEECTTSCEEEE
T ss_pred             CCCEEEEEECCCCCEEEE
Confidence            457899999999998863

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.87  E-value=2.3e-21  Score=155.68  Aligned_cols=124  Identities=8%  Similarity=-0.140  Sum_probs=96.1

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee--EEE---eeeccceeEEEEecCCCcEE-EEeecCCeE
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHF---YGHGHAINELKFHPQDFNLL-LSVSKDHTL   81 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~---~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i   81 (291)
                      .....+..++||||+    +++++++.||.|++||+.+++..  ..+   .+|.+.+.+..|+| |+++| ++++.++.|
T Consensus        59 ~~g~~~~~v~fSpDG----~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~Sp-DG~~l~vs~~~~~~v  133 (432)
T d1qksa2          59 DTGYAVHISRLSASG----RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGW-EDKYAIAGAYWPPQY  133 (432)
T ss_dssp             ECSSCEEEEEECTTS----CEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTC-TTTEEEEEEEETTEE
T ss_pred             eCCCCeeEEEECCCC----CEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCC-CCCEEEEEcCCCCeE
Confidence            344679999999999    59999999999999999887643  333   35667777888899 78765 778889999


Q ss_pred             EEEECCCcceeeeecc--------ccCCCCceEEEEEccCCCEEE-EEecCCcEEEEeccCchh
Q psy10348         82 RLWNIKTDICIAIFGG--------VEGHRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~  136 (291)
                      ++||..+++.+..+..        ...+......+.++|++..++ +...++.|.+||..+.+.
T Consensus       134 ~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~  197 (432)
T d1qksa2         134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN  197 (432)
T ss_dssp             EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE
T ss_pred             EEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCc
Confidence            9999999988776521        012445677889999998764 556689999999887654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.86  E-value=6.9e-20  Score=141.96  Aligned_cols=223  Identities=9%  Similarity=0.024  Sum_probs=150.2

Q ss_pred             cceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccCCcceeEEEeeec-----cceeEEEEecCCCcEEEEee-------
Q psy10348         10 EENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPAFHACVRHFYGHG-----HAINELKFHPQDFNLLLSVS-------   76 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~s~~-------   76 (291)
                      ...+.+++|+||+.    ++ ++++.++.|.+||+.+++.+..+..+.     ..+..++|+| ++++++++.       
T Consensus        33 ~~~~~~i~~spDg~----~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~~~~~~~  107 (337)
T d1pbyb_          33 GPTPMVPMVAPGGR----IAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLEL  107 (337)
T ss_dssp             TTCCCCEEECTTSS----EEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECS
T ss_pred             CCCccEEEECCCCC----EEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcC-CCcEEEEeecCCccee
Confidence            35578999999984    65 667789999999999999988886543     4466899999 888887775       


Q ss_pred             -----cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----cccc
Q psy10348         77 -----KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----SYTF  146 (291)
Q Consensus        77 -----~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~  146 (291)
                           .+..+.+||..+++....+    .+...+..++|+|+|+++++++.  .+.+||..+++....+..     ...+
T Consensus       108 ~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~  181 (337)
T d1pbyb_         108 THFEVQPTRVALYDAETLSRRKAF----EAPRQITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWEAETYA  181 (337)
T ss_dssp             SCEEECCCEEEEEETTTTEEEEEE----ECCSSCCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTTTTTBC
T ss_pred             eeccccccceeeccccCCeEEEec----cccCCceEEEEcCCCCEEEEEcC--CcceeeeecCcEEEEeecCCcccccee
Confidence                 4578999999999888877    34566888999999999999864  478899988776554432     1112


Q ss_pred             CCCCccccccCccc--------------c-------Ccccc------------cccccCcceeEEEEc--CCEEEEecCC
Q psy10348        147 NPARSTRPFDTQKE--------------H-------FPQFS------------TRDIHRNYVDCVRWL--GDFVLSKSCE  191 (291)
Q Consensus       147 ~~~~~~~~~~~~~~--------------~-------~~~~~------------~~~~~~~~v~~~~~~--~~~l~~~~~d  191 (291)
                      .+............              .       ...+.            ....+...+..+.++  +.+++.+  +
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  259 (337)
T d1pbyb_         182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--Y  259 (337)
T ss_dssp             CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--E
T ss_pred             cCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--c
Confidence            22211110000000              0       00000            011233344455555  3344433  6


Q ss_pred             CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        192 NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       192 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      +.|++||+.+.+.            +..+.... .+..  ++++|||++|++++.||.|++||..+.+.
T Consensus       260 ~~i~v~d~~~~~~------------~~~~~~~~-~~~~--~~~s~dG~~l~v~~~~~~i~v~D~~t~~~  313 (337)
T d1pbyb_         260 NVLESFDLEKNAS------------IKRVPLPH-SYYS--VNVSTDGSTVWLGGALGDLAAYDAETLEK  313 (337)
T ss_dssp             SEEEEEETTTTEE------------EEEEECSS-CCCE--EEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred             ccEEEEECCCCcE------------EEEEcCCC-CEEE--EEECCCCCEEEEEeCCCcEEEEECCCCcE
Confidence            8999999998754            45444332 3333  55668899999999999999999999864

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=8.3e-20  Score=142.02  Aligned_cols=249  Identities=8%  Similarity=-0.066  Sum_probs=153.2

Q ss_pred             EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceeee
Q psy10348         17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                      +|++++    ++|++++.++.|.+||+++++++.+++ .|...+.+++|+| |++++ +++..++.|.+||+.+++.+..
T Consensus         3 a~~~~~----~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~sp-DG~~l~v~~~~~~~v~~~d~~t~~~~~~   77 (346)
T d1jmxb_           3 ALKAGH----EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFH   77 (346)
T ss_dssp             CCCTTC----EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cCCCCC----cEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECC-CCCEEEEEECCCCcEEEEeCccCeeeee
Confidence            566666    699999999999999999999999887 4566788999999 87776 5566789999999999988876


Q ss_pred             ecccc---CCCCceEEEEEccCCCEEEEEe------------cCCcEEEEeccCchhhhhhccc--------cccCCCCc
Q psy10348         95 FGGVE---GHRDEVLSADFDLLGTKIMSCG------------MDHSLKLWDLTKPEIKDACAES--------YTFNPARS  151 (291)
Q Consensus        95 ~~~~~---~~~~~i~~~~~~~~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~~~~--------~~~~~~~~  151 (291)
                      +....   .+...+..++|+|+|+++++++            .++.+.+||..+++....+...        ....+++.
T Consensus        78 ~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (346)
T d1jmxb_          78 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS  157 (346)
T ss_dssp             EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred             ecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCE
Confidence            63111   1123456799999999888775            4778999999887766544321        11111111


Q ss_pred             cccc-------cCccccC---------c---ccc-------cccccCcceeEEEE----c--CCEEEEecCCCeEEEecC
Q psy10348        152 TRPF-------DTQKEHF---------P---QFS-------TRDIHRNYVDCVRW----L--GDFVLSKSCENCIICWKP  199 (291)
Q Consensus       152 ~~~~-------~~~~~~~---------~---~~~-------~~~~~~~~v~~~~~----~--~~~l~~~~~d~~i~iwd~  199 (291)
                      ....       .......         +   .+.       ........+.....    .  ...+.++..+..+.+||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
T d1jmxb_         158 LYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL  237 (346)
T ss_dssp             EEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred             EEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEEC
Confidence            1000       0000000         0   000       00000111111111    0  224455556777888888


Q ss_pred             CCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceee
Q psy10348        200 GRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQ  279 (291)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~  279 (291)
                      .+....           ......+...+...  ..++++.+++.+.. +.|++||+.+++.    ...+.   +...+.+
T Consensus       238 ~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~v~v~d~~~~~~----~~~~~---~~~~~~~  296 (346)
T d1jmxb_         238 KTGKTH-----------TQEFADLTELYFTG--LRSPKDPNQIYGVL-NRLAKYDLKQRKL----IKAAN---LDHTYYC  296 (346)
T ss_dssp             TTCCEE-----------EEEEEECSSCEEEE--EECSSCTTEEEEEE-SEEEEEETTTTEE----EEEEE---CSSCCCE
T ss_pred             CCCceE-----------EEEeecccceeEEE--EEeCCCCEEEEecC-CeEEEEECCCCcE----EEEEc---CCCCEEE
Confidence            776532           23333344444443  44466777777664 5799999998842    23332   2347899


Q ss_pred             eEEccCCceeeC
Q psy10348        280 TTLSKNGNVLLC  291 (291)
Q Consensus       280 ~~~s~~g~~l~s  291 (291)
                      ++|||||++|++
T Consensus       297 va~s~DG~~l~v  308 (346)
T d1jmxb_         297 VAFDKKGDKLYL  308 (346)
T ss_dssp             EEECSSSSCEEE
T ss_pred             EEEcCCCCEEEE
Confidence            999999999863

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2e-19  Score=139.28  Aligned_cols=254  Identities=9%  Similarity=0.064  Sum_probs=147.0

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEE--eeeccceeEEEEecCCCcEEEEe-ecCCeEEEEECCCcceeeeeccccCCCCc
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHF--YGHGHAINELKFHPQDFNLLLSV-SKDHTLRLWNIKTDICIAIFGGVEGHRDE  104 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~  104 (291)
                      .+++++.|++|++|++++...+..+  ..|.+.+..|+|+| |+++|+++ ..|+.|++|++........+.....+...
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~   84 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS   84 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCC
Confidence            5678889999999998765433333  25788999999999 88888555 45899999999866443332111234556


Q ss_pred             eEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhc--------cccccCCCCccccccCccccCc-cccc-------
Q psy10348        105 VLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACA--------ESYTFNPARSTRPFDTQKEHFP-QFST-------  167 (291)
Q Consensus       105 i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~-------  167 (291)
                      +..++|+|+|++|++++. ++.+.+|+...........        ....+.|++............. .+..       
T Consensus        85 p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~  164 (333)
T d1ri6a_          85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV  164 (333)
T ss_dssp             CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred             ceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcce
Confidence            778999999999998875 7789999887655433222        1233444443322221111100 0000       


Q ss_pred             -------ccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeec-CCcccEEEEEEEecC
Q psy10348        168 -------RDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-FKDCEIWFIRFSMDY  236 (291)
Q Consensus       168 -------~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~  236 (291)
                             ..........++|+  +.++ .+....+...+|+...........     ..+.... ............+++
T Consensus       165 ~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~  239 (333)
T d1ri6a_         165 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV-----QTLDMMPENFSDTRWAADIHITP  239 (333)
T ss_dssp             EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE-----EEEECSCTTCCSCCCEEEEEECT
T ss_pred             eeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeee-----eeeeeeecCCCccccceeEEEec
Confidence                   00112233566676  3333 344455666666654332210000     0011111 111112233455667


Q ss_pred             CCcEEEEE-cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        237 WQKILAVG-NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       237 ~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++++++.. ..++.+.+|++.......   ...........+.+++|+|||++|+
T Consensus       240 d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~a~spDGk~l~  291 (333)
T d1ri6a_         240 DGRHLYACDRTASLITVFSVSEDGSVL---SKEGFQPTETQPRGFNVDHSGKYLI  291 (333)
T ss_dssp             TSSEEEEEETTTTEEEEEEECTTSCCE---EEEEEEECSSSCCCEEECTTSSEEE
T ss_pred             ccCceeeecccCCeEEEEEEcCCCCEE---EEEEEeCCCCCeeEEEEeCCCCEEE
Confidence            78876554 577899999998765432   2222223345688999999999876

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.84  E-value=8.3e-18  Score=128.11  Aligned_cols=206  Identities=9%  Similarity=0.019  Sum_probs=149.8

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL  106 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~  106 (291)
                      .+++++.|++|.+||+++++.++.+... ..+..++|+| ++++| ++++.++.|++||+.+++.+..+   ..+ ..+.
T Consensus         4 ~yV~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~sp-dG~~l~v~~~~~~~i~v~d~~t~~~~~~~---~~~-~~~~   77 (301)
T d1l0qa2           4 AYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATV---PAG-SSPQ   77 (301)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECS-SSEE
T ss_pred             EEEEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeC-CCCEEEEEECCCCEEEEEECCCCceeeee---ecc-cccc
Confidence            3456778999999999999999988743 5578999999 88766 56678899999999999998887   444 3568


Q ss_pred             EEEEccCCCEEEE-EecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CC
Q psy10348        107 SADFDLLGTKIMS-CGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD  183 (291)
Q Consensus       107 ~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~  183 (291)
                      .+.|++++..+++ +..++.+.+|+..+++....+.                             +.....++.|+  +.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~dg~  128 (301)
T d1l0qa2          78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-----------------------------TGKSPLGLALSPDGK  128 (301)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------------------------CSSSEEEEEECTTSS
T ss_pred             ccccccccccccccccccceeeecccccceeeeecc-----------------------------ccccceEEEeecCCC
Confidence            8999999986655 4557889999999887655443                             34456677886  44


Q ss_pred             -EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC-CcEEEEEcCCCCCC
Q psy10348        184 -FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS-GRTYVWDLDVQDPS  261 (291)
Q Consensus       184 -~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~  261 (291)
                       +++++..++.+.+|+..+...            +..+..+.. ...  +.++|++..+++++.+ +.+.+|+....+  
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  191 (301)
T d1l0qa2         129 KLYVTNNGDKTVSVINTVTKAV------------INTVSVGRS-PKG--IAVTPDGTKVYVANFDSMSISVIDTVTNS--  191 (301)
T ss_dssp             EEEEEETTTTEEEEEETTTTEE------------EEEEECCSS-EEE--EEECTTSSEEEEEETTTTEEEEEETTTTE--
T ss_pred             eeeeeeccccceeeeeccccce------------eeecccCCC-ceE--EEeeccccceeeeccccccccccccccee--
Confidence             456677789999999988743            444444433 233  4456778888777755 567777776652  


Q ss_pred             cceeEEEeccccccceeeeEEccCCceee
Q psy10348        262 SIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                        ......   ....+..++|+++|+.++
T Consensus       192 --~~~~~~---~~~~~~~~~~~~~g~~~~  215 (301)
T d1l0qa2         192 --VIDTVK---VEAAPSGIAVNPEGTKAY  215 (301)
T ss_dssp             --EEEEEE---CSSEEEEEEECTTSSEEE
T ss_pred             --eeeccc---ccCCcceeeccccccccc
Confidence              222222   234677899999998764

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.78  E-value=3.6e-18  Score=133.41  Aligned_cols=261  Identities=8%  Similarity=-0.060  Sum_probs=156.0

Q ss_pred             eeEEEEeeeccCCCCCEEEEe-----cCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEe----------e
Q psy10348         12 NFYTCAWSMDLESGRPLLAVA-----GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV----------S   76 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~-----~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~----------~   76 (291)
                      ++.-.+.+|++    +.+++.     ..++.|.+||..+++.+.++..+..  ..++|+| |+++|++.          .
T Consensus         3 p~~~~a~spdg----~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~Sp-Dg~~l~v~~~~~~~~~~g~   75 (355)
T d2bbkh_           3 PRILEAPAPDA----RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVVAD-DGSFIAHASTVFSRIARGE   75 (355)
T ss_dssp             CCBCCCCCCCT----TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEECT-TSSCEEEEEEEEEETTEEE
T ss_pred             CcEeEeeCCCC----CEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEEcC-CCCEEEEEeCCCccccccC
Confidence            33444567777    466654     2456799999999999998876544  4799999 88887764          3


Q ss_pred             cCCeEEEEECCCcceeeeeccccCC----CCceEEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhcc--------
Q psy10348         77 KDHTLRLWNIKTDICIAIFGGVEGH----RDEVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAE--------  142 (291)
Q Consensus        77 ~dg~i~vwd~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~--------  142 (291)
                      .|+.|++||+.+++.+..+.....+    ......++|+|++++++.+.  .+..+.+|+..+++....+..        
T Consensus        76 ~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (355)
T d2bbkh_          76 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFP  155 (355)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEee
Confidence            4789999999999887766321111    22335688999999887765  467899999998887655432        


Q ss_pred             -----ccccCCCCccccccCccccCccc----ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348        143 -----SYTFNPARSTRPFDTQKEHFPQF----STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE  211 (291)
Q Consensus       143 -----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  211 (291)
                           .+.+.+++....+..........    .....+...+....+.  +..++.++.++.+.+|++.......+....
T Consensus       156 ~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  235 (355)
T d2bbkh_         156 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE  235 (355)
T ss_dssp             EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE
T ss_pred             cCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccC
Confidence                 12233333322221111110000    0011233344455555  567888899999999999877543211110


Q ss_pred             CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----------CcEEEEEcCCCCCCcceeEEEeccccccceeeeE
Q psy10348        212 TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----------GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT  281 (291)
Q Consensus       212 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~  281 (291)
                      ..................  +..++++..++....+          ..|.+||..+++.+    ..+.   +...+.+++
T Consensus       236 ~~~~~~~~~~~~p~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~----~~~~---~~~~~~~~a  306 (355)
T d2bbkh_         236 ALTEAERADGWRPGGWQQ--VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL----AKFE---MGHEIDSIN  306 (355)
T ss_dssp             SSCHHHHHTTEEECSSSC--EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEE---EEEEECEEE
T ss_pred             CcccceEeeeeeccceEE--EEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEE----EEec---CCCCEEEEE
Confidence            000000000000011112  3445668887776543          36999999998532    2232   234688999


Q ss_pred             EccCCce
Q psy10348        282 LSKNGNV  288 (291)
Q Consensus       282 ~s~~g~~  288 (291)
                      |+|||+.
T Consensus       307 ~spDG~~  313 (355)
T d2bbkh_         307 VSQDEKP  313 (355)
T ss_dssp             ECCSSSC
T ss_pred             EcCCCCe
Confidence            9999984

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.78  E-value=1.7e-16  Score=124.72  Aligned_cols=265  Identities=7%  Similarity=-0.099  Sum_probs=154.0

Q ss_pred             eecceeEEEEeeeccCCCCCEEEEe-----cCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee------
Q psy10348          8 LIEENFYTCAWSMDLESGRPLLAVA-----GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS------   76 (291)
Q Consensus         8 ~~~~~i~~~~~s~~~~~~~~~l~~~-----~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~------   76 (291)
                      .+..++.+++++|++.    .+++.     +.++.|.+||.++++.+..+..+..+  .++|+| |+++|++++      
T Consensus        18 ~~~~p~~~~a~spdg~----~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~Sp-DG~~l~va~~~~~~~   90 (373)
T d2madh_          18 AADGPTNDEAPGADGR----RSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRI   90 (373)
T ss_pred             cCCCCccccccCCCCC----EEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcC-CCCEEEEEeecCCcc
Confidence            4678899999999995    66553     23467999999999999988765543  799999 999998875      


Q ss_pred             ----cCCeEEEEECCCcceeeeeccccCCCCce-------EEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhcc-
Q psy10348         77 ----KDHTLRLWNIKTDICIAIFGGVEGHRDEV-------LSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAE-  142 (291)
Q Consensus        77 ----~dg~i~vwd~~~~~~~~~~~~~~~~~~~i-------~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~-  142 (291)
                          .++.|.+||..+++.+..+   ..+....       ..+.|+++++.++...  .++.+.+|+....+....... 
T Consensus        91 ~~~~~~~~v~v~D~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (373)
T d2madh_          91 AKGKRTDYVEVFDPVTFLPIADI---ELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSP  167 (373)
T ss_pred             cccccceEEEEEECCCCcEEEEE---ecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEeccc
Confidence                4578999999999887776   3333322       4567888887665544  356788888777655444332 


Q ss_pred             -ccccCCCCcccc-----------ccCccccCcccc----cccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCcc
Q psy10348        143 -SYTFNPARSTRP-----------FDTQKEHFPQFS----TRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDK  205 (291)
Q Consensus       143 -~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~  205 (291)
                       ...+.+++....           +...........    ...........+.+. +..++..+.++.+.+|+.......
T Consensus       168 ~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  247 (373)
T d2madh_         168 TCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT  247 (373)
T ss_pred             eeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEE
Confidence             233344332221           111100000000    001112223334444 345666778999999998776542


Q ss_pred             ccccCCCceeeeeeecCCcccEEEEEEEe--------cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccce
Q psy10348        206 ELRTNETNVTIINRLNFKDCEIWFIRFSM--------DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAV  277 (291)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v  277 (291)
                      ........................+.+.+        .+++..++....++.+.+||..+++.+    ..+   .+...+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~----~~~---~~~~~~  320 (373)
T d2madh_         248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS----SQI---SLGHDV  320 (373)
T ss_pred             EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEE----EEe---cCCCCe
Confidence            11111100000000000011111111221        122444556667788999999998532    222   344678


Q ss_pred             eeeEEccCCcee
Q psy10348        278 RQTTLSKNGNVL  289 (291)
Q Consensus       278 ~~~~~s~~g~~l  289 (291)
                      .+++|+|||+.+
T Consensus       321 ~~~a~spDG~~~  332 (373)
T d2madh_         321 DAISVAQDGGPD  332 (373)
T ss_pred             eEEEECCCCCEE
Confidence            999999999854

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.76  E-value=6.8e-17  Score=125.30  Aligned_cols=231  Identities=10%  Similarity=-0.073  Sum_probs=147.3

Q ss_pred             eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEee---
Q psy10348          6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVS---   76 (291)
Q Consensus         6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~---   76 (291)
                      .+.+...+.+++|+||+.   .+++++..++.|++||+.+++.+..+...      ...+..++|+| +++++++++   
T Consensus        35 ~~~~~~~p~~l~~spDG~---~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~-DG~~l~v~~~~~  110 (346)
T d1jmxb_          35 VMPDKFGPGTAMMAPDNR---TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPT  110 (346)
T ss_dssp             ECSSCCSSCEEEECTTSS---EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEE
T ss_pred             EcCCCCCcceEEECCCCC---EEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEec-CCCEEEEEecCC
Confidence            345566788999999985   23466678899999999999988777532      23567899999 888887765   


Q ss_pred             ---------cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----
Q psy10348         77 ---------KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----  142 (291)
Q Consensus        77 ---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----  142 (291)
                               .++.+.+|+..+++....+.. ......+..+.+++++..++++   +.+.+|++.+++....+..     
T Consensus       111 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  186 (346)
T d1jmxb_         111 QRLNDHYVVKPPRLEVFSTADGLEAKPVRT-FPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWNR  186 (346)
T ss_dssp             EECSSCEEECCCEEEEEEGGGGGGBCCSEE-EECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCCC
T ss_pred             cceeeeeccCcceEEEEecccceeeeEEEe-eeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCCCcc
Confidence                     467899999888776554421 1223445566677777655543   5689999988776655432     


Q ss_pred             ccccCCCCccccccCcc-----------------------------------ccCcccccccccCcceeEEEEc--CCEE
Q psy10348        143 SYTFNPARSTRPFDTQK-----------------------------------EHFPQFSTRDIHRNYVDCVRWL--GDFV  185 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~v~~~~~~--~~~l  185 (291)
                      ...+.|.+.........                                   ...........|...+..+.++  +.++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (346)
T d1jmxb_         187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ  266 (346)
T ss_dssp             TTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE
T ss_pred             ceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEE
Confidence            22333332221110000                                   0000011112344555666665  4455


Q ss_pred             EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        186 LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      +... ++.|.+||..+.+.            +..+... ..+..  ++++|||++|++++.||.|++||..+++.
T Consensus       267 ~~~~-~~~v~v~d~~~~~~------------~~~~~~~-~~~~~--va~s~DG~~l~v~~~d~~v~v~D~~t~~~  325 (346)
T d1jmxb_         267 IYGV-LNRLAKYDLKQRKL------------IKAANLD-HTYYC--VAFDKKGDKLYLGGTFNDLAVFNPDTLEK  325 (346)
T ss_dssp             EEEE-ESEEEEEETTTTEE------------EEEEECS-SCCCE--EEECSSSSCEEEESBSSEEEEEETTTTEE
T ss_pred             EEec-CCeEEEEECCCCcE------------EEEEcCC-CCEEE--EEEcCCCCEEEEEeCCCcEEEEECccCCE
Confidence            5443 57899999988743            4444432 23444  45567799999999999999999999853

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=9.4e-16  Score=118.29  Aligned_cols=234  Identities=9%  Similarity=0.043  Sum_probs=141.8

Q ss_pred             eeecceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccCCcceeEEEe---eeccceeEEEEecCCCcEEEEeec-CCeE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPAFHACVRHFY---GHGHAINELKFHPQDFNLLLSVSK-DHTL   81 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~-dg~i   81 (291)
                      +.+.+.+.+++|+||+.    +| +++..|+.|++|++........+.   .+...+..++|+| ++++|++++. ++.|
T Consensus        33 ~~~~~~v~~la~spDG~----~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~sp-Dg~~l~v~~~~~~~v  107 (333)
T d1ri6a_          33 VDVPGQVQPMVVSPDKR----YLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDH-QGQFVFVGSYNAGNV  107 (333)
T ss_dssp             EECSSCCCCEEECTTSS----EEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECT-TSSEEEEEETTTTEE
T ss_pred             EcCCCCEeEEEEeCCCC----EEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcC-CCCEEeecccCCCce
Confidence            45778899999999994    66 455568999999998665433332   2345678899999 8898888875 6789


Q ss_pred             EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhc------------cccccCC
Q psy10348         82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACA------------ESYTFNP  148 (291)
Q Consensus        82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~------------~~~~~~~  148 (291)
                      .+|+........... ...+...+.++.++|++++++.++. +..+.+|+...........            ..+.+.+
T Consensus       108 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~  186 (333)
T d1ri6a_         108 SVTRLEDGLPVGVVD-VVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP  186 (333)
T ss_dssp             EEEEEETTEEEEEEE-EECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT
T ss_pred             eeeccccccceeccc-ccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEec
Confidence            999887665443332 1456677889999999998887775 5679999986644322111            1223333


Q ss_pred             CCccccccCcc-------------ccCcc------cccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccc
Q psy10348        149 ARSTRPFDTQK-------------EHFPQ------FSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKE  206 (291)
Q Consensus       149 ~~~~~~~~~~~-------------~~~~~------~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~  206 (291)
                      .+.........             .....      .............++++  ++ .++.+..++.+.+|++...... 
T Consensus       187 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~-  265 (333)
T d1ri6a_         187 NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV-  265 (333)
T ss_dssp             TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC-
T ss_pred             cceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCE-
Confidence            32221111000             00000      00001122334556666  44 4555667889999988655332 


Q ss_pred             cccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCC
Q psy10348        207 LRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDV  257 (291)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~  257 (291)
                              ..+............  ++++|||++|++++ .++.|++|++..
T Consensus       266 --------~~~~~~~~~~~~p~~--~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         266 --------LSKEGFQPTETQPRG--FNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             --------EEEEEEEECSSSCCC--EEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             --------EEEEEEeCCCCCeeE--EEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence                    111111112222222  45678899987765 568999996643

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.72  E-value=9.7e-16  Score=119.38  Aligned_cols=247  Identities=9%  Similarity=0.010  Sum_probs=132.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEe----------cCCCeEEEEccCCcceeEEEeeecc-------ceeEEEEecCCCcEEE
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVA----------GSRAVIRIFSPAFHACVRHFYGHGH-------AINELKFHPQDFNLLL   73 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~----------~~dg~i~vw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~   73 (291)
                      +....++||||+.    +|++.          ..|+.|++||+.+++.+..+..+..       ....++|+| ++++++
T Consensus        47 g~~~~~a~SpDg~----~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~  121 (355)
T d2bbkh_          47 GFLPNPVVADDGS----FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLL  121 (355)
T ss_dssp             CSSCEEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEE
T ss_pred             CCCCceEEcCCCC----EEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEec-CCCeeE
Confidence            3444789999995    66653          3478999999999998888764432       345689999 888777


Q ss_pred             Eee--cCCeEEEEECCCcceeeeeccccCCC-------CceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhcc-
Q psy10348         74 SVS--KDHTLRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAE-  142 (291)
Q Consensus        74 s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~-  142 (291)
                      .++  .+..+.+|+..+++.+..+.   .+.       .....+.+++++..++... .++.+.+++............ 
T Consensus       122 v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  198 (355)
T d2bbkh_         122 FYQFSPAPAVGVVDLEGKAFKRMLD---VPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLIN  198 (355)
T ss_dssp             EEECSSSCEEEEEETTTTEEEEEEE---CCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCS
T ss_pred             EecCCCCceeeeeecCCCcEeeEEe---cCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceee
Confidence            654  45789999999887776652   111       1223345556655444332 234445554443332211110 


Q ss_pred             ccccCCC----------CccccccCccccCccccccc----------ccCcceeEEEEc--CCEEEEec----------C
Q psy10348        143 SYTFNPA----------RSTRPFDTQKEHFPQFSTRD----------IHRNYVDCVRWL--GDFVLSKS----------C  190 (291)
Q Consensus       143 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~--~~~l~~~~----------~  190 (291)
                      ...+.+.          +....+.........+....          ........++++  +..++...          .
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  278 (355)
T d2bbkh_         199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA  278 (355)
T ss_dssp             CCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred             eccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCC
Confidence            0000000          00000000000000000000          011122335554  44444332          2


Q ss_pred             CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc--EEEEEcCCCcEEEEEcCCCCCCcceeEEE
Q psy10348        191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK--ILAVGNQSGRTYVWDLDVQDPSSIKFQIL  268 (291)
Q Consensus       191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  268 (291)
                      ...|.+||..+.+.            +..+... ..+.  .++++|||+  ++++++.|+.|++||+.+++.    ...+
T Consensus       279 ~~~v~v~d~~t~~~------------~~~~~~~-~~~~--~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~----~~~i  339 (355)
T d2bbkh_         279 SRFVVVLDAKTGER------------LAKFEMG-HEID--SINVSQDEKPLLYALSTGDKTLYIHDAESGEE----LRSV  339 (355)
T ss_dssp             EEEEEEEETTTCCE------------EEEEEEE-EEEC--EEEECCSSSCEEEEEETTTTEEEEEETTTCCE----EEEE
T ss_pred             CCeEEEEeCCCCcE------------EEEecCC-CCEE--EEEEcCCCCeEEEEEECCCCEEEEEECCCCCE----EEEE
Confidence            35799999988754            4444322 2233  455667787  456778899999999999853    2334


Q ss_pred             eccccccceeeeEEccCC
Q psy10348        269 SHPRCMSAVRQTTLSKNG  286 (291)
Q Consensus       269 ~~~~~~~~v~~~~~s~~g  286 (291)
                      .  .+......+.+.++|
T Consensus       340 ~--~~G~~p~~i~~~d~~  355 (355)
T d2bbkh_         340 N--QLGHGPQVITTADMG  355 (355)
T ss_dssp             C--CCCSSCCEEECCCCC
T ss_pred             e--CcCCCccEEEeCCCC
Confidence            3  233344555555543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.64  E-value=5.4e-13  Score=104.34  Aligned_cols=242  Identities=8%  Similarity=-0.080  Sum_probs=135.0

Q ss_pred             eEEEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee---------------------------
Q psy10348         13 FYTCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH---------------------------   55 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~---------------------------   55 (291)
                      ...++|+||+.    +|++++          .++.|.+||..+++.+..+..+                           
T Consensus        68 ~~~~a~SpDG~----~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~  143 (373)
T d2madh_          68 LPNPVAAHSGS----EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ  143 (373)
T ss_pred             CccEEEcCCCC----EEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEE
Confidence            34789999994    777764          4578999999988765443211                           


Q ss_pred             --------------------ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccc---cCCCCceEEEEEcc
Q psy10348         56 --------------------GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV---EGHRDEVLSADFDL  112 (291)
Q Consensus        56 --------------------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~  112 (291)
                                          .....++.++|+....+++.+.|+.+.+|+...+.........   .........+.+.+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (373)
T d2madh_         144 FAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK  223 (373)
T ss_pred             EcCCCceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECC
Confidence                                1223345566633345567778888888888777665543210   11222334455565


Q ss_pred             CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCC
Q psy10348        113 LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCE  191 (291)
Q Consensus       113 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d  191 (291)
                      ++. ++..+.++.+.+|+..............  ....... .. ............ ........... +..++....+
T Consensus       224 ~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~-~~-~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~  297 (373)
T d2madh_         224 SGR-IVWPVYSGKILQADISAAGATNKAPIDA--LSGGRKA-DT-WRPGGWQQVAYL-KSSDGIYLLTSEQSAWKLHAAA  297 (373)
T ss_pred             Cce-EEEecCCceEEEEEcCCCeEEEEEeecc--ccCcEEe-ee-eccCcceeeEEe-cCCCeEEEecCCCceEEeecCC
Confidence            554 4555678899999988765332211100  0000000 00 000000000000 00111111112 5567778888


Q ss_pred             CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc--EEEEEcCCCcEEEEEcCCCCCCcceeEEEe
Q psy10348        192 NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK--ILAVGNQSGRTYVWDLDVQDPSSIKFQILS  269 (291)
Q Consensus       192 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  269 (291)
                      +.+.+||..+++.            +..+... ..+..  +.++|||+  ++++++.|+.|++||+.+++.    ...+.
T Consensus       298 ~~v~~~d~~t~~~------------~~~~~~~-~~~~~--~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~----~~~~~  358 (373)
T d2madh_         298 KEVTSVTGLVGQT------------SSQISLG-HDVDA--ISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ----DQSTV  358 (373)
T ss_pred             CeEEEEECCCCcE------------EEEecCC-CCeeE--EEECCCCCEEEEEEeCCCCeEEEEECCCCCE----EEEEC
Confidence            9999999988854            4444432 33444  45567788  456789999999999999963    23333


Q ss_pred             ccccccceeeeEEccC
Q psy10348        270 HPRCMSAVRQTTLSKN  285 (291)
Q Consensus       270 ~~~~~~~v~~~~~s~~  285 (291)
                        .+....+.|++.++
T Consensus       359 --~~g~~P~~l~~~~~  372 (373)
T d2madh_         359 --ELGSGPQVLSVMNE  372 (373)
T ss_pred             --CCCCCCcEEEEecC
Confidence              34456677776554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.56  E-value=1.5e-13  Score=107.89  Aligned_cols=267  Identities=11%  Similarity=-0.004  Sum_probs=152.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEE-ecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCc--EEEEeecCC-------
Q psy10348         11 ENFYTCAWSMDLESGRPLLAV-AGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFN--LLLSVSKDH-------   79 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~--~l~s~~~dg-------   79 (291)
                      -.......+||+    ++|++ ...++.|.++|+++++..+.+. .+......++|+| +++  +++..+.+.       
T Consensus        72 P~~s~t~gtpDG----r~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~sp-dg~t~YV~~~~~~~v~~~~dg  146 (441)
T d1qnia2          72 PHISMTDGRYDG----KYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQK-VPKTNYVFCNAEFVIPQPNDG  146 (441)
T ss_dssp             CEEEEETTEEEE----EEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECC-SSBCCEEEEEECSCEESSCSS
T ss_pred             CCcceecccCCC----CEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEec-cCCEEEEEeccCCcccccCcc
Confidence            445555667887    46644 4578899999999999887775 3456789999999 777  444433332       


Q ss_pred             ----------eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-cEEEEeccCchhhhhhc-----cc
Q psy10348         80 ----------TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-SLKLWDLTKPEIKDACA-----ES  143 (291)
Q Consensus        80 ----------~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~-----~~  143 (291)
                                .+..+|..+.+....+    .-......+.|+|+|+++++++.+. .+..++..+......+.     ..
T Consensus       147 ~~~~~~~~~~~~~~iD~~t~~v~~qI----~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~  222 (441)
T d1qnia2         147 TDFSLDNSYTMFTAIDAETMDVAWQV----IVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI  222 (441)
T ss_dssp             SCCCGGGEEEEEEEEETTTCSEEEEE----EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHH
T ss_pred             cccccccccceEEeecCccceeeEEE----ecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccce
Confidence                      2345777776666655    2234578899999999998887653 33333333332221111     01


Q ss_pred             cccCCCCccccc--------cCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCC
Q psy10348        144 YTFNPARSTRPF--------DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNET  212 (291)
Q Consensus       144 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~  212 (291)
                      ..+.+++....+        .... ............ ....+.++  |+++ +++..+++|.+||+.+.....-.....
T Consensus       223 ~~~~~dGk~~~v~~~~v~vvd~~~-~~~v~~~IPvgk-sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~  300 (441)
T d1qnia2         223 AAAVKAGNFKTIGDSKVPVVDGRG-ESEFTRYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIEL  300 (441)
T ss_dssp             HHHHHTTCCBCCTTCCCCEEECSS-SCSSEEEECCBS-SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCG
T ss_pred             EEEecCCCEEEeCCCCcEEEEccc-CCceEEEEeCCC-CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCc
Confidence            111122211111        1100 011111111122 24567776  6665 567779999999987643211000000


Q ss_pred             ceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC------CCCCcceeEEE---eccccccceeeeEEc
Q psy10348        213 NVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV------QDPSSIKFQIL---SHPRCMSAVRQTTLS  283 (291)
Q Consensus       213 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~------~~~~~~~~~~~---~~~~~~~~v~~~~~s  283 (291)
                      ...........   .-.+.-+++++|..+.+...|..|..|++..      ++........+   ...+|...+.+.+++
T Consensus       301 ~~~~~~~~~~g---lgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~  377 (441)
T d1qnia2         301 RDTIVAEPELG---LGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRD  377 (441)
T ss_dssp             GGGEEECCBCC---SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTT
T ss_pred             ceEEEeecccc---cCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccC
Confidence            00111111111   1123456778899999999999999999852      22221222222   125888999999999


Q ss_pred             cCCceeeC
Q psy10348        284 KNGNVLLC  291 (291)
Q Consensus       284 ~~g~~l~s  291 (291)
                      |||+||++
T Consensus       378 pdGk~l~s  385 (441)
T d1qnia2         378 ADGKWLVV  385 (441)
T ss_dssp             CCCCEEEE
T ss_pred             CCCcEEEe
Confidence            99999985

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.54  E-value=2.7e-13  Score=109.65  Aligned_cols=115  Identities=10%  Similarity=-0.064  Sum_probs=85.0

Q ss_pred             cceeEEEEeeeccCCCCCEEEEecC---------CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVAGS---------RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~~~---------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      ...|.++.||||+    ++|+.++.         ++.+.+||+++++. ..+..+...+..+.|+| +|+.+|.. .++.
T Consensus        61 ~~~i~~~~~SpDg----~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~~~~~~~~~~~SP-DG~~ia~~-~~~~  133 (470)
T d2bgra1          61 GHSINDYSISPDG----QFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEERIPNNTQWVTWSP-VGHKLAYV-WNND  133 (470)
T ss_dssp             SSCCCEEEECTTS----SEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCCTTEEEEEECS-STTCEEEE-ETTE
T ss_pred             cCccceeEECCCC----CEEEEEECCcceeeeccCceEEEEECCCCcc-cccccCCcccccccccc-CcceeeEe-eccc
Confidence            4678999999999    48887743         57889999998774 45777888999999999 99999985 4678


Q ss_pred             EEEEECCCcceeeeeccc------c---------CCCCceEEEEEccCCCEEEEEecCCc-EEEEec
Q psy10348         81 LRLWNIKTDICIAIFGGV------E---------GHRDEVLSADFDLLGTKIMSCGMDHS-LKLWDL  131 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~------~---------~~~~~i~~~~~~~~~~~l~~~~~d~~-i~v~d~  131 (291)
                      +.+|+..+++..+.....      .         ...+....+.|+|||++|+....|.+ +..|++
T Consensus       134 l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~  200 (470)
T d2bgra1         134 IYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY  200 (470)
T ss_dssp             EEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred             ceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence            999999988766543100      0         01223456789999999998876543 444443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.54  E-value=1.1e-13  Score=108.33  Aligned_cols=111  Identities=9%  Similarity=-0.065  Sum_probs=79.7

Q ss_pred             EEEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeeecc-------ceeEEEEecCCCcEEEEee
Q psy10348         14 YTCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGHGH-------AINELKFHPQDFNLLLSVS   76 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~s~~   76 (291)
                      ..++|+||+.    .+++.+          .|+.|++||..+++++..+..+..       ....++|+| |+++|+++.
T Consensus        68 ~~~a~spDg~----~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~Sp-DGk~l~va~  142 (368)
T d1mdah_          68 SLAVAGHSGS----DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFL  142 (368)
T ss_dssp             CEEEECTTSS----CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEE
T ss_pred             CcceECCCCC----EEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECC-CCCEEEEEe
Confidence            4588999984    777643          478899999999999888865432       234689999 888887775


Q ss_pred             -cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348         77 -KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE  135 (291)
Q Consensus        77 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  135 (291)
                       .++.+.+||+.+++....+   ..+.....   +......++..+.||.+.++++....
T Consensus       143 ~~~~~v~~~d~~~~~~~~~~---~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~  196 (368)
T d1mdah_         143 FGSSAAAGLSVPGASDDQLT---KSASCFHI---HPGAAATHYLGSCPASLAASDLAAAP  196 (368)
T ss_dssp             CSSSCEEEEEETTTEEEEEE---ECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSC
T ss_pred             CCCCeEEEEECCCCcEeEEe---eccCcceE---ccCCCceEEEEcCCCCEEEEEecCCc
Confidence             5789999999999888876   33332211   11223466667778888888876654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.46  E-value=6.1e-11  Score=89.85  Aligned_cols=237  Identities=8%  Similarity=-0.015  Sum_probs=150.1

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      ..+..++++|++    .++++...+++|..|+.. ++ ...+......+.+++|.+ +++++++...++.+..++.....
T Consensus        28 ~~~e~iAv~pdG----~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~-dG~l~v~~~~~~~~~~~~~~~~~  100 (302)
T d2p4oa1          28 TFLENLASAPDG----TIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD  100 (302)
T ss_dssp             CCEEEEEECTTS----CEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred             CCcCCEEECCCC----CEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcC-CCCeEEEecCCceEEEEEecccc
Confidence            457789999998    499999999999999865 44 334445667899999999 89999998888888888765332


Q ss_pred             e-eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         91 C-IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        91 ~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      . ...+.. .........+++.++++++++.+.++.+..+|...+........... .+                 ....
T Consensus       101 ~~~~~~~~-~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~  161 (302)
T d2p4oa1         101 GTVETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML-AR-----------------SNSE  161 (302)
T ss_dssp             SCEEEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG-SC-----------------SSTT
T ss_pred             cceeeccc-cCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCcc-ce-----------------eecc
Confidence            1 112111 23456688999999999888888888888888776542211110000 00                 0001


Q ss_pred             ccCcceeEEEEcCC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        170 IHRNYVDCVRWLGD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       170 ~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      ........+.++++ ++++.+..+.|..++..........      ..........      .++++++|+++++...++
T Consensus       162 ~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~------~~~~~~~~pd------gia~d~dG~l~va~~~~~  229 (302)
T d2p4oa1         162 SVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP------EIFVEQTNID------DFAFDVEGNLYGATHIYN  229 (302)
T ss_dssp             CCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCC------EEEEESCCCS------SEEEBTTCCEEEECBTTC
T ss_pred             CcccccccccccCCceeeecCCCCeEEecccccccccccc------ccccCCCCCc------ceEECCCCCEEEEEcCCC
Confidence            12233556777744 5566677888888887654321000      1111111111      256778899888888889


Q ss_pred             cEEEEEcCCCCCCcceeEEEeccccccceeeeEE---ccCCceee
Q psy10348        249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL---SKNGNVLL  290 (291)
Q Consensus       249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~g~~l~  290 (291)
                      .|..++.....     .........-..+++++|   ++|++.|.
T Consensus       230 ~V~~i~p~G~~-----~~~~~~~~~~~~pt~vafg~~~~D~~~Ly  269 (302)
T d2p4oa1         230 SVVRIAPDRST-----TIIAQAEQGVIGSTAVAFGQTEGDCTAIY  269 (302)
T ss_dssp             CEEEECTTCCE-----EEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred             cEEEECCCCCE-----EEEEecCCCCCCceEEEEcCCCCCCCEEE
Confidence            99999776431     122222222345789999   77888663

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.37  E-value=1.6e-10  Score=90.50  Aligned_cols=244  Identities=11%  Similarity=0.017  Sum_probs=133.5

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEee------------------------------eccceeEEEEecCCCcEEEEe-e
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYG------------------------------HGHAINELKFHPQDFNLLLSV-S   76 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~~l~s~-~   76 (291)
                      .+++++.+|.|++|++.+++.++.+..                              |........++| ||++|++. .
T Consensus        13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtp-DGr~lfV~d~   91 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRY-DGKYLFINDK   91 (441)
T ss_dssp             EEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEE-EEEEEEEEET
T ss_pred             EEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccC-CCCEEEEEcC
Confidence            467788999999999999998887632                              112234444578 78877655 5


Q ss_pred             cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCE--EEEEecCC-----------------cEEEEeccCchhh
Q psy10348         77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTK--IMSCGMDH-----------------SLKLWDLTKPEIK  137 (291)
Q Consensus        77 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~~~~~d~-----------------~i~v~d~~~~~~~  137 (291)
                      .+.+|.++|+.+++....+.  ..+...+..++|+|+|++  ++..+.+.                 .+..+|..+.+..
T Consensus        92 ~~~rVavIDl~t~k~~~ii~--iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~  169 (441)
T d1qnia2          92 ANTRVARIRLDIMKTDKITH--IPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVA  169 (441)
T ss_dssp             TTTEEEEEETTTTEEEEEEE--CTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEE
T ss_pred             CCCEEEEEECCCCcEeeEEe--cCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceee
Confidence            67899999999998877653  256778999999999984  44433322                 1244666665544


Q ss_pred             hhhc-----cccccCCCCccccccCccccCc-ccccc-cccCcceeEEEE------c--CCEEEEecCCCeEEEecCCCC
Q psy10348        138 DACA-----ESYTFNPARSTRPFDTQKEHFP-QFSTR-DIHRNYVDCVRW------L--GDFVLSKSCENCIICWKPGRL  202 (291)
Q Consensus       138 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~v~~~~~------~--~~~l~~~~~d~~i~iwd~~~~  202 (291)
                      .++.     ..+.+.|++............. .+... ..-...|....+      .  |+++.. +.++.+.+++....
T Consensus       170 ~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~  248 (441)
T d1qnia2         170 WQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI-GDSKVPVVDGRGES  248 (441)
T ss_dssp             EEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCC-TTCCCCEEECSSSC
T ss_pred             EEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEe-CCCCcEEEEcccCC
Confidence            3332     2344455554333222111100 00000 000011111111      1  444443 33566666665443


Q ss_pred             CccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE-EcCCCcEEEEEcCCCCC-----CcceeEEEeccccccc
Q psy10348        203 EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV-GNQSGRTYVWDLDVQDP-----SSIKFQILSHPRCMSA  276 (291)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~  276 (291)
                      ..            +..+.....+- .  +..+|||+++++ +..+++|.|||+.+.+.     +.............-.
T Consensus       249 ~v------------~~~IPvgksPh-G--v~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glg  313 (441)
T d1qnia2         249 EF------------TRYIPVPKNPH-G--LNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLG  313 (441)
T ss_dssp             SS------------EEEECCBSSCC-C--EEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSC
T ss_pred             ce------------EEEEeCCCCcc-C--ceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccC
Confidence            22            34444333321 2  455688998755 66899999999875321     1111111121111223


Q ss_pred             eeeeEEccCCceee
Q psy10348        277 VRQTTLSKNGNVLL  290 (291)
Q Consensus       277 v~~~~~s~~g~~l~  290 (291)
                      ....+|+++|+.+.
T Consensus       314 plh~~fd~~g~~yt  327 (441)
T d1qnia2         314 PLHTTFDGRGNAYT  327 (441)
T ss_dssp             EEEEEECSSSEEEE
T ss_pred             cccceecCCceEEE
Confidence            45568888886543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.32  E-value=7.2e-10  Score=81.89  Aligned_cols=223  Identities=7%  Similarity=-0.037  Sum_probs=134.3

Q ss_pred             eeEEEEeeeccCCCCCEEEE-ecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348         12 NFYTCAWSMDLESGRPLLAV-AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI   90 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~   90 (291)
                      .-.++++.++++    ++++ .+..+.+..++............-......+++.+ ++.++++...++.+++++-.++.
T Consensus        15 ~P~~vavd~dG~----i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~-~g~i~v~d~~~~~i~~~~~~~~~   89 (260)
T d1rwia_          15 SPSGVAVDSAGN----VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDFNNRVVTLAAGSNNQ   89 (260)
T ss_dssp             CEEEEEECTTCC----EEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECT-TCCEEEEETTTEEEEECTTCSCC
T ss_pred             CCCEEEEcCCCC----EEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcC-CCCEEEeeeeeceeeeeeeccce
Confidence            347889998884    5554 45567788777654332221111123457889999 88888877777777776655554


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI  170 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (291)
                      .+...    .......++++.++++++++-..+..+..++...........                            .
T Consensus        90 ~~~~~----~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~----------------------------~  137 (260)
T d1rwia_          90 TVLPF----DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF----------------------------T  137 (260)
T ss_dssp             EECCC----CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCC----------------------------C
T ss_pred             eeeee----eeeeecccccccccceeEeeccccccccccccccceeeeeee----------------------------c
Confidence            44333    334567899999999877776666667777654433111000                            0


Q ss_pred             cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348        171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG  248 (291)
Q Consensus       171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg  248 (291)
                      .......++++  ++++++...++.|..+|.......           .... ..-...  ..++++++|.++++....+
T Consensus       138 ~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~-----------~~~~-~~~~~p--~gi~~d~~g~l~vsd~~~~  203 (260)
T d1rwia_         138 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-----------VLPF-TDITAP--WGIAVDEAGTVYVTEHNTN  203 (260)
T ss_dssp             SCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE-----------ECCC-SSCCSE--EEEEECTTCCEEEEETTTT
T ss_pred             ccCCcceeeecCCCCEeeeccccccccccccccceee-----------eeec-cccCCC--ccceeeeeeeeeeeecCCC
Confidence            11223466765  677777788889999997765321           1111 111112  3456678899888888888


Q ss_pred             cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      .|..++......     ..... ..-....+|+++++|+++++
T Consensus       204 ~i~~~~~~~~~~-----~~~~~-~~~~~P~~i~~d~~g~l~va  240 (260)
T d1rwia_         204 QVVKLLAGSTTS-----TVLPF-TGLNTPLAVAVDSDRTVYVA  240 (260)
T ss_dssp             EEEEECTTCSCC-----EECCC-CSCCCEEEEEECTTCCEEEE
T ss_pred             EEEEEeCCCCeE-----EEEcc-CCCCCeEEEEEeCCCCEEEE
Confidence            898888765431     22221 22245689999999987664

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.32  E-value=3.9e-11  Score=96.70  Aligned_cols=112  Identities=14%  Similarity=0.201  Sum_probs=89.4

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEeec---------CCe
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVSK---------DHT   80 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~---------dg~   80 (291)
                      .+.|.+++    .++..  .++.+.+||+.+++....+..     |...|.++.|+| |+++|+.++.         ++.
T Consensus        21 ~~~W~~d~----~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~~~   93 (470)
T d2bgra1          21 SLRWISDH----EYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTAS   93 (470)
T ss_dssp             CCEECSSS----EEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEE
T ss_pred             CCEeCCCC----EEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECC-CCCEEEEEECCcceeeeccCce
Confidence            56788877    36654  478899999999987665543     446799999999 9999888753         567


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhh
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD  138 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~  138 (291)
                      +.+||+.+++.. .+   ..+...+..+.|+|||+.++... ++.+.+|+..+++..+
T Consensus        94 ~~l~d~~~~~~~-~l---~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~  146 (470)
T d2bgra1          94 YDIYDLNKRQLI-TE---ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR  146 (470)
T ss_dssp             EEEEETTTTEEC-CS---SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred             EEEEECCCCccc-cc---ccCCccccccccccCcceeeEee-cccceEEECCCCceee
Confidence            899999987644 34   67889999999999999999865 7789999998887544

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.23  E-value=8.6e-09  Score=79.90  Aligned_cols=253  Identities=8%  Similarity=-0.054  Sum_probs=134.4

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-ceeEEE-eeeccceeEEEEecCCCcE--EEEee-cCCeEEE
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-ACVRHF-YGHGHAINELKFHPQDFNL--LLSVS-KDHTLRL   83 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-~~~~~~-~~~~~~v~~~~~~~~~~~~--l~s~~-~dg~i~v   83 (291)
                      ....+.-++|+|++    ++|++... +.+..|.+... ...... .........+.+++ +++.  ++++. ..+.|..
T Consensus        38 ~~~~~s~la~s~d~----~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~-~~~~~~v~~a~~~~~~v~~  111 (365)
T d1jofa_          38 QDEPISWMTFDHER----KNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYA  111 (365)
T ss_dssp             TTCCCSEEEECTTS----SEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEE
T ss_pred             CCCCCCEEEEcCCC----CEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECC-CCCEEEEEEecCCCCEEEE
Confidence            34455679999998    47776654 56777776532 222222 11223456778888 6664  33332 2355555


Q ss_pred             EECCC-cceeee------------ec-cccCCCCceEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCC
Q psy10348         84 WNIKT-DICIAI------------FG-GVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        84 wd~~~-~~~~~~------------~~-~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                      +.+.. +.....            .. ........+.++.|+|+|++++++.. ...|.+|+......+........   
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~---  188 (365)
T d1jofa_         112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDA---  188 (365)
T ss_dssp             EEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC---
T ss_pred             eEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceee---
Confidence            54321 111000            00 00122334789999999998888765 45788887654322111100000   


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCC-----ceeeeeee
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNET-----NVTIINRL  220 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~  220 (291)
                                          .........+.|+  ++++ ++...+++|.+|++.............     ....-...
T Consensus       189 --------------------~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (365)
T d1jofa_         189 --------------------PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP  248 (365)
T ss_dssp             --------------------SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred             --------------------cCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccccccccc
Confidence                                0123456788898  5555 555568999999987654321110000     00000000


Q ss_pred             cCCcccEEEEEEEecCCCcEEEEEcC------CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceee
Q psy10348        221 NFKDCEIWFIRFSMDYWQKILAVGNQ------SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLL  290 (291)
Q Consensus       221 ~~~~~~i~~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~  290 (291)
                      ...........+.++|||++|+++..      .+.|..|++.....+................++++++| +|++|+
T Consensus       249 ~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~  325 (365)
T d1jofa_         249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMA  325 (365)
T ss_dssp             TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEE
T ss_pred             ccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEE
Confidence            11122334455677888999988742      22377788776543322222223223345678899998 899875

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.18  E-value=8.5e-08  Score=71.28  Aligned_cols=226  Identities=13%  Similarity=0.125  Sum_probs=141.7

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEe-ecCCeEEEEE
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSV-SKDHTLRLWN   85 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~-~~dg~i~vwd   85 (291)
                      ...+++++++    +++++-..++.|++||.+ |+.+..+...      ...-..+++.+..+..+++. +.++.|..++
T Consensus        25 P~gvavd~dg----~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~   99 (279)
T d1q7fa_          25 PSGVAVNAQN----DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN   99 (279)
T ss_dssp             EEEEEECTTC----CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred             ccEEEEcCCC----CEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccc
Confidence            5788998887    478777788999999965 7777766321      11234566665344555443 4556788887


Q ss_pred             CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      .. +.....+.  .........++..+++..+++....+.+.+++... +.+..+..                       
T Consensus       100 ~~-g~~~~~~~--~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g-~~~~~~g~-----------------------  152 (279)
T d1q7fa_         100 QY-GQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGC-----------------------  152 (279)
T ss_dssp             TT-SCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEEC-----------------------
T ss_pred             cc-ccceeecC--CCcccccceeccccCCcEEEEeeccceeeEeccCC-ceeecccc-----------------------
Confidence            54 66666552  34456678899999998888877777788887543 32222110                       


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV  243 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  243 (291)
                         ..+......++++  ++++++....+.|++||....             .+.++......-....++.+++|+++++
T Consensus       153 ---~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~-------------~~~~~g~~g~~~~P~giavD~~G~i~Va  216 (279)
T d1q7fa_         153 ---SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-------------YLRQIGGEGITNYPIGVGINSNGEILIA  216 (279)
T ss_dssp             ---TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-------------EEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred             ---cccccccceeeeccceeEEeeeccccceeeeecCCc-------------eeeeecccccccCCcccccccCCeEEEE
Confidence               1134456677776  667777788899999987542             1333321111111234567788987776


Q ss_pred             Ec-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348        244 GN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC  291 (291)
Q Consensus       244 ~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s  291 (291)
                      -. .++.|.+|+.. ++    ....+...........|++.|||+++++
T Consensus       217 d~~~~~~v~~f~~~-G~----~~~~~~~~~~~~~p~~vav~~dG~l~V~  260 (279)
T d1q7fa_         217 DNHNNFNLTIFTQD-GQ----LISALESKVKHAQCFDVALMDDGSVVLA  260 (279)
T ss_dssp             ECSSSCEEEEECTT-SC----EEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred             ECCCCcEEEEECCC-CC----EEEEEeCCCCCCCEeEEEEeCCCcEEEE
Confidence            54 35579999854 42    3344443333346789999999987663

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.18  E-value=1.1e-09  Score=85.17  Aligned_cols=206  Identities=8%  Similarity=-0.104  Sum_probs=118.5

Q ss_pred             EEEEeeeccCCCCCEEEEec-CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348         14 YTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI   92 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~   92 (291)
                      ..++|+||+.    +|+++. .++.+.+||+.+++.+..+..+....    +.+.....++..+.||.+.++++......
T Consensus       127 ~~~a~SpDGk----~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~  198 (368)
T d1mdah_         127 HIIGNCASSA----CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH----IHPGAAATHYLGSCPASLAASDLAAAPAA  198 (368)
T ss_dssp             TSEEECTTSS----CEEEEECSSSCEEEEEETTTEEEEEEECSSCCC----CEEEETTEEECCCCTTSCEEEECCSSCCC
T ss_pred             cceEECCCCC----EEEEEeCCCCeEEEEECCCCcEeEEeeccCcce----EccCCCceEEEEcCCCCEEEEEecCCcee
Confidence            3588999995    666654 67999999999999988887554432    22224467777888999999988755433


Q ss_pred             eeec---cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         93 AIFG---GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        93 ~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      ....   ....+...+....+.+++..+.+.  .+.+.++++...........                ...........
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~  260 (368)
T d1mdah_         199 AGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAI----------------DGNESGRKADN  260 (368)
T ss_dssp             CEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCC----------------CSSCTHHHHTT
T ss_pred             eeeeecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeec----------------ccccceeeeee
Confidence            2211   113445556677788887666544  45677777665443211100                00000000000


Q ss_pred             ccCcceeEEEEc--CCEEEEec---------CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348        170 IHRNYVDCVRWL--GDFVLSKS---------CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ  238 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  238 (291)
                      ........++++  ++.++...         ....|.+||..+++.            +..+... ..+.  .+.++|||
T Consensus       261 ~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~------------~~~~~~~-~~~~--~~a~spDG  325 (368)
T d1mdah_         261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT------------SGPISNG-HDSD--AIIAAQDG  325 (368)
T ss_dssp             EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE------------EECCEEE-EEEC--EEEECCSS
T ss_pred             ecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcE------------eEEecCC-Ccee--EEEECCCC
Confidence            001111223333  44443322         234689999988854            4444322 2233  35566778


Q ss_pred             c--EEEEEcCCCcEEEEEcCCCCC
Q psy10348        239 K--ILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       239 ~--~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      +  +++++..|+.|++||..+++.
T Consensus       326 ~~~ly~s~~~~~~v~v~D~~tgk~  349 (368)
T d1mdah_         326 ASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             SCEEEEEETTTTEEEEEESSSCEE
T ss_pred             CEEEEEEeCCCCeEEEEECCCCCE
Confidence            6  356777899999999999853

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.13  E-value=2.5e-08  Score=75.73  Aligned_cols=232  Identities=12%  Similarity=-0.003  Sum_probs=135.3

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec----CCeEEEEECCC
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK----DHTLRLWNIKT   88 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~i~vwd~~~   88 (291)
                      +..++|.+++    .++++-...+.|+.|+.++++....+.........+++.+ +++++++...    .+.+...+...
T Consensus        42 lEG~~~D~~G----~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~-dG~l~va~~~~~~~~~~i~~~~~~~  116 (319)
T d2dg1a1          42 LEGLNFDRQG----QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENG  116 (319)
T ss_dssp             EEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             cEeCEECCCC----CEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECC-CCCEEEEecCCCccceeEEEEcCCC
Confidence            3578888887    4888877889999999887766655555556778999999 8888776543    23455555554


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecC------CcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      +........ ..-......+++.++|++.++....      +.+..++....... .+                      
T Consensus       117 ~~~~~~~~~-~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~-~~----------------------  172 (319)
T d2dg1a1         117 DNLQDIIED-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PI----------------------  172 (319)
T ss_dssp             CSCEEEECS-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE-EE----------------------
T ss_pred             ceeeeeccC-CCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeE-EE----------------------
Confidence            444333311 1223457889999999866653221      12333332221110 00                      


Q ss_pred             cccccccccCcceeEEEEc--CCE-EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDF-VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                            ...-...+.++|+  ++. .++-+..+.|..|++..........   ............ ...  .++.+.+|+
T Consensus       173 ------~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~---~~~~~~~~~~~~-~Pd--Gl~vD~~G~  240 (319)
T d2dg1a1         173 ------IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF---GATIPYYFTGHE-GPD--SCCIDSDDN  240 (319)
T ss_dssp             ------EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE---EEEEEEECCSSS-EEE--EEEEBTTCC
T ss_pred             ------eeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccc---cceeeeccCCcc-cee--eeeEcCCCC
Confidence                  0012234678887  554 4555668899999876432210000   000011111111 112  356678899


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCCcceeEEEecc----ccccceeeeEEccCCceee
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP----RCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~  290 (291)
                      +.++....+.|.+||- .++.    +..+..+    ++...+++++|.+++..|+
T Consensus       241 l~Va~~~~g~V~~~~p-~G~~----l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~  290 (319)
T d2dg1a1         241 LYVAMYGQGRVLVFNK-RGYP----IGQILIPGRDEGHMLRSTHPQFIPGTNQLI  290 (319)
T ss_dssp             EEEEEETTTEEEEECT-TSCE----EEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred             EEEEEcCCCEEEEECC-CCcE----EEEEeCCCcCCCcCceeeeEEEeCCCCEEE
Confidence            8888888999999995 4542    2333332    3344678999999876653

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.07  E-value=2.2e-07  Score=68.44  Aligned_cols=200  Identities=12%  Similarity=0.085  Sum_probs=110.4

Q ss_pred             eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC---eEEEEECCCcceeeeeccccCCCCceEEEEEccC
Q psy10348         37 VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH---TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL  113 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~  113 (291)
                      .|.|.|.+ |...+.+..+...+..-+||| ||+.||-.....   .+.+.+...+.....    ..+........|+|+
T Consensus        20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSP-DGk~IAf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~spd   93 (269)
T d2hqsa1          20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQV----ASFPRHNGAPAFSPD   93 (269)
T ss_dssp             EEEEEETT-SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEE----ECCSSCEEEEEECTT
T ss_pred             EEEEEcCC-CCCcEEEecCCCceeeeEECC-CCCEEEEEEeeccCcceeeeecccCceeEE----eeeecccccceecCC
Confidence            57777866 444455555677888999999 889888654433   466667776555444    367788889999999


Q ss_pred             CCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEec
Q psy10348        114 GTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKS  189 (291)
Q Consensus       114 ~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~  189 (291)
                      |..++.... ++...++............                           ...........+.  ++ .+++..
T Consensus        94 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~  146 (269)
T d2hqsa1          94 GSKLAFALSKTGSLNLYVMDLASGQIRQV---------------------------TDGRSNNTEPTWFPDSQNLAFTSD  146 (269)
T ss_dssp             SSEEEEEECTTSSCEEEEEETTTCCEEEC---------------------------CCCSSCEEEEEECTTSSEEEEEEC
T ss_pred             CCeeeEeeecCCccceeecccccccceee---------------------------eeccccccccccccccccceeccc
Confidence            998877654 3443333332222110000                           0011112222233  33 444444


Q ss_pred             CCC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC-CcEEEEEcCCCCCCcceeE
Q psy10348        190 CEN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS-GRTYVWDLDVQDPSSIKFQ  266 (291)
Q Consensus       190 ~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~  266 (291)
                      .++  .|...++.....             ........  ......++|+++.++..+.+ +...+|........   ..
T Consensus       147 ~~g~~~i~~~~~~~~~~-------------~~~~~~~~--~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~---~~  208 (269)
T d2hqsa1         147 QAGRPQVYKVNINGGAP-------------QRITWEGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---VQ  208 (269)
T ss_dssp             TTSSCEEEEEETTSSCC-------------EECCCSSS--EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---EE
T ss_pred             ccCCceEeeeecccccc-------------eeeecccc--cccccccccccceeEEEeecCCceeeeEeeccccc---ce
Confidence            455  445555554432             11222222  23345667889988877644 44444444433211   12


Q ss_pred             EEeccccccceeeeEEccCCceee
Q psy10348        267 ILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       267 ~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      .+   ..........|||||++|+
T Consensus       209 ~~---~~~~~~~~p~~SPDG~~i~  229 (269)
T d2hqsa1         209 VL---SSTFLDETPSLAPNGTMVI  229 (269)
T ss_dssp             EC---CCSSSCEEEEECTTSSEEE
T ss_pred             Ee---ecCccccceEECCCCCEEE
Confidence            22   2234566789999999986

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=6.8e-07  Score=65.68  Aligned_cols=217  Identities=12%  Similarity=-0.006  Sum_probs=119.7

Q ss_pred             eeecceeEEEEeeeccCCCCCEEEEecCC---CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CCeEE
Q psy10348          7 LLIEENFYTCAWSMDLESGRPLLAVAGSR---AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTLR   82 (291)
Q Consensus         7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~   82 (291)
                      ....+.+..-+||||++    .||-....   ..+.+.+...+.. ..+..+.+......|+| ++..++.... ++...
T Consensus        35 ~~~~~~~~sP~wSPDGk----~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sp-dg~~i~~~~~~~~~~~  108 (269)
T d2hqsa1          35 HRSPQPLMSPAWSPDGS----KLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSP-DGSKLAFALSKTGSLN  108 (269)
T ss_dssp             EEESSCEEEEEECTTSS----EEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECT-TSSEEEEEECTTSSCE
T ss_pred             ecCCCceeeeEECCCCC----EEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecC-CCCeeeEeeecCCccc
Confidence            45667788899999995    77755332   3466667665554 34455678888999999 7777766543 33333


Q ss_pred             --EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEE--eccCchhhhhhccccccCCCCccccccC
Q psy10348         83 --LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLW--DLTKPEIKDACAESYTFNPARSTRPFDT  157 (291)
Q Consensus        83 --vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (291)
                        .+..........    ...........+++++..++. ...++...+|  ++..+.....                  
T Consensus       109 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~------------------  166 (269)
T d2hqsa1         109 LYVMDLASGQIRQV----TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRI------------------  166 (269)
T ss_dssp             EEEEETTTCCEEEC----CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEEC------------------
T ss_pred             eeecccccccceee----eeccccccccccccccccceecccccCCceEeeeecccccceee------------------
Confidence              333333333222    234445556667777765544 4445554444  4444332111                  


Q ss_pred             ccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEE--EecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348        158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCII--CWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF  232 (291)
Q Consensus       158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  232 (291)
                                 ...........|+  ++.++..+. .+...  +.+......             . .........  ..
T Consensus       167 -----------~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-------------~-~~~~~~~~~--~p  219 (269)
T d2hqsa1         167 -----------TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-------------Q-VLSSTFLDE--TP  219 (269)
T ss_dssp             -----------CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-------------E-ECCCSSSCE--EE
T ss_pred             -----------ecccccccccccccccceeEEEeecCCceeeeEeecccccc-------------e-EeecCcccc--ce
Confidence                       1133344555666  555554443 44444  444443321             1 111222222  24


Q ss_pred             EecCCCcEEEEEcC---CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        233 SMDYWQKILAVGNQ---SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       233 ~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      .++|||++|+-.+.   ...|+++++..+..     ..+  ....+.+...+|||-
T Consensus       220 ~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~-----~~l--t~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         220 SLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-----ARL--PATDGQVKFPAWSPY  268 (269)
T ss_dssp             EECTTSSEEEEEEEETTEEEEEEEETTSCCE-----EEC--CCSSSEEEEEEECCC
T ss_pred             EECCCCCEEEEEEcCCCCcEEEEEECCCCCE-----EEE--eCCCCcEEeEEeCCC
Confidence            56788999875553   34789999987642     122  233467888999984

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.03  E-value=8e-07  Score=67.03  Aligned_cols=244  Identities=11%  Similarity=0.055  Sum_probs=128.3

Q ss_pred             eeEEEEeeeccCCCCCEEEEecC-------CCeEEEEccCCcceeEEEeee----ccceeEEEEecCCCcEEEEeecCCe
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGS-------RAVIRIFSPAFHACVRHFYGH----GHAINELKFHPQDFNLLLSVSKDHT   80 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~   80 (291)
                      .....+|.++++    ++++...       +|+|..||..+++........    .+.-..++|.+ +++.++++.....
T Consensus        19 g~EGpa~d~dG~----ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~-dg~~l~vad~~~~   93 (314)
T d1pjxa_          19 GAEGPVFDKNGD----FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVADMRLG   93 (314)
T ss_dssp             TCEEEEECTTSC----EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEETTTE
T ss_pred             CCeEeEEeCCCC----EEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeC-CCCEEEEEECCCe
Confidence            446778988884    6665432       467999998877654333211    12356799999 8887777777777


Q ss_pred             EEEEECCCcceeeeeccccCC-CCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGH-RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      |...+...+..........+. -.....+++.++|++.++-.. +....++...... ........+.+++...      
T Consensus        94 i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~-~~~~~~~~~~~~~-~~~G~v~~~~~dg~~~------  165 (314)
T d1pjxa_          94 LLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA-GEVAPADYTRSMQ-EKFGSIYCFTTDGQMI------  165 (314)
T ss_dssp             EEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB-CBCTTSCCCBTTS-SSCEEEEEECTTSCEE------
T ss_pred             EEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCc-cCcccccccceec-cCCceEEEEeecCcee------
Confidence            888887754322221110111 113577889999987666422 1111111000000 0000000001111000      


Q ss_pred             ccCcccccccccCcceeEEEEc--CC-----EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-ccEEEEE
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GD-----FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEIWFIR  231 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~  231 (291)
                             ........-+.++|+  ++     ++++-+..+.|..||+.......      ..+....+.... ....  .
T Consensus       166 -------~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~------~~~~~~~~~~~~~~~pd--G  230 (314)
T d1pjxa_         166 -------QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE------NKKVWGHIPGTHEGGAD--G  230 (314)
T ss_dssp             -------EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE------EEEEEEECCCCSSCEEE--E
T ss_pred             -------EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccc------eeeEEEEccccccccce--e
Confidence                   000011223466675  22     44555678888888875432210      001122222211 1122  3


Q ss_pred             EEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348        232 FSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL  289 (291)
Q Consensus       232 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l  289 (291)
                      ++.+.+|++.++....+.|.+||...++..    ..+..+  ...+++++|.||++.|
T Consensus       231 iavD~~GnlyVa~~~~g~I~~~dp~~g~~~----~~i~~p--~~~~t~~afg~d~~~l  282 (314)
T d1pjxa_         231 MDFDEDNNLLVANWGSSHIEVFGPDGGQPK----MRIRCP--FEKPSNLHFKPQTKTI  282 (314)
T ss_dssp             EEEBTTCCEEEEEETTTEEEEECTTCBSCS----EEEECS--SSCEEEEEECTTSSEE
T ss_pred             eEEecCCcEEEEEcCCCEEEEEeCCCCEEE----EEEECC--CCCEEEEEEeCCCCEE
Confidence            556777998888778899999998876432    333322  2467899999999755

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.98  E-value=1.5e-07  Score=70.79  Aligned_cols=204  Identities=10%  Similarity=-0.011  Sum_probs=122.5

Q ss_pred             cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348         46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS  125 (291)
Q Consensus        46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  125 (291)
                      .+.+..+.. ...+..+++.| +|+++++...+++|..|+.. ++.. .+   ......+.+++|+++|+++++...++.
T Consensus        18 ~~v~~~~p~-~~~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~-g~~~-~~---~~~~~~~~gla~~~dG~l~v~~~~~~~   90 (302)
T d2p4oa1          18 AKIITSFPV-NTFLENLASAP-DGTIFVTNHEVGEIVSITPD-GNQQ-IH---ATVEGKVSGLAFTSNGDLVATGWNADS   90 (302)
T ss_dssp             EEEEEEECT-TCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEE-EE---EECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred             ccEEEECCC-CCCcCCEEECC-CCCEEEEeCCCCEEEEEeCC-CCEE-EE---EcCCCCcceEEEcCCCCeEEEecCCce
Confidence            344444432 23578899999 99999999999999988865 3332 33   355678999999999998888888888


Q ss_pred             EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC
Q psy10348        126 LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE  203 (291)
Q Consensus       126 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~  203 (291)
                      +..++............                         ..........+.+.  ++++++.+.++.+..+|.....
T Consensus        91 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~  145 (302)
T d2p4oa1          91 IPVVSLVKSDGTVETLL-------------------------TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS  145 (302)
T ss_dssp             CEEEEEECTTSCEEEEE-------------------------ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred             EEEEEecccccceeecc-------------------------ccCCccccceeEEccCCCEEeeccccccceeeeccCCc
Confidence            98888765432111000                         00123346677776  6677777778888888877653


Q ss_pred             ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348        204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS  283 (291)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  283 (291)
                      .........    ...............+.++. +.++++.+..+.|..++............ ..   .......++|+
T Consensus       146 ~~~~~~~~~----~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~pdgia~d  216 (302)
T d2p4oa1         146 GSIWLEHPM----LARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEI-FV---EQTNIDDFAFD  216 (302)
T ss_dssp             EEEEEECGG----GSCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEE-EE---ESCCCSSEEEB
T ss_pred             ceeEecCCc----cceeeccCcccccccccccC-CceeeecCCCCeEEecccccccccccccc-cc---CCCCCcceEEC
Confidence            210000000    00000111111122334442 45556667888999999876543322212 11   12356779999


Q ss_pred             cCCceee
Q psy10348        284 KNGNVLL  290 (291)
Q Consensus       284 ~~g~~l~  290 (291)
                      ++|++.+
T Consensus       217 ~dG~l~v  223 (302)
T d2p4oa1         217 VEGNLYG  223 (302)
T ss_dssp             TTCCEEE
T ss_pred             CCCCEEE
Confidence            9998765

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.88  E-value=2.8e-07  Score=67.66  Aligned_cols=194  Identities=7%  Similarity=-0.081  Sum_probs=119.7

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      ....+++++++    .++++....+.+++++..++..+..... ......+++.+ +++++++-..+..+..++......
T Consensus        58 ~p~gvav~~~g----~i~v~d~~~~~i~~~~~~~~~~~~~~~~-~~~p~~iavd~-~g~i~v~d~~~~~~~~~~~~~~~~  131 (260)
T d1rwia_          58 QPQGLAVDGAG----TVYVTDFNNRVVTLAAGSNNQTVLPFDG-LNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQ  131 (260)
T ss_dssp             SCCCEEECTTC----CEEEEETTTEEEEECTTCSCCEECCCCS-CCSEEEEEECT-TCCEEEEEGGGTEEEEECTTCSSC
T ss_pred             CceEEEEcCCC----CEEEeeeeeceeeeeeeccceeeeeeee-eeecccccccc-cceeEeecccccccccccccccee
Confidence            34567777776    4777777777777777655554433322 24568899999 878887766677787777654332


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH  171 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (291)
                      ....   .........++++++++.+++...++.|..+|..........                            ...
T Consensus       132 ~~~~---~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~----------------------------~~~  180 (260)
T d1rwia_         132 TVLP---FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP----------------------------FTD  180 (260)
T ss_dssp             EECC---CCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC----------------------------CSS
T ss_pred             eeee---ecccCCcceeeecCCCCEeeeccccccccccccccceeeeee----------------------------ccc
Confidence            2211   122345578999999998888888888999987654322110                            012


Q ss_pred             CcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCc
Q psy10348        172 RNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR  249 (291)
Q Consensus       172 ~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~  249 (291)
                      ......++++  ++++++....+.|..++.......           +..... -..  ...++++++|.++++-..+++
T Consensus       181 ~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~-----------~~~~~~-~~~--P~~i~~d~~g~l~vad~~~~r  246 (260)
T d1rwia_         181 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-----------VLPFTG-LNT--PLAVAVDSDRTVYVADRGNDR  246 (260)
T ss_dssp             CCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCE-----------ECCCCS-CCC--EEEEEECTTCCEEEEEGGGTE
T ss_pred             cCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEE-----------EEccCC-CCC--eEEEEEeCCCCEEEEECCCCE
Confidence            2335678886  667777777888888876554321           111111 111  224556677887777666676


Q ss_pred             EEEEEcC
Q psy10348        250 TYVWDLD  256 (291)
Q Consensus       250 i~vwd~~  256 (291)
                      |+.++..
T Consensus       247 I~~i~~~  253 (260)
T d1rwia_         247 VVKLTSL  253 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEEeCC
Confidence            6655443

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.83  E-value=2.2e-06  Score=63.44  Aligned_cols=184  Identities=12%  Similarity=0.109  Sum_probs=116.7

Q ss_pred             ecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEE
Q psy10348         32 AGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADF  110 (291)
Q Consensus        32 ~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~  110 (291)
                      .+.++.|.+++. .++....+. ........+++.+ ++.++++....+.+.+++.. ++.+..+.. ..+......+++
T Consensus        89 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~-~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~-~~~~~~~~~i~~  164 (279)
T d1q7fa_          89 RSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGC-SKHLEFPNGVVV  164 (279)
T ss_dssp             CGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEEC-TTTCSSEEEEEE
T ss_pred             cCCccccccccc-cccceeecCCCcccccceecccc-CCcEEEEeeccceeeEeccC-Cceeecccc-cccccccceeee
Confidence            345567777775 466555553 2234567888888 88888887777888888865 666665532 346677889999


Q ss_pred             ccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe
Q psy10348        111 DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK  188 (291)
Q Consensus       111 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  188 (291)
                      .++++.+++....+.|++||... +.+..+..                          .+.......++++  |+++++-
T Consensus       165 d~~g~i~v~d~~~~~V~~~d~~G-~~~~~~g~--------------------------~g~~~~P~giavD~~G~i~Vad  217 (279)
T d1q7fa_         165 NDKQEIFISDNRAHCVKVFNYEG-QYLRQIGG--------------------------EGITNYPIGVGINSNGEILIAD  217 (279)
T ss_dssp             CSSSEEEEEEGGGTEEEEEETTC-CEEEEESC--------------------------TTTSCSEEEEEECTTCCEEEEE
T ss_pred             ccceeEEeeeccccceeeeecCC-ceeeeecc--------------------------cccccCCcccccccCCeEEEEE
Confidence            99998888888889999999654 32222210                          1123345678886  6666664


Q ss_pred             cC-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        189 SC-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       189 ~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      .. ++.|.+|+.. ++.            +..+...........++.+|+|.+++ ++.++.|++|......+
T Consensus       218 ~~~~~~v~~f~~~-G~~------------~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~~  276 (279)
T d1q7fa_         218 NHNNFNLTIFTQD-GQL------------ISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLAP  276 (279)
T ss_dssp             CSSSCEEEEECTT-SCE------------EEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCCC
T ss_pred             CCCCcEEEEECCC-CCE------------EEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeecC
Confidence            43 4579999853 322            33332221111122344557787555 55788999999887654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.79  E-value=2.9e-06  Score=63.91  Aligned_cols=201  Identities=10%  Similarity=0.037  Sum_probs=115.4

Q ss_pred             eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec----cceeEEEEecCCCcEEEEeec-----------
Q psy10348         13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG----HAINELKFHPQDFNLLLSVSK-----------   77 (291)
Q Consensus        13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~~-----------   77 (291)
                      -..++|.++++    .++++...+.|...+.+.+..........    ...+.+++.+ ++.+.++-..           
T Consensus        73 P~Gl~~~~dg~----~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~-~G~lyvtd~~~~~~~~~~~~~  147 (314)
T d1pjxa_          73 PAGCQCDRDAN----QLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRS  147 (314)
T ss_dssp             EEEEEECSSSS----EEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBT
T ss_pred             ceeEEEeCCCC----EEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECC-CCCEEEecCccCcccccccce
Confidence            34688888874    77777666778888876543221111111    1357799999 8888777422           


Q ss_pred             ----CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCC----EE-EEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348         78 ----DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT----KI-MSCGMDHSLKLWDLTKPEIKDACAESYTFNP  148 (291)
Q Consensus        78 ----dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~  148 (291)
                          +|.|..++.. ++.....    ..-...+.++|+|++.    .| ++-+..+.|..||+.....+........+  
T Consensus       148 ~~~~~G~v~~~~~d-g~~~~~~----~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~--  220 (314)
T d1pjxa_         148 MQEKFGSIYCFTTD-GQMIQVD----TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI--  220 (314)
T ss_dssp             TSSSCEEEEEECTT-SCEEEEE----EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC--
T ss_pred             eccCCceEEEEeec-CceeEee----CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEc--
Confidence                2344444433 3333332    2223346789998764    34 44466788998887643322110000000  


Q ss_pred             CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348        149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE  226 (291)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
                                         ..........++++  |++.++....+.|.+||......            +..+..+...
T Consensus       221 -------------------~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~------------~~~i~~p~~~  269 (314)
T d1pjxa_         221 -------------------PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP------------KMRIRCPFEK  269 (314)
T ss_dssp             -------------------CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC------------SEEEECSSSC
T ss_pred             -------------------cccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEE------------EEEEECCCCC
Confidence                               00122234577886  77777777789999999876543            3333333334


Q ss_pred             EEEEEEEecCCCcEE-EEEcCCCcEEEEEcCCC
Q psy10348        227 IWFIRFSMDYWQKIL-AVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       227 i~~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~  258 (291)
                      ...++  +.|+++.| ++.+.+|.|..+++...
T Consensus       270 ~t~~a--fg~d~~~lyVt~~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         270 PSNLH--FKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEEEE--ECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEEE--EeCCCCEEEEEECCCCcEEEEECCCC
Confidence            44444  46778744 55667788888887643

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=2.2e-07  Score=74.18  Aligned_cols=114  Identities=11%  Similarity=0.080  Sum_probs=78.2

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee---ccceeEEEEecCCCcEEEEee---------cCCeEEE
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH---GHAINELKFHPQDFNLLLSVS---------KDHTLRL   83 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~---------~dg~i~v   83 (291)
                      ..|.+++    .++. -..+|.|.+||+.+++....+...   .-.+....|+| |+++++...         ..+.+.+
T Consensus        22 ~~W~~~~----~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Sp-D~~~vl~~~~~~~~~r~s~~~~~~i   95 (465)
T d1xfda1          22 AKWISDT----EFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVL   95 (465)
T ss_dssp             CCBSSSS----CBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             CEEeCCC----cEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECC-CCCeEEEEEcccceeEeeccccEEE
Confidence            3576665    3544 456789999999988764444332   23567788999 888877653         3577899


Q ss_pred             EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348         84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK  137 (291)
Q Consensus        84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~  137 (291)
                      +|+.++...... ........+....|||+|+.+|... ++.|.+.+..++..+
T Consensus        96 ~d~~~~~~~~l~-~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~  147 (465)
T d1xfda1          96 SKIPHGDPQSLD-PPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAI  147 (465)
T ss_dssp             EESSSCCCEECC-CTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCE
T ss_pred             EEccCCceeecc-CccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceE
Confidence            999987754432 1133445566788999999998876 677888887665543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.62  E-value=9.2e-06  Score=62.47  Aligned_cols=164  Identities=8%  Similarity=0.019  Sum_probs=95.8

Q ss_pred             eeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCCc-cee--EEEe--eeccceeEEEEecCCCcEEEEe-ecCCeEEEE
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAFH-ACV--RHFY--GHGHAINELKFHPQDFNLLLSV-SKDHTLRLW   84 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~~-~~~--~~~~--~~~~~v~~~~~~~~~~~~l~s~-~~dg~i~vw   84 (291)
                      .+.+++|+|++.    +++++. ....|.+|+.... ...  ..+.  ........++|+| +++++++. -.+++|.+|
T Consensus       146 h~h~v~~sPdG~----~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~p-dg~~~yv~~e~~~~V~v~  220 (365)
T d1jofa_         146 GIHGMVFDPTET----YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEY  220 (365)
T ss_dssp             CEEEEEECTTSS----EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEE
T ss_pred             cceEEEECCCCC----EEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECC-CCceEEEeccCCCEEEEE
Confidence            467999999994    666654 4568888876543 222  1221  1235678899999 77776554 457889999


Q ss_pred             ECCCcceeee--ecc--------------ccCCCCceEEEEEccCCCEEEEEec-C-----CcEEEEeccCchhhhhhcc
Q psy10348         85 NIKTDICIAI--FGG--------------VEGHRDEVLSADFDLLGTKIMSCGM-D-----HSLKLWDLTKPEIKDACAE  142 (291)
Q Consensus        85 d~~~~~~~~~--~~~--------------~~~~~~~i~~~~~~~~~~~l~~~~~-d-----~~i~v~d~~~~~~~~~~~~  142 (291)
                      ++..+.....  ...              ...+......+.++|+|++|+++.. +     +.|..|++.....+.....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~  300 (365)
T d1jofa_         221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF  300 (365)
T ss_dssp             EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE
T ss_pred             EecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeE
Confidence            9876543211  100              0122334667899999999888743 2     2366677654322211100


Q ss_pred             ccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEe-cCCCeEEEecCCCC
Q psy10348        143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSK-SCENCIICWKPGRL  202 (291)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~-~~d~~i~iwd~~~~  202 (291)
                                            +............++++   |++|+++ ..++.|.+|+++..
T Consensus       301 ----------------------~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         301 ----------------------LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             ----------------------EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ----------------------eeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence                                  00000012234556664   6666555 56899999987543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.52  E-value=3.5e-05  Score=56.43  Aligned_cols=98  Identities=17%  Similarity=0.043  Sum_probs=64.6

Q ss_pred             Eeeec--cCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-C-----CeEEEEECCC
Q psy10348         17 AWSMD--LESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-D-----HTLRLWNIKT   88 (291)
Q Consensus        17 ~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-d-----g~i~vwd~~~   88 (291)
                      ..||+  ++    .+|-.+ +|.|.+.|+.+++.. .+..+.+.+...+|+| ||+.||-... +     ..|.+++...
T Consensus         5 ~~sPdi~G~----~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~i~~~~~~~   77 (281)
T d1k32a2           5 LLNPDIHGD----RIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFP-DGRKIAIRVMRGSSLNTADLYFYNGEN   77 (281)
T ss_dssp             CEEEEEETT----EEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECT-TSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred             ccCCCCCCC----EEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECC-CCCEEEEEEeeCCCCCceEEEEEEecC
Confidence            45788  74    555443 467888899877754 5666677889999999 8888875432 2     2477778777


Q ss_pred             cceeeeecc---ccCCCCceEEEEEccCCCEEEEEe
Q psy10348         89 DICIAIFGG---VEGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        89 ~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      ++.......   ............|+|+|+.|+...
T Consensus        78 g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          78 GEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             TEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             CceEEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence            765543210   011223456788999999888754

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.48  E-value=8.9e-05  Score=54.98  Aligned_cols=225  Identities=9%  Similarity=-0.054  Sum_probs=133.8

Q ss_pred             EEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeee
Q psy10348         15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAI   94 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~   94 (291)
                      +..|.+...   .++.+--..+.|..||.++++.. .+. ....+.++++.+ ++.++++ +.+ .+.++|..+++....
T Consensus        22 gp~wd~~~~---~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~-dg~l~va-~~~-gl~~~d~~tg~~~~l   93 (295)
T d2ghsa1          22 GPTFDPASG---TAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIA-SDD-GLFLRDTATGVLTLH   93 (295)
T ss_dssp             EEEEETTTT---EEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEE-ETT-EEEEEETTTCCEEEE
T ss_pred             CCeEECCCC---EEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEec-CCCEEEE-EeC-ccEEeecccceeeEE
Confidence            456776543   46666567789999999887643 333 346788999988 7777765 444 588999998875443


Q ss_pred             eccc-cCCCCceEEEEEccCCCEEEEEec----CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         95 FGGV-EGHRDEVLSADFDLLGTKIMSCGM----DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        95 ~~~~-~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      .... ......++.+.+.|+|++.++...    .+.-.+|.+..++......                            
T Consensus        94 ~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~----------------------------  145 (295)
T d2ghsa1          94 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA----------------------------  145 (295)
T ss_dssp             ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE----------------------------
T ss_pred             eeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee----------------------------
Confidence            2110 112346889999999987666543    2344566665554322111                            


Q ss_pred             ccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348        170 IHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ  246 (291)
Q Consensus       170 ~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~  246 (291)
                       ....-+.++|+  ++ ++++-+..+.|..+++..........    ................  ++.+.+|++.++.-.
T Consensus       146 -~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~----~~~~~~~~~~~g~pdG--~~vD~~GnlWva~~~  218 (295)
T d2ghsa1         146 -DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK----AEVFIDSTGIKGGMDG--SVCDAEGHIWNARWG  218 (295)
T ss_dssp             -EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC----CEEEEECTTSSSEEEE--EEECTTSCEEEEEET
T ss_pred             -ccCCcceeeecCCCceEEEeecccceeeEeeecccccccccc----eEEEeccCcccccccc--eEEcCCCCEEeeeeC
Confidence             11224567777  44 55666678889888875332111000    0112222233333333  455777988777777


Q ss_pred             CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc-cCCcee
Q psy10348        247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS-KNGNVL  289 (291)
Q Consensus       247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l  289 (291)
                      .+.|..||-. ++    ....+..+.  ..+++++|- ||.+.|
T Consensus       219 ~g~V~~~dp~-G~----~~~~i~lP~--~~~T~~~FGG~d~~~L  255 (295)
T d2ghsa1         219 EGAVDRYDTD-GN----HIARYEVPG--KQTTCPAFIGPDASRL  255 (295)
T ss_dssp             TTEEEEECTT-CC----EEEEEECSC--SBEEEEEEESTTSCEE
T ss_pred             CCceEEecCC-Cc----EeeEecCCC--CceEEEEEeCCCCCEE
Confidence            8899999954 43    334444432  368899995 676655

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.3e-06  Score=66.50  Aligned_cols=73  Identities=14%  Similarity=0.190  Sum_probs=51.2

Q ss_pred             EEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe---------cCCcEEEEecc
Q psy10348         62 LKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG---------MDHSLKLWDLT  132 (291)
Q Consensus        62 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---------~d~~i~v~d~~  132 (291)
                      ..|.+ ++.++.. ..+|.|.+||+.+++....+.........+....|+||+++++.+.         ..+.+.++|+.
T Consensus        22 ~~W~~-~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~   99 (465)
T d1xfda1          22 AKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP   99 (465)
T ss_dssp             CCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred             CEEeC-CCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEcc
Confidence            35887 6666554 5678899999998876554432122334667788999999887764         34678899998


Q ss_pred             Cchh
Q psy10348        133 KPEI  136 (291)
Q Consensus       133 ~~~~  136 (291)
                      ++..
T Consensus       100 ~~~~  103 (465)
T d1xfda1         100 HGDP  103 (465)
T ss_dssp             SCCC
T ss_pred             CCce
Confidence            8764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.34  E-value=0.00024  Score=53.27  Aligned_cols=62  Identities=15%  Similarity=0.053  Sum_probs=47.7

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM  122 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  122 (291)
                      ..+..++|.+ ++++.++-..+++|..|+...+.....+   .........++++++|+++++...
T Consensus        40 ~~lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g~~~~~~~---~~~~~~p~gla~~~dG~l~va~~~  101 (319)
T d2dg1a1          40 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPF---VSHKANPAAIKIHKDGRLFVCYLG  101 (319)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEE---ECSSSSEEEEEECTTSCEEEEECT
T ss_pred             cCcEeCEECC-CCCEEEEECCCCEEEEEECCCCeEEEEE---eCCCCCeeEEEECCCCCEEEEecC
Confidence            4457899999 8888888778899999998876655554   345567889999999987776543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.18  E-value=0.00053  Score=50.67  Aligned_cols=191  Identities=14%  Similarity=-0.034  Sum_probs=114.0

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee----eccceeEEEEecCCCcEEEEeecC----Ce
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG----HGHAINELKFHPQDFNLLLSVSKD----HT   80 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~~d----g~   80 (291)
                      ....+.++++.+++     .|+.++.+ .+.++|..+++.......    ....++.+.+.| +|++.++...+    +.
T Consensus        57 ~~~~~~~i~~~~dg-----~l~va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~-~G~iw~~~~~~~~~~~~  129 (295)
T d2ghsa1          57 LPFMGSALAKISDS-----KQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGA  129 (295)
T ss_dssp             CSSCEEEEEEEETT-----EEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTC
T ss_pred             CCCCcEEEEEecCC-----CEEEEEeC-ccEEeecccceeeEEeeeecCCCcccceeeEECC-CCCEEEEeccccccccc
Confidence            35677888888887     34444554 588999998875433221    123578889999 88877765322    34


Q ss_pred             EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348         81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK  159 (291)
Q Consensus        81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (291)
                      -.+|.+..++.....    ..-.....++|+++++.++.+ +..+.|..|++........-..                 
T Consensus       130 g~l~~~~~g~~~~~~----~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~-----------------  188 (295)
T d2ghsa1         130 GSIYHVAKGKVTKLF----ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA-----------------  188 (295)
T ss_dssp             EEEEEEETTEEEEEE----EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC-----------------
T ss_pred             eeEeeecCCcEEEEe----eccCCcceeeecCCCceEEEeecccceeeEeeecccccccccce-----------------
Confidence            566776666655444    222345789999999866544 5578888888754321110000                 


Q ss_pred             ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348        160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  237 (291)
                         ..+............++++  |++.++.-..+.|..||.. ++            .+..+......++.++|.- +|
T Consensus       189 ---~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~-G~------------~~~~i~lP~~~~T~~~FGG-~d  251 (295)
T d2ghsa1         189 ---EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN------------HIARYEVPGKQTTCPAFIG-PD  251 (295)
T ss_dssp             ---EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC------------EEEEEECSCSBEEEEEEES-TT
T ss_pred             ---EEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC-Cc------------EeeEecCCCCceEEEEEeC-CC
Confidence               0000111123446677776  6666666667899999964 42            3566666555666666652 45


Q ss_pred             CcEEEEE
Q psy10348        238 QKILAVG  244 (291)
Q Consensus       238 ~~~l~~~  244 (291)
                      .+.|++.
T Consensus       252 ~~~LyvT  258 (295)
T d2ghsa1         252 ASRLLVT  258 (295)
T ss_dssp             SCEEEEE
T ss_pred             CCEEEEE
Confidence            5555443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.85  E-value=0.0017  Score=49.64  Aligned_cols=265  Identities=10%  Similarity=0.074  Sum_probs=133.3

Q ss_pred             EEEeeeccCCCCCEEEEec-CCCeEEEEccCCcceeEEEee-eccceeEEEEecC-CCcEEEEeecC-------------
Q psy10348         15 TCAWSMDLESGRPLLAVAG-SRAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQ-DFNLLLSVSKD-------------   78 (291)
Q Consensus        15 ~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~l~s~~~d-------------   78 (291)
                      .+++. +++.||+++++.. .++.|.+.|+++.+..+.+.- ....+..+...+. +..+++.++.+             
T Consensus        89 ~~S~T-dGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d  167 (459)
T d1fwxa2          89 HMSFT-EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED  167 (459)
T ss_dssp             EEEEE-TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred             ccccc-CCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccc
Confidence            34443 3344556777765 678999999999887665542 2334555555431 34566665542             


Q ss_pred             -----CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC---------------cEEEEeccCchhhh
Q psy10348         79 -----HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH---------------SLKLWDLTKPEIKD  138 (291)
Q Consensus        79 -----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------~i~v~d~~~~~~~~  138 (291)
                           +.+.+.|..+.+....+    .-......+.++++|+++++.+.+.               .+.+++....+...
T Consensus       168 ~~~y~~~~t~ID~~tm~V~~QV----~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av  243 (459)
T d1fwxa2         168 VANYVNVFTAVDADKWEVAWQV----LVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI  243 (459)
T ss_dssp             GG-EEEEEEEEETTTTEEEEEE----EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred             hhhcceEEEEEecCCceEEEEe----eeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhh
Confidence                 23567888887766655    2234566899999999988877532               13333332111100


Q ss_pred             hhccccccCCCCccccccCccc-cCcccccccccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCCCccccccCCCce
Q psy10348        139 ACAESYTFNPARSTRPFDTQKE-HFPQFSTRDIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRLEDKELRTNETNV  214 (291)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~  214 (291)
                      .-. .....  .....+..... ......... -......+..+  |++++++ ..+.++.++|++..........+...
T Consensus       244 ~~G-k~~ei--ngV~VVD~~~~~~~~v~~yIP-VpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~  319 (459)
T d1fwxa2         244 AAG-DYQEL--NGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS  319 (459)
T ss_dssp             HHT-CSEEE--TTEEEEECSGG--CSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGG
T ss_pred             hcC-CcEEe--CCceeecccccCCcceeEEEe-cCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccc
Confidence            000 00000  00000000000 000000000 01113345555  6665554 45999999998754332111111111


Q ss_pred             eeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC------CCCcceeEEEe---ccccccceeeeEEccC
Q psy10348        215 TIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ------DPSSIKFQILS---HPRCMSAVRQTTLSKN  285 (291)
Q Consensus       215 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~---~~~~~~~v~~~~~s~~  285 (291)
                      ....+....-+   -+.-.++.+|.-..+---|..|--|++...      +........+.   ..+|.....+-...||
T Consensus       320 ~~~~e~elglg---PLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~d  396 (459)
T d1fwxa2         320 AVVAEPELGLG---PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT  396 (459)
T ss_dssp             GEEECCBCCSC---EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC
T ss_pred             cEEeecccCcC---ccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCC
Confidence            11222222222   233456666765566668999999998532      22222222221   2355555555567899


Q ss_pred             CceeeC
Q psy10348        286 GNVLLC  291 (291)
Q Consensus       286 g~~l~s  291 (291)
                      |++|++
T Consensus       397 gk~l~~  402 (459)
T d1fwxa2         397 NDWLVC  402 (459)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            999874

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.84  E-value=0.0023  Score=46.29  Aligned_cols=69  Identities=22%  Similarity=0.182  Sum_probs=48.9

Q ss_pred             EEecCC--CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC-----cEEEEeccCc
Q psy10348         63 KFHPQD--FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH-----SLKLWDLTKP  134 (291)
Q Consensus        63 ~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~-----~i~v~d~~~~  134 (291)
                      ..+| +  |+.++-.+ +|.|.+.|+..++..+ +   ..+...+...+|||||+.|+.... ++     .|.+++..++
T Consensus         5 ~~sP-di~G~~v~f~~-~~dl~~~d~~~g~~~~-L---t~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g   78 (281)
T d1k32a2           5 LLNP-DIHGDRIIFVC-CDDLWEHDLKSGSTRK-I---VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG   78 (281)
T ss_dssp             CEEE-EEETTEEEEEE-TTEEEEEETTTCCEEE-E---ECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred             ccCC-CCCCCEEEEEe-CCcEEEEECCCCCEEE-E---ecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC
Confidence            3567 6  77777654 5678888999877654 3   366778899999999998886543 22     3677777666


Q ss_pred             hhh
Q psy10348        135 EIK  137 (291)
Q Consensus       135 ~~~  137 (291)
                      +..
T Consensus        79 ~~~   81 (281)
T d1k32a2          79 EIK   81 (281)
T ss_dssp             EEE
T ss_pred             ceE
Confidence            544

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.68  E-value=0.0059  Score=46.52  Aligned_cols=106  Identities=11%  Similarity=0.075  Sum_probs=68.3

Q ss_pred             CEEEEecCC-----C------eEEEEccCCcceeE--EEe-eeccceeEEEEecCCCcEEEEeecC-CeEEEEECCCcce
Q psy10348         27 PLLAVAGSR-----A------VIRIFSPAFHACVR--HFY-GHGHAINELKFHPQDFNLLLSVSKD-HTLRLWNIKTDIC   91 (291)
Q Consensus        27 ~~l~~~~~d-----g------~i~vw~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~   91 (291)
                      ++++.|+.+     +      .+.+||..+++-..  ... .|.......++.+ ++.+++.|+.+ ..+.+||..+...
T Consensus        32 kv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~i~v~Gg~~~~~~~~yd~~~~~w  110 (387)
T d1k3ia3          32 RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSW  110 (387)
T ss_dssp             EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred             EEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEec-CCcEEEeecCCCcceeEecCccCcc
Confidence            577777742     1      37799998875432  222 2333345667888 88999988765 5799999987665


Q ss_pred             eeeeccccCCCCceEEEEEccCCCEEEEEecC------CcEEEEeccCch
Q psy10348         92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD------HSLKLWDLTKPE  135 (291)
Q Consensus        92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~  135 (291)
                      .. ...+.... .-..++..++|+.++.++.+      ..+.+||..+.+
T Consensus       111 ~~-~~~~~~~r-~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         111 IP-GPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             EE-CCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             cc-cccccccc-cccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            43 22212222 22456667899988888753      358899988765

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=0.0094  Score=42.87  Aligned_cols=221  Identities=8%  Similarity=-0.004  Sum_probs=123.8

Q ss_pred             ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348          9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT   88 (291)
Q Consensus         9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~   88 (291)
                      +...+.+++|.+..+   .++.+-..++.|+..+++.+.....+......+..+++....+.+..+-...+.|.+.++..
T Consensus        34 ~~~~~~~ld~D~~~~---~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg  110 (263)
T d1npea_          34 PAKVIIGLAFDCVDK---VVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (263)
T ss_dssp             EEEEEEEEEEETTTT---EEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCCcEEEEEEEeCCC---EEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCC
Confidence            344567788887664   34444456688998888765544444333356788999874555555656678999999875


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEecC-CcEEEE--eccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-HSLKLW--DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ......+   ......+..++++|...+++..... +..+|+  ++...... .+.                        
T Consensus       111 ~~~~~l~---~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~-~i~------------------------  162 (263)
T d1npea_         111 TQRRVLF---DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-ILA------------------------  162 (263)
T ss_dssp             CSCEEEE---CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-EEE------------------------
T ss_pred             ceEEEEe---cccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce-eee------------------------
Confidence            5443333   2334568899999988777655432 233444  44322211 110                        


Q ss_pred             ccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE-
Q psy10348        166 STRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL-  241 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l-  241 (291)
                         ...-.....++++  ++.| .+-...+.|...++.....          ..+  +.+...+ ..  ++..  +.+| 
T Consensus       163 ---~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~----------~~v--~~~~~~P-~~--lav~--~~~lY  222 (263)
T d1npea_         163 ---QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR----------RKV--LEGLQYP-FA--VTSY--GKNLY  222 (263)
T ss_dssp             ---CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE----------EEE--EECCCSE-EE--EEEE--TTEEE
T ss_pred             ---eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCe----------EEE--ECCCCCc-EE--EEEE--CCEEE
Confidence               0012234677776  5555 4445678888888865432          111  1222222 23  3443  4445 


Q ss_pred             EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348        242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN  285 (291)
Q Consensus       242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  285 (291)
                      .+-...+.|...|..+++.    ...+. +.......+++..++
T Consensus       223 wtd~~~~~I~~~~~~~g~~----~~~~~-~~~~~~~~gi~v~~~  261 (263)
T d1npea_         223 YTDWKTNSVIAMDLAISKE----MDTFH-PHKQTRLYGITIALS  261 (263)
T ss_dssp             EEETTTTEEEEEETTTTEE----EEEEC-CSSCCCCCCEEEECS
T ss_pred             EEECCCCEEEEEECCCCcc----ceEEC-CCCCCCcceEEEeCC
Confidence            4445678899999988742    12222 122334556666554

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.34  E-value=0.013  Score=42.31  Aligned_cols=204  Identities=9%  Similarity=0.113  Sum_probs=116.8

Q ss_pred             EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-ceeee
Q psy10348         16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAI   94 (291)
Q Consensus        16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~   94 (291)
                      ...+|..    +.||.-+ ..++.++|+++.+.++.+.- .++|.-=.|-. + +.|+-.. +..|+-|+++.. .+.+.
T Consensus        68 AIMhP~~----~IiALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis-~-~~L~lVT-~taVYHW~~~g~s~P~k~  138 (327)
T d1utca2          68 AIMNPAS----KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-L-NTVALVT-DNAVYHWSMEGESQPVKM  138 (327)
T ss_dssp             EEECSSS----SEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEESS-S-SEEEEEC-SSEEEEEESSSSCCCEEE
T ss_pred             hhcCCCC----cEEEEec-CCeEEEEehhHhhhhceEEc-CCCcEEEEecC-C-CEEEEEc-CCceEEEcccCCCCchhh
Confidence            3455665    5777766 45899999999998888763 45777778875 3 5555554 457999999543 45555


Q ss_pred             ecccc-CCCCceEEEEEccCCCEEEEEec-------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348         95 FGGVE-GHRDEVLSADFDLLGTKIMSCGM-------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS  166 (291)
Q Consensus        95 ~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (291)
                      +.... -....|..-..+++.++++..+-       .|.+.+|..+.....                             
T Consensus       139 fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ-----------------------------  189 (327)
T d1utca2         139 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-----------------------------  189 (327)
T ss_dssp             EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-----------------------------
T ss_pred             hhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCc-----------------------------
Confidence            52111 01346777778888887665432       456777776654311                             


Q ss_pred             cccccCcceeEEEEcCC-----EEEE---ecCCCeEEEecCCCCCccccccCCCceeeeee-ecCCcccEEEEEEEecCC
Q psy10348        167 TRDIHRNYVDCVRWLGD-----FVLS---KSCENCIICWKPGRLEDKELRTNETNVTIINR-LNFKDCEIWFIRFSMDYW  237 (291)
Q Consensus       167 ~~~~~~~~v~~~~~~~~-----~l~~---~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~  237 (291)
                      .+++|.+....+...|+     +++.   +...+.+++.++...........   .+.+.- +......-.-+++..++.
T Consensus       190 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~---kk~vdi~fppea~~DFPvamqvs~k  266 (327)
T d1utca2         190 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP---KKAVDVFFPPEAQNDFPVAMQISEK  266 (327)
T ss_dssp             EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCC---CEEEECCCCTTCTTCCEEEEEEETT
T ss_pred             cccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCc---ceeEEEECCccccCCcEEEEEeecc
Confidence            11223222222222211     1111   23457899999876432100000   011111 111111112234555566


Q ss_pred             CcEEEEEcCCCcEEEEEcCCCCC
Q psy10348        238 QKILAVGNQSGRTYVWDLDVQDP  260 (291)
Q Consensus       238 ~~~l~~~~~dg~i~vwd~~~~~~  260 (291)
                      -..++.-+.-|.|.+||++++.+
T Consensus       267 ygiiyviTK~G~i~lyDleTgt~  289 (327)
T d1utca2         267 HDVVFLITKYGYIHLYDLETGTC  289 (327)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCE
T ss_pred             CCEEEEEecCcEEEEEEcccccE
Confidence            78899999999999999999963

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.19  E-value=0.027  Score=42.96  Aligned_cols=110  Identities=13%  Similarity=0.064  Sum_probs=67.8

Q ss_pred             EEEEecCCCeEEEEccCCcceeEEEeeec---------------------------------------ccee--EEEEec
Q psy10348         28 LLAVAGSRAVIRIFSPAFHACVRHFYGHG---------------------------------------HAIN--ELKFHP   66 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~---------------------------------------~~v~--~~~~~~   66 (291)
                      .+.+|+..|.|+|+-+.+++.++.+.-.+                                       +...  .+.+..
T Consensus        15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~Td   94 (459)
T d1fwxa2          15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE   94 (459)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEET
T ss_pred             EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccC
Confidence            46778899999999999988877653110                                       0111  222221


Q ss_pred             --CCCcEEEEee-cCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc--CCCEEEEEecCC-----------------
Q psy10348         67 --QDFNLLLSVS-KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL--LGTKIMSCGMDH-----------------  124 (291)
Q Consensus        67 --~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~-----------------  124 (291)
                        .||++++... .+.+|.+-|+++.+..+.+.  ......+..+...+  +-.+++.++.+.                 
T Consensus        95 GtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~--iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~  172 (459)
T d1fwxa2          95 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILE--IPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV  172 (459)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEE--CSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EE
T ss_pred             CccceeEEEEEcCCCceEEEEECcceeeeEEEe--cCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcc
Confidence              1466666654 67889999999888766542  23445566666654  445777766532                 


Q ss_pred             -cEEEEeccCchhhhh
Q psy10348        125 -SLKLWDLTKPEIKDA  139 (291)
Q Consensus       125 -~i~v~d~~~~~~~~~  139 (291)
                       .+.++|..+.+....
T Consensus       173 ~~~t~ID~~tm~V~~Q  188 (459)
T d1fwxa2         173 NVFTAVDADKWEVAWQ  188 (459)
T ss_dssp             EEEEEEETTTTEEEEE
T ss_pred             eEEEEEecCCceEEEE
Confidence             255677776665443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.00  E-value=0.046  Score=43.90  Aligned_cols=60  Identities=13%  Similarity=0.089  Sum_probs=38.9

Q ss_pred             CeEEEEccCCcceeEEEeeecccee-----------EEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         36 AVIRIFSPAFHACVRHFYGHGHAIN-----------ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        36 g~i~vw~~~~~~~~~~~~~~~~~v~-----------~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      ..|.-.|+++++....++.....+.           .+.........++.+..+|.+.++|..+|+.+...
T Consensus       270 ~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~  340 (560)
T d1kv9a2         270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE  340 (560)
T ss_dssp             TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred             eeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccc
Confidence            4577778899998877764322221           12211111246777899999999999999877554

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.84  E-value=0.081  Score=42.55  Aligned_cols=102  Identities=13%  Similarity=0.127  Sum_probs=63.5

Q ss_pred             CCeEEEEccCCcceeEEEeeec-------------------------------------cce-eEEEEecCCCcEEEEee
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHG-------------------------------------HAI-NELKFHPQDFNLLLSVS   76 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~-------------------------------------~~v-~~~~~~~~~~~~l~s~~   76 (291)
                      +|.|+-+|+.+|+.+..+....                                     ..+ ...++.+ ...+++.+.
T Consensus       175 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~-~~g~~y~~t  253 (571)
T d2ad6a1         175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGS  253 (571)
T ss_dssp             CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEEC
T ss_pred             cCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccch-hcCeeeeec
Confidence            6789999999999988765221                                     111 2245555 444444433


Q ss_pred             c----------------CCeEEEEECCCcceeeeeccccCCC-------CceEEEEEccCCC---EEEEEecCCcEEEEe
Q psy10348         77 K----------------DHTLRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLGT---KIMSCGMDHSLKLWD  130 (291)
Q Consensus        77 ~----------------dg~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~l~~~~~d~~i~v~d  130 (291)
                      .                ...+.-.|+++|+.+..++.. .|.       ..........+++   .++.++.+|.+.++|
T Consensus       254 g~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~-~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlD  332 (571)
T d2ad6a1         254 GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKT-PHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLN  332 (571)
T ss_dssp             CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESS-TTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEE
T ss_pred             ccccCccccccccccccccceeeeeccchhheeccccc-CccccccccccccceeeeeccCccccceeeccccceEEEEe
Confidence            2                245777899999988777421 121       1112222233443   467788899999999


Q ss_pred             ccCchhhh
Q psy10348        131 LTKPEIKD  138 (291)
Q Consensus       131 ~~~~~~~~  138 (291)
                      ..+++.+.
T Consensus       333 r~tG~~i~  340 (571)
T d2ad6a1         333 RENGNLIV  340 (571)
T ss_dssp             TTTCCEEE
T ss_pred             cCCCcEee
Confidence            99998764

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.75  E-value=0.012  Score=44.75  Aligned_cols=70  Identities=20%  Similarity=0.191  Sum_probs=46.1

Q ss_pred             cCCCcEEEEeecCC-----------eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC-CcEEEEeccC
Q psy10348         66 PQDFNLLLSVSKDH-----------TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-HSLKLWDLTK  133 (291)
Q Consensus        66 ~~~~~~l~s~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~v~d~~~  133 (291)
                      +.++++++.|+.+.           .+.+||..+++..........+.......++.+++++++.|+.+ ..+.+||..+
T Consensus        28 ~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~  107 (387)
T d1k3ia3          28 PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS  107 (387)
T ss_dssp             TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred             eeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCcc
Confidence            33777777776421           36789999876433211012344444566788999998888765 5799999887


Q ss_pred             ch
Q psy10348        134 PE  135 (291)
Q Consensus       134 ~~  135 (291)
                      ..
T Consensus       108 ~~  109 (387)
T d1k3ia3         108 DS  109 (387)
T ss_dssp             TE
T ss_pred             Cc
Confidence            65

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.66  E-value=0.076  Score=42.73  Aligned_cols=59  Identities=10%  Similarity=0.062  Sum_probs=36.5

Q ss_pred             eEEEEccCCcceeEEEeeecc---------ceeEEEEec--CCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348         37 VIRIFSPAFHACVRHFYGHGH---------AINELKFHP--QDFNLLLSVSKDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        37 ~i~vw~~~~~~~~~~~~~~~~---------~v~~~~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~   95 (291)
                      .|.-.|+++++....++....         +........  .....++.++.+|.+.++|..+|+.+...
T Consensus       284 svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~  353 (573)
T d1kb0a2         284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK  353 (573)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred             eEEEecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccc
Confidence            466677778877666653221         111112222  11246777889999999999999877654

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.59  E-value=0.023  Score=45.93  Aligned_cols=24  Identities=8%  Similarity=0.273  Sum_probs=21.4

Q ss_pred             cCCEEEEecCCCeEEEecCCCCCc
Q psy10348        181 LGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       181 ~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      .+.++++|+.||.++.+|..+++.
T Consensus       496 agglVF~Gt~dg~l~A~Da~TGe~  519 (582)
T d1flga_         496 AGNLVFTGTGDGYFKAFDAKSGKE  519 (582)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cCCeEEEeCCCCeEEEEECCCCcE
Confidence            377888999999999999999966

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.071  Score=38.15  Aligned_cols=160  Identities=9%  Similarity=-0.052  Sum_probs=94.6

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEe-ecCCeEEEEECCCcc
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV-SKDHTLRLWNIKTDI   90 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~   90 (291)
                      .+..+++.+...   .+..+-...+.|.+.+++.......+.........+++.|..+.++.+- +..+.|.-.++....
T Consensus        78 ~p~glAvD~~~~---~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~  154 (266)
T d1ijqa1          78 APDGLAVDWIHS---NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (266)
T ss_dssp             CCCEEEEETTTT---EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CcceEEEeeccc---eEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc
Confidence            344566655442   3555556678899999875554444444456678999999555555553 234567777776433


Q ss_pred             eeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348         91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD  169 (291)
Q Consensus        91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (291)
                      .....   ...-.....+++.+.++.|+.+ ...+.|...++..........                          ..
T Consensus       155 ~~~l~---~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~--------------------------~~  205 (266)
T d1ijqa1         155 IYSLV---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE--------------------------DE  205 (266)
T ss_dssp             EEEEE---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE--------------------------CT
T ss_pred             eeccc---ccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEe--------------------------CC
Confidence            33333   2334567899999988877766 446788888886543211110                          00


Q ss_pred             ccCcceeEEEEcCCEEEEe-cCCCeEEEecCCCCC
Q psy10348        170 IHRNYVDCVRWLGDFVLSK-SCENCIICWKPGRLE  203 (291)
Q Consensus       170 ~~~~~v~~~~~~~~~l~~~-~~d~~i~iwd~~~~~  203 (291)
                      ........++..++.|+.. ..++.|...+..++.
T Consensus       206 ~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g~  240 (266)
T d1ijqa1         206 KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  240 (266)
T ss_dssp             TTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             CcccccEEEEEECCEEEEEECCCCeEEEEECCCCc
Confidence            0122245677765555444 456788777766554

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.075  Score=38.02  Aligned_cols=204  Identities=9%  Similarity=-0.091  Sum_probs=110.7

Q ss_pred             cceeEEEEeeeccCCCCCEEEEe-cCCCeEEEEccCCcc----eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348         10 EENFYTCAWSMDLESGRPLLAVA-GSRAVIRIFSPAFHA----CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW   84 (291)
Q Consensus        10 ~~~i~~~~~s~~~~~~~~~l~~~-~~dg~i~vw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw   84 (291)
                      ...+.++.|.+..+    .|... ..++.|.-.++....    ....+......+..|++.+..+++..+-...+.|.+.
T Consensus        29 ~~~~~~id~d~~~~----~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~  104 (266)
T d1ijqa1          29 LRNVVALDTEVASN----RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA  104 (266)
T ss_dssp             CSSEEEEEEETTTT----EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CCceEEEEEEeCCC----EEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeE
Confidence            34556777776653    44443 455666666554211    1122222234567888887455666666667889999


Q ss_pred             ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348         85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF  162 (291)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
                      ++........+   .........++.+|...+|+....  .+.|.-.++..........                     
T Consensus       105 ~~~g~~~~~~~---~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~---------------------  160 (266)
T d1ijqa1         105 DTKGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---------------------  160 (266)
T ss_dssp             ETTSSSEEEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC---------------------
T ss_pred             ecCCceEEEEE---cCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccc---------------------
Confidence            99865544444   344566789999987666665543  3445555554332111100                     


Q ss_pred             cccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348        163 PQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK  239 (291)
Q Consensus       163 ~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  239 (291)
                             ..-.....++++  ++.| .+-...+.|...++.....          ..+..........  ..++.. ++.
T Consensus       161 -------~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~----------~~~~~~~~~~~~p--~~lav~-~~~  220 (266)
T d1ijqa1         161 -------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHP--FSLAVF-EDK  220 (266)
T ss_dssp             -------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEECTTTTSSE--EEEEEE-TTE
T ss_pred             -------cccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE----------EEEEeCCCccccc--EEEEEE-CCE
Confidence                   012334567776  4444 4445678888888865433          1122222111112  234444 134


Q ss_pred             EEEEEcCCCcEEEEEcCCCCCC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQDPS  261 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~~~~  261 (291)
                      +..+-..++.|...+..+++..
T Consensus       221 ly~td~~~~~I~~~~~~~g~~~  242 (266)
T d1ijqa1         221 VFWTDIINEAIFSANRLTGSDV  242 (266)
T ss_dssp             EEEEETTTTEEEEEETTTCCCC
T ss_pred             EEEEECCCCeEEEEECCCCcce
Confidence            4444457788988898887643

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.48  E-value=0.01  Score=48.01  Aligned_cols=59  Identities=12%  Similarity=0.065  Sum_probs=40.4

Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      |.+.-||+.+|+.+....    ...+...-..+-.+.++++|+.||.++.+|.++++.+.++.
T Consensus       457 G~l~AiD~~tGk~~W~~~----~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~  515 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVE----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP  515 (573)
T ss_dssp             EEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccEEEeCCCCCceEeeec----CCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEE
Confidence            356677888777776652    11121111223357788899999999999999999887654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.46  E-value=0.083  Score=37.72  Aligned_cols=159  Identities=9%  Similarity=-0.035  Sum_probs=92.6

Q ss_pred             ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEECCC
Q psy10348         11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWNIKT   88 (291)
Q Consensus        11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~   88 (291)
                      ..+.++++..-..   .+..+-...+.|.+.+++.......+...-.....+++.|..+.++.+-...+  .|.--++..
T Consensus        79 ~~p~~iAvD~~~~---~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG  155 (263)
T d1npea_          79 GSPEGIALDHLGR---TIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG  155 (263)
T ss_dssp             CCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred             ccccEEEEeccCC---eEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCC
Confidence            4566777765442   34555566788999988754432223333356789999995555555533223  344445553


Q ss_pred             cceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348         89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST  167 (291)
Q Consensus        89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (291)
                      .......   ...-.....+++.+.++.|+.+. ..+.|...|+........+.                          
T Consensus       156 ~~~~~i~---~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~--------------------------  206 (263)
T d1npea_         156 TNRRILA---QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--------------------------  206 (263)
T ss_dssp             CCCEEEE---CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--------------------------
T ss_pred             CCceeee---eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEEC--------------------------
Confidence            3333322   23335668999998888776664 46788888886554321111                          


Q ss_pred             ccccCcceeEEEEcCCEE-EEecCCCeEEEecCCCCCc
Q psy10348        168 RDIHRNYVDCVRWLGDFV-LSKSCENCIICWKPGRLED  204 (291)
Q Consensus       168 ~~~~~~~v~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~  204 (291)
                        +-. ....+++.++.| .+-...+.|...|..+++.
T Consensus       207 --~~~-~P~~lav~~~~lYwtd~~~~~I~~~~~~~g~~  241 (263)
T d1npea_         207 --GLQ-YPFAVTSYGKNLYYTDWKTNSVIAMDLAISKE  241 (263)
T ss_dssp             --CCC-SEEEEEEETTEEEEEETTTTEEEEEETTTTEE
T ss_pred             --CCC-CcEEEEEECCEEEEEECCCCEEEEEECCCCcc
Confidence              011 124677665555 4444678888888877643

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.38  E-value=0.0087  Score=48.27  Aligned_cols=59  Identities=8%  Similarity=0.015  Sum_probs=42.3

Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      |.+.-||+.+++.+....    ...+...-...-.+.+++.|+.||.++.+|.++++.+.++.
T Consensus       438 G~l~A~D~~tGk~~W~~~----~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~  496 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVP----YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE  496 (560)
T ss_dssp             EEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cceEEEeCCCCeEeeecc----CCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEE
Confidence            567888999888877652    22222222233457788899999999999999999886654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.18  E-value=0.015  Score=46.96  Aligned_cols=59  Identities=12%  Similarity=-0.005  Sum_probs=39.8

Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      |.|.-+|+.+|+.+....    ...+..+-.....+.++++|+.||.++.+|.++++.+.++.
T Consensus       444 G~l~AiD~~TG~~~W~~~----~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~  502 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKW----EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK  502 (571)
T ss_dssp             EEEEEECTTTCCEEEEEE----ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccEEEeccCCCceeeEcC----CCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence            457777888888776652    11111111122346688889999999999999999886654

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.88  E-value=0.21  Score=37.11  Aligned_cols=197  Identities=12%  Similarity=0.109  Sum_probs=106.6

Q ss_pred             CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEec-----CCCcEEEEeec--C--CeEEEEECCC-cceeeeec
Q psy10348         27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP-----QDFNLLLSVSK--D--HTLRLWNIKT-DICIAIFG   96 (291)
Q Consensus        27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~l~s~~~--d--g~i~vwd~~~-~~~~~~~~   96 (291)
                      .+++.....+-|++||++ |+.++.+.  .+.++.+..-.     ....-++.++.  +  -+|.+|.+.. ...+..+.
T Consensus        41 SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~  117 (353)
T d1h6la_          41 SKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSIT  117 (353)
T ss_dssp             CEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECS
T ss_pred             cEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccccc
Confidence            477777777789999986 88877664  34555554431     02223444442  2  2577887752 22333331


Q ss_pred             cc----cCCCCceEEEEE--ccC-CC-EEEEEecCCcEEEEeccCch---hhhhhccccccCCCCccccccCccccCccc
Q psy10348         97 GV----EGHRDEVLSADF--DLL-GT-KIMSCGMDHSLKLWDLTKPE---IKDACAESYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        97 ~~----~~~~~~i~~~~~--~~~-~~-~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                      ..    ..-...++.+|+  ++. +. +++....+|.+..|.+....   ........+                     
T Consensus       118 ~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f---------------------  176 (353)
T d1h6la_         118 DPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAF---------------------  176 (353)
T ss_dssp             CSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEE---------------------
T ss_pred             ccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeecc---------------------
Confidence            10    011224666666  654 44 56667778999988874322   111111100                     


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--CcccEEEEEEEecCC--Cc
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--KDCEIWFIRFSMDYW--QK  239 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~--~~  239 (291)
                          .-...+..+.++  .+.|+.+-++..|..++.......       ....+....+  ....+..+++-...+  |-
T Consensus       177 ----~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~-------~~~~i~~~~g~~l~~D~EGlaiy~~~~~~Gy  245 (353)
T d1h6la_         177 ----KMNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGS-------NGTVIDRADGRHLTPDIEGLTIYYAADGKGY  245 (353)
T ss_dssp             ----ECSSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCS-------CCEEEEECSSSSCCSCEEEEEEEECGGGCEE
T ss_pred             ----CCCCccceEEEeCCCCcEEEecCccceEEEEeccCCCc-------cceeeecccCccccCCccccEEEEcCCCCeE
Confidence                023457778887  568888888777766655322110       0122222222  234555666554433  34


Q ss_pred             EEEEEcCCCcEEEEEcCCC
Q psy10348        240 ILAVGNQSGRTYVWDLDVQ  258 (291)
Q Consensus       240 ~l~~~~~dg~i~vwd~~~~  258 (291)
                      +|++.-.+++..+||....
T Consensus       246 livSsQG~n~f~vydr~~~  264 (353)
T d1h6la_         246 LLASSQGNSSYAIYERQGQ  264 (353)
T ss_dssp             EEEEEGGGTEEEEEESSTT
T ss_pred             EEEEcCCCCeEEEEecCCC
Confidence            4455557889999999774

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.70  E-value=0.028  Score=45.54  Aligned_cols=59  Identities=15%  Similarity=0.028  Sum_probs=41.4

Q ss_pred             CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348         79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA  141 (291)
Q Consensus        79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  141 (291)
                      |.|.-||+.+++.+....    +..++..-..+..+.+++.|+.||.++.+|.++++.+.++.
T Consensus       453 G~l~A~D~~TG~~~W~~~----~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~  511 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKM----ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFK  511 (596)
T ss_dssp             EEEEEECTTTCCEEEEEE----ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ceEEEEeCCCCceecccC----CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEE
Confidence            567778888888776542    22222222233457788889999999999999999887654

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.52  E-value=0.45  Score=38.29  Aligned_cols=110  Identities=15%  Similarity=0.111  Sum_probs=67.8

Q ss_pred             EEEEecC------CCeEEEEccCCcceeEEEeeec-------------------------------------c-ceeEEE
Q psy10348         28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHG-------------------------------------H-AINELK   63 (291)
Q Consensus        28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~-------------------------------------~-~v~~~~   63 (291)
                      .++++..      .|.|+-+|+++|+++.++....                                     . .-..+.
T Consensus       168 ~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s  247 (596)
T d1w6sa_         168 KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYA  247 (596)
T ss_dssp             EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred             eEEEeeccccccccCceEEEECCCCcEEEEeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccc
Confidence            5566543      4899999999999998765211                                     0 112345


Q ss_pred             EecCCCcEEEEeec----------------CCeEEEEECCCcceeeeeccccCCCC-------ceEEEEE-ccCCC---E
Q psy10348         64 FHPQDFNLLLSVSK----------------DHTLRLWNIKTDICIAIFGGVEGHRD-------EVLSADF-DLLGT---K  116 (291)
Q Consensus        64 ~~~~~~~~l~s~~~----------------dg~i~vwd~~~~~~~~~~~~~~~~~~-------~i~~~~~-~~~~~---~  116 (291)
                      +.+ ...++..+..                ...|.-.|+++|+.+..++. ..|..       ....+.. ..+|+   .
T Consensus       248 ~D~-~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~-~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~  325 (596)
T d1w6sa_         248 YDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK-TPHDEWDYAGVNVMMLSEQKDKDGKARKL  325 (596)
T ss_dssp             EET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES-STTCSSCCCCCCCCEEEEEECTTSCEEEE
T ss_pred             ccc-CCCeeecccccccccccccccccccccccccccccccccccccccc-eeccccCCccccceeeeeccccccccccc
Confidence            555 4444444322                23577789999998887642 12221       1222222 23443   6


Q ss_pred             EEEEecCCcEEEEeccCchhhhh
Q psy10348        117 IMSCGMDHSLKLWDLTKPEIKDA  139 (291)
Q Consensus       117 l~~~~~d~~i~v~d~~~~~~~~~  139 (291)
                      ++.+..+|.+.++|..+++.+..
T Consensus       326 v~~~~k~G~~~vlDr~tG~~i~~  348 (596)
T d1w6sa_         326 LTHPDRNGIVYTLDRTDGALVSA  348 (596)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEE
T ss_pred             eeccccccceeeecCCCCceeee
Confidence            77888899999999999987643

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.34  E-value=0.35  Score=35.95  Aligned_cols=64  Identities=11%  Similarity=0.054  Sum_probs=37.7

Q ss_pred             EEEEEEEecCC-Cc-EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348        227 IWFIRFSMDYW-QK-ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL  290 (291)
Q Consensus       227 i~~~~~~~~~~-~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  290 (291)
                      ++.+|+..++. +. ++++...+|.+..|.+.....................+.+|.+.++...|.
T Consensus       130 vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~Ly  195 (353)
T d1h6la_         130 VYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLY  195 (353)
T ss_dssp             CCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred             ceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEE
Confidence            55677766654 43 667778899999998854332111112222222335778888888766553

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.25  E-value=0.16  Score=40.90  Aligned_cols=81  Identities=14%  Similarity=0.100  Sum_probs=55.0

Q ss_pred             CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC
Q psy10348         35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG  114 (291)
Q Consensus        35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  114 (291)
                      .|.|.-+|+.+|+.+.+...+ .++..-..+. .+.++++|+.||.++.+|.++|+.+..+..-.+.....  +.|..+|
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~-~p~~~g~lst-agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P--~ty~~~G  540 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP--ITWEQDG  540 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEES-SCCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETT
T ss_pred             CCeEEEEcCCCCcEEeecCCC-CCCccceeEE-cCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccC--EEEEECC
Confidence            377889999999988877643 3333222333 56788889999999999999999998875222222222  4566688


Q ss_pred             C-EEEE
Q psy10348        115 T-KIMS  119 (291)
Q Consensus       115 ~-~l~~  119 (291)
                      + +++.
T Consensus       541 ~qYv~i  546 (582)
T d1flga_         541 EQYLGV  546 (582)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            6 4443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.62  E-value=1.1  Score=34.20  Aligned_cols=112  Identities=13%  Similarity=0.026  Sum_probs=64.2

Q ss_pred             EEEEeeeccCCCCCEEEEec-C----CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-----------
Q psy10348         14 YTCAWSMDLESGRPLLAVAG-S----RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-----------   77 (291)
Q Consensus        14 ~~~~~s~~~~~~~~~l~~~~-~----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----------   77 (291)
                      ...++||++    +++|.+- .    .-.++++|+++++.+...-. ......++|.+ ++..|+-...           
T Consensus       128 ~~~~~Spd~----~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~-D~~~~~Y~~~~~~~~~~~~~~  201 (430)
T d1qfma1         128 RGYAFSEDG----EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTE  201 (430)
T ss_dssp             EEEEECTTS----SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECT-TSSEEEEEECCCCSSCCSSSC
T ss_pred             cceEecCCC----CEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcC-CCCEEEEEEeccccCcccccc
Confidence            345667777    4766542 2    24799999999987643221 12235789999 6665543322           


Q ss_pred             -----CCeEEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEecc
Q psy10348         78 -----DHTLRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLT  132 (291)
Q Consensus        78 -----dg~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~  132 (291)
                           ...|..|.+.+...  ...+.. ......+..+..++++++++....   +....+|-+.
T Consensus       202 ~~~~~~~~v~~h~lgt~~~~d~~v~~e-~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d  265 (430)
T d1qfma1         202 TSTNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD  265 (430)
T ss_dssp             CCCCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred             cccCCcceEEEEECCCCcccccccccc-ccCCceEEeeeccCCcceeeEEeeccCCccEEEEEee
Confidence                 12577888776532  233310 122345667888999998764332   3444555443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.33  E-value=1.1  Score=33.49  Aligned_cols=100  Identities=12%  Similarity=0.074  Sum_probs=64.0

Q ss_pred             eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348         12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC   91 (291)
Q Consensus        12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~   91 (291)
                      .|..++|+.+      .|++. .++.+..++...-........-..++..+.++|   ..++....+|.+.++++..+..
T Consensus        88 ~v~~vafs~d------~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p---~~~~l~~~~~~~~~~~l~~~~~  157 (381)
T d1xipa_          88 DVIFVCFHGD------QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN---NTLVILNSVNDLSALDLRTKST  157 (381)
T ss_dssp             TEEEEEEETT------EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCE
T ss_pred             CeEEEEeeCC------EEEEE-eCCCEEEEEeeccccccccccccccccceecCC---ceeEEEecCCCEEEEEeccCcc
Confidence            5788888754      34444 345677787765544444444556788888887   3566667789999999987754


Q ss_pred             eeeeccc--cCCCCceEEEEEccCCCEEEEEe
Q psy10348         92 IAIFGGV--EGHRDEVLSADFDLLGTKIMSCG  121 (291)
Q Consensus        92 ~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~  121 (291)
                      .......  ..-...+.+++|++.|..++++.
T Consensus       158 ~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         158 KQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             EEEEESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             ccccCCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            3322000  11235677888887777777764

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.30  E-value=1.1  Score=33.46  Aligned_cols=111  Identities=10%  Similarity=0.060  Sum_probs=66.9

Q ss_pred             cceeEEEEecCCCcEEEEeecCCeEEEEECCC----------cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcE
Q psy10348         57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKT----------DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL  126 (291)
Q Consensus        57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  126 (291)
                      ....-++.++ ...+++.|+.++ ++|-.++.          +.....    ...-..|..++|+.+  .|+.. .++.+
T Consensus        37 ~~~~LLAVsn-~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~----~~~ip~v~~vafs~d--~l~v~-~~~~l  107 (381)
T d1xipa_          37 ASLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW----EKEIPDVIFVCFHGD--QVLVS-TRNAL  107 (381)
T ss_dssp             SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE----EEECTTEEEEEEETT--EEEEE-ESSEE
T ss_pred             cccceEEEeC-CCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCccee----ccCCCCeEEEEeeCC--EEEEE-eCCCE
Confidence            4567788888 666788777775 66665321          111110    111235888999744  45554 35667


Q ss_pred             EEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCc
Q psy10348        127 KLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       127 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                      ..++..........                            ..-..++..+.+++..++....++.+-++++.....
T Consensus       108 ~~~~~~~l~~~~~~----------------------------~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~  157 (381)
T d1xipa_         108 YSLDLEELSEFRTV----------------------------TSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST  157 (381)
T ss_dssp             EEEESSSTTCEEEE----------------------------EECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE
T ss_pred             EEEEeecccccccc----------------------------ccccccccceecCCceeEEEecCCCEEEEEeccCcc
Confidence            77776553311110                            012345777888877777788899999999887653

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.39  E-value=1.5  Score=32.33  Aligned_cols=54  Identities=11%  Similarity=0.159  Sum_probs=31.3

Q ss_pred             EEecCCCcEEEEE-cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCcee
Q psy10348        232 FSMDYWQKILAVG-NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVL  289 (291)
Q Consensus       232 ~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l  289 (291)
                      ++.+||+++|+++ +..++|++|++....... ......   ..+.+-.+.+.+ +|.+.
T Consensus       211 I~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~-~~~~~~---l~~~pDNi~~d~~~g~lw  266 (340)
T d1v04a_         211 INISPDGKYVYIAELLAHKIHVYEKHANWTLT-PLRVLS---FDTLVDNISVDPVTGDLW  266 (340)
T ss_dssp             EEECTTSSEEEEEEGGGTEEEEEEECTTSCEE-EEEEEE---CSSEEEEEEECTTTCCEE
T ss_pred             eEECCCCCEEEEEeCCCCeEEEEEeCCCcccc-eEEEec---CCCCCCccEEecCCCEEE
Confidence            4556778877665 467899999998654321 111221   224555677765 45443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.15  E-value=0.87  Score=34.77  Aligned_cols=37  Identities=8%  Similarity=-0.000  Sum_probs=26.0

Q ss_pred             CCCceEEEEEccCCCEEEEE-ecCC----cEEEEeccCchhh
Q psy10348        101 HRDEVLSADFDLLGTKIMSC-GMDH----SLKLWDLTKPEIK  137 (291)
Q Consensus       101 ~~~~i~~~~~~~~~~~l~~~-~~d~----~i~v~d~~~~~~~  137 (291)
                      +.-.+..++++|++++++.+ +.+|    .++++|+.+++.+
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~  164 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL  164 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceec
Confidence            33345567889999988754 2233    5999999999854

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=1.7  Score=30.57  Aligned_cols=23  Identities=22%  Similarity=0.385  Sum_probs=16.8

Q ss_pred             CCcEEEEEcCCC-----cEEEEEcCCCC
Q psy10348        237 WQKILAVGNQSG-----RTYVWDLDVQD  259 (291)
Q Consensus       237 ~~~~l~~~~~dg-----~i~vwd~~~~~  259 (291)
                      ++++++.|+.++     .|.+||+.+.+
T Consensus       242 ~~~l~v~GG~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         242 QGRIYVLGGYDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCEEEEEecCCCCeecceEEEEECCCCE
Confidence            378888887554     37889998763

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.44  E-value=3.5  Score=31.55  Aligned_cols=35  Identities=0%  Similarity=-0.158  Sum_probs=27.7

Q ss_pred             CCceEEEEEccCCCEEEEEecCCcEEEEeccCchh
Q psy10348        102 RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI  136 (291)
Q Consensus       102 ~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~  136 (291)
                      -...++++|.|++++|++--..|.|++++..+++.
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~   60 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSV   60 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcE
Confidence            34667999999999887765579999998777653

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=84.10  E-value=4.6  Score=27.39  Aligned_cols=142  Identities=11%  Similarity=0.124  Sum_probs=74.6

Q ss_pred             CCCcEEEEeecCCeEEEEECCCcceeeeeccccCC-------CCceEEEEE-ccCCCEEEEEec-CCcEEEEeccCchhh
Q psy10348         67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH-------RDEVLSADF-DLLGTKIMSCGM-DHSLKLWDLTKPEIK  137 (291)
Q Consensus        67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~i~~~~~-~~~~~~l~~~~~-d~~i~v~d~~~~~~~  137 (291)
                      ++.+..++|+......+|-++.|+..+ +..+.+.       ...|..+.+ .++.+-|+++.. .|.+++++...+.  
T Consensus       112 ddk~vvF~Gased~~~LYviegGklrk-L~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpkeGS--  188 (313)
T d2hu7a1         112 TGEAVVFTGATEDRVALYALDGGGLRE-LARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGS--  188 (313)
T ss_dssp             CSSCEEEEEECSSCEEEEEEETTEEEE-EEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSSEE--
T ss_pred             cCceEEEecccCCceEEEEEeCCceee-eccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecCCCCc--
Confidence            366788888887788888888665432 2221222       123333333 333334666665 7788888776665  


Q ss_pred             hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecC---CCeEEEecCCCCCccccccCCCc
Q psy10348        138 DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSC---ENCIICWKPGRLEDKELRTNETN  213 (291)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~  213 (291)
                                                           ++...+. |+.++++-.   +....-+|++.+.-..+....  
T Consensus       189 -------------------------------------~~~ay~~~gnKV~sdyEt~gEsywit~D~~s~~yerve~P~--  229 (313)
T d2hu7a1         189 -------------------------------------FSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPS--  229 (313)
T ss_dssp             -------------------------------------EEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEECCCSS--
T ss_pred             -------------------------------------ccceeEccCceeeeccCCCCceEEEEEecccCceeeeecCc--
Confidence                                                 3333333 454443322   222234577655422111100  


Q ss_pred             eeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348        214 VTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL  255 (291)
Q Consensus       214 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~  255 (291)
                       +.+..+.  ...|..  +-.+|++++++.+-.||.=+++.-
T Consensus       230 -kd~~sy~--p~~I~~--~~Y~Pdd~L~iiakrdG~s~lF~n  266 (313)
T d2hu7a1         230 -KDFSSYR--PTAITW--LGYLPDGRLAVVARREGRSAVFID  266 (313)
T ss_dssp             -CHHHHHC--CSEEEE--EEECTTSCEEEEEEETTEEEEEET
T ss_pred             -ccceeec--ceEEEe--eeeCCCCcEEEEEecCCchheeec
Confidence             0011111  112222  345788999999999999999874

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.52  E-value=6.7  Score=28.13  Aligned_cols=151  Identities=13%  Similarity=0.126  Sum_probs=87.8

Q ss_pred             EEEEecCCCeEEEEccCC-cceeEEEeeec----cceeEEEEecCCCcEEEEee-------cCCeEEEEECCCcceeeee
Q psy10348         28 LLAVAGSRAVIRIFSPAF-HACVRHFYGHG----HAINELKFHPQDFNLLLSVS-------KDHTLRLWNIKTDICIAIF   95 (291)
Q Consensus        28 ~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~-------~dg~i~vwd~~~~~~~~~~   95 (291)
                      .|+..+. ..|+-|+++. ..+.+.+..|.    ..|..-..++ +.++++..+       -.|.+.+|..+.+ .-+.+
T Consensus       115 ~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~i  191 (327)
T d1utca2         115 TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPI  191 (327)
T ss_dssp             EEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEE
T ss_pred             EEEEEcC-CceEEEcccCCCCchhhhhhcccccCceEEEEEECC-CCCEEEEEeEecCCCceeEEEEEEEeccC-cCccc
Confidence            5666654 4799999953 25677776664    3566666677 666655432       2377899998754 34444


Q ss_pred             ccccCCCCceEEEEEccCC---CEEEEEe---cCCcEEEEeccCchh-hhhhcc---ccccCCCCccccccCccccCccc
Q psy10348         96 GGVEGHRDEVLSADFDLLG---TKIMSCG---MDHSLKLWDLTKPEI-KDACAE---SYTFNPARSTRPFDTQKEHFPQF  165 (291)
Q Consensus        96 ~~~~~~~~~i~~~~~~~~~---~~l~~~~---~d~~i~v~d~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  165 (291)
                         .+|.+....+...-+.   +.|+.+.   ..+.+++.++..... ...+.+   .+.+.|+                
T Consensus       192 ---eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppe----------------  252 (327)
T d1utca2         192 ---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE----------------  252 (327)
T ss_dssp             ---CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTT----------------
T ss_pred             ---cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCcc----------------
Confidence               6776655555443221   1333332   236788888766321 111111   1222221                


Q ss_pred             ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCc
Q psy10348        166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLED  204 (291)
Q Consensus       166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~  204 (291)
                          ...+---++..+  .+.++.-+.-|.|.+||+.++..
T Consensus       253 ----a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~  289 (327)
T d1utca2         253 ----AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC  289 (327)
T ss_dssp             ----CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred             ----ccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccE
Confidence                122333455555  55778888999999999999865